RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EYA3 (Homo sapiens)

Ensembl gene IDs: ENSG00000158161

Ensembl transcript IDs: ENST00000373863.3, ENST00000373864.5, ENST00000373871.8, ENST00000436342.6, ENST00000468665.1, ENST00000471498.5, ENST00000495923.5, ENST00000540618.5

Found 782 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGGAGGGATGGGGCATCCAACAATCATGGCTGGGCTGGAAGGCTGTaGCTAGTGCCTGGGCACCCACCAATCTGCCCAGAGGTCGAGAGA +
Preference number: 1 (lower is better)
Translates to: WRDGASNNHGWAGRL*LVPGHPPICPEVER
Trigger: TCTCTCGACCTCTGGGCAGATTGGTGGGTGCCCAGGCACTAGTCACAGCCTTCCAGCCCAGCCATGATTGTTGGATGCCCCATCCCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR TCA 90 bp TGCTTGCGTGCATGGTGGGGGTACCACTCCGCAGCCTCACAAACCTaGAGCGCAGCACAACAGCCGTGGCCTTTGTCCAGGACAAAAACC +
Preference number: 1 (lower is better)
Translates to: CLRAWWGYHSAASQT*SAAQQPWPLSRTKT
Trigger: GGTTTTTGTCCTGGACAAAGGCCACGGCTGTTGTGCTGCGCTTCAGGTTTGTGAGGCTGCGGAGTGGTACCCCCACCATGCACGCAAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR CCA 90 bp GGCATCCAACAATCATGGCTGGGCTGGAAGGCTGTGACTAGTGCCTaGGCACCCACCAATCTGCCCAGAGGTCGAGAGATGCTCCTGCAT +
Preference number: 1 (lower is better)
Translates to: GIQQSWLGWKAVTSA*APTNLPRGREMLLH
Trigger: ATGCAGGAGCATCTCTCGACCTCTGGGCAGATTGGTGGGTGCCCAGGCACTAGTCACAGCCTTCCAGCCCAGCCATGATTGTTGGATGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR GCA 90 bp TCCCAAAAGGGTGGAGAGGGAAGTATCTGTGTGTGTGTGCTTGCGTaGATGGTGGGGGTACCACTCCGCAGCCTCACAAACCTGAAGCGC +
Preference number: 1 (lower is better)
Translates to: SQKGGEGSICVCVLA*MVGVPLRSLTNLKR
Trigger: GCGCTTCAGGTTTGTGAGGCTGCGGAGTGGTACCCCCACCATGCACGCAAGCACACACACACAGATACTTCCCTCTCCACCCTTTTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR TCA 90 bp AGTGCATTAGGAACTAGCCAAGGAGCCTTGCTTGCCAGAGCTGTCTaGCTCAGAGGAGAGGAAGGGACAGATGGCCTGCTGACTGGGGCT +
Preference number: 1 (lower is better)
Translates to: SALGTSQGALLARAV*LRGEEGTDGLLTGA
Trigger: AGCCCCAGTCAGCAGGCCATCTGTCCCTTCCTCTCCTCTGAGTCAGACAGCTCTGGCAAGCAAGGCTCCTTGGCTAGTTCCTAATGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR CCA 90 bp AAATTGCTCTTGGAGGGATGGGGCATCCAACAATCATGGCTGGGCTaGAAGGCTGTGACTAGTGCCTGGGCACCCACCAATCTGCCCAGA +
Preference number: 1 (lower is better)
Translates to: KLLLEGWGIQQSWLG*KAVTSAWAPTNLPR
Trigger: TCTGGGCAGATTGGTGGGTGCCCAGGCACTAGTCACAGCCTTCCAGCCCAGCCATGATTGTTGGATGCCCCATCCCTCCAAGAGCAATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR GCA 90 bp CATCTAAATCTGGAGCAGGTGTCCATTCTTCTGGACACTACCAGCTaGCCCAGGGGCACTGGACAGGGTGATGCTAAGGCACAGTCAGTT +
Preference number: 1 (lower is better)
Translates to: HLNLEQVSILLDTTS*PRGTGQGDAKAQSV
Trigger: AACTGACTGTGCCTTAGCATCACCCTGTCCAGTGCCCCTGGGGCAGCTGGTAGTGTCCAGAAGAATGGACACCTGCTCCAGATTTAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR TCA 90 bp TGGGAGAGGCTGAACTTCCTCAGCTCTAGGGAATTTTATCCTGCCTaGGTAGATGCCCAAATTGCTCTTGGAGGGATGGGGCATCCAACA +
Preference number: 1 (lower is better)
Translates to: WERLNFLSSREFYPA*VDAQIALGGMGHPT
Trigger: TGTTGGATGCCCCATCCCTCCAAGAGCAATTTGGGCATCTACTCAGGCAGGATAAAATTCCCTAGAGCTGAGGAAGTTCAGCCTCTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR GCA 90 bp ACTGTAGCTGCAGTGAGTCCATTGTTCTCTCTATCCAACTGTCCCTaGTTCTGTATGGAGATGAACACGGGGCTGCAGCTCACTCTTAGC +
Preference number: 1 (lower is better)
Translates to: TVAAVSPLFSLSNCP*FCMEMNTGLQLTLS
Trigger: GCTAAGAGTGAGCTGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAGAACAATGGACTCACTGCAGCTACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR GCA 90 bp CTATCTGGGTGGCCTGGCATTGGAAGGAGTCTTGCCTCTTTGTGCTaGAACATCTCTGGAAATGGGTATGCAGAATCTCTGGTGACAAGC +
Preference number: 1 (lower is better)
Translates to: LSGWPGIGRSLASLC*NISGNGYAESLVTS
Trigger: GCTTGTCACCAGAGATTCTGCATACCCATTTCCAGAGATGTTGCAGCACAAAGAGGCAAGACTCCTTCCAATGCCAGGCCACCCAGATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR GCA 90 bp CCTCTCTCTCTTGCTATCTGGGTGGCCTGGCATTGGAAGGAGTCTTaGCTCTTTGTGCTGCAACATCTCTGGAAATGGGTATGCAGAATC +
Preference number: 1 (lower is better)
Translates to: PLSLAIWVAWHWKES*LFVLQHLWKWVCRI
Trigger: GATTCTGCATACCCATTTCCAGAGATGTTGCAGCACAAAGAGGCAAGACTCCTTCCAATGCCAGGCCACCCAGATAGCAAGAGAGAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR CCA 90 bp AAGGAATGTGTATACCAGCCTCTCTCTCTTGCTATCTGGGTGGCCTaGCATTGGAAGGAGTCTTGCCTCTTTGTGCTGCAACATCTCTGG +
Preference number: 1 (lower is better)
Translates to: KECVYQPLSLAIWVA*HWKESCLFVLQHLW
Trigger: CCAGAGATGTTGCAGCACAAAGAGGCAAGACTCCTTCCAATGCCAGGCCACCCAGATAGCAAGAGAGAGAGGCTGGTATACACATTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR GCA 90 bp AACAATGCCTCCTTCTGCGGACCAATCCTGCATCTCAATCTGAGGTaGTTGTATCATCTCTCTCTGTGTAGCCTGGGAGAGGCTGAACTT +
Preference number: 1 (lower is better)
Translates to: NNASFCGPILHLNLR*LYHLSLCSLGEAEL
Trigger: AAGTTCAGCCTCTCCCAGGCTACACAGAGAGAGATGATACAAGCACCTCAGATTGAGATGCAGGATTGGTCCGCAGAAGGAGGCATTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR GCA 90 bp TTGCTATCTGGGTGGCCTGGCATTGGAAGGAGTCTTGCCTCTTTGTaGTGCAACATCTCTGGAAATGGGTATGCAGAATCTCTGGTGACA +
Preference number: 1 (lower is better)
Translates to: LLSGWPGIGRSLASL*CNISGNGYAESLVT
Trigger: TGTCACCAGAGATTCTGCATACCCATTTCCAGAGATGTTGCAGCACAAAGAGGCAAGACTCCTTCCAATGCCAGGCCACCCAGATAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR TCA 90 bp AGATCAACCATCAAACAAGGCAGAGCAGCATCTAGGCAACTATGCTaGATACAGACCAAGGGAAGGCCTACCTCACACTACATCTCCCTC +
Preference number: 1 (lower is better)
Translates to: RSTIKQGRAASRQLC*IQTKGRPTSHYISL
Trigger: GAGGGAGATGTAGTGTGAGGTAGGCCTTCCCTTGGTCTGTATTCAGCATAGTTGCCTAGATGCTGCTCTGCCTTGTTTGATGGTTGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR CCA 90 bp TCTGGAAATGGGTATGCAGAATCTCTGGTGACAAGCAATTATAGCTaGGGTTGGTCAACAATGCCTCCTTCTGCGGACCAATCCTGCATC +
Preference number: 1 (lower is better)
Translates to: SGNGYAESLVTSNYS*GWSTMPPSADQSCI
Trigger: GATGCAGGATTGGTCCGCAGAAGGAGGCATTGTTGACCAACCCCAGCTATAATTGCTTGTCACCAGAGATTCTGCATACCCATTTCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR TCA 90 bp ACGGGGCTGCAGCTCACTCTTAGCAAAAATTGCAGCTGTTGGTTCTaGTTGTGTTCTCGCCAGCATTCCATGGATAAAGACAGAGAGAGA +
Preference number: 1 (lower is better)
Translates to: TGLQLTLSKNCSCWF*LCSRQHSMDKDRER
Trigger: TCTCTCTCTGTCTTTATCCATGGAATGCTGGCGAGAACACAATCAGAACCAACAGCTGCAATTTTTGCTAAGAGTGAGCTGCAGCCCCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR TCA 90 bp GTCCATTGTTCTCTCTATCCAACTGTCCCTGCTTCTGTATGGAGATaGACACGGGGCTGCAGCTCACTCTTAGCAAAAATTGCAGCTGTT +
Preference number: 1 (lower is better)
Translates to: VHCSLYPTVPASVWR*TRGCSSLLAKIAAV
Trigger: AACAGCTGCAATTTTTGCTAAGAGTGAGCTGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAGAACAATGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR CCA 90 bp AAAATTGCAGCTGTTGGTTCTGATTGTGTTCTCGCCAGCATTCCATaGATAAAGACAGAGAGAGAGAGAGAGAGAGAGGCAGAGAGGGAG +
Preference number: 1 (lower is better)
Translates to: KIAAVGSDCVLASIP*IKTEREREREAERE
Trigger: CTCCCTCTCTGCCTCTCTCTCTCTCTCTCTCTCTGTCTTTATCCATGGAATGCTGGCGAGAACACAATCAGAACCAACAGCTGCAATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR CCA 90 bp GCTTTACAGAAGACAGGAACGCCGCAAATCAAACAAAAGCCCAGATaGGCATCTAAATCTGGAGCAGGTGTCCATTCTTCTGGACACTAC +
Preference number: 1 (lower is better)
Translates to: ALQKTGTPQIKQKPR*ASKSGAGVHSSGHY
Trigger: GTAGTGTCCAGAAGAATGGACACCTGCTCCAGATTTAGATGCCCATCTGGGCTTTTGTTTGATTTGCGGCGTTCCTGTCTTCTGTAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR GCA 90 bp AGGGAAAAGGGACTGGAAAGAAGACTAAGGCTTCTAGATGGGAAATaGCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACC +
Preference number: 1 (lower is better)
Translates to: REKGLERRLRLLDGK*QSLSYSVSSAPQFT
Trigger: GGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCCATCTAGAAGCCTTAGTCTTCTTTCCAGTCCCTTTTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR GCA 90 bp TTTTCAATGAGTTCTGAAGGAATGTGTATACCAGCCTCTCTCTCTTaGTATCTGGGTGGCCTGGCATTGGAAGGAGTCTTGCCTCTTTGT +
Preference number: 1 (lower is better)
Translates to: FSMSSEGMCIPASLS*YLGGLALEGVLPLC
Trigger: ACAAAGAGGCAAGACTCCTTCCAATGCCAGGCCACCCAGATAGCAAGAGAGAGAGGCTGGTATACACATTCCTTCAGAACTCATTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR GCA 90 bp GCTTCTAGATGGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTaGCCCACAGTTCACCAGCTAGGAGATAGAAGAACAGGAAAGGTA +
Preference number: 1 (lower is better)
Translates to: ASRWEMPKFKLLSVQ*PTVHQLGDRRTGKV
Trigger: TACCTTTCCTGTTCTTCTATCTCCTAGCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCCATCTAGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR GCA 90 bp AGCCACAAATGCCCGCAGTCACATAAATATATCCAATCCAATCAATaGCTTTTCCTGCTAACAGAGGCATCTGAAGTTCAGAGGGAGAGT +
Preference number: 1 (lower is better)
Translates to: SHKCPQSHKYIQSNQ*LFLLTEASEVQRES
Trigger: ACTCTCCCTCTGAACTTCAGATGCCTCTGTTAGCAGGAAAAGGCATTGATTGGATTGGATATATTTATGTGACTGCGGGCATTTGTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR TCA 90 bp AGACACTTTAGTTCCTTCTCTCCAGTTTGGAAGCTAAGCCTCCTGTaGTACAGTCTGAATGACAGTCAAGCTGAAGGAGTTTTTAGGGTT +
Preference number: 1 (lower is better)
Translates to: RHFSSFSPVWKLSLL*YSLNDSQAEGVFRV
Trigger: AACCCTAAAAACTCCTTCAGCTTGACTGTCATTCAGACTGTATCACAGGAGGCTTAGCTTCCAAACTGGAGAGAAGGAACTAAAGTGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR CCA 90 bp TCAGGCAGAGATCTGGGTAAATACATACCTGGGACATCCTTCATATaGCTTAGGGCTTCCACAAAGGAAGTCAAATACATTGGCAGTTTT +
Preference number: 1 (lower is better)
Translates to: SGRDLGKYIPGTSFI*LRASTKEVKYIGSF
Trigger: AAAACTGCCAATGTATTTGACTTCCTTTGTGGAAGCCCTAAGCCATATGAAGGATGTCCCAGGTATGTATTTACCCAGATCTCTGCCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR TCA 90 bp CCAGAGGTCGAGAGATGCTCCTGCATTTGGCCCAGGATTAAGTTTTGGGCCATGGGTGGGAGGATCGCTTaGGGCCAGGTGTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: PEVERCSCIWPRIKFWAMGGRIA*GQVFKT
Trigger: GGTCTTGAACACCTGGCCTCAAGCGATCCTCCCACC...CATGGCCCAAAACTTAATCCTGGGCCAAATGCAGGAGCATCTCTCGACCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CCA 90 bp GAGAGCCCTCACCGTGACATTACAGACCCATCCTGTAGAACCCACAGTGCCTGGGGCATCCAACAATCATaGCTGGGCTGGAAGGCTGTG +
Preference number: 2 (lower is better)
Translates to: ESPHRDITDPSCRTHSAWGIQQS*LGWKAV
Trigger: CACAGCCTTCCAGCCCAGCCATGATTGTTGGATGCC...CCAGGCACTGTGGGTTCTACAGGATGGGTCTGTAATGTCACGGTGAGGGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CCA 90 bp GAGGACTCTAATGAAGAGGGTCTCCCCCTTGATGAATGGACCCACAGTGTCCTTTGCTTGCGTGCATGGTaGGGGTACCACTCCGCAGCC +
Preference number: 2 (lower is better)
Translates to: EDSNEEGLPLDEWTHSVLCLRAW*GYHSAA
Trigger: GGCTGCGGAGTGGTACCCCCACCATGCACGCAAGCA...AAGGACACTGTGGGTCCATTCATCAAGGGGGAGACCCTCTTCATTAGAGTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR TCA 90 bp AAGCCACCTCCTCAACCCAAGACACACCTCACTCCAGATCTACTACTAGAGAGATGGGCTGGAAGGCTGTaGCTAGTGCCTGGGCACCCA +
Preference number: 2 (lower is better)
Translates to: KPPPQPKTHLTPDLLLERWAGRL*LVPGHP
Trigger: TGGGTGCCCAGGCACTAGTCACAGCCTTCCAGCCCA...TCTCTCTAGTAGTAGATCTGGAGTGAGGTGTGTCTTGGGTTGAGGAGGTGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CCA 90 bp GAGGAAGGGACAGATGGCCTGCTGACTGGGGCTGAGGCAGAACTAGATTTTCTCGCATCTGATGGGAAATaGGTGCTTCTCTGCAGGGGG +
Preference number: 2 (lower is better)
Translates to: EEGTDGLLTGAEAELDFLASDGK*VLLCRG
Trigger: CCCCCTGCAGAGAAGCACCCATTTCCCATCAGATGC...GAGAAAATCTAGTTCTGCCTCAGCCCCAGTCAGCAGGCCATCTGTCCCTTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CCA 90 bp GAGGAAGGGACAGATGGCCTGCTGACTGGGGCTGAGGCAGAACTAGATTTTCTCCAATCATGGCTGGGCTaGAAGGCTGTGACTAGTGCC +
Preference number: 2 (lower is better)
Translates to: EEGTDGLLTGAEAELDFLQSWLG*KAVTSA
Trigger: GGCACTAGTCACAGCCTTCCAGCCCAGCCATGATTG...GAGAAAATCTAGTTCTGCCTCAGCCCCAGTCAGCAGGCCATCTGTCCCTTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR TCA 90 bp CCAGAGGTCGAGAGATGCTCCTGCATTTGGCCCAGGATTAAGTTTTGGGCCATGAGCTCCCTTCAGGAGTaGAAAGGAGCTCAAGGGGAA +
Preference number: 2 (lower is better)
Translates to: PEVERCSCIWPRIKFWAMSSLQE*KGAQGE
Trigger: TTCCCCTTGAGCTCCTTTTCACTCCTGAAGGGAGCT...CATGGCCCAAAACTTAATCCTGGGCCAAATGCAGGAGCATCTCTCGACCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR GCA 90 bp GGGTGGAGAAAAAGGCAGGGTAATTACAGAGAGCACTGTGTTCCCTGGACAATTGGGCACCCACCAATCTaGCCAGAGGTCGAGAGATGC +
Preference number: 2 (lower is better)
Translates to: GWRKRQGNYREHCVPWTIGHPPI*PEVERC
Trigger: GCATCTCTCGACCTCTGGGCAGATTGGTGGGTGCCC...AATTGTCCAGGGAACACAGTGCTCTCTGTAATTACCCTGCCTTTTTCTCCACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR GCA 90 bp GAGGAAGGGACAGATGGCCTGCTGACTGGGGCTGAGGCAGAACTAGATTTTCTCAACAATGCCTCCTTCTaGGGACCAATCCTGCATCTC +
Preference number: 2 (lower is better)
Translates to: EEGTDGLLTGAEAELDFLNNASF*GPILHL
Trigger: GAGATGCAGGATTGGTCCGCAGAAGGAGGCATTGTT...GAGAAAATCTAGTTCTGCCTCAGCCCCAGTCAGCAGGCCATCTGTCCCTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CCA 90 bp GAGAGCCCTCACCGTGACATTACAGACCCATCCTGTAGAACCCACAGTGCCTGGGGGACATCCTTCATATaGCTTAGGGCTTCCACAAAG +
Preference number: 2 (lower is better)
Translates to: ESPHRDITDPSCRTHSAWGTSFI*LRASTK
Trigger: CTTTGTGGAAGCCCTAAGCCATATGAAGGATGTCCC...CCAGGCACTGTGGGTTCTACAGGATGGGTCTGTAATGTCACGGTGAGGGCTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CCA 90 bp GGGTGGAGAAAAAGGCAGGGTAATTACAGAGAGCACTGTGTTCCCTGGACAATTGTGTGCTTGCGTGCATaGTGGGGGTACCACTCCGCA +
Preference number: 2 (lower is better)
Translates to: GWRKRQGNYREHCVPWTIVCLRA*WGYHSA
Trigger: TGCGGAGTGGTACCCCCACCATGCACGCAAGCACAC...AATTGTCCAGGGAACACAGTGCTCTCTGTAATTACCCTGCCTTTTTCTCCACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CCA 90 bp GAGGAAGGGACAGATGGCCTGCTGACTGGGGCTGAGGCAGAACTAGATTTTCTCAAGCTCACCATTCCTTaGCCCAGACCATTGCTCTAC +
Preference number: 2 (lower is better)
Translates to: EEGTDGLLTGAEAELDFLKLTIP*PRPLLY
Trigger: GTAGAGCAATGGTCTGGGCCAAGGAATGGTGAGCTT...GAGAAAATCTAGTTCTGCCTCAGCCCCAGTCAGCAGGCCATCTGTCCCTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR TCA 90 bp GGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCGCTTCTGTATGGAGATaGACACGGGGCTGCAGCTCA +
Preference number: 2 (lower is better)
Translates to: GKCQSLSYSVSSAPQFTSASVWR*TRGCSS
Trigger: TGAGCTGCAGCCCCGTGTTCATCTCCATACAGAAGC...GCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR TCA 90 bp GAGGAAGGGACAGATGGCCTGCTGACTGGGGCTGAGGCAGAACTAGATTTTCTCGCCTTGGCAACAATGTaGAAACCTGTCTGTTTCTCC +
Preference number: 2 (lower is better)
Translates to: EEGTDGLLTGAEAELDFLALATM*KPVCFS
Trigger: GGAGAAACAGACAGGTTTTCACATTGTTGCCAAGGC...GAGAAAATCTAGTTCTGCCTCAGCCCCAGTCAGCAGGCCATCTGTCCCTTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CCA 90 bp CATGAGGACTCTAATGAAGAGGGTCTCCCCCTTGATGAATGGACCCACAGTGTCTGCCCAAATTGCTCTTaGAGGGATGGGGCATCCAAC +
Preference number: 2 (lower is better)
Translates to: HEDSNEEGLPLDEWTHSVCPNCS*RDGASN
Trigger: GTTGGATGCCCCATCCCTCCAAGAGCAATTTGGGCA...GACACTGTGGGTCCATTCATCAAGGGGGAGACCCTCTTCATTAGAGTCCTCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CCA 90 bp AAGCCACCTCCTCAACCCAAGACACACCTCACTCCAGATCTACTACTAGAGAGAGCTATCTGGGTGGCCTaGCATTGGAAGGAGTCTTGC +
Preference number: 2 (lower is better)
Translates to: KPPPQPKTHLTPDLLLERAIWVA*HWKESC
Trigger: GCAAGACTCCTTCCAATGCCAGGCCACCCAGATAGC...TCTCTCTAGTAGTAGATCTGGAGTGAGGTGTGTCTTGGGTTGAGGAGGTGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR CAA 90 bp AATGCCTCCTTCTGCGGACCAATCCTGCATCTCAATCTGAGGTGCTaGTATCATCTCTCTCTGTGTAGCCTGGGAGAGGCTGAACTTCCT +
Preference number: 2 (lower is better)
Translates to: NASFCGPILHLNLRC*YHLSLCSLGEAELP
Trigger: AGGAAGTTCAGCCTCTCCCAGGCTACACAGAGAGAGATGATACAAGCACCTCAGATTGAGATGCAGGATTGGTCCGCAGAAGGAGGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR CAA 90 bp CTCTTGCTATCTGGGTGGCCTGGCATTGGAAGGAGTCTTGCCTCTTaGTGCTGCAACATCTCTGGAAATGGGTATGCAGAATCTCTGGTG +
Preference number: 2 (lower is better)
Translates to: LLLSGWPGIGRSLAS*CCNISGNGYAESLV
Trigger: CACCAGAGATTCTGCATACCCATTTCCAGAGATGTTGCAGCACAAAGAGGCAAGACTCCTTCCAATGCCAGGCCACCCAGATAGCAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR CAA 90 bp GCCTCTCTCTCTTGCTATCTGGGTGGCCTGGCATTGGAAGGAGTCTaGCCTCTTTGTGCTGCAACATCTCTGGAAATGGGTATGCAGAAT +
Preference number: 2 (lower is better)
Translates to: ASLSCYLGGLALEGV*PLCAATSLEMGMQN
Trigger: ATTCTGCATACCCATTTCCAGAGATGTTGCAGCACAAAGAGGCAAGACTCCTTCCAATGCCAGGCCACCCAGATAGCAAGAGAGAGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR TCA 90 bp AAGCCACCTCCTCAACCCAAGACACACCTCACTCCAGATCTACTACTAGAGAGAAGCTCCCTTCAGGAGTaGAAAGGAGCTCAAGGGGAA +
Preference number: 2 (lower is better)
Translates to: KPPPQPKTHLTPDLLLERSSLQE*KGAQGE
Trigger: TTCCCCTTGAGCTCCTTTTCACTCCTGAAGGGAGCT...TCTCTCTAGTAGTAGATCTGGAGTGAGGTGTGTCTTGGGTTGAGGAGGTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR TCA 90 bp GGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCAGCTCCCTTCAGGAGTaGAAAGGAGCTCAAGGGGAA +
Preference number: 2 (lower is better)
Translates to: GKCQSLSYSVSSAPQFTSSSLQE*KGAQGE
Trigger: TTCCCCTTGAGCTCCTTTTCACTCCTGAAGGGAGCT...GCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR GCA 90 bp CATGAGGACTCTAATGAAGAGGGTCTCCCCCTTGATGAATGGACCCACAGTGTCAGTAGATGCCCAAATTaGTCTTGGAGGGATGGGGCA +
Preference number: 2 (lower is better)
Translates to: HEDSNEEGLPLDEWTHSVSRCPN*SWRDGA
Trigger: TGCCCCATCCCTCCAAGAGCAATTTGGGCATCTACT...GACACTGTGGGTCCATTCATCAAGGGGGAGACCCTCTTCATTAGAGTCCTCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CCA 90 bp AAGCCACCTCCTCAACCCAAGACACACCTCACTCCAGATCTACTACTAGAGAGATCTCTCTGTGTAGCCTaGGAGAGGCTGAACTTCCTC +
Preference number: 2 (lower is better)
Translates to: KPPPQPKTHLTPDLLLERSLCVA*ERLNFL
Trigger: GAGGAAGTTCAGCCTCTCCCAGGCTACACAGAGAGA...TCTCTCTAGTAGTAGATCTGGAGTGAGGTGTGTCTTGGGTTGAGGAGGTGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CCA 90 bp GAGAGCCCTCACCGTGACATTACAGACCCATCCTGTAGAACCCACAGTGCCTGGGAGCACTGTGTTCCCTaGACAATTCATTTTGGCAAA +
Preference number: 2 (lower is better)
Translates to: ESPHRDITDPSCRTHSAWEHCVP*TIHFGK
Trigger: TTTGCCAAAATGAATTGTCCAGGGAACACAGTGCTC...CCAGGCACTGTGGGTTCTACAGGATGGGTCTGTAATGTCACGGTGAGGGCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR TCA 90 bp AGATGGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACGCTTCTGTATGGAGATaGACACGGGGCTGCAGCTCA +
Preference number: 2 (lower is better)
Translates to: RWEMPKFKLLSVQCPTVHASVWR*TRGCSS
Trigger: TGAGCTGCAGCCCCGTGTTCATCTCCATACAGAAGC...GTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR TCA 90 bp GACCAAGAAGGAAGAAGCTGCAGGGACGAGCATCTGATGGGAAATGGGTGCTTCTCCTGTGATACAGTCTaGATGACAGTCAAGCTGAAG +
Preference number: 2 (lower is better)
Translates to: DQEGRSCRDEHLMGNGCFSCDTV*MTVKLK
Trigger: CTTCAGCTTGACTGTCATTCAGACTGTATCACAGGA...GAAGCACCCATTTCCCATCAGATGCTCGTCCCTGCAGCTTCTTCCTTCTTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR TCA 90 bp CATGAGGACTCTAATGAAGAGGGTCTCCCCCTTGATGAATGGACCCACAGTGTCGCCTTGGCAACAATGTaGAAACCTGTCTGTTTCTCC +
Preference number: 2 (lower is better)
Translates to: HEDSNEEGLPLDEWTHSVALATM*KPVCFS
Trigger: GGAGAAACAGACAGGTTTTCACATTGTTGCCAAGGC...GACACTGTGGGTCCATTCATCAAGGGGGAGACCCTCTTCATTAGAGTCCTCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR TCA 90 bp TATAACATTACGGTCACGGATTCTACAGCCACAAATGCCCGCAGTCACATAAATGGTGGGAGGATCGCTTaGGGCCAGGTGTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: YNITVTDSTATNARSHINGGRIA*GQVFKT
Trigger: GGTCTTGAACACCTGGCCTCAAGCGATCCTCCCACC...ATTTATGTGACTGCGGGCATTTGTGGCTGTAGAATCCGTGACCGTAATGTTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR TCA 90 bp GAGAGCCCTCACCGTGACATTACAGACCCATCCTGTAGAACCCACAGTGCCTGGATGAGCGCTTTTCAATaGGTTCTGAAGGAATGTGTA +
Preference number: 2 (lower is better)
Translates to: ESPHRDITDPSCRTHSAWMSAFQ*VLKECV
Trigger: TACACATTCCTTCAGAACTCATTGAAAAGCGCTCAT...CCAGGCACTGTGGGTTCTACAGGATGGGTCTGTAATGTCACGGTGAGGGCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR GCA 90 bp CCAGAGGTCGAGAGATGCTCCTGCATTTGGCCCAGGATTAAGTTTTGGGCCATGCTAAGAGTGCAACTCTaGCCCAGGAATTTCCTTTTC +
Preference number: 2 (lower is better)
Translates to: PEVERCSCIWPRIKFWAMLRVQL*PRNFLF
Trigger: GAAAAGGAAATTCCTGGGGCAGAGTTGCACTCTTAG...CATGGCCCAAAACTTAATCCTGGGCCAAATGCAGGAGCATCTCTCGACCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR GCA 90 bp CCTGGCATTGGAAGGAGTCTTGCCTCTTTGTGCTGCAACATCTCTGGAAATGGGAAAGTGGGGGAAACCTaGGTCAAAGATCAGACCCTT +
Preference number: 2 (lower is better)
Translates to: PGIGRSLASLCCNISGNGKVGET*VKDQTL
Trigger: AAGGGTCTGATCTTTGACGCAGGTTTCCCCCACTTT...CCCATTTCCAGAGATGTTGCAGCACAAAGAGGCAAGACTCCTTCCAATGCCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CCA 90 bp GCTCTTCAGTTTCAGGCAGAGATCTGGGTAAATACATACCTGGGACATCCTTCAGCATCTGATGGGAAATaGGTGCTTCTCTGCAGGGGG +
Preference number: 2 (lower is better)
Translates to: ALQFQAEIWVNTYLGHPSASDGK*VLLCRG
Trigger: CCCCCTGCAGAGAAGCACCCATTTCCCATCAGATGC...TGAAGGATGTCCCAGGTATGTATTTACCCAGATCTCTGCCTGAAACTGAAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CCA 90 bp AAGCCACCTCCTCAACCCAAGACACACCTCACTCCAGATCTACTACTAGAGAGATTGCTCTTGGAGGGATaGGGCATCCAACAATCATGG +
Preference number: 2 (lower is better)
Translates to: KPPPQPKTHLTPDLLLERLLLEG*GIQQSW
Trigger: CCATGATTGTTGGATGCCCCATCCCTCCAAGAGCAA...TCTCTCTAGTAGTAGATCTGGAGTGAGGTGTGTCTTGGGTTGAGGAGGTGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CCA 90 bp AAGCCACCTCCTCAACCCAAGACACACCTCACTCCAGATCTACTACTAGAGAGAACCCACAGTGTCCTTTaGTCCTCAGCTTCTAACAGC +
Preference number: 2 (lower is better)
Translates to: KPPPQPKTHLTPDLLLERTHSVL*SSASNS
Trigger: GCTGTTAGAAGCTGAGGACCAAAGGACACTGTGGGT...TCTCTCTAGTAGTAGATCTGGAGTGAGGTGTGTCTTGGGTTGAGGAGGTGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR TCA 90 bp CCTGGCATTGGAAGGAGTCTTGCCTCTTTGTGCTGCAACATCTCTGGAAATGGGAAGCTAAGCCTCCTGTaGTACAGTCTGAATGACAGT +
Preference number: 2 (lower is better)
Translates to: PGIGRSLASLCCNISGNGKLSLL*YSLNDS
Trigger: ACTGTCATTCAGACTGTATCACAGGAGGCTTAGCTT...CCCATTTCCAGAGATGTTGCAGCACAAAGAGGCAAGACTCCTTCCAATGCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR TCA 90 bp TTACATTCTAAAATAAAGAGCTCCCAAAAGGGTGGAGAGGGAAGTATCTGTGTGGCAGCCTCACAAACCTaGAGCGCAGCACAACAGCCG +
Preference number: 2 (lower is better)
Translates to: LHSKIKSSQKGGEGSICVAASQT*SAAQQP
Trigger: CGGCTGTTGTGCTGCGCTTCAGGTTTGTGAGGCTGC...CACACAGATACTTCCCTCTCCACCCTTTTGGGAGCTCTTTATTTTAGAATGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR GCA 90 bp AAGCCACCTCCTCAACCCAAGACACACCTCACTCCAGATCTACTACTAGAGAGAAAAGTGGGGGAAACCTaGGTCAAAGATCAGACCCTT +
Preference number: 2 (lower is better)
Translates to: KPPPQPKTHLTPDLLLERKVGET*VKDQTL
Trigger: AAGGGTCTGATCTTTGACGCAGGTTTCCCCCACTTT...TCTCTCTAGTAGTAGATCTGGAGTGAGGTGTGTCTTGGGTTGAGGAGGTGGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR GCA 90 bp GGGTGGAGAAAAAGGCAGGGTAATTACAGAGAGCACTGTGTTCCCTGGACAATTCAAGAAGGAAGAAGCTaGAGGGACGAGCATCTGATG +
Preference number: 2 (lower is better)
Translates to: GWRKRQGNYREHCVPWTIQEGRS*RDEHLM
Trigger: CATCAGATGCTCGTCCCTGCAGCTTCTTCCTTCTTG...AATTGTCCAGGGAACACAGTGCTCTCTGTAATTACCCTGCCTTTTTCTCCACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR GCA 90 bp CATGAGGACTCTAATGAAGAGGGTCTCCCCCTTGATGAATGGACCCACAGTGTCCTCTGGAAATGGGTATaGAGAATCTCTGGTGACAAG +
Preference number: 2 (lower is better)
Translates to: HEDSNEEGLPLDEWTHSVLWKWV*RISGDK
Trigger: CTTGTCACCAGAGATTCTGCATACCCATTTCCAGAG...GACACTGTGGGTCCATTCATCAAGGGGGAGACCCTCTTCATTAGAGTCCTCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR GCA 90 bp TCTACAGCCACAAATGCCCGCAGTCACATAAATATATCCAATCCAATCAATGCCGTGTGTGTGCTTGCGTaGATGGTGGGGGTACCACTC +
Preference number: 2 (lower is better)
Translates to: STATNARSHINISNPINAVCVLA*MVGVPL
Trigger: GAGTGGTACCCCCACCATGCACGCAAGCACACACAC...GGCATTGATTGGATTGGATATATTTATGTGACTGCGGGCATTTGTGGCTGTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CCA 90 bp AAGCCACCTCCTCAACCCAAGACACACCTCACTCCAGATCTACTACTAGAGAGAGGGACATCCTTCATATaGCTTAGGGCTTCCACAAAG +
Preference number: 2 (lower is better)
Translates to: KPPPQPKTHLTPDLLLERGTSFI*LRASTK
Trigger: CTTTGTGGAAGCCCTAAGCCATATGAAGGATGTCCC...TCTCTCTAGTAGTAGATCTGGAGTGAGGTGTGTCTTGGGTTGAGGAGGTGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CCA 90 bp CATGAGGACTCTAATGAAGAGGGTCTCCCCCTTGATGAATGGACCCACAGTGTCTCCAGATTTTTGTGTTaGGGTGGAGAAAAAGGCAGG +
Preference number: 2 (lower is better)
Translates to: HEDSNEEGLPLDEWTHSVSRFLC*GGEKGR
Trigger: CCTGCCTTTTTCTCCACCCCAACACAAAAATCTGGA...GACACTGTGGGTCCATTCATCAAGGGGGAGACCCTCTTCATTAGAGTCCTCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR TCA 90 bp ATTAAAAGCACTGTAGCTGCAGTGAGTCCATTGTTCTCTCTATCCAACTGTCCCAGCTCCCTTCAGGAGTaGAAAGGAGCTCAAGGGGAA +
Preference number: 2 (lower is better)
Translates to: IKSTVAAVSPLFSLSNCPSSLQE*KGAQGE
Trigger: TTCCCCTTGAGCTCCTTTTCACTCCTGAAGGGAGCT...GGGACAGTTGGATAGAGAGAACAATGGACTCACTGCAGCTACAGTGCTTTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR TCA 90 bp CATGAGGACTCTAATGAAGAGGGTCTCCCCCTTGATGAATGGACCCACAGTGTCGAATTTTATCCTGCCTaGGTAGATGCCCAAATTGCT +
Preference number: 2 (lower is better)
Translates to: HEDSNEEGLPLDEWTHSVEFYPA*VDAQIA
Trigger: AGCAATTTGGGCATCTACTCAGGCAGGATAAAATTC...GACACTGTGGGTCCATTCATCAAGGGGGAGACCCTCTTCATTAGAGTCCTCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR TCA 90 bp TCTACAGCCACAAATGCCCGCAGTCACATAAATATATCCAATCCAATCAATGCCAGAGAGCCCTCACCGTaGCATTACAGACCCATCCTG +
Preference number: 2 (lower is better)
Translates to: STATNARSHINISNPINAREPSP*HYRPIL
Trigger: CAGGATGGGTCTGTAATGTCACGGTGAGGGCTCTCT...GGCATTGATTGGATTGGATATATTTATGTGACTGCGGGCATTTGTGGCTGTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR GCA 90 bp GAGAGCCCTCACCGTGACATTACAGACCCATCCTGTAGAACCCACAGTGCCTGGGTTATCATAAAAGTCTaGTGCATTTATCTGATCACC +
Preference number: 2 (lower is better)
Translates to: ESPHRDITDPSCRTHSAWVIIKV*CIYLIT
Trigger: GGTGATCAGATAAATGCAGCAGACTTTTATGATAAC...CCAGGCACTGTGGGTTCTACAGGATGGGTCTGTAATGTCACGGTGAGGGCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR GCA 90 bp GAGGACTCTAATGAAGAGGGTCTCCCCCTTGATGAATGGACCCACAGTGTCCTTAGTCTTGCCTCTTTGTaGTGCAACATCTCTGGAAAT +
Preference number: 2 (lower is better)
Translates to: EDSNEEGLPLDEWTHSVLSLASL*CNISGN
Trigger: ATTTCCAGAGATGTTGCAGCACAAAGAGGCAAGACT...AAGGACACTGTGGGTCCATTCATCAAGGGGGAGACCCTCTTCATTAGAGTCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR GCA 90 bp TTACATTCTAAAATAAAGAGCTCCCAAAAGGGTGGAGAGGGAAGTATCTGTGTGCCAGCCTCTCTCTCTTaGTATCTGGGTGGCCTGGCA +
Preference number: 2 (lower is better)
Translates to: LHSKIKSSQKGGEGSICVPASLS*YLGGLA
Trigger: TGCCAGGCCACCCAGATAGCAAGAGAGAGAGGCTGG...CACACAGATACTTCCCTCTCCACCCTTTTGGGAGCTCTTTATTTTAGAATGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CCA 90 bp TCTACAGCCACAAATGCCCGCAGTCACATAAATATATCCAATCCAATCAATGCCGGCATCCAACAATCATaGCTGGGCTGGAAGGCTGTG +
Preference number: 2 (lower is better)
Translates to: STATNARSHINISNPINAGIQQS*LGWKAV
Trigger: CACAGCCTTCCAGCCCAGCCATGATTGTTGGATGCC...GGCATTGATTGGATTGGATATATTTATGTGACTGCGGGCATTTGTGGCTGTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR CAA 90 bp CATTTGGCTAATTTCATGAGGACTCTAATGAAGAGGGTCTCCCCCTaGATGAATGGACCCACAGTGTCCTTTGGTCCTCAGCTTCTAACA +
Preference number: 2 (lower is better)
Translates to: HLANFMRTLMKRVSP*MNGPTVSFGPQLLT
Trigger: TGTTAGAAGCTGAGGACCAAAGGACACTGTGGGTCCATTCATCAAGGGGGAGACCCTCTTCATTAGAGTCCTCATGAAATTAGCCAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR CAA 90 bp AAGCTGAGTTTGTGTAAACTGCGAACAAGCTGTGGCATCAGTCTCTaGGGACAACTCACTAGCTTTACAGAAGACAGGAACGCCGCAAAT +
Preference number: 2 (lower is better)
Translates to: KLSLCKLRTSCGISL*GQLTSFTEDRNAAN
Trigger: ATTTGCGGCGTTCCTGTCTTCTGTAAAGCTAGTGAGTTGTCCCAAGAGACTGATGCCACAGCTTGTTCGCAGTTTACACAAACTCAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR TCA 90 bp GGGTGGAGAAAAAGGCAGGGTAATTACAGAGAGCACTGTGTTCCCTGGACAATTTCCTGTGATACAGTCTaGATGACAGTCAAGCTGAAG +
Preference number: 2 (lower is better)
Translates to: GWRKRQGNYREHCVPWTISCDTV*MTVKLK
Trigger: CTTCAGCTTGACTGTCATTCAGACTGTATCACAGGA...AATTGTCCAGGGAACACAGTGCTCTCTGTAATTACCCTGCCTTTTTCTCCACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR TCA 90 bp GGGTGGAGAAAAAGGCAGGGTAATTACAGAGAGCACTGTGTTCCCTGGACAATTATGCAGAATCTCTGGTaGCAAGCAATTATAGCTGGG +
Preference number: 2 (lower is better)
Translates to: GWRKRQGNYREHCVPWTIMQNLW*QAIIAG
Trigger: CCCAGCTATAATTGCTTGTCACCAGAGATTCTGCAT...AATTGTCCAGGGAACACAGTGCTCTCTGTAATTACCCTGCCTTTTTCTCCACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CCA 90 bp TATAACATTACGGTCACGGATTCTACAGCCACAAATGCCCGCAGTCACATAAATTCTCTCTGTGTAGCCTaGGAGAGGCTGAACTTCCTC +
Preference number: 2 (lower is better)
Translates to: YNITVTDSTATNARSHINSLCVA*ERLNFL
Trigger: GAGGAAGTTCAGCCTCTCCCAGGCTACACAGAGAGA...ATTTATGTGACTGCGGGCATTTGTGGCTGTAGAATCCGTGACCGTAATGTTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CCA 90 bp GGGTGGAGAAAAAGGCAGGGTAATTACAGAGAGCACTGTGTTCCCTGGACAATTGTGCTGCAACATCTCTaGAAATGGGTATGCAGAATC +
Preference number: 2 (lower is better)
Translates to: GWRKRQGNYREHCVPWTIVLQHL*KWVCRI
Trigger: GATTCTGCATACCCATTTCCAGAGATGTTGCAGCAC...AATTGTCCAGGGAACACAGTGCTCTCTGTAATTACCCTGCCTTTTTCTCCACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CCA 90 bp TATAACATTACGGTCACGGATTCTACAGCCACAAATGCCCGCAGTCACATAAATTGGGTGGCCTGGCATTaGAAGGAGTCTTGCCTCTTT +
Preference number: 2 (lower is better)
Translates to: YNITVTDSTATNARSHINWVAWH*KESCLF
Trigger: AAAGAGGCAAGACTCCTTCCAATGCCAGGCCACCCA...ATTTATGTGACTGCGGGCATTTGTGGCTGTAGAATCCGTGACCGTAATGTTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR TCA 90 bp GAAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCGCTTCTGTATGGAGATaGACACGGGGCTGCAGCTCA +
Preference number: 2 (lower is better)
Translates to: ETCVKDQTLTYKNNIHIRASVWR*TRGCSS
Trigger: TGAGCTGCAGCCCCGTGTTCATCTCCATACAGAAGC...GCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR TCA 90 bp AAGCCACCTCCTCAACCCAAGACACACCTCACTCCAGATCTACTACTAGAGAGAATGAGCGCTTTTCAATaGGTTCTGAAGGAATGTGTA +
Preference number: 2 (lower is better)
Translates to: KPPPQPKTHLTPDLLLERMSAFQ*VLKECV
Trigger: TACACATTCCTTCAGAACTCATTGAAAAGCGCTCAT...TCTCTCTAGTAGTAGATCTGGAGTGAGGTGTGTCTTGGGTTGAGGAGGTGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR GCA 90 bp AGATGGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCTAAGAGTGCAACTCTaGCCCAGGAATTTCCTTTTC +
Preference number: 2 (lower is better)
Translates to: RWEMPKFKLLSVQCPTVHLRVQL*PRNFLF
Trigger: GAAAAGGAAATTCCTGGGGCAGAGTTGCACTCTTAG...GTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR GCA 90 bp TATAACATTACGGTCACGGATTCTACAGCCACAAATGCCCGCAGTCACATAAATAGTAGATGCCCAAATTaGTCTTGGAGGGATGGGGCA +
Preference number: 2 (lower is better)
Translates to: YNITVTDSTATNARSHINSRCPN*SWRDGA
Trigger: TGCCCCATCCCTCCAAGAGCAATTTGGGCATCTACT...ATTTATGTGACTGCGGGCATTTGTGGCTGTAGAATCCGTGACCGTAATGTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR GCA 90 bp TCTACAGCCACAAATGCCCGCAGTCACATAAATATATCCAATCCAATCAATGCCAACAATGCCTCCTTCTaGGGACCAATCCTGCATCTC +
Preference number: 2 (lower is better)
Translates to: STATNARSHINISNPINANNASF*GPILHL
Trigger: GAGATGCAGGATTGGTCCGCAGAAGGAGGCATTGTT...GGCATTGATTGGATTGGATATATTTATGTGACTGCGGGCATTTGTGGCTGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CCA 90 bp GAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCTAGCTAGAAAAAGAAAGTaGGGGAAACCTGCGTCAAAG +
Preference number: 2 (lower is better)
Translates to: EMPKFKLLSVQCPTVHQLARKRK*GKPASK
Trigger: CTTTGACGCAGGTTTCCCCCACTTTCTTTTTCTAGC...TAGCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CCA 90 bp TCTACAGCCACAAATGCCCGCAGTCACATAAATATATCCAATCCAATCAATGCCTTGCTCTTGGAGGGATaGGGCATCCAACAATCATGG +
Preference number: 2 (lower is better)
Translates to: STATNARSHINISNPINALLLEG*GIQQSW
Trigger: CCATGATTGTTGGATGCCCCATCCCTCCAAGAGCAA...GGCATTGATTGGATTGGATATATTTATGTGACTGCGGGCATTTGTGGCTGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR TCA 90 bp TCTACAGCCACAAATGCCCGCAGTCACATAAATATATCCAATCCAATCAATGCCGCCTTGGCAACAATGTaGAAACCTGTCTGTTTCTCC +
Preference number: 2 (lower is better)
Translates to: STATNARSHINISNPINAALATM*KPVCFS
Trigger: GGAGAAACAGACAGGTTTTCACATTGTTGCCAAGGC...GGCATTGATTGGATTGGATATATTTATGTGACTGCGGGCATTTGTGGCTGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR GCA 90 bp GAGGACTCTAATGAAGAGGGTCTCCCCCTTGATGAATGGACCCACAGTGTCCTTGTTATCATAAAAGTCTaGTGCATTTATCTGATCACC +
Preference number: 2 (lower is better)
Translates to: EDSNEEGLPLDEWTHSVLVIIKV*CIYLIT
Trigger: GGTGATCAGATAAATGCAGCAGACTTTTATGATAAC...AAGGACACTGTGGGTCCATTCATCAAGGGGGAGACCCTCTTCATTAGAGTCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR GCA 90 bp TCTACAGCCACAAATGCCCGCAGTCACATAAATATATCCAATCCAATCAATGCCCTTGCCTCTTTGTGCTaGAACATCTCTGGAAATGGG +
Preference number: 2 (lower is better)
Translates to: STATNARSHINISNPINALASLC*NISGNG
Trigger: CCCATTTCCAGAGATGTTGCAGCACAAAGAGGCAAG...GGCATTGATTGGATTGGATATATTTATGTGACTGCGGGCATTTGTGGCTGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR GCA 90 bp TTACATTCTAAAATAAAGAGCTCCCAAAAGGGTGGAGAGGGAAGTATCTGTGTGACCCAACAGCTATACTaGATAGGGGGAGGGTTTGAG +
Preference number: 2 (lower is better)
Translates to: LHSKIKSSQKGGEGSICVTQQLY*IGGGFE
Trigger: CTCAAACCCTCCCCCTATGCAGTATAGCTGTTGGGT...CACACAGATACTTCCCTCTCCACCCTTTTGGGAGCTCTTTATTTTAGAATGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CCA 90 bp CCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGAGAGAAAGTTCTCAGTTaGTTCCAGTCTCCAGCTCCC +
Preference number: 2 (lower is better)
Translates to: PASKIRPLPIKITYTFAGEKVLS*FQSPAP
Trigger: GGGAGCTGGAGACTGGAACCAACTGAGAACTTTCTC...TCCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CCA 90 bp TTACATTCTAAAATAAAGAGCTCCCAAAAGGGTGGAGAGGGAAGTATCTGTGTGGAGAAAGTTCTCAGTTaGTTCCAGTCTCCAGCTCCC +
Preference number: 2 (lower is better)
Translates to: LHSKIKSSQKGGEGSICVEKVLS*FQSPAP
Trigger: GGGAGCTGGAGACTGGAACCAACTGAGAACTTTCTC...CACACAGATACTTCCCTCTCCACCCTTTTGGGAGCTCTTTATTTTAGAATGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CCA 90 bp AGATGGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACTTCTCAATCTGGTCATaGACTAAGAGTGCAACTCTG +
Preference number: 2 (lower is better)
Translates to: RWEMPKFKLLSVQCPTVHFSIWS*TKSATL
Trigger: CAGAGTTGCACTCTTAGTCCATGACCAGATTGAGAA...GTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CCA 90 bp TATAACATTACGGTCACGGATTCTACAGCCACAAATGCCCGCAGTCACATAAATGGGACATCCTTCATATaGCTTAGGGCTTCCACAAAG +
Preference number: 2 (lower is better)
Translates to: YNITVTDSTATNARSHINGTSFI*LRASTK
Trigger: CTTTGTGGAAGCCCTAAGCCATATGAAGGATGTCCC...ATTTATGTGACTGCGGGCATTTGTGGCTGTAGAATCCGTGACCGTAATGTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR TCA 90 bp GAAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGCAGCTGTTGGTTCTaGTTGTGTTCTCGCCAGCAT +
Preference number: 2 (lower is better)
Translates to: ETCVKDQTLTYKNNIHIRCSCWF*LCSRQH
Trigger: ATGCTGGCGAGAACACAATCAGAACCAACAGCTGCA...GCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR TCA 90 bp TCTACAGCCACAAATGCCCGCAGTCACATAAATATATCCAATCCAATCAATGCCATGCAGAATCTCTGGTaGCAAGCAATTATAGCTGGG +
Preference number: 2 (lower is better)
Translates to: STATNARSHINISNPINAMQNLW*QAIIAG
Trigger: CCCAGCTATAATTGCTTGTCACCAGAGATTCTGCAT...GGCATTGATTGGATTGGATATATTTATGTGACTGCGGGCATTTGTGGCTGTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR TCA 90 bp TATAACATTACGGTCACGGATTCTACAGCCACAAATGCCCGCAGTCACATAAATTCTCTTCCATTTAAATaGGGGTGGCAACAACCAGGA +
Preference number: 2 (lower is better)
Translates to: YNITVTDSTATNARSHINSLPFK*GWQQPG
Trigger: TCCTGGTTGTTGCCACCCTCATTTAAATGGAAGAGA...ATTTATGTGACTGCGGGCATTTGTGGCTGTAGAATCCGTGACCGTAATGTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR GCA 90 bp TCTACAGCCACAAATGCCCGCAGTCACATAAATATATCCAATCCAATCAATGCCCTATCCAACTGTCCCTaGTTCTGTATGGAGATGAAC +
Preference number: 2 (lower is better)
Translates to: STATNARSHINISNPINALSNCP*FCMEMN
Trigger: GTTCATCTCCATACAGAAGCAGGGACAGTTGGATAG...GGCATTGATTGGATTGGATATATTTATGTGACTGCGGGCATTTGTGGCTGTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR GCA 90 bp TTACATTCTAAAATAAAGAGCTCCCAAAAGGGTGGAGAGGGAAGTATCTGTGTGAAAGTGGGGGAAACCTaGGTCAAAGATCAGACCCTT +
Preference number: 2 (lower is better)
Translates to: LHSKIKSSQKGGEGSICVKVGET*VKDQTL
Trigger: AAGGGTCTGATCTTTGACGCAGGTTTCCCCCACTTT...CACACAGATACTTCCCTCTCCACCCTTTTGGGAGCTCTTTATTTTAGAATGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR GCA 90 bp TCTACAGCCACAAATGCCCGCAGTCACATAAATATATCCAATCCAATCAATGCCCTCTGGAAATGGGTATaGAGAATCTCTGGTGACAAG +
Preference number: 2 (lower is better)
Translates to: STATNARSHINISNPINALWKWV*RISGDK
Trigger: CTTGTCACCAGAGATTCTGCATACCCATTTCCAGAG...GGCATTGATTGGATTGGATATATTTATGTGACTGCGGGCATTTGTGGCTGTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CCA 90 bp GAAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCGAGAAAGTTCTCAGTTaGTTCCAGTCTCCAGCTCCC +
Preference number: 2 (lower is better)
Translates to: ETCVKDQTLTYKNNIHIREKVLS*FQSPAP
Trigger: GGGAGCTGGAGACTGGAACCAACTGAGAACTTTCTC...GCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CCA 90 bp CCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGACTCGCCAGCATTCCATaGATAAAGACAGAGAGAGAG +
Preference number: 2 (lower is better)
Translates to: PASKIRPLPIKITYTFAGLASIP*IKTERE
Trigger: CTCTCTCTCTGTCTTTATCCATGGAATGCTGGCGAG...TCCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR GCA 90 bp ACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGCTATCCAACTGTCCCTaGTTCTGTATGGAGATGAAC +
Preference number: 2 (lower is better)
Translates to: TCVKDQTLTYKNNIHIRWLSNCP*FCMEMN
Trigger: GTTCATCTCCATACAGAAGCAGGGACAGTTGGATAG...CCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR GCA 90 bp CCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGACTATCCAACTGTCCCTaGTTCTGTATGGAGATGAAC +
Preference number: 2 (lower is better)
Translates to: PASKIRPLPIKITYTFAGLSNCP*FCMEMN
Trigger: GTTCATCTCCATACAGAAGCAGGGACAGTTGGATAG...TCCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR GCA 90 bp GGGTGGAGAAAAAGGCAGGGTAATTACAGAGAGCACTGTGTTCCCTGGACAATTGTTATCATAAAAGTCTaGTGCATTTATCTGATCACC +
Preference number: 2 (lower is better)
Translates to: GWRKRQGNYREHCVPWTIVIIKV*CIYLIT
Trigger: GGTGATCAGATAAATGCAGCAGACTTTTATGATAAC...AATTGTCCAGGGAACACAGTGCTCTCTGTAATTACCCTGCCTTTTTCTCCACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR GCA 90 bp TATAACATTACGGTCACGGATTCTACAGCCACAAATGCCCGCAGTCACATAAATAGTCTTGCCTCTTTGTaGTGCAACATCTCTGGAAAT +
Preference number: 2 (lower is better)
Translates to: YNITVTDSTATNARSHINSLASL*CNISGN
Trigger: ATTTCCAGAGATGTTGCAGCACAAAGAGGCAAGACT...ATTTATGTGACTGCGGGCATTTGTGGCTGTAGAATCCGTGACCGTAATGTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CCA 90 bp AAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGAGAAAGTTCTCAGTTaGTTCCAGTCTCCAGCTCCC +
Preference number: 2 (lower is better)
Translates to: KPASKIRPLPIKITYTFAEKVLS*FQSPAP
Trigger: GGGAGCTGGAGACTGGAACCAACTGAGAACTTTCTC...AGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CCA 90 bp TATAACATTACGGTCACGGATTCTACAGCCACAAATGCCCGCAGTCACATAAATTTCTCAATCTGGTCATaGACTAAGAGTGCAACTCTG +
Preference number: 2 (lower is better)
Translates to: YNITVTDSTATNARSHINFSIWS*TKSATL
Trigger: CAGAGTTGCACTCTTAGTCCATGACCAGATTGAGAA...ATTTATGTGACTGCGGGCATTTGTGGCTGTAGAATCCGTGACCGTAATGTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CCA 90 bp TCTACAGCCACAAATGCCCGCAGTCACATAAATATATCCAATCCAATCAATGCCTTTCAGGCAGAGATCTaGGTAAATACATACCTGGGA +
Preference number: 2 (lower is better)
Translates to: STATNARSHINISNPINAFQAEI*VNTYLG
Trigger: TCCCAGGTATGTATTTACCCAGATCTCTGCCTGAAA...GGCATTGATTGGATTGGATATATTTATGTGACTGCGGGCATTTGTGGCTGTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CCA 90 bp TTACATTCTAAAATAAAGAGCTCCCAAAAGGGTGGAGAGGGAAGTATCTGTGTGGTTCAAGACCAGCCTTaGCAACAATGTGAAAACCTG +
Preference number: 2 (lower is better)
Translates to: LHSKIKSSQKGGEGSICVVQDQP*QQCENL
Trigger: CAGGTTTTCACATTGTTGCCAAGGCTGGTCTTGAAC...CACACAGATACTTCCCTCTCCACCCTTTTGGGAGCTCTTTATTTTAGAATGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CCA 90 bp TCTACAGCCACAAATGCCCGCAGTCACATAAATATATCCAATCCAATCAATGCCCTGGACAATTCATTTTaGCAAACAGCCAAGAAGCTC +
Preference number: 2 (lower is better)
Translates to: STATNARSHINISNPINALDNSF*QTAKKL
Trigger: GAGCTTCTTGGCTGTTTGCCAAAATGAATTGTCCAG...GGCATTGATTGGATTGGATATATTTATGTGACTGCGGGCATTTGTGGCTGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR GCA 90 bp AGATGGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACATCATAAAAGTCTGCTaGATTTATCTGATCACCACA +
Preference number: 2 (lower is better)
Translates to: RWEMPKFKLLSVQCPTVHIIKVC*IYLITT
Trigger: TGTGGTGATCAGATAAATGCAGCAGACTTTTATGAT...GTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCCATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CCA 90 bp TTACATTCTAAAATAAAGAGCTCCCAAAAGGGTGGAGAGGGAAGTATCTGTGTGTTCTCAATCTGGTCATaGACTAAGAGTGCAACTCTG +
Preference number: 2 (lower is better)
Translates to: LHSKIKSSQKGGEGSICVFSIWS*TKSATL
Trigger: CAGAGTTGCACTCTTAGTCCATGACCAGATTGAGAA...CACACAGATACTTCCCTCTCCACCCTTTTGGGAGCTCTTTATTTTAGAATGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CCA 90 bp GAAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTTCTCAATCTGGTCATaGACTAAGAGTGCAACTCTG +
Preference number: 2 (lower is better)
Translates to: ETCVKDQTLTYKNNIHIRFSIWS*TKSATL
Trigger: CAGAGTTGCACTCTTAGTCCATGACCAGATTGAGAA...GCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR GCA 90 bp CCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGAGTTATCATAAAAGTCTaGTGCATTTATCTGATCACC +
Preference number: 2 (lower is better)
Translates to: PASKIRPLPIKITYTFAGVIIKV*CIYLIT
Trigger: GGTGATCAGATAAATGCAGCAGACTTTTATGATAAC...TCCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR TCA 72 bp GCATGGTGGGGGTACCACTCCGCAGCCTCACAAACCTaGAGCGCAGCACAACAGCCGTGGCCTTTGTCCAGG +
Preference number: 3 (lower is better)
Translates to: AWWGYHSAASQT*SAAQQPWPLSR
Trigger: CCTGGACAAAGGCCACGGCTGTTGTGCTGCGCTTCAGGTTTGTGAGGCTGCGGAGTGGTACCCCCACCATGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR TCA 72 bp GGGGCATCCAACAATCATGGCTGGGCTGGAAGGCTGTaGCTAGTGCCTGGGCACCCACCAATCTGCCCAGAG +
Preference number: 3 (lower is better)
Translates to: GASNNHGWAGRL*LVPGHPPICPE
Trigger: CTCTGGGCAGATTGGTGGGTGCCCAGGCACTAGTCACAGCCTTCCAGCCCAGCCATGATTGTTGGATGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR GCA 72 bp CTGGAGCAGGTGTCCATTCTTCTGGACACTACCAGCTaGCCCAGGGGCACTGGACAGGGTGATGCTAAGGCA +
Preference number: 3 (lower is better)
Translates to: LEQVSILLDTTS*PRGTGQGDAKA
Trigger: TGCCTTAGCATCACCCTGTCCAGTGCCCCTGGGGCAGCTGGTAGTGTCCAGAAGAATGGACACCTGCTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR CCA 72 bp CAATCATGGCTGGGCTGGAAGGCTGTGACTAGTGCCTaGGCACCCACCAATCTGCCCAGAGGTCGAGAGATG +
Preference number: 3 (lower is better)
Translates to: QSWLGWKAVTSA*APTNLPRGREM
Trigger: CATCTCTCGACCTCTGGGCAGATTGGTGGGTGCCCAGGCACTAGTCACAGCCTTCCAGCCCAGCCATGATTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR GCA 72 bp CCTGGGCACCCACCAATCTGCCCAGAGGTCGAGAGATaGTCCTGCATTTGGCCCAGGATTAAGTTTTGGGCC +
Preference number: 3 (lower is better)
Translates to: PGHPPICPEVER*SCIWPRIKFWA
Trigger: GGCCCAAAACTTAATCCTGGGCCAAATGCAGGAGCATCTCTCGACCTCTGGGCAGATTGGTGGGTGCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR GCA 72 bp GGTGGAGAGGGAAGTATCTGTGTGTGTGTGCTTGCGTaGATGGTGGGGGTACCACTCCGCAGCCTCACAAAC +
Preference number: 3 (lower is better)
Translates to: GGEGSICVCVLA*MVGVPLRSLTN
Trigger: GTTTGTGAGGCTGCGGAGTGGTACCCCCACCATGCACGCAAGCACACACACACAGATACTTCCCTCTCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CAA 90 bp GAGAGCCCTCACCGTGACATTACAGACCCATCCTGTAGAACCCACAGTGCCTGGTACAATCCCAACACTTaGAGAGGCCGAGGTGGGAGG +
Preference number: 3 (lower is better)
Translates to: ESPHRDITDPSCRTHSAWYNPNT*RGRGGR
Trigger: CCTCCCACCTCGGCCTCTCAAAGTGTTGGGATTGTA...CCAGGCACTGTGGGTTCTACAGGATGGGTCTGTAATGTCACGGTGAGGGCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CAA 90 bp GAGGAAGGGACAGATGGCCTGCTGACTGGGGCTGAGGCAGAACTAGATTTTCTCCTGGGTGGCCTGGCATaGGAAGGAGTCTTGCCTCTT +
Preference number: 3 (lower is better)
Translates to: EEGTDGLLTGAEAELDFLLGGLA*EGVLPL
Trigger: AAGAGGCAAGACTCCTTCCAATGCCAGGCCACCCAG...GAGAAAATCTAGTTCTGCCTCAGCCCCAGTCAGCAGGCCATCTGTCCCTTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CAA 90 bp GAGGAAGGGACAGATGGCCTGCTGACTGGGGCTGAGGCAGAACTAGATTTTCTCTACAATCCCAACACTTaGAGAGGCCGAGGTGGGAGG +
Preference number: 3 (lower is better)
Translates to: EEGTDGLLTGAEAELDFLYNPNT*RGRGGR
Trigger: CCTCCCACCTCGGCCTCTCAAAGTGTTGGGATTGTA...GAGAAAATCTAGTTCTGCCTCAGCCCCAGTCAGCAGGCCATCTGTCCCTTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CAA 90 bp GAGAGCCCTCACCGTGACATTACAGACCCATCCTGTAGAACCCACAGTGCCTGGCAACAGCCGTGGCCTTaGTCCAGGACAAAAACCCAA +
Preference number: 3 (lower is better)
Translates to: ESPHRDITDPSCRTHSAWQQPWP*SRTKTQ
Trigger: TTGGGTTTTTGTCCTGGACAAAGGCCACGGCTGTTG...CCAGGCACTGTGGGTTCTACAGGATGGGTCTGTAATGTCACGGTGAGGGCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR CCA 72 bp AAATTGCTCTTGGAGGGATGGGGCATCCAACAATCATaGCTGGGCTGGAAGGCTGTGACTAGTGCCTGGGCA +
Preference number: 3 (lower is better)
Translates to: KLLLEGWGIQQS*LGWKAVTSAWA
Trigger: TGCCCAGGCACTAGTCACAGCCTTCCAGCCCAGCCATGATTGTTGGATGCCCCATCCCTCCAAGAGCAATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CAA 90 bp CATGAGGACTCTAATGAAGAGGGTCTCCCCCTTGATGAATGGACCCACAGTGTCCTGGGTGGCCTGGCATaGGAAGGAGTCTTGCCTCTT +
Preference number: 3 (lower is better)
Translates to: HEDSNEEGLPLDEWTHSVLGGLA*EGVLPL
Trigger: AAGAGGCAAGACTCCTTCCAATGCCAGGCCACCCAG...GACACTGTGGGTCCATTCATCAAGGGGGAGACCCTCTTCATTAGAGTCCTCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR GCA 72 bp CACCCACCAATCTGCCCAGAGGTCGAGAGATGCTCCTaGATTTGGCCCAGGATTAAGTTTTGGGCCATGAAG +
Preference number: 3 (lower is better)
Translates to: HPPICPEVERCS*IWPRIKFWAMK
Trigger: CTTCATGGCCCAAAACTTAATCCTGGGCCAAATGCAGGAGCATCTCTCGACCTCTGGGCAGATTGGTGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CAA 90 bp GAGAGCCCTCACCGTGACATTACAGACCCATCCTGTAGAACCCACAGTGCCTGGGCTGCAGTGAGTCCATaGTTCTCTCTATCCAACTGT +
Preference number: 3 (lower is better)
Translates to: ESPHRDITDPSCRTHSAWAAVSP*FSLSNC
Trigger: ACAGTTGGATAGAGAGAACAATGGACTCACTGCAGC...CCAGGCACTGTGGGTTCTACAGGATGGGTCTGTAATGTCACGGTGAGGGCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR GCA 72 bp GCAGTGAGTCCATTGTTCTCTCTATCCAACTGTCCCTaGTTCTGTATGGAGATGAACACGGGGCTGCAGCTC +
Preference number: 3 (lower is better)
Translates to: AVSPLFSLSNCP*FCMEMNTGLQL
Trigger: GAGCTGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAGAACAATGGACTCACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR GCA 72 bp AGGGTGGCAACAACCAGGAATGAGCAAAGACTGCTCTaGTCAGCCTCCTTACCTCTCTTGGCCAAGTTCAAG +
Preference number: 3 (lower is better)
Translates to: RVATTRNEQRLL*SASLPLLAKFK
Trigger: CTTGAACTTGGCCAAGAGAGGTAAGGAGGCTGAGCAGAGCAGTCTTTGCTCATTCCTGGTTGTTGCCACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CAA 90 bp AAGCCACCTCCTCAACCCAAGACACACCTCACTCCAGATCTACTACTAGAGAGAAAGAGGGTCTCCCCCTaGATGAATGGACCCACAGTG +
Preference number: 3 (lower is better)
Translates to: KPPPQPKTHLTPDLLLERKRVSP*MNGPTV
Trigger: CACTGTGGGTCCATTCATCAAGGGGGAGACCCTCTT...TCTCTCTAGTAGTAGATCTGGAGTGAGGTGTGTCTTGGGTTGAGGAGGTGGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR TCA 72 bp AGGAGAGGAAGGGACAGATGGCCTGCTGACTGGGGCTaGGGCAGAACTAGATTTTCTCTCTTGTGGTTTAAG +
Preference number: 3 (lower is better)
Translates to: RRGRDRWPADWG*GRTRFSLLWFK
Trigger: CTTAAACCACAAGAGAGAAAATCTAGTTCTGCCTCAGCCCCAGTCAGCAGGCCATCTGTCCCTTCCTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR GCA 72 bp TCCTTCTGCGGACCAATCCTGCATCTCAATCTGAGGTaGTTGTATCATCTCTCTCTGTGTAGCCTGGGAGAG +
Preference number: 3 (lower is better)
Translates to: SFCGPILHLNLR*LYHLSLCSLGE
Trigger: CTCTCCCAGGCTACACAGAGAGAGATGATACAAGCACCTCAGATTGAGATGCAGGATTGGTCCGCAGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR GCA 72 bp GGGTGGCCTGGCATTGGAAGGAGTCTTGCCTCTTTGTaGTGCAACATCTCTGGAAATGGGTATGCAGAATCT +
Preference number: 3 (lower is better)
Translates to: GWPGIGRSLASL*CNISGNGYAES
Trigger: AGATTCTGCATACCCATTTCCAGAGATGTTGCAGCACAAAGAGGCAAGACTCCTTCCAATGCCAGGCCACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR CCA 72 bp GAGGACTCTAATGAAGAGGGTCTCCCCCTTGATGAATaGACCCACAGTGTCCTTTGGTCCTCAGCTTCTAAC +
Preference number: 3 (lower is better)
Translates to: EDSNEEGLPLDE*THSVLWSSASN
Trigger: GTTAGAAGCTGAGGACCAAAGGACACTGTGGGTCCATTCATCAAGGGGGAGACCCTCTTCATTAGAGTCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CAA 90 bp GAGGAAGGGACAGATGGCCTGCTGACTGGGGCTGAGGCAGAACTAGATTTTCTCAAGGAGTTTTTAGGGTaGTGCCATTTGACTAAAGGG +
Preference number: 3 (lower is better)
Translates to: EEGTDGLLTGAEAELDFLKEFLG*CHLTKG
Trigger: CCCTTTAGTCAAATGGCACAACCCTAAAAACTCCTT...GAGAAAATCTAGTTCTGCCTCAGCCCCAGTCAGCAGGCCATCTGTCCCTTCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR GCA 72 bp AGTTCTGAAGGAATGTGTATACCAGCCTCTCTCTCTTaGTATCTGGGTGGCCTGGCATTGGAAGGAGTCTTG +
Preference number: 3 (lower is better)
Translates to: SSEGMCIPASLS*YLGGLALEGVL
Trigger: CAAGACTCCTTCCAATGCCAGGCCACCCAGATAGCAAGAGAGAGAGGCTGGTATACACATTCCTTCAGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR CCA 72 bp ATTTTATCCTGCCTGAGTAGATGCCCAAATTGCTCTTaGAGGGATGGGGCATCCAACAATCATGGCTGGGCT +
Preference number: 3 (lower is better)
Translates to: ILSCLSRCPNCS*RDGASNNHGWA
Trigger: AGCCCAGCCATGATTGTTGGATGCCCCATCCCTCCAAGAGCAATTTGGGCATCTACTCAGGCAGGATAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR CCA 72 bp GGGTATGCAGAATCTCTGGTGACAAGCAATTATAGCTaGGGTTGGTCAACAATGCCTCCTTCTGCGGACCAA +
Preference number: 3 (lower is better)
Translates to: GYAESLVTSNYS*GWSTMPPSADQ
Trigger: TTGGTCCGCAGAAGGAGGCATTGTTGACCAACCCCAGCTATAATTGCTTGTCACCAGAGATTCTGCATACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CAA 90 bp GGGTGGAGAAAAAGGCAGGGTAATTACAGAGAGCACTGTGTTCCCTGGACAATTTTCCTTCTCTCCAGTTaGGAAGCTAAGCCTCCTGTG +
Preference number: 3 (lower is better)
Translates to: GWRKRQGNYREHCVPWTIFLLSS*EAKPPV
Trigger: CACAGGAGGCTTAGCTTCCAAACTGGAGAGAAGGAA...AATTGTCCAGGGAACACAGTGCTCTCTGTAATTACCCTGCCTTTTTCTCCACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR TCA 72 bp ATCAAACAAGGCAGAGCAGCATCTAGGCAACTATGCTaGATACAGACCAAGGGAAGGCCTACCTCACACTAC +
Preference number: 3 (lower is better)
Translates to: IKQGRAASRQLC*IQTKGRPTSHY
Trigger: GTAGTGTGAGGTAGGCCTTCCCTTGGTCTGTATTCAGCATAGTTGCCTAGATGCTGCTCTGCCTTGTTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR CCA 72 bp AGACACAGAGAGAGACAGACAGAGAAAGTTCTCAGTTaGTTCCAGTCTCCAGCTCCCTTCAGGAGTGAAAAG +
Preference number: 3 (lower is better)
Translates to: RHRERQTEKVLS*FQSPAPFRSEK
Trigger: CTTTTCACTCCTGAAGGGAGCTGGAGACTGGAACCAACTGAGAACTTTCTCTGTCTGTCTCTCTCTGTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR CCA 72 bp GCTGTTGGTTCTGATTGTGTTCTCGCCAGCATTCCATaGATAAAGACAGAGAGAGAGAGAGAGAGAGAGGCA +
Preference number: 3 (lower is better)
Translates to: AVGSDCVLASIP*IKTEREREREA
Trigger: TGCCTCTCTCTCTCTCTCTCTCTCTGTCTTTATCCATGGAATGCTGGCGAGAACACAATCAGAACCAACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CAA 90 bp CATGAGGACTCTAATGAAGAGGGTCTCCCCCTTGATGAATGGACCCACAGTGTCAAGGAGTTTTTAGGGTaGTGCCATTTGACTAAAGGG +
Preference number: 3 (lower is better)
Translates to: HEDSNEEGLPLDEWTHSVKEFLG*CHLTKG
Trigger: CCCTTTAGTCAAATGGCACAACCCTAAAAACTCCTT...GACACTGTGGGTCCATTCATCAAGGGGGAGACCCTCTTCATTAGAGTCCTCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CAA 90 bp GCTCTTCAGTTTCAGGCAGAGATCTGGGTAAATACATACCTGGGACATCCTTCATTCCTTCTCTCCAGTTaGGAAGCTAAGCCTCCTGTG +
Preference number: 3 (lower is better)
Translates to: ALQFQAEIWVNTYLGHPSFLLSS*EAKPPV
Trigger: CACAGGAGGCTTAGCTTCCAAACTGGAGAGAAGGAA...TGAAGGATGTCCCAGGTATGTATTTACCCAGATCTCTGCCTGAAACTGAAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CAA 90 bp TCTACAGCCACAAATGCCCGCAGTCACATAAATATATCCAATCCAATCAATGCCTACAATCCCAACACTTaGAGAGGCCGAGGTGGGAGG +
Preference number: 3 (lower is better)
Translates to: STATNARSHINISNPINAYNPNT*RGRGGR
Trigger: CCTCCCACCTCGGCCTCTCAAAGTGTTGGGATTGTA...GGCATTGATTGGATTGGATATATTTATGTGACTGCGGGCATTTGTGGCTGTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CAA 90 bp AAGCCACCTCCTCAACCCAAGACACACCTCACTCCAGATCTACTACTAGAGAGACAAAAATTGCAGCTGTaGGTTCTGATTGTGTTCTCG +
Preference number: 3 (lower is better)
Translates to: KPPPQPKTHLTPDLLLERQKLQL*VLIVFS
Trigger: CGAGAACACAATCAGAACCAACAGCTGCAATTTTTG...TCTCTCTAGTAGTAGATCTGGAGTGAGGTGTGTCTTGGGTTGAGGAGGTGGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CAA 90 bp TCTACAGCCACAAATGCCCGCAGTCACATAAATATATCCAATCCAATCAATGCCATGCCCAAATTGCTCTaGGAGGGATGGGGCATCCAA +
Preference number: 3 (lower is better)
Translates to: STATNARSHINISNPINAMPKLL*EGWGIQ
Trigger: TTGGATGCCCCATCCCTCCAAGAGCAATTTGGGCAT...GGCATTGATTGGATTGGATATATTTATGTGACTGCGGGCATTTGTGGCTGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR CCA 72 bp AAGACAGGAACGCCGCAAATCAAACAAAAGCCCAGATaGGCATCTAAATCTGGAGCAGGTGTCCATTCTTCT +
Preference number: 3 (lower is better)
Translates to: KTGTPQIKQKPR*ASKSGAGVHSS
Trigger: AGAAGAATGGACACCTGCTCCAGATTTAGATGCCCATCTGGGCTTTTGTTTGATTTGCGGCGTTCCTGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR CCA 72 bp TGTGTAAACTGCGAACAAGCTGTGGCATCAGTCTCTTaGGACAACTCACTAGCTTTACAGAAGACAGGAACG +
Preference number: 3 (lower is better)
Translates to: CVNCEQAVASVS*DNSLALQKTGT
Trigger: CGTTCCTGTCTTCTGTAAAGCTAGTGAGTTGTCCCAAGAGACTGATGCCACAGCTTGTTCGCAGTTTACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CAA 90 bp TATAACATTACGGTCACGGATTCTACAGCCACAAATGCCCGCAGTCACATAAATGCATTGGAAGGAGTCTaGCCTCTTTGTGCTGCAACA +
Preference number: 3 (lower is better)
Translates to: YNITVTDSTATNARSHINALEGV*PLCAAT
Trigger: TGTTGCAGCACAAAGAGGCAAGACTCCTTCCAATGC...ATTTATGTGACTGCGGGCATTTGTGGCTGTAGAATCCGTGACCGTAATGTTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CAA 90 bp TTACATTCTAAAATAAAGAGCTCCCAAAAGGGTGGAGAGGGAAGTATCTGTGTGCAACAGCCGTGGCCTTaGTCCAGGACAAAAACCCAA +
Preference number: 3 (lower is better)
Translates to: LHSKIKSSQKGGEGSICVQQPWP*SRTKTQ
Trigger: TTGGGTTTTTGTCCTGGACAAAGGCCACGGCTGTTG...CACACAGATACTTCCCTCTCCACCCTTTTGGGAGCTCTTTATTTTAGAATGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR GCA 72 bp TGGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTaGCCCACAGTTCACCAGCTAGGAGATAGAAGAACA +
Preference number: 3 (lower is better)
Translates to: WEMPKFKLLSVQ*PTVHQLGDRRT
Trigger: TGTTCTTCTATCTCCTAGCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CAA 90 bp GAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCTACAAAAATTGCAGCTGTaGGTTCTGATTGTGTTCTCG +
Preference number: 3 (lower is better)
Translates to: EMPKFKLLSVQCPTVHQLQKLQL*VLIVFS
Trigger: CGAGAACACAATCAGAACCAACAGCTGCAATTTTTG...TAGCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR TCA 72 bp CAGCTCACTCTTAGCAAAAATTGCAGCTGTTGGTTCTaGTTGTGTTCTCGCCAGCATTCCATGGATAAAGAC +
Preference number: 3 (lower is better)
Translates to: QLTLSKNCSCWF*LCSRQHSMDKD
Trigger: GTCTTTATCCATGGAATGCTGGCGAGAACACAATCAGAACCAACAGCTGCAATTTTTGCTAAGAGTGAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR CCA 72 bp ATACAGCAATCTGCTCTTCAGTTTCAGGCAGAGATCTaGGTAAATACATACCTGGGACATCCTTCATATGGC +
Preference number: 3 (lower is better)
Translates to: IQQSALQFQAEI*VNTYLGHPSYG
Trigger: GCCATATGAAGGATGTCCCAGGTATGTATTTACCCAGATCTCTGCCTGAAACTGAAGAGCAGATTGCTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR CCA 72 bp TTACAGAGAGCACTGTGTTCCCTGGACAATTCATTTTaGCAAACAGCCAAGAAGCTCCTGTTTTCTCTCTTC +
Preference number: 3 (lower is better)
Translates to: LQRALCSLDNSF*QTAKKLLFSLF
Trigger: GAAGAGAGAAAACAGGAGCTTCTTGGCTGTTTGCCAAAATGAATTGTCCAGGGAACACAGTGCTCTCTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CAA 90 bp TTACATTCTAAAATAAAGAGCTCCCAAAAGGGTGGAGAGGGAAGTATCTGTGTGCTCAATCTGAGGTGCTaGTATCATCTCTCTCTGTGT +
Preference number: 3 (lower is better)
Translates to: LHSKIKSSQKGGEGSICVLNLRC*YHLSLC
Trigger: ACACAGAGAGAGATGATACAAGCACCTCAGATTGAG...CACACAGATACTTCCCTCTCCACCCTTTTGGGAGCTCTTTATTTTAGAATGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CAA 90 bp TATAACATTACGGTCACGGATTCTACAGCCACAAATGCCCGCAGTCACATAAATGGAAGGACTCATCATTaGGCTAATTTCATGAGGACT +
Preference number: 3 (lower is better)
Translates to: YNITVTDSTATNARSHINGRTHH*ANFMRT
Trigger: AGTCCTCATGAAATTAGCCAAATGATGAGTCCTTCC...ATTTATGTGACTGCGGGCATTTGTGGCTGTAGAATCCGTGACCGTAATGTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR CCA 72 bp GATCTGGGTAAATACATACCTGGGACATCCTTCATATaGCTTAGGGCTTCCACAAAGGAAGTCAAATACATT +
Preference number: 3 (lower is better)
Translates to: DLGKYIPGTSFI*LRASTKEVKYI
Trigger: AATGTATTTGACTTCCTTTGTGGAAGCCCTAAGCCATATGAAGGATGTCCCAGGTATGTATTTACCCAGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CAA 90 bp AAGGGACTGGAAAGAAGACTAAGGCTTCTAGATGGGAAATGCCAAAGTTTAAGTCAAAAATTGCAGCTGTaGGTTCTGATTGTGTTCTCG +
Preference number: 3 (lower is better)
Translates to: KGLERRLRLLDGKCQSLSQKLQL*VLIVFS
Trigger: CGAGAACACAATCAGAACCAACAGCTGCAATTTTTG...ACTTAAACTTTGGCATTTCCCATCTAGAAGCCTTAGTCTTCTTTCCAGTCCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CAA 90 bp TTACATTCTAAAATAAAGAGCTCCCAAAAGGGTGGAGAGGGAAGTATCTGTGTGCAAAAATTGCAGCTGTaGGTTCTGATTGTGTTCTCG +
Preference number: 3 (lower is better)
Translates to: LHSKIKSSQKGGEGSICVQKLQL*VLIVFS
Trigger: CGAGAACACAATCAGAACCAACAGCTGCAATTTTTG...CACACAGATACTTCCCTCTCCACCCTTTTGGGAGCTCTTTATTTTAGAATGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR-3UTR CAA 90 bp TATAACATTACGGTCACGGATTCTACAGCCACAAATGCCCGCAGTCACATAAATATTTTAAAGCTGAGTTaGTGTAAACTGCGAACAAGC +
Preference number: 3 (lower is better)
Translates to: YNITVTDSTATNARSHINILKLS*CKLRTS
Trigger: GCTTGTTCGCAGTTTACACAAACTCAGCTTTAAAAT...ATTTATGTGACTGCGGGCATTTGTGGCTGTAGAATCCGTGACCGTAATGTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR TCA 72 bp TACTCCTTAAAATCACGAGTTATGAGCGCTTTTCAATaGGTTCTGAAGGAATGTGTATACCAGCCTCTCTCT +
Preference number: 3 (lower is better)
Translates to: YSLKSRVMSAFQ*VLKECVYQPLS
Trigger: AGAGAGAGGCTGGTATACACATTCCTTCAGAACTCATTGAAAAGCGCTCATAACTCGTGATTTTAAGGAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GAGAGCCCTCACCGTGACATTACAGACCCATCCTGTAGAACCCACAGTGCCTGGGGGCACCCACCAATCTaGCCAGAGGTCGAGAGATGC +
Preference number: 4 (lower is better)
Translates to: ESPHRDITDPSCRTHSAWGHPPI*PEVERC
Trigger: GCATCTCTCGACCTCTGGGCAGATTGGTGGGTGCCC...CCAGGCACTGTGGGTTCTACAGGATGGGTCTGTAATGTCACGGTGAGGGCTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GAGGAAGGGACAGATGGCCTGCTGACTGGGGCTGAGGCAGAACTAGATTTTCTCTGCTTGCGTGCATGGTaGGGGTACCACTCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: EEGTDGLLTGAEAELDFLCLRAW*GYHSAA
Trigger: GGCTGCGGAGTGGTACCCCCACCATGCACGCAAGCA...GAGAAAATCTAGTTCTGCCTCAGCCCCAGTCAGCAGGCCATCTGTCCCTTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp GACCAAGAAGGAAGAAGCTGCAGGGACGAGCATCTGATGGGAAATGGGTGCTTCCCTTCCTCTGGGGACTaGGGAGACCACCCACGTTGC +
Preference number: 4 (lower is better)
Translates to: DQEGRSCRDEHLMGNGCFPSSGD*GDHPRC
Trigger: GCAACGTGGGTGGTCTCCTCAGTCCCCAGAGGAAGG...GAAGCACCCATTTCCCATCAGATGCTCGTCCCTGCAGCTTCTTCCTTCTTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp TCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGCTCACCCTTCCTCTGGGGACTaGGGAGACCACCCACGTTGC +
Preference number: 4 (lower is better)
Translates to: SIQLSLLLYGDEHGAAAHPSSGD*GDHPRC
Trigger: GCAACGTGGGTGGTCTCCTCAGTCCCCAGAGGAAGG...GTGAGCTGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp CTCTCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGCTGGACAGATGGCCTGCTaGCTGGGGCTGAGGCAGAAC +
Preference number: 4 (lower is better)
Translates to: LSIQLSLLLYGDEHGAAAGQMAC*LGLRQN
Trigger: GTTCTGCCTCAGCCCCAGTCAGCAGGCCATCTGTCC...AGCTGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp CATGAGGACTCTAATGAAGAGGGTCTCCCCCTTGATGAATGGACCCACAGTGTCACCGCGGCGTTAGCGTaGCCCGGATGCGCATCGCTA +
Preference number: 4 (lower is better)
Translates to: HEDSNEEGLPLDEWTHSVTAALA*PGCASL
Trigger: TAGCGATGCGCATCCGGGTCACGCTAACGCCGCGGT...GACACTGTGGGTCCATTCATCAAGGGGGAGACCCTCTTCATTAGAGTCCTCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GAGAGCCCTCACCGTGACATTACAGACCCATCCTGTAGAACCCACAGTGCCTGGGGAAAGTCTCTGTGCTaGAGGTGCAGGCGCCATGAC +
Preference number: 4 (lower is better)
Translates to: ESPHRDITDPSCRTHSAWGKSLC*RCRRHD
Trigger: GTCATGGCGCCTGCACCTGCAGCACAGAGACTTTCC...CCAGGCACTGTGGGTTCTACAGGATGGGTCTGTAATGTCACGGTGAGGGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GACCAAGAAGGAAGAAGCTGCAGGGACGAGCATCTGATGGGAAATGGGTGCTTCGGGACTGGCCAGAGCTaGCTGGAGGTGGACATGAGG +
Preference number: 4 (lower is better)
Translates to: DQEGRSCRDEHLMGNGCFGTGQS*LEVDMR
Trigger: CCTCATGTCCACCTCCAGGCAGCTCTGGCCAGTCCC...GAAGCACCCATTTCCCATCAGATGCTCGTCCCTGCAGCTTCTTCCTTCTTGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GAGAGCCCTCACCGTGACATTACAGACCCATCCTGTAGAACCCACAGTGCCTGGAGTGCTTCCTTCCTCTaGGGACTGAGGAGACCACCC +
Preference number: 4 (lower is better)
Translates to: ESPHRDITDPSCRTHSAWSASFL*GLRRPP
Trigger: GGGTGGTCTCCTCAGTCCCCAGAGGAAGGAAGCACT...CCAGGCACTGTGGGTTCTACAGGATGGGTCTGTAATGTCACGGTGAGGGCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GAGAGCCCTCACCGTGACATTACAGACCCATCCTGTAGAACCCACAGTGCCTGGAACCTTGGCCAGGGCTaGAACCAGCTGGGTGGTAGT +
Preference number: 4 (lower is better)
Translates to: ESPHRDITDPSCRTHSAWNLGQG*NQLGGS
Trigger: ACTACCACCCAGCTGGTTCCAGCCCTGGCCAAGGTT...CCAGGCACTGTGGGTTCTACAGGATGGGTCTGTAATGTCACGGTGAGGGCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp GAGAGCCCTCACCGTGACATTACAGACCCATCCTGTAGAACCCACAGTGCCTGGGCAGGGACGAGCATCTaGTGGGAAATGGGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: ESPHRDITDPSCRTHSAWAGTSI*WEMGAS
Trigger: AGAAGCACCCATTTCCCATCAGATGCTCGTCCCTGC...CCAGGCACTGTGGGTTCTACAGGATGGGTCTGTAATGTCACGGTGAGGGCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp TCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGCTCACGCAGCCTCACAAACCTaGAGCGCAGCACAACAGCCG +
Preference number: 4 (lower is better)
Translates to: SIQLSLLLYGDEHGAAAHAASQT*SAAQQP
Trigger: CGGCTGTTGTGCTGCGCTTCAGGTTTGTGAGGCTGC...GTGAGCTGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp GGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCACCGCGGCGTTAGCGTaGCCCGGATGCGCATCGCTA +
Preference number: 4 (lower is better)
Translates to: GKCQSLSYSVSSAPQFTSTAALA*PGCASL
Trigger: TAGCGATGCGCATCCGGGTCACGCTAACGCCGCGGT...GCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GACCAAGAAGGAAGAAGCTGCAGGGACGAGCATCTGATGGGAAATGGGTGCTTCGGGCACCCACCAATCTaGCCAGAGGTCGAGAGATGC +
Preference number: 4 (lower is better)
Translates to: DQEGRSCRDEHLMGNGCFGHPPI*PEVERC
Trigger: GCATCTCTCGACCTCTGGGCAGATTGGTGGGTGCCC...GAAGCACCCATTTCCCATCAGATGCTCGTCCCTGCAGCTTCTTCCTTCTTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp CCAGAGGTCGAGAGATGCTCCTGCATTTGGCCCAGGATTAAGTTTTGGGCCATGCTGGGAGGCGGAGGTTaGAGTGAGCCGAGATCATGC +
Preference number: 4 (lower is better)
Translates to: PEVERCSCIWPRIKFWAMLGGGG*SEPRSC
Trigger: GCATGATCTCGGCTCACTGCAACCTCCGCCTCCCAG...CATGGCCCAAAACTTAATCCTGGGCCAAATGCAGGAGCATCTCTCGACCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp CTCTCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGCTGCTGTGACTAGTGCCTaGGCACCCACCAATCTGCCC +
Preference number: 4 (lower is better)
Translates to: LSIQLSLLLYGDEHGAAAAVTSA*APTNLP
Trigger: GGGCAGATTGGTGGGTGCCCAGGCACTAGTCACAGC...AGCTGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GAGAGCCCTCACCGTGACATTACAGACCCATCCTGTAGAACCCACAGTGCCTGGCAATCATGGCTGGGCTaGAAGGCTGTGACTAGTGCC +
Preference number: 4 (lower is better)
Translates to: ESPHRDITDPSCRTHSAWQSWLG*KAVTSA
Trigger: GGCACTAGTCACAGCCTTCCAGCCCAGCCATGATTG...CCAGGCACTGTGGGTTCTACAGGATGGGTCTGTAATGTCACGGTGAGGGCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR CAA 72 bp AAAAGGGTGGAGAGGGAAGTATCTGTGTGTGTGTGCTaGCGTGCATGGTGGGGGTACCACTCCGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: KRVEREVSVCVC*RAWWGYHSAAS
Trigger: TGAGGCTGCGGAGTGGTACCCCCACCATGCACGCAAGCACACACACACAGATACTTCCCTCTCCACCCTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp CCTGGCATTGGAAGGAGTCTTGCCTCTTTGTGCTGCAACATCTCTGGAAATGGGGCAGCCTCACAAACCTaGAGCGCAGCACAACAGCCG +
Preference number: 4 (lower is better)
Translates to: PGIGRSLASLCCNISGNGAASQT*SAAQQP
Trigger: CGGCTGTTGTGCTGCGCTTCAGGTTTGTGAGGCTGC...CCCATTTCCAGAGATGTTGCAGCACAAAGAGGCAAGACTCCTTCCAATGCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp GAGAGCCCTCACCGTGACATTACAGACCCATCCTGTAGAACCCACAGTGCCTGGGGTGAGCAGATCACCTaGGGTCAGGAGTTTGAGAAC +
Preference number: 4 (lower is better)
Translates to: ESPHRDITDPSCRTHSAWGEQIT*GQEFEN
Trigger: GTTCTCAAACTCCTGACCTCAGGTGATCTGCTCACC...CCAGGCACTGTGGGTTCTACAGGATGGGTCTGTAATGTCACGGTGAGGGCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp TCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGCTCACGGAAAGTCTCTGTGCTaGAGGTGCAGGCGCCATGAC +
Preference number: 4 (lower is better)
Translates to: SIQLSLLLYGDEHGAAAHGKSLC*RCRRHD
Trigger: GTCATGGCGCCTGCACCTGCAGCACAGAGACTTTCC...GTGAGCTGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp CTCTCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGCTCCAGAGGTCGAGAGATaGTCCTGCATTTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LSIQLSLLLYGDEHGAAAPEVER*SCIWPR
Trigger: CCTGGGCCAAATGCAGGAGCATCTCTCGACCTCTGG...AGCTGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp TCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGCTCACCCAGCCTCTCTCTCTTaGTATCTGGGTGGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: SIQLSLLLYGDEHGAAAHPASLS*YLGGLA
Trigger: TGCCAGGCCACCCAGATAGCAAGAGAGAGAGGCTGG...GTGAGCTGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp TCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGCTCACGTGTGTGTGCTTGCGTaGATGGTGGGGGTACCACTC +
Preference number: 4 (lower is better)
Translates to: SIQLSLLLYGDEHGAAAHVCVLA*MVGVPL
Trigger: GAGTGGTACCCCCACCATGCACGCAAGCACACACAC...GTGAGCTGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GACCAAGAAGGAAGAAGCTGCAGGGACGAGCATCTGATGGGAAATGGGTGCTTCCTGTGTGTGTGTGCTTaGGTGCATGGTGGGGGTACC +
Preference number: 4 (lower is better)
Translates to: DQEGRSCRDEHLMGNGCFLCVCA*VHGGGT
Trigger: GGTACCCCCACCATGCACGCAAGCACACACACACAG...GAAGCACCCATTTCCCATCAGATGCTCGTCCCTGCAGCTTCTTCCTTCTTGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp CCATGGATAAAGACAGAGAGAGAGAGAGAGAGAGAGGCAGAGAGGGAGGGAGAGCTGTGTGTGTGTGCTTaGGTGCATGGTGGGGGTACC +
Preference number: 4 (lower is better)
Translates to: PWIKTEREREREAEREGELCVCA*VHGGGT
Trigger: GGTACCCCCACCATGCACGCAAGCACACACACACAG...CTCTCCCTCCCTCTCTGCCTCTCTCTCTCTCTCTCTCTCTGTCTTTATCCATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp CCATGGATAAAGACAGAGAGAGAGAGAGAGAGAGAGGCAGAGAGGGAGGGAGAGCTCCAAAGCTGGAGCTaGGGTAGCAGGCCTGGTACT +
Preference number: 4 (lower is better)
Translates to: PWIKTEREREREAEREGELQSWS*GSRPGT
Trigger: AGTACCAGGCCTGCTACCCCAGCTCCAGCTTTGGAG...CTCTCCCTCCCTCTCTGCCTCTCTCTCTCTCTCTCTCTCTGTCTTTATCCATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GAGAGCCCTCACCGTGACATTACAGACCCATCCTGTAGAACCCACAGTGCCTGGTCTCTCTGTGTAGCCTaGGAGAGGCTGAACTTCCTC +
Preference number: 4 (lower is better)
Translates to: ESPHRDITDPSCRTHSAWSLCVA*ERLNFL
Trigger: GAGGAAGTTCAGCCTCTCCCAGGCTACACAGAGAGA...CCAGGCACTGTGGGTTCTACAGGATGGGTCTGTAATGTCACGGTGAGGGCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GAGAGCCCTCACCGTGACATTACAGACCCATCCTGTAGAACCCACAGTGCCTGGGCAGCACAACAGCCGTaGCCTTTGTCCAGGACAAAA +
Preference number: 4 (lower is better)
Translates to: ESPHRDITDPSCRTHSAWAAQQP*PLSRTK
Trigger: TTTTGTCCTGGACAAAGGCCACGGCTGTTGTGCTGC...CCAGGCACTGTGGGTTCTACAGGATGGGTCTGTAATGTCACGGTGAGGGCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp CTCTCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGCTCTGAACACCCACAGATaGACCATGGCTGCCACTACC +
Preference number: 4 (lower is better)
Translates to: LSIQLSLLLYGDEHGAAALNTHR*TMAATT
Trigger: GGTAGTGGCAGCCATGGTTCATCTGTGGGTGTTCAG...AGCTGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp CCATGGATAAAGACAGAGAGAGAGAGAGAGAGAGAGGCAGAGAGGGAGGGAGAGGCTTCTGTATGGAGATaGACACGGGGCTGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: PWIKTEREREREAEREGEASVWR*TRGCSS
Trigger: TGAGCTGCAGCCCCGTGTTCATCTCCATACAGAAGC...CTCTCCCTCCCTCTCTGCCTCTCTCTCTCTCTCTCTCTCTGTCTTTATCCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp CCATGGATAAAGACAGAGAGAGAGAGAGAGAGAGAGGCAGAGAGGGAGGGAGAGAGAGAGCCCTCACCGTaGCATTACAGACCCATCCTG +
Preference number: 4 (lower is better)
Translates to: PWIKTEREREREAEREGEREPSP*HYRPIL
Trigger: CAGGATGGGTCTGTAATGTCACGGTGAGGGCTCTCT...CTCTCCCTCCCTCTCTGCCTCTCTCTCTCTCTCTCTCTCTGTCTTTATCCATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GTTCTCTCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGGAAAGTCTCTGTGCTaGAGGTGCAGGCGCCATGAC +
Preference number: 4 (lower is better)
Translates to: VLSIQLSLLLYGDEHGAAGKSLC*RCRRHD
Trigger: GTCATGGCGCCTGCACCTGCAGCACAGAGACTTTCC...TGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp TCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGCTCACAGAGGAAAGTCTCTGTaGTGCAGGTGCAGGCGCCAT +
Preference number: 4 (lower is better)
Translates to: SIQLSLLLYGDEHGAAAHRGKSL*CRCRRH
Trigger: ATGGCGCCTGCACCTGCAGCACAGAGACTTTCCTCT...GTGAGCTGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GACCAAGAAGGAAGAAGCTGCAGGGACGAGCATCTGATGGGAAATGGGTGCTTCAGAGGAAAGTCTCTGTaGTGCAGGTGCAGGCGCCAT +
Preference number: 4 (lower is better)
Translates to: DQEGRSCRDEHLMGNGCFRGKSL*CRCRRH
Trigger: ATGGCGCCTGCACCTGCAGCACAGAGACTTTCCTCT...GAAGCACCCATTTCCCATCAGATGCTCGTCCCTGCAGCTTCTTCCTTCTTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GAGAGCCCTCACCGTGACATTACAGACCCATCCTGTAGAACCCACAGTGCCTGGAGTAGATGCCCAAATTaGTCTTGGAGGGATGGGGCA +
Preference number: 4 (lower is better)
Translates to: ESPHRDITDPSCRTHSAWSRCPN*SWRDGA
Trigger: TGCCCCATCCCTCCAAGAGCAATTTGGGCATCTACT...CCAGGCACTGTGGGTTCTACAGGATGGGTCTGTAATGTCACGGTGAGGGCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GAGAGCCCTCACCGTGACATTACAGACCCATCCTGTAGAACCCACAGTGCCTGGAACAATGCCTCCTTCTaGGGACCAATCCTGCATCTC +
Preference number: 4 (lower is better)
Translates to: ESPHRDITDPSCRTHSAWNNASF*GPILHL
Trigger: GAGATGCAGGATTGGTCCGCAGAAGGAGGCATTGTT...CCAGGCACTGTGGGTTCTACAGGATGGGTCTGTAATGTCACGGTGAGGGCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GTTCTCTCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCACCAGCCTCTCTCTCTTaGTATCTGGGTGGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: VLSIQLSLLLYGDEHGAAPASLS*YLGGLA
Trigger: TGCCAGGCCACCCAGATAGCAAGAGAGAGAGGCTGG...TGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GTTCTCTCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAAACCTTGGCCAGGGCTaGAACCAGCTGGGTGGTAGT +
Preference number: 4 (lower is better)
Translates to: VLSIQLSLLLYGDEHGAANLGQG*NQLGGS
Trigger: ACTACCACCCAGCTGGTTCCAGCCCTGGCCAAGGTT...TGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GAGAGCCCTCACCGTGACATTACAGACCCATCCTGTAGAACCCACAGTGCCTGGGAGAAAGTTCTCAGTTaGTTCCAGTCTCCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: ESPHRDITDPSCRTHSAWEKVLS*FQSPAP
Trigger: GGGAGCTGGAGACTGGAACCAACTGAGAACTTTCTC...CCAGGCACTGTGGGTTCTACAGGATGGGTCTGTAATGTCACGGTGAGGGCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp CCAGAGGTCGAGAGATGCTCCTGCATTTGGCCCAGGATTAAGTTTTGGGCCATGGCATCTGATGGGAAATaGGTGCTTCTCTGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: PEVERCSCIWPRIKFWAMASDGK*VLLCRG
Trigger: CCCCCTGCAGAGAAGCACCCATTTCCCATCAGATGC...CATGGCCCAAAACTTAATCCTGGGCCAAATGCAGGAGCATCTCTCGACCTCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCGCTGTGACTAGTGCCTaGGCACCCACCAATCTGCCC +
Preference number: 4 (lower is better)
Translates to: GKCQSLSYSVSSAPQFTSAVTSA*APTNLP
Trigger: GGGCAGATTGGTGGGTGCCCAGGCACTAGTCACAGC...GCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp CCATGGATAAAGACAGAGAGAGAGAGAGAGAGAGAGGCAGAGAGGGAGGGAGAGGGGATAATCCTGGTTTaGGATGCTGGCTACTGCTGC +
Preference number: 4 (lower is better)
Translates to: PWIKTEREREREAEREGEGIILV*DAGYCC
Trigger: GCAGCAGTAGCCAGCATCTCAAACCAGGATTATCCC...CTCTCCCTCCCTCTCTGCCTCTCTCTCTCTCTCTCTCTCTGTCTTTATCCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp GAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCTACCTTCCTCTGGGGACTaGGGAGACCACCCACGTTGC +
Preference number: 4 (lower is better)
Translates to: EMPKFKLLSVQCPTVHQLPSSGD*GDHPRC
Trigger: GCAACGTGGGTGGTCTCCTCAGTCCCCAGAGGAAGG...TAGCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp GACCAAGAAGGAAGAAGCTGCAGGGACGAGCATCTGATGGGAAATGGGTGCTTCAGCTCCCTTCAGGAGTaGAAAGGAGCTCAAGGGGAA +
Preference number: 4 (lower is better)
Translates to: DQEGRSCRDEHLMGNGCFSSLQE*KGAQGE
Trigger: TTCCCCTTGAGCTCCTTTTCACTCCTGAAGGGAGCT...GAAGCACCCATTTCCCATCAGATGCTCGTCCCTGCAGCTTCTTCCTTCTTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp GAGGAAGGGACAGATGGCCTGCTGACTGGGGCTGAGGCAGAACTAGATTTTCTCTGCAGCTGTTGGTTCTaGTTGTGTTCTCGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: EEGTDGLLTGAEAELDFLCSCWF*LCSRQH
Trigger: ATGCTGGCGAGAACACAATCAGAACCAACAGCTGCA...GAGAAAATCTAGTTCTGCCTCAGCCCCAGTCAGCAGGCCATCTGTCCCTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp CCATGGATAAAGACAGAGAGAGAGAGAGAGAGAGAGGCAGAGAGGGAGGGAGAGGGCAACAACCAGGAATaGGCAAAGACTGCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: PWIKTEREREREAEREGEGNNQE*AKTALL
Trigger: GAGCAGAGCAGTCTTTGCTCATTCCTGGTTGTTGCC...CTCTCCCTCCCTCTCTGCCTCTCTCTCTCTCTCTCTCTCTGTCTTTATCCATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp GAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCTAGGACAGATGGCCTGCTaGCTGGGGCTGAGGCAGAAC +
Preference number: 4 (lower is better)
Translates to: EMPKFKLLSVQCPTVHQLGQMAC*LGLRQN
Trigger: GTTCTGCCTCAGCCCCAGTCAGCAGGCCATCTGTCC...TAGCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp AAGCCACCTCCTCAACCCAAGACACACCTCACTCCAGATCTACTACTAGAGAGACTTGCCAGAGCTGTCTaGCTCAGAGGAGAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: KPPPQPKTHLTPDLLLERLARAV*LRGEEG
Trigger: CCCTTCCTCTCCTCTGAGTCAGACAGCTCTGGCAAG...TCTCTCTAGTAGTAGATCTGGAGTGAGGTGTGTCTTGGGTTGAGGAGGTGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GTTCTCTCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCACAGATGAACCATGGCTaGCACTACCTCCTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: VLSIQLSLLLYGDEHGAAQMNHG*HYLLSH
Trigger: GTGGCTCAGGAGGTAGTGGCAGCCATGGTTCATCTG...TGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp CCAGAGGTCGAGAGATGCTCCTGCATTTGGCCCAGGATTAAGTTTTGGGCCATGGGGGTTGGTCAACAATaGCTCCTTCTGCGGACCAAT +
Preference number: 4 (lower is better)
Translates to: PEVERCSCIWPRIKFWAMGVGQQ*LLLRTN
Trigger: ATTGGTCCGCAGAAGGAGGCATTGTTGACCAACCCC...CATGGCCCAAAACTTAATCCTGGGCCAAATGCAGGAGCATCTCTCGACCTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GAGAGCCCTCACCGTGACATTACAGACCCATCCTGTAGAACCCACAGTGCCTGGCTTGCCTCTTTGTGCTaGAACATCTCTGGAAATGGG +
Preference number: 4 (lower is better)
Translates to: ESPHRDITDPSCRTHSAWLASLC*NISGNG
Trigger: CCCATTTCCAGAGATGTTGCAGCACAAAGAGGCAAG...CCAGGCACTGTGGGTTCTACAGGATGGGTCTGTAATGTCACGGTGAGGGCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp AAGCCACCTCCTCAACCCAAGACACACCTCACTCCAGATCTACTACTAGAGAGAGTGTGTGTGCTTGCGTaGATGGTGGGGGTACCACTC +
Preference number: 4 (lower is better)
Translates to: KPPPQPKTHLTPDLLLERVCVLA*MVGVPL
Trigger: GAGTGGTACCCCCACCATGCACGCAAGCACACACAC...TCTCTCTAGTAGTAGATCTGGAGTGAGGTGTGTCTTGGGTTGAGGAGGTGGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp CTCTCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGCTGAGCAAAGACTGCTCTaGTCAGCCTCCTTACCTCTC +
Preference number: 4 (lower is better)
Translates to: LSIQLSLLLYGDEHGAAAEQRLL*SASLPL
Trigger: GAGAGGTAAGGAGGCTGAGCAGAGCAGTCTTTGCTC...AGCTGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp CTCTCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGCTAAAGAGAACCCACCATaGCCAGCTAGGGAAGGACTC +
Preference number: 4 (lower is better)
Translates to: LSIQLSLLLYGDEHGAAAKENPP*PAREGL
Trigger: GAGTCCTTCCCTAGCTGGGCATGGTGGGTTCTCTTT...AGCTGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCCTCCAAAGCTGGAGCTaGGGTAGCAGGCCTGGTACT +
Preference number: 4 (lower is better)
Translates to: GKCQSLSYSVSSAPQFTSLQSWS*GSRPGT
Trigger: AGTACCAGGCCTGCTACCCCAGCTCCAGCTTTGGAG...GCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GTTCTCTCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCACCCACAGATGAACCATaGCTGCCACTACCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: VLSIQLSLLLYGDEHGAAPTDEP*LPLPPE
Trigger: CTCAGGAGGTAGTGGCAGCCATGGTTCATCTGTGGG...TGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp CCTGGCATTGGAAGGAGTCTTGCCTCTTTGTGCTGCAACATCTCTGGAAATGGGCCCACAGATGAACCATaGCTGCCACTACCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: PGIGRSLASLCCNISGNGPTDEP*LPLPPE
Trigger: CTCAGGAGGTAGTGGCAGCCATGGTTCATCTGTGGG...CCCATTTCCAGAGATGTTGCAGCACAAAGAGGCAAGACTCCTTCCAATGCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCAGTGCTTCCTTCCTCTaGGGACTGAGGAGACCACCC +
Preference number: 4 (lower is better)
Translates to: GKCQSLSYSVSSAPQFTSSASFL*GLRRPP
Trigger: GGGTGGTCTCCTCAGTCCCCAGAGGAAGGAAGCACT...GCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GACCAAGAAGGAAGAAGCTGCAGGGACGAGCATCTGATGGGAAATGGGTGCTTCAGGGCTGGAACCAGCTaGGTGGTAGTGATCAGAACA +
Preference number: 4 (lower is better)
Translates to: DQEGRSCRDEHLMGNGCFRAGTS*VVVIRT
Trigger: TGTTCTGATCACTACCACCCAGCTGGTTCCAGCCCT...GAAGCACCCATTTCCCATCAGATGCTCGTCCCTGCAGCTTCTTCCTTCTTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp CCATGGATAAAGACAGAGAGAGAGAGAGAGAGAGAGGCAGAGAGGGAGGGAGAGAGGGCTGGAACCAGCTaGGTGGTAGTGATCAGAACA +
Preference number: 4 (lower is better)
Translates to: PWIKTEREREREAEREGERAGTS*VVVIRT
Trigger: TGTTCTGATCACTACCACCCAGCTGGTTCCAGCCCT...CTCTCCCTCCCTCTCTGCCTCTCTCTCTCTCTCTCTCTCTGTCTTTATCCATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GAGGAAGGGACAGATGGCCTGCTGACTGGGGCTGAGGCAGAACTAGATTTTCTCGAGAAAGTTCTCAGTTaGTTCCAGTCTCCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: EEGTDGLLTGAEAELDFLEKVLS*FQSPAP
Trigger: GGGAGCTGGAGACTGGAACCAACTGAGAACTTTCTC...GAGAAAATCTAGTTCTGCCTCAGCCCCAGTCAGCAGGCCATCTGTCCCTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp CATGAGGACTCTAATGAAGAGGGTCTCCCCCTTGATGAATGGACCCACAGTGTCGCATCTGATGGGAAATaGGTGCTTCTCTGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: HEDSNEEGLPLDEWTHSVASDGK*VLLCRG
Trigger: CCCCCTGCAGAGAAGCACCCATTTCCCATCAGATGC...GACACTGTGGGTCCATTCATCAAGGGGGAGACCCTCTTCATTAGAGTCCTCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GTTCTCTCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGGCATCCAACAATCATaGCTGGGCTGGAAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: VLSIQLSLLLYGDEHGAAGIQQS*LGWKAV
Trigger: CACAGCCTTCCAGCCCAGCCATGATTGTTGGATGCC...TGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp CCATGGATAAAGACAGAGAGAGAGAGAGAGAGAGAGGCAGAGAGGGAGGGAGAGTGGGTGGCCTGGCATTaGAAGGAGTCTTGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: PWIKTEREREREAEREGEWVAWH*KESCLF
Trigger: AAAGAGGCAAGACTCCTTCCAATGCCAGGCCACCCA...CTCTCCCTCCCTCTCTGCCTCTCTCTCTCTCTCTCTCTCTGTCTTTATCCATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp TCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGCTCACCTCTTGCTATCTGGGTaGCCTGGCATTGGAAGGAGT +
Preference number: 4 (lower is better)
Translates to: SIQLSLLLYGDEHGAAAHLLLSG*PGIGRS
Trigger: ACTCCTTCCAATGCCAGGCCACCCAGATAGCAAGAG...GTGAGCTGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GCTCTTCAGTTTCAGGCAGAGATCTGGGTAAATACATACCTGGGACATCCTTCATGCTTGCGTGCATGGTaGGGGTACCACTCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: ALQFQAEIWVNTYLGHPSCLRAW*GYHSAA
Trigger: GGCTGCGGAGTGGTACCCCCACCATGCACGCAAGCA...TGAAGGATGTCCCAGGTATGTATTTACCCAGATCTCTGCCTGAAACTGAAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp CCAGAGGTCGAGAGATGCTCCTGCATTTGGCCCAGGATTAAGTTTTGGGCCATGCTCCCCCTTGATGAATaGACCCACAGTGTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: PEVERCSCIWPRIKFWAMLPLDE*THSVLW
Trigger: CCAAAGGACACTGTGGGTCCATTCATCAAGGGGGAG...CATGGCCCAAAACTTAATCCTGGGCCAAATGCAGGAGCATCTCTCGACCTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp CCATGGATAAAGACAGAGAGAGAGAGAGAGAGAGAGGCAGAGAGGGAGGGAGAGCTCCCCCTTGATGAATaGACCCACAGTGTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: PWIKTEREREREAEREGELPLDE*THSVLW
Trigger: CCAAAGGACACTGTGGGTCCATTCATCAAGGGGGAG...CTCTCCCTCCCTCTCTGCCTCTCTCTCTCTCTCTCTCTCTGTCTTTATCCATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp TCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGCTCACAGGTGTCCATTCTTCTaGACACTACCAGCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: SIQLSLLLYGDEHGAAAHRCPFF*TLPAAP
Trigger: TGGGGCAGCTGGTAGTGTCCAGAAGAATGGACACCT...GTGAGCTGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp CTCTCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGCTGCATCACTGTTAGTCTaGCCTGTGACTCCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: LSIQLSLLLYGDEHGAAAASLLV*PVTPKL
Trigger: CAGCTTTGGAGTCACAGGTCAGACTAACAGTGATGC...AGCTGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp CCAGAGGTCGAGAGATGCTCCTGCATTTGGCCCAGGATTAAGTTTTGGGCCATGGCATCACTGTTAGTCTaGCCTGTGACTCCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: PEVERCSCIWPRIKFWAMASLLV*PVTPKL
Trigger: CAGCTTTGGAGTCACAGGTCAGACTAACAGTGATGC...CATGGCCCAAAACTTAATCCTGGGCCAAATGCAGGAGCATCTCTCGACCTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp CTCTCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGCTGGTCTCCATGGTTTGTaGTCCTCCAGAAAGGCATGT +
Preference number: 4 (lower is better)
Translates to: LSIQLSLLLYGDEHGAAAGLHGL*SSRKAC
Trigger: ACATGCCTTTCTGGAGGATCACAAACCATGGAGACC...AGCTGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp CTCTCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGCTTGCAGCTGTTGGTTCTaGTTGTGTTCTCGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: LSIQLSLLLYGDEHGAAACSCWF*LCSRQH
Trigger: ATGCTGGCGAGAACACAATCAGAACCAACAGCTGCA...AGCTGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp AGATGGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACGGTGGGAGGATCGCTTaGGGCCAGGTGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: RWEMPKFKLLSVQCPTVHGGRIA*GQVFKT
Trigger: GGTCTTGAACACCTGGCCTCAAGCGATCCTCCCACC...GTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp TCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGCTCACCTGAGGTCAGGAGTTTaGGAACAGCCTGGTCAACAT +
Preference number: 4 (lower is better)
Translates to: SIQLSLLLYGDEHGAAAHLRSGV*EQPGQH
Trigger: ATGTTGACCAGGCTGTTCTCAAACTCCTGACCTCAG...GTGAGCTGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp GAGGACTCTAATGAAGAGGGTCTCCCCCTTGATGAATGGACCCACAGTGTCCTTGCTAACAGAGGCATCTaGAGTTCAGAGGGAGAGTCG +
Preference number: 4 (lower is better)
Translates to: EDSNEEGLPLDEWTHSVLANRGI*SSEGES
Trigger: CGACTCTCCCTCTGAACTTCAGATGCCTCTGTTAGC...AAGGACACTGTGGGTCCATTCATCAAGGGGGAGACCCTCTTCATTAGAGTCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GACCAAGAAGGAAGAAGCTGCAGGGACGAGCATCTGATGGGAAATGGGTGCTTCAATCCTGGTTTGAGATaGTGGCTACTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: DQEGRSCRDEHLMGNGCFNPGLR*WLLLLL
Trigger: CAGCAGCAGCAGTAGCCAGCATCTCAAACCAGGATT...GAAGCACCCATTTCCCATCAGATGCTCGTCCCTGCAGCTTCTTCCTTCTTGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GAGGAAGGGACAGATGGCCTGCTGACTGGGGCTGAGGCAGAACTAGATTTTCTCTCTGCTCTTAATCTCTaGAGTGCTTCCTTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: EEGTDGLLTGAEAELDFLSALNL*SASFLW
Trigger: CCAGAGGAAGGAAGCACTGCAGAGATTAAGAGCAGA...GAGAAAATCTAGTTCTGCCTCAGCCCCAGTCAGCAGGCCATCTGTCCCTTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GAGAGCCCTCACCGTGACATTACAGACCCATCCTGTAGAACCCACAGTGCCTGGCTAAGAGTGCAACTCTaGCCCAGGAATTTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: ESPHRDITDPSCRTHSAWLRVQL*PRNFLF
Trigger: GAAAAGGAAATTCCTGGGGCAGAGTTGCACTCTTAG...CCAGGCACTGTGGGTTCTACAGGATGGGTCTGTAATGTCACGGTGAGGGCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp CCAGAGGTCGAGAGATGCTCCTGCATTTGGCCCAGGATTAAGTTTTGGGCCATGTTACTCAGTGTCCAGTaGCCCACAGTTCACCAGCTA +
Preference number: 4 (lower is better)
Translates to: PEVERCSCIWPRIKFWAMLLSVQ*PTVHQL
Trigger: TAGCTGGTGAACTGTGGGGCACTGGACACTGAGTAA...CATGGCCCAAAACTTAATCCTGGGCCAAATGCAGGAGCATCTCTCGACCTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GACCAAGAAGGAAGAAGCTGCAGGGACGAGCATCTGATGGGAAATGGGTGCTTCCAAGAAGGAAGAAGCTaGAGGGACGAGCATCTGATG +
Preference number: 4 (lower is better)
Translates to: DQEGRSCRDEHLMGNGCFQEGRS*RDEHLM
Trigger: CATCAGATGCTCGTCCCTGCAGCTTCTTCCTTCTTG...GAAGCACCCATTTCCCATCAGATGCTCGTCCCTGCAGCTTCTTCCTTCTTGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GACCAAGAAGGAAGAAGCTGCAGGGACGAGCATCTGATGGGAAATGGGTGCTTCTCCTGCCTGAGTAGATaGCCAAATTGCTCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: DQEGRSCRDEHLMGNGCFSCLSR*PNCSWR
Trigger: CCTCCAAGAGCAATTTGGGCATCTACTCAGGCAGGA...GAAGCACCCATTTCCCATCAGATGCTCGTCCCTGCAGCTTCTTCCTTCTTGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GACCAAGAAGGAAGAAGCTGCAGGGACGAGCATCTGATGGGAAATGGGTGCTTCACCCAACAGCTATACTaGATAGGGGGAGGGTTTGAG +
Preference number: 4 (lower is better)
Translates to: DQEGRSCRDEHLMGNGCFTQQLY*IGGGFE
Trigger: CTCAAACCCTCCCCCTATGCAGTATAGCTGTTGGGT...GAAGCACCCATTTCCCATCAGATGCTCGTCCCTGCAGCTTCTTCCTTCTTGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GCTCTTCAGTTTCAGGCAGAGATCTGGGTAAATACATACCTGGGACATCCTTCACTGGGAGGCGGAGGTTaGAGTGAGCCGAGATCATGC +
Preference number: 4 (lower is better)
Translates to: ALQFQAEIWVNTYLGHPSLGGGG*SEPRSC
Trigger: GCATGATCTCGGCTCACTGCAACCTCCGCCTCCCAG...TGAAGGATGTCCCAGGTATGTATTTACCCAGATCTCTGCCTGAAACTGAAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GGGTGGAGAAAAAGGCAGGGTAATTACAGAGAGCACTGTGTTCCCTGGACAATTCTCCAAAGCTGGAGCTaGGGTAGCAGGCCTGGTACT +
Preference number: 4 (lower is better)
Translates to: GWRKRQGNYREHCVPWTILQSWS*GSRPGT
Trigger: AGTACCAGGCCTGCTACCCCAGCTCCAGCTTTGGAG...AATTGTCCAGGGAACACAGTGCTCTCTGTAATTACCCTGCCTTTTTCTCCACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GAGGAAGGGACAGATGGCCTGCTGACTGGGGCTGAGGCAGAACTAGATTTTCTCTGGTTGCTGCTAATGTaGTGCTCTCTGCATCACTGT +
Preference number: 4 (lower is better)
Translates to: EEGTDGLLTGAEAELDFLWLLLM*CSLHHC
Trigger: ACAGTGATGCAGAGAGCACCACATTAGCAGCAACCA...GAGAAAATCTAGTTCTGCCTCAGCCCCAGTCAGCAGGCCATCTGTCCCTTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp TCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGCTCACTCTCCGACTGGTATGTaGTTGCTGCTAATGTGGTGC +
Preference number: 4 (lower is better)
Translates to: SIQLSLLLYGDEHGAAAHSPTGM*LLLMWC
Trigger: GCACCACATTAGCAGCAACCACATACCAGTCGGAGA...GTGAGCTGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCCCCACAGATGAACCATaGCTGCCACTACCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: GKCQSLSYSVSSAPQFTSPTDEP*LPLPPE
Trigger: CTCAGGAGGTAGTGGCAGCCATGGTTCATCTGTGGG...GCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GGGTGGAGAAAAAGGCAGGGTAATTACAGAGAGCACTGTGTTCCCTGGACAATTAGTGCTTCCTTCCTCTaGGGACTGAGGAGACCACCC +
Preference number: 4 (lower is better)
Translates to: GWRKRQGNYREHCVPWTISASFL*GLRRPP
Trigger: GGGTGGTCTCCTCAGTCCCCAGAGGAAGGAAGCACT...AATTGTCCAGGGAACACAGTGCTCTCTGTAATTACCCTGCCTTTTTCTCCACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCCAATCATGGCTGGGCTaGAAGGCTGTGACTAGTGCC +
Preference number: 4 (lower is better)
Translates to: GKCQSLSYSVSSAPQFTSQSWLG*KAVTSA
Trigger: GGCACTAGTCACAGCCTTCCAGCCCAGCCATGATTG...GCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp AAGCCACCTCCTCAACCCAAGACACACCTCACTCCAGATCTACTACTAGAGAGAGGCATCCAACAATCATaGCTGGGCTGGAAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: KPPPQPKTHLTPDLLLERGIQQS*LGWKAV
Trigger: CACAGCCTTCCAGCCCAGCCATGATTGTTGGATGCC...TCTCTCTAGTAGTAGATCTGGAGTGAGGTGTGTCTTGGGTTGAGGAGGTGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp CCTGGCATTGGAAGGAGTCTTGCCTCTTTGTGCTGCAACATCTCTGGAAATGGGTCTCTCTGTGTAGCCTaGGAGAGGCTGAACTTCCTC +
Preference number: 4 (lower is better)
Translates to: PGIGRSLASLCCNISGNGSLCVA*ERLNFL
Trigger: GAGGAAGTTCAGCCTCTCCCAGGCTACACAGAGAGA...CCCATTTCCAGAGATGTTGCAGCACAAAGAGGCAAGACTCCTTCCAATGCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GAGGACTCTAATGAAGAGGGTCTCCCCCTTGATGAATGGACCCACAGTGTCCTTCTCTTGCTATCTGGGTaGCCTGGCATTGGAAGGAGT +
Preference number: 4 (lower is better)
Translates to: EDSNEEGLPLDEWTHSVLLLLSG*PGIGRS
Trigger: ACTCCTTCCAATGCCAGGCCACCCAGATAGCAAGAG...AAGGACACTGTGGGTCCATTCATCAAGGGGGAGACCCTCTTCATTAGAGTCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GTTCTCTCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGCAGCACAACAGCCGTaGCCTTTGTCCAGGACAAAA +
Preference number: 4 (lower is better)
Translates to: VLSIQLSLLLYGDEHGAAAAQQP*PLSRTK
Trigger: TTTTGTCCTGGACAAAGGCCACGGCTGTTGTGCTGC...TGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GAGAGCCCTCACCGTGACATTACAGACCCATCCTGTAGAACCCACAGTGCCTGGTCCAGATTTTTGTGTTaGGGTGGAGAAAAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: ESPHRDITDPSCRTHSAWSRFLC*GGEKGR
Trigger: CCTGCCTTTTTCTCCACCCCAACACAAAAATCTGGA...CCAGGCACTGTGGGTTCTACAGGATGGGTCTGTAATGTCACGGTGAGGGCTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp TCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGCTCACACCCACAGTGTCCTTTaGTCCTCAGCTTCTAACAGC +
Preference number: 4 (lower is better)
Translates to: SIQLSLLLYGDEHGAAAHTHSVL*SSASNS
Trigger: GCTGTTAGAAGCTGAGGACCAAAGGACACTGTGGGT...GTGAGCTGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp CTCTCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGCTACTGCGAACAAGCTGTaGCATCAGTCTCTTGGGACA +
Preference number: 4 (lower is better)
Translates to: LSIQLSLLLYGDEHGAAATANKL*HQSLGT
Trigger: TGTCCCAAGAGACTGATGCCACAGCTTGTTCGCAGT...AGCTGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp GTTCTCTCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGGTCTCCATGGTTTGTaGTCCTCCAGAAAGGCATGT +
Preference number: 4 (lower is better)
Translates to: VLSIQLSLLLYGDEHGAAGLHGL*SSRKAC
Trigger: ACATGCCTTTCTGGAGGATCACAAACCATGGAGACC...TGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp TCTACAGCCACAAATGCCCGCAGTCACATAAATATATCCAATCCAATCAATGCCTGGGCTGGAAGGCTGTaGCTAGTGCCTGGGCACCCA +
Preference number: 4 (lower is better)
Translates to: STATNARSHINISNPINAWAGRL*LVPGHP
Trigger: TGGGTGCCCAGGCACTAGTCACAGCCTTCCAGCCCA...GGCATTGATTGGATTGGATATATTTATGTGACTGCGGGCATTTGTGGCTGTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp TATAACATTACGGTCACGGATTCTACAGCCACAAATGCCCGCAGTCACATAAATTGGGCTGGAAGGCTGTaGCTAGTGCCTGGGCACCCA +
Preference number: 4 (lower is better)
Translates to: YNITVTDSTATNARSHINWAGRL*LVPGHP
Trigger: TGGGTGCCCAGGCACTAGTCACAGCCTTCCAGCCCA...ATTTATGTGACTGCGGGCATTTGTGGCTGTAGAATCCGTGACCGTAATGTTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp ATTAAAAGCACTGTAGCTGCAGTGAGTCCATTGTTCTCTCTATCCAACTGTCCCGCAGCCTCACAAACCTaGAGCGCAGCACAACAGCCG +
Preference number: 4 (lower is better)
Translates to: IKSTVAAVSPLFSLSNCPAASQT*SAAQQP
Trigger: CGGCTGTTGTGCTGCGCTTCAGGTTTGTGAGGCTGC...GGGACAGTTGGATAGAGAGAACAATGGACTCACTGCAGCTACAGTGCTTTTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp CCAGAGGTCGAGAGATGCTCCTGCATTTGGCCCAGGATTAAGTTTTGGGCCATGGATGCTGGCTACTGCTaGTGCTGGAATATTGGCAAT +
Preference number: 4 (lower is better)
Translates to: PEVERCSCIWPRIKFWAMDAGYC*CWNIGN
Trigger: ATTGCCAATATTCCAGCAGCAGCAGTAGCCAGCATC...CATGGCCCAAAACTTAATCCTGGGCCAAATGCAGGAGCATCTCTCGACCTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCTAGGAAAGTCTCTGTGCTaGAGGTGCAGGCGCCATGAC +
Preference number: 4 (lower is better)
Translates to: EMPKFKLLSVQCPTVHQLGKSLC*RCRRHD
Trigger: GTCATGGCGCCTGCACCTGCAGCACAGAGACTTTCC...TAGCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GACCAAGAAGGAAGAAGCTGCAGGGACGAGCATCTGATGGGAAATGGGTGCTTCTCTGCTCTTAATCTCTaGAGTGCTTCCTTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: DQEGRSCRDEHLMGNGCFSALNL*SASFLW
Trigger: CCAGAGGAAGGAAGCACTGCAGAGATTAAGAGCAGA...GAAGCACCCATTTCCCATCAGATGCTCGTCCCTGCAGCTTCTTCCTTCTTGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp CCATGGATAAAGACAGAGAGAGAGAGAGAGAGAGAGGCAGAGAGGGAGGGAGAGAAAGTGGGGGAAACCTaGGTCAAAGATCAGACCCTT +
Preference number: 4 (lower is better)
Translates to: PWIKTEREREREAEREGEKVGET*VKDQTL
Trigger: AAGGGTCTGATCTTTGACGCAGGTTTCCCCCACTTT...CTCTCCCTCCCTCTCTGCCTCTCTCTCTCTCTCTCTCTCTGTCTTTATCCATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GAGGACTCTAATGAAGAGGGTCTCCCCCTTGATGAATGGACCCACAGTGTCCTTCAAGAAGGAAGAAGCTaGAGGGACGAGCATCTGATG +
Preference number: 4 (lower is better)
Translates to: EDSNEEGLPLDEWTHSVLQEGRS*RDEHLM
Trigger: CATCAGATGCTCGTCCCTGCAGCTTCTTCCTTCTTG...AAGGACACTGTGGGTCCATTCATCAAGGGGGAGACCCTCTTCATTAGAGTCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GCTCTTCAGTTTCAGGCAGAGATCTGGGTAAATACATACCTGGGACATCCTTCACCAGAGGTCGAGAGATaGTCCTGCATTTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: ALQFQAEIWVNTYLGHPSPEVER*SCIWPR
Trigger: CCTGGGCCAAATGCAGGAGCATCTCTCGACCTCTGG...TGAAGGATGTCCCAGGTATGTATTTACCCAGATCTCTGCCTGAAACTGAAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp AAGCCACCTCCTCAACCCAAGACACACCTCACTCCAGATCTACTACTAGAGAGAGGGGTTGGTCAACAATaGCTCCTTCTGCGGACCAAT +
Preference number: 4 (lower is better)
Translates to: KPPPQPKTHLTPDLLLERGVGQQ*LLLRTN
Trigger: ATTGGTCCGCAGAAGGAGGCATTGTTGACCAACCCC...TCTCTCTAGTAGTAGATCTGGAGTGAGGTGTGTCTTGGGTTGAGGAGGTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCGAGCAAAGACTGCTCTaGTCAGCCTCCTTACCTCTC +
Preference number: 4 (lower is better)
Translates to: GKCQSLSYSVSSAPQFTSEQRLL*SASLPL
Trigger: GAGAGGTAAGGAGGCTGAGCAGAGCAGTCTTTGCTC...GCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp TATAACATTACGGTCACGGATTCTACAGCCACAAATGCCCGCAGTCACATAAATCTGGACACTACCAGCTaGCCCAGGGGCACTGGACAG +
Preference number: 4 (lower is better)
Translates to: YNITVTDSTATNARSHINLDTTS*PRGTGQ
Trigger: CTGTCCAGTGCCCCTGGGGCAGCTGGTAGTGTCCAG...ATTTATGTGACTGCGGGCATTTGTGGCTGTAGAATCCGTGACCGTAATGTTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCCTTGGCCCAGACCATTaGTCTACCCCATACTCCTCT +
Preference number: 4 (lower is better)
Translates to: GKCQSLSYSVSSAPQFTSLGPDH*STPYSS
Trigger: AGAGGAGTATGGGGTAGAGCAATGGTCTGGGCCAAG...GCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp CCTGGCATTGGAAGGAGTCTTGCCTCTTTGTGCTGCAACATCTCTGGAAATGGGTCTCCGACTGGTATGTaGTTGCTGCTAATGTGGTGC +
Preference number: 4 (lower is better)
Translates to: PGIGRSLASLCCNISGNGSPTGM*LLLMWC
Trigger: GCACCACATTAGCAGCAACCACATACCAGTCGGAGA...CCCATTTCCAGAGATGTTGCAGCACAAAGAGGCAAGACTCCTTCCAATGCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp CCATGGATAAAGACAGAGAGAGAGAGAGAGAGAGAGGCAGAGAGGGAGGGAGAGTGTCTTGGGAAGAAGTaGCATCAGCTTTCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: PWIKTEREREREAEREGECLGKK*HQLSSC
Trigger: GCAAGAGGAAAGCTGATGCCACTTCTTCCCAAGACA...CTCTCCCTCCCTCTCTGCCTCTCTCTCTCTCTCTCTCTCTGTCTTTATCCATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GAGAGCCCTCACCGTGACATTACAGACCCATCCTGTAGAACCCACAGTGCCTGGGCCAATCACTACTGTTaGGTCCTTTCCATATTTCTG +
Preference number: 4 (lower is better)
Translates to: ESPHRDITDPSCRTHSAWANHYC*VLSIFL
Trigger: CAGAAATATGGAAAGGACCCAACAGTAGTGATTGGC...CCAGGCACTGTGGGTTCTACAGGATGGGTCTGTAATGTCACGGTGAGGGCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCAGGGCTGGAACCAGCTaGGTGGTAGTGATCAGAACA +
Preference number: 4 (lower is better)
Translates to: GKCQSLSYSVSSAPQFTSRAGTS*VVVIRT
Trigger: TGTTCTGATCACTACCACCCAGCTGGTTCCAGCCCT...GCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GAGAGCCCTCACCGTGACATTACAGACCCATCCTGTAGAACCCACAGTGCCTGGGCATGTTGTGCTGTTTaGCTGCAATTTCTTCATCTC +
Preference number: 4 (lower is better)
Translates to: ESPHRDITDPSCRTHSAWACCAV*LQFLHL
Trigger: GAGATGAAGAAATTGCAGCCAAACAGCACAACATGC...CCAGGCACTGTGGGTTCTACAGGATGGGTCTGTAATGTCACGGTGAGGGCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GTTCTCTCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGAGAAAGTTCTCAGTTaGTTCCAGTCTCCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: VLSIQLSLLLYGDEHGAAEKVLS*FQSPAP
Trigger: GGGAGCTGGAGACTGGAACCAACTGAGAACTTTCTC...TGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp CATGAGGACTCTAATGAAGAGGGTCTCCCCCTTGATGAATGGACCCACAGTGTCTTGCTCTTGGAGGGATaGGGCATCCAACAATCATGG +
Preference number: 4 (lower is better)
Translates to: HEDSNEEGLPLDEWTHSVLLLEG*GIQQSW
Trigger: CCATGATTGTTGGATGCCCCATCCCTCCAAGAGCAA...GACACTGTGGGTCCATTCATCAAGGGGGAGACCCTCTTCATTAGAGTCCTCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp AAGCCACCTCCTCAACCCAAGACACACCTCACTCCAGATCTACTACTAGAGAGATGCCCAAATTGCTCTTaGAGGGATGGGGCATCCAAC +
Preference number: 4 (lower is better)
Translates to: KPPPQPKTHLTPDLLLERCPNCS*RDGASN
Trigger: GTTGGATGCCCCATCCCTCCAAGAGCAATTTGGGCA...TCTCTCTAGTAGTAGATCTGGAGTGAGGTGTGTCTTGGGTTGAGGAGGTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCTCTCTCTGTGTAGCCTaGGAGAGGCTGAACTTCCTC +
Preference number: 4 (lower is better)
Translates to: GKCQSLSYSVSSAPQFTSSLCVA*ERLNFL
Trigger: GAGGAAGTTCAGCCTCTCCCAGGCTACACAGAGAGA...GCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp AAGCCACCTCCTCAACCCAAGACACACCTCACTCCAGATCTACTACTAGAGAGATGGGTGGCCTGGCATTaGAAGGAGTCTTGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: KPPPQPKTHLTPDLLLERWVAWH*KESCLF
Trigger: AAAGAGGCAAGACTCCTTCCAATGCCAGGCCACCCA...TCTCTCTAGTAGTAGATCTGGAGTGAGGTGTGTCTTGGGTTGAGGAGGTGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GGGTGGAGAAAAAGGCAGGGTAATTACAGAGAGCACTGTGTTCCCTGGACAATTGCTATCTGGGTGGCCTaGCATTGGAAGGAGTCTTGC +
Preference number: 4 (lower is better)
Translates to: GWRKRQGNYREHCVPWTIAIWVA*HWKESC
Trigger: GCAAGACTCCTTCCAATGCCAGGCCACCCAGATAGC...AATTGTCCAGGGAACACAGTGCTCTCTGTAATTACCCTGCCTTTTTCTCCACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp ATTAAAAGCACTGTAGCTGCAGTGAGTCCATTGTTCTCTCTATCCAACTGTCCCGTGTGCTTGCGTGCATaGTGGGGGTACCACTCCGCA +
Preference number: 4 (lower is better)
Translates to: IKSTVAAVSPLFSLSNCPVCLRA*WGYHSA
Trigger: TGCGGAGTGGTACCCCCACCATGCACGCAAGCACAC...GGGACAGTTGGATAGAGAGAACAATGGACTCACTGCAGCTACAGTGCTTTTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GTTCTCTCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAAAGCTCACCATTCCTTaGCCCAGACCATTGCTCTAC +
Preference number: 4 (lower is better)
Translates to: VLSIQLSLLLYGDEHGAAKLTIP*PRPLLY
Trigger: GTAGAGCAATGGTCTGGGCCAAGGAATGGTGAGCTT...TGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR CAA 72 bp TTCTGCGGACCAATCCTGCATCTCAATCTGAGGTGCTaGTATCATCTCTCTCTGTGTAGCCTGGGAGAGGCT +
Preference number: 4 (lower is better)
Translates to: FCGPILHLNLRC*YHLSLCSLGEA
Trigger: AGCCTCTCCCAGGCTACACAGAGAGAGATGATACAAGCACCTCAGATTGAGATGCAGGATTGGTCCGCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR CAA 72 bp TCTGGGTGGCCTGGCATTGGAAGGAGTCTTGCCTCTTaGTGCTGCAACATCTCTGGAAATGGGTATGCAGAA +
Preference number: 4 (lower is better)
Translates to: SGWPGIGRSLAS*CCNISGNGYAE
Trigger: TTCTGCATACCCATTTCCAGAGATGTTGCAGCACAAAGAGGCAAGACTCCTTCCAATGCCAGGCCACCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR CAA 72 bp TCTTGCTATCTGGGTGGCCTGGCATTGGAAGGAGTCTaGCCTCTTTGTGCTGCAACATCTCTGGAAATGGGT +
Preference number: 4 (lower is better)
Translates to: SCYLGGLALEGV*PLCAATSLEMG
Trigger: ACCCATTTCCAGAGATGTTGCAGCACAAAGAGGCAAGACTCCTTCCAATGCCAGGCCACCCAGATAGCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR CAA 72 bp ATAGAAGCCTGCTTAAGAGGGACCCTAACTGCCTCCTaGAGGAGTAAGGAGTCAGAGGAAGACCCTAAGCTC +
Preference number: 4 (lower is better)
Translates to: IEACLRGTLTAS*RSKESEEDPKL
Trigger: GAGCTTAGGGTCTTCCTCTGACTCCTTACTCCTCAAGGAGGCAGTTAGGGTCCCTCTTAAGCAGGCTTCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp CTCTCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGCTCAGGCTTCTGATCACTaGCATCTGGATTGCTTACTT +
Preference number: 4 (lower is better)
Translates to: LSIQLSLLLYGDEHGAAAQASDH*HLDCLL
Trigger: AAGTAAGCAATCCAGATGTCAGTGATCAGAAGCCTG...AGCTGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000540618.5
CDS-3UTR TCA 90 bp CTCTCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGCTGATGTTTCAGGCTTCTaGTCACTGACATCTGGATTG +
Preference number: 4 (lower is better)
Translates to: LSIQLSLLLYGDEHGAAADVSGF*SLTSGL
Trigger: CAATCCAGATGTCAGTGATCAGAAGCCTGAAACATC...AGCTGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000540618.5
CDS-3UTR TCA 90 bp CCAGAGGTCGAGAGATGCTCCTGCATTTGGCCCAGGATTAAGTTTTGGGCCATGGATGTTTCAGGCTTCTaGTCACTGACATCTGGATTG +
Preference number: 4 (lower is better)
Translates to: PEVERCSCIWPRIKFWAMDVSGF*SLTSGL
Trigger: CAATCCAGATGTCAGTGATCAGAAGCCTGAAACATC...CATGGCCCAAAACTTAATCCTGGGCCAAATGCAGGAGCATCTCTCGACCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373871.8
ENST00000540618.5
CDS-3UTR TCA 90 bp CCAGAGGTCGAGAGATGCTCCTGCATTTGGCCCAGGATTAAGTTTTGGGCCATGGGTATAATCATTGGATaGGCGAGGGATGTAATCGGT +
Preference number: 4 (lower is better)
Translates to: PEVERCSCIWPRIKFWAMGIIIG*ARDVIG
Trigger: ACCGATTACATCCCTCGCTCATCCAATGATTATACC...CATGGCCCAAAACTTAATCCTGGGCCAAATGCAGGAGCATCTCTCGACCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp GACCAAGAAGGAAGAAGCTGCAGGGACGAGCATCTGATGGGAAATGGGTGCTTCGGATCCAGTAAGAAGTaGGTGGAAGATGATGATGGT +
Preference number: 4 (lower is better)
Translates to: DQEGRSCRDEHLMGNGCFGSSKK*VEDDDG
Trigger: ACCATCATCATCTTCCACTCACTTCTTACTGGATCC...GAAGCACCCATTTCCCATCAGATGCTCGTCCCTGCAGCTTCTTCCTTCTTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp GTTCTCTCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCATACCTCCTGAGCCACTaGAACCATCTGTTGAGAAAC +
Preference number: 4 (lower is better)
Translates to: VLSIQLSLLLYGDEHGAAYLLSH*NHLLRN
Trigger: GTTTCTCAACAGATGGTTTCAGTGGCTCAGGAGGTA...TGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp AAGCCACCTCCTCAACCCAAGACACACCTCACTCCAGATCTACTACTAGAGAGAAGCTCTAAAGCCTGGTaGAGGGATACTAGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: KPPPQPKTHLTPDLLLERSSKAW*RDTRSP
Trigger: TGGAGACCTAGTATCCCTTCACCAGGCTTTAGAGCT...TCTCTCTAGTAGTAGATCTGGAGTGAGGTGTGTCTTGGGTTGAGGAGGTGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp GGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCAGCTCTAAAGCCTGGTaGAGGGATACTAGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: GKCQSLSYSVSSAPQFTSSSKAW*RDTRSP
Trigger: TGGAGACCTAGTATCCCTTCACCAGGCTTTAGAGCT...GCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp CTCTCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGCTTCCTGTGATACAGTCTaGATGACAGTCAAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: LSIQLSLLLYGDEHGAAASCDTV*MTVKLK
Trigger: CTTCAGCTTGACTGTCATTCAGACTGTATCACAGGA...AGCTGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp TCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGCTCACAAGCTAAGCCTCCTGTaGTACAGTCTGAATGACAGT +
Preference number: 4 (lower is better)
Translates to: SIQLSLLLYGDEHGAAAHKLSLL*YSLNDS
Trigger: ACTGTCATTCAGACTGTATCACAGGAGGCTTAGCTT...GTGAGCTGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp GAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCTAGCAGGGACGAGCATCTaGTGGGAAATGGGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: EMPKFKLLSVQCPTVHQLAGTSI*WEMGAS
Trigger: AGAAGCACCCATTTCCCATCAGATGCTCGTCCCTGC...TAGCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp ACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGTGGGCTGGAAGGCTGTaGCTAGTGCCTGGGCACCCA +
Preference number: 4 (lower is better)
Translates to: TCVKDQTLTYKNNIHIRWWAGRL*LVPGHP
Trigger: TGGGTGCCCAGGCACTAGTCACAGCCTTCCAGCCCA...CCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp GAGGACTCTAATGAAGAGGGTCTCCCCCTTGATGAATGGACCCACAGTGTCCTTTCTAGGCAACTATGCTaGATACAGACCAAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: EDSNEEGLPLDEWTHSVLSRQLC*IQTKGR
Trigger: CCTTCCCTTGGTCTGTATTCAGCATAGTTGCCTAGA...AAGGACACTGTGGGTCCATTCATCAAGGGGGAGACCCTCTTCATTAGAGTCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp CATGAGGACTCTAATGAAGAGGGTCTCCCCCTTGATGAATGGACCCACAGTGTCTCTAGGCAACTATGCTaGATACAGACCAAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: HEDSNEEGLPLDEWTHSVSRQLC*IQTKGR
Trigger: CCTTCCCTTGGTCTGTATTCAGCATAGTTGCCTAGA...GACACTGTGGGTCCATTCATCAAGGGGGAGACCCTCTTCATTAGAGTCCTCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp GGGTGGAGAAAAAGGCAGGGTAATTACAGAGAGCACTGTGTTCCCTGGACAATTCATAGGGGGAGGGTTTaGGGCCTCAGAGTAAAACCT +
Preference number: 4 (lower is better)
Translates to: GWRKRQGNYREHCVPWTIHRGRV*GLRVKP
Trigger: AGGTTTTACTCTGAGGCCTCAAACCCTCCCCCTATG...AATTGTCCAGGGAACACAGTGCTCTCTGTAATTACCCTGCCTTTTTCTCCACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp ATTAAAAGCACTGTAGCTGCAGTGAGTCCATTGTTCTCTCTATCCAACTGTCCCCTTGCCAGAGCTGTCTaGCTCAGAGGAGAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: IKSTVAAVSPLFSLSNCPLARAV*LRGEEG
Trigger: CCCTTCCTCTCCTCTGAGTCAGACAGCTCTGGCAAG...GGGACAGTTGGATAGAGAGAACAATGGACTCACTGCAGCTACAGTGCTTTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp CTCTCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGCTGGGAGAGTCGCATTTTaGGTAGAAGTCGTCCTTAAT +
Preference number: 4 (lower is better)
Translates to: LSIQLSLLLYGDEHGAAAGRVAF*VEVVLN
Trigger: ATTAAGGACGACTTCTACTCAAAATGCGACTCTCCC...AGCTGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp GGGTGGAGAAAAAGGCAGGGTAATTACAGAGAGCACTGTGTTCCCTGGACAATTGCTAACAGAGGCATCTaGAGTTCAGAGGGAGAGTCG +
Preference number: 4 (lower is better)
Translates to: GWRKRQGNYREHCVPWTIANRGI*SSEGES
Trigger: CGACTCTCCCTCTGAACTTCAGATGCCTCTGTTAGC...AATTGTCCAGGGAACACAGTGCTCTCTGTAATTACCCTGCCTTTTTCTCCACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp TCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGCTCACTGCTCTGGTAAATCTTaGTCTTCTTCCATGAGGACC +
Preference number: 4 (lower is better)
Translates to: SIQLSLLLYGDEHGAAAHCSGKS*SSSMRT
Trigger: GGTCCTCATGGAAGAAGAGCAAGATTTACCAGAGCA...GTGAGCTGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp ATTAAAAGCACTGTAGCTGCAGTGAGTCCATTGTTCTCTCTATCCAACTGTCCCTCTCTGTGCTGCAGGTaGAGGCGCCATGACACTAGG +
Preference number: 4 (lower is better)
Translates to: IKSTVAAVSPLFSLSNCPSLCCR*RRHDTR
Trigger: CCTAGTGTCATGGCGCCTGCACCTGCAGCACAGAGA...GGGACAGTTGGATAGAGAGAACAATGGACTCACTGCAGCTACAGTGCTTTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCTACAGATGAACCATGGCTaGCACTACCTCCTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: EMPKFKLLSVQCPTVHQLQMNHG*HYLLSH
Trigger: GTGGCTCAGGAGGTAGTGGCAGCCATGGTTCATCTG...TAGCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp CATGAGGACTCTAATGAAGAGGGTCTCCCCCTTGATGAATGGACCCACAGTGTCGGGATAAGAATAATGTaGTGGGCTTGGCTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: HEDSNEEGLPLDEWTHSVGIRIM*WAWLAC
Trigger: ACAAGCCAGCCAAGCCCAGCACATTATTCTTATCCC...GACACTGTGGGTCCATTCATCAAGGGGGAGACCCTCTTCATTAGAGTCCTCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373871.8
ENST00000436342.6
CDS-3UTR GCA 90 bp GACCAAGAAGGAAGAAGCTGCAGGGACGAGCATCTGATGGGAAATGGGTGCTTCGTTGTGCTGTTTGGCTaGAATTTCTTCATCTCGTCC +
Preference number: 4 (lower is better)
Translates to: DQEGRSCRDEHLMGNGCFVVLFG*NFFISS
Trigger: GGACGAGATGAAGAAATTGCAGCCAAACAGCACAAC...GAAGCACCCATTTCCCATCAGATGCTCGTCCCTGCAGCTTCTTCCTTCTTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GAGGACTCTAATGAAGAGGGTCTCCCCCTTGATGAATGGACCCACAGTGTCCTTAAAGTGGGGGAAACCTaGGTCAAAGATCAGACCCTT +
Preference number: 4 (lower is better)
Translates to: EDSNEEGLPLDEWTHSVLKVGET*VKDQTL
Trigger: AAGGGTCTGATCTTTGACGCAGGTTTCCCCCACTTT...AAGGACACTGTGGGTCCATTCATCAAGGGGGAGACCCTCTTCATTAGAGTCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp CCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGAGGGACTGGCCAGAGCTaGCTGGAGGTGGACATGAGG +
Preference number: 4 (lower is better)
Translates to: PASKIRPLPIKITYTFAGGTGQS*LEVDMR
Trigger: CCTCATGTCCACCTCCAGGCAGCTCTGGCCAGTCCC...TCCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp ATTAAAAGCACTGTAGCTGCAGTGAGTCCATTGTTCTCTCTATCCAACTGTCCCCCAGCCTCTCTCTCTTaGTATCTGGGTGGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: IKSTVAAVSPLFSLSNCPPASLS*YLGGLA
Trigger: TGCCAGGCCACCCAGATAGCAAGAGAGAGAGGCTGG...GGGACAGTTGGATAGAGAGAACAATGGACTCACTGCAGCTACAGTGCTTTTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp ACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGCTGGACACTACCAGCTaGCCCAGGGGCACTGGACAG +
Preference number: 4 (lower is better)
Translates to: TCVKDQTLTYKNNIHIRWLDTTS*PRGTGQ
Trigger: CTGTCCAGTGCCCCTGGGGCAGCTGGTAGTGTCCAG...CCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GAGGAAGGGACAGATGGCCTGCTGACTGGGGCTGAGGCAGAACTAGATTTTCTCGCTGCAGCTAGAGTTTaGAAGTCAGATTCTATTTGG +
Preference number: 4 (lower is better)
Translates to: EEGTDGLLTGAEAELDFLAAARV*KSDSIW
Trigger: CCAAATAGAATCTGACTTGCAAACTCTAGCTGCAGC...GAGAAAATCTAGTTCTGCCTCAGCCCCAGTCAGCAGGCCATCTGTCCCTTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp TCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGCTCACGGCTACTGCTGCTGCTaGAATATTGGCAATTGTAGA +
Preference number: 4 (lower is better)
Translates to: SIQLSLLLYGDEHGAAAHGYCCC*NIGNCR
Trigger: TCTACAATTGCCAATATTCCAGCAGCAGCAGTAGCC...GTGAGCTGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp CATGAGGACTCTAATGAAGAGGGTCTCCCCCTTGATGAATGGACCCACAGTGTCTGGTTGCTGCTAATGTaGTGCTCTCTGCATCACTGT +
Preference number: 4 (lower is better)
Translates to: HEDSNEEGLPLDEWTHSVWLLLM*CSLHHC
Trigger: ACAGTGATGCAGAGAGCACCACATTAGCAGCAACCA...GACACTGTGGGTCCATTCATCAAGGGGGAGACCCTCTTCATTAGAGTCCTCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GTTCTCTCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCACTAGGCTTCTCCGACTaGTATGTGGTTGCTGCTAAT +
Preference number: 4 (lower is better)
Translates to: VLSIQLSLLLYGDEHGAALGFSD*YVVAAN
Trigger: ATTAGCAGCAACCACATACCAGTCGGAGAAGCCTAG...TGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GAGGACTCTAATGAAGAGGGTCTCCCCCTTGATGAATGGACCCACAGTGTCCTTTGTCTTGGGAAGAAGTaGCATCAGCTTTCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: EDSNEEGLPLDEWTHSVLCLGKK*HQLSSC
Trigger: GCAAGAGGAAAGCTGATGCCACTTCTTCCCAAGACA...AAGGACACTGTGGGTCCATTCATCAAGGGGGAGACCCTCTTCATTAGAGTCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp CATGAGGACTCTAATGAAGAGGGTCTCCCCCTTGATGAATGGACCCACAGTGTCTGTCTTGGGAAGAAGTaGCATCAGCTTTCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: HEDSNEEGLPLDEWTHSVCLGKK*HQLSSC
Trigger: GCAAGAGGAAAGCTGATGCCACTTCTTCCCAAGACA...GACACTGTGGGTCCATTCATCAAGGGGGAGACCCTCTTCATTAGAGTCCTCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GAGAGCCCTCACCGTGACATTACAGACCCATCCTGTAGAACCCACAGTGCCTGGCCAGTAAGAAGTGAGTaGAAGATGATGATGGTTTCA +
Preference number: 4 (lower is better)
Translates to: ESPHRDITDPSCRTHSAWPVRSE*KMMMVS
Trigger: TGAAACCATCATCATCTTCCACTCACTTCTTACTGG...CCAGGCACTGTGGGTTCTACAGGATGGGTCTGTAATGTCACGGTGAGGGCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp CCATGGATAAAGACAGAGAGAGAGAGAGAGAGAGAGGCAGAGAGGGAGGGAGAGTCTTCCACATGTACCTaGTCACACTCCTCTAAGTCA +
Preference number: 4 (lower is better)
Translates to: PWIKTEREREREAEREGESSTCT*SHSSKS
Trigger: TGACTTAGAGGAGTGTGACCAGGTACATGTGGAAGA...CTCTCCCTCCCTCTCTGCCTCTCTCTCTCTCTCTCTCTCTGTCTTTATCCATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp TCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGCTCACTCTTCCACATGTACCTaGTCACACTCCTCTAAGTCA +
Preference number: 4 (lower is better)
Translates to: SIQLSLLLYGDEHGAAAHSSTCT*SHSSKS
Trigger: TGACTTAGAGGAGTGTGACCAGGTACATGTGGAAGA...GTGAGCTGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp CTCTCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGCTTCTTCCACATGTACCTaGTCACACTCCTCTAAGTCA +
Preference number: 4 (lower is better)
Translates to: LSIQLSLLLYGDEHGAAASSTCT*SHSSKS
Trigger: TGACTTAGAGGAGTGTGACCAGGTACATGTGGAAGA...AGCTGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp AGATGGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCCCACAGATGAACCATaGCTGCCACTACCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: RWEMPKFKLLSVQCPTVHPTDEP*LPLPPE
Trigger: CTCAGGAGGTAGTGGCAGCCATGGTTCATCTGTGGG...GTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp TCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGCTCACATAAGAATAATGTGCTaGGCTTGGCTGGCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: SIQLSLLLYGDEHGAAAHIRIMC*AWLACG
Trigger: ACCACAAGCCAGCCAAGCCCAGCACATTATTCTTAT...GTGAGCTGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373871.8
ENST00000436342.6
CDS-3UTR CCA 90 bp AAGCCACCTCCTCAACCCAAGACACACCTCACTCCAGATCTACTACTAGAGAGAGAGAAAGTTCTCAGTTaGTTCCAGTCTCCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: KPPPQPKTHLTPDLLLEREKVLS*FQSPAP
Trigger: GGGAGCTGGAGACTGGAACCAACTGAGAACTTTCTC...TCTCTCTAGTAGTAGATCTGGAGTGAGGTGTGTCTTGGGTTGAGGAGGTGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GTTCTCTCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCACTCGCCAGCATTCCATaGATAAAGACAGAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: VLSIQLSLLLYGDEHGAALASIP*IKTERE
Trigger: CTCTCTCTCTGTCTTTATCCATGGAATGCTGGCGAG...TGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp CATGAGGACTCTAATGAAGAGGGTCTCCCCCTTGATGAATGGACCCACAGTGTCCTCGCCAGCATTCCATaGATAAAGACAGAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: HEDSNEEGLPLDEWTHSVLASIP*IKTERE
Trigger: CTCTCTCTCTGTCTTTATCCATGGAATGCTGGCGAG...GACACTGTGGGTCCATTCATCAAGGGGGAGACCCTCTTCATTAGAGTCCTCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp TCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGCTCACGCTAGAAAAAGAAAGTaGGGGAAACCTGCGTCAAAG +
Preference number: 4 (lower is better)
Translates to: SIQLSLLLYGDEHGAAAHARKRK*GKPASK
Trigger: CTTTGACGCAGGTTTCCCCCACTTTCTTTTTCTAGC...GTGAGCTGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GAGGAAGGGACAGATGGCCTGCTGACTGGGGCTGAGGCAGAACTAGATTTTCTCACAAGCAATTATAGCTaGGGTTGGTCAACAATGCCT +
Preference number: 4 (lower is better)
Translates to: EEGTDGLLTGAEAELDFLTSNYS*GWSTMP
Trigger: AGGCATTGTTGACCAACCCCAGCTATAATTGCTTGT...GAGAAAATCTAGTTCTGCCTCAGCCCCAGTCAGCAGGCCATCTGTCCCTTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GAGGAAGGGACAGATGGCCTGCTGACTGGGGCTGAGGCAGAACTAGATTTTCTCCAACATCTCTGGAAATaGGTATGCAGAATCTCTGGT +
Preference number: 4 (lower is better)
Translates to: EEGTDGLLTGAEAELDFLQHLWK*VCRISG
Trigger: ACCAGAGATTCTGCATACCCATTTCCAGAGATGTTG...GAGAAAATCTAGTTCTGCCTCAGCCCCAGTCAGCAGGCCATCTGTCCCTTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp TTACATTCTAAAATAAAGAGCTCCCAAAAGGGTGGAGAGGGAAGTATCTGTGTGTGCTTGCGTGCATGGTaGGGGTACCACTCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: LHSKIKSSQKGGEGSICVCLRAW*GYHSAA
Trigger: GGCTGCGGAGTGGTACCCCCACCATGCACGCAAGCA...CACACAGATACTTCCCTCTCCACCCTTTTGGGAGCTCTTTATTTTAGAATGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp AAGCCACCTCCTCAACCCAAGACACACCTCACTCCAGATCTACTACTAGAGAGAACTGCGAACAAGCTGTaGCATCAGTCTCTTGGGACA +
Preference number: 4 (lower is better)
Translates to: KPPPQPKTHLTPDLLLERTANKL*HQSLGT
Trigger: TGTCCCAAGAGACTGATGCCACAGCTTGTTCGCAGT...TCTCTCTAGTAGTAGATCTGGAGTGAGGTGTGTCTTGGGTTGAGGAGGTGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp TCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGCTCACAGTCTGGGACAAAGATaGACTTGTAGAAGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: SIQLSLLLYGDEHGAAAHSLGQR*TCRRVR
Trigger: TCTGACCCTTCTACAAGTCCATCTTTGTCCCAGACT...GTGAGCTGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373864.5
CDS-3UTR TCA 90 bp GAGAGCCCTCACCGTGACATTACAGACCCATCCTGTAGAACCCACAGTGCCTGGCTTGCTCTTCTTCCATaGGGACCAATATTTCTTTAT +
Preference number: 4 (lower is better)
Translates to: ESPHRDITDPSCRTHSAWLALLP*GPIFLY
Trigger: ATAAAGAAATATTGGTCCTCATGGAAGAAGAGCAAG...CCAGGCACTGTGGGTTCTACAGGATGGGTCTGTAATGTCACGGTGAGGGCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp GTTCTCTCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCACAGGCTTCTGATCACTaGCATCTGGATTGCTTACTT +
Preference number: 4 (lower is better)
Translates to: VLSIQLSLLLYGDEHGAAQASDH*HLDCLL
Trigger: AAGTAAGCAATCCAGATGTCAGTGATCAGAAGCCTG...TGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000540618.5
CDS-3UTR TCA 90 bp CCAGAGGTCGAGAGATGCTCCTGCATTTGGCCCAGGATTAAGTTTTGGGCCATGTTCCGAAACAGGAACTaGGAGAATATGTGCATAAGG +
Preference number: 4 (lower is better)
Translates to: PEVERCSCIWPRIKFWAMFRNRN*ENMCIR
Trigger: CCTTATGCACATATTCTCTCAGTTCCTGTTTCGGAA...CATGGCCCAAAACTTAATCCTGGGCCAAATGCAGGAGCATCTCTCGACCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp GCTCTTCAGTTTCAGGCAGAGATCTGGGTAAATACATACCTGGGACATCCTTCAGGGATAATCCTGGTTTaGGATGCTGGCTACTGCTGC +
Preference number: 4 (lower is better)
Translates to: ALQFQAEIWVNTYLGHPSGIILV*DAGYCC
Trigger: GCAGCAGTAGCCAGCATCTCAAACCAGGATTATCCC...TGAAGGATGTCCCAGGTATGTATTTACCCAGATCTCTGCCTGAAACTGAAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp ATTAAAAGCACTGTAGCTGCAGTGAGTCCATTGTTCTCTCTATCCAACTGTCCCCTGAACACCCACAGATaGACCATGGCTGCCACTACC +
Preference number: 4 (lower is better)
Translates to: IKSTVAAVSPLFSLSNCPLNTHR*TMAATT
Trigger: GGTAGTGGCAGCCATGGTTCATCTGTGGGTGTTCAG...GGGACAGTTGGATAGAGAGAACAATGGACTCACTGCAGCTACAGTGCTTTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp GCTCTTCAGTTTCAGGCAGAGATCTGGGTAAATACATACCTGGGACATCCTTCAAGCTCCCTTCAGGAGTaGAAAGGAGCTCAAGGGGAA +
Preference number: 4 (lower is better)
Translates to: ALQFQAEIWVNTYLGHPSSSLQE*KGAQGE
Trigger: TTCCCCTTGAGCTCCTTTTCACTCCTGAAGGGAGCT...TGAAGGATGTCCCAGGTATGTATTTACCCAGATCTCTGCCTGAAACTGAAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp CCTGGCATTGGAAGGAGTCTTGCCTCTTTGTGCTGCAACATCTCTGGAAATGGGTCCTGTGATACAGTCTaGATGACAGTCAAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: PGIGRSLASLCCNISGNGSCDTV*MTVKLK
Trigger: CTTCAGCTTGACTGTCATTCAGACTGTATCACAGGA...CCCATTTCCAGAGATGTTGCAGCACAAAGAGGCAAGACTCCTTCCAATGCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp AAAGGGACTGGAAAGAAGACTAAGGCTTCTAGATGGGAAATGCCAAAGTTTAAGGGTGGGAGGATCGCTTaGGGCCAGGTGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: KGTGKKTKASRWEMPKFKGGRIA*GQVFKT
Trigger: GGTCTTGAACACCTGGCCTCAAGCGATCCTCCCACC...CTTAAACTTTGGCATTTCCCATCTAGAAGCCTTAGTCTTCTTTCCAGTCCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp CCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGAGGTGGGAGGATCGCTTaGGGCCAGGTGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: PASKIRPLPIKITYTFAGGGRIA*GQVFKT
Trigger: GGTCTTGAACACCTGGCCTCAAGCGATCCTCCCACC...TCCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp CATGAGGACTCTAATGAAGAGGGTCTCCCCCTTGATGAATGGACCCACAGTGTCTCTCTTCCATTTAAATaGGGGTGGCAACAACCAGGA +
Preference number: 4 (lower is better)
Translates to: HEDSNEEGLPLDEWTHSVSLPFK*GWQQPG
Trigger: TCCTGGTTGTTGCCACCCTCATTTAAATGGAAGAGA...GACACTGTGGGTCCATTCATCAAGGGGGAGACCCTCTTCATTAGAGTCCTCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp ATTAAAAGCACTGTAGCTGCAGTGAGTCCATTGTTCTCTCTATCCAACTGTCCCAGAGAGCCCTCACCGTaGCATTACAGACCCATCCTG +
Preference number: 4 (lower is better)
Translates to: IKSTVAAVSPLFSLSNCPREPSP*HYRPIL
Trigger: CAGGATGGGTCTGTAATGTCACGGTGAGGGCTCTCT...GGGACAGTTGGATAGAGAGAACAATGGACTCACTGCAGCTACAGTGCTTTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCGCTGGCTACTGCTGCTaGTGGAATATTGGCAATTGT +
Preference number: 4 (lower is better)
Translates to: GKCQSLSYSVSSAPQFTSAGYCC*WNIGNC
Trigger: ACAATTGCCAATATTCCAGCAGCAGCAGTAGCCAGC...GCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp TATAACATTACGGTCACGGATTCTACAGCCACAAATGCCCGCAGTCACATAAATTCTCTGTGCTGCAGGTaGAGGCGCCATGACACTAGG +
Preference number: 4 (lower is better)
Translates to: YNITVTDSTATNARSHINSLCCR*RRHDTR
Trigger: CCTAGTGTCATGGCGCCTGCACCTGCAGCACAGAGA...ATTTATGTGACTGCGGGCATTTGTGGCTGTAGAATCCGTGACCGTAATGTTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp TCTACAGCCACAAATGCCCGCAGTCACATAAATATATCCAATCCAATCAATGCCTCTCTGTGCTGCAGGTaGAGGCGCCATGACACTAGG +
Preference number: 4 (lower is better)
Translates to: STATNARSHINISNPINASLCCR*RRHDTR
Trigger: CCTAGTGTCATGGCGCCTGCACCTGCAGCACAGAGA...GGCATTGATTGGATTGGATATATTTATGTGACTGCGGGCATTTGTGGCTGTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp AAGCCACCTCCTCAACCCAAGACACACCTCACTCCAGATCTACTACTAGAGAGATCTGCTCTTAATCTCTaGAGTGCTTCCTTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: KPPPQPKTHLTPDLLLERSALNL*SASFLW
Trigger: CCAGAGGAAGGAAGCACTGCAGAGATTAAGAGCAGA...TCTCTCTAGTAGTAGATCTGGAGTGAGGTGTGTCTTGGGTTGAGGAGGTGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCGGGATAAGAATAATGTaGTGGGCTTGGCTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: GKCQSLSYSVSSAPQFTSGIRIM*WAWLAC
Trigger: ACAAGCCAGCCAAGCCCAGCACATTATTCTTATCCC...GCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373871.8
ENST00000436342.6
CDS-3UTR GCA 90 bp CCTGGCATTGGAAGGAGTCTTGCCTCTTTGTGCTGCAACATCTCTGGAAATGGGTCAGGCTGGCATTTGTaGTTGAAGCTTGAATGGGAT +
Preference number: 4 (lower is better)
Translates to: PGIGRSLASLCCNISGNGSGWHL*LKLEWD
Trigger: ATCCCATTCAAGCTTCAAGCACAAATGCCAGCCTGA...CCCATTTCCAGAGATGTTGCAGCACAAAGAGGCAAGACTCCTTCCAATGCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373871.8
ENST00000436342.6
CDS-3UTR GCA 90 bp GAGGACTCTAATGAAGAGGGTCTCCCCCTTGATGAATGGACCCACAGTGTCCTTGTTGTGCTGTTTGGCTaGAATTTCTTCATCTCGTCC +
Preference number: 4 (lower is better)
Translates to: EDSNEEGLPLDEWTHSVLVVLFG*NFFISS
Trigger: GGACGAGATGAAGAAATTGCAGCCAAACAGCACAAC...AAGGACACTGTGGGTCCATTCATCAAGGGGGAGACCCTCTTCATTAGAGTCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GTTCTCTCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCACTATCCAACTGTCCCTaGTTCTGTATGGAGATGAAC +
Preference number: 4 (lower is better)
Translates to: VLSIQLSLLLYGDEHGAALSNCP*FCMEMN
Trigger: GTTCATCTCCATACAGAAGCAGGGACAGTTGGATAG...TGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GAGGACTCTAATGAAGAGGGTCTCCCCCTTGATGAATGGACCCACAGTGTCCTTCTATCCAACTGTCCCTaGTTCTGTATGGAGATGAAC +
Preference number: 4 (lower is better)
Translates to: EDSNEEGLPLDEWTHSVLLSNCP*FCMEMN
Trigger: GTTCATCTCCATACAGAAGCAGGGACAGTTGGATAG...AAGGACACTGTGGGTCCATTCATCAAGGGGGAGACCCTCTTCATTAGAGTCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GTTCTCTCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCACTAAGAGTGCAACTCTaGCCCAGGAATTTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: VLSIQLSLLLYGDEHGAALRVQL*PRNFLF
Trigger: GAAAAGGAAATTCCTGGGGCAGAGTTGCACTCTTAG...TGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp ACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGGGGCACCCACCAATCTaGCCAGAGGTCGAGAGATGC +
Preference number: 4 (lower is better)
Translates to: TCVKDQTLTYKNNIHIRWGHPPI*PEVERC
Trigger: GCATCTCTCGACCTCTGGGCAGATTGGTGGGTGCCC...CCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp CCATGGATAAAGACAGAGAGAGAGAGAGAGAGAGAGGCAGAGAGGGAGGGAGAGCATCTCAATCTGAGGTaGTTGTATCATCTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: PWIKTEREREREAEREGEHLNLR*LYHLSL
Trigger: CAGAGAGAGATGATACAAGCACCTCAGATTGAGATG...CTCTCCCTCCCTCTCTGCCTCTCTCTCTCTCTCTCTCTCTGTCTTTATCCATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp TCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGCTCACAGTCTTGCCTCTTTGTaGTGCAACATCTCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: SIQLSLLLYGDEHGAAAHSLASL*CNISGN
Trigger: ATTTCCAGAGATGTTGCAGCACAAAGAGGCAAGACT...GTGAGCTGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp TCTACAGCCACAAATGCCCGCAGTCACATAAATATATCCAATCCAATCAATGCCCTGTGTGTGTGTGCTTaGGTGCATGGTGGGGGTACC +
Preference number: 4 (lower is better)
Translates to: STATNARSHINISNPINALCVCA*VHGGGT
Trigger: GGTACCCCCACCATGCACGCAAGCACACACACACAG...GGCATTGATTGGATTGGATATATTTATGTGACTGCGGGCATTTGTGGCTGTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GCTCTTCAGTTTCAGGCAGAGATCTGGGTAAATACATACCTGGGACATCCTTCAAAAGAGAACCCACCATaGCCAGCTAGGGAAGGACTC +
Preference number: 4 (lower is better)
Translates to: ALQFQAEIWVNTYLGHPSKENPP*PAREGL
Trigger: GAGTCCTTCCCTAGCTGGGCATGGTGGGTTCTCTTT...TGAAGGATGTCCCAGGTATGTATTTACCCAGATCTCTGCCTGAAACTGAAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GAAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCCTGGACACTACCAGCTaGCCCAGGGGCACTGGACAG +
Preference number: 4 (lower is better)
Translates to: ETCVKDQTLTYKNNIHIRLDTTS*PRGTGQ
Trigger: CTGTCCAGTGCCCCTGGGGCAGCTGGTAGTGTCCAG...GCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp CCAGAGGTCGAGAGATGCTCCTGCATTTGGCCCAGGATTAAGTTTTGGGCCATGGCTGCAGCTAGAGTTTaGAAGTCAGATTCTATTTGG +
Preference number: 4 (lower is better)
Translates to: PEVERCSCIWPRIKFWAMAAARV*KSDSIW
Trigger: CCAAATAGAATCTGACTTGCAAACTCTAGCTGCAGC...CATGGCCCAAAACTTAATCCTGGGCCAAATGCAGGAGCATCTCTCGACCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GAGAGCCCTCACCGTGACATTACAGACCCATCCTGTAGAACCCACAGTGCCTGGTTATACTTATGTGACTaGATTGCAAGTCTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: ESPHRDITDPSCRTHSAWLYLCD*IASLSQ
Trigger: CTGAGAGAGACTTGCAATCCAGTCACATAAGTATAA...CCAGGCACTGTGGGTTCTACAGGATGGGTCTGTAATGTCACGGTGAGGGCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCTGTCTTGGGAAGAAGTaGCATCAGCTTTCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: GKCQSLSYSVSSAPQFTSCLGKK*HQLSSC
Trigger: GCAAGAGGAAAGCTGATGCCACTTCTTCCCAAGACA...GCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GAGGAAGGGACAGATGGCCTGCTGACTGGGGCTGAGGCAGAACTAGATTTTCTCCCAGTAAGAAGTGAGTaGAAGATGATGATGGTTTCA +
Preference number: 4 (lower is better)
Translates to: EEGTDGLLTGAEAELDFLPVRSE*KMMMVS
Trigger: TGAAACCATCATCATCTTCCACTCACTTCTTACTGG...GAGAAAATCTAGTTCTGCCTCAGCCCCAGTCAGCAGGCCATCTGTCCCTTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp AGATGGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACAGGGCTGGAACCAGCTaGGTGGTAGTGATCAGAACA +
Preference number: 4 (lower is better)
Translates to: RWEMPKFKLLSVQCPTVHRAGTS*VVVIRT
Trigger: TGTTCTGATCACTACCACCCAGCTGGTTCCAGCCCT...GTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp CTCTCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGCTGCATGTTGTGCTGTTTaGCTGCAATTTCTTCATCTC +
Preference number: 4 (lower is better)
Translates to: LSIQLSLLLYGDEHGAAAACCAV*LQFLHL
Trigger: GAGATGAAGAAATTGCAGCCAAACAGCACAACATGC...AGCTGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCCTCGCCAGCATTCCATaGATAAAGACAGAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: GKCQSLSYSVSSAPQFTSLASIP*IKTERE
Trigger: CTCTCTCTCTGTCTTTATCCATGGAATGCTGGCGAG...GCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GAGAGCCCTCACCGTGACATTACAGACCCATCCTGTAGAACCCACAGTGCCTGGTCAGCAAAGTCTTTCTaGTTTCCTACTTTAGAATGG +
Preference number: 4 (lower is better)
Translates to: ESPHRDITDPSCRTHSAWSAKSF*FPTLEW
Trigger: CCATTCTAAAGTAGGAAACCAGAAAGACTTTGCTGA...CCAGGCACTGTGGGTTCTACAGGATGGGTCTGTAATGTCACGGTGAGGGCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp CCTGGCATTGGAAGGAGTCTTGCCTCTTTGTGCTGCAACATCTCTGGAAATGGGGTTCAAGACCAGCCTTaGCAACAATGTGAAAACCTG +
Preference number: 4 (lower is better)
Translates to: PGIGRSLASLCCNISGNGVQDQP*QQCENL
Trigger: CAGGTTTTCACATTGTTGCCAAGGCTGGTCTTGAAC...CCCATTTCCAGAGATGTTGCAGCACAAAGAGGCAAGACTCCTTCCAATGCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp ACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGGCTGTGACTAGTGCCTaGGCACCCACCAATCTGCCC +
Preference number: 4 (lower is better)
Translates to: TCVKDQTLTYKNNIHIRWAVTSA*APTNLP
Trigger: GGGCAGATTGGTGGGTGCCCAGGCACTAGTCACAGC...CCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp CATGAGGACTCTAATGAAGAGGGTCTCCCCCTTGATGAATGGACCCACAGTGTCGTGCTGCAACATCTCTaGAAATGGGTATGCAGAATC +
Preference number: 4 (lower is better)
Translates to: HEDSNEEGLPLDEWTHSVVLQHL*KWVCRI
Trigger: GATTCTGCATACCCATTTCCAGAGATGTTGCAGCAC...GACACTGTGGGTCCATTCATCAAGGGGGAGACCCTCTTCATTAGAGTCCTCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GAGGACTCTAATGAAGAGGGTCTCCCCCTTGATGAATGGACCCACAGTGTCCTTGTGCTGCAACATCTCTaGAAATGGGTATGCAGAATC +
Preference number: 4 (lower is better)
Translates to: EDSNEEGLPLDEWTHSVLVLQHL*KWVCRI
Trigger: GATTCTGCATACCCATTTCCAGAGATGTTGCAGCAC...AAGGACACTGTGGGTCCATTCATCAAGGGGGAGACCCTCTTCATTAGAGTCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCTATGGGTGGCCTGGCATTaGAAGGAGTCTTGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: EMPKFKLLSVQCPTVHQLWVAWH*KESCLF
Trigger: AAAGAGGCAAGACTCCTTCCAATGCCAGGCCACCCA...TAGCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp CCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGAGTGTGCTTGCGTGCATaGTGGGGGTACCACTCCGCA +
Preference number: 4 (lower is better)
Translates to: PASKIRPLPIKITYTFAGVCLRA*WGYHSA
Trigger: TGCGGAGTGGTACCCCCACCATGCACGCAAGCACAC...TCCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp CCATGGATAAAGACAGAGAGAGAGAGAGAGAGAGAGGCAGAGAGGGAGGGAGAGGAGCACTGTGTTCCCTaGACAATTCATTTTGGCAAA +
Preference number: 4 (lower is better)
Translates to: PWIKTEREREREAEREGEEHCVP*TIHFGK
Trigger: TTTGCCAAAATGAATTGTCCAGGGAACACAGTGCTC...CTCTCCCTCCCTCTCTGCCTCTCTCTCTCTCTCTCTCTCTGTCTTTATCCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GACCAAGAAGGAAGAAGCTGCAGGGACGAGCATCTGATGGGAAATGGGTGCTTCGAGCACTGTGTTCCCTaGACAATTCATTTTGGCAAA +
Preference number: 4 (lower is better)
Translates to: DQEGRSCRDEHLMGNGCFEHCVP*TIHFGK
Trigger: TTTGCCAAAATGAATTGTCCAGGGAACACAGTGCTC...GAAGCACCCATTTCCCATCAGATGCTCGTCCCTGCAGCTTCTTCCTTCTTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCTACTCCCCCTTGATGAATaGACCCACAGTGTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: EMPKFKLLSVQCPTVHQLLPLDE*THSVLW
Trigger: CCAAAGGACACTGTGGGTCCATTCATCAAGGGGGAG...TAGCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GAGAGCCCTCACCGTGACATTACAGACCCATCCTGTAGAACCCACAGTGCCTGGGGGAGTTCTAACTTCTaGATGAAAAAGGAAACCAAT +
Preference number: 4 (lower is better)
Translates to: ESPHRDITDPSCRTHSAWGSSNF*MKKETN
Trigger: ATTGGTTTCCTTTTTCATCCAGAAGTTAGAACTCCC...CCAGGCACTGTGGGTTCTACAGGATGGGTCTGTAATGTCACGGTGAGGGCTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR CAA 72 bp AATTTCATGAGGACTCTAATGAAGAGGGTCTCCCCCTaGATGAATGGACCCACAGTGTCCTTTGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: NFMRTLMKRVSP*MNGPTVSFGPQ
Trigger: CTGAGGACCAAAGGACACTGTGGGTCCATTCATCAAGGGGGAGACCCTCTTCATTAGAGTCCTCATGAAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp CCATGGATAAAGACAGAGAGAGAGAGAGAGAGAGAGGCAGAGAGGGAGGGAGAGTCTGGATTGCTTACTTaGCTTATAGTTTGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: PWIKTEREREREAEREGESGLLT*LIVCSP
Trigger: AGGAGAGCAAACTATAAGTCAAGTAAGCAATCCAGA...CTCTCCCTCCCTCTCTGCCTCTCTCTCTCTCTCTCTCTCTGTCTTTATCCATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373871.8
ENST00000540618.5
CDS-3UTR TCA 90 bp GGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCGGTATAATCATTGGATaGGCGAGGGATGTAATCGGT +
Preference number: 4 (lower is better)
Translates to: GKCQSLSYSVSSAPQFTSGIIIG*ARDVIG
Trigger: ACCGATTACATCCCTCGCTCATCCAATGATTATACC...GCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp GAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCTAGCATCACTGTTAGTCTaGCCTGTGACTCCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: EMPKFKLLSVQCPTVHQLASLLV*PVTPKL
Trigger: CAGCTTTGGAGTCACAGGTCAGACTAACAGTGATGC...TAGCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp AAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTCCTTCCTCTGGGGACTaGGGAGACCACCCACGTTGC +
Preference number: 4 (lower is better)
Translates to: KPASKIRPLPIKITYTFAPSSGD*GDHPRC
Trigger: GCAACGTGGGTGGTCTCCTCAGTCCCCAGAGGAAGG...AGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp GTTCTCTCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCACTTGGAGATGGAGTCTaGATTAAACCACTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: VLSIQLSLLLYGDEHGAALGDGV*IKPLSG
Trigger: ACCTGAAAGTGGTTTAATTCAGACTCCATCTCCAAG...TGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373871.8
ENST00000436342.6
CDS-3UTR TCA 90 bp GCTCTTCAGTTTCAGGCAGAGATCTGGGTAAATACATACCTGGGACATCCTTCAAGCTCTAAAGCCTGGTaGAGGGATACTAGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: ALQFQAEIWVNTYLGHPSSSKAW*RDTRSP
Trigger: TGGAGACCTAGTATCCCTTCACCAGGCTTTAGAGCT...TGAAGGATGTCCCAGGTATGTATTTACCCAGATCTCTGCCTGAAACTGAAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp GGGTGGAGAAAAAGGCAGGGTAATTACAGAGAGCACTGTGTTCCCTGGACAATTGCCTTGGCAACAATGTaGAAACCTGTCTGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: GWRKRQGNYREHCVPWTIALATM*KPVCFS
Trigger: GGAGAAACAGACAGGTTTTCACATTGTTGCCAAGGC...AATTGTCCAGGGAACACAGTGCTCTCTGTAATTACCCTGCCTTTTTCTCCACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp GTTCTCTCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGAATTTTATCCTGCCTaGGTAGATGCCCAAATTGCT +
Preference number: 4 (lower is better)
Translates to: VLSIQLSLLLYGDEHGAAEFYPA*VDAQIA
Trigger: AGCAATTTGGGCATCTACTCAGGCAGGATAAAATTC...TGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp CCAGAGGTCGAGAGATGCTCCTGCATTTGGCCCAGGATTAAGTTTTGGGCCATGCTTTTCAATGAGTTCTaGAGGAATGTGTATACCAGC +
Preference number: 4 (lower is better)
Translates to: PEVERCSCIWPRIKFWAMLFNEF*RNVYTS
Trigger: GCTGGTATACACATTCCTTCAGAACTCATTGAAAAG...CATGGCCCAAAACTTAATCCTGGGCCAAATGCAGGAGCATCTCTCGACCTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp TCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGCTCACCTTTTCAATGAGTTCTaGAGGAATGTGTATACCAGC +
Preference number: 4 (lower is better)
Translates to: SIQLSLLLYGDEHGAAAHLFNEF*RNVYTS
Trigger: GCTGGTATACACATTCCTTCAGAACTCATTGAAAAG...GTGAGCTGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCTGCTCTGGTAAATCTTaGTCTTCTTCCATGAGGACC +
Preference number: 4 (lower is better)
Translates to: GKCQSLSYSVSSAPQFTSCSGKS*SSSMRT
Trigger: GGTCCTCATGGAAGAAGAGCAAGATTTACCAGAGCA...GCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCTAAATCCTGGTTTGAGATaGTGGCTACTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: EMPKFKLLSVQCPTVHQLNPGLR*WLLLLL
Trigger: CAGCAGCAGCAGTAGCCAGCATCTCAAACCAGGATT...TAGCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp ACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGTCTCTGTGCTGCAGGTaGAGGCGCCATGACACTAGG +
Preference number: 4 (lower is better)
Translates to: TCVKDQTLTYKNNIHIRWSLCCR*RRHDTR
Trigger: CCTAGTGTCATGGCGCCTGCACCTGCAGCACAGAGA...CCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp TCTACAGCCACAAATGCCCGCAGTCACATAAATATATCCAATCCAATCAATGCCAGAGGAAAGTCTCTGTaGTGCAGGTGCAGGCGCCAT +
Preference number: 4 (lower is better)
Translates to: STATNARSHINISNPINARGKSL*CRCRRH
Trigger: ATGGCGCCTGCACCTGCAGCACAGAGACTTTCCTCT...GGCATTGATTGGATTGGATATATTTATGTGACTGCGGGCATTTGTGGCTGTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp TATAACATTACGGTCACGGATTCTACAGCCACAAATGCCCGCAGTCACATAAATCAGATGAACCATGGCTaGCACTACCTCCTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: YNITVTDSTATNARSHINQMNHG*HYLLSH
Trigger: GTGGCTCAGGAGGTAGTGGCAGCCATGGTTCATCTG...ATTTATGTGACTGCGGGCATTTGTGGCTGTAGAATCCGTGACCGTAATGTTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp AAGCCACCTCCTCAACCCAAGACACACCTCACTCCAGATCTACTACTAGAGAGATCAGGCTGGCATTTGTaGTTGAAGCTTGAATGGGAT +
Preference number: 4 (lower is better)
Translates to: KPPPQPKTHLTPDLLLERSGWHL*LKLEWD
Trigger: ATCCCATTCAAGCTTCAAGCACAAATGCCAGCCTGA...TCTCTCTAGTAGTAGATCTGGAGTGAGGTGTGTCTTGGGTTGAGGAGGTGGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373871.8
ENST00000436342.6
CDS-3UTR GCA 90 bp GGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCCTAAGAGTGCAACTCTaGCCCAGGAATTTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: GKCQSLSYSVSSAPQFTSLRVQL*PRNFLF
Trigger: GAAAAGGAAATTCCTGGGGCAGAGTTGCACTCTTAG...GCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GGGTGGAGAAAAAGGCAGGGTAATTACAGAGAGCACTGTGTTCCCTGGACAATTAAAGTGGGGGAAACCTaGGTCAAAGATCAGACCCTT +
Preference number: 4 (lower is better)
Translates to: GWRKRQGNYREHCVPWTIKVGET*VKDQTL
Trigger: AAGGGTCTGATCTTTGACGCAGGTTTCCCCCACTTT...AATTGTCCAGGGAACACAGTGCTCTCTGTAATTACCCTGCCTTTTTCTCCACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp AAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGGACTGGCCAGAGCTaGCTGGAGGTGGACATGAGG +
Preference number: 4 (lower is better)
Translates to: KPASKIRPLPIKITYTFAGTGQS*LEVDMR
Trigger: CCTCATGTCCACCTCCAGGCAGCTCTGGCCAGTCCC...AGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GCTCTTCAGTTTCAGGCAGAGATCTGGGTAAATACATACCTGGGACATCCTTCAGTCGAGAGATGCTCCTaGATTTGGCCCAGGATTAAG +
Preference number: 4 (lower is better)
Translates to: ALQFQAEIWVNTYLGHPSVERCS*IWPRIK
Trigger: CTTAATCCTGGGCCAAATGCAGGAGCATCTCTCGAC...TGAAGGATGTCCCAGGTATGTATTTACCCAGATCTCTGCCTGAAACTGAAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp AGATGGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACAACAATGCCTCCTTCTaGGGACCAATCCTGCATCTC +
Preference number: 4 (lower is better)
Translates to: RWEMPKFKLLSVQCPTVHNNASF*GPILHL
Trigger: GAGATGCAGGATTGGTCCGCAGAAGGAGGCATTGTT...GTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GGGTGGAGAAAAAGGCAGGGTAATTACAGAGAGCACTGTGTTCCCTGGACAATTCTTGCCTCTTTGTGCTaGAACATCTCTGGAAATGGG +
Preference number: 4 (lower is better)
Translates to: GWRKRQGNYREHCVPWTILASLC*NISGNG
Trigger: CCCATTTCCAGAGATGTTGCAGCACAAAGAGGCAAG...AATTGTCCAGGGAACACAGTGCTCTCTGTAATTACCCTGCCTTTTTCTCCACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp CCATGGATAAAGACAGAGAGAGAGAGAGAGAGAGAGGCAGAGAGGGAGGGAGAGGTGAGGTATAATCATTaGATGAGCGAGGGATGTAAT +
Preference number: 4 (lower is better)
Translates to: PWIKTEREREREAEREGEVRYNH*MSEGCN
Trigger: ATTACATCCCTCGCTCATCCAATGATTATACCTCAC...CTCTCCCTCCCTCTCTGCCTCTCTCTCTCTCTCTCTCTCTGTCTTTATCCATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCGGCTACTGCTGCTGCTaGAATATTGGCAATTGTAGA +
Preference number: 4 (lower is better)
Translates to: GKCQSLSYSVSSAPQFTSGYCCC*NIGNCR
Trigger: TCTACAATTGCCAATATTCCAGCAGCAGCAGTAGCC...GCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp AGATGGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACTCTCCGACTGGTATGTaGTTGCTGCTAATGTGGTGC +
Preference number: 4 (lower is better)
Translates to: RWEMPKFKLLSVQCPTVHSPTGM*LLLMWC
Trigger: GCACCACATTAGCAGCAACCACATACCAGTCGGAGA...GTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GACCAAGAAGGAAGAAGCTGCAGGGACGAGCATCTGATGGGAAATGGGTGCTTCCCAGTAAGAAGTGAGTaGAAGATGATGATGGTTTCA +
Preference number: 4 (lower is better)
Translates to: DQEGRSCRDEHLMGNGCFPVRSE*KMMMVS
Trigger: TGAAACCATCATCATCTTCCACTCACTTCTTACTGG...GAAGCACCCATTTCCCATCAGATGCTCGTCCCTGCAGCTTCTTCCTTCTTGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp CCTGGCATTGGAAGGAGTCTTGCCTCTTTGTGCTGCAACATCTCTGGAAATGGGGCCAATCACTACTGTTaGGTCCTTTCCATATTTCTG +
Preference number: 4 (lower is better)
Translates to: PGIGRSLASLCCNISGNGANHYC*VLSIFL
Trigger: CAGAAATATGGAAAGGACCCAACAGTAGTGATTGGC...CCCATTTCCAGAGATGTTGCAGCACAAAGAGGCAAGACTCCTTCCAATGCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp ACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGAGTGCTTCCTTCCTCTaGGGACTGAGGAGACCACCC +
Preference number: 4 (lower is better)
Translates to: TCVKDQTLTYKNNIHIRWSASFL*GLRRPP
Trigger: GGGTGGTCTCCTCAGTCCCCAGAGGAAGGAAGCACT...CCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp AAGGGACTGGAAAGAAGACTAAGGCTTCTAGATGGGAAATGCCAAAGTTTAAGTAACCTTGGCCAGGGCTaGAACCAGCTGGGTGGTAGT +
Preference number: 4 (lower is better)
Translates to: KGLERRLRLLDGKCQSLSNLGQG*NQLGGS
Trigger: ACTACCACCCAGCTGGTTCCAGCCCTGGCCAAGGTT...ACTTAAACTTTGGCATTTCCCATCTAGAAGCCTTAGTCTTCTTTCCAGTCCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GTTCTCTCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGATACTAGGTCTCCATaGTTTGTGATCCTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: VLSIQLSLLLYGDEHGAADTRSP*FVILQK
Trigger: TTTCTGGAGGATCACAAACCATGGAGACCTAGTATC...TGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp CCTGGCATTGGAAGGAGTCTTGCCTCTTTGTGCTGCAACATCTCTGGAAATGGGGATACTAGGTCTCCATaGTTTGTGATCCTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: PGIGRSLASLCCNISGNGDTRSP*FVILQK
Trigger: TTTCTGGAGGATCACAAACCATGGAGACCTAGTATC...CCCATTTCCAGAGATGTTGCAGCACAAAGAGGCAAGACTCCTTCCAATGCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GAGGACTCTAATGAAGAGGGTCTCCCCCTTGATGAATGGACCCACAGTGTCCTTTTCTCAATCTGGTCATaGACTAAGAGTGCAACTCTG +
Preference number: 4 (lower is better)
Translates to: EDSNEEGLPLDEWTHSVLFSIWS*TKSATL
Trigger: CAGAGTTGCACTCTTAGTCCATGACCAGATTGAGAA...AAGGACACTGTGGGTCCATTCATCAAGGGGGAGACCCTCTTCATTAGAGTCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GAGGAAGGGACAGATGGCCTGCTGACTGGGGCTGAGGCAGAACTAGATTTTCTCGGAAGTCAAATACATTaGCAGTTTTGGCCAAAATGT +
Preference number: 4 (lower is better)
Translates to: EEGTDGLLTGAEAELDFLGSQIH*QFWPKC
Trigger: ACATTTTGGCCAAAACTGCCAATGTATTTGACTTCC...GAGAAAATCTAGTTCTGCCTCAGCCCCAGTCAGCAGGCCATCTGTCCCTTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GGGTGGAGAAAAAGGCAGGGTAATTACAGAGAGCACTGTGTTCCCTGGACAATTGGGACATCCTTCATATaGCTTAGGGCTTCCACAAAG +
Preference number: 4 (lower is better)
Translates to: GWRKRQGNYREHCVPWTIGTSFI*LRASTK
Trigger: CTTTGTGGAAGCCCTAAGCCATATGAAGGATGTCCC...AATTGTCCAGGGAACACAGTGCTCTCTGTAATTACCCTGCCTTTTTCTCCACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GAGGACTCTAATGAAGAGGGTCTCCCCCTTGATGAATGGACCCACAGTGTCCTTACAAGCAATTATAGCTaGGGTTGGTCAACAATGCCT +
Preference number: 4 (lower is better)
Translates to: EDSNEEGLPLDEWTHSVLTSNYS*GWSTMP
Trigger: AGGCATTGTTGACCAACCCCAGCTATAATTGCTTGT...AAGGACACTGTGGGTCCATTCATCAAGGGGGAGACCCTCTTCATTAGAGTCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp CCTGGCATTGGAAGGAGTCTTGCCTCTTTGTGCTGCAACATCTCTGGAAATGGGCAACATCTCTGGAAATaGGTATGCAGAATCTCTGGT +
Preference number: 4 (lower is better)
Translates to: PGIGRSLASLCCNISGNGQHLWK*VCRISG
Trigger: ACCAGAGATTCTGCATACCCATTTCCAGAGATGTTG...CCCATTTCCAGAGATGTTGCAGCACAAAGAGGCAAGACTCCTTCCAATGCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp ATTAAAAGCACTGTAGCTGCAGTGAGTCCATTGTTCTCTCTATCCAACTGTCCCGCAGCACAACAGCCGTaGCCTTTGTCCAGGACAAAA +
Preference number: 4 (lower is better)
Translates to: IKSTVAAVSPLFSLSNCPAAQQP*PLSRTK
Trigger: TTTTGTCCTGGACAAAGGCCACGGCTGTTGTGCTGC...GGGACAGTTGGATAGAGAGAACAATGGACTCACTGCAGCTACAGTGCTTTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GAAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCGTGTGCTTGCGTGCATaGTGGGGGTACCACTCCGCA +
Preference number: 4 (lower is better)
Translates to: ETCVKDQTLTYKNNIHIRVCLRA*WGYHSA
Trigger: TGCGGAGTGGTACCCCCACCATGCACGCAAGCACAC...GCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp CATGAGGACTCTAATGAAGAGGGTCTCCCCCTTGATGAATGGACCCACAGTGTCGAGCACTGTGTTCCCTaGACAATTCATTTTGGCAAA +
Preference number: 4 (lower is better)
Translates to: HEDSNEEGLPLDEWTHSVEHCVP*TIHFGK
Trigger: TTTGCCAAAATGAATTGTCCAGGGAACACAGTGCTC...GACACTGTGGGTCCATTCATCAAGGGGGAGACCCTCTTCATTAGAGTCCTCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp CCTGGCATTGGAAGGAGTCTTGCCTCTTTGTGCTGCAACATCTCTGGAAATGGGAAACAAAAGCCCAGATaGGCATCTAAATCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: PGIGRSLASLCCNISGNGKQKPR*ASKSGA
Trigger: TGCTCCAGATTTAGATGCCCATCTGGGCTTTTGTTT...CCCATTTCCAGAGATGTTGCAGCACAAAGAGGCAAGACTCCTTCCAATGCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp AGATGGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACACTGCGAACAAGCTGTaGCATCAGTCTCTTGGGACA +
Preference number: 4 (lower is better)
Translates to: RWEMPKFKLLSVQCPTVHTANKL*HQSLGT
Trigger: TGTCCCAAGAGACTGATGCCACAGCTTGTTCGCAGT...GTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp CTCTCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGCTCTTGCTCTTCTTCCATaGGGACCAATATTTCTTTAT +
Preference number: 4 (lower is better)
Translates to: LSIQLSLLLYGDEHGAAALALLP*GPIFLY
Trigger: ATAAAGAAATATTGGTCCTCATGGAAGAAGAGCAAG...AGCTGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp GACCAAGAAGGAAGAAGCTGCAGGGACGAGCATCTGATGGGAAATGGGTGCTTCCTTGCTCTTCTTCCATaGGGACCAATATTTCTTTAT +
Preference number: 4 (lower is better)
Translates to: DQEGRSCRDEHLMGNGCFLALLP*GPIFLY
Trigger: ATAAAGAAATATTGGTCCTCATGGAAGAAGAGCAAG...GAAGCACCCATTTCCCATCAGATGCTCGTCCCTGCAGCTTCTTCCTTCTTGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp GGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCTTCCGAAACAGGAACTaGGAGAATATGTGCATAAGG +
Preference number: 4 (lower is better)
Translates to: GKCQSLSYSVSSAPQFTSFRNRN*ENMCIR
Trigger: CCTTATGCACATATTCTCTCAGTTCCTGTTTCGGAA...GCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp AGATGGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACTACCTCCTGAGCCACTaGAACCATCTGTTGAGAAAC +
Preference number: 4 (lower is better)
Translates to: RWEMPKFKLLSVQCPTVHYLLSH*NHLLRN
Trigger: GTTTCTCAACAGATGGTTTCAGTGGCTCAGGAGGTA...GTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp CCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGACTGAACACCCACAGATaGACCATGGCTGCCACTACC +
Preference number: 4 (lower is better)
Translates to: PASKIRPLPIKITYTFAGLNTHR*TMAATT
Trigger: GGTAGTGGCAGCCATGGTTCATCTGTGGGTGTTCAG...TCCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp AAAGGGACTGGAAAGAAGACTAAGGCTTCTAGATGGGAAATGCCAAAGTTTAAGCTGAACACCCACAGATaGACCATGGCTGCCACTACC +
Preference number: 4 (lower is better)
Translates to: KGTGKKTKASRWEMPKFKLNTHR*TMAATT
Trigger: GGTAGTGGCAGCCATGGTTCATCTGTGGGTGTTCAG...CTTAAACTTTGGCATTTCCCATCTAGAAGCCTTAGTCTTCTTTCCAGTCCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp GGGTGGAGAAAAAGGCAGGGTAATTACAGAGAGCACTGTGTTCCCTGGACAATTGCTGGCATTTGTGCTTaGAGCTTGAATGGGATAAGA +
Preference number: 4 (lower is better)
Translates to: GWRKRQGNYREHCVPWTIAGICA*SLNGIR
Trigger: TCTTATCCCATTCAAGCTTCAAGCACAAATGCCAGC...AATTGTCCAGGGAACACAGTGCTCTCTGTAATTACCCTGCCTTTTTCTCCACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373871.8
ENST00000436342.6
CDS-3UTR TCA 90 bp TATAACATTACGGTCACGGATTCTACAGCCACAAATGCCCGCAGTCACATAAATAGCTCCCTTCAGGAGTaGAAAGGAGCTCAAGGGGAA +
Preference number: 4 (lower is better)
Translates to: YNITVTDSTATNARSHINSSLQE*KGAQGE
Trigger: TTCCCCTTGAGCTCCTTTTCACTCCTGAAGGGAGCT...ATTTATGTGACTGCGGGCATTTGTGGCTGTAGAATCCGTGACCGTAATGTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp AAGGGACTGGAAAGAAGACTAAGGCTTCTAGATGGGAAATGCCAAAGTTTAAGTGCTTCTGTATGGAGATaGACACGGGGCTGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: KGLERRLRLLDGKCQSLSASVWR*TRGCSS
Trigger: TGAGCTGCAGCCCCGTGTTCATCTCCATACAGAAGC...ACTTAAACTTTGGCATTTCCCATCTAGAAGCCTTAGTCTTCTTTCCAGTCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp AGATGGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACGCCTTGGCAACAATGTaGAAACCTGTCTGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: RWEMPKFKLLSVQCPTVHALATM*KPVCFS
Trigger: GGAGAAACAGACAGGTTTTCACATTGTTGCCAAGGC...GTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp GGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCGAATTTTATCCTGCCTaGGTAGATGCCCAAATTGCT +
Preference number: 4 (lower is better)
Translates to: GKCQSLSYSVSSAPQFTSEFYPA*VDAQIA
Trigger: AGCAATTTGGGCATCTACTCAGGCAGGATAAAATTC...GCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp GTTCTCTCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAATGAGCGCTTTTCAATaGGTTCTGAAGGAATGTGTA +
Preference number: 4 (lower is better)
Translates to: VLSIQLSLLLYGDEHGAAMSAFQ*VLKECV
Trigger: TACACATTCCTTCAGAACTCATTGAAAAGCGCTCAT...TGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp TATAACATTACGGTCACGGATTCTACAGCCACAAATGCCCGCAGTCACATAAATGGTGAGCAGATCACCTaGGGTCAGGAGTTTGAGAAC +
Preference number: 4 (lower is better)
Translates to: YNITVTDSTATNARSHINGEQIT*GQEFEN
Trigger: GTTCTCAAACTCCTGACCTCAGGTGATCTGCTCACC...ATTTATGTGACTGCGGGCATTTGTGGCTGTAGAATCCGTGACCGTAATGTTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp GGGAAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCCTTGCCAGAGCTGTCTaGCTCAGAGGAGAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: GKPASKIRPLPIKITYTFLARAV*LRGEEG
Trigger: CCCTTCCTCTCCTCTGAGTCAGACAGCTCTGGCAAG...GAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp TCTACAGCCACAAATGCCCGCAGTCACATAAATATATCCAATCCAATCAATGCCGCTAACAGAGGCATCTaGAGTTCAGAGGGAGAGTCG +
Preference number: 4 (lower is better)
Translates to: STATNARSHINISNPINAANRGI*SSEGES
Trigger: CGACTCTCCCTCTGAACTTCAGATGCCTCTGTTAGC...GGCATTGATTGGATTGGATATATTTATGTGACTGCGGGCATTTGTGGCTGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCTAGATGCTGGCTACTGCTaGTGCTGGAATATTGGCAAT +
Preference number: 4 (lower is better)
Translates to: EMPKFKLLSVQCPTVHQLDAGYC*CWNIGN
Trigger: ATTGCCAATATTCCAGCAGCAGCAGTAGCCAGCATC...TAGCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GCTCTTCAGTTTCAGGCAGAGATCTGGGTAAATACATACCTGGGACATCCTTCAGATGCTGGCTACTGCTaGTGCTGGAATATTGGCAAT +
Preference number: 4 (lower is better)
Translates to: ALQFQAEIWVNTYLGHPSDAGYC*CWNIGN
Trigger: ATTGCCAATATTCCAGCAGCAGCAGTAGCCAGCATC...TGAAGGATGTCCCAGGTATGTATTTACCCAGATCTCTGCCTGAAACTGAAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp CCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGAAGAGGAAAGTCTCTGTaGTGCAGGTGCAGGCGCCAT +
Preference number: 4 (lower is better)
Translates to: PASKIRPLPIKITYTFAGRGKSL*CRCRRH
Trigger: ATGGCGCCTGCACCTGCAGCACAGAGACTTTCCTCT...TCCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp AAAGGGACTGGAAAGAAGACTAAGGCTTCTAGATGGGAAATGCCAAAGTTTAAGCAGATGAACCATGGCTaGCACTACCTCCTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: KGTGKKTKASRWEMPKFKQMNHG*HYLLSH
Trigger: GTGGCTCAGGAGGTAGTGGCAGCCATGGTTCATCTG...CTTAAACTTTGGCATTTCCCATCTAGAAGCCTTAGTCTTCTTTCCAGTCCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GAGGAAGGGACAGATGGCCTGCTGACTGGGGCTGAGGCAGAACTAGATTTTCTCATCATAAAAGTCTGCTaGATTTATCTGATCACCACA +
Preference number: 4 (lower is better)
Translates to: EEGTDGLLTGAEAELDFLIIKVC*IYLITT
Trigger: TGTGGTGATCAGATAAATGCAGCAGACTTTTATGAT...GAGAAAATCTAGTTCTGCCTCAGCCCCAGTCAGCAGGCCATCTGTCCCTTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp ATTAAAAGCACTGTAGCTGCAGTGAGTCCATTGTTCTCTCTATCCAACTGTCCCGTCGAGAGATGCTCCTaGATTTGGCCCAGGATTAAG +
Preference number: 4 (lower is better)
Translates to: IKSTVAAVSPLFSLSNCPVERCS*IWPRIK
Trigger: CTTAATCCTGGGCCAAATGCAGGAGCATCTCTCGAC...GGGACAGTTGGATAGAGAGAACAATGGACTCACTGCAGCTACAGTGCTTTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GAAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCCCAGAGGTCGAGAGATaGTCCTGCATTTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: ETCVKDQTLTYKNNIHIRPEVER*SCIWPR
Trigger: CCTGGGCCAAATGCAGGAGCATCTCTCGACCTCTGG...GCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp TATAACATTACGGTCACGGATTCTACAGCCACAAATGCCCGCAGTCACATAAATGGGGTTGGTCAACAATaGCTCCTTCTGCGGACCAAT +
Preference number: 4 (lower is better)
Translates to: YNITVTDSTATNARSHINGVGQQ*LLLRTN
Trigger: ATTGGTCCGCAGAAGGAGGCATTGTTGACCAACCCC...ATTTATGTGACTGCGGGCATTTGTGGCTGTAGAATCCGTGACCGTAATGTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp AAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTCTGGGAGGCGGAGGTTaGAGTGAGCCGAGATCATGC +
Preference number: 4 (lower is better)
Translates to: KPASKIRPLPIKITYTFALGGGG*SEPRSC
Trigger: GCATGATCTCGGCTCACTGCAACCTCCGCCTCCCAG...AGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GAAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCCTCCAAAGCTGGAGCTaGGGTAGCAGGCCTGGTACT +
Preference number: 4 (lower is better)
Translates to: ETCVKDQTLTYKNNIHIRLQSWS*GSRPGT
Trigger: AGTACCAGGCCTGCTACCCCAGCTCCAGCTTTGGAG...GCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp AGATGGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACTGGTTGCTGCTAATGTaGTGCTCTCTGCATCACTGT +
Preference number: 4 (lower is better)
Translates to: RWEMPKFKLLSVQCPTVHWLLLM*CSLHHC
Trigger: ACAGTGATGCAGAGAGCACCACATTAGCAGCAACCA...GTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCTACTAGGCTTCTCCGACTaGTATGTGGTTGCTGCTAAT +
Preference number: 4 (lower is better)
Translates to: EMPKFKLLSVQCPTVHQLLGFSD*YVVAAN
Trigger: ATTAGCAGCAACCACATACCAGTCGGAGAAGCCTAG...TAGCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCTCTAATTCACTGTCTTaGGAAGAAGTGGCATCAGCT +
Preference number: 4 (lower is better)
Translates to: GKCQSLSYSVSSAPQFTSSNSLS*EEVASA
Trigger: AGCTGATGCCACTTCTTCCCAAGACAGTGAATTAGA...GCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp AAGCCACCTCCTCAACCCAAGACACACCTCACTCCAGATCTACTACTAGAGAGAGCCAATCACTACTGTTaGGTCCTTTCCATATTTCTG +
Preference number: 4 (lower is better)
Translates to: KPPPQPKTHLTPDLLLERANHYC*VLSIFL
Trigger: CAGAAATATGGAAAGGACCCAACAGTAGTGATTGGC...TCTCTCTAGTAGTAGATCTGGAGTGAGGTGTGTCTTGGGTTGAGGAGGTGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp CTCTCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGCTCAATTCTTTCTGGACTaGATGAGAAGTAAGGACTTT +
Preference number: 4 (lower is better)
Translates to: LSIQLSLLLYGDEHGAAAQFFLD*MRSKDF
Trigger: AAAGTCCTTACTTCTCATCCAGTCCAGAAAGAATTG...AGCTGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp CCAGAGGTCGAGAGATGCTCCTGCATTTGGCCCAGGATTAAGTTTTGGGCCATGCAATTCTTTCTGGACTaGATGAGAAGTAAGGACTTT +
Preference number: 4 (lower is better)
Translates to: PEVERCSCIWPRIKFWAMQFFLD*MRSKDF
Trigger: AAAGTCCTTACTTCTCATCCAGTCCAGAAAGAATTG...CATGGCCCAAAACTTAATCCTGGGCCAAATGCAGGAGCATCTCTCGACCTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GAAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCAACCTTGGCCAGGGCTaGAACCAGCTGGGTGGTAGT +
Preference number: 4 (lower is better)
Translates to: ETCVKDQTLTYKNNIHIRNLGQG*NQLGGS
Trigger: ACTACCACCCAGCTGGTTCCAGCCCTGGCCAAGGTT...GCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp AAGCCACCTCCTCAACCCAAGACACACCTCACTCCAGATCTACTACTAGAGAGATTCTCAATCTGGTCATaGACTAAGAGTGCAACTCTG +
Preference number: 4 (lower is better)
Translates to: KPPPQPKTHLTPDLLLERFSIWS*TKSATL
Trigger: CAGAGTTGCACTCTTAGTCCATGACCAGATTGAGAA...TCTCTCTAGTAGTAGATCTGGAGTGAGGTGTGTCTTGGGTTGAGGAGGTGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp TCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGCTCACGGAAGTCAAATACATTaGCAGTTTTGGCCAAAATGT +
Preference number: 4 (lower is better)
Translates to: SIQLSLLLYGDEHGAAAHGSQIH*QFWPKC
Trigger: ACATTTTGGCCAAAACTGCCAATGTATTTGACTTCC...GTGAGCTGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GGGTGGAGAAAAAGGCAGGGTAATTACAGAGAGCACTGTGTTCCCTGGACAATTGTTCAAGACCAGCCTTaGCAACAATGTGAAAACCTG +
Preference number: 4 (lower is better)
Translates to: GWRKRQGNYREHCVPWTIVQDQP*QQCENL
Trigger: CAGGTTTTCACATTGTTGCCAAGGCTGGTCTTGAAC...AATTGTCCAGGGAACACAGTGCTCTCTGTAATTACCCTGCCTTTTTCTCCACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp ACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGGGCATCCAACAATCATaGCTGGGCTGGAAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: TCVKDQTLTYKNNIHIRWGIQQS*LGWKAV
Trigger: CACAGCCTTCCAGCCCAGCCATGATTGTTGGATGCC...CCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp ATTAAAAGCACTGTAGCTGCAGTGAGTCCATTGTTCTCTCTATCCAACTGTCCCTTGCTCTTGGAGGGATaGGGCATCCAACAATCATGG +
Preference number: 4 (lower is better)
Translates to: IKSTVAAVSPLFSLSNCPLLLEG*GIQQSW
Trigger: CCATGATTGTTGGATGCCCCATCCCTCCAAGAGCAA...GGGACAGTTGGATAGAGAGAACAATGGACTCACTGCAGCTACAGTGCTTTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp ATTAAAAGCACTGTAGCTGCAGTGAGTCCATTGTTCTCTCTATCCAACTGTCCCACCCACAGTGTCCTTTaGTCCTCAGCTTCTAACAGC +
Preference number: 4 (lower is better)
Translates to: IKSTVAAVSPLFSLSNCPTHSVL*SSASNS
Trigger: GCTGTTAGAAGCTGAGGACCAAAGGACACTGTGGGT...GGGACAGTTGGATAGAGAGAACAATGGACTCACTGCAGCTACAGTGCTTTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp TATAACATTACGGTCACGGATTCTACAGCCACAAATGCCCGCAGTCACATAAATAGGTGTCCATTCTTCTaGACACTACCAGCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: YNITVTDSTATNARSHINRCPFF*TLPAAP
Trigger: TGGGGCAGCTGGTAGTGTCCAGAAGAATGGACACCT...ATTTATGTGACTGCGGGCATTTGTGGCTGTAGAATCCGTGACCGTAATGTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp TCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGCTCACGGGAGTTCTAACTTCTaGATGAAAAAGGAAACCAAT +
Preference number: 4 (lower is better)
Translates to: SIQLSLLLYGDEHGAAAHGSSNF*MKKETN
Trigger: ATTGGTTTCCTTTTTCATCCAGAAGTTAGAACTCCC...GTGAGCTGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp CCTGGCATTGGAAGGAGTCTTGCCTCTTTGTGCTGCAACATCTCTGGAAATGGGCTTGCTCTTCTTCCATaGGGACCAATATTTCTTTAT +
Preference number: 4 (lower is better)
Translates to: PGIGRSLASLCCNISGNGLALLP*GPIFLY
Trigger: ATAAAGAAATATTGGTCCTCATGGAAGAAGAGCAAG...CCCATTTCCAGAGATGTTGCAGCACAAAGAGGCAAGACTCCTTCCAATGCCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp GGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCTCTGGATTGCTTACTTaGCTTATAGTTTGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: GKCQSLSYSVSSAPQFTSSGLLT*LIVCSP
Trigger: AGGAGAGCAAACTATAAGTCAAGTAAGCAATCCAGA...GCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373871.8
ENST00000540618.5
CDS-3UTR TCA 90 bp GGGTGGAGAAAAAGGCAGGGTAATTACAGAGAGCACTGTGTTCCCTGGACAATTTTCCGAAACAGGAACTaGGAGAATATGTGCATAAGG +
Preference number: 4 (lower is better)
Translates to: GWRKRQGNYREHCVPWTIFRNRN*ENMCIR
Trigger: CCTTATGCACATATTCTCTCAGTTCCTGTTTCGGAA...AATTGTCCAGGGAACACAGTGCTCTCTGTAATTACCCTGCCTTTTTCTCCACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp TTACATTCTAAAATAAAGAGCTCCCAAAAGGGTGGAGAGGGAAGTATCTGTGTGGGGATAATCCTGGTTTaGGATGCTGGCTACTGCTGC +
Preference number: 4 (lower is better)
Translates to: LHSKIKSSQKGGEGSICVGIILV*DAGYCC
Trigger: GCAGCAGTAGCCAGCATCTCAAACCAGGATTATCCC...CACACAGATACTTCCCTCTCCACCCTTTTGGGAGCTCTTTATTTTAGAATGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp CCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGAGGGATAATCCTGGTTTaGGATGCTGGCTACTGCTGC +
Preference number: 4 (lower is better)
Translates to: PASKIRPLPIKITYTFAGGIILV*DAGYCC
Trigger: GCAGCAGTAGCCAGCATCTCAAACCAGGATTATCCC...TCCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp TCTACAGCCACAAATGCCCGCAGTCACATAAATATATCCAATCCAATCAATGCCGCATCACTGTTAGTCTaGCCTGTGACTCCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: STATNARSHINISNPINAASLLV*PVTPKL
Trigger: CAGCTTTGGAGTCACAGGTCAGACTAACAGTGATGC...GGCATTGATTGGATTGGATATATTTATGTGACTGCGGGCATTTGTGGCTGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp GGGAAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTTCTGTATGGAGATaGACACGGGGCTGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: GKPASKIRPLPIKITYTFASVWR*TRGCSS
Trigger: TGAGCTGCAGCCCCGTGTTCATCTCCATACAGAAGC...GAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp AAAGGGACTGGAAAGAAGACTAAGGCTTCTAGATGGGAAATGCCAAAGTTTAAGCATAGGGGGAGGGTTTaGGGCCTCAGAGTAAAACCT +
Preference number: 4 (lower is better)
Translates to: KGTGKKTKASRWEMPKFKHRGRV*GLRVKP
Trigger: AGGTTTTACTCTGAGGCCTCAAACCCTCCCCCTATG...CTTAAACTTTGGCATTTCCCATCTAGAAGCCTTAGTCTTCTTTCCAGTCCCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp TTACATTCTAAAATAAAGAGCTCCCAAAAGGGTGGAGAGGGAAGTATCTGTGTGGGCAACAACCAGGAATaGGCAAAGACTGCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: LHSKIKSSQKGGEGSICVGNNQE*AKTALL
Trigger: GAGCAGAGCAGTCTTTGCTCATTCCTGGTTGTTGCC...CACACAGATACTTCCCTCTCCACCCTTTTGGGAGCTCTTTATTTTAGAATGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp AAGGGACTGGAAAGAAGACTAAGGCTTCTAGATGGGAAATGCCAAAGTTTAAGTGGCAACAACCAGGAATaGGCAAAGACTGCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: KGLERRLRLLDGKCQSLSGNNQE*AKTALL
Trigger: GAGCAGAGCAGTCTTTGCTCATTCCTGGTTGTTGCC...ACTTAAACTTTGGCATTTCCCATCTAGAAGCCTTAGTCTTCTTTCCAGTCCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp AAAGGGACTGGAAAGAAGACTAAGGCTTCTAGATGGGAAATGCCAAAGTTTAAGGGTGAGCAGATCACCTaGGGTCAGGAGTTTGAGAAC +
Preference number: 4 (lower is better)
Translates to: KGTGKKTKASRWEMPKFKGEQIT*GQEFEN
Trigger: GTTCTCAAACTCCTGACCTCAGGTGATCTGCTCACC...CTTAAACTTTGGCATTTCCCATCTAGAAGCCTTAGTCTTCTTTCCAGTCCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp TATAACATTACGGTCACGGATTCTACAGCCACAAATGCCCGCAGTCACATAAATAATCCTGGTTTGAGATaGTGGCTACTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: YNITVTDSTATNARSHINNPGLR*WLLLLL
Trigger: CAGCAGCAGCAGTAGCCAGCATCTCAAACCAGGATT...ATTTATGTGACTGCGGGCATTTGTGGCTGTAGAATCCGTGACCGTAATGTTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GGGTGGAGAAAAAGGCAGGGTAATTACAGAGAGCACTGTGTTCCCTGGACAATTGGAGACCACCCACGTTaGTTTTATGCTTATCATAGA +
Preference number: 4 (lower is better)
Translates to: GWRKRQGNYREHCVPWTIGDHPR*FYAYHR
Trigger: TCTATGATAAGCATAAAAGCAACGTGGGTGGTCTCC...AATTGTCCAGGGAACACAGTGCTCTCTGTAATTACCCTGCCTTTTTCTCCACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp TCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGCTCACATCATAAAAGTCTGCTaGATTTATCTGATCACCACA +
Preference number: 4 (lower is better)
Translates to: SIQLSLLLYGDEHGAAAHIIKVC*IYLITT
Trigger: TGTGGTGATCAGATAAATGCAGCAGACTTTTATGAT...GTGAGCTGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp CTCTCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGCTGTTATCATAAAAGTCTaGTGCATTTATCTGATCACC +
Preference number: 4 (lower is better)
Translates to: LSIQLSLLLYGDEHGAAAVIIKV*CIYLIT
Trigger: GGTGATCAGATAAATGCAGCAGACTTTTATGATAAC...AGCTGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp CCTGGCATTGGAAGGAGTCTTGCCTCTTTGTGCTGCAACATCTCTGGAAATGGGGAGTTTTTAGGGTTGTaGCATTTGACTAAAGGGAAA +
Preference number: 4 (lower is better)
Translates to: PGIGRSLASLCCNISGNGEFLGL*HLTKGK
Trigger: TTTCCCTTTAGTCAAATGGCACAACCCTAAAAACTC...CCCATTTCCAGAGATGTTGCAGCACAAAGAGGCAAGACTCCTTCCAATGCCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GAGGACTCTAATGAAGAGGGTCTCCCCCTTGATGAATGGACCCACAGTGTCCTTGAGTTTTTAGGGTTGTaGCATTTGACTAAAGGGAAA +
Preference number: 4 (lower is better)
Translates to: EDSNEEGLPLDEWTHSVLEFLGL*HLTKGK
Trigger: TTTCCCTTTAGTCAAATGGCACAACCCTAAAAACTC...AAGGACACTGTGGGTCCATTCATCAAGGGGGAGACCCTCTTCATTAGAGTCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp AAAGGGACTGGAAAGAAGACTAAGGCTTCTAGATGGGAAATGCCAAAGTTTAAGGAGCAAAGACTGCTCTaGTCAGCCTCCTTACCTCTC +
Preference number: 4 (lower is better)
Translates to: KGTGKKTKASRWEMPKFKEQRLL*SASLPL
Trigger: GAGAGGTAAGGAGGCTGAGCAGAGCAGTCTTTGCTC...CTTAAACTTTGGCATTTCCCATCTAGAAGCCTTAGTCTTCTTTCCAGTCCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCGTGAGGTATAATCATTaGATGAGCGAGGGATGTAAT +
Preference number: 4 (lower is better)
Translates to: GKCQSLSYSVSSAPQFTSVRYNH*MSEGCN
Trigger: ATTACATCCCTCGCTCATCCAATGATTATACCTCAC...GCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp ATTAAAAGCACTGTAGCTGCAGTGAGTCCATTGTTCTCTCTATCCAACTGTCCCTGGTTGCTGCTAATGTaGTGCTCTCTGCATCACTGT +
Preference number: 4 (lower is better)
Translates to: IKSTVAAVSPLFSLSNCPWLLLM*CSLHHC
Trigger: ACAGTGATGCAGAGAGCACCACATTAGCAGCAACCA...GGGACAGTTGGATAGAGAGAACAATGGACTCACTGCAGCTACAGTGCTTTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp ATTAAAAGCACTGTAGCTGCAGTGAGTCCATTGTTCTCTCTATCCAACTGTCCCAGTCTGGGACAAAGATaGACTTGTAGAAGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: IKSTVAAVSPLFSLSNCPSLGQR*TCRRVS
Trigger: GGAGACCCTTCTACAAGTCCATCTTTGTCCCAGACT...GGGACAGTTGGATAGAGAGAACAATGGACTCACTGCAGCTACAGTGCTTTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp AGATGGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACATAAGAATAATGTGCTaGGCTTGGCTGGCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: RWEMPKFKLLSVQCPTVHIRIMC*AWLACG
Trigger: ACCACAAGCCAGCCAAGCCCAGCACATTATTCTTAT...GTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373871.8
ENST00000436342.6
CDS-3UTR CCA 90 bp ATTAAAAGCACTGTAGCTGCAGTGAGTCCATTGTTCTCTCTATCCAACTGTCCCCTCGCCAGCATTCCATaGATAAAGACAGAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: IKSTVAAVSPLFSLSNCPLASIP*IKTERE
Trigger: CTCTCTCTCTGTCTTTATCCATGGAATGCTGGCGAG...GGGACAGTTGGATAGAGAGAACAATGGACTCACTGCAGCTACAGTGCTTTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp AGATGGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACGCTAGAAAAAGAAAGTaGGGGAAACCTGCGTCAAAG +
Preference number: 4 (lower is better)
Translates to: RWEMPKFKLLSVQCPTVHARKRK*GKPASK
Trigger: CTTTGACGCAGGTTTCCCCCACTTTCTTTTTCTAGC...GTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCCATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GTTCTCTCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCATCAGCAAAGTCTTTCTaGTTTCCTACTTTAGAATGG +
Preference number: 4 (lower is better)
Translates to: VLSIQLSLLLYGDEHGAASAKSF*FPTLEW
Trigger: CCATTCTAAAGTAGGAAACCAGAAAGACTTTGCTGA...TGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GGGAAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCCAATCATGGCTGGGCTaGAAGGCTGTGACTAGTGCC +
Preference number: 4 (lower is better)
Translates to: GKPASKIRPLPIKITYTFQSWLG*KAVTSA
Trigger: GGCACTAGTCACAGCCTTCCAGCCCAGCCATGATTG...GAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp TATAACATTACGGTCACGGATTCTACAGCCACAAATGCCCGCAGTCACATAAATTTGCTCTTGGAGGGATaGGGCATCCAACAATCATGG +
Preference number: 4 (lower is better)
Translates to: YNITVTDSTATNARSHINLLLEG*GIQQSW
Trigger: CCATGATTGTTGGATGCCCCATCCCTCCAAGAGCAA...ATTTATGTGACTGCGGGCATTTGTGGCTGTAGAATCCGTGACCGTAATGTTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp CCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGATGCCCAAATTGCTCTTaGAGGGATGGGGCATCCAAC +
Preference number: 4 (lower is better)
Translates to: PASKIRPLPIKITYTFAGCPNCS*RDGASN
Trigger: GTTGGATGCCCCATCCCTCCAAGAGCAATTTGGGCA...TCCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp AAGGGACTGGAAAGAAGACTAAGGCTTCTAGATGGGAAATGCCAAAGTTTAAGTTGCCCAAATTGCTCTTaGAGGGATGGGGCATCCAAC +
Preference number: 4 (lower is better)
Translates to: KGLERRLRLLDGKCQSLSCPNCS*RDGASN
Trigger: GTTGGATGCCCCATCCCTCCAAGAGCAATTTGGGCA...ACTTAAACTTTGGCATTTCCCATCTAGAAGCCTTAGTCTTCTTTCCAGTCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp AAAGGGACTGGAAAGAAGACTAAGGCTTCTAGATGGGAAATGCCAAAGTTTAAGCTCTTGCTATCTGGGTaGCCTGGCATTGGAAGGAGT +
Preference number: 4 (lower is better)
Translates to: KGTGKKTKASRWEMPKFKLLLSG*PGIGRS
Trigger: ACTCCTTCCAATGCCAGGCCACCCAGATAGCAAGAG...CTTAAACTTTGGCATTTCCCATCTAGAAGCCTTAGTCTTCTTTCCAGTCCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GGGTGGAGAAAAAGGCAGGGTAATTACAGAGAGCACTGTGTTCCCTGGACAATTCTGGACAATTCATTTTaGCAAACAGCCAAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: GWRKRQGNYREHCVPWTILDNSF*QTAKKL
Trigger: GAGCTTCTTGGCTGTTTGCCAAAATGAATTGTCCAG...AATTGTCCAGGGAACACAGTGCTCTCTGTAATTACCCTGCCTTTTTCTCCACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp AGATGGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACTCCAGATTTTTGTGTTaGGGTGGAGAAAAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: RWEMPKFKLLSVQCPTVHSRFLC*GGEKGR
Trigger: CCTGCCTTTTTCTCCACCCCAACACAAAAATCTGGA...GTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCCATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp TCTACAGCCACAAATGCCCGCAGTCACATAAATATATCCAATCCAATCAATGCCACCCACAGTGTCCTTTaGTCCTCAGCTTCTAACAGC +
Preference number: 4 (lower is better)
Translates to: STATNARSHINISNPINATHSVL*SSASNS
Trigger: GCTGTTAGAAGCTGAGGACCAAAGGACACTGTGGGT...GGCATTGATTGGATTGGATATATTTATGTGACTGCGGGCATTTGTGGCTGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp TTACATTCTAAAATAAAGAGCTCCCAAAAGGGTGGAGAGGGAAGTATCTGTGTGAGGTGTCCATTCTTCTaGACACTACCAGCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: LHSKIKSSQKGGEGSICVRCPFF*TLPAAP
Trigger: TGGGGCAGCTGGTAGTGTCCAGAAGAATGGACACCT...CACACAGATACTTCCCTCTCCACCCTTTTGGGAGCTCTTTATTTTAGAATGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GTTCTCTCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCATATAGTGTGAATATCTaGGGAGTTCTAACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: VLSIQLSLLLYGDEHGAAYSVNI*GVLTSG
Trigger: TCCAGAAGTTAGAACTCCCCAGATATTCACACTATA...TGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCCTGATCACTGACATCTaGATTGCTTACTTGATGGTT +
Preference number: 4 (lower is better)
Translates to: GKCQSLSYSVSSAPQFTSLITDI*IAYLMV
Trigger: AACCATCAAGTAAGCAATCCAGATGTCAGTGATCAG...GCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373864.5
3UTR CAA 72 bp TTGTGTAAACTGCGAACAAGCTGTGGCATCAGTCTCTaGGGACAACTCACTAGCTTTACAGAAGACAGGAAC +
Preference number: 4 (lower is better)
Translates to: LCKLRTSCGISL*GQLTSFTEDRN
Trigger: GTTCCTGTCTTCTGTAAAGCTAGTGAGTTGTCCCAAGAGACTGATGCCACAGCTTGTTCGCAGTTTACACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp AAGGGACTGGAAAGAAGACTAAGGCTTCTAGATGGGAAATGCCAAAGTTTAAGTGGTCTCCATGGTTTGTaGTCCTCCAGAAAGGCATGT +
Preference number: 4 (lower is better)
Translates to: KGLERRLRLLDGKCQSLSGLHGL*SSRKAC
Trigger: ACATGCCTTTCTGGAGGATCACAAACCATGGAGACC...ACTTAAACTTTGGCATTTCCCATCTAGAAGCCTTAGTCTTCTTTCCAGTCCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp CCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGAGGTCTCCATGGTTTGTaGTCCTCCAGAAAGGCATGT +
Preference number: 4 (lower is better)
Translates to: PASKIRPLPIKITYTFAGGLHGL*SSRKAC
Trigger: ACATGCCTTTCTGGAGGATCACAAACCATGGAGACC...TCCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp CCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGAAGCTCTAAAGCCTGGTaGAGGGATACTAGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: PASKIRPLPIKITYTFAGSSKAW*RDTRSP
Trigger: TGGAGACCTAGTATCCCTTCACCAGGCTTTAGAGCT...TCCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp ATTAAAAGCACTGTAGCTGCAGTGAGTCCATTGTTCTCTCTATCCAACTGTCCCATGCAGAATCTCTGGTaGCAAGCAATTATAGCTGGG +
Preference number: 4 (lower is better)
Translates to: IKSTVAAVSPLFSLSNCPMQNLW*QAIIAG
Trigger: CCCAGCTATAATTGCTTGTCACCAGAGATTCTGCAT...GGGACAGTTGGATAGAGAGAACAATGGACTCACTGCAGCTACAGTGCTTTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp GGGTGGAGAAAAAGGCAGGGTAATTACAGAGAGCACTGTGTTCCCTGGACAATTATGAGCGCTTTTCAATaGGTTCTGAAGGAATGTGTA +
Preference number: 4 (lower is better)
Translates to: GWRKRQGNYREHCVPWTIMSAFQ*VLKECV
Trigger: TACACATTCCTTCAGAACTCATTGAAAAGCGCTCAT...AATTGTCCAGGGAACACAGTGCTCTCTGTAATTACCCTGCCTTTTTCTCCACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp ATTAAAAGCACTGTAGCTGCAGTGAGTCCATTGTTCTCTCTATCCAACTGTCCCTCTCTTCCATTTAAATaGGGGTGGCAACAACCAGGA +
Preference number: 4 (lower is better)
Translates to: IKSTVAAVSPLFSLSNCPSLPFK*GWQQPG
Trigger: TCCTGGTTGTTGCCACCCTCATTTAAATGGAAGAGA...GGGACAGTTGGATAGAGAGAACAATGGACTCACTGCAGCTACAGTGCTTTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp CCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGACTGAGGTCAGGAGTTTaGGAACAGCCTGGTCAACAT +
Preference number: 4 (lower is better)
Translates to: PASKIRPLPIKITYTFAGLRSGV*EQPGQH
Trigger: ATGTTGACCAGGCTGTTCTCAAACTCCTGACCTCAG...TCCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp AAAGGGACTGGAAAGAAGACTAAGGCTTCTAGATGGGAAATGCCAAAGTTTAAGCTGAGGTCAGGAGTTTaGGAACAGCCTGGTCAACAT +
Preference number: 4 (lower is better)
Translates to: KGTGKKTKASRWEMPKFKLRSGV*EQPGQH
Trigger: ATGTTGACCAGGCTGTTCTCAAACTCCTGACCTCAG...CTTAAACTTTGGCATTTCCCATCTAGAAGCCTTAGTCTTCTTTCCAGTCCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp AAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTAGAGAGCCCTCACCGTaGCATTACAGACCCATCCTG +
Preference number: 4 (lower is better)
Translates to: KPASKIRPLPIKITYTFAREPSP*HYRPIL
Trigger: CAGGATGGGTCTGTAATGTCACGGTGAGGGCTCTCT...AGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp ATTAAAAGCACTGTAGCTGCAGTGAGTCCATTGTTCTCTCTATCCAACTGTCCCGGGAGAGTCGCATTTTaGGTAGAAGTCGTCCTTAAT +
Preference number: 4 (lower is better)
Translates to: IKSTVAAVSPLFSLSNCPGRVAF*VEVVLN
Trigger: ATTAAGGACGACTTCTACTCAAAATGCGACTCTCCC...GGGACAGTTGGATAGAGAGAACAATGGACTCACTGCAGCTACAGTGCTTTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp TCTACAGCCACAAATGCCCGCAGTCACATAAATATATCCAATCCAATCAATGCCTCCATACGTTTGGGTTaGCTGAGGGTAGACAGCATA +
Preference number: 4 (lower is better)
Translates to: STATNARSHINISNPINASIRLG*LRVDSI
Trigger: TATGCTGTCTACCCTCAGGCAACCCAAACGTATGGA...GGCATTGATTGGATTGGATATATTTATGTGACTGCGGGCATTTGTGGCTGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp TCTACAGCCACAAATGCCCGCAGTCACATAAATATATCCAATCCAATCAATGCCGCTGGCTACTGCTGCTaGTGGAATATTGGCAATTGT +
Preference number: 4 (lower is better)
Translates to: STATNARSHINISNPINAAGYCC*WNIGNC
Trigger: ACAATTGCCAATATTCCAGCAGCAGCAGTAGCCAGC...GGCATTGATTGGATTGGATATATTTATGTGACTGCGGGCATTTGTGGCTGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp TATAACATTACGGTCACGGATTCTACAGCCACAAATGCCCGCAGTCACATAAATGATGCTGGCTACTGCTaGTGCTGGAATATTGGCAAT +
Preference number: 4 (lower is better)
Translates to: YNITVTDSTATNARSHINDAGYC*CWNIGN
Trigger: ATTGCCAATATTCCAGCAGCAGCAGTAGCCAGCATC...ATTTATGTGACTGCGGGCATTTGTGGCTGTAGAATCCGTGACCGTAATGTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp AAAGGGACTGGAAAGAAGACTAAGGCTTCTAGATGGGAAATGCCAAAGTTTAAGAATCCTGGTTTGAGATaGTGGCTACTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: KGTGKKTKASRWEMPKFKNPGLR*WLLLLL
Trigger: CAGCAGCAGCAGTAGCCAGCATCTCAAACCAGGATT...CTTAAACTTTGGCATTTCCCATCTAGAAGCCTTAGTCTTCTTTCCAGTCCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp AGATGGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACGGAGACCACCCACGTTaGTTTTATGCTTATCATAGA +
Preference number: 4 (lower is better)
Translates to: RWEMPKFKLLSVQCPTVHGDHPR*FYAYHR
Trigger: TCTATGATAAGCATAAAAGCAACGTGGGTGGTCTCC...GTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp ATTAAAAGCACTGTAGCTGCAGTGAGTCCATTGTTCTCTCTATCCAACTGTCCCGTTGTGCTGTTTGGCTaGAATTTCTTCATCTCGTCC +
Preference number: 4 (lower is better)
Translates to: IKSTVAAVSPLFSLSNCPVVLFG*NFFISS
Trigger: GGACGAGATGAAGAAATTGCAGCCAAACAGCACAAC...GGGACAGTTGGATAGAGAGAACAATGGACTCACTGCAGCTACAGTGCTTTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp ATTAAAAGCACTGTAGCTGCAGTGAGTCCATTGTTCTCTCTATCCAACTGTCCCCTATCCAACTGTCCCTaGTTCTGTATGGAGATGAAC +
Preference number: 4 (lower is better)
Translates to: IKSTVAAVSPLFSLSNCPLSNCP*FCMEMN
Trigger: GTTCATCTCCATACAGAAGCAGGGACAGTTGGATAG...GGGACAGTTGGATAGAGAGAACAATGGACTCACTGCAGCTACAGTGCTTTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp ACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGTTACTCAGTGTCCAGTaGCCCACAGTTCACCAGCTA +
Preference number: 4 (lower is better)
Translates to: TCVKDQTLTYKNNIHIRWLLSVQ*PTVHQL
Trigger: TAGCTGGTGAACTGTGGGGCACTGGACACTGAGTAA...CCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp CCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGATTACTCAGTGTCCAGTaGCCCACAGTTCACCAGCTA +
Preference number: 4 (lower is better)
Translates to: PASKIRPLPIKITYTFAGLLSVQ*PTVHQL
Trigger: TAGCTGGTGAACTGTGGGGCACTGGACACTGAGTAA...TCCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp AAAGGGACTGGAAAGAAGACTAAGGCTTCTAGATGGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTaGCCCACAGTTCACCAGCTA +
Preference number: 4 (lower is better)
Translates to: KGTGKKTKASRWEMPKFKLLSVQ*PTVHQL
Trigger: TAGCTGGTGAACTGTGGGGCACTGGACACTGAGTAA...CTTAAACTTTGGCATTTCCCATCTAGAAGCCTTAGTCTTCTTTCCAGTCCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp ACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGCAAGAAGGAAGAAGCTaGAGGGACGAGCATCTGATG +
Preference number: 4 (lower is better)
Translates to: TCVKDQTLTYKNNIHIRWQEGRS*RDEHLM
Trigger: CATCAGATGCTCGTCCCTGCAGCTTCTTCCTTCTTG...CCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp ACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGAGTAGATGCCCAAATTaGTCTTGGAGGGATGGGGCA +
Preference number: 4 (lower is better)
Translates to: TCVKDQTLTYKNNIHIRWSRCPN*SWRDGA
Trigger: TGCCCCATCCCTCCAAGAGCAATTTGGGCATCTACT...CCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp TTACATTCTAAAATAAAGAGCTCCCAAAAGGGTGGAGAGGGAAGTATCTGTGTGTCCTGCCTGAGTAGATaGCCAAATTGCTCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: LHSKIKSSQKGGEGSICVSCLSR*PNCSWR
Trigger: CCTCCAAGAGCAATTTGGGCATCTACTCAGGCAGGA...CACACAGATACTTCCCTCTCCACCCTTTTGGGAGCTCTTTATTTTAGAATGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GCTCTTCAGTTTCAGGCAGAGATCTGGGTAAATACATACCTGGGACATCCTTCACATCTCAATCTGAGGTaGTTGTATCATCTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: ALQFQAEIWVNTYLGHPSHLNLR*LYHLSL
Trigger: CAGAGAGAGATGATACAAGCACCTCAGATTGAGATG...TGAAGGATGTCCCAGGTATGTATTTACCCAGATCTCTGCCTGAAACTGAAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GCTCTTCAGTTTCAGGCAGAGATCTGGGTAAATACATACCTGGGACATCCTTCAAGTCTTGCCTCTTTGTaGTGCAACATCTCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: ALQFQAEIWVNTYLGHPSSLASL*CNISGN
Trigger: ATTTCCAGAGATGTTGCAGCACAAAGAGGCAAGACT...TGAAGGATGTCCCAGGTATGTATTTACCCAGATCTCTGCCTGAAACTGAAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp AAGGGACTGGAAAGAAGACTAAGGCTTCTAGATGGGAAATGCCAAAGTTTAAGTACCCAACAGCTATACTaGATAGGGGGAGGGTTTGAG +
Preference number: 4 (lower is better)
Translates to: KGLERRLRLLDGKCQSLSTQQLY*IGGGFE
Trigger: CTCAAACCCTCCCCCTATGCAGTATAGCTGTTGGGT...ACTTAAACTTTGGCATTTCCCATCTAGAAGCCTTAGTCTTCTTTCCAGTCCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GGGAAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCAAAGAGAACCCACCATaGCCAGCTAGGGAAGGACTC +
Preference number: 4 (lower is better)
Translates to: GKPASKIRPLPIKITYTFKENPP*PAREGL
Trigger: GAGTCCTTCCCTAGCTGGGCATGGTGGGTTCTCTTT...GAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GAAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCCTTGGCCCAGACCATTaGTCTACCCCATACTCCTCT +
Preference number: 4 (lower is better)
Translates to: ETCVKDQTLTYKNNIHIRLGPDH*STPYSS
Trigger: AGAGGAGTATGGGGTAGAGCAATGGTCTGGGCCAAG...GCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GGGAAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCCTTGGCCCAGACCATTaGTCTACCCCATACTCCTCT +
Preference number: 4 (lower is better)
Translates to: GKPASKIRPLPIKITYTFLGPDH*STPYSS
Trigger: AGAGGAGTATGGGGTAGAGCAATGGTCTGGGCCAAG...GAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GGGTGGAGAAAAAGGCAGGGTAATTACAGAGAGCACTGTGTTCCCTGGACAATTGTGAGGTATAATCATTaGATGAGCGAGGGATGTAAT +
Preference number: 4 (lower is better)
Translates to: GWRKRQGNYREHCVPWTIVRYNH*MSEGCN
Trigger: ATTACATCCCTCGCTCATCCAATGATTATACCTCAC...AATTGTCCAGGGAACACAGTGCTCTCTGTAATTACCCTGCCTTTTTCTCCACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp ATTAAAAGCACTGTAGCTGCAGTGAGTCCATTGTTCTCTCTATCCAACTGTCCCGGCTACTGCTGCTGCTaGAATATTGGCAATTGTAGA +
Preference number: 4 (lower is better)
Translates to: IKSTVAAVSPLFSLSNCPGYCCC*NIGNCR
Trigger: TCTACAATTGCCAATATTCCAGCAGCAGCAGTAGCC...GGGACAGTTGGATAGAGAGAACAATGGACTCACTGCAGCTACAGTGCTTTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp TTACATTCTAAAATAAAGAGCTCCCAAAAGGGTGGAGAGGGAAGTATCTGTGTGTCTCCGACTGGTATGTaGTTGCTGCTAATGTGGTGC +
Preference number: 4 (lower is better)
Translates to: LHSKIKSSQKGGEGSICVSPTGM*LLLMWC
Trigger: GCACCACATTAGCAGCAACCACATACCAGTCGGAGA...CACACAGATACTTCCCTCTCCACCCTTTTGGGAGCTCTTTATTTTAGAATGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp TATAACATTACGGTCACGGATTCTACAGCCACAAATGCCCGCAGTCACATAAATAGTCTGGGACAAAGATaGACTTGTAGAAGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: YNITVTDSTATNARSHINSLGQR*TCRRVS
Trigger: GGAGACCCTTCTACAAGTCCATCTTTGTCCCAGACT...ATTTATGTGACTGCGGGCATTTGTGGCTGTAGAATCCGTGACCGTAATGTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp AGATGGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACTCTAATTCACTGTCTTaGGAAGAAGTGGCATCAGCT +
Preference number: 4 (lower is better)
Translates to: RWEMPKFKLLSVQCPTVHSNSLS*EEVASA
Trigger: AGCTGATGCCACTTCTTCCCAAGACAGTGAATTAGA...GTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GGGAAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCTGTGCTGGGCTTGGCTaGCTTGTGGTTAACCCTGTA +
Preference number: 4 (lower is better)
Translates to: GKPASKIRPLPIKITYTFCAGLG*LVVNPV
Trigger: TACAGGGTTAACCACAAGCCAGCCAAGCCCAGCACA...GAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373871.8
ENST00000436342.6
CDS-3UTR CCA 90 bp GAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCTAGCATGTTGTGCTGTTTaGCTGCAATTTCTTCATCTC +
Preference number: 4 (lower is better)
Translates to: EMPKFKLLSVQCPTVHQLACCAV*LQFLHL
Trigger: GAGATGAAGAAATTGCAGCCAAACAGCACAACATGC...TAGCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCTAACAAGCAATTATAGCTaGGGTTGGTCAACAATGCCT +
Preference number: 4 (lower is better)
Translates to: EMPKFKLLSVQCPTVHQLTSNYS*GWSTMP
Trigger: AGGCATTGTTGACCAACCCCAGCTATAATTGCTTGT...TAGCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp AAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGCTATCTGGGTGGCCTaGCATTGGAAGGAGTCTTGC +
Preference number: 4 (lower is better)
Translates to: KPASKIRPLPIKITYTFAAIWVA*HWKESC
Trigger: GCAAGACTCCTTCCAATGCCAGGCCACCCAGATAGC...AGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp AGATGGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACAAACAAAAGCCCAGATaGGCATCTAAATCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: RWEMPKFKLLSVQCPTVHKQKPR*ASKSGA
Trigger: TGCTCCAGATTTAGATGCCCATCTGGGCTTTTGTTT...GTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp CCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGAAAGCTCACCATTCCTTaGCCCAGACCATTGCTCTAC +
Preference number: 4 (lower is better)
Translates to: PASKIRPLPIKITYTFAGKLTIP*PRPLLY
Trigger: GTAGAGCAATGGTCTGGGCCAAGGAATGGTGAGCTT...TCCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp AAGCCACCTCCTCAACCCAAGACACACCTCACTCCAGATCTACTACTAGAGAGAGGGAGTTCTAACTTCTaGATGAAAAAGGAAACCAAT +
Preference number: 4 (lower is better)
Translates to: KPPPQPKTHLTPDLLLERGSSNF*MKKETN
Trigger: ATTGGTTTCCTTTTTCATCCAGAAGTTAGAACTCCC...TCTCTCTAGTAGTAGATCTGGAGTGAGGTGTGTCTTGGGTTGAGGAGGTGGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCTATAGTGTGAATATCTaGGGAGTTCTAACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: GKCQSLSYSVSSAPQFTSYSVNI*GVLTSG
Trigger: TCCAGAAGTTAGAACTCCCCAGATATTCACACTATA...GCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp TCTACAGCCACAAATGCCCGCAGTCACATAAATATATCCAATCCAATCAATGCCCAGGCTTCTGATCACTaGCATCTGGATTGCTTACTT +
Preference number: 4 (lower is better)
Translates to: STATNARSHINISNPINAQASDH*HLDCLL
Trigger: AAGTAAGCAATCCAGATGTCAGTGATCAGAAGCCTG...GGCATTGATTGGATTGGATATATTTATGTGACTGCGGGCATTTGTGGCTGTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373871.8
ENST00000540618.5
CDS-3UTR TCA 90 bp ACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGTACCTCCTGAGCCACTaGAACCATCTGTTGAGAAAC +
Preference number: 4 (lower is better)
Translates to: TCVKDQTLTYKNNIHIRWYLLSH*NHLLRN
Trigger: GTTTCTCAACAGATGGTTTCAGTGGCTCAGGAGGTA...CCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp AAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTAGCTCCCTTCAGGAGTaGAAAGGAGCTCAAGGGGAA +
Preference number: 4 (lower is better)
Translates to: KPASKIRPLPIKITYTFASSLQE*KGAQGE
Trigger: TTCCCCTTGAGCTCCTTTTCACTCCTGAAGGGAGCT...AGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp CCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGAGCCTTGGCAACAATGTaGAAACCTGTCTGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: PASKIRPLPIKITYTFAGALATM*KPVCFS
Trigger: GGAGAAACAGACAGGTTTTCACATTGTTGCCAAGGC...TCCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp TTACATTCTAAAATAAAGAGCTCCCAAAAGGGTGGAGAGGGAAGTATCTGTGTGTCTAGGCAACTATGCTaGATACAGACCAAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LHSKIKSSQKGGEGSICVSRQLC*IQTKGR
Trigger: CCTTCCCTTGGTCTGTATTCAGCATAGTTGCCTAGA...CACACAGATACTTCCCTCTCCACCCTTTTGGGAGCTCTTTATTTTAGAATGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp AAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTCATAGGGGGAGGGTTTaGGGCCTCAGAGTAAAACCT +
Preference number: 4 (lower is better)
Translates to: KPASKIRPLPIKITYTFAHRGRV*GLRVKP
Trigger: AGGTTTTACTCTGAGGCCTCAAACCCTCCCCCTATG...AGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp ACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGGCTGGCTACTGCTGCTaGTGGAATATTGGCAATTGT +
Preference number: 4 (lower is better)
Translates to: TCVKDQTLTYKNNIHIRWAGYCC*WNIGNC
Trigger: ACAATTGCCAATATTCCAGCAGCAGCAGTAGCCAGC...CCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp TTACATTCTAAAATAAAGAGCTCCCAAAAGGGTGGAGAGGGAAGTATCTGTGTGGCTGGCTACTGCTGCTaGTGGAATATTGGCAATTGT +
Preference number: 4 (lower is better)
Translates to: LHSKIKSSQKGGEGSICVAGYCC*WNIGNC
Trigger: ACAATTGCCAATATTCCAGCAGCAGCAGTAGCCAGC...CACACAGATACTTCCCTCTCCACCCTTTTGGGAGCTCTTTATTTTAGAATGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp ATTAAAAGCACTGTAGCTGCAGTGAGTCCATTGTTCTCTCTATCCAACTGTCCCGGAGACCACCCACGTTaGTTTTATGCTTATCATAGA +
Preference number: 4 (lower is better)
Translates to: IKSTVAAVSPLFSLSNCPGDHPR*FYAYHR
Trigger: TCTATGATAAGCATAAAAGCAACGTGGGTGGTCTCC...GGGACAGTTGGATAGAGAGAACAATGGACTCACTGCAGCTACAGTGCTTTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GAAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCAGTAGATGCCCAAATTaGTCTTGGAGGGATGGGGCA +
Preference number: 4 (lower is better)
Translates to: ETCVKDQTLTYKNNIHIRSRCPN*SWRDGA
Trigger: TGCCCCATCCCTCCAAGAGCAATTTGGGCATCTACT...GCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp AAGGGACTGGAAAGAAGACTAAGGCTTCTAGATGGGAAATGCCAAAGTTTAAGTCTTGCCTCTTTGTGCTaGAACATCTCTGGAAATGGG +
Preference number: 4 (lower is better)
Translates to: KGLERRLRLLDGKCQSLSLASLC*NISGNG
Trigger: CCCATTTCCAGAGATGTTGCAGCACAAAGAGGCAAG...ACTTAAACTTTGGCATTTCCCATCTAGAAGCCTTAGTCTTCTTTCCAGTCCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp ATTAAAAGCACTGTAGCTGCAGTGAGTCCATTGTTCTCTCTATCCAACTGTCCCGCTGCAGCTAGAGTTTaGAAGTCAGATTCTATTTGG +
Preference number: 4 (lower is better)
Translates to: IKSTVAAVSPLFSLSNCPAAARV*KSDSIW
Trigger: CCAAATAGAATCTGACTTGCAAACTCTAGCTGCAGC...GGGACAGTTGGATAGAGAGAACAATGGACTCACTGCAGCTACAGTGCTTTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp AGATGGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACTGCTTACTTGATGGTTaGTCTGGTAAATCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: RWEMPKFKLLSVQCPTVHCLLDG*SGKSCS
Trigger: AGAGCAAGATTTACCAGAGCAACCATCAAGTAAGCA...GTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373864.5
CDS-3UTR CCA 90 bp GGGTGGAGAAAAAGGCAGGGTAATTACAGAGAGCACTGTGTTCCCTGGACAATTCTGATCACTGACATCTaGATTGCTTACTTGACTTAT +
Preference number: 4 (lower is better)
Translates to: GWRKRQGNYREHCVPWTILITDI*IAYLTY
Trigger: ATAAGTCAAGTAAGCAATCCAGATGTCAGTGATCAG...AATTGTCCAGGGAACACAGTGCTCTCTGTAATTACCCTGCCTTTTTCTCCACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373871.8
ENST00000540618.5
CDS-3UTR CCA 90 bp ACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGCTAGGCTTCTCCGACTaGTATGTGGTTGCTGCTAAT +
Preference number: 4 (lower is better)
Translates to: TCVKDQTLTYKNNIHIRWLGFSD*YVVAAN
Trigger: ATTAGCAGCAACCACATACCAGTCGGAGAAGCCTAG...CCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp ACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGAGTCTGGGACAAAGATaGACTTGTAGAAGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: TCVKDQTLTYKNNIHIRWSLGQR*TCRRVS
Trigger: GGAGACCCTTCTACAAGTCCATCTTTGTCCCAGACT...CCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp TCTACAGCCACAAATGCCCGCAGTCACATAAATATATCCAATCCAATCAATGCCTTCAGGTTTCATACCTaGCCACAATGCACCAAAAGG +
Preference number: 4 (lower is better)
Translates to: STATNARSHINISNPINAFRFHT*PQCTKR
Trigger: CCTTTTGGTGCATTGTGGCCAGGTATGAAACCTGAA...GGCATTGATTGGATTGGATATATTTATGTGACTGCGGGCATTTGTGGCTGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373871.8
ENST00000436342.6
CDS-3UTR CCA 90 bp TCTACAGCCACAAATGCCCGCAGTCACATAAATATATCCAATCCAATCAATGCCTCCAGATTTTTGTGTTaGGGTGGAGAAAAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: STATNARSHINISNPINASRFLC*GGEKGR
Trigger: CCTGCCTTTTTCTCCACCCCAACACAAAAATCTGGA...GGCATTGATTGGATTGGATATATTTATGTGACTGCGGGCATTTGTGGCTGTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR CAA 72 bp ATTACAGAGAGCACTGTGTTCCCTGGACAATTCATTTaGGCAAACAGCCAAGAAGCTCCTGTTTTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: ITESTVFPGQFI*ANSQEAPVFSL
Trigger: AAGAGAGAAAACAGGAGCTTCTTGGCTGTTTGCCAAAATGAATTGTCCAGGGAACACAGTGCTCTCTGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp AAGGGACTGGAAAGAAGACTAAGGCTTCTAGATGGGAAATGCCAAAGTTTAAGTGATGTTTCAGGCTTCTaGTCACTGACATCTGGATTG +
Preference number: 4 (lower is better)
Translates to: KGLERRLRLLDGKCQSLSDVSGF*SLTSGL
Trigger: CAATCCAGATGTCAGTGATCAGAAGCCTGAAACATC...ACTTAAACTTTGGCATTTCCCATCTAGAAGCCTTAGTCTTCTTTCCAGTCCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000540618.5
CDS-3UTR TCA 90 bp AAAGGGACTGGAAAGAAGACTAAGGCTTCTAGATGGGAAATGCCAAAGTTTAAGGGTATAATCATTGGATaGGCGAGGGATGTAATCGGT +
Preference number: 4 (lower is better)
Translates to: KGTGKKTKASRWEMPKFKGIIIG*ARDVIG
Trigger: ACCGATTACATCCCTCGCTCATCCAATGATTATACC...CTTAAACTTTGGCATTTCCCATCTAGAAGCCTTAGTCTTCTTTCCAGTCCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp CCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGAGGATCCAGTAAGAAGTaGGTGGAAGATGATGATGGT +
Preference number: 4 (lower is better)
Translates to: PASKIRPLPIKITYTFAGGSSKK*VEDDDG
Trigger: ACCATCATCATCTTCCACTCACTTCTTACTGGATCC...TCCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp TTACATTCTAAAATAAAGAGCTCCCAAAAGGGTGGAGAGGGAAGTATCTGTGTGGGATCCAGTAAGAAGTaGGTGGAAGATGATGATGGT +
Preference number: 4 (lower is better)
Translates to: LHSKIKSSQKGGEGSICVGSSKK*VEDDDG
Trigger: ACCATCATCATCTTCCACTCACTTCTTACTGGATCC...CACACAGATACTTCCCTCTCCACCCTTTTGGGAGCTCTTTATTTTAGAATGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp AAAGGGACTGGAAAGAAGACTAAGGCTTCTAGATGGGAAATGCCAAAGTTTAAGGGATCCAGTAAGAAGTaGGTGGAAGATGATGATGGT +
Preference number: 4 (lower is better)
Translates to: KGTGKKTKASRWEMPKFKGSSKK*VEDDDG
Trigger: ACCATCATCATCTTCCACTCACTTCTTACTGGATCC...CTTAAACTTTGGCATTTCCCATCTAGAAGCCTTAGTCTTCTTTCCAGTCCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp AAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTTGCAGCTGTTGGTTCTaGTTGTGTTCTCGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: KPASKIRPLPIKITYTFACSCWF*LCSRQH
Trigger: ATGCTGGCGAGAACACAATCAGAACCAACAGCTGCA...AGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp CCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGATCCTGTGATACAGTCTaGATGACAGTCAAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: PASKIRPLPIKITYTFAGSCDTV*MTVKLK
Trigger: CTTCAGCTTGACTGTCATTCAGACTGTATCACAGGA...TCCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp AAAGGGACTGGAAAGAAGACTAAGGCTTCTAGATGGGAAATGCCAAAGTTTAAGAAGCTAAGCCTCCTGTaGTACAGTCTGAATGACAGT +
Preference number: 4 (lower is better)
Translates to: KGTGKKTKASRWEMPKFKKLSLL*YSLNDS
Trigger: ACTGTCATTCAGACTGTATCACAGGAGGCTTAGCTT...CTTAAACTTTGGCATTTCCCATCTAGAAGCCTTAGTCTTCTTTCCAGTCCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp ACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGAAGCTAAGCCTCCTGTaGTACAGTCTGAATGACAGT +
Preference number: 4 (lower is better)
Translates to: TCVKDQTLTYKNNIHIRWKLSLL*YSLNDS
Trigger: ACTGTCATTCAGACTGTATCACAGGAGGCTTAGCTT...CCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp TTACATTCTAAAATAAAGAGCTCCCAAAAGGGTGGAGAGGGAAGTATCTGTGTGATGCAGAATCTCTGGTaGCAAGCAATTATAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LHSKIKSSQKGGEGSICVMQNLW*QAIIAG
Trigger: CCCAGCTATAATTGCTTGTCACCAGAGATTCTGCAT...CACACAGATACTTCCCTCTCCACCCTTTTGGGAGCTCTTTATTTTAGAATGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp AAGGGACTGGAAAGAAGACTAAGGCTTCTAGATGGGAAATGCCAAAGTTTAAGTGGGAGAGTCGCATTTTaGGTAGAAGTCGTCCTTAAT +
Preference number: 4 (lower is better)
Translates to: KGLERRLRLLDGKCQSLSGRVAF*VEVVLN
Trigger: ATTAAGGACGACTTCTACTCAAAATGCGACTCTCCC...ACTTAAACTTTGGCATTTCCCATCTAGAAGCCTTAGTCTTCTTTCCAGTCCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp TTACATTCTAAAATAAAGAGCTCCCAAAAGGGTGGAGAGGGAAGTATCTGTGTGTGCTCTGGTAAATCTTaGTCTTCTTCCATGAGGACC +
Preference number: 4 (lower is better)
Translates to: LHSKIKSSQKGGEGSICVCSGKS*SSSMRT
Trigger: GGTCCTCATGGAAGAAGAGCAAGATTTACCAGAGCA...CACACAGATACTTCCCTCTCCACCCTTTTGGGAGCTCTTTATTTTAGAATGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GGGAAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCTCTGCTCTTAATCTCTaGAGTGCTTCCTTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: GKPASKIRPLPIKITYTFSALNL*SASFLW
Trigger: CCAGAGGAAGGAAGCACTGCAGAGATTAAGAGCAGA...GAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp AAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGTCGAGAGATGCTCCTaGATTTGGCCCAGGATTAAG +
Preference number: 4 (lower is better)
Translates to: KPASKIRPLPIKITYTFAVERCS*IWPRIK
Trigger: CTTAATCCTGGGCCAAATGCAGGAGCATCTCTCGAC...AGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp AAAGGGACTGGAAAGAAGACTAAGGCTTCTAGATGGGAAATGCCAAAGTTTAAGCTCTGGAAATGGGTATaGAGAATCTCTGGTGACAAG +
Preference number: 4 (lower is better)
Translates to: KGTGKKTKASRWEMPKFKLWKWV*RISGDK
Trigger: CTTGTCACCAGAGATTCTGCATACCCATTTCCAGAG...CTTAAACTTTGGCATTTCCCATCTAGAAGCCTTAGTCTTCTTTCCAGTCCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp AGATGGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACTTATACTTATGTGACTaGATTGCAAGTCTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: RWEMPKFKLLSVQCPTVHLYLCD*IASLSQ
Trigger: CTGAGAGAGACTTGCAATCCAGTCACATAAGTATAA...GTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp ATTAAAAGCACTGTAGCTGCAGTGAGTCCATTGTTCTCTCTATCCAACTGTCCCCCAGTAAGAAGTGAGTaGAAGATGATGATGGTTTCA +
Preference number: 4 (lower is better)
Translates to: IKSTVAAVSPLFSLSNCPPVRSE*KMMMVS
Trigger: TGAAACCATCATCATCTTCCACTCACTTCTTACTGG...GGGACAGTTGGATAGAGAGAACAATGGACTCACTGCAGCTACAGTGCTTTTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp CCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGATCTTCCACATGTACCTaGTCACACTCCTCTAAGTCA +
Preference number: 4 (lower is better)
Translates to: PASKIRPLPIKITYTFAGSSTCT*SHSSKS
Trigger: TGACTTAGAGGAGTGTGACCAGGTACATGTGGAAGA...TCCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCTACAATTCTTTCTGGACTaGATGAGAAGTAAGGACTTT +
Preference number: 4 (lower is better)
Translates to: EMPKFKLLSVQCPTVHQLQFFLD*MRSKDF
Trigger: AAAGTCCTTACTTCTCATCCAGTCCAGAAAGAATTG...TAGCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp AAGGGACTGGAAAGAAGACTAAGGCTTCTAGATGGGAAATGCCAAAGTTTAAGTTTCAGGTTTCATACCTaGCCACAATGCACCAAAAGG +
Preference number: 4 (lower is better)
Translates to: KGLERRLRLLDGKCQSLSFRFHT*PQCTKR
Trigger: CCTTTTGGTGCATTGTGGCCAGGTATGAAACCTGAA...ACTTAAACTTTGGCATTTCCCATCTAGAAGCCTTAGTCTTCTTTCCAGTCCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373871.8
ENST00000436342.6
CDS-3UTR CCA 90 bp CCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGAGCTAGAAAAAGAAAGTaGGGGAAACCTGCGTCAAAG +
Preference number: 4 (lower is better)
Translates to: PASKIRPLPIKITYTFAGARKRK*GKPASK
Trigger: CTTTGACGCAGGTTTCCCCCACTTTCTTTTTCTAGC...TCCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp AGATGGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACGGAAGTCAAATACATTaGCAGTTTTGGCCAAAATGT +
Preference number: 4 (lower is better)
Translates to: RWEMPKFKLLSVQCPTVHGSQIH*QFWPKC
Trigger: ACATTTTGGCCAAAACTGCCAATGTATTTGACTTCC...GTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCTATCAGCAAAGTCTTTCTaGTTTCCTACTTTAGAATGG +
Preference number: 4 (lower is better)
Translates to: EMPKFKLLSVQCPTVHQLSAKSF*FPTLEW
Trigger: CCATTCTAAAGTAGGAAACCAGAAAGACTTTGCTGA...TAGCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp AAGGGACTGGAAAGAAGACTAAGGCTTCTAGATGGGAAATGCCAAAGTTTAAGTGTTCAAGACCAGCCTTaGCAACAATGTGAAAACCTG +
Preference number: 4 (lower is better)
Translates to: KGLERRLRLLDGKCQSLSVQDQP*QQCENL
Trigger: CAGGTTTTCACATTGTTGCCAAGGCTGGTCTTGAAC...ACTTAAACTTTGGCATTTCCCATCTAGAAGCCTTAGTCTTCTTTCCAGTCCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp TATAACATTACGGTCACGGATTCTACAGCCACAAATGCCCGCAGTCACATAAATCAACATCTCTGGAAATaGGTATGCAGAATCTCTGGT +
Preference number: 4 (lower is better)
Translates to: YNITVTDSTATNARSHINQHLWK*VCRISG
Trigger: ACCAGAGATTCTGCATACCCATTTCCAGAGATGTTG...ATTTATGTGACTGCGGGCATTTGTGGCTGTAGAATCCGTGACCGTAATGTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp TTACATTCTAAAATAAAGAGCTCCCAAAAGGGTGGAGAGGGAAGTATCTGTGTGGTGCTGCAACATCTCTaGAAATGGGTATGCAGAATC +
Preference number: 4 (lower is better)
Translates to: LHSKIKSSQKGGEGSICVVLQHL*KWVCRI
Trigger: GATTCTGCATACCCATTTCCAGAGATGTTGCAGCAC...CACACAGATACTTCCCTCTCCACCCTTTTGGGAGCTCTTTATTTTAGAATGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp TTACATTCTAAAATAAAGAGCTCCCAAAAGGGTGGAGAGGGAAGTATCTGTGTGGTGGCATCAGTCTCTTaGGACAACTCACTAGCTTTA +
Preference number: 4 (lower is better)
Translates to: LHSKIKSSQKGGEGSICVVASVS*DNSLAL
Trigger: TAAAGCTAGTGAGTTGTCCCAAGAGACTGATGCCAC...CACACAGATACTTCCCTCTCCACCCTTTTGGGAGCTCTTTATTTTAGAATGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp CCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGAGTGGCATCAGTCTCTTaGGACAACTCACTAGCTTTA +
Preference number: 4 (lower is better)
Translates to: PASKIRPLPIKITYTFAGVASVS*DNSLAL
Trigger: TAAAGCTAGTGAGTTGTCCCAAGAGACTGATGCCAC...TCCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp AAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTAAGCTCACCATTCCTTaGCCCAGACCATTGCTCTAC +
Preference number: 4 (lower is better)
Translates to: KPASKIRPLPIKITYTFAKLTIP*PRPLLY
Trigger: GTAGAGCAATGGTCTGGGCCAAGGAATGGTGAGCTT...AGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
3UTR CAA 72 bp AGAAAAATTAAAAGCACTGTAGCTGCAGTGAGTCCATaGTTCTCTCTATCCAACTGTCCCTGCTTCTGTATG +
Preference number: 4 (lower is better)
Translates to: RKIKSTVAAVSP*FSLSNCPCFCM
Trigger: CATACAGAAGCAGGGACAGTTGGATAGAGAGAACAATGGACTCACTGCAGCTACAGTGCTTTTAATTTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp GGGAAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGCATTTGTGCTTaGAGCTTGAATGGGATAAGA +
Preference number: 4 (lower is better)
Translates to: GKPASKIRPLPIKITYTFAGICA*SLNGIR
Trigger: TCTTATCCCATTCAAGCTTCAAGCACAAATGCCAGC...GAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373871.8
ENST00000436342.6
CDS-3UTR TCA 90 bp GGGAAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCAAGCTAAGCCTCCTGTaGTACAGTCTGAATGACAGT +
Preference number: 4 (lower is better)
Translates to: GKPASKIRPLPIKITYTFKLSLL*YSLNDS
Trigger: ACTGTCATTCAGACTGTATCACAGGAGGCTTAGCTT...GAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp ACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGGAATTTTATCCTGCCTaGGTAGATGCCCAAATTGCT +
Preference number: 4 (lower is better)
Translates to: TCVKDQTLTYKNNIHIRWEFYPA*VDAQIA
Trigger: AGCAATTTGGGCATCTACTCAGGCAGGATAAAATTC...CCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp GAAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGCTCTGGTAAATCTTaGTCTTCTTCCATGAGGACC +
Preference number: 4 (lower is better)
Translates to: ETCVKDQTLTYKNNIHIRCSGKS*SSSMRT
Trigger: GGTCCTCATGGAAGAAGAGCAAGATTTACCAGAGCA...GCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp CCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGACATCTCAATCTGAGGTaGTTGTATCATCTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: PASKIRPLPIKITYTFAGHLNLR*LYHLSL
Trigger: CAGAGAGAGATGATACAAGCACCTCAGATTGAGATG...TCCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp AAGGGACTGGAAAGAAGACTAAGGCTTCTAGATGGGAAATGCCAAAGTTTAAGTAGTCTTGCCTCTTTGTaGTGCAACATCTCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: KGLERRLRLLDGKCQSLSSLASL*CNISGN
Trigger: ATTTCCAGAGATGTTGCAGCACAAAGAGGCAAGACT...ACTTAAACTTTGGCATTTCCCATCTAGAAGCCTTAGTCTTCTTTCCAGTCCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp CCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGATCAGGCTGGCATTTGTaGTTGAAGTTTGCAGAATAC +
Preference number: 4 (lower is better)
Translates to: PASKIRPLPIKITYTFAGSGWHL*LKFAEY
Trigger: GTATTCTGCAAACTTCAAGCACAAATGCCAGCCTGA...TCCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373864.5
CDS-3UTR CCA 90 bp ACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGGCATGTTGTGCTGTTTaGCTGCAATTTCTTCATCTC +
Preference number: 4 (lower is better)
Translates to: TCVKDQTLTYKNNIHIRWACCAV*LQFLHL
Trigger: GAGATGAAGAAATTGCAGCCAAACAGCACAACATGC...CCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp AAGGGACTGGAAAGAAGACTAAGGCTTCTAGATGGGAAATGCCAAAGTTTAAGTGATACTAGGTCTCCATaGTTTGTGATCCTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: KGLERRLRLLDGKCQSLSDTRSP*FVILQK
Trigger: TTTCTGGAGGATCACAAACCATGGAGACCTAGTATC...ACTTAAACTTTGGCATTTCCCATCTAGAAGCCTTAGTCTTCTTTCCAGTCCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp AAAGGGACTGGAAAGAAGACTAAGGCTTCTAGATGGGAAATGCCAAAGTTTAAGGATACTAGGTCTCCATaGTTTGTGATCCTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: KGTGKKTKASRWEMPKFKDTRSP*FVILQK
Trigger: TTTCTGGAGGATCACAAACCATGGAGACCTAGTATC...CTTAAACTTTGGCATTTCCCATCTAGAAGCCTTAGTCTTCTTTCCAGTCCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp ACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGTTCTCAATCTGGTCATaGACTAAGAGTGCAACTCTG +
Preference number: 4 (lower is better)
Translates to: TCVKDQTLTYKNNIHIRWFSIWS*TKSATL
Trigger: CAGAGTTGCACTCTTAGTCCATGACCAGATTGAGAA...CCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp TTACATTCTAAAATAAAGAGCTCCCAAAAGGGTGGAGAGGGAAGTATCTGTGTGCTGGACAATTCATTTTaGCAAACAGCCAAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: LHSKIKSSQKGGEGSICVLDNSF*QTAKKL
Trigger: GAGCTTCTTGGCTGTTTGCCAAAATGAATTGTCCAG...CACACAGATACTTCCCTCTCCACCCTTTTGGGAGCTCTTTATTTTAGAATGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp TTACATTCTAAAATAAAGAGCTCCCAAAAGGGTGGAGAGGGAAGTATCTGTGTGAAACAAAAGCCCAGATaGGCATCTAAATCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: LHSKIKSSQKGGEGSICVKQKPR*ASKSGA
Trigger: TGCTCCAGATTTAGATGCCCATCTGGGCTTTTGTTT...CACACAGATACTTCCCTCTCCACCCTTTTGGGAGCTCTTTATTTTAGAATGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp GAAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTATAGTTTGCTCTCCTaGTTCCTGCATCTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: ETCVKDQTLTYKNNIHIRYSLLS*FLHLGF
Trigger: AAAGCCAAGATGCAGGAATCAGGAGAGCAAACTATA...GCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp AAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGTATAATCATTGGATaGGCGAGGGATGTAATCGGT +
Preference number: 4 (lower is better)
Translates to: KPASKIRPLPIKITYTFAGIIIG*ARDVIG
Trigger: ACCGATTACATCCCTCGCTCATCCAATGATTATACC...AGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp AAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTTCCTGTGATACAGTCTaGATGACAGTCAAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: KPASKIRPLPIKITYTFASCDTV*MTVKLK
Trigger: CTTCAGCTTGACTGTCATTCAGACTGTATCACAGGA...AGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp AAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTTCTCTTCCATTTAAATaGGGGTGGCAACAACCAGGA +
Preference number: 4 (lower is better)
Translates to: KPASKIRPLPIKITYTFASLPFK*GWQQPG
Trigger: TCCTGGTTGTTGCCACCCTCATTTAAATGGAAGAGA...AGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp AAAGGGACTGGAAAGAAGACTAAGGCTTCTAGATGGGAAATGCCAAAGTTTAAGGCTGGCATTTGTGCTTaGAGTTTGCAGAATACATTT +
Preference number: 4 (lower is better)
Translates to: KGTGKKTKASRWEMPKFKAGICA*SLQNTF
Trigger: AAATGTATTCTGCAAACTTCAAGCACAAATGCCAGC...CTTAAACTTTGGCATTTCCCATCTAGAAGCCTTAGTCTTCTTTCCAGTCCCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373864.5
CDS-3UTR GCA 90 bp GAAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCGGAGACCACCCACGTTaGTTTTATGCTTATCATAGA +
Preference number: 4 (lower is better)
Translates to: ETCVKDQTLTYKNNIHIRGDHPR*FYAYHR
Trigger: TCTATGATAAGCATAAAAGCAACGTGGGTGGTCTCC...GCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp AAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGTTGTGCTGTTTGGCTaGAATTTCTTCATCTCGTCC +
Preference number: 4 (lower is better)
Translates to: KPASKIRPLPIKITYTFAVVLFG*NFFISS
Trigger: GGACGAGATGAAGAAATTGCAGCCAAACAGCACAAC...AGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp ATTAAAAGCACTGTAGCTGCAGTGAGTCCATTGTTCTCTCTATCCAACTGTCCCATCATAAAAGTCTGCTaGATTTATCTGATCACCACA +
Preference number: 4 (lower is better)
Translates to: IKSTVAAVSPLFSLSNCPIIKVC*IYLITT
Trigger: TGTGGTGATCAGATAAATGCAGCAGACTTTTATGAT...GGGACAGTTGGATAGAGAGAACAATGGACTCACTGCAGCTACAGTGCTTTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp ATTAAAAGCACTGTAGCTGCAGTGAGTCCATTGTTCTCTCTATCCAACTGTCCCGTTATCATAAAAGTCTaGTGCATTTATCTGATCACC +
Preference number: 4 (lower is better)
Translates to: IKSTVAAVSPLFSLSNCPVIIKV*CIYLIT
Trigger: GGTGATCAGATAAATGCAGCAGACTTTTATGATAAC...GGGACAGTTGGATAGAGAGAACAATGGACTCACTGCAGCTACAGTGCTTTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp AAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTCTCTGGAAATGGGTATaGAGAATCTCTGGTGACAAG +
Preference number: 4 (lower is better)
Translates to: KPASKIRPLPIKITYTFALWKWV*RISGDK
Trigger: CTTGTCACCAGAGATTCTGCATACCCATTTCCAGAG...AGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp TATAACATTACGGTCACGGATTCTACAGCCACAAATGCCCGCAGTCACATAAATTTATACTTATGTGACTaGATTGCAAGTCTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: YNITVTDSTATNARSHINLYLCD*IASLSQ
Trigger: CTGAGAGAGACTTGCAATCCAGTCACATAAGTATAA...ATTTATGTGACTGCGGGCATTTGTGGCTGTAGAATCCGTGACCGTAATGTTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GAAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTCTAATTCACTGTCTTaGGAAGAAGTGGCATCAGCT +
Preference number: 4 (lower is better)
Translates to: ETCVKDQTLTYKNNIHIRSNSLS*EEVASA
Trigger: AGCTGATGCCACTTCTTCCCAAGACAGTGAATTAGA...GCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GGGAAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCCAATCACTACTGTTaGGTCCTTTCCATATTTCTG +
Preference number: 4 (lower is better)
Translates to: GKPASKIRPLPIKITYTFANHYC*VLSIFL
Trigger: CAGAAATATGGAAAGGACCCAACAGTAGTGATTGGC...GAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp GGGAAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCTTTCAGGCAGAGATCTaGGTAAATACATACCTGGGA +
Preference number: 4 (lower is better)
Translates to: GKPASKIRPLPIKITYTFFQAEI*VNTYLG
Trigger: TCCCAGGTATGTATTTACCCAGATCTCTGCCTGAAA...GAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp AAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGTGGCATCAGTCTCTTaGGACAACTCACTAGCTTTA +
Preference number: 4 (lower is better)
Translates to: KPASKIRPLPIKITYTFAVASVS*DNSLAL
Trigger: TAAAGCTAGTGAGTTGTCCCAAGAGACTGATGCCAC...AGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp AAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTCTTGGAGATGGAGTCTaGATTAAACCACTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: KPASKIRPLPIKITYTFALGDGV*IKPLSG
Trigger: ACCTGAAAGTGGTTTAATTCAGACTCCATCTCCAAG...AGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373871.8
ENST00000436342.6
CDS-3UTR CCA 90 bp TTACATTCTAAAATAAAGAGCTCCCAAAAGGGTGGAGAGGGAAGTATCTGTGTGTTATACTTATGTGACTaGATTGCAAGTCTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: LHSKIKSSQKGGEGSICVLYLCD*IASLSQ
Trigger: CTGAGAGAGACTTGCAATCCAGTCACATAAGTATAA...CACACAGATACTTCCCTCTCCACCCTTTTGGGAGCTCTTTATTTTAGAATGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp AAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTTCTAATTCACTGTCTTaGGAAGAAGTGGCATCAGCT +
Preference number: 4 (lower is better)
Translates to: KPASKIRPLPIKITYTFASNSLS*EEVASA
Trigger: AGCTGATGCCACTTCTTCCCAAGACAGTGAATTAGA...AGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp TTACATTCTAAAATAAAGAGCTCCCAAAAGGGTGGAGAGGGAAGTATCTGTGTGCAATTCTTTCTGGACTaGATGAGAAGTAAGGACTTT +
Preference number: 4 (lower is better)
Translates to: LHSKIKSSQKGGEGSICVQFFLD*MRSKDF
Trigger: AAAGTCCTTACTTCTCATCCAGTCCAGAAAGAATTG...CACACAGATACTTCCCTCTCCACCCTTTTGGGAGCTCTTTATTTTAGAATGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CCA 90 bp ACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGTATAGTGTGAATATCTaGGGAGTTCTAACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: TCVKDQTLTYKNNIHIRWYSVNI*GVLTSG
Trigger: TCCAGAAGTTAGAACTCCCCAGATATTCACACTATA...CCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR TCA 90 bp AAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTCTTTTCAATGAGTTCTaGAGGAATGTGTATACCAGC +
Preference number: 4 (lower is better)
Translates to: KPASKIRPLPIKITYTFALFNEF*RNVYTS
Trigger: GCTGGTATACACATTCCTTCAGAACTCATTGAAAAG...AGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp TTACATTCTAAAATAAAGAGCTCCCAAAAGGGTGGAGAGGGAAGTATCTGTGTGATCATAAAAGTCTGCTaGATTTATCTGATCACCACA +
Preference number: 4 (lower is better)
Translates to: LHSKIKSSQKGGEGSICVIIKVC*IYLITT
Trigger: TGTGGTGATCAGATAAATGCAGCAGACTTTTATGAT...CACACAGATACTTCCCTCTCCACCCTTTTGGGAGCTCTTTATTTTAGAATGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp TTACATTCTAAAATAAAGAGCTCCCAAAAGGGTGGAGAGGGAAGTATCTGTGTGGTTATCATAAAAGTCTaGTGCATTTATCTGATCACC +
Preference number: 4 (lower is better)
Translates to: LHSKIKSSQKGGEGSICVVIIKV*CIYLIT
Trigger: GGTGATCAGATAAATGCAGCAGACTTTTATGATAAC...CACACAGATACTTCCCTCTCCACCCTTTTGGGAGCTCTTTATTTTAGAATGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR GCA 90 bp AAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGAGTTTTTAGGGTTGTaGCATTTGACTAAAGGGAAA +
Preference number: 4 (lower is better)
Translates to: KPASKIRPLPIKITYTFAEFLGL*HLTKGK
Trigger: TTTCCCTTTAGTCAAATGGCACAACCCTAAAAACTC...AGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp GAGAGCCCTCACCGTGACATTACAGACCCATCCTGTAGAACCCACAGTGCCTGGCTGGGTGGCCTGGCATaGGAAGGAGTCTTGCCTCTT +
Preference number: 5 (lower is better)
Translates to: ESPHRDITDPSCRTHSAWLGGLA*EGVLPL
Trigger: AAGAGGCAAGACTCCTTCCAATGCCAGGCCACCCAG...CCAGGCACTGTGGGTTCTACAGGATGGGTCTGTAATGTCACGGTGAGGGCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp GAGGAAGGGACAGATGGCCTGCTGACTGGGGCTGAGGCAGAACTAGATTTTCTCCCTTGGCCCAGACCATaGCTCTACCCCATACTCCTC +
Preference number: 5 (lower is better)
Translates to: EEGTDGLLTGAEAELDFLPWPRP*LYPILL
Trigger: GAGGAGTATGGGGTAGAGCAATGGTCTGGGCCAAGG...GAGAAAATCTAGTTCTGCCTCAGCCCCAGTCAGCAGGCCATCTGTCCCTTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS GCA 90 bp TGGACTTGTAGAAGGGTCTCCAGAGGAAAGTCTCTGTGCTGCAGGTaGAGGCGCCATGACACTAGGCTTCTCCGACTGGTATGTGGTTGC +
Preference number: 5 (lower is better)
Translates to: WTCRRVSRGKSLCCR*RRHDTRLLRLVCGC
Trigger: GCAACCACATACCAGTCGGAGAAGCCTAGTGTCATGGCGCCTGCACCTGCAGCACAGAGACTTTCCTCTGGAGACCCTTCTACAAGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000373863.3
ENST00000373871.8
ENST00000436342.6
ENST00000468665.1
ENST00000471498.5
ENST00000540618.5
CDS-3UTR CAA 90 bp CCAGAGGTCGAGAGATGCTCCTGCATTTGGCCCAGGATTAAGTTTTGGGCCATGCCTTGGCCCAGACCATaGCTCTACCCCATACTCCTC +
Preference number: 5 (lower is better)
Translates to: PEVERCSCIWPRIKFWAMPWPRP*LYPILL
Trigger: GAGGAGTATGGGGTAGAGCAATGGTCTGGGCCAAGG...CATGGCCCAAAACTTAATCCTGGGCCAAATGCAGGAGCATCTCTCGACCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS GCA 90 bp AGATGGACTTGTAGAAGGGTCAGAGGAAAGTCTCTGTGCTGCAGGTaGAGGCGCCATGACACTAGGCTTCTCCGACTGGTATGTGGTTGC +
Preference number: 5 (lower is better)
Translates to: RWTCRRVRGKSLCCR*RRHDTRLLRLVCGC
Trigger: GCAACCACATACCAGTCGGAGAAGCCTAGTGTCATGGCGCCTGCACCTGCAGCACAGAGACTTTCCTCTGACCCTTCTACAAGTCCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373864.5
CDS CCA 90 bp CTCTGTGCTGCAGGTGCAGGCGCCATGACACTAGGCTTCTCCGACTaGTATGTGGTTGCTGCTAATGTGGTGCTCTCTGCATCACTGTTA +
Preference number: 5 (lower is better)
Translates to: LCAAGAGAMTLGFSD*YVVAANVVLSASLL
Trigger: TAACAGTGATGCAGAGAGCACCACATTAGCAGCAACCACATACCAGTCGGAGAAGCCTAGTGTCATGGCGCCTGCACCTGCAGCACAGAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000373863.3
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000468665.1
ENST00000471498.5
ENST00000540618.5
CDS-3UTR CAA 90 bp CCATGGATAAAGACAGAGAGAGAGAGAGAGAGAGAGGCAGAGAGGGAGGGAGAGGCATCAGCTTTCCTCTaGCCCCGGTTCTTGCTAGTC +
Preference number: 5 (lower is better)
Translates to: PWIKTEREREREAEREGEASAFL*PRFLLV
Trigger: GACTAGCAAGAACCGGGGCAAGAGGAAAGCTGATGC...CTCTCCCTCCCTCTCTGCCTCTCTCTCTCTCTCTCTCTCTGTCTTTATCCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp GTTCTCTCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGCCAAGGAGCCTTGCTaGCCAGAGCTGTCTGACTCA +
Preference number: 5 (lower is better)
Translates to: VLSIQLSLLLYGDEHGAAAKEPC*PELSDS
Trigger: TGAGTCAGACAGCTCTGGCAAGCAAGGCTCCTTGGC...TGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp GAGGAAGGGACAGATGGCCTGCTGACTGGGGCTGAGGCAGAACTAGATTTTCTCTTCCTTCTCTCCAGTTaGGAAGCTAAGCCTCCTGTG +
Preference number: 5 (lower is better)
Translates to: EEGTDGLLTGAEAELDFLFLLSS*EAKPPV
Trigger: CACAGGAGGCTTAGCTTCCAAACTGGAGAGAAGGAA...GAGAAAATCTAGTTCTGCCTCAGCCCCAGTCAGCAGGCCATCTGTCCCTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp GTTCTCTCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCATACAATCCCAACACTTaGAGAGGCCGAGGTGGGAGG +
Preference number: 5 (lower is better)
Translates to: VLSIQLSLLLYGDEHGAAYNPNT*RGRGGR
Trigger: CCTCCCACCTCGGCCTCTCAAAGTGTTGGGATTGTA...TGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp CCATGGATAAAGACAGAGAGAGAGAGAGAGAGAGAGGCAGAGAGGGAGGGAGAGATGCCCAAATTGCTCTaGGAGGGATGGGGCATCCAA +
Preference number: 5 (lower is better)
Translates to: PWIKTEREREREAEREGEMPKLL*EGWGIQ
Trigger: TTGGATGCCCCATCCCTCCAAGAGCAATTTGGGCAT...CTCTCCCTCCCTCTCTGCCTCTCTCTCTCTCTCTCTCTCTGTCTTTATCCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp GGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCCTGGGTGGCCTGGCATaGGAAGGAGTCTTGCCTCTT +
Preference number: 5 (lower is better)
Translates to: GKCQSLSYSVSSAPQFTSLGGLA*EGVLPL
Trigger: AAGAGGCAAGACTCCTTCCAATGCCAGGCCACCCAG...GCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp CCAGAGGTCGAGAGATGCTCCTGCATTTGGCCCAGGATTAAGTTTTGGGCCATGCAACAGCCGTGGCCTTaGTCCAGGACAAAAACCCAA +
Preference number: 5 (lower is better)
Translates to: PEVERCSCIWPRIKFWAMQQPWP*SRTKTQ
Trigger: TTGGGTTTTTGTCCTGGACAAAGGCCACGGCTGTTG...CATGGCCCAAAACTTAATCCTGGGCCAAATGCAGGAGCATCTCTCGACCTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp GGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCTCTGTGTGTGTGTGCTaGCGTGCATGGTGGGGGTAC +
Preference number: 5 (lower is better)
Translates to: GKCQSLSYSVSSAPQFTSSVCVC*RAWWGY
Trigger: GTACCCCCACCATGCACGCAAGCACACACACACAGA...GCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp AAGCCACCTCCTCAACCCAAGACACACCTCACTCCAGATCTACTACTAGAGAGACCTTGGCCCAGACCATaGCTCTACCCCATACTCCTC +
Preference number: 5 (lower is better)
Translates to: KPPPQPKTHLTPDLLLERPWPRP*LYPILL
Trigger: GAGGAGTATGGGGTAGAGCAATGGTCTGGGCCAAGG...TCTCTCTAGTAGTAGATCTGGAGTGAGGTGTGTCTTGGGTTGAGGAGGTGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp TCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGCTCACACCCTAACTGCCTCCTaGAGGAGTAAGGAGTCAGAG +
Preference number: 5 (lower is better)
Translates to: SIQLSLLLYGDEHGAAAHTLTAS*RSKESE
Trigger: CTCTGACTCCTTACTCCTCAAGGAGGCAGTTAGGGT...GTGAGCTGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp GAGGAAGGGACAGATGGCCTGCTGACTGGGGCTGAGGCAGAACTAGATTTTCTCGTAGTTGCTCAAGTCTaGGCCATTGTCATCAGAAGC +
Preference number: 5 (lower is better)
Translates to: EEGTDGLLTGAEAELDFLVVAQV*AIVIRS
Trigger: GCTTCTGATGACAATGGCCAAGACTTGAGCAACTAC...GAGAAAATCTAGTTCTGCCTCAGCCCCAGTCAGCAGGCCATCTGTCCCTTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp GACCAAGAAGGAAGAAGCTGCAGGGACGAGCATCTGATGGGAAATGGGTGCTTCGCATTGGAAGGAGTCTaGCCTCTTTGTGCTGCAACA +
Preference number: 5 (lower is better)
Translates to: DQEGRSCRDEHLMGNGCFALEGV*PLCAAT
Trigger: TGTTGCAGCACAAAGAGGCAAGACTCCTTCCAATGC...GAAGCACCCATTTCCCATCAGATGCTCGTCCCTGCAGCTTCTTCCTTCTTGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp CATGAGGACTCTAATGAAGAGGGTCTCCCCCTTGATGAATGGACCCACAGTGTCCAACAGCCGTGGCCTTaGTCCAGGACAAAAACCCAA +
Preference number: 5 (lower is better)
Translates to: HEDSNEEGLPLDEWTHSVQQPWP*SRTKTQ
Trigger: TTGGGTTTTTGTCCTGGACAAAGGCCACGGCTGTTG...GACACTGTGGGTCCATTCATCAAGGGGGAGACCCTCTTCATTAGAGTCCTCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp GAGGAAGGGACAGATGGCCTGCTGACTGGGGCTGAGGCAGAACTAGATTTTCTCCTGACATGGGAAGGTTaGAAGCAAGGCTTGATGTTT +
Preference number: 5 (lower is better)
Translates to: EEGTDGLLTGAEAELDFLLTWEG*KQGLMF
Trigger: AAACATCAAGCCTTGCTTCAAACCTTCCCATGTCAG...GAGAAAATCTAGTTCTGCCTCAGCCCCAGTCAGCAGGCCATCTGTCCCTTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373871.8
ENST00000540618.5
CDS-3UTR CAA 90 bp AAGCCACCTCCTCAACCCAAGACACACCTCACTCCAGATCTACTACTAGAGAGAGTCCATACGTTTGGGTaGCCTGAGGGTAGACAGCAT +
Preference number: 5 (lower is better)
Translates to: KPPPQPKTHLTPDLLLERVHTFG*PEGRQH
Trigger: ATGCTGTCTACCCTCAGGCAACCCAAACGTATGGAC...TCTCTCTAGTAGTAGATCTGGAGTGAGGTGTGTCTTGGGTTGAGGAGGTGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp CCATGGATAAAGACAGAGAGAGAGAGAGAGAGAGAGGCAGAGAGGGAGGGAGAGGTAGTTGCTCAAGTCTaGGCCATTGTCATCAGAAGC +
Preference number: 5 (lower is better)
Translates to: PWIKTEREREREAEREGEVVAQV*AIVIRS
Trigger: GCTTCTGATGACAATGGCCAAGACTTGAGCAACTAC...CTCTCCCTCCCTCTCTGCCTCTCTCTCTCTCTCTCTCTCTGTCTTTATCCATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp CTCTCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGCTGTAGTTGCTCAAGTCTaGGCCATTGTCATCAGAAGC +
Preference number: 5 (lower is better)
Translates to: LSIQLSLLLYGDEHGAAAVVAQV*AIVIRS
Trigger: GCTTCTGATGACAATGGCCAAGACTTGAGCAACTAC...AGCTGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp TCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGCTCACGTAGTTGCTCAAGTCTaGGCCATTGTCATCAGAAGC +
Preference number: 5 (lower is better)
Translates to: SIQLSLLLYGDEHGAAAHVVAQV*AIVIRS
Trigger: GCTTCTGATGACAATGGCCAAGACTTGAGCAACTAC...GTGAGCTGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp GACCAAGAAGGAAGAAGCTGCAGGGACGAGCATCTGATGGGAAATGGGTGCTTCGGCTGGCATTTGTGCTaGAAGCTTGAATGGGATAAG +
Preference number: 5 (lower is better)
Translates to: DQEGRSCRDEHLMGNGCFGWHLC*KLEWDK
Trigger: CTTATCCCATTCAAGCTTCAAGCACAAATGCCAGCC...GAAGCACCCATTTCCCATCAGATGCTCGTCCCTGCAGCTTCTTCCTTCTTGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373871.8
ENST00000436342.6
CDS-3UTR CAA 90 bp CTCTCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGCTGGCTGGCATTTGTGCTaGAAGCTTGAATGGGATAAG +
Preference number: 5 (lower is better)
Translates to: LSIQLSLLLYGDEHGAAAGWHLC*KLEWDK
Trigger: CTTATCCCATTCAAGCTTCAAGCACAAATGCCAGCC...AGCTGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373871.8
ENST00000436342.6
CDS-3UTR CAA 90 bp GACCAAGAAGGAAGAAGCTGCAGGGACGAGCATCTGATGGGAAATGGGTGCTTCCTCCAGAAAGGCATGTaGTGCTGTTTGGCTGCAATT +
Preference number: 5 (lower is better)
Translates to: DQEGRSCRDEHLMGNGCFLQKGM*CCLAAI
Trigger: AATTGCAGCCAAACAGCACAACATGCCTTTCTGGAG...GAAGCACCCATTTCCCATCAGATGCTCGTCCCTGCAGCTTCTTCCTTCTTGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp CCATGGATAAAGACAGAGAGAGAGAGAGAGAGAGAGGCAGAGAGGGAGGGAGAGGCTGCAGTGAGTCCATaGTTCTCTCTATCCAACTGT +
Preference number: 5 (lower is better)
Translates to: PWIKTEREREREAEREGEAAVSP*FSLSNC
Trigger: ACAGTTGGATAGAGAGAACAATGGACTCACTGCAGC...CTCTCCCTCCCTCTCTGCCTCTCTCTCTCTCTCTCTCTCTGTCTTTATCCATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp GTTCTCTCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCATTCCTTCTCTCCAGTTaGGAAGCTAAGCCTCCTGTG +
Preference number: 5 (lower is better)
Translates to: VLSIQLSLLLYGDEHGAAFLLSS*EAKPPV
Trigger: CACAGGAGGCTTAGCTTCCAAACTGGAGAGAAGGAA...TGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp GGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCATGCCCAAATTGCTCTaGGAGGGATGGGGCATCCAA +
Preference number: 5 (lower is better)
Translates to: GKCQSLSYSVSSAPQFTSMPKLL*EGWGIQ
Trigger: TTGGATGCCCCATCCCTCCAAGAGCAATTTGGGCAT...GCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp CCTGGCATTGGAAGGAGTCTTGCCTCTTTGTGCTGCAACATCTCTGGAAATGGGGCATTGGAAGGAGTCTaGCCTCTTTGTGCTGCAACA +
Preference number: 5 (lower is better)
Translates to: PGIGRSLASLCCNISGNGALEGV*PLCAAT
Trigger: TGTTGCAGCACAAAGAGGCAAGACTCCTTCCAATGC...CCCATTTCCAGAGATGTTGCAGCACAAAGAGGCAAGACTCCTTCCAATGCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp GCTCTTCAGTTTCAGGCAGAGATCTGGGTAAATACATACCTGGGACATCCTTCATCTGTGTGTGTGTGCTaGCGTGCATGGTGGGGGTAC +
Preference number: 5 (lower is better)
Translates to: ALQFQAEIWVNTYLGHPSSVCVC*RAWWGY
Trigger: GTACCCCCACCATGCACGCAAGCACACACACACAGA...TGAAGGATGTCCCAGGTATGTATTTACCCAGATCTCTGCCTGAAACTGAAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp GAGGAAGGGACAGATGGCCTGCTGACTGGGGCTGAGGCAGAACTAGATTTTCTCCCTGGACAATTCATTTaGGCAAACAGCCAAGAAGCT +
Preference number: 5 (lower is better)
Translates to: EEGTDGLLTGAEAELDFLPGQFI*ANSQEA
Trigger: AGCTTCTTGGCTGTTTGCCAAAATGAATTGTCCAGG...GAGAAAATCTAGTTCTGCCTCAGCCCCAGTCAGCAGGCCATCTGTCCCTTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp GAGAGCCCTCACCGTGACATTACAGACCCATCCTGTAGAACCCACAGTGCCTGGGGAAGGACTCATCATTaGGCTAATTTCATGAGGACT +
Preference number: 5 (lower is better)
Translates to: ESPHRDITDPSCRTHSAWGRTHH*ANFMRT
Trigger: AGTCCTCATGAAATTAGCCAAATGATGAGTCCTTCC...CCAGGCACTGTGGGTTCTACAGGATGGGTCTGTAATGTCACGGTGAGGGCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp CCATGGATAAAGACAGAGAGAGAGAGAGAGAGAGAGGCAGAGAGGGAGGGAGAGTGTGGCATCAGTCTCTaGGGACAACTCACTAGCTTT +
Preference number: 5 (lower is better)
Translates to: PWIKTEREREREAEREGECGISL*GQLTSF
Trigger: AAAGCTAGTGAGTTGTCCCAAGAGACTGATGCCACA...CTCTCCCTCCCTCTCTGCCTCTCTCTCTCTCTCTCTCTCTGTCTTTATCCATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp GAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCTAGCCAAGGAGCCTTGCTaGCCAGAGCTGTCTGACTCA +
Preference number: 5 (lower is better)
Translates to: EMPKFKLLSVQCPTVHQLAKEPC*PELSDS
Trigger: TGAGTCAGACAGCTCTGGCAAGCAAGGCTCCTTGGC...TAGCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS TCA 90 bp GAACACCCACAGATGAACCATGGCTGCCACTACCTCCTGAGCCACTaGAACCATCTGTTGAGAAACTGTAGTTGCTCAAGTCTTGGCCAT +
Preference number: 5 (lower is better)
Translates to: EHPQMNHGCHYLLSH*NHLLRNCSCSSLGH
Trigger: ATGGCCAAGACTTGAGCAACTACAGTTTCTCAACAGATGGTTTCAGTGGCTCAGGAGGTAGTGGCAGCCATGGTTCATCTGTGGGTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000373863.3
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000471498.5
ENST00000495923.5
ENST00000540618.5
CDS-3UTR CAA 90 bp TCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGCTCACACTTATGTGACTGGATaGCAAGTCTCTCTCAGCAGT +
Preference number: 5 (lower is better)
Translates to: SIQLSLLLYGDEHGAAAHTYVTG*QVSLSS
Trigger: ACTGCTGAGAGAGACTTGCAATCCAGTCACATAAGT...GTGAGCTGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp CCTGGCATTGGAAGGAGTCTTGCCTCTTTGTGCTGCAACATCTCTGGAAATGGGGGTAAGAACACTGTGTaGACTTGGAGATGGAGTCTG +
Preference number: 5 (lower is better)
Translates to: PGIGRSLASLCCNISGNGGKNTV*TWRWSL
Trigger: CAGACTCCATCTCCAAGTCAACACAGTGTTCTTACC...CCCATTTCCAGAGATGTTGCAGCACAAAGAGGCAAGACTCCTTCCAATGCCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373871.8
ENST00000436342.6
CDS-3UTR CAA 90 bp CCTGGCATTGGAAGGAGTCTTGCCTCTTTGTGCTGCAACATCTCTGGAAATGGGGCTGCAGTGAGTCCATaGTTCTCTCTATCCAACTGT +
Preference number: 5 (lower is better)
Translates to: PGIGRSLASLCCNISGNGAAVSP*FSLSNC
Trigger: ACAGTTGGATAGAGAGAACAATGGACTCACTGCAGC...CCCATTTCCAGAGATGTTGCAGCACAAAGAGGCAAGACTCCTTCCAATGCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp ATTAAAAGCACTGTAGCTGCAGTGAGTCCATTGTTCTCTCTATCCAACTGTCCCCTGGGTGGCCTGGCATaGGAAGGAGTCTTGCCTCTT +
Preference number: 5 (lower is better)
Translates to: IKSTVAAVSPLFSLSNCPLGGLA*EGVLPL
Trigger: AAGAGGCAAGACTCCTTCCAATGCCAGGCCACCCAG...GGGACAGTTGGATAGAGAGAACAATGGACTCACTGCAGCTACAGTGCTTTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp GAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCTAAAGAGGGTCTCCCCCTaGATGAATGGACCCACAGTG +
Preference number: 5 (lower is better)
Translates to: EMPKFKLLSVQCPTVHQLKRVSP*MNGPTV
Trigger: CACTGTGGGTCCATTCATCAAGGGGGAGACCCTCTT...TAGCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp ATTAAAAGCACTGTAGCTGCAGTGAGTCCATTGTTCTCTCTATCCAACTGTCCCGCCAAGGAGCCTTGCTaGCCAGAGCTGTCTGACTCA +
Preference number: 5 (lower is better)
Translates to: IKSTVAAVSPLFSLSNCPAKEPC*PELSDS
Trigger: TGAGTCAGACAGCTCTGGCAAGCAAGGCTCCTTGGC...GGGACAGTTGGATAGAGAGAACAATGGACTCACTGCAGCTACAGTGCTTTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp GTTCTCTCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGGTTTGAAGCAAGGCTaGATGTTTCAGGCTTCTGAT +
Preference number: 5 (lower is better)
Translates to: VLSIQLSLLLYGDEHGAAGLKQG*MFQASD
Trigger: ATCAGAAGCCTGAAACATCAAGCCTTGCTTCAAACC...TGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000540618.5
CDS-3UTR CAA 90 bp CCTGGCATTGGAAGGAGTCTTGCCTCTTTGTGCTGCAACATCTCTGGAAATGGGATATCAGGCTGGCATTaGTGCTTGAAGCAAAAGGAG +
Preference number: 5 (lower is better)
Translates to: PGIGRSLASLCCNISGNGISGWH*CLKQKE
Trigger: CTCCTTTTGCTTCAAGCACAAATGCCAGCCTGATAT...CCCATTTCCAGAGATGTTGCAGCACAAAGAGGCAAGACTCCTTCCAATGCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540618.5
CDS-3UTR CAA 90 bp GGGTGGAGAAAAAGGCAGGGTAATTACAGAGAGCACTGTGTTCCCTGGACAATTTGGGATAATCCTGGTTaGAGATGCTGGCTACTGCTG +
Preference number: 5 (lower is better)
Translates to: GWRKRQGNYREHCVPWTIWDNPG*RCWLLL
Trigger: CAGCAGTAGCCAGCATCTCAAACCAGGATTATCCCA...AATTGTCCAGGGAACACAGTGCTCTCTGTAATTACCCTGCCTTTTTCTCCACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp GGGTGGAGAAAAAGGCAGGGTAATTACAGAGAGCACTGTGTTCCCTGGACAATTCTCTTGCCCCGGTTCTaGCTAGTCATGTTTTTCCTG +
Preference number: 5 (lower is better)
Translates to: GWRKRQGNYREHCVPWTILLPRF*LVMFFL
Trigger: CAGGAAAAACATGACTAGCAAGAACCGGGGCAAGAG...AATTGTCCAGGGAACACAGTGCTCTCTGTAATTACCCTGCCTTTTTCTCCACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp GGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCCTCAAGTCTTGGCCATaGTCATCAGAAGCCACATCT +
Preference number: 5 (lower is better)
Translates to: GKCQSLSYSVSSAPQFTSLKSWP*SSEATS
Trigger: AGATGTGGCTTCTGATGACAATGGCCAAGACTTGAG...GCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp CCAGAGGTCGAGAGATGCTCCTGCATTTGGCCCAGGATTAAGTTTTGGGCCATGGAACACTGTGTTGACTaGGAGATGGAGTCTGAATTA +
Preference number: 5 (lower is better)
Translates to: PEVERCSCIWPRIKFWAMEHCVD*EMESEL
Trigger: TAATTCAGACTCCATCTCCAAGTCAACACAGTGTTC...CATGGCCCAAAACTTAATCCTGGGCCAAATGCAGGAGCATCTCTCGACCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373871.8
ENST00000436342.6
CDS-3UTR CAA 90 bp GAGGACTCTAATGAAGAGGGTCTCCCCCTTGATGAATGGACCCACAGTGTCCTTGGCATGTTGTGCTGTTaGGCTGCAATTTCTTCATCT +
Preference number: 5 (lower is better)
Translates to: EDSNEEGLPLDEWTHSVLGMLCC*AAISSS
Trigger: AGATGAAGAAATTGCAGCCAAACAGCACAACATGCC...AAGGACACTGTGGGTCCATTCATCAAGGGGGAGACCCTCTTCATTAGAGTCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp GGGTGGAGAAAAAGGCAGGGTAATTACAGAGAGCACTGTGTTCCCTGGACAATTGCATTGGAAGGAGTCTaGCCTCTTTGTGCTGCAACA +
Preference number: 5 (lower is better)
Translates to: GWRKRQGNYREHCVPWTIALEGV*PLCAAT
Trigger: TGTTGCAGCACAAAGAGGCAAGACTCCTTCCAATGC...AATTGTCCAGGGAACACAGTGCTCTCTGTAATTACCCTGCCTTTTTCTCCACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp CCATGGATAAAGACAGAGAGAGAGAGAGAGAGAGAGGCAGAGAGGGAGGGAGAGGGAAGGACTCATCATTaGGCTAATTTCATGAGGACT +
Preference number: 5 (lower is better)
Translates to: PWIKTEREREREAEREGEGRTHH*ANFMRT
Trigger: AGTCCTCATGAAATTAGCCAAATGATGAGTCCTTCC...CTCTCCCTCCCTCTCTGCCTCTCTCTCTCTCTCTCTCTCTGTCTTTATCCATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp AAGCCACCTCCTCAACCCAAGACACACCTCACTCCAGATCTACTACTAGAGAGAACTTATGTGACTGGATaGCAAGTCTCTCTCAGCAGT +
Preference number: 5 (lower is better)
Translates to: KPPPQPKTHLTPDLLLERTYVTG*QVSLSS
Trigger: ACTGCTGAGAGAGACTTGCAATCCAGTCACATAAGT...TCTCTCTAGTAGTAGATCTGGAGTGAGGTGTGTCTTGGGTTGAGGAGGTGGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp CCTGGCATTGGAAGGAGTCTTGCCTCTTTGTGCTGCAACATCTCTGGAAATGGGGCTGCTGCTGGAATATaGGCAATTGTAGAAGAAGTA +
Preference number: 5 (lower is better)
Translates to: PGIGRSLASLCCNISGNGAAAGI*AIVEEV
Trigger: TACTTCTTCTACAATTGCCAATATTCCAGCAGCAGC...CCCATTTCCAGAGATGTTGCAGCACAAAGAGGCAAGACTCCTTCCAATGCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp GTTCTCTCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGCTGCTGCTGGAATATaGGCAATTGTAGAAGAAGTA +
Preference number: 5 (lower is better)
Translates to: VLSIQLSLLLYGDEHGAAAAAGI*AIVEEV
Trigger: TACTTCTTCTACAATTGCCAATATTCCAGCAGCAGC...TGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp AGATGGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACTGGGATAATCCTGGTTaGAGATGCTGGCTACTGCTG +
Preference number: 5 (lower is better)
Translates to: RWEMPKFKLLSVQCPTVHWDNPG*RCWLLL
Trigger: CAGCAGTAGCCAGCATCTCAAACCAGGATTATCCCA...GTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp GTTCTCTCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAAGCCAATCACTACTGTaGGGTCCTTTCCATATTTCT +
Preference number: 5 (lower is better)
Translates to: VLSIQLSLLLYGDEHGAASQSLL*GPFHIS
Trigger: AGAAATATGGAAAGGACCCAACAGTAGTGATTGGCT...TGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGAGAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp TCTATCCAACTGTCCCTGCTTCTGTATGGAGATGAACACGGGGCTGCAGCTCACCTTTCTTTCCAAACCTaGACACAATTCTCTCAAAGC +
Preference number: 5 (lower is better)
Translates to: SIQLSLLLYGDEHGAAAHLSFQT*TQFSQS
Trigger: GCTTTGAGAGAATTGTGTCAAGGTTTGGAAAGAAAG...GTGAGCTGCAGCCCCGTGTTCATCTCCATACAGAAGCAGGGACAGTTGGATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp GGGTGGAGAAAAAGGCAGGGTAATTACAGAGAGCACTGTGTTCCCTGGACAATTCTCCAGAAAGGCATGTaGTGCTGTTTGGCTGCAATT +
Preference number: 5 (lower is better)
Translates to: GWRKRQGNYREHCVPWTILQKGM*CCLAAI
Trigger: AATTGCAGCCAAACAGCACAACATGCCTTTCTGGAG...AATTGTCCAGGGAACACAGTGCTCTCTGTAATTACCCTGCCTTTTTCTCCACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp TATAACATTACGGTCACGGATTCTACAGCCACAAATGCCCGCAGTCACATAAATTACAATCCCAACACTTaGAGAGGCCGAGGTGGGAGG +
Preference number: 5 (lower is better)
Translates to: YNITVTDSTATNARSHINYNPNT*RGRGGR
Trigger: CCTCCCACCTCGGCCTCTCAAAGTGTTGGGATTGTA...ATTTATGTGACTGCGGGCATTTGTGGCTGTAGAATCCGTGACCGTAATGTTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp AAAGGGACTGGAAAGAAGACTAAGGCTTCTAGATGGGAAATGCCAAAGTTTAAGTCTGTGTGTGTGTGCTaGCGTGCATGGTGGGGGTAC +
Preference number: 5 (lower is better)
Translates to: KGTGKKTKASRWEMPKFKSVCVC*RAWWGY
Trigger: GTACCCCCACCATGCACGCAAGCACACACACACAGA...CTTAAACTTTGGCATTTCCCATCTAGAAGCCTTAGTCTTCTTTCCAGTCCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp AAGCCACCTCCTCAACCCAAGACACACCTCACTCCAGATCTACTACTAGAGAGACCTGGACAATTCATTTaGGCAAACAGCCAAGAAGCT +
Preference number: 5 (lower is better)
Translates to: KPPPQPKTHLTPDLLLERPGQFI*ANSQEA
Trigger: AGCTTCTTGGCTGTTTGCCAAAATGAATTGTCCAGG...TCTCTCTAGTAGTAGATCTGGAGTGAGGTGTGTCTTGGGTTGAGGAGGTGGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp GAGGAAGGGACAGATGGCCTGCTGACTGGGGCTGAGGCAGAACTAGATTTTCTCATTTTAAAGCTGAGTTaGTGTAAACTGCGAACAAGC +
Preference number: 5 (lower is better)
Translates to: EEGTDGLLTGAEAELDFLILKLS*CKLRTS
Trigger: GCTTGTTCGCAGTTTACACAAACTCAGCTTTAAAAT...GAGAAAATCTAGTTCTGCCTCAGCCCCAGTCAGCAGGCCATCTGTCCCTTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp GACCAAGAAGGAAGAAGCTGCAGGGACGAGCATCTGATGGGAAATGGGTGCTTCTATGTGCATAAGGTTTaGCAGAATACATTTGTGAGG +
Preference number: 5 (lower is better)
Translates to: DQEGRSCRDEHLMGNGCFYVHKV*QNTFVR
Trigger: CCTCACAAATGTATTCTGCAAAACCTTATGCACATA...GAAGCACCCATTTCCCATCAGATGCTCGTCCCTGCAGCTTCTTCCTTCTTGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp CCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGAGCATCAGCTTTCCTCTaGCCCCGGTTCTTGCTAGTC +
Preference number: 5 (lower is better)
Translates to: PASKIRPLPIKITYTFAGASAFL*PRFLLV
Trigger: GACTAGCAAGAACCGGGGCAAGAGGAAAGCTGATGC...TCCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp AAAGGGACTGGAAAGAAGACTAAGGCTTCTAGATGGGAAATGCCAAAGTTTAAGGCATCAGCTTTCCTCTaGCCCCGGTTCTTGCTAGTC +
Preference number: 5 (lower is better)
Translates to: KGTGKKTKASRWEMPKFKASAFL*PRFLLV
Trigger: GACTAGCAAGAACCGGGGCAAGAGGAAAGCTGATGC...CTTAAACTTTGGCATTTCCCATCTAGAAGCCTTAGTCTTCTTTCCAGTCCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp GGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCAGCCAATCACTACTGTaGGGTCCTTTCCATATTTCT +
Preference number: 5 (lower is better)
Translates to: GKCQSLSYSVSSAPQFTSSQSLL*GPFHIS
Trigger: AGAAATATGGAAAGGACCCAACAGTAGTGATTGGCT...GCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp AGATGGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCTCAAGTCTTGGCCATaGTCATCAGAAGCCACATCT +
Preference number: 5 (lower is better)
Translates to: RWEMPKFKLLSVQCPTVHLKSWP*SSEATS
Trigger: AGATGTGGCTTCTGATGACAATGGCCAAGACTTGAG...GTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp GGGTGGAGAAAAAGGCAGGGTAATTACAGAGAGCACTGTGTTCCCTGGACAATTATATCAGGCTGGCATTaGTGCTTGAAGCTTGAATGG +
Preference number: 5 (lower is better)
Translates to: GWRKRQGNYREHCVPWTIISGWH*CLKLEW
Trigger: CCATTCAAGCTTCAAGCACAAATGCCAGCCTGATAT...AATTGTCCAGGGAACACAGTGCTCTCTGTAATTACCCTGCCTTTTTCTCCACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373871.8
ENST00000436342.6
CDS-3UTR CAA 90 bp GGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCCAAAAATTGCAGCTGTaGGTTCTGATTGTGTTCTCG +
Preference number: 5 (lower is better)
Translates to: GKCQSLSYSVSSAPQFTSQKLQL*VLIVFS
Trigger: CGAGAACACAATCAGAACCAACAGCTGCAATTTTTG...GCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp GAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCTAGCTGCAGTGAGTCCATaGTTCTCTCTATCCAACTGT +
Preference number: 5 (lower is better)
Translates to: EMPKFKLLSVQCPTVHQLAAVSP*FSLSNC
Trigger: ACAGTTGGATAGAGAGAACAATGGACTCACTGCAGC...TAGCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp TTACATTCTAAAATAAAGAGCTCCCAAAAGGGTGGAGAGGGAAGTATCTGTGTGTACAATCCCAACACTTaGAGAGGCCGAGGTGGGAGG +
Preference number: 5 (lower is better)
Translates to: LHSKIKSSQKGGEGSICVYNPNT*RGRGGR
Trigger: CCTCCCACCTCGGCCTCTCAAAGTGTTGGGATTGTA...CACACAGATACTTCCCTCTCCACCCTTTTGGGAGCTCTTTATTTTAGAATGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp TATAACATTACGGTCACGGATTCTACAGCCACAAATGCCCGCAGTCACATAAATATGCCCAAATTGCTCTaGGAGGGATGGGGCATCCAA +
Preference number: 5 (lower is better)
Translates to: YNITVTDSTATNARSHINMPKLL*EGWGIQ
Trigger: TTGGATGCCCCATCCCTCCAAGAGCAATTTGGGCAT...ATTTATGTGACTGCGGGCATTTGTGGCTGTAGAATCCGTGACCGTAATGTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp AAGGGACTGGAAAGAAGACTAAGGCTTCTAGATGGGAAATGCCAAAGTTTAAGTAAGAGGGTCTCCCCCTaGATGAATGGACCCACAGTG +
Preference number: 5 (lower is better)
Translates to: KGLERRLRLLDGKCQSLSKRVSP*MNGPTV
Trigger: CACTGTGGGTCCATTCATCAAGGGGGAGACCCTCTT...ACTTAAACTTTGGCATTTCCCATCTAGAAGCCTTAGTCTTCTTTCCAGTCCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp GCTCTTCAGTTTCAGGCAGAGATCTGGGTAAATACATACCTGGGACATCCTTCATGTGGCATCAGTCTCTaGGGACAACTCACTAGCTTT +
Preference number: 5 (lower is better)
Translates to: ALQFQAEIWVNTYLGHPSCGISL*GQLTSF
Trigger: AAAGCTAGTGAGTTGTCCCAAGAGACTGATGCCACA...TGAAGGATGTCCCAGGTATGTATTTACCCAGATCTCTGCCTGAAACTGAAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp TATAACATTACGGTCACGGATTCTACAGCCACAAATGCCCGCAGTCACATAAATACCCTAACTGCCTCCTaGAGGAGTAAGGAGTCAGAG +
Preference number: 5 (lower is better)
Translates to: YNITVTDSTATNARSHINTLTAS*RSKESE
Trigger: CTCTGACTCCTTACTCCTCAAGGAGGCAGTTAGGGT...ATTTATGTGACTGCGGGCATTTGTGGCTGTAGAATCCGTGACCGTAATGTTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp GGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCATATCAGGCTGGCATTaGTGCTTGAAGTTTGCAGAA +
Preference number: 5 (lower is better)
Translates to: GKCQSLSYSVSSAPQFTSISGWH*CLKFAE
Trigger: TTCTGCAAACTTCAAGCACAAATGCCAGCCTGATAT...GCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373864.5
CDS-3UTR CAA 90 bp GAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCTACTGACATGGGAAGGTTaGAAGCAAGGCTTGATGTTT +
Preference number: 5 (lower is better)
Translates to: EMPKFKLLSVQCPTVHQLLTWEG*KQGLMF
Trigger: AAACATCAAGCCTTGCTTCAAACCTTCCCATGTCAG...TAGCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000540618.5
CDS-3UTR CAA 90 bp TTACATTCTAAAATAAAGAGCTCCCAAAAGGGTGGAGAGGGAAGTATCTGTGTGGTCCATACGTTTGGGTaGCCTGAGGGTAGACAGCAT +
Preference number: 5 (lower is better)
Translates to: LHSKIKSSQKGGEGSICVVHTFG*PEGRQH
Trigger: ATGCTGTCTACCCTCAGGCAACCCAAACGTATGGAC...CACACAGATACTTCCCTCTCCACCCTTTTGGGAGCTCTTTATTTTAGAATGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp GGGAAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCATCAGCTTTCCTCTaGCCCCGGTTCTTGCTAGTC +
Preference number: 5 (lower is better)
Translates to: GKPASKIRPLPIKITYTFASAFL*PRFLLV
Trigger: GACTAGCAAGAACCGGGGCAAGAGGAAAGCTGATGC...GAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp AAGCCACCTCCTCAACCCAAGACACACCTCACTCCAGATCTACTACTAGAGAGACTTTCTTTCCAAACCTaGACACAATTCTCTCAAAGC +
Preference number: 5 (lower is better)
Translates to: KPPPQPKTHLTPDLLLERLSFQT*TQFSQS
Trigger: GCTTTGAGAGAATTGTGTCAAGGTTTGGAAAGAAAG...TCTCTCTAGTAGTAGATCTGGAGTGAGGTGTGTCTTGGGTTGAGGAGGTGGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp GCTCTTCAGTTTCAGGCAGAGATCTGGGTAAATACATACCTGGGACATCCTTCAATATCAGGCTGGCATTaGTGCTTGAAGCTTGAATGG +
Preference number: 5 (lower is better)
Translates to: ALQFQAEIWVNTYLGHPSISGWH*CLKLEW
Trigger: CCATTCAAGCTTCAAGCACAAATGCCAGCCTGATAT...TGAAGGATGTCCCAGGTATGTATTTACCCAGATCTCTGCCTGAAACTGAAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373871.8
ENST00000436342.6
CDS-3UTR CAA 90 bp TATAACATTACGGTCACGGATTCTACAGCCACAAATGCCCGCAGTCACATAAATTTCCTTCTCTCCAGTTaGGAAGCTAAGCCTCCTGTG +
Preference number: 5 (lower is better)
Translates to: YNITVTDSTATNARSHINFLLSS*EAKPPV
Trigger: CACAGGAGGCTTAGCTTCCAAACTGGAGAGAAGGAA...ATTTATGTGACTGCGGGCATTTGTGGCTGTAGAATCCGTGACCGTAATGTTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp CCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGATGGGATAATCCTGGTTaGAGATGCTGGCTACTGCTG +
Preference number: 5 (lower is better)
Translates to: PASKIRPLPIKITYTFAGWDNPG*RCWLLL
Trigger: CAGCAGTAGCCAGCATCTCAAACCAGGATTATCCCA...TCCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp CCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGACTCTTGCCCCGGTTCTaGCTAGTCATGTTTTTCCTG +
Preference number: 5 (lower is better)
Translates to: PASKIRPLPIKITYTFAGLLPRF*LVMFFL
Trigger: CAGGAAAAACATGACTAGCAAGAACCGGGGCAAGAG...TCCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp TTACATTCTAAAATAAAGAGCTCCCAAAAGGGTGGAGAGGGAAGTATCTGTGTGCTCTTGCCCCGGTTCTaGCTAGTCATGTTTTTCCTG +
Preference number: 5 (lower is better)
Translates to: LHSKIKSSQKGGEGSICVLLPRF*LVMFFL
Trigger: CAGGAAAAACATGACTAGCAAGAACCGGGGCAAGAG...CACACAGATACTTCCCTCTCCACCCTTTTGGGAGCTCTTTATTTTAGAATGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp ATTAAAAGCACTGTAGCTGCAGTGAGTCCATTGTTCTCTCTATCCAACTGTCCCGGCATGTTGTGCTGTTaGGCTGCAATTTCTTCATCT +
Preference number: 5 (lower is better)
Translates to: IKSTVAAVSPLFSLSNCPGMLCC*AAISSS
Trigger: AGATGAAGAAATTGCAGCCAAACAGCACAACATGCC...GGGACAGTTGGATAGAGAGAACAATGGACTCACTGCAGCTACAGTGCTTTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp TCTACAGCCACAAATGCCCGCAGTCACATAAATATATCCAATCCAATCAATGCCGCTGCAGTGAGTCCATaGTTCTCTCTATCCAACTGT +
Preference number: 5 (lower is better)
Translates to: STATNARSHINISNPINAAAVSP*FSLSNC
Trigger: ACAGTTGGATAGAGAGAACAATGGACTCACTGCAGC...GGCATTGATTGGATTGGATATATTTATGTGACTGCGGGCATTTGTGGCTGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp GAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCAGCTAAAGGAGTTTTTAGGGTaGTGCCATTTGACTAAAGGG +
Preference number: 5 (lower is better)
Translates to: EMPKFKLLSVQCPTVHQLKEFLG*CHLTKG
Trigger: CCCTTTAGTCAAATGGCACAACCCTAAAAACTCCTT...TAGCTGGTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp AAGGGACTGGAAAGAAGACTAAGGCTTCTAGATGGGAAATGCCAAAGTTTAAGTTTCCTTCTCTCCAGTTaGGAAGCTAAGCCTCCTGTG +
Preference number: 5 (lower is better)
Translates to: KGLERRLRLLDGKCQSLSFLLSS*EAKPPV
Trigger: CACAGGAGGCTTAGCTTCCAAACTGGAGAGAAGGAA...ACTTAAACTTTGGCATTTCCCATCTAGAAGCCTTAGTCTTCTTTCCAGTCCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp GGGTGGAGAAAAAGGCAGGGTAATTACAGAGAGCACTGTGTTCCCTGGACAATTAAGTTCAAGTTCCTTTaGGAAAGAGCTAAGCTAGGA +
Preference number: 5 (lower is better)
Translates to: GWRKRQGNYREHCVPWTIKFKFL*ERAKLG
Trigger: TCCTAGCTTAGCTCTTTCCAAAAGGAACTTGAACTT...AATTGTCCAGGGAACACAGTGCTCTCTGTAATTACCCTGCCTTTTTCTCCACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp GCTCTTCAGTTTCAGGCAGAGATCTGGGTAAATACATACCTGGGACATCCTTCAGGAAGGACTCATCATTaGGCTAATTTCATGAGGACT +
Preference number: 5 (lower is better)
Translates to: ALQFQAEIWVNTYLGHPSGRTHH*ANFMRT
Trigger: AGTCCTCATGAAATTAGCCAAATGATGAGTCCTTCC...TGAAGGATGTCCCAGGTATGTATTTACCCAGATCTCTGCCTGAAACTGAAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp GGGAAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCACCCTAACTGCCTCCTaGAGGAGTAAGGAGTCAGAG +
Preference number: 5 (lower is better)
Translates to: GKPASKIRPLPIKITYTFTLTAS*RSKESE
Trigger: CTCTGACTCCTTACTCCTCAAGGAGGCAGTTAGGGT...GAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp GGGAAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCCTCTTGCCCCGGTTCTaGCTAGTCATGTTTTTCCTG +
Preference number: 5 (lower is better)
Translates to: GKPASKIRPLPIKITYTFLLPRF*LVMFFL
Trigger: CAGGAAAAACATGACTAGCAAGAACCGGGGCAAGAG...GAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp TTACATTCTAAAATAAAGAGCTCCCAAAAGGGTGGAGAGGGAAGTATCTGTGTGCTCAAGTCTTGGCCATaGTCATCAGAAGCCACATCT +
Preference number: 5 (lower is better)
Translates to: LHSKIKSSQKGGEGSICVLKSWP*SSEATS
Trigger: AGATGTGGCTTCTGATGACAATGGCCAAGACTTGAG...CACACAGATACTTCCCTCTCCACCCTTTTGGGAGCTCTTTATTTTAGAATGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp AGATGGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACCTTTCTTTCCAAACCTaGACACAATTCTCTCAAAGC +
Preference number: 5 (lower is better)
Translates to: RWEMPKFKLLSVQCPTVHLSFQT*TQFSQS
Trigger: GCTTTGAGAGAATTGTGTCAAGGTTTGGAAAGAAAG...GTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp ACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGGGTAAGAACACTGTGTaGACTTGGAGATGGAGTCTG +
Preference number: 5 (lower is better)
Translates to: TCVKDQTLTYKNNIHIRWGKNTV*TWRWSL
Trigger: CAGACTCCATCTCCAAGTCAACACAGTGTTCTTACC...CCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373871.8
ENST00000436342.6
CDS-3UTR CAA 90 bp ACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGCTCCAGAAAGGCATGTaGTGCTGTTTGGCTGCAATT +
Preference number: 5 (lower is better)
Translates to: TCVKDQTLTYKNNIHIRWLQKGM*CCLAAI
Trigger: AATTGCAGCCAAACAGCACAACATGCCTTTCTGGAG...CCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp TATAACATTACGGTCACGGATTCTACAGCCACAAATGCCCGCAGTCACATAAATCCTGGACAATTCATTTaGGCAAACAGCCAAGAAGCT +
Preference number: 5 (lower is better)
Translates to: YNITVTDSTATNARSHINPGQFI*ANSQEA
Trigger: AGCTTCTTGGCTGTTTGCCAAAATGAATTGTCCAGG...ATTTATGTGACTGCGGGCATTTGTGGCTGTAGAATCCGTGACCGTAATGTTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp ACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGTGTGGCATCAGTCTCTaGGGACAACTCACTAGCTTT +
Preference number: 5 (lower is better)
Translates to: TCVKDQTLTYKNNIHIRWCGISL*GQLTSF
Trigger: AAAGCTAGTGAGTTGTCCCAAGAGACTGATGCCACA...CCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp GGGTGGAGAAAAAGGCAGGGTAATTACAGAGAGCACTGTGTTCCCTGGACAATTATTTTAAAGCTGAGTTaGTGTAAACTGCGAACAAGC +
Preference number: 5 (lower is better)
Translates to: GWRKRQGNYREHCVPWTIILKLS*CKLRTS
Trigger: GCTTGTTCGCAGTTTACACAAACTCAGCTTTAAAAT...AATTGTCCAGGGAACACAGTGCTCTCTGTAATTACCCTGCCTTTTTCTCCACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp AAAGGGACTGGAAAGAAGACTAAGGCTTCTAGATGGGAAATGCCAAAGTTTAAGACTTATGTGACTGGATaGCAAGTCTCTCTCAGCAGT +
Preference number: 5 (lower is better)
Translates to: KGTGKKTKASRWEMPKFKTYVTG*QVSLSS
Trigger: ACTGCTGAGAGAGACTTGCAATCCAGTCACATAAGT...CTTAAACTTTGGCATTTCCCATCTAGAAGCCTTAGTCTTCTTTCCAGTCCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp AAGGGACTGGAAAGAAGACTAAGGCTTCTAGATGGGAAATGCCAAAGTTTAAGTACTTATGTGACTGGATaGCAAGTCTCTCTCAGCAGT +
Preference number: 5 (lower is better)
Translates to: KGLERRLRLLDGKCQSLSTYVTG*QVSLSS
Trigger: ACTGCTGAGAGAGACTTGCAATCCAGTCACATAAGT...ACTTAAACTTTGGCATTTCCCATCTAGAAGCCTTAGTCTTCTTTCCAGTCCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp ATTAAAAGCACTGTAGCTGCAGTGAGTCCATTGTTCTCTCTATCCAACTGTCCCATCTGGATTGCTTACTaGACTTATAGTTTGCTCTCC +
Preference number: 5 (lower is better)
Translates to: IKSTVAAVSPLFSLSNCPIWIAY*TYSLLS
Trigger: GGAGAGCAAACTATAAGTCAAGTAAGCAATCCAGAT...GGGACAGTTGGATAGAGAGAACAATGGACTCACTGCAGCTACAGTGCTTTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373871.8
ENST00000540618.5
CDS-3UTR CAA 90 bp ACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGGGTTTGAAGCAAGGCTaGATGTTTCAGGCTTCTGAT +
Preference number: 5 (lower is better)
Translates to: TCVKDQTLTYKNNIHIRWGLKQG*MFQASD
Trigger: ATCAGAAGCCTGAAACATCAAGCCTTGCTTCAAACC...CCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000540618.5
CDS-3UTR CAA 90 bp AAAGGGACTGGAAAGAAGACTAAGGCTTCTAGATGGGAAATGCCAAAGTTTAAGCTGACATGGGAAGGTTaGAAGCAAGGCTTGATGTTT +
Preference number: 5 (lower is better)
Translates to: KGTGKKTKASRWEMPKFKLTWEG*KQGLMF
Trigger: AAACATCAAGCCTTGCTTCAAACCTTCCCATGTCAG...CTTAAACTTTGGCATTTCCCATCTAGAAGCCTTAGTCTTCTTTCCAGTCCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000540618.5
CDS-3UTR CAA 90 bp AGATGGGAAATGCCAAAGTTTAAGTTACTCAGTGTCCAGTGCCCCACAGTTCACTATGTGCATAAGGTTTaGCAGAATACATTTGTGAGG +
Preference number: 5 (lower is better)
Translates to: RWEMPKFKLLSVQCPTVHYVHKV*QNTFVR
Trigger: CCTCACAAATGTATTCTGCAAAACCTTATGCACATA...GTGAACTGTGGGGCACTGGACACTGAGTAACTTAAACTTTGGCATTTCCCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp AAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTTGGGATAATCCTGGTTaGAGATGCTGGCTACTGCTG +
Preference number: 5 (lower is better)
Translates to: KPASKIRPLPIKITYTFAWDNPG*RCWLLL
Trigger: CAGCAGTAGCCAGCATCTCAAACCAGGATTATCCCA...AGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp GGGAAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCCTCAAGTCTTGGCCATaGTCATCAGAAGCCACATCT +
Preference number: 5 (lower is better)
Translates to: GKPASKIRPLPIKITYTFLKSWP*SSEATS
Trigger: AGATGTGGCTTCTGATGACAATGGCCAAGACTTGAG...GAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp AAAGGGACTGGAAAGAAGACTAAGGCTTCTAGATGGGAAATGCCAAAGTTTAAGGGCATGTTGTGCTGTTaGGCTGCAATTTCTTCATCT +
Preference number: 5 (lower is better)
Translates to: KGTGKKTKASRWEMPKFKGMLCC*AAISSS
Trigger: AGATGAAGAAATTGCAGCCAAACAGCACAACATGCC...CTTAAACTTTGGCATTTCCCATCTAGAAGCCTTAGTCTTCTTTCCAGTCCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp TATAACATTACGGTCACGGATTCTACAGCCACAAATGCCCGCAGTCACATAAATAAGGAGTTTTTAGGGTaGTGCCATTTGACTAAAGGG +
Preference number: 5 (lower is better)
Translates to: YNITVTDSTATNARSHINKEFLG*CHLTKG
Trigger: CCCTTTAGTCAAATGGCACAACCCTAAAAACTCCTT...ATTTATGTGACTGCGGGCATTTGTGGCTGTAGAATCCGTGACCGTAATGTTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp AAGGGACTGGAAAGAAGACTAAGGCTTCTAGATGGGAAATGCCAAAGTTTAAGTCTCAATCTGAGGTGCTaGTATCATCTCTCTCTGTGT +
Preference number: 5 (lower is better)
Translates to: KGLERRLRLLDGKCQSLSLNLRC*YHLSLC
Trigger: ACACAGAGAGAGATGATACAAGCACCTCAGATTGAG...ACTTAAACTTTGGCATTTCCCATCTAGAAGCCTTAGTCTTCTTTCCAGTCCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp AAAGGGACTGGAAAGAAGACTAAGGCTTCTAGATGGGAAATGCCAAAGTTTAAGCTCAATCTGAGGTGCTaGTATCATCTCTCTCTGTGT +
Preference number: 5 (lower is better)
Translates to: KGTGKKTKASRWEMPKFKLNLRC*YHLSLC
Trigger: ACACAGAGAGAGATGATACAAGCACCTCAGATTGAG...CTTAAACTTTGGCATTTCCCATCTAGAAGCCTTAGTCTTCTTTCCAGTCCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp AAAGGGACTGGAAAGAAGACTAAGGCTTCTAGATGGGAAATGCCAAAGTTTAAGAGCCAATCACTACTGTaGGGTCCTTTCCATATTTCT +
Preference number: 5 (lower is better)
Translates to: KGTGKKTKASRWEMPKFKSQSLL*GPFHIS
Trigger: AGAAATATGGAAAGGACCCAACAGTAGTGATTGGCT...CTTAAACTTTGGCATTTCCCATCTAGAAGCCTTAGTCTTCTTTCCAGTCCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp ACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGCAAAAATTGCAGCTGTaGGTTCTGATTGTGTTCTCG +
Preference number: 5 (lower is better)
Translates to: TCVKDQTLTYKNNIHIRWQKLQL*VLIVFS
Trigger: CGAGAACACAATCAGAACCAACAGCTGCAATTTTTG...CCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp AAGGGACTGGAAAGAAGACTAAGGCTTCTAGATGGGAAATGCCAAAGTTTAAGTAAGGAGTTTTTAGGGTaGTGCCATTTGACTAAAGGG +
Preference number: 5 (lower is better)
Translates to: KGLERRLRLLDGKCQSLSKEFLG*CHLTKG
Trigger: CCCTTTAGTCAAATGGCACAACCCTAAAAACTCCTT...ACTTAAACTTTGGCATTTCCCATCTAGAAGCCTTAGTCTTCTTTCCAGTCCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp GGGAAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCCTCAATCTGAGGTGCTaGTATCATCTCTCTCTGTGT +
Preference number: 5 (lower is better)
Translates to: GKPASKIRPLPIKITYTFLNLRC*YHLSLC
Trigger: ACACAGAGAGAGATGATACAAGCACCTCAGATTGAG...GAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp TATAACATTACGGTCACGGATTCTACAGCCACAAATGCCCGCAGTCACATAAATAAGTTCAAGTTCCTTTaGGAAAGAGCTAAGCTAGGA +
Preference number: 5 (lower is better)
Translates to: YNITVTDSTATNARSHINKFKFL*ERAKLG
Trigger: TCCTAGCTTAGCTCTTTCCAAAAGGAACTTGAACTT...ATTTATGTGACTGCGGGCATTTGTGGCTGTAGAATCCGTGACCGTAATGTTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp GAAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCGCTGCTGCTGGAATATaGGCAATTGTAGAAGAAGTA +
Preference number: 5 (lower is better)
Translates to: ETCVKDQTLTYKNNIHIRAAAGI*AIVEEV
Trigger: TACTTCTTCTACAATTGCCAATATTCCAGCAGCAGC...GCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp GAAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCAGCCAATCACTACTGTaGGGTCCTTTCCATATTTCT +
Preference number: 5 (lower is better)
Translates to: ETCVKDQTLTYKNNIHIRSQSLL*GPFHIS
Trigger: AGAAATATGGAAAGGACCCAACAGTAGTGATTGGCT...GCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp GAAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCGAACACTGTGTTGACTaGGAGATGGAGTCTGAATTA +
Preference number: 5 (lower is better)
Translates to: ETCVKDQTLTYKNNIHIREHCVD*EMESEL
Trigger: TAATTCAGACTCCATCTCCAAGTCAACACAGTGTTC...GCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373871.8
ENST00000436342.6
CDS-3UTR CAA 90 bp CCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGGAAAGTTCAAGTTCCTTTaGGAAAGAGCTAAGCTAGGA +
Preference number: 5 (lower is better)
Translates to: PASKIRPLPIKITYTFAGKFKFL*ERAKLG
Trigger: TCCTAGCTTAGCTCTTTCCAAAAGGAACTTGAACTT...TCCAGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp AAAGGGACTGGAAAGAAGACTAAGGCTTCTAGATGGGAAATGCCAAAGTTTAAGTATGTGCATAAGGTTTaGCAGAATACATTTGTGAGG +
Preference number: 5 (lower is better)
Translates to: KGTGKKTKASRWEMPKFKYVHKV*QNTFVR
Trigger: CCTCACAAATGTATTCTGCAAAACCTTATGCACATA...CTTAAACTTTGGCATTTCCCATCTAGAAGCCTTAGTCTTCTTTCCAGTCCCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp AAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTGCTGCTGCTGGAATATaGGCAATTGTAGAAGAAGTA +
Preference number: 5 (lower is better)
Translates to: KPASKIRPLPIKITYTFAAAAGI*AIVEEV
Trigger: TACTTCTTCTACAATTGCCAATATTCCAGCAGCAGC...AGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp GGGAAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCCTTTCTTTCCAAACCTaGACACAATTCTCTCAAAGC +
Preference number: 5 (lower is better)
Translates to: GKPASKIRPLPIKITYTFLSFQT*TQFSQS
Trigger: GCTTTGAGAGAATTGTGTCAAGGTTTGGAAAGAAAG...GAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTTCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp AAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCTAAGGAGTTTTTAGGGTaGTGCCATTTGACTAAAGGG +
Preference number: 5 (lower is better)
Translates to: KPASKIRPLPIKITYTFAKEFLG*CHLTKG
Trigger: CCCTTTAGTCAAATGGCACAACCCTAAAAACTCCTT...AGCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS-3UTR CAA 90 bp GAAACCTGCGTCAAAGATCAGACCCTTACCTATAAAAATAACATACACATTCGCATTTTAAAGCTGAGTTaGTGTAAACTGCGAACAAGC +
Preference number: 5 (lower is better)
Translates to: ETCVKDQTLTYKNNIHIRILKLS*CKLRTS
Trigger: GCTTGTTCGCAGTTTACACAAACTCAGCTTTAAAAT...GCGAATGTGTATGTTATTTTTATAGGTAAGGGTCTGATCTTTGACGCAGGTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000540618.5
CDS TCA 90 bp ATTGCTTACTTGATGGTTGCTCTGGTAAATCTTGCTCTTCTTCCATaGGGACCAATATTTCTTTATTATACTTATGTGACTGGATTGCAA +
Preference number: 5 (lower is better)
Translates to: IAYLMVALVNLALLP*GPIFLYYTYVTGLQ
Trigger: TTGCAATCCAGTCACATAAGTATAATAAAGAAATATTGGTCCTCATGGAAGAAGAGCAAGATTTACCAGAGCAACCATCAAGTAAGCAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373864.5
CDS GCA 72 bp AGAAGGGTCTCCAGAGGAAAGTCTCTGTGCTGCAGGTaGAGGCGCCATGACACTAGGCTTCTCCGACTGGTA +
Preference number: 6 (lower is better)
Translates to: RRVSRGKSLCCR*RRHDTRLLRLV
Trigger: TACCAGTCGGAGAAGCCTAGTGTCATGGCGCCTGCACCTGCAGCACAGAGACTTTCCTCTGGAGACCCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000373863.3
ENST00000373871.8
ENST00000436342.6
ENST00000468665.1
ENST00000471498.5
ENST00000540618.5
CDS CCA 72 bp GCAGGTGCAGGCGCCATGACACTAGGCTTCTCCGACTaGTATGTGGTTGCTGCTAATGTGGTGCTCTCTGCA +
Preference number: 6 (lower is better)
Translates to: AGAGAMTLGFSD*YVVAANVVLSA
Trigger: TGCAGAGAGCACCACATTAGCAGCAACCACATACCAGTCGGAGAAGCCTAGTGTCATGGCGCCTGCACCTGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000373863.3
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000468665.1
ENST00000471498.5
ENST00000540618.5
CDS GCA 72 bp ACTTGTAGAAGGGTCTCCAGAGGAAAGTCTCTGTGCTaGAGGTGCAGGCGCCATGACACTAGGCTTCTCCGA +
Preference number: 6 (lower is better)
Translates to: TCRRVSRGKSLC*RCRRHDTRLLR
Trigger: TCGGAGAAGCCTAGTGTCATGGCGCCTGCACCTGCAGCACAGAGACTTTCCTCTGGAGACCCTTCTACAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000373863.3
ENST00000373871.8
ENST00000436342.6
ENST00000468665.1
ENST00000471498.5
ENST00000540618.5
CDS GCA 72 bp TGGACTTGTAGAAGGGTCTCCAGAGGAAAGTCTCTGTaGTGCAGGTGCAGGCGCCATGACACTAGGCTTCTC +
Preference number: 6 (lower is better)
Translates to: WTCRRVSRGKSL*CRCRRHDTRLL
Trigger: GAGAAGCCTAGTGTCATGGCGCCTGCACCTGCAGCACAGAGACTTTCCTCTGGAGACCCTTCTACAAGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000373863.3
ENST00000373871.8
ENST00000436342.6
ENST00000468665.1
ENST00000471498.5
ENST00000540618.5
CDS GCA 72 bp TGTAGAAGGGTCAGAGGAAAGTCTCTGTGCTGCAGGTaGAGGCGCCATGACACTAGGCTTCTCCGACTGGTA +
Preference number: 6 (lower is better)
Translates to: CRRVRGKSLCCR*RRHDTRLLRLV
Trigger: TACCAGTCGGAGAAGCCTAGTGTCATGGCGCCTGCACCTGCAGCACAGAGACTTTCCTCTGACCCTTCTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373864.5
CDS GCA 72 bp AGATGGACTTGTAGAAGGGTCAGAGGAAAGTCTCTGTaGTGCAGGTGCAGGCGCCATGACACTAGGCTTCTC +
Preference number: 6 (lower is better)
Translates to: RWTCRRVRGKSL*CRCRRHDTRLL
Trigger: GAGAAGCCTAGTGTCATGGCGCCTGCACCTGCAGCACAGAGACTTTCCTCTGACCCTTCTACAAGTCCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373864.5
CDS CAA 90 bp TACCTGGCCACAATGCACCAAAAGGAGGTAGTCCATACGTTTGGGTaGCCTGAGGGTAGACAGCATAGGGTTGAGTCTGCTGTAGTGTCT +
Preference number: 6 (lower is better)
Translates to: YLATMHQKEVVHTFG*PEGRQHRVESAVVS
Trigger: AGACACTACAGCAGACTCAACCCTATGCTGTCTACCCTCAGGCAACCCAAACGTATGGACTACCTCCTTTTGGTGCATTGTGGCCAGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000471498.5
CDS CCA 72 bp ATTTCTGCTCTTAATCTCTGCAGTGCTTCCTTCCTCTaGGGACTGAGGAGACCACCCACGTTGCTTTTATGC +
Preference number: 6 (lower is better)
Translates to: ISALNLCSASFL*GLRRPPTLLLC
Trigger: GCATAAAAGCAACGTGGGTGGTCTCCTCAGTCCCCAGAGGAAGGAAGCACTGCAGAGATTAAGAGCAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000373863.3
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000471498.5
ENST00000495923.5
ENST00000540618.5
CDS CAA 72 bp TGCTTGAAGCAAAAGGAGGTAGTCCATACGTTTGGGTaGCCTGAGGGTAGACAGCATAGGGTTGAGTCTGCT +
Preference number: 6 (lower is better)
Translates to: CLKQKEVVHTFG*PEGRQHRVESA
Trigger: AGCAGACTCAACCCTATGCTGTCTACCCTCAGGCAACCCAAACGTATGGACTACCTCCTTTTGCTTCAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373863.3
ENST00000468665.1
ENST00000540618.5
CDS CAA 72 bp ACAATGCACCAAAAGGAGGTAGTCCATACGTTTGGGTaGCCTGAGGGTAGACAGCATAGGGTTGAGTCTGCT +
Preference number: 6 (lower is better)
Translates to: TMHQKEVVHTFG*PEGRQHRVESA
Trigger: AGCAGACTCAACCCTATGCTGTCTACCCTCAGGCAACCCAAACGTATGGACTACCTCCTTTTGGTGCATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373871.8
ENST00000436342.6
ENST00000471498.5
CDS CAA 90 bp TGGCATTTGTGCTTGAAGCAAAAGGAGGTAGTCCATACGTTTGGGTaGCCTGAGGGTAGACAGCATAGGGTTGAGTCTGCTGTAGTGTCT +
Preference number: 6 (lower is better)
Translates to: WHLCLKQKEVVHTFG*PEGRQHRVESAVVS
Trigger: AGACACTACAGCAGACTCAACCCTATGCTGTCTACCCTCAGGCAACCCAAACGTATGGACTACCTCCTTTTGCTTCAAGCACAAATGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373863.3
ENST00000468665.1
ENST00000540618.5
CDS TCA 72 bp CAGATGAACCATGGCTGCCACTACCTCCTGAGCCACTaGAACCATCTGTTGAGAAACTGTAGTTGCTCAAGT +
Preference number: 6 (lower is better)
Translates to: QMNHGCHYLLSH*NHLLRNCSCSS
Trigger: ACTTGAGCAACTACAGTTTCTCAACAGATGGTTTCAGTGGCTCAGGAGGTAGTGGCAGCCATGGTTCATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000373863.3
ENST00000373864.5
ENST00000373871.8
ENST00000436342.6
ENST00000471498.5
ENST00000495923.5
ENST00000540618.5
CDS TCA 72 bp TTGAAGCAAGGCTTGATGTTTCAGGCTTCTGATCACTaGCATCTGGATTGCTTACTTGATGGTTGCTCTGGT +
Preference number: 6 (lower is better)
Translates to: LKQGLMFQASDH*HLDCLLDGCSG
Trigger: ACCAGAGCAACCATCAAGTAAGCAATCCAGATGTCAGTGATCAGAAGCCTGAAACATCAAGCCTTGCTTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373864.5
CDS CCA 72 bp ATCAGTATCTTTACTTGGTGTAGTCTGGGACAAAGATaGACTTGTAGAAGGGTCTCCAGAGGAAAGTCTCTG +
Preference number: 6 (lower is better)
Translates to: ISIFTWCSLGQR*TCRRVSRGKSL
Trigger: CAGAGACTTTCCTCTGGAGACCCTTCTACAAGTCCATCTTTGTCCCAGACTACACCAAGTAAAGATACTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000373863.3
ENST00000373871.8
ENST00000436342.6
ENST00000468665.1
ENST00000471498.5
ENST00000540618.5
CDS TCA 72 bp AGTCTGTCCAGGGTAAGCAGTTTCCGAAACAGGAACTaGGAGAATATGTGCATAAGGTTTTGCAGAATACAT +
Preference number: 6 (lower is better)
Translates to: SLSRVSSFRNRN*ENMCIRFCRIH
Trigger: ATGTATTCTGCAAAACCTTATGCACATATTCTCTCAGTTCCTGTTTCGGAAACTGCTTACCCTGGACAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373863.3
ENST00000373871.8
ENST00000436342.6
ENST00000471498.5
ENST00000540618.5
CDS TCA 72 bp TCACTGGTTGCTCTGGTAAATCTTGCTCTTCTTCCATaGGGACCAATATTTCTTTATTATACTTATGTGACT +
Preference number: 6 (lower is better)
Translates to: SLVALVNLALLP*GPIFLYYTYVT
Trigger: AGTCACATAAGTATAATAAAGAAATATTGGTCCTCATGGAAGAAGAGCAAGATTTACCAGAGCAACCAGTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373863.3
ENST00000373871.8
ENST00000436342.6
ENST00000471498.5
ENST00000540618.5
CDS TCA 72 bp TTGATGGTTGCTCTGGTAAATCTTGCTCTTCTTCCATaGGGACCAATATTTCTTTATTATACTTATGTGACT +
Preference number: 6 (lower is better)
Translates to: LMVALVNLALLP*GPIFLYYTYVT
Trigger: AGTCACATAAGTATAATAAAGAAATATTGGTCCTCATGGAAGAAGAGCAAGATTTACCAGAGCAACCATCAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373864.5