RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EYA2 (Homo sapiens)

Ensembl gene IDs: ENSG00000064655

Ensembl transcript IDs: ENST00000317304.10, ENST00000327619.10, ENST00000357410.7, ENST00000458636.2, ENST00000471081.1, ENST00000475856.1, ENST00000497062.6, ENST00000497428.1, ENST00000611592.4

Found 404 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GATGGACGGCTTCTGAGATGGTCACTGGACACGTCGTCTCGGCTGTaGGGCCCCTTCCTGGTGTCCAACATCTGGGTCTCTGGAGTTCTC +
Preference number: 1 (lower is better)
Translates to: DGRLLRWSLDTSSRL*GPFLVSNIWVSGVL
Trigger: GAGAACTCCAGAGACCCAGATGTTGGACACCAGGAAGGGGCCCCACAGCCGAGACGACGTGTCCAGTGACCATCTCAGAAGCCGTCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
3UTR TCA 90 bp GAAGCCAATGTTGGGTACTTTCCTTCTCAGAACCCCCATTTGGACTaGTGGACGGCTTCTGAGATGGTCACTGGACACGTCGTCTCGGCT +
Preference number: 1 (lower is better)
Translates to: EANVGYFPSQNPHLD*WTASEMVTGHVVSA
Trigger: AGCCGAGACGACGTGTCCAGTGACCATCTCAGAAGCCGTCCATCAGTCCAAATGGGGGTTCTGAGAAGGAAAGTACCCAACATTGGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
3UTR CCA 90 bp ACTCCGAAGCCAATGTTGGGTACTTTCCTTCTCAGAACCCCCATTTaGACTGATGGACGGCTTCTGAGATGGTCACTGGACACGTCGTCT +
Preference number: 1 (lower is better)
Translates to: TPKPMLGTFLLRTPI*TDGRLLRWSLDTSS
Trigger: AGACGACGTGTCCAGTGACCATCTCAGAAGCCGTCCATCAGTCCAAATGGGGGTTCTGAGAAGGAAAGTACCCAACATTGGCTTCGGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
3UTR TCA 90 bp TCTTTTCAACAGCTTGAACTGCCTTCCTCTCTAATGTTCAAAGAATaGTTGTCCCCACAAAGCACAACTTGGAGAATAGAGTGCTTACAT +
Preference number: 1 (lower is better)
Translates to: SFQQLELPSSLMFKE*LSPQSTTWRIECLH
Trigger: ATGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGGGACAATCATTCTTTGAACATTAGAGAGGAAGGCAGTTCAAGCTGTTGAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
3UTR-3UTR CCA 90 bp CTGAGATGGTCACTGGACACGTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCTTCTCGGTGGGGAGGTaGGGAAGGCGAGGGGGTCTG +
Preference number: 2 (lower is better)
Translates to: LRWSLDTSSRLWGPFLVSFSVGR*GRRGGL
Trigger: CAGACCCCCTCGCCTTCCCCACCTCCCCACCGAGAA...GGACACCAGGAAGGGGCCCCACAGCCGAGACGACGTGTCCAGTGACCATCTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
3UTR-3UTR CCA 90 bp ACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTGGGTTGTGGGGCCCCTTCCTaGTGTCCAACATCTGGGTCT +
Preference number: 2 (lower is better)
Translates to: TPSQPFSPKSNTPKPMLGCGAPS*CPTSGS
Trigger: AGACCCAGATGTTGGACACCAGGAAGGGGCCCCACA...ACCCAACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
3UTR-3UTR CCA 90 bp TTCCTTCTCAGAACCCCCATTTGGACTGATGGACGGCTTCTGAGATGGTCACTGCAACATCTGGGTCTCTaGAGTTCTCGGTGGGGAGGT +
Preference number: 2 (lower is better)
Translates to: FLLRTPIWTDGRLLRWSLQHLGL*SSRWGG
Trigger: ACCTCCCCACCGAGAACTCCAGAGACCCAGATGTTG...CAGTGACCATCTCAGAAGCCGTCCATCAGTCCAAATGGGGGTTCTGAGAAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
3UTR-3UTR CCA 90 bp ACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTGGGTGGACGGCTTCTGAGATaGTCACTGGACACGTCGTCT +
Preference number: 2 (lower is better)
Translates to: TPSQPFSPKSNTPKPMLGGRLLR*SLDTSS
Trigger: AGACGACGTGTCCAGTGACCATCTCAGAAGCCGTCC...ACCCAACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
3UTR-3UTR CCA 90 bp AGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTGGGGACGGCTTCTGAGATaGTCACTGGACACGTCGTCT +
Preference number: 2 (lower is better)
Translates to: RLRASPFPQSQILRSQCWGRLLR*SLDTSS
Trigger: AGACGACGTGTCCAGTGACCATCTCAGAAGCCGTCC...CCAACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
3UTR-3UTR TCA 90 bp TGTTCTGTGAGTCTTACAGAAGAGTCTAGACTCCGAGCCAGCCCTTTTCCCCAACTGATGGACGGCTTCTaGGATGGTCACTGGACACGT +
Preference number: 2 (lower is better)
Translates to: CSVSLTEESRLRASPFPQLMDGF*DGHWTR
Trigger: ACGTGTCCAGTGACCATCTCAGAAGCCGTCCATCAG...TTGGGGAAAAGGGCTGGCTCGGAGTCTAGACTCTTCTGTAAGACTCACAGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
3UTR-3UTR TCA 90 bp ACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTGGGTAACCCCCATTTGGACTaGTGGACGGCTTCTGAGATG +
Preference number: 2 (lower is better)
Translates to: TPSQPFSPKSNTPKPMLGNPHLD*WTASEM
Trigger: CATCTCAGAAGCCGTCCATCAGTCCAAATGGGGGTT...ACCCAACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
3UTR-3UTR CCA 90 bp GGCACGTGCACTGTCCACATGACGTCAAGTAGGTCTTTAAAAACAAAAATAAGCTTCTCGGTGGGGAGGTaGGGAAGGCGAGGGGGTCTG +
Preference number: 2 (lower is better)
Translates to: GTCTVHMTSSRSLKTKISFSVGR*GRRGGL
Trigger: CAGACCCCCTCGCCTTCCCCACCTCCCCACCGAGAA...GCTTATTTTTGTTTTTAAAGACCTACTTGACGTCATGTGGACAGTGCACGTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
3UTR-3UTR CCA 90 bp TTCCTTCTCAGAACCCCCATTTGGACTGATGGACGGCTTCTGAGATGGTCACTGCTGGTGTCCAACATCTaGGTCTCTGGAGTTCTCGGT +
Preference number: 2 (lower is better)
Translates to: FLLRTPIWTDGRLLRWSLLVSNI*VSGVLG
Trigger: ACCGAGAACTCCAGAGACCCAGATGTTGGACACCAG...CAGTGACCATCTCAGAAGCCGTCCATCAGTCCAAATGGGGGTTCTGAGAAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
3UTR-3UTR CCA 90 bp CTAGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTGGACGGCTTCTGAGATaGTCACTGGACACGTCGTCT +
Preference number: 2 (lower is better)
Translates to: LDSEPALFPKVKYSEANVGRLLR*SLDTSS
Trigger: AGACGACGTGTCCAGTGACCATCTCAGAAGCCGTCC...AACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
3UTR-3UTR CCA 90 bp ACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTGGGTCTCAGAACCCCCATTTaGACTGATGGACGGCTTCTG +
Preference number: 2 (lower is better)
Translates to: TPSQPFSPKSNTPKPMLGLRTPI*TDGRLL
Trigger: CAGAAGCCGTCCATCAGTCCAAATGGGGGTTCTGAG...ACCCAACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
3UTR-3UTR CCA 90 bp TGTTCTGTGAGTCTTACAGAAGAGTCTAGACTCCGAGCCAGCCCTTTTCCCCAACTCCGAAGCCAATGTTaGGTACTTTCCTTCTCAGAA +
Preference number: 2 (lower is better)
Translates to: CSVSLTEESRLRASPFPQLRSQC*VLSFSE
Trigger: TTCTGAGAAGGAAAGTACCCAACATTGGCTTCGGAG...TTGGGGAAAAGGGCTGGCTCGGAGTCTAGACTCTTCTGTAAGACTCACAGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
3UTR-3UTR CCA 90 bp GTTCAAAGAATGATTGTCCCCACAAAGCACAACTTGGAGAATAGAGTGCTTACACAACATCTGGGTCTCTaGAGTTCTCGGTGGGGAGGT +
Preference number: 2 (lower is better)
Translates to: VQRMIVPTKHNLENRVLTQHLGL*SSRWGG
Trigger: ACCTCCCCACCGAGAACTCCAGAGACCCAGATGTTG...TGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGGGACAATCATTCTTTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
3UTR-3UTR TCA 90 bp AGAATGATTGTCCCCACAAAGCACAACTTGGAGAATAGAGTGCTTACATTAGAACTGATGGACGGCTTCTaGGATGGTCACTGGACACGT +
Preference number: 2 (lower is better)
Translates to: RMIVPTKHNLENRVLTLELMDGF*DGHWTR
Trigger: ACGTGTCCAGTGACCATCTCAGAAGCCGTCCATCAG...TTCTAATGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGGGACAATCATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
3UTR-3UTR CCA 90 bp GCCTTCCTCTCTAATGTTCAAAGAATGATTGTCCCCACAAAGCACAACTTGGAGCTCCGAAGCCAATGTTaGGTACTTTCCTTCTCAGAA +
Preference number: 2 (lower is better)
Translates to: AFLSNVQRMIVPTKHNLELRSQC*VLSFSE
Trigger: TTCTGAGAAGGAAAGTACCCAACATTGGCTTCGGAG...CTCCAAGTTGTGCTTTGTGGGGACAATCATTCTTTGAACATTAGAGAGGAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
3UTR-3UTR TCA 90 bp GGCACGTGCACTGTCCACATGACGTCAAGTAGGTCTTTAAAAACAAAAATAAGCCTAATGTTCAAAGAATaGTTGTCCCCACAAAGCACA +
Preference number: 2 (lower is better)
Translates to: GTCTVHMTSSRSLKTKISLMFKE*LSPQST
Trigger: TGTGCTTTGTGGGGACAATCATTCTTTGAACATTAG...GCTTATTTTTGTTTTTAAAGACCTACTTGACGTCATGTGGACAGTGCACGTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
3UTR-3UTR TCA 90 bp AGAATGATTGTCCCCACAAAGCACAACTTGGAGAATAGAGTGCTTACATTAGAACTTGCTTTTGTTCTGTaGGTCTTACAGAAGAGTCTA +
Preference number: 2 (lower is better)
Translates to: RMIVPTKHNLENRVLTLELAFVL*VLQKSL
Trigger: TAGACTCTTCTGTAAGACTCACAGAACAAAAGCAAG...TTCTAATGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGGGACAATCATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
3UTR-3UTR GCA 90 bp GTTCAAAGAATGATTGTCCCCACAAAGCACAACTTGGAGAATAGAGTGCTTACAAAATCAGCAATTCCTTaGTTTTGTTCTGTGAGTCTT +
Preference number: 2 (lower is better)
Translates to: VQRMIVPTKHNLENRVLTKSAIP*FCSVSL
Trigger: AAGACTCACAGAACAAAAGCAAGGAATTGCTGATTT...TGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGGGACAATCATTCTTTGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
3UTR-3UTR TCA 90 bp ACACAGGTACAAGAGCATAATTCCGGAGTAATGAGACTAGTCCATAAATTAAAACTTGCTTTTGTTCTGTaGGTCTTACAGAAGAGTCTA +
Preference number: 2 (lower is better)
Translates to: TQVQEHNSGVMRLVHKLKLAFVL*VLQKSL
Trigger: TAGACTCTTCTGTAAGACTCACAGAACAAAAGCAAG...TTTTAATTTATGGACTAGTCTCATTACTCCGGAATTATGCTCTTGTACCTGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
3UTR CCA 72 bp CACTGGACACGTCGTCTCGGCTGTGGGGCCCCTTCCTaGTGTCCAACATCTGGGTCTCTGGAGTTCTCGGTG +
Preference number: 3 (lower is better)
Translates to: HWTRRLGCGAPS*CPTSGSLEFSV
Trigger: CACCGAGAACTCCAGAGACCCAGATGTTGGACACCAGGAAGGGGCCCCACAGCCGAGACGACGTGTCCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
3UTR CCA 72 bp AGAACCCCCATTTGGACTGATGGACGGCTTCTGAGATaGTCACTGGACACGTCGTCTCGGCTGTGGGGCCCC +
Preference number: 3 (lower is better)
Translates to: RTPIWTDGRLLR*SLDTSSRLWGP
Trigger: GGGGCCCCACAGCCGAGACGACGTGTCCAGTGACCATCTCAGAAGCCGTCCATCAGTCCAAATGGGGGTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
3UTR TCA 72 bp TTCTCAGAACCCCCATTTGGACTGATGGACGGCTTCTaGGATGGTCACTGGACACGTCGTCTCGGCTGTGGG +
Preference number: 3 (lower is better)
Translates to: FSEPPFGLMDGF*DGHWTRRLGCG
Trigger: CCCACAGCCGAGACGACGTGTCCAGTGACCATCTCAGAAGCCGTCCATCAGTCCAAATGGGGGTTCTGAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
3UTR TCA 72 bp GTTGGGTACTTTCCTTCTCAGAACCCCCATTTGGACTaGTGGACGGCTTCTGAGATGGTCACTGGACACGTC +
Preference number: 3 (lower is better)
Translates to: VGYFPSQNPHLD*WTASEMVTGHV
Trigger: GACGTGTCCAGTGACCATCTCAGAAGCCGTCCATCAGTCCAAATGGGGGTTCTGAGAAGGAAAGTACCCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
3UTR CCA 72 bp CCAATGTTGGGTACTTTCCTTCTCAGAACCCCCATTTaGACTGATGGACGGCTTCTGAGATGGTCACTGGAC +
Preference number: 3 (lower is better)
Translates to: PMLGTFLLRTPI*TDGRLLRWSLD
Trigger: GTCCAGTGACCATCTCAGAAGCCGTCCATCAGTCCAAATGGGGGTTCTGAGAAGGAAAGTACCCAACATTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
3UTR-3UTR CAA 90 bp GCCTTCCTCTCTAATGTTCAAAGAATGATTGTCCCCACAAAGCACAACTTGGAGACTCCGAAGCCAATGTaGGGTACTTTCCTTCTCAGA +
Preference number: 3 (lower is better)
Translates to: AFLSNVQRMIVPTKHNLETPKPM*GTFLLR
Trigger: TCTGAGAAGGAAAGTACCCAACATTGGCTTCGGAGT...CTCCAAGTTGTGCTTTGTGGGGACAATCATTCTTTGAACATTAGAGAGGAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
3UTR-3UTR CAA 90 bp GGCACGTGCACTGTCCACATGACGTCAAGTAGGTCTTTAAAAACAAAAATAAGCACTCCGAAGCCAATGTaGGGTACTTTCCTTCTCAGA +
Preference number: 3 (lower is better)
Translates to: GTCTVHMTSSRSLKTKISTPKPM*GTFLLR
Trigger: TCTGAGAAGGAAAGTACCCAACATTGGCTTCGGAGT...GCTTATTTTTGTTTTTAAAGACCTACTTGACGTCATGTGGACAGTGCACGTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
3UTR TCA 72 bp CAGCTTGAACTGCCTTCCTCTCTAATGTTCAAAGAATaGTTGTCCCCACAAAGCACAACTTGGAGAATAGAG +
Preference number: 3 (lower is better)
Translates to: QLELPSSLMFKE*LSPQSTTWRIE
Trigger: CTCTATTCTCCAAGTTGTGCTTTGTGGGGACAATCATTCTTTGAACATTAGAGAGGAAGGCAGTTCAAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
3UTR-3UTR CAA 90 bp CCAGCCACACAGGTACAAGAGCATAATTCCGGAGTAATGAGACTAGTCCATAAACAAATCAGCAATTCCTaGCTTTTGTTCTGTGAGTCT +
Preference number: 3 (lower is better)
Translates to: PATQVQEHNSGVMRLVHKQISNS*LLFCES
Trigger: AGACTCACAGAACAAAAGCAAGGAATTGCTGATTTG...TTTATGGACTAGTCTCATTACTCCGGAATTATGCTCTTGTACCTGTGTGGCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
3UTR-3UTR CAA 90 bp ACACAGGTACAAGAGCATAATTCCGGAGTAATGAGACTAGTCCATAAATTAAAAACTCCGAAGCCAATGTaGGGTACTTTCCTTCTCAGA +
Preference number: 3 (lower is better)
Translates to: TQVQEHNSGVMRLVHKLKTPKPM*GTFLLR
Trigger: TCTGAGAAGGAAAGTACCCAACATTGGCTTCGGAGT...TTTTAATTTATGGACTAGTCTCATTACTCCGGAATTATGCTCTTGTACCTGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
3UTR-3UTR CAA 90 bp CAAAGAATGATTGTCCCCACAAAGCACAACTTGGAGAATAGAGTGCTTACATTAAGCAATTCCTTGCTTTaGTTCTGTGAGTCTTACAGA +
Preference number: 3 (lower is better)
Translates to: QRMIVPTKHNLENRVLTLSNSLL*FCESYR
Trigger: TCTGTAAGACTCACAGAACAAAAGCAAGGAATTGCT...TAATGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGGGACAATCATTCTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp CTGAGATGGTCACTGGACACGTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCTTGTACCGCGCGCAGTaGAGAGGGCGCCCCGACGCG +
Preference number: 4 (lower is better)
Translates to: LRWSLDTSSRLWGPFLVSLYRAQ*RGRPDA
Trigger: CGCGTCGGGGCGCCCTCTCCACTGCGCGCGGTACAA...GGACACCAGGAAGGGGCCCCACAGCCGAGACGACGTGTCCAGTGACCATCTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp ACTGGACACGTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCAACATCTGGGTCAGTCCACGCCGCCGTaGACGCCAGAGCCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: TGHVVSAVGPLPGVQHLGQSTPP*TPEPRH
Trigger: GTGCCTGGGCTCTGGCGTGCACGGCGGCGTGGACTG...ACCCAGATGTTGGACACCAGGAAGGGGCCCCACAGCCGAGACGACGTGTCCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp GTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCAACATCTGGGTCTCTGGAGTCAGTCCACGCCGCCGTaGACGCCAGAGCCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: VVSAVGPLPGVQHLGLWSQSTPP*TPEPRH
Trigger: GTGCCTGGGCTCTGGCGTGCACGGCGGCGTGGACTG...ACTCCAGAGACCCAGATGTTGGACACCAGGAAGGGGCCCCACAGCCGAGACGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp GTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCAACATCTGGGTCTCTGGAGTGGGGCGAAGGGCAGATaGTGCTGGCCGGGACGTAGG +
Preference number: 4 (lower is better)
Translates to: VVSAVGPLPGVQHLGLWSGAKGR*CWPGRR
Trigger: CCTACGTCCCGGCCAGCAGCATCTGCCCTTCGCCCC...ACTCCAGAGACCCAGATGTTGGACACCAGGAAGGGGCCCCACAGCCGAGACGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp ACTGGACACGTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCAACATCTGGGTGGCCGTAGGCTGCCATaGCTGTGGAAGGCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: TGHVVSAVGPLPGVQHLGGRRLP*LWKAGG
Trigger: CCCGCCAGCCTTCCACAGCCATGGCAGCCTACGGCC...ACCCAGATGTTGGACACCAGGAAGGGGCCCCACAGCCGAGACGACGTGTCCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp GTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCAACATCTGGGTCTCTGGAGTGGCCGTAGGCTGCCATaGCTGTGGAAGGCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: VVSAVGPLPGVQHLGLWSGRRLP*LWKAGG
Trigger: CCCGCCAGCCTTCCACAGCCATGGCAGCCTACGGCC...ACTCCAGAGACCCAGATGTTGGACACCAGGAAGGGGCCCCACAGCCGAGACGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR TCA 90 bp AGAACCCCCATTTGGACTGATGGACGGCTTCTGAGATGGTCACTGGACACGTCGCCGACGAGGCCGGGCTaGCTGCGGCGGGCACGTTGC +
Preference number: 4 (lower is better)
Translates to: RTPIWTDGRLLRWSLDTSPTRPG*LRRARC
Trigger: GCAACGTGCCCGCCGCAGTCAGCCCGGCCTCGTCGG...CGACGTGTCCAGTGACCATCTCAGAAGCCGTCCATCAGTCCAAATGGGGGTTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp CGGCTGTGGGGCCCCTTCCTGGTGTCCAACATCTGGGTCTCTGGAGTTCTCGGTTGCTGTCTCTGCCGTTaGCGCTGCCTCCGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: RLWGPFLVSNIWVSGVLGCCLCR*RCLRLL
Trigger: CAGGAGGCGGAGGCAGCGGCAACGGCAGAGACAGCA...ACCGAGAACTCCAGAGACCCAGATGTTGGACACCAGGAAGGGGCCCCACAGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000611592.4
CDS-3UTR CCA 90 bp CGGCTGTGGGGCCCCTTCCTGGTGTCCAACATCTGGGTCTCTGGAGTTCTCGGTTTCTCGGTGGGGAGGTaGGGAAGGCGAGGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: RLWGPFLVSNIWVSGVLGFSVGR*GRRGGL
Trigger: CAGACCCCCTCGCCTTCCCCACCTCCCCACCGAGAA...ACCGAGAACTCCAGAGACCCAGATGTTGGACACCAGGAAGGGGCCCCACAGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR TCA 90 bp GATGGTCACTGGACACGTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCAACAGCTCTGTCCAGTGGGTaGGGTGCTGAAGCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: DGHWTRRLGCGAPSWCPTALSSG*GAEAGA
Trigger: GGCTCCAGCTTCAGCACCTCACCCACTGGACAGAGC...TGTTGGACACCAGGAAGGGGCCCCACAGCCGAGACGACGTGTCCAGTGACCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000611592.4
CDS-3UTR GCA 90 bp GTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCAACATCTGGGTCTCTGGAGTCGTCTGGCCGTAGGCTaGCATGGCTGTGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: VVSAVGPLPGVQHLGLWSRLAVG*HGCGRL
Trigger: CAGCCTTCCACAGCCATGGCAGCCTACGGCCAGACG...ACTCCAGAGACCCAGATGTTGGACACCAGGAAGGGGCCCCACAGCCGAGACGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp ACTGATGGACGGCTTCTGAGATGGTCACTGGACACGTCGTCTCGGCTGTGGGGCGCGAAGGGCAGATGCTaGTGGCCGGGACGTAGGGAG +
Preference number: 4 (lower is better)
Translates to: TDGRLLRWSLDTSSRLWGAKGRC*WPGRRE
Trigger: CTCCCTACGTCCCGGCCAGCAGCATCTGCCCTTCGC...GCCCCACAGCCGAGACGACGTGTCCAGTGACCATCTCAGAAGCCGTCCATCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp CGGCTGTGGGGCCCCTTCCTGGTGTCCAACATCTGGGTCTCTGGAGTTCTCGGTAAGGGCAGATGCTGCTaGCCGGGACGTAGGGAGGGT +
Preference number: 4 (lower is better)
Translates to: RLWGPFLVSNIWVSGVLGKGRCC*PGRREG
Trigger: ACCCTCCCTACGTCCCGGCCAGCAGCATCTGCCCTT...ACCGAGAACTCCAGAGACCCAGATGTTGGACACCAGGAAGGGGCCCCACAGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp ACTGGACACGTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCAACATCTGGGTCCTGGAGGACGTAGGTaGACGTGGAGAGGGGCGAAG +
Preference number: 4 (lower is better)
Translates to: TGHVVSAVGPLPGVQHLGPGGRR*TWRGAK
Trigger: CTTCGCCCCTCTCCACGTCCACCTACGTCCTCCAGG...ACCCAGATGTTGGACACCAGGAAGGGGCCCCACAGCCGAGACGACGTGTCCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp CTGAGATGGTCACTGGACACGTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCTGCGCACGGACGTCGTaGTGTCCTTCCCGTATCTGG +
Preference number: 4 (lower is better)
Translates to: LRWSLDTSSRLWGPFLVSCARTS*CPSRIW
Trigger: CCAGATACGGGAAGGACACCACGACGTCCGTGCGCA...GGACACCAGGAAGGGGCCCCACAGCCGAGACGACGTGTCCAGTGACCATCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
CDS-3UTR CCA 90 bp CGGCTGTGGGGCCCCTTCCTGGTGTCCAACATCTGGGTCTCTGGAGTTCTCGGTCCTGGGGCCGAACTGTaGAAGCCGTCAGCGGAGAAG +
Preference number: 4 (lower is better)
Translates to: RLWGPFLVSNIWVSGVLGPGAEL*KPSAEK
Trigger: CTTCTCCGCTGACGGCTTCCACAGTTCGGCCCCAGG...ACCGAGAACTCCAGAGACCCAGATGTTGGACACCAGGAAGGGGCCCCACAGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp GATGGTCACTGGACACGTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCAACAGCACAGGTTGGCTCCTaGGGCCGAACTGTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: DGHWTRRLGCGAPSWCPTAQVGS*GRTVEA
Trigger: GGCTTCCACAGTTCGGCCCCAGGAGCCAACCTGTGC...TGTTGGACACCAGGAAGGGGCCCCACAGCCGAGACGACGTGTCCAGTGACCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR TCA 90 bp GATGGTCACTGGACACGTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCAACATGGTTGGGGACGTTGTaGGATGCCTCCTGGAGGACG +
Preference number: 4 (lower is better)
Translates to: DGHWTRRLGCGAPSWCPTWLGTL*DASWRT
Trigger: CGTCCTCCAGGAGGCATCTCACAACGTCCCCAACCA...TGTTGGACACCAGGAAGGGGCCCCACAGCCGAGACGACGTGTCCAGTGACCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp CGGCTGTGGGGCCCCTTCCTGGTGTCCAACATCTGGGTCTCTGGAGTTCTCGGTCAGTGCCTCCAGGTCTaGGTGGCAGGATATCCGCCA +
Preference number: 4 (lower is better)
Translates to: RLWGPFLVSNIWVSGVLGQCLQV*VAGYPP
Trigger: TGGCGGATATCCTGCCACGCAGACCTGGAGGCACTG...ACCGAGAACTCCAGAGACCCAGATGTTGGACACCAGGAAGGGGCCCCACAGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp ACTGATGGACGGCTTCTGAGATGGTCACTGGACACGTCGTCTCGGCTGTGGGGCGCACAGGTTGGCTCCTaGGGCCGAACTGTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: TDGRLLRWSLDTSSRLWGAQVGS*GRTVEA
Trigger: GGCTTCCACAGTTCGGCCCCAGGAGCCAACCTGTGC...GCCCCACAGCCGAGACGACGTGTCCAGTGACCATCTCAGAAGCCGTCCATCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp CTGAGATGGTCACTGGACACGTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCGCCTCCAGGTCTGCGTaGCAGGATATCCGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: LRWSLDTSSRLWGPFLVSASRSA*QDIRQK
Trigger: TTTCTGGCGGATATCCTGCCACGCAGACCTGGAGGC...GGACACCAGGAAGGGGCCCCACAGCCGAGACGACGTGTCCAGTGACCATCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR TCA 90 bp ACAGAAGAGTCTAGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGACCGACGAGGCCGGGCTaGCTGCGGCGGGCACGTTGC +
Preference number: 4 (lower is better)
Translates to: TEESRLRASPFPQSQILRPTRPG*LRRARC
Trigger: GCAACGTGCCCGCCGCAGTCAGCCCGGCCTCGTCGG...TCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCTAGACTCTTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR TCA 90 bp CTAGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTCCGACGAGGCCGGGCTaGCTGCGGCGGGCACGTTGC +
Preference number: 4 (lower is better)
Translates to: LDSEPALFPKVKYSEANVPTRPG*LRRARC
Trigger: GCAACGTGCCCGCCGCAGTCAGCCCGGCCTCGTCGG...AACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp GTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCAACATCTGGGTCTCTGGAGTACTCCCGAAACCGGCTaGGTTGCCCAGTCCATTTCC +
Preference number: 4 (lower is better)
Translates to: VVSAVGPLPGVQHLGLWSTPETG*VAQSIS
Trigger: GGAAATGGACTGGGCAACGCAGCCGGTTTCGGGAGT...ACTCCAGAGACCCAGATGTTGGACACCAGGAAGGGGCCCCACAGCCGAGACGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp AGAACCCCCATTTGGACTGATGGACGGCTTCTGAGATGGTCACTGGACACGTCGGGGGCGAAGGGCAGATaGTGCTGGCCGGGACGTAGG +
Preference number: 4 (lower is better)
Translates to: RTPIWTDGRLLRWSLDTSGAKGR*CWPGRR
Trigger: CCTACGTCCCGGCCAGCAGCATCTGCCCTTCGCCCC...CGACGTGTCCAGTGACCATCTCAGAAGCCGTCCATCAGTCCAAATGGGGGTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp GTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCAACATCTGGGTCTCTGGAGTGCCTCCAGGTCTGCGTaGCAGGATATCCGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: VVSAVGPLPGVQHLGLWSASRSA*QDIRQK
Trigger: TTTCTGGCGGATATCCTGCCACGCAGACCTGGAGGC...ACTCCAGAGACCCAGATGTTGGACACCAGGAAGGGGCCCCACAGCCGAGACGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR TCA 90 bp ATACTCCGAAGCCAATGTTGGGTACTTTCCTTCTCAGAACCCCCATTTGGACTGCCGACGAGGCCGGGCTaGCTGCGGCGGGCACGTTGC +
Preference number: 4 (lower is better)
Translates to: ILRSQCWVLSFSEPPFGLPTRPG*LRRARC
Trigger: GCAACGTGCCCGCCGCAGTCAGCCCGGCCTCGTCGG...CAGTCCAAATGGGGGTTCTGAGAAGGAAAGTACCCAACATTGGCTTCGGAGTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR TCA 90 bp CTGAGATGGTCACTGGACACGTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCAACCCCCATTTGGACTaGTGGACGGCTTCTGAGATG +
Preference number: 4 (lower is better)
Translates to: LRWSLDTSSRLWGPFLVSNPHLD*WTASEM
Trigger: CATCTCAGAAGCCGTCCATCAGTCCAAATGGGGGTT...GGACACCAGGAAGGGGCCCCACAGCCGAGACGACGTGTCCAGTGACCATCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp AGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTGGCCGTCGGAGGCCCGGTaGGGCCTGTCTGTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: RLRASPFPQSQILRSQCWPSEAR*GLSVSP
Trigger: GGGAGACACAGACAGGCCGCACCGGGCCTCCGACGG...CCAACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp TTCCTTCTCAGAACCCCCATTTGGACTGATGGACGGCTTCTGAGATGGTCACTGCCGTCGGAGGCCCGGTaGGGCCTGTCTGTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: FLLRTPIWTDGRLLRWSLPSEAR*GLSVSP
Trigger: GGGAGACACAGACAGGCCGCACCGGGCCTCCGACGG...CAGTGACCATCTCAGAAGCCGTCCATCAGTCCAAATGGGGGTTCTGAGAAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp ACTGATGGACGGCTTCTGAGATGGTCACTGGACACGTCGTCTCGGCTGTGGGGCAATCTCATTGTCCCCTaGCGGGGACGGGTCACTGCT +
Preference number: 4 (lower is better)
Translates to: TDGRLLRWSLDTSSRLWGNLIVP*RGRVTA
Trigger: AGCAGTGACCCGTCCCCGGCAGGGGACAATGAGATT...GCCCCACAGCCGAGACGACGTGTCCAGTGACCATCTCAGAAGCCGTCCATCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp ACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTGGGTCAGTCCACGCCGCCGTaGACGCCAGAGCCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: TPSQPFSPKSNTPKPMLGQSTPP*TPEPRH
Trigger: GTGCCTGGGCTCTGGCGTGCACGGCGGCGTGGACTG...ACCCAACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp GATGGTCACTGGACACGTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCAACAGGCTTGTGCTGGAGGTaGGTAAGCTGTATAGGGGGT +
Preference number: 4 (lower is better)
Translates to: DGHWTRRLGCGAPSWCPTGLCWR*VSCIGG
Trigger: ACCCCCTATACAGCTTACCCACCTCCAGCACAAGCC...TGTTGGACACCAGGAAGGGGCCCCACAGCCGAGACGACGTGTCCAGTGACCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp CTGAGATGGTCACTGGACACGTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCCTGAGGAATCCACTCTaGCCAGGGGAATGGTTCAAG +
Preference number: 4 (lower is better)
Translates to: LRWSLDTSSRLWGPFLVSLRNPL*PGEWFK
Trigger: CTTGAACCATTCCCCTGGCCAGAGTGGATTCCTCAG...GGACACCAGGAAGGGGCCCCACAGCCGAGACGACGTGTCCAGTGACCATCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000611592.4
CDS-3UTR CCA 90 bp CTGAGATGGTCACTGGACACGTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCGTCTCCCTCTTTCGCTaGTGTGGAAGGTCCATTGTG +
Preference number: 4 (lower is better)
Translates to: LRWSLDTSSRLWGPFLVSVSLFR*CGRSIV
Trigger: CACAATGGACCTTCCACACCAGCGAAAGAGGGAGAC...GGACACCAGGAAGGGGCCCCACAGCCGAGACGACGTGTCCAGTGACCATCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR TCA 90 bp ACTGATGGACGGCTTCTGAGATGGTCACTGGACACGTCGTCTCGGCTGTGGGGCGGGAGGGTTGTAGGATaGGCCGTAATACTGGGGGTA +
Preference number: 4 (lower is better)
Translates to: TDGRLLRWSLDTSSRLWGGRVVG*AVILGV
Trigger: TACCCCCAGTATTACGGCTCATCCTACAACCCTCCC...GCCCCACAGCCGAGACGACGTGTCCAGTGACCATCTCAGAAGCCGTCCATCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR TCA 90 bp GTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCAACATCTGGGTCTCTGGAGTAACCCCCATTTGGACTaGTGGACGGCTTCTGAGATG +
Preference number: 4 (lower is better)
Translates to: VVSAVGPLPGVQHLGLWSNPHLD*WTASEM
Trigger: CATCTCAGAAGCCGTCCATCAGTCCAAATGGGGGTT...ACTCCAGAGACCCAGATGTTGGACACCAGGAAGGGGCCCCACAGCCGAGACGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp TGTTCTGTGAGTCTTACAGAAGAGTCTAGACTCCGAGCCAGCCCTTTTCCCCAATTGTACCGCGCGCAGTaGAGAGGGCGCCCCGACGCG +
Preference number: 4 (lower is better)
Translates to: CSVSLTEESRLRASPFPQLYRAQ*RGRPDA
Trigger: CGCGTCGGGGCGCCCTCTCCACTGCGCGCGGTACAA...TTGGGGAAAAGGGCTGGCTCGGAGTCTAGACTCTTCTGTAAGACTCACAGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp ACTGATGGACGGCTTCTGAGATGGTCACTGGACACGTCGTCTCGGCTGTGGGGCCACGTGGGCAAGATCTaGAGAAGAGCTGGGACACTC +
Preference number: 4 (lower is better)
Translates to: TDGRLLRWSLDTSSRLWGHVGKI*RRAGTL
Trigger: GAGTGTCCCAGCTCTTCTCCAGATCTTGCCCACGTG...GCCCCACAGCCGAGACGACGTGTCCAGTGACCATCTCAGAAGCCGTCCATCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp AGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTGGGGCCGTAGGCTGCCATaGCTGTGGAAGGCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: RLRASPFPQSQILRSQCWGRRLP*LWKAGG
Trigger: CCCGCCAGCCTTCCACAGCCATGGCAGCCTACGGCC...CCAACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp ACTGATGGACGGCTTCTGAGATGGTCACTGGACACGTCGTCTCGGCTGTGGGGCGGCTTGTGCTGGAGGTaGGTAAGCTGTATAGGGGGT +
Preference number: 4 (lower is better)
Translates to: TDGRLLRWSLDTSSRLWGGLCWR*VSCIGG
Trigger: ACCCCCTATACAGCTTACCCACCTCCAGCACAAGCC...GCCCCACAGCCGAGACGACGTGTCCAGTGACCATCTCAGAAGCCGTCCATCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp ACTGATGGACGGCTTCTGAGATGGTCACTGGACACGTCGTCTCGGCTGTGGGGCGCCAGGTCTCCCTTTTaGGAGTGCCTATCAACCCAC +
Preference number: 4 (lower is better)
Translates to: TDGRLLRWSLDTSSRLWGARSPF*ECLSTH
Trigger: GTGGGTTGATAGGCACTCCCAAAAGGGAGACCTGGC...GCCCCACAGCCGAGACGACGTGTCCAGTGACCATCTCAGAAGCCGTCCATCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp GTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCAACATCTGGGTCTCTGGAGTCTGGTGTCCAACATCTaGGTCTCTGGAGTTCTCGGT +
Preference number: 4 (lower is better)
Translates to: VVSAVGPLPGVQHLGLWSLVSNI*VSGVLG
Trigger: ACCGAGAACTCCAGAGACCCAGATGTTGGACACCAG...ACTCCAGAGACCCAGATGTTGGACACCAGGAAGGGGCCCCACAGCCGAGACGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp ACTGGACACGTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCAACATCTGGGTCTGGTGTCCAACATCTaGGTCTCTGGAGTTCTCGGT +
Preference number: 4 (lower is better)
Translates to: TGHVVSAVGPLPGVQHLGLVSNI*VSGVLG
Trigger: ACCGAGAACTCCAGAGACCCAGATGTTGGACACCAG...ACCCAGATGTTGGACACCAGGAAGGGGCCCCACAGCCGAGACGACGTGTCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp GTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCAACATCTGGGTCTCTGGAGTCTCAGAACCCCCATTTaGACTGATGGACGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: VVSAVGPLPGVQHLGLWSLRTPI*TDGRLL
Trigger: CAGAAGCCGTCCATCAGTCCAAATGGGGGTTCTGAG...ACTCCAGAGACCCAGATGTTGGACACCAGGAAGGGGCCCCACAGCCGAGACGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp GATGGTCACTGGACACGTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCAACACTCAGAACCCCCATTTaGACTGATGGACGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: DGHWTRRLGCGAPSWCPTLRTPI*TDGRLL
Trigger: CAGAAGCCGTCCATCAGTCCAAATGGGGGTTCTGAG...TGTTGGACACCAGGAAGGGGCCCCACAGCCGAGACGACGTGTCCAGTGACCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR TCA 90 bp AGAACCCCCATTTGGACTGATGGACGGCTTCTGAGATGGTCACTGGACACGTCGTGGTTGGGGACGTTGTaGGATGCCTCCTGGAGGACG +
Preference number: 4 (lower is better)
Translates to: RTPIWTDGRLLRWSLDTSWLGTL*DASWRT
Trigger: CGTCCTCCAGGAGGCATCTCACAACGTCCCCAACCA...CGACGTGTCCAGTGACCATCTCAGAAGCCGTCCATCAGTCCAAATGGGGGTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp ACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTGGGTTGCTGTCTCTGCCGTTaGCGCTGCCTCCGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: TPSQPFSPKSNTPKPMLGCCLCR*RCLRLL
Trigger: CAGGAGGCGGAGGCAGCGGCAACGGCAGAGACAGCA...ACCCAACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000611592.4
CDS-3UTR GCA 90 bp AGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTGGGCGAAGGGCAGATGCTaGTGGCCGGGACGTAGGGAG +
Preference number: 4 (lower is better)
Translates to: RLRASPFPQSQILRSQCWAKGRC*WPGRRE
Trigger: CTCCCTACGTCCCGGCCAGCAGCATCTGCCCTTCGC...CCAACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp CTAGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTGGGGCGAAGGGCAGATaGTGCTGGCCGGGACGTAGG +
Preference number: 4 (lower is better)
Translates to: LDSEPALFPKVKYSEANVGAKGR*CWPGRR
Trigger: CCTACGTCCCGGCCAGCAGCATCTGCCCTTCGCCCC...AACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp GATGGTCACTGGACACGTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCAACATCTCCCTTTTGGGAGTaGCTATCAACCCACCAACGT +
Preference number: 4 (lower is better)
Translates to: DGHWTRRLGCGAPSWCPTSPFWE*LSTHQR
Trigger: ACGTTGGTGGGTTGATAGGCACTCCCAAAAGGGAGA...TGTTGGACACCAGGAAGGGGCCCCACAGCCGAGACGACGTGTCCAGTGACCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp GTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCAACATCTGGGTCTCTGGAGTTCTCCCTTTTGGGAGTaGCTATCAACCCACCAACGT +
Preference number: 4 (lower is better)
Translates to: VVSAVGPLPGVQHLGLWSSPFWE*LSTHQR
Trigger: ACGTTGGTGGGTTGATAGGCACTCCCAAAAGGGAGA...ACTCCAGAGACCCAGATGTTGGACACCAGGAAGGGGCCCCACAGCCGAGACGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp CTGAGATGGTCACTGGACACGTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCTCCATAGGCTTGTGCTaGAGGTGGGTAAGCTGTATA +
Preference number: 4 (lower is better)
Translates to: LRWSLDTSSRLWGPFLVSSIGLC*RWVSCI
Trigger: TATACAGCTTACCCACCTCCAGCACAAGCCTATGGA...GGACACCAGGAAGGGGCCCCACAGCCGAGACGACGTGTCCAGTGACCATCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp ACTGATGGACGGCTTCTGAGATGGTCACTGGACACGTCGTCTCGGCTGTGGGGCACTCGGAACTCTGGTTaGGGACGTTGTGAGATGCCT +
Preference number: 4 (lower is better)
Translates to: TDGRLLRWSLDTSSRLWGTRNSG*GRCEMP
Trigger: AGGCATCTCACAACGTCCCCAACCAGAGTTCCGAGT...GCCCCACAGCCGAGACGACGTGTCCAGTGACCATCTCAGAAGCCGTCCATCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR TCA 90 bp GATGGTCACTGGACACGTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCAACAAGGTGGAGATGCTGCTaGTCCTGCTATAAATACTCC +
Preference number: 4 (lower is better)
Translates to: DGHWTRRLGCGAPSWCPTRWRCC*SCYKYS
Trigger: GGAGTATTTATAGCAGGATCAGCAGCATCTCCACCT...TGTTGGACACCAGGAAGGGGCCCCACAGCCGAGACGACGTGTCCAGTGACCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp CGGCTGTGGGGCCCCTTCCTGGTGTCCAACATCTGGGTCTCTGGAGTTCTCGGTTGCTTTTTCGCTCCTTaGTCCTCTTCCACACCATCA +
Preference number: 4 (lower is better)
Translates to: RLWGPFLVSNIWVSGVLGCFFAP*SSSTPS
Trigger: TGATGGTGTGGAAGAGGAGCAAGGAGCGAAAAAGCA...ACCGAGAACTCCAGAGACCCAGATGTTGGACACCAGGAAGGGGCCCCACAGCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp TTCCTTCTCAGAACCCCCATTTGGACTGATGGACGGCTTCTGAGATGGTCACTGTCCAGCTCCAGGGCGTaGCTCAGTGCCTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: FLLRTPIWTDGRLLRWSLSSSRA*LSASRS
Trigger: AGACCTGGAGGCACTGAGGCACGCCCTGGAGCTGGA...CAGTGACCATCTCAGAAGCCGTCCATCAGTCCAAATGGGGGTTCTGAGAAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp AGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTGGTCCAGCTCCAGGGCGTaGCTCAGTGCCTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: RLRASPFPQSQILRSQCWSSSRA*LSASRS
Trigger: AGACCTGGAGGCACTGAGGCACGCCCTGGAGCTGGA...CCAACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp GTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCAACATCTGGGTCTCTGGAGTTCCATAGGCTTGTGCTaGAGGTGGGTAAGCTGTATA +
Preference number: 4 (lower is better)
Translates to: VVSAVGPLPGVQHLGLWSSIGLC*RWVSCI
Trigger: TATACAGCTTACCCACCTCCAGCACAAGCCTATGGA...ACTCCAGAGACCCAGATGTTGGACACCAGGAAGGGGCCCCACAGCCGAGACGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp ACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTGGGTGGACGTAGGTGGACGTaGAGAGGGGCGAAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: TPSQPFSPKSNTPKPMLGGRRWT*RGAKGR
Trigger: TCTGCCCTTCGCCCCTCTCCACGTCCACCTACGTCC...ACCCAACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp TTCCTTCTCAGAACCCCCATTTGGACTGATGGACGGCTTCTGAGATGGTCACTGCCTGGAGGACGTAGGTaGACGTGGAGAGGGGCGAAG +
Preference number: 4 (lower is better)
Translates to: FLLRTPIWTDGRLLRWSLPGGRR*TWRGAK
Trigger: CTTCGCCCCTCTCCACGTCCACCTACGTCCTCCAGG...CAGTGACCATCTCAGAAGCCGTCCATCAGTCCAAATGGGGGTTCTGAGAAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp ACTGATGGACGGCTTCTGAGATGGTCACTGGACACGTCGTCTCGGCTGTGGGGCCCTCTTTCGCTGGTGTaGAAGGTCCATTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: TDGRLLRWSLDTSSRLWGPLSLV*KVHCVC
Trigger: ACACACACAATGGACCTTCCACACCAGCGAAAGAGG...GCCCCACAGCCGAGACGACGTGTCCAGTGACCATCTCAGAAGCCGTCCATCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp TTCCTTCTCAGAACCCCCATTTGGACTGATGGACGGCTTCTGAGATGGTCACTGCCTGGGGCCGAACTGTaGAAGCCGTCAGCGGAGAAG +
Preference number: 4 (lower is better)
Translates to: FLLRTPIWTDGRLLRWSLPGAEL*KPSAEK
Trigger: CTTCTCCGCTGACGGCTTCCACAGTTCGGCCCCAGG...CAGTGACCATCTCAGAAGCCGTCCATCAGTCCAAATGGGGGTTCTGAGAAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp AGAACCCCCATTTGGACTGATGGACGGCTTCTGAGATGGTCACTGGACACGTCGGCCTCCAGGTCTGCGTaGCAGGATATCCGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: RTPIWTDGRLLRWSLDTSASRSA*QDIRQK
Trigger: TTTCTGGCGGATATCCTGCCACGCAGACCTGGAGGC...CGACGTGTCCAGTGACCATCTCAGAAGCCGTCCATCAGTCCAAATGGGGGTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp TGTTCTGTGAGTCTTACAGAAGAGTCTAGACTCCGAGCCAGCCCTTTTCCCCAATTCTCGGTGGGGAGGTaGGGAAGGCGAGGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: CSVSLTEESRLRASPFPQFSVGR*GRRGGL
Trigger: CAGACCCCCTCGCCTTCCCCACCTCCCCACCGAGAA...TTGGGGAAAAGGGCTGGCTCGGAGTCTAGACTCTTCTGTAAGACTCACAGAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp ACTGGACACGTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCAACATCTGGGTGAGACGTCATCAACGTaGATCTGGTCACAATCCTTC +
Preference number: 4 (lower is better)
Translates to: TGHVVSAVGPLPGVQHLGETSST*IWSQSF
Trigger: GAAGGATTGTGACCAGATCCACGTTGATGACGTCTC...ACCCAGATGTTGGACACCAGGAAGGGGCCCCACAGCCGAGACGACGTGTCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611592.4
CDS-3UTR TCA 90 bp CTAGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTGCTCTGTCCAGTGGGTaGGGTGCTGAAGCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: LDSEPALFPKVKYSEANVALSSG*GAEAGA
Trigger: GGCTCCAGCTTCAGCACCTCACCCACTGGACAGAGC...AACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000611592.4
CDS-3UTR TCA 90 bp AGAACCCCCATTTGGACTGATGGACGGCTTCTGAGATGGTCACTGGACACGTCGGGGAGGGTTGTAGGATaGGCCGTAATACTGGGGGTA +
Preference number: 4 (lower is better)
Translates to: RTPIWTDGRLLRWSLDTSGRVVG*AVILGV
Trigger: TACCCCCAGTATTACGGCTCATCCTACAACCCTCCC...CGACGTGTCCAGTGACCATCTCAGAAGCCGTCCATCAGTCCAAATGGGGGTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR TCA 90 bp ACTGATGGACGGCTTCTGAGATGGTCACTGGACACGTCGTCTCGGCTGTGGGGCAGGTGGAGATGCTGCTaGTCCTGCTATAAATACTCC +
Preference number: 4 (lower is better)
Translates to: TDGRLLRWSLDTSSRLWGRWRCC*SCYKYS
Trigger: GGAGTATTTATAGCAGGATCAGCAGCATCTCCACCT...GCCCCACAGCCGAGACGACGTGTCCAGTGACCATCTCAGAAGCCGTCCATCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR TCA 90 bp CTGAGATGGTCACTGGACACGTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCGTCTTTTCAACAGCTTaGACTGCCTTCCTCTCTAAT +
Preference number: 4 (lower is better)
Translates to: LRWSLDTSSRLWGPFLVSVFSTA*TAFLSN
Trigger: ATTAGAGAGGAAGGCAGTTCAAGCTGTTGAAAAGAC...GGACACCAGGAAGGGGCCCCACAGCCGAGACGACGTGTCCAGTGACCATCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR TCA 90 bp AGAACCCCCATTTGGACTGATGGACGGCTTCTGAGATGGTCACTGGACACGTCGCAGTGGGTGAGGTGCTaGAGGAAGGGATTCCATAGG +
Preference number: 4 (lower is better)
Translates to: RTPIWTDGRLLRWSLDTSQWVRC*RKGFHR
Trigger: CCTATGGAATCCCTTCCTTCAGCACCTCACCCACTG...CGACGTGTCCAGTGACCATCTCAGAAGCCGTCCATCAGTCCAAATGGGGGTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497062.6
CDS-3UTR GCA 90 bp ATACTCCGAAGCCAATGTTGGGTACTTTCCTTCTCAGAACCCCCATTTGGACTGTGCTGTCTCTGCCGTTaGCGCTGCCTCCGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: ILRSQCWVLSFSEPPFGLCCLCR*RCLRLL
Trigger: CAGGAGGCGGAGGCAGCGGCAACGGCAGAGACAGCA...CAGTCCAAATGGGGGTTCTGAGAAGGAAAGTACCCAACATTGGCTTCGGAGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000611592.4
CDS-3UTR GCA 90 bp ATACTCCGAAGCCAATGTTGGGTACTTTCCTTCTCAGAACCCCCATTTGGACTGGCGAAGGGCAGATGCTaGTGGCCGGGACGTAGGGAG +
Preference number: 4 (lower is better)
Translates to: ILRSQCWVLSFSEPPFGLAKGRC*WPGRRE
Trigger: CTCCCTACGTCCCGGCCAGCAGCATCTGCCCTTCGC...CAGTCCAAATGGGGGTTCTGAGAAGGAAAGTACCCAACATTGGCTTCGGAGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp GTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCAACATCTGGGTCTCTGGAGTCGTAGACAGCTTTTCTaGCGAATCTCTGCATTATCC +
Preference number: 4 (lower is better)
Translates to: VVSAVGPLPGVQHLGLWSRRQLF*RISALS
Trigger: GGATAATGCAGAGATTCGGCAGAAAAGCTGTCTACG...ACTCCAGAGACCCAGATGTTGGACACCAGGAAGGGGCCCCACAGCCGAGACGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp CGGCTGTGGGGCCCCTTCCTGGTGTCCAACATCTGGGTCTCTGGAGTTCTCGGTCGTAGACAGCTTTTCTaGCGAATCTCTGCATTATCC +
Preference number: 4 (lower is better)
Translates to: RLWGPFLVSNIWVSGVLGRRQLF*RISALS
Trigger: GGATAATGCAGAGATTCGGCAGAAAAGCTGTCTACG...ACCGAGAACTCCAGAGACCCAGATGTTGGACACCAGGAAGGGGCCCCACAGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp GCCTTCCTCTCTAATGTTCAAAGAATGATTGTCCCCACAAAGCACAACTTGGAGTTGTACCGCGCGCAGTaGAGAGGGCGCCCCGACGCG +
Preference number: 4 (lower is better)
Translates to: AFLSNVQRMIVPTKHNLELYRAQ*RGRPDA
Trigger: CGCGTCGGGGCGCCCTCTCCACTGCGCGCGGTACAA...CTCCAAGTTGTGCTTTGTGGGGACAATCATTCTTTGAACATTAGAGAGGAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp ACTGATGGACGGCTTCTGAGATGGTCACTGGACACGTCGTCTCGGCTGTGGGGCTCCATAGGCTTGTGCTaGAGGTGGGTAAGCTGTATA +
Preference number: 4 (lower is better)
Translates to: TDGRLLRWSLDTSSRLWGSIGLC*RWVSCI
Trigger: TATACAGCTTACCCACCTCCAGCACAAGCCTATGGA...GCCCCACAGCCGAGACGACGTGTCCAGTGACCATCTCAGAAGCCGTCCATCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp TGTTCTGTGAGTCTTACAGAAGAGTCTAGACTCCGAGCCAGCCCTTTTCCCCAAAAGGGCAGATGCTGCTaGCCGGGACGTAGGGAGGGT +
Preference number: 4 (lower is better)
Translates to: CSVSLTEESRLRASPFPQKGRCC*PGRREG
Trigger: ACCCTCCCTACGTCCCGGCCAGCAGCATCTGCCCTT...TTGGGGAAAAGGGCTGGCTCGGAGTCTAGACTCTTCTGTAAGACTCACAGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp TGTTCTGTGAGTCTTACAGAAGAGTCTAGACTCCGAGCCAGCCCTTTTCCCCAAGGACGTAGGTGGACGTaGAGAGGGGCGAAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: CSVSLTEESRLRASPFPQGRRWT*RGAKGR
Trigger: TCTGCCCTTCGCCCCTCTCCACGTCCACCTACGTCC...TTGGGGAAAAGGGCTGGCTCGGAGTCTAGACTCTTCTGTAAGACTCACAGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp CTAGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTCCTGGAGGACGTAGGTaGACGTGGAGAGGGGCGAAG +
Preference number: 4 (lower is better)
Translates to: LDSEPALFPKVKYSEANVPGGRR*TWRGAK
Trigger: CTTCGCCCCTCTCCACGTCCACCTACGTCCTCCAGG...AACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp ACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTGGGTTGCGCACGGACGTCGTaGTGTCCTTCCCGTATCTGG +
Preference number: 4 (lower is better)
Translates to: TPSQPFSPKSNTPKPMLGCARTS*CPSRIW
Trigger: CCAGATACGGGAAGGACACCACGACGTCCGTGCGCA...ACCCAACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
CDS-3UTR CCA 90 bp CTAGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTAGCCCAGGCACAGGTTaGCTCCTGGGGCCGAACTGT +
Preference number: 4 (lower is better)
Translates to: LDSEPALFPKVKYSEANVSPGTG*LLGPNC
Trigger: ACAGTTCGGCCCCAGGAGCCAACCTGTGCCTGGGCT...AACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp ACAGAAGAGTCTAGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCCAGGCACAGGTTaGCTCCTGGGGCCGAACTGT +
Preference number: 4 (lower is better)
Translates to: TEESRLRASPFPQSQILRSPGTG*LLGPNC
Trigger: ACAGTTCGGCCCCAGGAGCCAACCTGTGCCTGGGCT...TCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCTAGACTCTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp ACTGGACACGTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCAACATCTGGGTCATATAGCAGGACTTTaGCCAGGGCAGGAATTAGTT +
Preference number: 4 (lower is better)
Translates to: TGHVVSAVGPLPGVQHLGHIAGL*PGQELV
Trigger: AACTAATTCCTGCCCTGGCCAAAGTCCTGCTATATG...ACCCAGATGTTGGACACCAGGAAGGGGCCCCACAGCCGAGACGACGTGTCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000497062.6
ENST00000611592.4
CDS-3UTR TCA 90 bp ACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTGGGTAGCTGGAGCCATAGCTaGGGAATCCACTCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: TPSQPFSPKSNTPKPMLGSWSHS*GIHSGQ
Trigger: CTGGCCAGAGTGGATTCCTCAGCTATGGCTCCAGCT...ACCCAACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000611592.4
CDS-3UTR TCA 90 bp CGGCTGTGGGGCCCCTTCCTGGTGTCCAACATCTGGGTCTCTGGAGTTCTCGGTAATCCTCCAGGTCATTaGAGAACAGATGTGTATCTG +
Preference number: 4 (lower is better)
Translates to: RLWGPFLVSNIWVSGVLGNPPGH*RTDVYL
Trigger: CAGATACACATCTGTTCTTCAATGACCTGGAGGATT...ACCGAGAACTCCAGAGACCCAGATGTTGGACACCAGGAAGGGGCCCCACAGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
CDS-3UTR TCA 90 bp GTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCAACATCTGGGTCTCTGGAGTAATCCTCCAGGTCATTaGAGAACAGATGTGTATCTG +
Preference number: 4 (lower is better)
Translates to: VVSAVGPLPGVQHLGLWSNPPGH*RTDVYL
Trigger: CAGATACACATCTGTTCTTCAATGACCTGGAGGATT...ACTCCAGAGACCCAGATGTTGGACACCAGGAAGGGGCCCCACAGCCGAGACGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
CDS-3UTR TCA 90 bp ACTGGACACGTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCAACATCTGGGTAATCCTCCAGGTCATTaGAGAACAGATGTGTATCTG +
Preference number: 4 (lower is better)
Translates to: TGHVVSAVGPLPGVQHLGNPPGH*RTDVYL
Trigger: CAGATACACATCTGTTCTTCAATGACCTGGAGGATT...ACCCAGATGTTGGACACCAGGAAGGGGCCCCACAGCCGAGACGACGTGTCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
CDS-3UTR TCA 90 bp ACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTGGGTTCAGCCAGAGGTCTGTaGGAGCTTCCAGCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: TPSQPFSPKSNTPKPMLGSARGL*ELPAQL
Trigger: GAGCTGAGCTGGAAGCTCTCACAGACCTCTGGCTGA...ACCCAACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp ACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTGGGTACTCCCGAAACCGGCTaGGTTGCCCAGTCCATTTCC +
Preference number: 4 (lower is better)
Translates to: TPSQPFSPKSNTPKPMLGTPETG*VAQSIS
Trigger: GGAAATGGACTGGGCAACGCAGCCGGTTTCGGGAGT...ACCCAACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp TTCCTTCTCAGAACCCCCATTTGGACTGATGGACGGCTTCTGAGATGGTCACTGACTCCCGAAACCGGCTaGGTTGCCCAGTCCATTTCC +
Preference number: 4 (lower is better)
Translates to: FLLRTPIWTDGRLLRWSLTPETG*VAQSIS
Trigger: GGAAATGGACTGGGCAACGCAGCCGGTTTCGGGAGT...CAGTGACCATCTCAGAAGCCGTCCATCAGTCCAAATGGGGGTTCTGAGAAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp GCCTTCCTCTCTAATGTTCAAAGAATGATTGTCCCCACAAAGCACAACTTGGAGGGGGCGAAGGGCAGATaGTGCTGGCCGGGACGTAGG +
Preference number: 4 (lower is better)
Translates to: AFLSNVQRMIVPTKHNLEGAKGR*CWPGRR
Trigger: CCTACGTCCCGGCCAGCAGCATCTGCCCTTCGCCCC...CTCCAAGTTGTGCTTTGTGGGGACAATCATTCTTTGAACATTAGAGAGGAAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp TTCCTTCTCAGAACCCCCATTTGGACTGATGGACGGCTTCTGAGATGGTCACTGGGGGACGTTGTGAGATaGCTCCTGGAGGACGTAGGT +
Preference number: 4 (lower is better)
Translates to: FLLRTPIWTDGRLLRWSLGDVVR*LLEDVG
Trigger: ACCTACGTCCTCCAGGAGGCATCTCACAACGTCCCC...CAGTGACCATCTCAGAAGCCGTCCATCAGTCCAAATGGGGGTTCTGAGAAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp ACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTGGGTGGGGACGTTGTGAGATaGCTCCTGGAGGACGTAGGT +
Preference number: 4 (lower is better)
Translates to: TPSQPFSPKSNTPKPMLGGDVVR*LLEDVG
Trigger: ACCTACGTCCTCCAGGAGGCATCTCACAACGTCCCC...ACCCAACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp ACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTGGGTAATCTCATTGTCCCCTaGCGGGGACGGGTCACTGCT +
Preference number: 4 (lower is better)
Translates to: TPSQPFSPKSNTPKPMLGNLIVP*RGRVTA
Trigger: AGCAGTGACCCGTCCCCGGCAGGGGACAATGAGATT...ACCCAACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp CGGCTGTGGGGCCCCTTCCTGGTGTCCAACATCTGGGTCTCTGGAGTTCTCGGTCTTCCCTGTCTTGGTTaGACTGTAGATGTTCTCAAT +
Preference number: 4 (lower is better)
Translates to: RLWGPFLVSNIWVSGVLGLPCLG*TVDVLN
Trigger: ATTGAGAACATCTACAGTGCAACCAAGACAGGGAAG...ACCGAGAACTCCAGAGACCCAGATGTTGGACACCAGGAAGGGGCCCCACAGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp CTAGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTCAGTGCCTCCAGGTCTaGGTGGCAGGATATCCGCCA +
Preference number: 4 (lower is better)
Translates to: LDSEPALFPKVKYSEANVQCLQV*VAGYPP
Trigger: TGGCGGATATCCTGCCACGCAGACCTGGAGGCACTG...AACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp ACAGAAGAGTCTAGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAGCGGGGGAGGACACGTaGGCAAGATCTGGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: TEESRLRASPFPQSQILRAGEDT*ARSGEE
Trigger: CTCTTCTCCAGATCTTGCCCACGTGTCCTCCCCCGC...TCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCTAGACTCTTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp TGTTCTGTGAGTCTTACAGAAGAGTCTAGACTCCGAGCCAGCCCTTTTCCCCAAGCGGGGGAGGACACGTaGGCAAGATCTGGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: CSVSLTEESRLRASPFPQAGEDT*ARSGEE
Trigger: CTCTTCTCCAGATCTTGCCCACGTGTCCTCCCCCGC...TTGGGGAAAAGGGCTGGCTCGGAGTCTAGACTCTTCTGTAAGACTCACAGAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp AGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTGGTGTGGGGCCCCTTCCTaGTGTCCAACATCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: RLRASPFPQSQILRSQCWCGAPS*CPTSGS
Trigger: AGACCCAGATGTTGGACACCAGGAAGGGGCCCCACA...CCAACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp ACTGATGGACGGCTTCTGAGATGGTCACTGGACACGTCGTCTCGGCTGTGGGGCCTCCGAAGCCAATGTTaGGTACTTTCCTTCTCAGAA +
Preference number: 4 (lower is better)
Translates to: TDGRLLRWSLDTSSRLWGLRSQC*VLSFSE
Trigger: TTCTGAGAAGGAAAGTACCCAACATTGGCTTCGGAG...GCCCCACAGCCGAGACGACGTGTCCAGTGACCATCTCAGAAGCCGTCCATCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR TCA 90 bp CTAGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTAGCTGGAGCCATAGCTaGGGAATCCACTCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: LDSEPALFPKVKYSEANVSWSHS*GIHSGQ
Trigger: CTGGCCAGAGTGGATTCCTCAGCTATGGCTCCAGCT...AACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000611592.4
CDS-3UTR TCA 90 bp TGTTCTGTGAGTCTTACAGAAGAGTCTAGACTCCGAGCCAGCCCTTTTCCCCAAAGCTGGAGCCATAGCTaGGGAATCCACTCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: CSVSLTEESRLRASPFPQSWSHS*GIHSGQ
Trigger: CTGGCCAGAGTGGATTCCTCAGCTATGGCTCCAGCT...TTGGGGAAAAGGGCTGGCTCGGAGTCTAGACTCTTCTGTAAGACTCACAGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000611592.4
CDS-3UTR TCA 90 bp ACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTGGGTGGGAGGGTTGTAGGATaGGCCGTAATACTGGGGGTA +
Preference number: 4 (lower is better)
Translates to: TPSQPFSPKSNTPKPMLGGRVVG*AVILGV
Trigger: TACCCCCAGTATTACGGCTCATCCTACAACCCTCCC...ACCCAACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR TCA 90 bp GTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCAACATCTGGGTCTCTGGAGTCTAATGTTCAAAGAATaGTTGTCCCCACAAAGCACA +
Preference number: 4 (lower is better)
Translates to: VVSAVGPLPGVQHLGLWSLMFKE*LSPQST
Trigger: TGTGCTTTGTGGGGACAATCATTCTTTGAACATTAG...ACTCCAGAGACCCAGATGTTGGACACCAGGAAGGGGCCCCACAGCCGAGACGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR TCA 90 bp ACTGGACACGTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCAACATCTGGGTCTAATGTTCAAAGAATaGTTGTCCCCACAAAGCACA +
Preference number: 4 (lower is better)
Translates to: TGHVVSAVGPLPGVQHLGLMFKE*LSPQST
Trigger: TGTGCTTTGTGGGGACAATCATTCTTTGAACATTAG...ACCCAGATGTTGGACACCAGGAAGGGGCCCCACAGCCGAGACGACGTGTCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp TGTTCTGTGAGTCTTACAGAAGAGTCTAGACTCCGAGCCAGCCCTTTTCCCCAAAATCTCATTGTCCCCTaGCGGGGACGGGTCACTGCT +
Preference number: 4 (lower is better)
Translates to: CSVSLTEESRLRASPFPQNLIVP*RGRVTA
Trigger: AGCAGTGACCCGTCCCCGGCAGGGGACAATGAGATT...TTGGGGAAAAGGGCTGGCTCGGAGTCTAGACTCTTCTGTAAGACTCACAGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp CTAGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTAATCTCATTGTCCCCTaGCGGGGACGGGTCACTGCT +
Preference number: 4 (lower is better)
Translates to: LDSEPALFPKVKYSEANVNLIVP*RGRVTA
Trigger: AGCAGTGACCCGTCCCCGGCAGGGGACAATGAGATT...AACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp ATACTCCGAAGCCAATGTTGGGTACTTTCCTTCTCAGAACCCCCATTTGGACTGGCGGGGGAGGACACGTaGGCAAGATCTGGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: ILRSQCWVLSFSEPPFGLAGEDT*ARSGEE
Trigger: CTCTTCTCCAGATCTTGCCCACGTGTCCTCCCCCGC...CAGTCCAAATGGGGGTTCTGAGAAGGAAAGTACCCAACATTGGCTTCGGAGTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp GGCACGTGCACTGTCCACATGACGTCAAGTAGGTCTTTAAAAACAAAAATAAGCGGCCGTAGGCTGCCATaGCTGTGGAAGGCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: GTCTVHMTSSRSLKTKISGRRLP*LWKAGG
Trigger: CCCGCCAGCCTTCCACAGCCATGGCAGCCTACGGCC...GCTTATTTTTGTTTTTAAAGACCTACTTGACGTCATGTGGACAGTGCACGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp AGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTGGGCCAGGTCTCCCTTTTaGGAGTGCCTATCAACCCAC +
Preference number: 4 (lower is better)
Translates to: RLRASPFPQSQILRSQCWARSPF*ECLSTH
Trigger: GTGGGTTGATAGGCACTCCCAAAAGGGAGACCTGGC...CCAACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp TGTTCTGTGAGTCTTACAGAAGAGTCTAGACTCCGAGCCAGCCCTTTTCCCCAAAGTGCCTTCAGGGAGTaGGTCAGCCAGAGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: CSVSLTEESRLRASPFPQSAFRE*VSQRSV
Trigger: CACAGACCTCTGGCTGACCCACTCCCTGAAGGCACT...TTGGGGAAAAGGGCTGGCTCGGAGTCTAGACTCTTCTGTAAGACTCACAGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp CTAGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTTGTGGGGCCCCTTCCTaGTGTCCAACATCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: LDSEPALFPKVKYSEANVCGAPS*CPTSGS
Trigger: AGACCCAGATGTTGGACACCAGGAAGGGGCCCCACA...AACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp TGTTCTGTGAGTCTTACAGAAGAGTCTAGACTCCGAGCCAGCCCTTTTCCCCAATGTGGGGCCCCTTCCTaGTGTCCAACATCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: CSVSLTEESRLRASPFPQCGAPS*CPTSGS
Trigger: AGACCCAGATGTTGGACACCAGGAAGGGGCCCCACA...TTGGGGAAAAGGGCTGGCTCGGAGTCTAGACTCTTCTGTAAGACTCACAGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp TTCCTTCTCAGAACCCCCATTTGGACTGATGGACGGCTTCTGAGATGGTCACTGGGACGGCTTCTGAGATaGTCACTGGACACGTCGTCT +
Preference number: 4 (lower is better)
Translates to: FLLRTPIWTDGRLLRWSLGRLLR*SLDTSS
Trigger: AGACGACGTGTCCAGTGACCATCTCAGAAGCCGTCC...CAGTGACCATCTCAGAAGCCGTCCATCAGTCCAAATGGGGGTTCTGAGAAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR TCA 90 bp GCCTTCCTCTCTAATGTTCAAAGAATGATTGTCCCCACAAAGCACAACTTGGAGGCTCTGTCCAGTGGGTaGGGTGCTGAAGCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: AFLSNVQRMIVPTKHNLEALSSG*GAEAGA
Trigger: GGCTCCAGCTTCAGCACCTCACCCACTGGACAGAGC...CTCCAAGTTGTGCTTTGTGGGGACAATCATTCTTTGAACATTAGAGAGGAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000611592.4
CDS-3UTR TCA 90 bp TTCCTTCTCAGAACCCCCATTTGGACTGATGGACGGCTTCTGAGATGGTCACTGGTATTCACCAGCAAGTaGCTCGGAACTCTGGTTGGG +
Preference number: 4 (lower is better)
Translates to: FLLRTPIWTDGRLLRWSLVFTSK*LGTLVG
Trigger: CCCAACCAGAGTTCCGAGTCACTTGCTGGTGAATAC...CAGTGACCATCTCAGAAGCCGTCCATCAGTCCAAATGGGGGTTCTGAGAAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR TCA 90 bp ACAGAAGAGTCTAGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGACTGATGGACGGCTTCTaGGATGGTCACTGGACACGT +
Preference number: 4 (lower is better)
Translates to: TEESRLRASPFPQSQILRLMDGF*DGHWTR
Trigger: ACGTGTCCAGTGACCATCTCAGAAGCCGTCCATCAG...TCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCTAGACTCTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR TCA 90 bp ACTGATGGACGGCTTCTGAGATGGTCACTGGACACGTCGTCTCGGCTGTGGGGCCTTGCTTTTGTTCTGTaGGTCTTACAGAAGAGTCTA +
Preference number: 4 (lower is better)
Translates to: TDGRLLRWSLDTSSRLWGLAFVL*VLQKSL
Trigger: TAGACTCTTCTGTAAGACTCACAGAACAAAAGCAAG...GCCCCACAGCCGAGACGACGTGTCCAGTGACCATCTCAGAAGCCGTCCATCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp ATACTCCGAAGCCAATGTTGGGTACTTTCCTTCTCAGAACCCCCATTTGGACTGGGGGACGTTGTGAGATaGCTCCTGGAGGACGTAGGT +
Preference number: 4 (lower is better)
Translates to: ILRSQCWVLSFSEPPFGLGDVVR*LLEDVG
Trigger: ACCTACGTCCTCCAGGAGGCATCTCACAACGTCCCC...CAGTCCAAATGGGGGTTCTGAGAAGGAAAGTACCCAACATTGGCTTCGGAGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp AGAATGATTGTCCCCACAAAGCACAACTTGGAGAATAGAGTGCTTACATTAGAACCGTCGGAGGCCCGGTaGGGCCTGTCTGTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: RMIVPTKHNLENRVLTLEPSEAR*GLSVSP
Trigger: GGGAGACACAGACAGGCCGCACCGGGCCTCCGACGG...TTCTAATGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGGGACAATCATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp TGTTCTGTGAGTCTTACAGAAGAGTCTAGACTCCGAGCCAGCCCTTTTCCCCAAGGCTTGTGCTGGAGGTaGGTAAGCTGTATAGGGGGT +
Preference number: 4 (lower is better)
Translates to: CSVSLTEESRLRASPFPQGLCWR*VSCIGG
Trigger: ACCCCCTATACAGCTTACCCACCTCCAGCACAAGCC...TTGGGGAAAAGGGCTGGCTCGGAGTCTAGACTCTTCTGTAAGACTCACAGAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp ACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTGGGTCTCTGGCCAGGGGAATaGTTCAAGCTGTCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: TPSQPFSPKSNTPKPMLGLWPGE*FKLSSV
Trigger: GACAGAAGACAGCTTGAACCATTCCCCTGGCCAGAG...ACCCAACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000611592.4
CDS-3UTR CCA 90 bp TTCCTTCTCAGAACCCCCATTTGGACTGATGGACGGCTTCTGAGATGGTCACTGCTCTGGCCAGGGGAATaGTTCAAGCTGTCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: FLLRTPIWTDGRLLRWSLLWPGE*FKLSSV
Trigger: GACAGAAGACAGCTTGAACCATTCCCCTGGCCAGAG...CAGTGACCATCTCAGAAGCCGTCCATCAGTCCAAATGGGGGTTCTGAGAAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000611592.4
CDS-3UTR CCA 90 bp TTCCTTCTCAGAACCCCCATTTGGACTGATGGACGGCTTCTGAGATGGTCACTGCTGAGGAATCCACTCTaGCCAGGGGAATGGTTCAAG +
Preference number: 4 (lower is better)
Translates to: FLLRTPIWTDGRLLRWSLLRNPL*PGEWFK
Trigger: CTTGAACCATTCCCCTGGCCAGAGTGGATTCCTCAG...CAGTGACCATCTCAGAAGCCGTCCATCAGTCCAAATGGGGGTTCTGAGAAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000611592.4
CDS-3UTR CCA 90 bp AGAACCCCCATTTGGACTGATGGACGGCTTCTGAGATGGTCACTGGACACGTCGTCATCAACGTGGATCTaGTCACAATCCTCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: RTPIWTDGRLLRWSLDTSSSTWI*SQSSRS
Trigger: TGACCTGGAGGATTGTGACCAGATCCACGTTGATGA...CGACGTGTCCAGTGACCATCTCAGAAGCCGTCCATCAGTCCAAATGGGGGTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
CDS-3UTR CCA 90 bp CCAGCCACACAGGTACAAGAGCATAATTCCGGAGTAATGAGACTAGTCCATAAACCTGGGGCCGAACTGTaGAAGCCGTCAGCGGAGAAG +
Preference number: 4 (lower is better)
Translates to: PATQVQEHNSGVMRLVHKPGAEL*KPSAEK
Trigger: CTTCTCCGCTGACGGCTTCCACAGTTCGGCCCCAGG...TTTATGGACTAGTCTCATTACTCCGGAATTATGCTCTTGTACCTGTGTGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp TGTTCTGTGAGTCTTACAGAAGAGTCTAGACTCCGAGCCAGCCCTTTTCCCCAAGCCAGGTCTCCCTTTTaGGAGTGCCTATCAACCCAC +
Preference number: 4 (lower is better)
Translates to: CSVSLTEESRLRASPFPQARSPF*ECLSTH
Trigger: GTGGGTTGATAGGCACTCCCAAAAGGGAGACCTGGC...TTGGGGAAAAGGGCTGGCTCGGAGTCTAGACTCTTCTGTAAGACTCACAGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp CTAGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTCAACATCTGGGTCTCTaGAGTTCTCGGTGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: LDSEPALFPKVKYSEANVQHLGL*SSRWGG
Trigger: ACCTCCCCACCGAGAACTCCAGAGACCCAGATGTTG...AACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp ACAGAAGAGTCTAGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGACAACATCTGGGTCTCTaGAGTTCTCGGTGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: TEESRLRASPFPQSQILRQHLGL*SSRWGG
Trigger: ACCTCCCCACCGAGAACTCCAGAGACCCAGATGTTG...TCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCTAGACTCTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp ACAGAAGAGTCTAGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAGGACGGCTTCTGAGATaGTCACTGGACACGTCGTCT +
Preference number: 4 (lower is better)
Translates to: TEESRLRASPFPQSQILRGRLLR*SLDTSS
Trigger: AGACGACGTGTCCAGTGACCATCTCAGAAGCCGTCC...TCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCTAGACTCTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR TCA 90 bp CCAGCCACACAGGTACAAGAGCATAATTCCGGAGTAATGAGACTAGTCCATAAATGGTTGGGGACGTTGTaGGATGCCTCCTGGAGGACG +
Preference number: 4 (lower is better)
Translates to: PATQVQEHNSGVMRLVHKWLGTL*DASWRT
Trigger: CGTCCTCCAGGAGGCATCTCACAACGTCCCCAACCA...TTTATGGACTAGTCTCATTACTCCGGAATTATGCTCTTGTACCTGTGTGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR TCA 90 bp ACAGAAGAGTCTAGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAGTATTCACCAGCAAGTaGCTCGGAACTCTGGTTGGG +
Preference number: 4 (lower is better)
Translates to: TEESRLRASPFPQSQILRVFTSK*LGTLVG
Trigger: CCCAACCAGAGTTCCGAGTCACTTGCTGGTGAATAC...TCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCTAGACTCTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR TCA 90 bp TGTTCTGTGAGTCTTACAGAAGAGTCTAGACTCCGAGCCAGCCCTTTTCCCCAAGTATTCACCAGCAAGTaGCTCGGAACTCTGGTTGGG +
Preference number: 4 (lower is better)
Translates to: CSVSLTEESRLRASPFPQVFTSK*LGTLVG
Trigger: CCCAACCAGAGTTCCGAGTCACTTGCTGGTGAATAC...TTGGGGAAAAGGGCTGGCTCGGAGTCTAGACTCTTCTGTAAGACTCACAGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp ACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTGGGTGATTCCATAGGCTTGTaGTGGAGGTGGGTAAGCTGT +
Preference number: 4 (lower is better)
Translates to: TPSQPFSPKSNTPKPMLGDSIGL*WRWVSC
Trigger: ACAGCTTACCCACCTCCAGCACAAGCCTATGGAATC...ACCCAACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp TTCCTTCTCAGAACCCCCATTTGGACTGATGGACGGCTTCTGAGATGGTCACTGGATTCCATAGGCTTGTaGTGGAGGTGGGTAAGCTGT +
Preference number: 4 (lower is better)
Translates to: FLLRTPIWTDGRLLRWSLDSIGL*WRWVSC
Trigger: ACAGCTTACCCACCTCCAGCACAAGCCTATGGAATC...CAGTGACCATCTCAGAAGCCGTCCATCAGTCCAAATGGGGGTTCTGAGAAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp CTAGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTACTCGGAACTCTGGTTaGGGACGTTGTGAGATGCCT +
Preference number: 4 (lower is better)
Translates to: LDSEPALFPKVKYSEANVTRNSG*GRCEMP
Trigger: AGGCATCTCACAACGTCCCCAACCAGAGTTCCGAGT...AACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp ACAGAAGAGTCTAGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAGTCTCCCTCTTTCGCTaGTGTGGAAGGTCCATTGTG +
Preference number: 4 (lower is better)
Translates to: TEESRLRASPFPQSQILRVSLFR*CGRSIV
Trigger: CACAATGGACCTTCCACACCAGCGAAAGAGGGAGAC...TCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCTAGACTCTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp CCAGCCACACAGGTACAAGAGCATAATTCCGGAGTAATGAGACTAGTCCATAAATGCGCACGGACGTCGTaGTGTCCTTCCCGTATCTGG +
Preference number: 4 (lower is better)
Translates to: PATQVQEHNSGVMRLVHKCARTS*CPSRIW
Trigger: CCAGATACGGGAAGGACACCACGACGTCCGTGCGCA...TTTATGGACTAGTCTCATTACTCCGGAATTATGCTCTTGTACCTGTGTGGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
CDS-3UTR CCA 90 bp AGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTGGGAGACGTCATCAACGTaGATCTGGTCACAATCCTCC +
Preference number: 4 (lower is better)
Translates to: RLRASPFPQSQILRSQCWETSST*IWSQSS
Trigger: GGAGGATTGTGACCAGATCCACGTTGATGACGTCTC...CCAACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
CDS-3UTR CCA 90 bp GGCACGTGCACTGTCCACATGACGTCAAGTAGGTCTTTAAAAACAAAAATAAGCGCACAGGTTGGCTCCTaGGGCCGAACTGTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: GTCTVHMTSSRSLKTKISAQVGS*GRTVEA
Trigger: GGCTTCCACAGTTCGGCCCCAGGAGCCAACCTGTGC...GCTTATTTTTGTTTTTAAAGACCTACTTGACGTCATGTGGACAGTGCACGTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR TCA 90 bp AGAACCCCCATTTGGACTGATGGACGGCTTCTGAGATGGTCACTGGACACGTCGGTGTATCTGCAAGGTTaGAGATCATCTCTTCCATCA +
Preference number: 4 (lower is better)
Translates to: RTPIWTDGRLLRWSLDTSVYLQG*RSSLPS
Trigger: TGATGGAAGAGATGATCTTCAACCTTGCAGATACAC...CGACGTGTCCAGTGACCATCTCAGAAGCCGTCCATCAGTCCAAATGGGGGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
CDS-3UTR GCA 90 bp GTTCAAAGAATGATTGTCCCCACAAAGCACAACTTGGAGAATAGAGTGCTTACACGTCTGGCCGTAGGCTaGCATGGCTGTGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: VQRMIVPTKHNLENRVLTRLAVG*HGCGRL
Trigger: CAGCCTTCCACAGCCATGGCAGCCTACGGCCAGACG...TGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGGGACAATCATTCTTTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp CTAGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTGATTCCATAGGCTTGTaGTGGAGGTGGGTAAGCTGT +
Preference number: 4 (lower is better)
Translates to: LDSEPALFPKVKYSEANVDSIGL*WRWVSC
Trigger: ACAGCTTACCCACCTCCAGCACAAGCCTATGGAATC...AACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp GCCTTCCTCTCTAATGTTCAAAGAATGATTGTCCCCACAAAGCACAACTTGGAGACTCCCGAAACCGGCTaGGTTGCCCAGTCCATTTCC +
Preference number: 4 (lower is better)
Translates to: AFLSNVQRMIVPTKHNLETPETG*VAQSIS
Trigger: GGAAATGGACTGGGCAACGCAGCCGGTTTCGGGAGT...CTCCAAGTTGTGCTTTGTGGGGACAATCATTCTTTGAACATTAGAGAGGAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp ACACAGGTACAAGAGCATAATTCCGGAGTAATGAGACTAGTCCATAAATTAAAACAGTCCACGCCGCCGTaGACGCCAGAGCCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: TQVQEHNSGVMRLVHKLKQSTPP*TPEPRH
Trigger: GTGCCTGGGCTCTGGCGTGCACGGCGGCGTGGACTG...TTTTAATTTATGGACTAGTCTCATTACTCCGGAATTATGCTCTTGTACCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp AGAACCCCCATTTGGACTGATGGACGGCTTCTGAGATGGTCACTGGACACGTCGCTTCCCTGTCTTGGTTaGACTGTAGATGTTCTCAAT +
Preference number: 4 (lower is better)
Translates to: RTPIWTDGRLLRWSLDTSLPCLG*TVDVLN
Trigger: ATTGAGAACATCTACAGTGCAACCAAGACAGGGAAG...CGACGTGTCCAGTGACCATCTCAGAAGCCGTCCATCAGTCCAAATGGGGGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp AGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTGGCAGAAAGGCATGTTGTaGTTTTTCGCTCCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: RLRASPFPQSQILRSQCWQKGML*FFAPCS
Trigger: GGAGCAAGGAGCGAAAAAGCACAACATGCCTTTCTG...CCAACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp ACTGATGGACGGCTTCTGAGATGGTCACTGGACACGTCGTCTCGGCTGTGGGGCAAATCAGCAATTCCTTaGTTTTGTTCTGTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: TDGRLLRWSLDTSSRLWGKSAIP*FCSVSL
Trigger: AAGACTCACAGAACAAAAGCAAGGAATTGCTGATTT...GCCCCACAGCCGAGACGACGTGTCCAGTGACCATCTCAGAAGCCGTCCATCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp CAAAGAATGATTGTCCCCACAAAGCACAACTTGGAGAATAGAGTGCTTACATTATTCTCGGTGGGGAGGTaGGGAAGGCGAGGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: QRMIVPTKHNLENRVLTLFSVGR*GRRGGL
Trigger: CAGACCCCCTCGCCTTCCCCACCTCCCCACCGAGAA...TAATGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGGGACAATCATTCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp CCAGCCACACAGGTACAAGAGCATAATTCCGGAGTAATGAGACTAGTCCATAAATGTGGGGCCCCTTCCTaGTGTCCAACATCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: PATQVQEHNSGVMRLVHKCGAPS*CPTSGS
Trigger: AGACCCAGATGTTGGACACCAGGAAGGGGCCCCACA...TTTATGGACTAGTCTCATTACTCCGGAATTATGCTCTTGTACCTGTGTGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp ATACTCCGAAGCCAATGTTGGGTACTTTCCTTCTCAGAACCCCCATTTGGACTGCTCAGAACCCCCATTTaGACTGATGGACGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: ILRSQCWVLSFSEPPFGLLRTPI*TDGRLL
Trigger: CAGAAGCCGTCCATCAGTCCAAATGGGGGTTCTGAG...CAGTCCAAATGGGGGTTCTGAGAAGGAAAGTACCCAACATTGGCTTCGGAGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR TCA 90 bp CTAGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTAGCTGTCTTCTGTCTTaGTGCTGTAGGAAGGGATTC +
Preference number: 4 (lower is better)
Translates to: LDSEPALFPKVKYSEANVSCLLS*CCRKGF
Trigger: GAATCCCTTCCTACAGCATCAAGACAGAAGACAGCT...AACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000611592.4
CDS-3UTR TCA 90 bp GTTCAAAGAATGATTGTCCCCACAAAGCACAACTTGGAGAATAGAGTGCTTACATGGTTGGGGACGTTGTaGGATGCCTCCTGGAGGACG +
Preference number: 4 (lower is better)
Translates to: VQRMIVPTKHNLENRVLTWLGTL*DASWRT
Trigger: CGTCCTCCAGGAGGCATCTCACAACGTCCCCAACCA...TGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGGGACAATCATTCTTTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR TCA 90 bp GCCTTCCTCTCTAATGTTCAAAGAATGATTGTCCCCACAAAGCACAACTTGGAGCTGATGGACGGCTTCTaGGATGGTCACTGGACACGT +
Preference number: 4 (lower is better)
Translates to: AFLSNVQRMIVPTKHNLELMDGF*DGHWTR
Trigger: ACGTGTCCAGTGACCATCTCAGAAGCCGTCCATCAG...CTCCAAGTTGTGCTTTGTGGGGACAATCATTCTTTGAACATTAGAGAGGAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp AGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTGGTTTCTGCCGAATCTCTaGATTATCCTCTCGAAGCAG +
Preference number: 4 (lower is better)
Translates to: RLRASPFPQSQILRSQCWFLPNL*IILSKQ
Trigger: CTGCTTCGAGAGGATAATGCAGAGATTCGGCAGAAA...CCAACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp TTCCTTCTCAGAACCCCCATTTGGACTGATGGACGGCTTCTGAGATGGTCACTGTTTCTGCCGAATCTCTaGATTATCCTCTCGAAGCAG +
Preference number: 4 (lower is better)
Translates to: FLLRTPIWTDGRLLRWSLFLPNL*IILSKQ
Trigger: CTGCTTCGAGAGGATAATGCAGAGATTCGGCAGAAA...CAGTGACCATCTCAGAAGCCGTCCATCAGTCCAAATGGGGGTTCTGAGAAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp AGAATGATTGTCCCCACAAAGCACAACTTGGAGAATAGAGTGCTTACATTAGAATCCAGCTCCAGGGCGTaGCTCAGTGCCTCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: RMIVPTKHNLENRVLTLESSSRA*LSASRS
Trigger: AGACCTGGAGGCACTGAGGCACGCCCTGGAGCTGGA...TTCTAATGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGGGACAATCATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp CCAGCCACACAGGTACAAGAGCATAATTCCGGAGTAATGAGACTAGTCCATAAACACGTGGGCAAGATCTaGAGAAGAGCTGGGACACTC +
Preference number: 4 (lower is better)
Translates to: PATQVQEHNSGVMRLVHKHVGKI*RRAGTL
Trigger: GAGTGTCCCAGCTCTTCTCCAGATCTTGCCCACGTG...TTTATGGACTAGTCTCATTACTCCGGAATTATGCTCTTGTACCTGTGTGGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp AGAATGATTGTCCCCACAAAGCACAACTTGGAGAATAGAGTGCTTACATTAGAAAAGGGCAGATGCTGCTaGCCGGGACGTAGGGAGGGT +
Preference number: 4 (lower is better)
Translates to: RMIVPTKHNLENRVLTLEKGRCC*PGRREG
Trigger: ACCCTCCCTACGTCCCGGCCAGCAGCATCTGCCCTT...TTCTAATGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGGGACAATCATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp ATACTCCGAAGCCAATGTTGGGTACTTTCCTTCTCAGAACCCCCATTTGGACTGCCTCTTTCGCTGGTGTaGAAGGTCCATTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: ILRSQCWVLSFSEPPFGLPLSLV*KVHCVC
Trigger: ACACACACAATGGACCTTCCACACCAGCGAAAGAGG...CAGTCCAAATGGGGGTTCTGAGAAGGAAAGTACCCAACATTGGCTTCGGAGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp ATACTCCGAAGCCAATGTTGGGTACTTTCCTTCTCAGAACCCCCATTTGGACTGGAGACGTCATCAACGTaGATCTGGTCACAATCCTCC +
Preference number: 4 (lower is better)
Translates to: ILRSQCWVLSFSEPPFGLETSST*IWSQSS
Trigger: GGAGGATTGTGACCAGATCCACGTTGATGACGTCTC...CAGTCCAAATGGGGGTTCTGAGAAGGAAAGTACCCAACATTGGCTTCGGAGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
CDS-3UTR CCA 90 bp CAAAGAATGATTGTCCCCACAAAGCACAACTTGGAGAATAGAGTGCTTACATTAAGCCCAGGCACAGGTTaGCTCCTGGGGCCGAACTGT +
Preference number: 4 (lower is better)
Translates to: QRMIVPTKHNLENRVLTLSPGTG*LLGPNC
Trigger: ACAGTTCGGCCCCAGGAGCCAACCTGTGCCTGGGCT...TAATGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGGGACAATCATTCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp ACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTGGGTCATATAGCAGGACTTTaGCCAGGGCAGGAATTAGTT +
Preference number: 4 (lower is better)
Translates to: TPSQPFSPKSNTPKPMLGHIAGL*PGQELV
Trigger: AACTAATTCCTGCCCTGGCCAAAGTCCTGCTATATG...ACCCAACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp GGCACGTGCACTGTCCACATGACGTCAAGTAGGTCTTTAAAAACAAAAATAAGCGCCTCCAGGTCTGCGTaGCAGGATATCCGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: GTCTVHMTSSRSLKTKISASRSA*QDIRQK
Trigger: TTTCTGGCGGATATCCTGCCACGCAGACCTGGAGGC...GCTTATTTTTGTTTTTAAAGACCTACTTGACGTCATGTGGACAGTGCACGTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp GCCTTCCTCTCTAATGTTCAAAGAATGATTGTCCCCACAAAGCACAACTTGGAGGGACGGCTTCTGAGATaGTCACTGGACACGTCGTCT +
Preference number: 4 (lower is better)
Translates to: AFLSNVQRMIVPTKHNLEGRLLR*SLDTSS
Trigger: AGACGACGTGTCCAGTGACCATCTCAGAAGCCGTCC...CTCCAAGTTGTGCTTTGTGGGGACAATCATTCTTTGAACATTAGAGAGGAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp TTCCTTCTCAGAACCCCCATTTGGACTGATGGACGGCTTCTGAGATGGTCACTGCTCCGAAGCCAATGTTaGGTACTTTCCTTCTCAGAA +
Preference number: 4 (lower is better)
Translates to: FLLRTPIWTDGRLLRWSLLRSQC*VLSFSE
Trigger: TTCTGAGAAGGAAAGTACCCAACATTGGCTTCGGAG...CAGTGACCATCTCAGAAGCCGTCCATCAGTCCAAATGGGGGTTCTGAGAAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp TTCCTTCTCAGAACCCCCATTTGGACTGATGGACGGCTTCTGAGATGGTCACTGTCATCAACGTGGATCTaGTCACAATCCTTCCCGTAT +
Preference number: 4 (lower is better)
Translates to: FLLRTPIWTDGRLLRWSLSSTWI*SQSFPY
Trigger: ATACGGGAAGGATTGTGACCAGATCCACGTTGATGA...CAGTGACCATCTCAGAAGCCGTCCATCAGTCCAAATGGGGGTTCTGAGAAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611592.4
CDS-3UTR TCA 90 bp ATACTCCGAAGCCAATGTTGGGTACTTTCCTTCTCAGAACCCCCATTTGGACTGAATCGCTGTTTACAGTaGGGCTGGGTGAGATCACTA +
Preference number: 4 (lower is better)
Translates to: ILRSQCWVLSFSEPPFGLNRCLQ*GWVRSL
Trigger: TAGTGATCTCACCCAGCCTCACTGTAAACAGCGATT...CAGTCCAAATGGGGGTTCTGAGAAGGAAAGTACCCAACATTGGCTTCGGAGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR TCA 90 bp AGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTGGGTGTATCTGCAAGGTTaGAGATCATCTCTTCCATCA +
Preference number: 4 (lower is better)
Translates to: RLRASPFPQSQILRSQCWVYLQG*RSSLPS
Trigger: TGATGGAAGAGATGATCTTCAACCTTGCAGATACAC...CCAACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
CDS-3UTR TCA 90 bp GGCACGTGCACTGTCCACATGACGTCAAGTAGGTCTTTAAAAACAAAAATAAGCCTGATGGACGGCTTCTaGGATGGTCACTGGACACGT +
Preference number: 4 (lower is better)
Translates to: GTCTVHMTSSRSLKTKISLMDGF*DGHWTR
Trigger: ACGTGTCCAGTGACCATCTCAGAAGCCGTCCATCAG...GCTTATTTTTGTTTTTAAAGACCTACTTGACGTCATGTGGACAGTGCACGTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR TCA 90 bp CCAGCCACACAGGTACAAGAGCATAATTCCGGAGTAATGAGACTAGTCCATAAAAACCCCCATTTGGACTaGTGGACGGCTTCTGAGATG +
Preference number: 4 (lower is better)
Translates to: PATQVQEHNSGVMRLVHKNPHLD*WTASEM
Trigger: CATCTCAGAAGCCGTCCATCAGTCCAAATGGGGGTT...TTTATGGACTAGTCTCATTACTCCGGAATTATGCTCTTGTACCTGTGTGGCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR TCA 90 bp TGTTCTGTGAGTCTTACAGAAGAGTCTAGACTCCGAGCCAGCCCTTTTCCCCAACTTACATTAGAACTGTaGACCACCCCACATACCAGT +
Preference number: 4 (lower is better)
Translates to: CSVSLTEESRLRASPFPQLTLEL*TTPHTS
Trigger: ACTGGTATGTGGGGTGGTTCACAGTTCTAATGTAAG...TTGGGGAAAAGGGCTGGCTCGGAGTCTAGACTCTTCTGTAAGACTCACAGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR TCA 90 bp ACAGAAGAGTCTAGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGACTTACATTAGAACTGTaGACCACCCCACATACCAGT +
Preference number: 4 (lower is better)
Translates to: TEESRLRASPFPQSQILRLTLEL*TTPHTS
Trigger: ACTGGTATGTGGGGTGGTTCACAGTTCTAATGTAAG...TCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCTAGACTCTTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp TGTTCTGTGAGTCTTACAGAAGAGTCTAGACTCCGAGCCAGCCCTTTTCCCCAATTTCTGCCGAATCTCTaGATTATCCTCTCGAAGCAG +
Preference number: 4 (lower is better)
Translates to: CSVSLTEESRLRASPFPQFLPNL*IILSKQ
Trigger: CTGCTTCGAGAGGATAATGCAGAGATTCGGCAGAAA...TTGGGGAAAAGGGCTGGCTCGGAGTCTAGACTCTTCTGTAAGACTCACAGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp ATACTCCGAAGCCAATGTTGGGTACTTTCCTTCTCAGAACCCCCATTTGGACTGTGCTTTTTCGCTCCTTaGTCCTCTTCCACACCATCA +
Preference number: 4 (lower is better)
Translates to: ILRSQCWVLSFSEPPFGLCFFAP*SSSTPS
Trigger: TGATGGTGTGGAAGAGGAGCAAGGAGCGAAAAAGCA...CAGTCCAAATGGGGGTTCTGAGAAGGAAAGTACCCAACATTGGCTTCGGAGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp ATACTCCGAAGCCAATGTTGGGTACTTTCCTTCTCAGAACCCCCATTTGGACTGCAGAAAGGCATGTTGTaGTTTTTCGCTCCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: ILRSQCWVLSFSEPPFGLQKGML*FFAPCS
Trigger: GGAGCAAGGAGCGAAAAAGCACAACATGCCTTTCTG...CAGTCCAAATGGGGGTTCTGAGAAGGAAAGTACCCAACATTGGCTTCGGAGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp AGAATGATTGTCCCCACAAAGCACAACTTGGAGAATAGAGTGCTTACATTAGAAGCGGGGGAGGACACGTaGGCAAGATCTGGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: RMIVPTKHNLENRVLTLEAGEDT*ARSGEE
Trigger: CTCTTCTCCAGATCTTGCCCACGTGTCCTCCCCCGC...TTCTAATGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGGGACAATCATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp GCCTTCCTCTCTAATGTTCAAAGAATGATTGTCCCCACAAAGCACAACTTGGAGGTCTCCCTCTTTCGCTaGTGTGGAAGGTCCATTGTG +
Preference number: 4 (lower is better)
Translates to: AFLSNVQRMIVPTKHNLEVSLFR*CGRSIV
Trigger: CACAATGGACCTTCCACACCAGCGAAAGAGGGAGAC...CTCCAAGTTGTGCTTTGTGGGGACAATCATTCTTTGAACATTAGAGAGGAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp GTTCAAAGAATGATTGTCCCCACAAAGCACAACTTGGAGAATAGAGTGCTTACAAGTGCCTTCAGGGAGTaGGTCAGCCAGAGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: VQRMIVPTKHNLENRVLTSAFRE*VSQRSV
Trigger: CACAGACCTCTGGCTGACCCACTCCCTGAAGGCACT...TGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGGGACAATCATTCTTTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp CTAGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTCATATAGCAGGACTTTaGCCAGGGCAGGAATTAGTT +
Preference number: 4 (lower is better)
Translates to: LDSEPALFPKVKYSEANVHIAGL*PGQELV
Trigger: AACTAATTCCTGCCCTGGCCAAAGTCCTGCTATATG...AACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp ACACAGGTACAAGAGCATAATTCCGGAGTAATGAGACTAGTCCATAAATTAAAATTCTCGGTGGGGAGGTaGGGAAGGCGAGGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: TQVQEHNSGVMRLVHKLKFSVGR*GRRGGL
Trigger: CAGACCCCCTCGCCTTCCCCACCTCCCCACCGAGAA...TTTTAATTTATGGACTAGTCTCATTACTCCGGAATTATGCTCTTGTACCTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR TCA 90 bp ACAGAAGAGTCTAGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAGTGTATCTGCAAGGTTaGAGATCATCTCTTCCATCA +
Preference number: 4 (lower is better)
Translates to: TEESRLRASPFPQSQILRVYLQG*RSSLPS
Trigger: TGATGGAAGAGATGATCTTCAACCTTGCAGATACAC...TCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCTAGACTCTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
CDS-3UTR TCA 90 bp CAAAGAATGATTGTCCCCACAAAGCACAACTTGGAGAATAGAGTGCTTACATTATCAGCCAGAGGTCTGTaGGAGCTTCCAGCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: QRMIVPTKHNLENRVLTLSARGL*ELPAQL
Trigger: GAGCTGAGCTGGAAGCTCTCACAGACCTCTGGCTGA...TAATGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGGGACAATCATTCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000497062.6
ENST00000611592.4
CDS-3UTR TCA 90 bp GGCACGTGCACTGTCCACATGACGTCAAGTAGGTCTTTAAAAACAAAAATAAGCAACCCCCATTTGGACTaGTGGACGGCTTCTGAGATG +
Preference number: 4 (lower is better)
Translates to: GTCTVHMTSSRSLKTKISNPHLD*WTASEM
Trigger: CATCTCAGAAGCCGTCCATCAGTCCAAATGGGGGTT...GCTTATTTTTGTTTTTAAAGACCTACTTGACGTCATGTGGACAGTGCACGTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp ACACAGGTACAAGAGCATAATTCCGGAGTAATGAGACTAGTCCATAAATTAAAAAAGGGCAGATGCTGCTaGCCGGGACGTAGGGAGGGT +
Preference number: 4 (lower is better)
Translates to: TQVQEHNSGVMRLVHKLKKGRCC*PGRREG
Trigger: ACCCTCCCTACGTCCCGGCCAGCAGCATCTGCCCTT...TTTTAATTTATGGACTAGTCTCATTACTCCGGAATTATGCTCTTGTACCTGTGT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp ACACAGGTACAAGAGCATAATTCCGGAGTAATGAGACTAGTCCATAAATTAAAAGGACGTAGGTGGACGTaGAGAGGGGCGAAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: TQVQEHNSGVMRLVHKLKGRRWT*RGAKGR
Trigger: TCTGCCCTTCGCCCCTCTCCACGTCCACCTACGTCC...TTTTAATTTATGGACTAGTCTCATTACTCCGGAATTATGCTCTTGTACCTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp CCAGCCACACAGGTACAAGAGCATAATTCCGGAGTAATGAGACTAGTCCATAAAGAGACGTCATCAACGTaGATCTGGTCACAATCCTCC +
Preference number: 4 (lower is better)
Translates to: PATQVQEHNSGVMRLVHKETSST*IWSQSS
Trigger: GGAGGATTGTGACCAGATCCACGTTGATGACGTCTC...TTTATGGACTAGTCTCATTACTCCGGAATTATGCTCTTGTACCTGTGTGGCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
CDS-3UTR CCA 90 bp ACACAGGTACAAGAGCATAATTCCGGAGTAATGAGACTAGTCCATAAATTAAAAGCACAGGTTGGCTCCTaGGGCCGAACTGTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: TQVQEHNSGVMRLVHKLKAQVGS*GRTVEA
Trigger: GGCTTCCACAGTTCGGCCCCAGGAGCCAACCTGTGC...TTTTAATTTATGGACTAGTCTCATTACTCCGGAATTATGCTCTTGTACCTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp AGAATGATTGTCCCCACAAAGCACAACTTGGAGAATAGAGTGCTTACATTAGAAAGTGCCTTCAGGGAGTaGGTCAGCCAGAGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: RMIVPTKHNLENRVLTLESAFRE*VSQRSV
Trigger: CACAGACCTCTGGCTGACCCACTCCCTGAAGGCACT...TTCTAATGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGGGACAATCATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000497062.6
ENST00000611592.4
CDS-3UTR TCA 90 bp CCAGCCACACAGGTACAAGAGCATAATTCCGGAGTAATGAGACTAGTCCATAAAAGCTGTCTTCTGTCTTaGTGCTGTAGGAAGGGATTC +
Preference number: 4 (lower is better)
Translates to: PATQVQEHNSGVMRLVHKSCLLS*CCRKGF
Trigger: GAATCCCTTCCTACAGCATCAAGACAGAAGACAGCT...TTTATGGACTAGTCTCATTACTCCGGAATTATGCTCTTGTACCTGTGTGGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000611592.4
CDS-3UTR TCA 90 bp CAAAGAATGATTGTCCCCACAAAGCACAACTTGGAGAATAGAGTGCTTACATTAGGGAGGGTTGTAGGATaGGCCGTAATACTGGGGGTA +
Preference number: 4 (lower is better)
Translates to: QRMIVPTKHNLENRVLTLGRVVG*AVILGV
Trigger: TACCCCCAGTATTACGGCTCATCCTACAACCCTCCC...TAATGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGGGACAATCATTCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR TCA 90 bp AGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTGGCCCGTGAGTAAGGAGTaGAAAATAATTATTGTCTCA +
Preference number: 4 (lower is better)
Translates to: RLRASPFPQSQILRSQCWPVSKE*KIIIVS
Trigger: TGAGACAATAATTATTTTTCACTCCTTACTCACGGG...CCAACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR TCA 90 bp TGTTCTGTGAGTCTTACAGAAGAGTCTAGACTCCGAGCCAGCCCTTTTCCCCAACTTGCTTTTGTTCTGTaGGTCTTACAGAAGAGTCTA +
Preference number: 4 (lower is better)
Translates to: CSVSLTEESRLRASPFPQLAFVL*VLQKSL
Trigger: TAGACTCTTCTGTAAGACTCACAGAACAAAAGCAAG...TTGGGGAAAAGGGCTGGCTCGGAGTCTAGACTCTTCTGTAAGACTCACAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp GGCACGTGCACTGTCCACATGACGTCAAGTAGGTCTTTAAAAACAAAAATAAGCTCTCCCTTTTGGGAGTaGCTATCAACCCACCAACGT +
Preference number: 4 (lower is better)
Translates to: GTCTVHMTSSRSLKTKISSPFWE*LSTHQR
Trigger: ACGTTGGTGGGTTGATAGGCACTCCCAAAAGGGAGA...GCTTATTTTTGTTTTTAAAGACCTACTTGACGTCATGTGGACAGTGCACGTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp CAAAGAATGATTGTCCCCACAAAGCACAACTTGGAGAATAGAGTGCTTACATTAGGCTTGTGCTGGAGGTaGGTAAGCTGTATAGGGGGT +
Preference number: 4 (lower is better)
Translates to: QRMIVPTKHNLENRVLTLGLCWR*VSCIGG
Trigger: ACCCCCTATACAGCTTACCCACCTCCAGCACAAGCC...TAATGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGGGACAATCATTCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp GTTCAAAGAATGATTGTCCCCACAAAGCACAACTTGGAGAATAGAGTGCTTACAACTCGGAACTCTGGTTaGGGACGTTGTGAGATGCCT +
Preference number: 4 (lower is better)
Translates to: VQRMIVPTKHNLENRVLTTRNSG*GRCEMP
Trigger: AGGCATCTCACAACGTCCCCAACCAGAGTTCCGAGT...TGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGGGACAATCATTCTTTGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp AGAATGATTGTCCCCACAAAGCACAACTTGGAGAATAGAGTGCTTACATTAGAACAACATCTGGGTCTCTaGAGTTCTCGGTGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: RMIVPTKHNLENRVLTLEQHLGL*SSRWGG
Trigger: ACCTCCCCACCGAGAACTCCAGAGACCCAGATGTTG...TTCTAATGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGGGACAATCATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp CAAAGAATGATTGTCCCCACAAAGCACAACTTGGAGAATAGAGTGCTTACATTACAACATCTGGGTCTCTaGAGTTCTCGGTGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: QRMIVPTKHNLENRVLTLQHLGL*SSRWGG
Trigger: ACCTCCCCACCGAGAACTCCAGAGACCCAGATGTTG...TAATGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGGGACAATCATTCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp GTTCAAAGAATGATTGTCCCCACAAAGCACAACTTGGAGAATAGAGTGCTTACACTGGTGTCCAACATCTaGGTCTCTGGAGTTCTCGGT +
Preference number: 4 (lower is better)
Translates to: VQRMIVPTKHNLENRVLTLVSNI*VSGVLG
Trigger: ACCGAGAACTCCAGAGACCCAGATGTTGGACACCAG...TGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGGGACAATCATTCTTTGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR TCA 90 bp GGCACGTGCACTGTCCACATGACGTCAAGTAGGTCTTTAAAAACAAAAATAAGCAGCTGTCTTCTGTCTTaGTGCTGTAGGAAGGGATTC +
Preference number: 4 (lower is better)
Translates to: GTCTVHMTSSRSLKTKISSCLLS*CCRKGF
Trigger: GAATCCCTTCCTACAGCATCAAGACAGAAGACAGCT...GCTTATTTTTGTTTTTAAAGACCTACTTGACGTCATGTGGACAGTGCACGTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000611592.4
CDS-3UTR CCA 90 bp CAAAGAATGATTGTCCCCACAAAGCACAACTTGGAGAATAGAGTGCTTACATTACTCTGGCCAGGGGAATaGTTCAAGCTGTCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: QRMIVPTKHNLENRVLTLLWPGE*FKLSSV
Trigger: GACAGAAGACAGCTTGAACCATTCCCCTGGCCAGAG...TAATGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGGGACAATCATTCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000611592.4
CDS-3UTR CCA 90 bp AGAATGATTGTCCCCACAAAGCACAACTTGGAGAATAGAGTGCTTACATTAGAAGTCTCCCTCTTTCGCTaGTGTGGAAGGTCCATTGTG +
Preference number: 4 (lower is better)
Translates to: RMIVPTKHNLENRVLTLEVSLFR*CGRSIV
Trigger: CACAATGGACCTTCCACACCAGCGAAAGAGGGAGAC...TTCTAATGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGGGACAATCATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp GGCACGTGCACTGTCCACATGACGTCAAGTAGGTCTTTAAAAACAAAAATAAGCTCATCAACGTGGATCTaGTCACAATCCTCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: GTCTVHMTSSRSLKTKISSSTWI*SQSSRS
Trigger: TGACCTGGAGGATTGTGACCAGATCCACGTTGATGA...GCTTATTTTTGTTTTTAAAGACCTACTTGACGTCATGTGGACAGTGCACGTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
CDS-3UTR CCA 90 bp ACAGAAGAGTCTAGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGATATGTGCTTAAATCTTaGCCATTGTCATCTGATGAG +
Preference number: 4 (lower is better)
Translates to: TEESRLRASPFPQSQILRYVLKS*PLSSDE
Trigger: CTCATCAGATGACAATGGCCAAGATTTAAGCACATA...TCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCTAGACTCTTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp CTAGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTTATGTGCTTAAATCTTaGCCATTGTCATCTGATGAG +
Preference number: 4 (lower is better)
Translates to: LDSEPALFPKVKYSEANVYVLKS*PLSSDE
Trigger: CTCATCAGATGACAATGGCCAAGATTTAAGCACATA...AACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp AGAATGATTGTCCCCACAAAGCACAACTTGGAGAATAGAGTGCTTACATTAGAACTGGTGTCCAACATCTaGGTCTCTGGAGTTCTCGGT +
Preference number: 4 (lower is better)
Translates to: RMIVPTKHNLENRVLTLELVSNI*VSGVLG
Trigger: ACCGAGAACTCCAGAGACCCAGATGTTGGACACCAG...TTCTAATGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGGGACAATCATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR TCA 90 bp GCCTTCCTCTCTAATGTTCAAAGAATGATTGTCCCCACAAAGCACAACTTGGAGGTCTTTTCAACAGCTTaGACTGCCTTCCTCTCTAAT +
Preference number: 4 (lower is better)
Translates to: AFLSNVQRMIVPTKHNLEVFSTA*TAFLSN
Trigger: ATTAGAGAGGAAGGCAGTTCAAGCTGTTGAAAAGAC...CTCCAAGTTGTGCTTTGTGGGGACAATCATTCTTTGAACATTAGAGAGGAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR TCA 90 bp CCAGCCACACAGGTACAAGAGCATAATTCCGGAGTAATGAGACTAGTCCATAAAGTCTTTTCAACAGCTTaGACTGCCTTCCTCTCTAAT +
Preference number: 4 (lower is better)
Translates to: PATQVQEHNSGVMRLVHKVFSTA*TAFLSN
Trigger: ATTAGAGAGGAAGGCAGTTCAAGCTGTTGAAAAGAC...TTTATGGACTAGTCTCATTACTCCGGAATTATGCTCTTGTACCTGTGTGGCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp CAAAGAATGATTGTCCCCACAAAGCACAACTTGGAGAATAGAGTGCTTACATTAGATTCCATAGGCTTGTaGTGGAGGTGGGTAAGCTGT +
Preference number: 4 (lower is better)
Translates to: QRMIVPTKHNLENRVLTLDSIGL*WRWVSC
Trigger: ACAGCTTACCCACCTCCAGCACAAGCCTATGGAATC...TAATGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGGGACAATCATTCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp GTTCAAAGAATGATTGTCCCCACAAAGCACAACTTGGAGAATAGAGTGCTTACATGCTTTTTCGCTCCTTaGTCCTCTTCCACACCATCA +
Preference number: 4 (lower is better)
Translates to: VQRMIVPTKHNLENRVLTCFFAP*SSSTPS
Trigger: TGATGGTGTGGAAGAGGAGCAAGGAGCGAAAAAGCA...TGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGGGACAATCATTCTTTGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp CAAAGAATGATTGTCCCCACAAAGCACAACTTGGAGAATAGAGTGCTTACATTACCTCTTTCGCTGGTGTaGAAGGTCCATTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: QRMIVPTKHNLENRVLTLPLSLV*KVHCVC
Trigger: ACACACACAATGGACCTTCCACACCAGCGAAAGAGG...TAATGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGGGACAATCATTCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp AGAATGATTGTCCCCACAAAGCACAACTTGGAGAATAGAGTGCTTACATTAGAACCTCTTTCGCTGGTGTaGAAGGTCCATTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: RMIVPTKHNLENRVLTLEPLSLV*KVHCVC
Trigger: ACACACACAATGGACCTTCCACACCAGCGAAAGAGG...TTCTAATGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGGGACAATCATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp ACACAGGTACAAGAGCATAATTCCGGAGTAATGAGACTAGTCCATAAATTAAAAGGACGGCTTCTGAGATaGTCACTGGACACGTCGTCT +
Preference number: 4 (lower is better)
Translates to: TQVQEHNSGVMRLVHKLKGRLLR*SLDTSS
Trigger: AGACGACGTGTCCAGTGACCATCTCAGAAGCCGTCC...TTTTAATTTATGGACTAGTCTCATTACTCCGGAATTATGCTCTTGTACCTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR TCA 90 bp ACACAGGTACAAGAGCATAATTCCGGAGTAATGAGACTAGTCCATAAATTAAAAGTATTCACCAGCAAGTaGCTCGGAACTCTGGTTGGG +
Preference number: 4 (lower is better)
Translates to: TQVQEHNSGVMRLVHKLKVFTSK*LGTLVG
Trigger: CCCAACCAGAGTTCCGAGTCACTTGCTGGTGAATAC...TTTTAATTTATGGACTAGTCTCATTACTCCGGAATTATGCTCTTGTACCTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR TCA 90 bp CAAAGAATGATTGTCCCCACAAAGCACAACTTGGAGAATAGAGTGCTTACATTAAGGTGGAGATGCTGCTaGTCCTGCTATAAATACTCC +
Preference number: 4 (lower is better)
Translates to: QRMIVPTKHNLENRVLTLRWRCC*SCYKYS
Trigger: GGAGTATTTATAGCAGGATCAGCAGCATCTCCACCT...TAATGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGGGACAATCATTCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR TCA 90 bp GCCTTCCTCTCTAATGTTCAAAGAATGATTGTCCCCACAAAGCACAACTTGGAGCTTGCTTTTGTTCTGTaGGTCTTACAGAAGAGTCTA +
Preference number: 4 (lower is better)
Translates to: AFLSNVQRMIVPTKHNLELAFVL*VLQKSL
Trigger: TAGACTCTTCTGTAAGACTCACAGAACAAAAGCAAG...CTCCAAGTTGTGCTTTGTGGGGACAATCATTCTTTGAACATTAGAGAGGAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp GTTCAAAGAATGATTGTCCCCACAAAGCACAACTTGGAGAATAGAGTGCTTACATTTCTGCCGAATCTCTaGATTATCCTCTCGAAGCAG +
Preference number: 4 (lower is better)
Translates to: VQRMIVPTKHNLENRVLTFLPNL*IILSKQ
Trigger: CTGCTTCGAGAGGATAATGCAGAGATTCGGCAGAAA...TGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGGGACAATCATTCTTTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp AGAATGATTGTCCCCACAAAGCACAACTTGGAGAATAGAGTGCTTACATTAGAACAGAAAGGCATGTTGTaGTTTTTCGCTCCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: RMIVPTKHNLENRVLTLEQKGML*FFAPCS
Trigger: GGAGCAAGGAGCGAAAAAGCACAACATGCCTTTCTG...TTCTAATGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGGGACAATCATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp ACACAGGTACAAGAGCATAATTCCGGAGTAATGAGACTAGTCCATAAATTAAAAACTCGGAACTCTGGTTaGGGACGTTGTGAGATGCCT +
Preference number: 4 (lower is better)
Translates to: TQVQEHNSGVMRLVHKLKTRNSG*GRCEMP
Trigger: AGGCATCTCACAACGTCCCCAACCAGAGTTCCGAGT...TTTTAATTTATGGACTAGTCTCATTACTCCGGAATTATGCTCTTGTACCTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp ACACAGGTACAAGAGCATAATTCCGGAGTAATGAGACTAGTCCATAAATTAAAACTCAGAACCCCCATTTaGACTGATGGACGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: TQVQEHNSGVMRLVHKLKLRTPI*TDGRLL
Trigger: CAGAAGCCGTCCATCAGTCCAAATGGGGGTTCTGAG...TTTTAATTTATGGACTAGTCTCATTACTCCGGAATTATGCTCTTGTACCTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR TCA 90 bp CCAGCCACACAGGTACAAGAGCATAATTCCGGAGTAATGAGACTAGTCCATAAACCCGTGAGTAAGGAGTaGAAAATAATTATTGTCTCA +
Preference number: 4 (lower is better)
Translates to: PATQVQEHNSGVMRLVHKPVSKE*KIIIVS
Trigger: TGAGACAATAATTATTTTTCACTCCTTACTCACGGG...TTTATGGACTAGTCTCATTACTCCGGAATTATGCTCTTGTACCTGTGTGGCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR TCA 90 bp AGAATGATTGTCCCCACAAAGCACAACTTGGAGAATAGAGTGCTTACATTAGAACTTACATTAGAACTGTaGACCACCCCACATACCAGT +
Preference number: 4 (lower is better)
Translates to: RMIVPTKHNLENRVLTLELTLEL*TTPHTS
Trigger: ACTGGTATGTGGGGTGGTTCACAGTTCTAATGTAAG...TTCTAATGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGGGACAATCATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp AGAATGATTGTCCCCACAAAGCACAACTTGGAGAATAGAGTGCTTACATTAGAACGTAGACAGCTTTTCTaGCGAATCTCTGCATTATCC +
Preference number: 4 (lower is better)
Translates to: RMIVPTKHNLENRVLTLERRQLF*RISALS
Trigger: GGATAATGCAGAGATTCGGCAGAAAAGCTGTCTACG...TTCTAATGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGGGACAATCATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp CCAGCCACACAGGTACAAGAGCATAATTCCGGAGTAATGAGACTAGTCCATAAATATGTGCTTAAATCTTaGCCATTGTCATCTGATGAG +
Preference number: 4 (lower is better)
Translates to: PATQVQEHNSGVMRLVHKYVLKS*PLSSDE
Trigger: CTCATCAGATGACAATGGCCAAGATTTAAGCACATA...TTTATGGACTAGTCTCATTACTCCGGAATTATGCTCTTGTACCTGTGTGGCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp AGAATGATTGTCCCCACAAAGCACAACTTGGAGAATAGAGTGCTTACATTAGAACTCCGAAGCCAATGTTaGGTACTTTCCTTCTCAGAA +
Preference number: 4 (lower is better)
Translates to: RMIVPTKHNLENRVLTLELRSQC*VLSFSE
Trigger: TTCTGAGAAGGAAAGTACCCAACATTGGCTTCGGAG...TTCTAATGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGGGACAATCATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR TCA 90 bp GGCACGTGCACTGTCCACATGACGTCAAGTAGGTCTTTAAAAACAAAAATAAGCCCCGTGAGTAAGGAGTaGAAAATAATTATTGTCTCA +
Preference number: 4 (lower is better)
Translates to: GTCTVHMTSSRSLKTKISPVSKE*KIIIVS
Trigger: TGAGACAATAATTATTTTTCACTCCTTACTCACGGG...GCTTATTTTTGTTTTTAAAGACCTACTTGACGTCATGTGGACAGTGCACGTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR TCA 90 bp ACACAGGTACAAGAGCATAATTCCGGAGTAATGAGACTAGTCCATAAATTAAAAAGGTGGAGATGCTGCTaGTCCTGCTATAAATACTCC +
Preference number: 4 (lower is better)
Translates to: TQVQEHNSGVMRLVHKLKRWRCC*SCYKYS
Trigger: GGAGTATTTATAGCAGGATCAGCAGCATCTCCACCT...TTTTAATTTATGGACTAGTCTCATTACTCCGGAATTATGCTCTTGTACCTGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR TCA 90 bp AGAATGATTGTCCCCACAAAGCACAACTTGGAGAATAGAGTGCTTACATTAGAAGTCTTTTCAACAGCTTaGACTGCCTTCCTCTCTAAT +
Preference number: 4 (lower is better)
Translates to: RMIVPTKHNLENRVLTLEVFSTA*TAFLSN
Trigger: ATTAGAGAGGAAGGCAGTTCAAGCTGTTGAAAAGAC...TTCTAATGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGGGACAATCATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp CAAAGAATGATTGTCCCCACAAAGCACAACTTGGAGAATAGAGTGCTTACATTACTTCCCTGTCTTGGTTaGACTGTAGATGTTCTCAAT +
Preference number: 4 (lower is better)
Translates to: QRMIVPTKHNLENRVLTLLPCLG*TVDVLN
Trigger: ATTGAGAACATCTACAGTGCAACCAAGACAGGGAAG...TAATGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGGGACAATCATTCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp CCAGCCACACAGGTACAAGAGCATAATTCCGGAGTAATGAGACTAGTCCATAAAAAATCAGCAATTCCTTaGTTTTGTTCTGTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: PATQVQEHNSGVMRLVHKKSAIP*FCSVSL
Trigger: AAGACTCACAGAACAAAAGCAAGGAATTGCTGATTT...TTTATGGACTAGTCTCATTACTCCGGAATTATGCTCTTGTACCTGTGTGGCTGG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp ACACAGGTACAAGAGCATAATTCCGGAGTAATGAGACTAGTCCATAAATTAAAATCCATAGGCTTGTGCTaGAGGTGGGTAAGCTGTATA +
Preference number: 4 (lower is better)
Translates to: TQVQEHNSGVMRLVHKLKSIGLC*RWVSCI
Trigger: TATACAGCTTACCCACCTCCAGCACAAGCCTATGGA...TTTTAATTTATGGACTAGTCTCATTACTCCGGAATTATGCTCTTGTACCTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR TCA 90 bp GTTCAAAGAATGATTGTCCCCACAAAGCACAACTTGGAGAATAGAGTGCTTACACCCGTGAGTAAGGAGTaGAAAATAATTATTGTCTCA +
Preference number: 4 (lower is better)
Translates to: VQRMIVPTKHNLENRVLTPVSKE*KIIIVS
Trigger: TGAGACAATAATTATTTTTCACTCCTTACTCACGGG...TGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGGGACAATCATTCTTTGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR TCA 90 bp ACACAGGTACAAGAGCATAATTCCGGAGTAATGAGACTAGTCCATAAATTAAAACTTACATTAGAACTGTaGACCACCCCACATACCAGT +
Preference number: 4 (lower is better)
Translates to: TQVQEHNSGVMRLVHKLKLTLEL*TTPHTS
Trigger: ACTGGTATGTGGGGTGGTTCACAGTTCTAATGTAAG...TTTTAATTTATGGACTAGTCTCATTACTCCGGAATTATGCTCTTGTACCTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR TCA 90 bp CAAAGAATGATTGTCCCCACAAAGCACAACTTGGAGAATAGAGTGCTTACATTACTAATGTTCAAAGAATaGTTGTCCCCACAAAGCACA +
Preference number: 4 (lower is better)
Translates to: QRMIVPTKHNLENRVLTLLMFKE*LSPQST
Trigger: TGTGCTTTGTGGGGACAATCATTCTTTGAACATTAG...TAATGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGGGACAATCATTCTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CCA 90 bp AGAATGATTGTCCCCACAAAGCACAACTTGGAGAATAGAGTGCTTACATTAGAATATGTGCTTAAATCTTaGCCATTGTCATCTGATGAG +
Preference number: 4 (lower is better)
Translates to: RMIVPTKHNLENRVLTLEYVLKS*PLSSDE
Trigger: CTCATCAGATGACAATGGCCAAGATTTAAGCACATA...TTCTAATGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGGGACAATCATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR GCA 90 bp ACACAGGTACAAGAGCATAATTCCGGAGTAATGAGACTAGTCCATAAATTAAAAAAATCAGCAATTCCTTaGTTTTGTTCTGTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: TQVQEHNSGVMRLVHKLKKSAIP*FCSVSL
Trigger: AAGACTCACAGAACAAAAGCAAGGAATTGCTGATTT...TTTTAATTTATGGACTAGTCTCATTACTCCGGAATTATGCTCTTGTACCTGTGT
34% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS GCA 90 bp CTGCTCCTCTTAGACCGGCCTCGGAGCTTCCCGTCGGAGGCCCGGTaGGGCCTGTCTGTGTCTCCCTCTTTCGCTGGTGTGGAAGGTCCA +
Preference number: 5 (lower is better)
Translates to: LLLLDRPRSFPSEAR*GLSVSPSFAGVEGP
Trigger: TGGACCTTCCACACCAGCGAAAGAGGGAGACACAGACAGGCCGCACCGGGCCTCCGACGGGAAGCTCCGAGGCCGGTCTAAGAGGAGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000317304.10
ENST00000327619.10
ENST00000357410.7
ENST00000458636.2
ENST00000475856.1
ENST00000497062.6
ENST00000611592.4
CDS CCA 90 bp GTCCACGCCGCCGTGCACGCCAGAGCCCAGGCACAGGTTGGCTCCTaGGGCCGAACTGTGGAAGCCGTCAGCGGAGAAGTTGTATGTGCT +
Preference number: 5 (lower is better)
Translates to: VHAAVHARAQAQVGS*GRTVEAVSGEVVCA
Trigger: AGCACATACAACTTCTCCGCTGACGGCTTCCACAGTTCGGCCCCAGGAGCCAACCTGTGCCTGGGCTCTGGCGTGCACGGCGGCGTGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317304.10
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS GCA 90 bp CCTCCTGGAGGACGTAGGTGGACGTGGAGAGGGGCGAAGGGCAGATaGTGCTGGCCGGGACGTAGGGAGGGTTGTAGGATGAGCCGTAAT +
Preference number: 5 (lower is better)
Translates to: PPGGRRWTWRGAKGR*CWPGRREGCRMSRN
Trigger: ATTACGGCTCATCCTACAACCCTCCCTACGTCCCGGCCAGCAGCATCTGCCCTTCGCCCCTCTCCACGTCCACCTACGTCCTCCAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317304.10
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS CCA 90 bp GGAGGACGTAGGTGGACGTGGAGAGGGGCGAAGGGCAGATGCTGCTaGCCGGGACGTAGGGAGGGTTGTAGGATGAGCCGTAATACTGGG +
Preference number: 5 (lower is better)
Translates to: GGRRWTWRGAKGRCC*PGRREGCRMSRNTG
Trigger: CCCAGTATTACGGCTCATCCTACAACCCTCCCTACGTCCCGGCCAGCAGCATCTGCCCTTCGCCCCTCTCCACGTCCACCTACGTCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317304.10
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp CTGAGATGGTCACTGGACACGTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCCCGAAACCGGCTGCGTaGCCCAGTCCATTTCCTCCT +
Preference number: 5 (lower is better)
Translates to: LRWSLDTSSRLWGPFLVSPKPAA*PSPFPP
Trigger: AGGAGGAAATGGACTGGGCAACGCAGCCGGTTTCGG...GGACACCAGGAAGGGGCCCCACAGCCGAGACGACGTGTCCAGTGACCATCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS TCA 90 bp CCCTGCAGAGGCCTCAGTTCCGGCAGGATTTCCCCAGGCTCTCCCTaGGTAAGCGATTTCCCTCCTGCAGCTTTCACAGGCCCATGGCCC +
Preference number: 5 (lower is better)
Translates to: PCRGLSSGRISPGSP*VSDFPPAAFTGPWP
Trigger: GGGCCATGGGCCTGTGAAAGCTGCAGGAGGGAAATCGCTTACTCAGGGAGAGCCTGGGGAAATCCTGCCGGAACTGAGGCCTCTGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497428.1
CDS GCA 90 bp CCTGGAGGACGTAGGTGGACGTGGAGAGGGGCGAAGGGCAGATGCTaGTGGCCGGGACGTAGGGAGGGTTGTAGGATGAGCCGTAATACT +
Preference number: 5 (lower is better)
Translates to: PGGRRWTWRGAKGRC*WPGRREGCRMSRNT
Trigger: AGTATTACGGCTCATCCTACAACCCTCCCTACGTCCCGGCCAGCAGCATCTGCCCTTCGCCCCTCTCCACGTCCACCTACGTCCTCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317304.10
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp ACTGGACACGTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCAACATCTGGGTCCGAAACCGGCTGCGTaGCCCAGTCCATTTCCTCCT +
Preference number: 5 (lower is better)
Translates to: TGHVVSAVGPLPGVQHLGPKPAA*PSPFPP
Trigger: AGGAGGAAATGGACTGGGCAACGCAGCCGGTTTCGG...ACCCAGATGTTGGACACCAGGAAGGGGCCCCACAGCCGAGACGACGTGTCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp AGAACCCCCATTTGGACTGATGGACGGCTTCTGAGATGGTCACTGGACACGTCGACTGCGGCGGGCACGTaGCTGTCTCTGCCGTTGCCG +
Preference number: 5 (lower is better)
Translates to: RTPIWTDGRLLRWSLDTSTAAGT*LSLPLP
Trigger: CGGCAACGGCAGAGACAGCAACGTGCCCGCCGCAGT...CGACGTGTCCAGTGACCATCTCAGAAGCCGTCCATCAGTCCAAATGGGGGTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp CTGAGATGGTCACTGGACACGTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCCAGTTGGGCCGGGAGTaGATGAGGTTTAGTGCCTTC +
Preference number: 5 (lower is better)
Translates to: LRWSLDTSSRLWGPFLVSQLGRE*MRFSAF
Trigger: GAAGGCACTAAACCTCATCAACTCCCGGCCCAACTG...GGACACCAGGAAGGGGCCCCACAGCCGAGACGACGTGTCCAGTGACCATCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000497062.6
ENST00000611592.4
CDS CCA 90 bp CCCGTCGGAGGCCCGGTGCGGCCTGTCTGTGTCTCCCTCTTTCGCTaGTGTGGAAGGTCCATTGTGTGTGTTGTATTCACCGTGCATCTG +
Preference number: 5 (lower is better)
Translates to: PVGGPVRPVCVSLFR*CGRSIVCVVFTVHL
Trigger: CAGATGCACGGTGAATACAACACACACAATGGACCTTCCACACCAGCGAAAGAGGGAGACACAGACAGGCCGCACCGGGCCTCCGACGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458636.2
CDS-3UTR CAA 90 bp GATGGTCACTGGACACGTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCAACAAGCACATTGACACAGTaGGGCCGGGAGTTGATGAGG +
Preference number: 5 (lower is better)
Translates to: DGHWTRRLGCGAPSWCPTSTLTQ*GRELMR
Trigger: CCTCATCAACTCCCGGCCCAACTGTGTCAATGTGCT...TGTTGGACACCAGGAAGGGGCCCCACAGCCGAGACGACGTGTCCAGTGACCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000497062.6
ENST00000611592.4
CDS CCA 90 bp CGGAGGCCCGGTGCGGCCTGTCTGTGTCTCCCTCTTTCGCTGGTGTaGAAGGTCCATTGTGTGTGTTGTATTCACCAGCAAGTGACTCGG +
Preference number: 5 (lower is better)
Translates to: RRPGAACLCLPLSLV*KVHCVCCIHQQVTR
Trigger: CCGAGTCACTTGCTGGTGAATACAACACACACAATGGACCTTCCACACCAGCGAAAGAGGGAGACACAGACAGGCCGCACCGGGCCTCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317304.10
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS CCA 90 bp ACACAGTTGGGCCGGGAGTTGATGAGGTTTAGTGCCTTCAGGGAGTaGGTCAGCCAGAGGTCTGTGAGAGCTTCCAGCTCAGCTCGGAGC +
Preference number: 5 (lower is better)
Translates to: TQLGRELMRFSAFRE*VSQRSVRASSSARS
Trigger: GCTCCGAGCTGAGCTGGAAGCTCTCACAGACCTCTGGCTGACCCACTCCCTGAAGGCACTAAACCTCATCAACTCCCGGCCCAACTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317304.10
ENST00000327619.10
ENST00000497062.6
ENST00000611592.4
CDS CCA 90 bp CGGAGGCCCGGTGCGGCCTGTCTGTGTCTCCCTCTTTCGCTGGTGTaGAAGGTCCATTGTGTGTGTTGTATTCACCGTGCATCTGGTAGG +
Preference number: 5 (lower is better)
Translates to: RRPGAACLCLPLSLV*KVHCVCCIHRASGR
Trigger: CCTACCAGATGCACGGTGAATACAACACACACAATGGACCTTCCACACCAGCGAAAGAGGGAGACACAGACAGGCCGCACCGGGCCTCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458636.2
CDS-3UTR CAA 90 bp TTCCTTCTCAGAACCCCCATTTGGACTGATGGACGGCTTCTGAGATGGTCACTGACTGCGGCGGGCACGTaGCTGTCTCTGCCGTTGCCG +
Preference number: 5 (lower is better)
Translates to: FLLRTPIWTDGRLLRWSLTAAGT*LSLPLP
Trigger: CGGCAACGGCAGAGACAGCAACGTGCCCGCCGCAGT...CAGTGACCATCTCAGAAGCCGTCCATCAGTCCAAATGGGGGTTCTGAGAAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp CTGAGATGGTCACTGGACACGTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCCGATTTGGTGATGCCTaGTCTGTCACTCAGAGTCCA +
Preference number: 5 (lower is better)
Translates to: LRWSLDTSSRLWGPFLVSRFGDA*SVTQSP
Trigger: TGGACTCTGAGTGACAGACAAGGCATCACCAAATCG...GGACACCAGGAAGGGGCCCCACAGCCGAGACGACGTGTCCAGTGACCATCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp GTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCAACATCTGGGTCTCTGGAGTCTTGATAGAACCCTGTaGTGCCGTGCATCTGGTAGG +
Preference number: 5 (lower is better)
Translates to: VVSAVGPLPGVQHLGLWSLDRTL*CRASGR
Trigger: CCTACCAGATGCACGGCACAACAGGGTTCTATCAAG...ACTCCAGAGACCCAGATGTTGGACACCAGGAAGGGGCCCCACAGCCGAGACGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp GATGGTCACTGGACACGTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCAACACTTGATAGAACCCTGTaGTGCCGTGCATCTGGTAGG +
Preference number: 5 (lower is better)
Translates to: DGHWTRRLGCGAPSWCPTLDRTL*CRASGR
Trigger: CCTACCAGATGCACGGCACAACAGGGTTCTATCAAG...TGTTGGACACCAGGAAGGGGCCCCACAGCCGAGACGACGTGTCCAGTGACCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp ACTGATGGACGGCTTCTGAGATGGTCACTGGACACGTCGTCTCGGCTGTGGGGCCAGTTGGGCCGGGAGTaGATGAGGTTTAGTGCCTTC +
Preference number: 5 (lower is better)
Translates to: TDGRLLRWSLDTSSRLWGQLGRE*MRFSAF
Trigger: GAAGGCACTAAACCTCATCAACTCCCGGCCCAACTG...GCCCCACAGCCGAGACGACGTGTCCAGTGACCATCTCAGAAGCCGTCCATCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp GATGGTCACTGGACACGTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCAACACGCCAGAAAGGCATGTaGTGCTTTTTCGCTCCTTGC +
Preference number: 5 (lower is better)
Translates to: DGHWTRRLGCGAPSWCPTRQKGM*CFFAPC
Trigger: GCAAGGAGCGAAAAAGCACAACATGCCTTTCTGGCG...TGTTGGACACCAGGAAGGGGCCCCACAGCCGAGACGACGTGTCCAGTGACCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS GCA 90 bp CGGCAGGATTTCCCCAGGCTCTCCCTGAGTAAGCGATTTCCCTCCTaGAGCTTTCACAGGCCCATGGCCCTCTATCACACACACCAGTCA +
Preference number: 5 (lower is better)
Translates to: RQDFPRLSLSKRFPS*SFHRPMALYHTHQS
Trigger: TGACTGGTGTGTGTGATAGAGGGCCATGGGCCTGTGAAAGCTGCAGGAGGGAAATCGCTTACTCAGGGAGAGCCTGGGGAAATCCTGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497428.1
CDS-3UTR CAA 90 bp AGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTGGTTGCTGTCTCTGCCGTaGCCGCTGCCTCCGCCTCCT +
Preference number: 5 (lower is better)
Translates to: RLRASPFPQSQILRSQCWLLSLP*PLPPPP
Trigger: AGGAGGCGGAGGCAGCGGCAACGGCAGAGACAGCAA...CCAACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000611592.4
CDS-3UTR CAA 90 bp ACTGATGGACGGCTTCTGAGATGGTCACTGGACACGTCGTCTCGGCTGTGGGGCAGTTCTACCATTTCCTaGTACCGCGCGCAGTGGAGA +
Preference number: 5 (lower is better)
Translates to: TDGRLLRWSLDTSSRLWGSSTIS*YRAQWR
Trigger: TCTCCACTGCGCGCGGTACAAGGAAATGGTAGAACT...GCCCCACAGCCGAGACGACGTGTCCAGTGACCATCTCAGAAGCCGTCCATCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp GATGGTCACTGGACACGTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCAACACGATTTGGTGATGCCTaGTCTGTCACTCAGAGTCCA +
Preference number: 5 (lower is better)
Translates to: DGHWTRRLGCGAPSWCPTRFGDA*SVTQSP
Trigger: TGGACTCTGAGTGACAGACAAGGCATCACCAAATCG...TGTTGGACACCAGGAAGGGGCCCCACAGCCGAGACGACGTGTCCAGTGACCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp CTGAGATGGTCACTGGACACGTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCGGTCCATTGTGTGTGTaGTATTCACCAGCAAGTGAC +
Preference number: 5 (lower is better)
Translates to: LRWSLDTSSRLWGPFLVSGPLCV*YSPASD
Trigger: GTCACTTGCTGGTGAATACAACACACACAATGGACC...GGACACCAGGAAGGGGCCCCACAGCCGAGACGACGTGTCCAGTGACCATCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp CTGAGATGGTCACTGGACACGTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCCCGTCAGCGGAGAAGTaGTATGTGCTTAAATCTTGG +
Preference number: 5 (lower is better)
Translates to: LRWSLDTSSRLWGPFLVSPSAEK*YVLKSW
Trigger: CCAAGATTTAAGCACATACAACTTCTCCGCTGACGG...GGACACCAGGAAGGGGCCCCACAGCCGAGACGACGTGTCCAGTGACCATCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp ACTGATGGACGGCTTCTGAGATGGTCACTGGACACGTCGTCTCGGCTGTGGGGCCGCCAGAAAGGCATGTaGTGCTTTTTCGCTCCTTGC +
Preference number: 5 (lower is better)
Translates to: TDGRLLRWSLDTSSRLWGRQKGM*CFFAPC
Trigger: GCAAGGAGCGAAAAAGCACAACATGCCTTTCTGGCG...GCCCCACAGCCGAGACGACGTGTCCAGTGACCATCTCAGAAGCCGTCCATCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS GCA 90 bp GGTAGGAAGGATAGTCCTGGTGCACACTCCCGAAACCGGCTGCGTTaGCCAGTCCATTTCCTCCTTGATAGAACCCTGTTGTGCCGTGCA +
Preference number: 5 (lower is better)
Translates to: GRKDSPGAHSRNRLR*PVHFLLDRTLLCRA
Trigger: TGCACGGCACAACAGGGTTCTATCAAGGAGGAAATGGACTGGGCAACGCAGCCGGTTTCGGGAGTGTGCACCAGGACTATCCTTCCTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317304.10
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS GCA 90 bp GCCTCCAGGTCTGCGTGGCAGGATATCCGCCAGAAAGGCATGTTGTaGTTTTTCGCTCCTTGCTCCTCTTCCACACCATCACCGATCACC +
Preference number: 5 (lower is better)
Translates to: ASRSAWQDIRQKGML*FFAPCSSSTPSPIT
Trigger: GGTGATCGGTGATGGTGTGGAAGAGGAGCAAGGAGCGAAAAAGCACAACATGCCTTTCTGGCGGATATCCTGCCACGCAGACCTGGAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317304.10
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp ACAGAAGAGTCTAGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGATTGCTGTCTCTGCCGTaGCCGCTGCCTCCGCCTCCT +
Preference number: 5 (lower is better)
Translates to: TEESRLRASPFPQSQILRLLSLP*PLPPPP
Trigger: AGGAGGCGGAGGCAGCGGCAACGGCAGAGACAGCAA...TCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCTAGACTCTTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000611592.4
CDS-3UTR CAA 90 bp ACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTGGGTACACGCTCAATCTCATaGTCCCCTGCCGGGGACGGG +
Preference number: 5 (lower is better)
Translates to: TPSQPFSPKSNTPKPMLGTRSIS*SPAGDG
Trigger: CCCGTCCCCGGCAGGGGACAATGAGATTGAGCGTGT...ACCCAACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp GATGGTCACTGGACACGTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCAACACCTTCCCTGTCTTGGTaGCACTGTAGATGTTCTCAA +
Preference number: 5 (lower is better)
Translates to: DGHWTRRLGCGAPSWCPTPSLSW*HCRCSQ
Trigger: TTGAGAACATCTACAGTGCAACCAAGACAGGGAAGG...TGTTGGACACCAGGAAGGGGCCCCACAGCCGAGACGACGTGTCCAGTGACCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp GATGGTCACTGGACACGTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCAACAACTCCGAAGCCAATGTaGGGTACTTTCCTTCTCAGA +
Preference number: 5 (lower is better)
Translates to: DGHWTRRLGCGAPSWCPTTPKPM*GTFLLR
Trigger: TCTGAGAAGGAAAGTACCCAACATTGGCTTCGGAGT...TGTTGGACACCAGGAAGGGGCCCCACAGCCGAGACGACGTGTCCAGTGACCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS CCA 90 bp GCCTTGATCTGGCTTCTCCTTGTCCAATATCTGATTCCAGCACGCTaGCCTTTCTCTCGCTCCACACTCCCTCTTGCCACAGGGCCTTTG +
Preference number: 5 (lower is better)
Translates to: ALIWLLLVQYLIPAR*PFSRSTLPLATGPL
Trigger: CAAAGGCCCTGTGGCAAGAGGGAGTGTGGAGCGAGAGAAAGGCCAGCGTGCTGGAATCAGATATTGGACAAGGAGAAGCCAGATCAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497428.1
CDS-3UTR CAA 90 bp ACAGAAGAGTCTAGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAACACGCTCAATCTCATaGTCCCCTGCCGGGGACGGG +
Preference number: 5 (lower is better)
Translates to: TEESRLRASPFPQSQILRTRSIS*SPAGDG
Trigger: CCCGTCCCCGGCAGGGGACAATGAGATTGAGCGTGT...TCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCTAGACTCTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp CTAGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTACACGCTCAATCTCATaGTCCCCTGCCGGGGACGGG +
Preference number: 5 (lower is better)
Translates to: LDSEPALFPKVKYSEANVTRSIS*SPAGDG
Trigger: CCCGTCCCCGGCAGGGGACAATGAGATTGAGCGTGT...AACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp CTGAGATGGTCACTGGACACGTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCCTTAAATCTTGGCCATaGTCATCTGATGAGACGTCA +
Preference number: 5 (lower is better)
Translates to: LRWSLDTSSRLWGPFLVSLKSWP*SSDETS
Trigger: TGACGTCTCATCAGATGACAATGGCCAAGATTTAAG...GGACACCAGGAAGGGGCCCCACAGCCGAGACGACGTGTCCAGTGACCATCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS CCA 90 bp CATTGTGTGTGTTGTATTCACCAGCAAGTGACTCGGAACTCTGGTTaGGGACGTTGTGAGATGCCTCCTGGAGGACGTAGGTGGACGTGG +
Preference number: 5 (lower is better)
Translates to: HCVCCIHQQVTRNSG*GRCEMPPGGRRWTW
Trigger: CCACGTCCACCTACGTCCTCCAGGAGGCATCTCACAACGTCCCCAACCAGAGTTCCGAGTCACTTGCTGGTGAATACAACACACACAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317304.10
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp TGTTCTGTGAGTCTTACAGAAGAGTCTAGACTCCGAGCCAGCCCTTTTCCCCAACCGAAACCGGCTGCGTaGCCCAGTCCATTTCCTCCT +
Preference number: 5 (lower is better)
Translates to: CSVSLTEESRLRASPFPQPKPAA*PSPFPP
Trigger: AGGAGGAAATGGACTGGGCAACGCAGCCGGTTTCGG...TTGGGGAAAAGGGCTGGCTCGGAGTCTAGACTCTTCTGTAAGACTCACAGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp CGGCTGTGGGGCCCCTTCCTGGTGTCCAACATCTGGGTCTCTGGAGTTCTCGGTCAATCCTCCAGGTCATaGAAGAACAGATGTGTATCT +
Preference number: 5 (lower is better)
Translates to: RLWGPFLVSNIWVSGVLGQSSRS*KNRCVS
Trigger: AGATACACATCTGTTCTTCAATGACCTGGAGGATTG...ACCGAGAACTCCAGAGACCCAGATGTTGGACACCAGGAAGGGGCCCCACAGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
CDS-3UTR CAA 90 bp ACTGGACACGTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCAACATCTGGGTCTTAAATCTTGGCCATaGTCATCTGATGAGACGTCA +
Preference number: 5 (lower is better)
Translates to: TGHVVSAVGPLPGVQHLGLKSWP*SSDETS
Trigger: TGACGTCTCATCAGATGACAATGGCCAAGATTTAAG...ACCCAGATGTTGGACACCAGGAAGGGGCCCCACAGCCGAGACGACGTGTCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp TGTTCTGTGAGTCTTACAGAAGAGTCTAGACTCCGAGCCAGCCCTTTTCCCCAAGTGGTGACCAGCACATaGACACAGTTGGGCCGGGAG +
Preference number: 5 (lower is better)
Translates to: CSVSLTEESRLRASPFPQVVTST*TQLGRE
Trigger: CTCCCGGCCCAACTGTGTCAATGTGCTGGTCACCAC...TTGGGGAAAAGGGCTGGCTCGGAGTCTAGACTCTTCTGTAAGACTCACAGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp AGAACCCCCATTTGGACTGATGGACGGCTTCTGAGATGGTCACTGGACACGTCGCGCCAGAAAGGCATGTaGTGCTTTTTCGCTCCTTGC +
Preference number: 5 (lower is better)
Translates to: RTPIWTDGRLLRWSLDTSRQKGM*CFFAPC
Trigger: GCAAGGAGCGAAAAAGCACAACATGCCTTTCTGGCG...CGACGTGTCCAGTGACCATCTCAGAAGCCGTCCATCAGTCCAAATGGGGGTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp CTGAGATGGTCACTGGACACGTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCCAAATCAGCAATTCCTaGCTTTTGTTCTGTGAGTCT +
Preference number: 5 (lower is better)
Translates to: LRWSLDTSSRLWGPFLVSQISNS*LLFCES
Trigger: AGACTCACAGAACAAAAGCAAGGAATTGCTGATTTG...GGACACCAGGAAGGGGCCCCACAGCCGAGACGACGTGTCCAGTGACCATCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp ACTGATGGACGGCTTCTGAGATGGTCACTGGACACGTCGTCTCGGCTGTGGGGCCCCACAAAGCACAACTaGGAGAATAGAGTGCTTACA +
Preference number: 5 (lower is better)
Translates to: TDGRLLRWSLDTSSRLWGPTKHN*ENRVLT
Trigger: TGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGG...GCCCCACAGCCGAGACGACGTGTCCAGTGACCATCTCAGAAGCCGTCCATCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS GCA 90 bp GCTCCTCTTCCACACCATCACCGATCACCACGTAGACAGCTTTTCTaGCGAATCTCTGCATTATCCTCTCGAAGCAGCTCTCCTTCCCTG +
Preference number: 5 (lower is better)
Translates to: APLPHHHRSPRRQLF*RISALSSRSSSPSL
Trigger: CAGGGAAGGAGAGCTGCTTCGAGAGGATAATGCAGAGATTCGGCAGAAAAGCTGTCTACGTGGTGATCGGTGATGGTGTGGAAGAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317304.10
ENST00000327619.10
ENST00000497062.6
ENST00000611592.4
CDS GCA 90 bp GCTCCTCTTCCACACCATCACCGATCACCACGTAGACAGCTTTTCTaGCGAATCTCTGCATTATCCTCTCGAAGCAGCTCTCCTTCCCAC +
Preference number: 5 (lower is better)
Translates to: APLPHHHRSPRRQLF*RISALSSRSSSPSH
Trigger: GTGGGAAGGAGAGCTGCTTCGAGAGGATAATGCAGAGATTCGGCAGAAAAGCTGTCTACGTGGTGATCGGTGATGGTGTGGAAGAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357410.7
CDS-3UTR CAA 90 bp ACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTGGGTAGGGATTCCATAGGCTaGTGCTGGAGGTGGGTAAGC +
Preference number: 5 (lower is better)
Translates to: TPSQPFSPKSNTPKPMLGRDSIG*CWRWVS
Trigger: GCTTACCCACCTCCAGCACAAGCCTATGGAATCCCT...ACCCAACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp ACTGATGGACGGCTTCTGAGATGGTCACTGGACACGTCGTCTCGGCTGTGGGGCCTTAAATCTTGGCCATaGTCATCTGATGAGACGTCA +
Preference number: 5 (lower is better)
Translates to: TDGRLLRWSLDTSSRLWGLKSWP*SSDETS
Trigger: TGACGTCTCATCAGATGACAATGGCCAAGATTTAAG...GCCCCACAGCCGAGACGACGTGTCCAGTGACCATCTCAGAAGCCGTCCATCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp AGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTGGAGCACATTGACACAGTaGGGCCGGGAGTTGATGAGG +
Preference number: 5 (lower is better)
Translates to: RLRASPFPQSQILRSQCWSTLTQ*GRELMR
Trigger: CCTCATCAACTCCCGGCCCAACTGTGTCAATGTGCT...CCAACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp ACTGGACACGTCGTCTCGGCTGTGGGGCCCCTTCCTGGTGTCCAACATCTGGGTAGCAATTCCTTGCTTTaGTTCTGTGAGTCTTACAGA +
Preference number: 5 (lower is better)
Translates to: TGHVVSAVGPLPGVQHLGSNSLL*FCESYR
Trigger: TCTGTAAGACTCACAGAACAAAAGCAAGGAATTGCT...ACCCAGATGTTGGACACCAGGAAGGGGCCCCACAGCCGAGACGACGTGTCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp AGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTGGAGTTCTACCATTTCCTaGTACCGCGCGCAGTGGAGA +
Preference number: 5 (lower is better)
Translates to: RLRASPFPQSQILRSQCWSSTIS*YRAQWR
Trigger: TCTCCACTGCGCGCGGTACAAGGAAATGGTAGAACT...CCAACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp CTAGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTAGGGATTCCATAGGCTaGTGCTGGAGGTGGGTAAGC +
Preference number: 5 (lower is better)
Translates to: LDSEPALFPKVKYSEANVRDSIG*CWRWVS
Trigger: GCTTACCCACCTCCAGCACAAGCCTATGGAATCCCT...AACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp TTCCTTCTCAGAACCCCCATTTGGACTGATGGACGGCTTCTGAGATGGTCACTGCTTGATAGAACCCTGTaGTGCCGTGCATCTGGTAGG +
Preference number: 5 (lower is better)
Translates to: FLLRTPIWTDGRLLRWSLLDRTL*CRASGR
Trigger: CCTACCAGATGCACGGCACAACAGGGTTCTATCAAG...CAGTGACCATCTCAGAAGCCGTCCATCAGTCCAAATGGGGGTTCTGAGAAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp AGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTGGCTTGATAGAACCCTGTaGTGCCGTGCATCTGGTAGG +
Preference number: 5 (lower is better)
Translates to: RLRASPFPQSQILRSQCWLDRTL*CRASGR
Trigger: CCTACCAGATGCACGGCACAACAGGGTTCTATCAAG...CCAACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp ACAGAAGAGTCTAGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGACAGTTGGGCCGGGAGTaGATGAGGTTTAGTGCCTTC +
Preference number: 5 (lower is better)
Translates to: TEESRLRASPFPQSQILRQLGRE*MRFSAF
Trigger: GAAGGCACTAAACCTCATCAACTCCCGGCCCAACTG...TCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCTAGACTCTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp CTAGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTAGCACATTGACACAGTaGGGCCGGGAGTTGATGAGG +
Preference number: 5 (lower is better)
Translates to: LDSEPALFPKVKYSEANVSTLTQ*GRELMR
Trigger: CCTCATCAACTCCCGGCCCAACTGTGTCAATGTGCT...AACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp GTTCAAAGAATGATTGTCCCCACAAAGCACAACTTGGAGAATAGAGTGCTTACATTGCTGTCTCTGCCGTaGCCGCTGCCTCCGCCTCCT +
Preference number: 5 (lower is better)
Translates to: VQRMIVPTKHNLENRVLTLLSLP*PLPPPP
Trigger: AGGAGGCGGAGGCAGCGGCAACGGCAGAGACAGCAA...TGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGGGACAATCATTCTTTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000611592.4
CDS-3UTR CAA 90 bp CTAGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTAGTTCTACCATTTCCTaGTACCGCGCGCAGTGGAGA +
Preference number: 5 (lower is better)
Translates to: LDSEPALFPKVKYSEANVSSTIS*YRAQWR
Trigger: TCTCCACTGCGCGCGGTACAAGGAAATGGTAGAACT...AACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp GCCTTCCTCTCTAATGTTCAAAGAATGATTGTCCCCACAAAGCACAACTTGGAGGTGGTGACCAGCACATaGACACAGTTGGGCCGGGAG +
Preference number: 5 (lower is better)
Translates to: AFLSNVQRMIVPTKHNLEVVTST*TQLGRE
Trigger: CTCCCGGCCCAACTGTGTCAATGTGCTGGTCACCAC...CTCCAAGTTGTGCTTTGTGGGGACAATCATTCTTTGAACATTAGAGAGGAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp AGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTGGCCATATAGCAGGACTTaGGCCAGGGCAGGAATTAGT +
Preference number: 5 (lower is better)
Translates to: RLRASPFPQSQILRSQCWPYSRT*ARAGIS
Trigger: ACTAATTCCTGCCCTGGCCAAAGTCCTGCTATATGG...CCAACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp ACAGAAGAGTCTAGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGACGATTTGGTGATGCCTaGTCTGTCACTCAGAGTCCA +
Preference number: 5 (lower is better)
Translates to: TEESRLRASPFPQSQILRRFGDA*SVTQSP
Trigger: TGGACTCTGAGTGACAGACAAGGCATCACCAAATCG...TCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCTAGACTCTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp GGCACGTGCACTGTCCACATGACGTCAAGTAGGTCTTTAAAAACAAAAATAAGCCCGAAACCGGCTGCGTaGCCCAGTCCATTTCCTCCT +
Preference number: 5 (lower is better)
Translates to: GTCTVHMTSSRSLKTKISPKPAA*PSPFPP
Trigger: AGGAGGAAATGGACTGGGCAACGCAGCCGGTTTCGG...GCTTATTTTTGTTTTTAAAGACCTACTTGACGTCATGTGGACAGTGCACGTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp TTCCTTCTCAGAACCCCCATTTGGACTGATGGACGGCTTCTGAGATGGTCACTGGGTGTGGAAGGTCCATaGTGTGTGTTGTATTCACCA +
Preference number: 5 (lower is better)
Translates to: FLLRTPIWTDGRLLRWSLGVEGP*CVLYSP
Trigger: TGGTGAATACAACACACACAATGGACCTTCCACACC...CAGTGACCATCTCAGAAGCCGTCCATCAGTCCAAATGGGGGTTCTGAGAAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp AGAACCCCCATTTGGACTGATGGACGGCTTCTGAGATGGTCACTGGACACGTCGTGTGTATCTGCAAGGTaGAAGATCATCTCTTCCATC +
Preference number: 5 (lower is better)
Translates to: RTPIWTDGRLLRWSLDTSCVSAR*KIISSI
Trigger: GATGGAAGAGATGATCTTCAACCTTGCAGATACACA...CGACGTGTCCAGTGACCATCTCAGAAGCCGTCCATCAGTCCAAATGGGGGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
CDS-3UTR CAA 90 bp AGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTGGCCGTCAGCGGAGAAGTaGTATGTGCTTAAATCTTGG +
Preference number: 5 (lower is better)
Translates to: RLRASPFPQSQILRSQCWPSAEK*YVLKSW
Trigger: CCAAGATTTAAGCACATACAACTTCTCCGCTGACGG...CCAACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp GGCACGTGCACTGTCCACATGACGTCAAGTAGGTCTTTAAAAACAAAAATAAGCGTGGTGACCAGCACATaGACACAGTTGGGCCGGGAG +
Preference number: 5 (lower is better)
Translates to: GTCTVHMTSSRSLKTKISVVTST*TQLGRE
Trigger: CTCCCGGCCCAACTGTGTCAATGTGCTGGTCACCAC...GCTTATTTTTGTTTTTAAAGACCTACTTGACGTCATGTGGACAGTGCACGTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp TTCCTTCTCAGAACCCCCATTTGGACTGATGGACGGCTTCTGAGATGGTCACTGCCTTCCCTGTCTTGGTaGCACTGTAGATGTTCTCAA +
Preference number: 5 (lower is better)
Translates to: FLLRTPIWTDGRLLRWSLPSLSW*HCRCSQ
Trigger: TTGAGAACATCTACAGTGCAACCAAGACAGGGAAGG...CAGTGACCATCTCAGAAGCCGTCCATCAGTCCAAATGGGGGTTCTGAGAAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp ATACTCCGAAGCCAATGTTGGGTACTTTCCTTCTCAGAACCCCCATTTGGACTGCGCCAGAAAGGCATGTaGTGCTTTTTCGCTCCTTGC +
Preference number: 5 (lower is better)
Translates to: ILRSQCWVLSFSEPPFGLRQKGM*CFFAPC
Trigger: GCAAGGAGCGAAAAAGCACAACATGCCTTTCTGGCG...CAGTCCAAATGGGGGTTCTGAGAAGGAAAGTACCCAACATTGGCTTCGGAGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp ACAGAAGAGTCTAGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAGGTGTGGAAGGTCCATaGTGTGTGTTGTATTCACCA +
Preference number: 5 (lower is better)
Translates to: TEESRLRASPFPQSQILRGVEGP*CVLYSP
Trigger: TGGTGAATACAACACACACAATGGACCTTCCACACC...TCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCTAGACTCTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp TGTTCTGTGAGTCTTACAGAAGAGTCTAGACTCCGAGCCAGCCCTTTTCCCCAAACTCCGAAGCCAATGTaGGGTACTTTCCTTCTCAGA +
Preference number: 5 (lower is better)
Translates to: CSVSLTEESRLRASPFPQTPKPM*GTFLLR
Trigger: TCTGAGAAGGAAAGTACCCAACATTGGCTTCGGAGT...TTGGGGAAAAGGGCTGGCTCGGAGTCTAGACTCTTCTGTAAGACTCACAGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp ACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTGGGTCCCACAAAGCACAACTaGGAGAATAGAGTGCTTACA +
Preference number: 5 (lower is better)
Translates to: TPSQPFSPKSNTPKPMLGPTKHN*ENRVLT
Trigger: TGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGG...ACCCAACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp AGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTGGCCCACAAAGCACAACTaGGAGAATAGAGTGCTTACA +
Preference number: 5 (lower is better)
Translates to: RLRASPFPQSQILRSQCWPTKHN*ENRVLT
Trigger: TGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGG...CCAACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp CCAGCCACACAGGTACAAGAGCATAATTCCGGAGTAATGAGACTAGTCCATAAAAGTTCTACCATTTCCTaGTACCGCGCGCAGTGGAGA +
Preference number: 5 (lower is better)
Translates to: PATQVQEHNSGVMRLVHKSSTIS*YRAQWR
Trigger: TCTCCACTGCGCGCGGTACAAGGAAATGGTAGAACT...TTTATGGACTAGTCTCATTACTCCGGAATTATGCTCTTGTACCTGTGTGGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp ATACTCCGAAGCCAATGTTGGGTACTTTCCTTCTCAGAACCCCCATTTGGACTGGGTGTGGAAGGTCCATaGTGTGTGTTGTATTCACCA +
Preference number: 5 (lower is better)
Translates to: ILRSQCWVLSFSEPPFGLGVEGP*CVLYSP
Trigger: TGGTGAATACAACACACACAATGGACCTTCCACACC...CAGTCCAAATGGGGGTTCTGAGAAGGAAAGTACCCAACATTGGCTTCGGAGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp AGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGAAGCCAATGTTGGTGTGTATCTGCAAGGTaGAAGATCATCTCTTCCATC +
Preference number: 5 (lower is better)
Translates to: RLRASPFPQSQILRSQCWCVSAR*KIISSI
Trigger: GATGGAAGAGATGATCTTCAACCTTGCAGATACACA...CCAACATTGGCTTCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
CDS-3UTR CAA 90 bp ATACTCCGAAGCCAATGTTGGGTACTTTCCTTCTCAGAACCCCCATTTGGACTGACTCCGAAGCCAATGTaGGGTACTTTCCTTCTCAGA +
Preference number: 5 (lower is better)
Translates to: ILRSQCWVLSFSEPPFGLTPKPM*GTFLLR
Trigger: TCTGAGAAGGAAAGTACCCAACATTGGCTTCGGAGT...CAGTCCAAATGGGGGTTCTGAGAAGGAAAGTACCCAACATTGGCTTCGGAGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp CCAGCCACACAGGTACAAGAGCATAATTCCGGAGTAATGAGACTAGTCCATAAACGATTTGGTGATGCCTaGTCTGTCACTCAGAGTCCA +
Preference number: 5 (lower is better)
Translates to: PATQVQEHNSGVMRLVHKRFGDA*SVTQSP
Trigger: TGGACTCTGAGTGACAGACAAGGCATCACCAAATCG...TTTATGGACTAGTCTCATTACTCCGGAATTATGCTCTTGTACCTGTGTGGCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp GTTCAAAGAATGATTGTCCCCACAAAGCACAACTTGGAGAATAGAGTGCTTACAAGGGATTCCATAGGCTaGTGCTGGAGGTGGGTAAGC +
Preference number: 5 (lower is better)
Translates to: VQRMIVPTKHNLENRVLTRDSIG*CWRWVS
Trigger: GCTTACCCACCTCCAGCACAAGCCTATGGAATCCCT...TGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGGGACAATCATTCTTTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp ACACAGGTACAAGAGCATAATTCCGGAGTAATGAGACTAGTCCATAAATTAAAAACACGCTCAATCTCATaGTCCCCTGCCGGGGACGGG +
Preference number: 5 (lower is better)
Translates to: TQVQEHNSGVMRLVHKLKTRSIS*SPAGDG
Trigger: CCCGTCCCCGGCAGGGGACAATGAGATTGAGCGTGT...TTTTAATTTATGGACTAGTCTCATTACTCCGGAATTATGCTCTTGTACCTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp TTCCTTCTCAGAACCCCCATTTGGACTGATGGACGGCTTCTGAGATGGTCACTGAGCAATTCCTTGCTTTaGTTCTGTGAGTCTTACAGA +
Preference number: 5 (lower is better)
Translates to: FLLRTPIWTDGRLLRWSLSNSLL*FCESYR
Trigger: TCTGTAAGACTCACAGAACAAAAGCAAGGAATTGCT...CAGTGACCATCTCAGAAGCCGTCCATCAGTCCAAATGGGGGTTCTGAGAAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS CCA 90 bp GTTCTACCATTTCCTTGTACCATTCGTTTCATTCCAGGTAGACACTaGAAACTGTCATCAGGATCACCCGGAAACCACTGGTTCCTATTG +
Preference number: 5 (lower is better)
Translates to: VLPFPCTIRFIPGRH*KLSSGSPGNHWFLL
Trigger: CAATAGGAACCAGTGGTTTCCGGGTGATCCTGATGACAGTTTCCAGTGTCTACCTGGAATGAAACGAATGGTACAAGGAAATGGTAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471081.1
CDS CCA 90 bp ATTGCTCTTAAGATAAAGCAAAGAGTTCCGAACACAGCCTTGATCTaGCTTCTCCTTGTCCAATATCTGATTCCAGCACGCTGGCCTTTC +
Preference number: 5 (lower is better)
Translates to: IALKIKQRVPNTALI*LLLVQYLIPARWPF
Trigger: GAAAGGCCAGCGTGCTGGAATCAGATATTGGACAAGGAGAAGCCAGATCAAGGCTGTGTTCGGAACTCTTTGCTTTATCTTAAGAGCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497428.1
CDS-3UTR CAA 90 bp AGAATGATTGTCCCCACAAAGCACAACTTGGAGAATAGAGTGCTTACATTAGAAAGGGATTCCATAGGCTaGTGCTGGAGGTGGGTAAGC +
Preference number: 5 (lower is better)
Translates to: RMIVPTKHNLENRVLTLERDSIG*CWRWVS
Trigger: GCTTACCCACCTCCAGCACAAGCCTATGGAATCCCT...TTCTAATGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGGGACAATCATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp GCCTTCCTCTCTAATGTTCAAAGAATGATTGTCCCCACAAAGCACAACTTGGAGGGTCCATTGTGTGTGTaGTATTCACCAGCAAGTGAC +
Preference number: 5 (lower is better)
Translates to: AFLSNVQRMIVPTKHNLEGPLCV*YSPASD
Trigger: GTCACTTGCTGGTGAATACAACACACACAATGGACC...CTCCAAGTTGTGCTTTGTGGGGACAATCATTCTTTGAACATTAGAGAGGAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp CCAGCCACACAGGTACAAGAGCATAATTCCGGAGTAATGAGACTAGTCCATAAACCGTCAGCGGAGAAGTaGTATGTGCTTAAATCTTGG +
Preference number: 5 (lower is better)
Translates to: PATQVQEHNSGVMRLVHKPSAEK*YVLKSW
Trigger: CCAAGATTTAAGCACATACAACTTCTCCGCTGACGG...TTTATGGACTAGTCTCATTACTCCGGAATTATGCTCTTGTACCTGTGTGGCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp ACAGAAGAGTCTAGACTCCGAGCCAGCCCTTTTCCCCAAAGTCAAATACTCCGACAAATCAGCAATTCCTaGCTTTTGTTCTGTGAGTCT +
Preference number: 5 (lower is better)
Translates to: TEESRLRASPFPQSQILRQISNS*LLFCES
Trigger: AGACTCACAGAACAAAAGCAAGGAATTGCTGATTTG...TCGGAGTATTTGACTTTGGGGAAAAGGGCTGGCTCGGAGTCTAGACTCTTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp GTTCAAAGAATGATTGTCCCCACAAAGCACAACTTGGAGAATAGAGTGCTTACACCATATAGCAGGACTTaGGCCAGGGCAGGAATTAGT +
Preference number: 5 (lower is better)
Translates to: VQRMIVPTKHNLENRVLTPYSRT*ARAGIS
Trigger: ACTAATTCCTGCCCTGGCCAAAGTCCTGCTATATGG...TGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGGGACAATCATTCTTTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp GCCTTCCTCTCTAATGTTCAAAGAATGATTGTCCCCACAAAGCACAACTTGGAGCCCACAAAGCACAACTaGGAGAATAGAGTGCTTACA +
Preference number: 5 (lower is better)
Translates to: AFLSNVQRMIVPTKHNLEPTKHN*ENRVLT
Trigger: TGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGG...CTCCAAGTTGTGCTTTGTGGGGACAATCATTCTTTGAACATTAGAGAGGAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp GCCTTCCTCTCTAATGTTCAAAGAATGATTGTCCCCACAAAGCACAACTTGGAGCAATCCTCCAGGTCATaGAAGAACAGATGTGTATCT +
Preference number: 5 (lower is better)
Translates to: AFLSNVQRMIVPTKHNLEQSSRS*KNRCVS
Trigger: AGATACACATCTGTTCTTCAATGACCTGGAGGATTG...CTCCAAGTTGTGCTTTGTGGGGACAATCATTCTTTGAACATTAGAGAGGAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
CDS-3UTR CAA 90 bp GTTCAAAGAATGATTGTCCCCACAAAGCACAACTTGGAGAATAGAGTGCTTACACCGTCAGCGGAGAAGTaGTATGTGCTTAAATCTTGG +
Preference number: 5 (lower is better)
Translates to: VQRMIVPTKHNLENRVLTPSAEK*YVLKSW
Trigger: CCAAGATTTAAGCACATACAACTTCTCCGCTGACGG...TGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGGGACAATCATTCTTTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp GTTCAAAGAATGATTGTCCCCACAAAGCACAACTTGGAGAATAGAGTGCTTACAACTCCGAAGCCAATGTaGGGTACTTTCCTTCTCAGA +
Preference number: 5 (lower is better)
Translates to: VQRMIVPTKHNLENRVLTTPKPM*GTFLLR
Trigger: TCTGAGAAGGAAAGTACCCAACATTGGCTTCGGAGT...TGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGGGACAATCATTCTTTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp AGAATGATTGTCCCCACAAAGCACAACTTGGAGAATAGAGTGCTTACATTAGAAGGTCCATTGTGTGTGTaGTATTCACCAGCAAGTGAC +
Preference number: 5 (lower is better)
Translates to: RMIVPTKHNLENRVLTLEGPLCV*YSPASD
Trigger: GTCACTTGCTGGTGAATACAACACACACAATGGACC...TTCTAATGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGGGACAATCATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp CCAGCCACACAGGTACAAGAGCATAATTCCGGAGTAATGAGACTAGTCCATAAAAGCAATTCCTTGCTTTaGTTCTGTGAGTCTTACAGA +
Preference number: 5 (lower is better)
Translates to: PATQVQEHNSGVMRLVHKSNSLL*FCESYR
Trigger: TCTGTAAGACTCACAGAACAAAAGCAAGGAATTGCT...TTTATGGACTAGTCTCATTACTCCGGAATTATGCTCTTGTACCTGTGTGGCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp GTTCAAAGAATGATTGTCCCCACAAAGCACAACTTGGAGAATAGAGTGCTTACACAATCCTCCAGGTCATaGAAGAACAGATGTGTATCT +
Preference number: 5 (lower is better)
Translates to: VQRMIVPTKHNLENRVLTQSSRS*KNRCVS
Trigger: AGATACACATCTGTTCTTCAATGACCTGGAGGATTG...TGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGGGACAATCATTCTTTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
CDS-3UTR CAA 90 bp ACACAGGTACAAGAGCATAATTCCGGAGTAATGAGACTAGTCCATAAATTAAAAGGTGTGGAAGGTCCATaGTGTGTGTTGTATTCACCA +
Preference number: 5 (lower is better)
Translates to: TQVQEHNSGVMRLVHKLKGVEGP*CVLYSP
Trigger: TGGTGAATACAACACACACAATGGACCTTCCACACC...TTTTAATTTATGGACTAGTCTCATTACTCCGGAATTATGCTCTTGTACCTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS CCA 90 bp AATGTACCTTCATTAAAATGTCAAATTCAGCCACACACTCTGTATTaGAGATATCTATCCTCAGTGATAGAAACCTCCAATGTGGACTGG +
Preference number: 5 (lower is better)
Translates to: NVPSLKCQIQPHTLY*RYLSSVIETSNVDW
Trigger: CCAGTCCACATTGGAGGTTTCTATCACTGAGGATAGATATCTCCAATACAGAGTGTGTGGCTGAATTTGACATTTTAATGAAGGTACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475856.1
CDS-3UTR CAA 90 bp AGAATGATTGTCCCCACAAAGCACAACTTGGAGAATAGAGTGCTTACATTAGAACAAATCAGCAATTCCTaGCTTTTGTTCTGTGAGTCT +
Preference number: 5 (lower is better)
Translates to: RMIVPTKHNLENRVLTLEQISNS*LLFCES
Trigger: AGACTCACAGAACAAAAGCAAGGAATTGCTGATTTG...TTCTAATGTAAGCACTCTATTCTCCAAGTTGTGCTTTGTGGGGACAATCATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp ACACAGGTACAAGAGCATAATTCCGGAGTAATGAGACTAGTCCATAAATTAAAACTTAAATCTTGGCCATaGTCATCTGATGAGACGTCA +
Preference number: 5 (lower is better)
Translates to: TQVQEHNSGVMRLVHKLKLKSWP*SSDETS
Trigger: TGACGTCTCATCAGATGACAATGGCCAAGATTTAAG...TTTTAATTTATGGACTAGTCTCATTACTCCGGAATTATGCTCTTGTACCTGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS-3UTR CAA 90 bp ACACAGGTACAAGAGCATAATTCCGGAGTAATGAGACTAGTCCATAAATTAAAACAAATCAGCAATTCCTaGCTTTTGTTCTGTGAGTCT +
Preference number: 5 (lower is better)
Translates to: TQVQEHNSGVMRLVHKLKQISNS*LLFCES
Trigger: AGACTCACAGAACAAAAGCAAGGAATTGCTGATTTG...TTTTAATTTATGGACTAGTCTCATTACTCCGGAATTATGCTCTTGTACCTGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS CAA 72 bp GGGTCCGACGAGGCCGGGCTGACTGCGGCGGGCACGTaGCTGTCTCTGCCGTTGCCGCTGCCTCCGCCTCCT +
Preference number: 6 (lower is better)
Translates to: GSDEAGLTAAGT*LSLPLPLPPPP
Trigger: AGGAGGCGGAGGCAGCGGCAACGGCAGAGACAGCAACGTGCCCGCCGCAGTCAGCCCGGCCTCGTCGGACCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000611592.4
CDS CCA 72 bp GCCGTGCACGCCAGAGCCCAGGCACAGGTTGGCTCCTaGGGCCGAACTGTGGAAGCCGTCAGCGGAGAAGTT +
Preference number: 6 (lower is better)
Translates to: AVHARAQAQVGS*GRTVEAVSGEV
Trigger: AACTTCTCCGCTGACGGCTTCCACAGTTCGGCCCCAGGAGCCAACCTGTGCCTGGGCTCTGGCGTGCACGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317304.10
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS GCA 72 bp CGTAGGTGGACGTGGAGAGGGGCGAAGGGCAGATGCTaGTGGCCGGGACGTAGGGAGGGTTGTAGGATGAGC +
Preference number: 6 (lower is better)
Translates to: RRWTWRGAKGRC*WPGRREGCRMS
Trigger: GCTCATCCTACAACCCTCCCTACGTCCCGGCCAGCAGCATCTGCCCTTCGCCCCTCTCCACGTCCACCTACG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317304.10
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS GCA 72 bp GGACGTAGGTGGACGTGGAGAGGGGCGAAGGGCAGATaGTGCTGGCCGGGACGTAGGGAGGGTTGTAGGATG +
Preference number: 6 (lower is better)
Translates to: GRRWTWRGAKGR*CWPGRREGCRM
Trigger: CATCCTACAACCCTCCCTACGTCCCGGCCAGCAGCATCTGCCCTTCGCCCCTCTCCACGTCCACCTACGTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317304.10
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS GCA 72 bp GTCCCACACGAACACACGCTCAATCTCATTGTCCCCTaGCGGGGACGGGTCACTGCTCCTCTTAGACCGGCC +
Preference number: 6 (lower is better)
Translates to: VPHEHTLNLIVP*RGRVTAPLRPA
Trigger: GGCCGGTCTAAGAGGAGCAGTGACCCGTCCCCGGCAGGGGACAATGAGATTGAGCGTGTGTTCGTGTGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000317304.10
ENST00000327619.10
ENST00000357410.7
ENST00000458636.2
ENST00000497062.6
ENST00000611592.4
CDS TCA 72 bp GATGCTGCTGGCCGGGACGTAGGGAGGGTTGTAGGATaGGCCGTAATACTGGGGGTACTGGCTCTGGGGGAA +
Preference number: 6 (lower is better)
Translates to: DAAGRDVGRVVG*AVILGVLALGE
Trigger: TTCCCCCAGAGCCAGTACCCCCAGTATTACGGCTCATCCTACAACCCTCCCTACGTCCCGGCCAGCAGCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000317304.10
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS TCA 72 bp TTAGTGCCTTCAGGGAGTGGGTCAGCCAGAGGTCTGTaGGAGCTTCCAGCTCAGCTCGGAGCTGTAGCCAGG +
Preference number: 6 (lower is better)
Translates to: LVPSGSGSARGL*ELPAQLGAVAR
Trigger: CCTGGCTACAGCTCCGAGCTGAGCTGGAAGCTCTCACAGACCTCTGGCTGACCCACTCCCTGAAGGCACTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317304.10
ENST00000327619.10
ENST00000497062.6
ENST00000611592.4
CDS TCA 72 bp GGCCTCAGTTCCGGCAGGATTTCCCCAGGCTCTCCCTaGGTAAGCGATTTCCCTCCTGCAGCTTTCACAGGC +
Preference number: 6 (lower is better)
Translates to: GLSSGRISPGSP*VSDFPPAAFTG
Trigger: GCCTGTGAAAGCTGCAGGAGGGAAATCGCTTACTCAGGGAGAGCCTGGGGAAATCCTGCCGGAACTGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497428.1
CDS CCA 72 bp GGCCCGGTGCGGCCTGTCTGTGTCTCCCTCTTTCGCTaGTGTGGAAGGTCCATTGTGTGTGTTGTATTCACC +
Preference number: 6 (lower is better)
Translates to: GPVRPVCVSLFR*CGRSIVCVVFT
Trigger: GGTGAATACAACACACACAATGGACCTTCCACACCAGCGAAAGAGGGAGACACAGACAGGCCGCACCGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000317304.10
ENST00000327619.10
ENST00000357410.7
ENST00000458636.2
ENST00000497062.6
ENST00000611592.4
CDS CCA 72 bp GGCCGGGAGTTGATGAGGTTTAGTGCCTTCAGGGAGTaGGTCAGCCAGAGGTCTGTGAGAGCTTCCAGCTCA +
Preference number: 6 (lower is better)
Translates to: GRELMRFSAFRE*VSQRSVRASSS
Trigger: TGAGCTGGAAGCTCTCACAGACCTCTGGCTGACCCACTCCCTGAAGGCACTAAACCTCATCAACTCCCGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000317304.10
ENST00000327619.10
ENST00000497062.6
ENST00000611592.4
CDS GCA 72 bp GGAAGGATAGTCCTGGTGCACACTCCCGAAACCGGCTaGGTTGCCCAGTCCATTTCCTCCTTGATAGAACCC +
Preference number: 6 (lower is better)
Translates to: GRIVLVHTPETG*VAQSISSLIEP
Trigger: GGGTTCTATCAAGGAGGAAATGGACTGGGCAACGCAGCCGGTTTCGGGAGTGTGCACCAGGACTATCCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317304.10
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS GCA 72 bp TTCCCCAGGCTCTCCCTGAGTAAGCGATTTCCCTCCTaGAGCTTTCACAGGCCCATGGCCCTCTATCACACA +
Preference number: 6 (lower is better)
Translates to: FPRLSLSKRFPS*SFHRPMALYHT
Trigger: TGTGTGATAGAGGGCCATGGGCCTGTGAAAGCTGCAGGAGGGAAATCGCTTACTCAGGGAGAGCCTGGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497428.1
CDS CCA 72 bp GCTGTAGGAAGGGATTCCATAGGCTTGTGCTGGAGGTaGGTAAGCTGTATAGGGGGTAGCCTGCTGGATCCC +
Preference number: 6 (lower is better)
Translates to: AVGRDSIGLCWR*VSCIGGSLLDP
Trigger: GGGATCCAGCAGGCTACCCCCTATACAGCTTACCCACCTCCAGCACAAGCCTATGGAATCCCTTCCTACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000317304.10
ENST00000327619.10
ENST00000357410.7
ENST00000458636.2
ENST00000611592.4
CDS CCA 72 bp GCTGAAGGAAGGGATTCCATAGGCTTGTGCTGGAGGTaGGTAAGCTGTATAGGGGGTAGCCTGCTGGATCCC +
Preference number: 6 (lower is better)
Translates to: AEGRDSIGLCWR*VSCIGGSLLDP
Trigger: GGGATCCAGCAGGCTACCCCCTATACAGCTTACCCACCTCCAGCACAAGCCTATGGAATCCCTTCCTTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497062.6
CDS GCA 72 bp GATAGTCCTGGTGCACACTCCCGAAACCGGCTGCGTTaGCCAGTCCATTTCCTCCTTGATAGAACCCTGTTG +
Preference number: 6 (lower is better)
Translates to: DSPGAHSRNRLR*PVHFLLDRTLL
Trigger: CAACAGGGTTCTATCAAGGAGGAAATGGACTGGGCAACGCAGCCGGTTTCGGGAGTGTGCACCAGGACTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317304.10
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS CCA 72 bp CCAGCTCAGCTCGGAGCTGTAGCCAGGTCTCCCTTTTaGGAGTGCCTATCAACCCACCAACGTTGTTCTTGT +
Preference number: 6 (lower is better)
Translates to: PAQLGAVARSPF*ECLSTHQRCSC
Trigger: ACAAGAACAACGTTGGTGGGTTGATAGGCACTCCCAAAAGGGAGACCTGGCTACAGCTCCGAGCTGAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000317304.10
ENST00000327619.10
ENST00000497062.6
ENST00000611592.4
CDS CCA 72 bp GGTGCGGCCTGTCTGTGTCTCCCTCTTTCGCTGGTGTaGAAGGTCCATTGTGTGTGTTGTATTCACCGTGCA +
Preference number: 6 (lower is better)
Translates to: GAACLCLPLSLV*KVHCVCCIHRA
Trigger: TGCACGGTGAATACAACACACACAATGGACCTTCCACACCAGCGAAAGAGGGAGACACAGACAGGCCGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458636.2
CDS CCA 72 bp TGTTGTATTCACCAGCAAGTGACTCGGAACTCTGGTTaGGGACGTTGTGAGATGCCTCCTGGAGGACGTAGG +
Preference number: 6 (lower is better)
Translates to: CCIHQQVTRNSG*GRCEMPPGGRR
Trigger: CCTACGTCCTCCAGGAGGCATCTCACAACGTCCCCAACCAGAGTTCCGAGTCACTTGCTGGTGAATACAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317304.10
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS CCA 72 bp GGTGCGGCCTGTCTGTGTCTCCCTCTTTCGCTGGTGTaGAAGGTCCATTGTGTGTGTTGTATTCACCAGCAA +
Preference number: 6 (lower is better)
Translates to: GAACLCLPLSLV*KVHCVCCIHQQ
Trigger: TTGCTGGTGAATACAACACACACAATGGACCTTCCACACCAGCGAAAGAGGGAGACACAGACAGGCCGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317304.10
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS CCA 72 bp TGGCTTCTCCTTGTCCAATATCTGATTCCAGCACGCTaGCCTTTCTCTCGCTCCACACTCCCTCTTGCCACA +
Preference number: 6 (lower is better)
Translates to: WLLLVQYLIPAR*PFSRSTLPLAT
Trigger: TGTGGCAAGAGGGAGTGTGGAGCGAGAGAAAGGCCAGCGTGCTGGAATCAGATATTGGACAAGGAGAAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497428.1
CDS GCA 72 bp CCACACCATCACCGATCACCACGTAGACAGCTTTTCTaGCGAATCTCTGCATTATCCTCTCGAAGCAGCTCT +
Preference number: 6 (lower is better)
Translates to: PHHHRSPRRQLF*RISALSSRSSS
Trigger: AGAGCTGCTTCGAGAGGATAATGCAGAGATTCGGCAGAAAAGCTGTCTACGTGGTGATCGGTGATGGTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000317304.10
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS CAA 72 bp TCTGTGTCTCCCTCTTTCGCTGGTGTGGAAGGTCCATaGTGTGTGTTGTATTCACCAGCAAGTGACTCGGAA +
Preference number: 6 (lower is better)
Translates to: SVSPSFAGVEGP*CVLYSPASDSE
Trigger: TTCCGAGTCACTTGCTGGTGAATACAACACACACAATGGACCTTCCACACCAGCGAAAGAGGGAGACACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317304.10
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS CAA 90 bp TCACAATCCTCCAGGTCATTGAAGAACAGATGTGTATCTGCAAGGTaGAAGATCATCTCTTCCATCATAAGGCCAATGCGCACGGACGTC +
Preference number: 6 (lower is better)
Translates to: SQSSRSLKNRCVSAR*KIISSIIRPMRTDV
Trigger: GACGTCCGTGCGCATTGGCCTTATGATGGAAGAGATGATCTTCAACCTTGCAGATACACATCTGTTCTTCAATGACCTGGAGGATTGTGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
CDS CCA 72 bp TTTCCTTGTACCATTCGTTTCATTCCAGGTAGACACTaGAAACTGTCATCAGGATCACCCGGAAACCACTGG +
Preference number: 6 (lower is better)
Translates to: FPCTIRFIPGRH*KLSSGSPGNHW
Trigger: CCAGTGGTTTCCGGGTGATCCTGATGACAGTTTCCAGTGTCTACCTGGAATGAAACGAATGGTACAAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471081.1
CDS CAA 90 bp CTTTCCATTGCTCTTAAGATAAAGCAAAGAGTTCCGAACACAGCCTaGATCTGGCTTCTCCTTGTCCAATATCTGATTCCAGCACGCTGG +
Preference number: 6 (lower is better)
Translates to: LSIALKIKQRVPNTA*IWLLLVQYLIPARW
Trigger: CCAGCGTGCTGGAATCAGATATTGGACAAGGAGAAGCCAGATCAAGGCTGTGTTCGGAACTCTTTGCTTTATCTTAAGAGCAATGGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497428.1
CDS CCA 72 bp TTTAGGCTTGCTGCAGACTTCCCTTCATTGTATTTCTaGGTTGGATCCACTGTTTTCTGGATCCCAAGTCTC +
Preference number: 6 (lower is better)
Translates to: FRLAADFPSLYF*VGSTVFWIPSL
Trigger: GAGACTTGGGATCCAGAAAACAGTGGATCCAACCCAGAAATACAATGAAGGGAAGTCTGCAGCAAGCCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475856.1
CDS CCA 72 bp AAGATAAAGCAAAGAGTTCCGAACACAGCCTTGATCTaGCTTCTCCTTGTCCAATATCTGATTCCAGCACGC +
Preference number: 6 (lower is better)
Translates to: KIKQRVPNTALI*LLLVQYLIPAR
Trigger: GCGTGCTGGAATCAGATATTGGACAAGGAGAAGCCAGATCAAGGCTGTGTTCGGAACTCTTTGCTTTATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497428.1
CDS CAA 72 bp TCAGCGGAGAAGTTGTATGTGCTTAAATCTTGGCCATaGTCATCTGATGAGACGTCATCAACGTGGATCTGG +
Preference number: 6 (lower is better)
Translates to: SAEKLYVLKSWP*SSDETSSTWIW
Trigger: CCAGATCCACGTTGATGACGTCTCATCAGATGACAATGGCCAAGATTTAAGCACATACAACTTCTCCGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000317304.10
ENST00000327619.10
ENST00000357410.7
ENST00000497062.6
ENST00000611592.4
CDS CAA 72 bp TCCAGGTCATTGAAGAACAGATGTGTATCTGCAAGGTaGAAGATCATCTCTTCCATCATAAGGCCAATGCGC +
Preference number: 6 (lower is better)
Translates to: SRSLKNRCVSAR*KIISSIIRPMR
Trigger: GCGCATTGGCCTTATGATGGAAGAGATGATCTTCAACCTTGCAGATACACATCTGTTCTTCAATGACCTGGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327619.10
ENST00000357410.7
ENST00000458636.2
ENST00000497062.6
CDS CAA 90 bp TCATTTTTAGGCTTGCTGCAGACTTCCCTTCATTGTATTTCTGGGTaGGATCCACTGTTTTCTGGATCCCAAGTCTCTCTTCCTTGGTTT +
Preference number: 6 (lower is better)
Translates to: SFLGLLQTSLHCISG*DPLFSGSQVSLPWF
Trigger: AAACCAAGGAAGAGAGACTTGGGATCCAGAAAACAGTGGATCCAACCCAGAAATACAATGAAGGGAAGTCTGCAGCAAGCCTAAAAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475856.1
CDS CAA 72 bp GCTCTTAAGATAAAGCAAAGAGTTCCGAACACAGCCTaGATCTGGCTTCTCCTTGTCCAATATCTGATTCCA +
Preference number: 6 (lower is better)
Translates to: ALKIKQRVPNTA*IWLLLVQYLIP
Trigger: TGGAATCAGATATTGGACAAGGAGAAGCCAGATCAAGGCTGTGTTCGGAACTCTTTGCTTTATCTTAAGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497428.1
CDS CAA 72 bp AGATCACTAGTTCTACCATTTCCTTGTACCTCATCCTaGCTTATAACCTCTGACGGCTTTCCATTGCTCTTA +
Preference number: 6 (lower is better)
Translates to: RSLVLPFPCTSS*LITSDGFPLLL
Trigger: TAAGAGCAATGGAAAGCCGTCAGAGGTTATAAGCAAGGATGAGGTACAAGGAAATGGTAGAACTAGTGATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497428.1