RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EXTL3 (Homo sapiens)

Ensembl gene IDs: ENSG00000012232

Ensembl transcript IDs: ENST00000220562.9, ENST00000454906.6, ENST00000517738.1, ENST00000518223.1, ENST00000519288.5, ENST00000519886.5, ENST00000520679.1, ENST00000520940.1, ENST00000521473.5, ENST00000521532.5, ENST00000522698.1, ENST00000522725.5, ENST00000523149.5, ENST00000523271.1

Found 583 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCAAACCGGAGCAGCAAGCCGGCCACCCAGAGAACGAGGCGCTCCTaGACCCTGCGAGCCAGGACAAGGTGGCCAGGGGCGGCCCACAGA +
Preference number: 1 (lower is better)
Translates to: PNRSSKPATQRTRRS*TLRARTRWPGAAHR
Trigger: TCTGTGGGCCGCCCCTGGCCACCTTGTCCTGGCTCGCAGGGTGCAGGAGCGCCTCGTTCTCTGGGTGGCCGGCTTGCTGCTCCGGTTTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR CCA 90 bp GTGGCCAGGGGCGGCCCACAGACAGCCAAGGAGACCCGGGGTCTGTaGCGCCGCTTTCCCATCTCAAGCGAGTCACAGGTCGGCGGCTTT +
Preference number: 1 (lower is better)
Translates to: VARGGPQTAKETRGL*RRFPISSESQVGGF
Trigger: AAAGCCGCCGACCTGTGACTCGCTTGAGATGGGAAAGCGGCGCCACAGACCCCGGGTCTCCTTGGCTGTCTGTGGGCCGCCCCTGGCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR CCA 90 bp CAGAAAGATCCCATCCTTCCGGACAGGACCCCAGCTGGTGAGCCCTaGCCTGAGGCACAGTCCACACGGAGGAGCACTGCCCAGGGAGCC +
Preference number: 1 (lower is better)
Translates to: QKDPILPDRTPAGEP*PEAQSTRRSTAQGA
Trigger: GGCTCCCTGGGCAGTGCTCCTCCGTGTGGACTGTGCCTCAGGCCAGGGCTCACCAGCTGGGGTCCTGTCCGGAAGGATGGGATCTTTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR CCA 90 bp GAGCACTGCCCAGGGAGCCAGCGCTCACAGTGGCCTGCAGAGCCCTaGGACGGTGTTATGGTAAGACAGCCCAAACCGGAGCAGCAAGCC +
Preference number: 1 (lower is better)
Translates to: EHCPGSQRSQWPAEP*DGVMVRQPKPEQQA
Trigger: GGCTTGCTGCTCCGGTTTGGGCTGTCTTACCATAACACCGTCCCAGGGCTCTGCAGGCCACTGTGAGCGCTGGCTCCCTGGGCAGTGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR CCA 90 bp CCTGTGTTCTTGAGAGGCTGCAGTCCGGTGTGGGAGGCAGAGCAGTaGCCAGCACACAGCATGGTGAGGCGACAGAGCGTGGGGGCTCTA +
Preference number: 1 (lower is better)
Translates to: PVFLRGCSPVWEAEQ*PAHSMVRRQSVGAL
Trigger: TAGAGCCCCCACGCTCTGTCGCCTCACCATGCTGTGTGCTGGCCACTGCTCTGCCTCCCACACCGGACTGCAGCCTCTCAAGAACACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR TCA 90 bp ACACAGCATGGTGAGGCGACAGAGCGTGGGGGCTCTAATAGGAGGTaGGCAGGGCACTCAGCCAGGCGCTGGCGCTCAAACCTAGCGGAA +
Preference number: 1 (lower is better)
Translates to: TQHGEATERGGSNRR*AGHSARRWRSNLAE
Trigger: TTCCGCTAGGTTTGAGCGCCAGCGCCTGGCTGAGTGCCCTGCTCACCTCCTATTAGAGCCCCCACGCTCTGTCGCCTCACCATGCTGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR GCA 90 bp CCTTGCTGCCTCTCGCTGAGGAGGGCGTGCCCCTCAGAGCCTGTCTaGAGTCCTTCAAGCCAGTGTTCCTTTCAGGGTCAAGGAGGGCTG +
Preference number: 1 (lower is better)
Translates to: PCCLSLRRACPSEPV*SPSSQCSFQGQGGL
Trigger: CAGCCCTCCTTGACCCTGAAAGGAACACTGGCTTGAAGGACTGCAGACAGGCTCTGAGGGGCACGCCCTCCTCAGCGAGAGGCAGCAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR GCA 90 bp CCAGTGACACTGTGGCCACCTTGCTGCCTCTCGCTGAGGAGGGCGTaGCCCTCAGAGCCTGTCTGCAGTCCTTCAAGCCAGTGTTCCTTT +
Preference number: 1 (lower is better)
Translates to: PVTLWPPCCLSLRRA*PSEPVCSPSSQCSF
Trigger: AAAGGAACACTGGCTTGAAGGACTGCAGACAGGCTCTGAGGGGCACGCCCTCCTCAGCGAGAGGCAGCAAGGTGGCCACAGTGTCACTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR GCA 90 bp GGAGTAGTTGGAGTTGTAGAGCCAGGACTGATGGGGGATGTCCCATaGGTGGTAACGGCCAGGGAAGCCCACGATGCGGTCCCGAGCTTC +
Preference number: 1 (lower is better)
Translates to: GVVGVVEPGLMGDVP*VVTAREAHDAVPSF
Trigger: GAAGCTCGGGACCGCATCGTGGGCTTCCCTGGCCGTTACCACGCATGGGACATCCCCCATCAGTCCTGGCTCTACAACTCCAACTACTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522698.1
3UTR CCA 90 bp GCCTGGTCAGGCTGCCTCCCATCGTCTTCTGCGAGCAGGCCCAGCTaGCATACACAGGTGGCGACCTGGAATCAAGCAATCAAGCAGGTG +
Preference number: 1 (lower is better)
Translates to: AWSGCLPSSSASRPS*HTQVATWNQAIKQV
Trigger: CACCTGCTTGATTGCTTGATTCCAGGTCGCCACCTGTGTATGCCAGCTGGGCCTGCTCGCAGAAGACGATGGGAGGCAGCCTGACCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR CCA 90 bp TCCCACAGCCAAGCACAAGATCTAGGCCTGTGGGCACCAACAGGATaGGGCTCTGCAGTCAGGGAGCGTCAGCTCGGTGCAGGTACAGGT +
Preference number: 1 (lower is better)
Translates to: SHSQAQDLGLWAPTG*GSAVRERQLGAGTG
Trigger: ACCTGTACCTGCACCGAGCTGACGCTCCCTGACTGCAGAGCCCCATCCTGTTGGTGCCCACAGGCCTAGATCTTGTGCTTGGCTGTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR GCA 90 bp GTGGCTGACTTCAAGATAAAGGCAGCGGTTTCCTTCCACTCCTCCTaGTGCCCCTTCCAGCAGAGGCTCTGGGCCACCCACCAGCAGATG +
Preference number: 1 (lower is better)
Translates to: VADFKIKAAVSFHSS*CPFQQRLWATHQQM
Trigger: CATCTGCTGGTGGGTGGCCCAGAGCCTCTGCTGGAAGGGGCAGCAGGAGGAGTGGAAGGAAACCGCTGCCTTTATCTTGAAGTCAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR GCA 90 bp CCAAGCACAAGATCTAGGCCTGTGGGCACCAACAGGATGGGGCTCTaGAGTCAGGGAGCGTCAGCTCGGTGCAGGTACAGGTGCCTTAGT +
Preference number: 1 (lower is better)
Translates to: PSTRSRPVGTNRMGL*SQGASARCRYRCLS
Trigger: ACTAAGGCACCTGTACCTGCACCGAGCTGACGCTCCCTGACTGCAGAGCCCCATCCTGTTGGTGCCCACAGGCCTAGATCTTGTGCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR CCA 90 bp ATCCCAAGGCAGGCGCCTTGCTGTAAAACTTCCCGGCCAGCCGGGTaGGTTCCTCGAAGGACACTGGCTTGCTCTACACTAGGGAGAGGA +
Preference number: 1 (lower is better)
Translates to: IPRQAPCCKTSRPAG*VPRRTLACSTLGRG
Trigger: TCCTCTCCCTAGTGTAGAGCAAGCCAGTGTCCTTCGAGGAACCCACCCGGCTGGCCGGGAAGTTTTACAGCAAGGCGCCTGCCTTGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR TCA 90 bp ATAGGTCAGGGGCATGACCTATGGACCGAATCGAGCCATTCACAGTaGGGCCTCACCTGTCCTGGGATCGCAGGCACACACAGCTCCCCA +
Preference number: 1 (lower is better)
Translates to: IGQGHDLWTESSHSQ*GLTCPGIAGTHSSP
Trigger: TGGGGAGCTGTGTGTGCCTGCGATCCCAGGACAGGTGAGGCCTCACTGTGAATGGCTCGATTCGGTCCATAGGTCATGCCCCTGACCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR CCA 90 bp GCCTCCCATCGTCTTCTGCGAGCAGGCCCAGCTGGCATACACAGGTaGCGACCTGGAATCAAGCAATCAAGCAGGTGCCTTCTCTCAGGT +
Preference number: 1 (lower is better)
Translates to: ASHRLLRAGPAGIHR*RPGIKQSSRCLLSG
Trigger: ACCTGAGAGAAGGCACCTGCTTGATTGCTTGATTCCAGGTCGCCACCTGTGTATGCCAGCTGGGCCTGCTCGCAGAAGACGATGGGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR GCA 90 bp ACAAGGCCAGGACCCATCTCCGCCAGAATACAGAACAAAGGAGCCTaGGCGGTCCCTCCCTTAGAAAGGCAAAACTCACACTCCCCCAGC +
Preference number: 1 (lower is better)
Translates to: TRPGPISARIQNKGA*AVPPLERQNSHSPS
Trigger: GCTGGGGGAGTGTGAGTTTTGCCTTTCTAAGGGAGGGACCGCGCAGGCTCCTTTGTTCTGTATTCTGGCGGAGATGGGTCCTGGCCTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR GCA 90 bp AAGGAGGGCTGTCCTTGTTGGAAGCACCGGCACCACAGCCCTCCCTaGGGCATGTTTTGGTGTCAGACCACTCAGCCCTTCTTAGATCCA +
Preference number: 1 (lower is better)
Translates to: KEGCPCWKHRHHSPP*GMFWCQTTQPFLDP
Trigger: TGGATCTAAGAAGGGCTGAGTGGTCTGACACCAAAACATGCCGCAGGGAGGGCTGTGGTGCCGGTGCTTCCAACAAGGACAGCCCTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR CCA 90 bp CTTCAAGCCAGTGTTCCTTTCAGGGTCAAGGAGGGCTGTCCTTGTTaGAAGCACCGGCACCACAGCCCTCCCTGCGGCATGTTTTGGTGT +
Preference number: 1 (lower is better)
Translates to: LQASVPFRVKEGCPC*KHRHHSPPCGMFWC
Trigger: ACACCAAAACATGCCGCAGGGAGGGCTGTGGTGCCGGTGCTTCCAACAAGGACAGCCCTCCTTGACCCTGAAAGGAACACTGGCTTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR CCA 90 bp GAAAACTATGGAACTCCTGTGTTCTTGAGAGGCTGCAGTCCGGTGTaGGAGGCAGAGCAGTGGCCAGCACACAGCATGGTGAGGCGACAG +
Preference number: 1 (lower is better)
Translates to: ENYGTPVFLRGCSPV*EAEQWPAHSMVRRQ
Trigger: CTGTCGCCTCACCATGCTGTGTGCTGGCCACTGCTCTGCCTCCCACACCGGACTGCAGCCTCTCAAGAACACAGGAGTTCCATAGTTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR TCA 90 bp GTTCCTCGAAGGACACTGGCTTGCTCTACACTAGGGAGAGGAGGCTaGCCTGCAAACCACTTCAGACCACAGCAGATGTGCACGCTGCTG +
Preference number: 1 (lower is better)
Translates to: VPRRTLACSTLGRGG*PANHFRPQQMCTLL
Trigger: CAGCAGCGTGCACATCTGCTGTGGTCTGAAGTGGTTTGCAGGTCAGCCTCCTCTCCCTAGTGTAGAGCAAGCCAGTGTCCTTCGAGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR TCA 90 bp CTCGGTGCAGGTACAGGTGCCTTAGTGACCTATAGGTCAGGGGCATaGCCTATGGACCGAATCGAGCCATTCACAGTGAGGCCTCACCTG +
Preference number: 1 (lower is better)
Translates to: LGAGTGALVTYRSGA*PMDRIEPFTVRPHL
Trigger: CAGGTGAGGCCTCACTGTGAATGGCTCGATTCGGTCCATAGGTCATGCCCCTGACCTATAGGTCACTAAGGCACCTGTACCTGCACCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR GCA 90 bp GTCTCACCCATTCTTAGGACTGTCAGTGTGACCAAAGCTGCCACCTaGAGAGCCCAGGAGAGGAGTCCTCGCCTTTACCCCCTTTCCCAT +
Preference number: 1 (lower is better)
Translates to: VSPILRTVSVTKAAT*RAQERSPRLYPLSH
Trigger: ATGGGAAAGGGGGTAAAGGCGAGGACTCCTCTCCTGGGCTCTGCAGGTGGCAGCTTTGGTCACACTGACAGTCCTAAGAATGGGTGAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR CCA 90 bp CCTTGTTGGAAGCACCGGCACCACAGCCCTCCCTGCGGCATGTTTTaGTGTCAGACCACTCAGCCCTTCTTAGATCCACCAGTGACATTC +
Preference number: 1 (lower is better)
Translates to: PCWKHRHHSPPCGMF*CQTTQPFLDPPVTF
Trigger: GAATGTCACTGGTGGATCTAAGAAGGGCTGAGTGGTCTGACACCAAAACATGCCGCAGGGAGGGCTGTGGTGCCGGTGCTTCCAACAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR CCA 90 bp AGAAGGCAGCACCTGTCAGCACCATGGACAGCTCACAGGAGTAGTTaGAGTTGTAGAGCCAGGACTGATGGGGGATGTCCCATGCGTGGT +
Preference number: 1 (lower is better)
Translates to: RRQHLSAPWTAHRSS*SCRARTDGGCPMRG
Trigger: ACCACGCATGGGACATCCCCCATCAGTCCTGGCTCTACAACTCCAACTACTCCTGTGAGCTGTCCATGGTGCTGACAGGTGCTGCCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522698.1
3UTR TCA 90 bp CTAAAGATAAATCCTCAAAAATCGCTGGCCCCAGCAGCAGGAAGCTaGACAGCCCACCAGGGTCAGGCGCTCCCAGGGATTCACTGGGAA +
Preference number: 1 (lower is better)
Translates to: LKINPQKSLAPAAGS*TAHQGQALPGIHWE
Trigger: TTCCCAGTGAATCCCTGGGAGCGCCTGACCCTGGTGGGCTGTTCAGCTTCCTGCTGCTGGGGCCAGCGATTTTTGAGGATTTATCTTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR GCA 90 bp TCGAAGGACACTGGCTTGCTCTACACTAGGGAGAGGAGGCTGACCTaGAAACCACTTCAGACCACAGCAGATGTGCACGCTGCTGATCTC +
Preference number: 1 (lower is better)
Translates to: SKDTGLLYTRERRLT*KPLQTTADVHAADL
Trigger: GAGATCAGCAGCGTGCACATCTGCTGTGGTCTGAAGTGGTTTGCAGGTCAGCCTCCTCTCCCTAGTGTAGAGCAAGCCAGTGTCCTTCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR CCA 90 bp CCGCAAGAGGGCCAAGTTCATCCCTTTCTGGTTGCTGCACACAGATaGCGCTGGGGAGGATGGGAGATGATCTTTAAGGATAAGCCAGTG +
Preference number: 1 (lower is better)
Translates to: PQEGQVHPFLVAAHR*RWGGWEMIFKDKPV
Trigger: CACTGGCTTATCCTTAAAGATCATCTCCCATCCTCCCCAGCGCCATCTGTGTGCAGCAACCAGAAAGGGATGAACTTGGCCCTCTTGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR TCA 90 bp GTAAAAACCACGAACCAGCTGTCCTGGGCGTACGAACGGTGTGAGTaGCTCTGCAGAGTCGCCACAGTCCTCAGTGTAAGCTATCAGTCA +
Preference number: 1 (lower is better)
Translates to: VKTTNQLSWAYERCE*LCRVATVLSVSYQS
Trigger: TGACTGATAGCTTACACTGAGGACTGTGGCGACTCTGCAGAGTCACTCACACCGTTCGTACGCCCAGGACAGCTGGTTCGTGGTTTTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR CCA 90 bp GTTCATCCCTTTCTGGTTGCTGCACACAGATGGCGCTGGGGAGGATaGGAGATGATCTTTAAGGATAAGCCAGTGACACAAGGCCAGGAC +
Preference number: 1 (lower is better)
Translates to: VHPFLVAAHRWRWGG*EMIFKDKPVTQGQD
Trigger: GTCCTGGCCTTGTGTCACTGGCTTATCCTTAAAGATCATCTCCCATCCTCCCCAGCGCCATCTGTGTGCAGCAACCAGAAAGGGATGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR TCA 90 bp GAATGTAAAAACCACGAACCAGCTGTCCTGGGCGTACGAACGGTGTaGGTGACTCTGCAGAGTCGCCACAGTCCTCAGTGTAAGCTATCA +
Preference number: 1 (lower is better)
Translates to: ECKNHEPAVLGVRTV*VTLQSRHSPQCKLS
Trigger: TGATAGCTTACACTGAGGACTGTGGCGACTCTGCAGAGTCACTCACACCGTTCGTACGCCCAGGACAGCTGGTTCGTGGTTTTTACATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR TCA 90 bp ATGACATCTCACCCATCAGCTGCTGCAAACTTGCCTGATCAGTCGTaGACCCCACTTGAGGAGGGACACCGACTGTTAAGTCTCACCCAT +
Preference number: 1 (lower is better)
Translates to: MTSHPSAAANLPDQS*TPLEEGHRLLSLTH
Trigger: ATGGGTGAGACTTAACAGTCGGTGTCCCTCCTCAAGTGGGGTTCACGACTGATCAGGCAAGTTTGCAGCAGCTGATGGGTGAGATGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR TCA 90 bp AGCTTGACAGCCAAAACTCCAGACCCAAAGAGGAATGCCCCTCGATaGCATCTCACCCATCAGCTGCTGCAAACTTGCCTGATCAGTCGT +
Preference number: 1 (lower is better)
Translates to: SLTAKTPDPKRNAPR*HLTHQLLQTCLISR
Trigger: ACGACTGATCAGGCAAGTTTGCAGCAGCTGATGGGTGAGATGTCATCGAGGGGCATTCCTCTTTGGGTCTGGAGTTTTGGCTGTCAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR GCA 90 bp GCTGGCATACACAGGTGGCGACCTGGAATCAAGCAATCAAGCAGGTaGCTTCTCTCAGGTCACTCTTCCATACTTGCTGAGGAAAACCAC +
Preference number: 1 (lower is better)
Translates to: AGIHRWRPGIKQSSR*LLSGHSSILAEENH
Trigger: GTGGTTTTCCTCAGCAAGTATGGAAGAGTGACCTGAGAGAAGGCACCTGCTTGATTGCTTGATTCCAGGTCGCCACCTGTGTATGCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR GCA 90 bp GAAGAACAGGAGCTTGACAGCCAAAACTCCAGACCCAAAGAGGAATaGCCCTCGATGACATCTCACCCATCAGCTGCTGCAAACTTGCCT +
Preference number: 1 (lower is better)
Translates to: EEQELDSQNSRPKEE*PSMTSHPSAAANLP
Trigger: AGGCAAGTTTGCAGCAGCTGATGGGTGAGATGTCATCGAGGGGCATTCCTCTTTGGGTCTGGAGTTTTGGCTGTCAAGCTCCTGTTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR CCA 90 bp GAGGGCCAAGTTCATCCCTTTCTGGTTGCTGCACACAGATGGCGCTaGGGAGGATGGGAGATGATCTTTAAGGATAAGCCAGTGACACAA +
Preference number: 1 (lower is better)
Translates to: EGQVHPFLVAAHRWR*GGWEMIFKDKPVTQ
Trigger: TTGTGTCACTGGCTTATCCTTAAAGATCATCTCCCATCCTCCCCAGCGCCATCTGTGTGCAGCAACCAGAAAGGGATGAACTTGGCCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR TCA 90 bp AGGACAATCGTAACATGGAGATGGATGGCTGGAAGAACAGGAGCTTaGCAGCCAAAACTCCAGACCCAAAGAGGAATGCCCCTCGATGAC +
Preference number: 1 (lower is better)
Translates to: RTIVTWRWMAGRTGA*QPKLQTQRGMPLDD
Trigger: GTCATCGAGGGGCATTCCTCTTTGGGTCTGGAGTTTTGGCTGTCAAGCTCCTGTTCTTCCAGCCATCCATCTCCATGTTACGATTGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR TCA 90 bp TCTCTCCACACCCGGAACCCAAACATGATTTCGTCATGGCGGAGGTaGGCATCGTCATCAATGGACAGGATGGCCTCTGTCTCAATTTCA +
Preference number: 1 (lower is better)
Translates to: SLHTRNPNMISSWRR*ASSSMDRMASVSIS
Trigger: TGAAATTGAGACAGAGGCCATCCTGTCCATTGATGACGATGCTCACCTCCGCCATGACGAAATCATGTTTGGGTTCCGGGTGTGGAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522698.1
3UTR CCA 90 bp AAGTCTCTCTGGTCCCAGGACAATCGTAACATGGAGATGGATGGCTaGAAGAACAGGAGCTTGACAGCCAAAACTCCAGACCCAAAGAGG +
Preference number: 1 (lower is better)
Translates to: KSLWSQDNRNMEMDG*KNRSLTAKTPDPKR
Trigger: CCTCTTTGGGTCTGGAGTTTTGGCTGTCAAGCTCCTGTTCTTCCAGCCATCCATCTCCATGTTACGATTGTCCTGGGACCAGAGAGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR CCA 90 bp GGTAGGCATAATACTTGTGAAAGAAGGCAGCACCTGTCAGCACCATaGACAGCTCACAGGAGTAGTTGGAGTTGTAGAGCCAGGACTGAT +
Preference number: 1 (lower is better)
Translates to: GRHNTCERRQHLSAP*TAHRSSWSCRARTD
Trigger: ATCAGTCCTGGCTCTACAACTCCAACTACTCCTGTGAGCTGTCCATGGTGCTGACAGGTGCTGCCTTCTTTCACAAGTATTATGCCTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522698.1
3UTR GCA 90 bp CAGAATCCTAAGCAGGGAGTGGAAAGTGGTAACTCGGGTTGTGAATaGCCGTTAGATTCCAAGGCTGGATGTGAGCTTACACAGCAAATC +
Preference number: 1 (lower is better)
Translates to: QNPKQGVESGNSGCE*PLDSKAGCELTQQI
Trigger: GATTTGCTGTGTAAGCTCACATCCAGCCTTGGAATCTAACGGGCATTCACAACCCGAGTTACCACTTTCCACTCCCTGCTTAGGATTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR CCA 90 bp ACAGCACGTGTGTTTCAACAGAAGAGCAGGATAGAAAGAGCCATCTaGGAGTGGCGTCTTCAGCCCCTATTCTTTCTCACTCTTTGCTTC +
Preference number: 1 (lower is better)
Translates to: TARVFQQKSRIERAI*EWRLQPLFFLTLCF
Trigger: GAAGCAAAGAGTGAGAAAGAATAGGGGCTGAAGACGCCACTCCCAGATGGCTCTTTCTATCCTGCTCTTCTGTTGAAACACACGTGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR CCA 90 bp GAAGACACATTTTCTACAGCCTCATGCCACCTTCTCAAGTCTCTCTaGTCCCAGGACAATCGTAACATGGAGATGGATGGCTGGAAGAAC +
Preference number: 1 (lower is better)
Translates to: EDTFSTASCHLLKSL*SQDNRNMEMDGWKN
Trigger: GTTCTTCCAGCCATCCATCTCCATGTTACGATTGTCCTGGGACCAGAGAGACTTGAGAAGGTGGCATGAGGCTGTAGAAAATGTGTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR TCA 90 bp GCAATCAAGCAGGTGCCTTCTCTCAGGTCACTCTTCCATACTTGCTaGGGAAAACCACAAAAGACCTCCAAGCTGCTTGAGTTAAAGTCT +
Preference number: 1 (lower is better)
Translates to: AIKQVPSLRSLFHTC*GKPQKTSKLLELKS
Trigger: AGACTTTAACTCAAGCAGCTTGGAGGTCTTTTGTGGTTTTCCTCAGCAAGTATGGAAGAGTGACCTGAGAGAAGGCACCTGCTTGATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR TCA 90 bp AGCCAGGCGCTGGCGCTCAAACCTAGCGGAAGGCAGAAAGAGCCATaGAGAAGTGGACACTATTTTACTCCAGTAATAGTTCATTTTTAT +
Preference number: 1 (lower is better)
Translates to: SQALALKPSGRQKEP*RSGHYFTPVIVHFY
Trigger: ATAAAAATGAACTATTACTGGAGTAAAATAGTGTCCACTTCTTCATGGCTCTTTCTGCCTTCCGCTAGGTTTGAGCGCCAGCGCCTGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR CCA 90 bp TTTCTCACTCTTTGCTTCCTCATTCTCTCTCAAACAAGAGAGAAATaGGAGAGCAGGGATAAGTACGGAGGCAAGCCTGGCCTAAAGATA +
Preference number: 1 (lower is better)
Translates to: FLTLCFLILSQTREK*ESRDKYGGKPGLKI
Trigger: TATCTTTAGGCCAGGCTTGCCTCCGTACTTATCCCTGCTCTCCCATTTCTCTCTTGTTTGAGAGAGAATGAGGAAGCAAAGAGTGAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR TCA 90 bp CCACTGAAGTCAGTATGTGAGTTCCTCACATTAAAAGAAACCAGATaGAATAGCAGCCACAATATAGCGCCACACACCACACTCTTTGGC +
Preference number: 1 (lower is better)
Translates to: PLKSVCEFLTLKETR*NSSHNIAPHTTLFG
Trigger: GCCAAAGAGTGTGGTGTGTGGCGCTATATTGTGGCTGCTATTTCATCTGGTTTCTTTTAATGTGAGGAACTCACATACTGACTTCAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR-3UTR GCA 90 bp AGGCGCTCCTGCACCCTGCGAGCCAGGACAAGGTGGCCAGGGGCGGCCCACAGACCAAGGCAGGCGCCTTaGTGTAAAACTTCCCGGCCA +
Preference number: 2 (lower is better)
Translates to: RRSCTLRARTRWPGAAHRPRQAP*CKTSRP
Trigger: TGGCCGGGAAGTTTTACAGCAAGGCGCCTGCCTTGG...TCTGTGGGCCGCCCCTGGCCACCTTGTCCTGGCTCGCAGGGTGCAGGAGCGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR-3UTR CCA 90 bp ATTCACAGTGAGGCCTCACCTGTCCTGGGATCGCAGGCACACACAGCTCCCCACCGAGCCAGGACAAGGTaGCCAGGGGCGGCCCACAGA +
Preference number: 2 (lower is better)
Translates to: IHSEASPVLGSQAHTAPHRARTR*PGAAHR
Trigger: TCTGTGGGCCGCCCCTGGCCACCTTGTCCTGGCTCG...GTGGGGAGCTGTGTGTGCCTGCGATCCCAGGACAGGTGAGGCCTCACTGTGAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR-3UTR TCA 90 bp GCGGCCCACAGACAGCCAAGGAGACCCGGGGTCTGTGGCGCCGCTTTCCCATCTCAGGCCCAGTGTGGCTaGCTTCAAGATAAAGGCAGC +
Preference number: 2 (lower is better)
Translates to: AAHRQPRRPGVCGAAFPSQAQCG*LQDKGS
Trigger: GCTGCCTTTATCTTGAAGTCAGCCACACTGGGCCTG...AGATGGGAAAGCGGCGCCACAGACCCCGGGTCTCCTTGGCTGTCTGTGGGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR-3UTR TCA 90 bp TCCCAGAAAGATCCCATCCTTCCGGACAGGACCCCAGCTGGTGAGCCCTGGCCTCCAGCAGCAGGAAGCTaGACAGCCCACCAGGGTCAG +
Preference number: 2 (lower is better)
Translates to: SQKDPILPDRTPAGEPWPPAAGS*TAHQGQ
Trigger: CTGACCCTGGTGGGCTGTTCAGCTTCCTGCTGCTGG...AGGCCAGGGCTCACCAGCTGGGGTCCTGTCCGGAAGGATGGGATCTTTCTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR-3UTR GCA 90 bp ATTCACAGTGAGGCCTCACCTGTCCTGGGATCGCAGGCACACACAGCTCCCCACGCGCTCACAGTGGCCTaGAGAGCCCTGGGACGGTGT +
Preference number: 2 (lower is better)
Translates to: IHSEASPVLGSQAHTAPHALTVA*RALGRC
Trigger: ACACCGTCCCAGGGCTCTGCAGGCCACTGTGAGCGC...GTGGGGAGCTGTGTGTGCCTGCGATCCCAGGACAGGTGAGGCCTCACTGTGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR CAA 90 bp CGGGGAACCTTTGGAAACACAGTCCTGGCGGCGGCCGGGTCCGGTTaGCCAATGGGGAGAGTTCCCTTAAGCCGAGCTAGCCCTACAGGT +
Preference number: 2 (lower is better)
Translates to: RGTFGNTVLAAAGSG*PMGRVPLSRASPTG
Trigger: ACCTGTAGGGCTAGCTCGGCTTAAGGGAACTCTCCCCATTGGCAAACCGGACCCGGCCGCCGCCAGGACTGTGTTTCCAAAGGTTCCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR-3UTR GCA 90 bp AGGCGCTCCTGCACCCTGCGAGCCAGGACAAGGTGGCCAGGGGCGGCCCACAGAAATAGAAGCACAGGATaGCAAGGTCTAGGGAAGACG +
Preference number: 2 (lower is better)
Translates to: RRSCTLRARTRWPGAAHRNRSTG*QGLGKT
Trigger: CGTCTTCCCTAGACCTTGGCATCCTGTGCTTCTATT...TCTGTGGGCCGCCCCTGGCCACCTTGTCCTGGCTCGCAGGGTGCAGGAGCGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR-3UTR GCA 90 bp TCCCACAGCCAAGCACAAGATCTAGGCCTGTGGGCACCAACAGGATGGGGCTCTTCGCTGAGGAGGGCGTaGCCCTCAGAGCCTGTCTGC +
Preference number: 2 (lower is better)
Translates to: SHSQAQDLGLWAPTGWGSSLRRA*PSEPVC
Trigger: GCAGACAGGCTCTGAGGGGCACGCCCTCCTCAGCGA...AGAGCCCCATCCTGTTGGTGCCCACAGGCCTAGATCTTGTGCTTGGCTGTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR-3UTR CCA 90 bp CCCAGAAAGATCCCATCCTTCCGGACAGGACCCCAGCTGGTGAGCCCTGGCCTGGCACACAGATGGCGCTaGGGAGGATGGGAGATGATC +
Preference number: 2 (lower is better)
Translates to: PRKIPSFRTGPQLVSPGLAHRWR*GGWEMI
Trigger: GATCATCTCCCATCCTCCCCAGCGCCATCTGTGTGC...CAGGCCAGGGCTCACCAGCTGGGGTCCTGTCCGGAAGGATGGGATCTTTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR-3UTR CCA 90 bp ATTCACAGTGAGGCCTCACCTGTCCTGGGATCGCAGGCACACACAGCTCCCCACGGGGCGGGGAACCTTTaGAAACACAGTCCTGGCGGC +
Preference number: 2 (lower is better)
Translates to: IHSEASPVLGSQAHTAPHGAGNL*KHSPGG
Trigger: GCCGCCAGGACTGTGTTTCCAAAGGTTCCCCGCCCC...GTGGGGAGCTGTGTGTGCCTGCGATCCCAGGACAGGTGAGGCCTCACTGTGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR-3UTR TCA 90 bp TCCCAGAAAGATCCCATCCTTCCGGACAGGACCCCAGCTGGTGAGCCCTGGCCTCACTTCAGAAACGCCTaGGGCCCACAGCACGTGTGT +
Preference number: 2 (lower is better)
Translates to: SQKDPILPDRTPAGEPWPHFRNA*GPQHVC
Trigger: ACACACGTGCTGTGGGCCTCAGGCGTTTCTGAAGTG...AGGCCAGGGCTCACCAGCTGGGGTCCTGTCCGGAAGGATGGGATCTTTCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR-3UTR GCA 90 bp GGCCTGGTCAGGCTGCCTCCCATCGTCTTCTGCGAGCAGGCCCAGCTGGCATACAGACCACAGCAGATGTaGACGCTGCTGATCTCCTGT +
Preference number: 2 (lower is better)
Translates to: GLVRLPPIVFCEQAQLAYRPQQM*TLLISC
Trigger: ACAGGAGATCAGCAGCGTGCACATCTGCTGTGGTCT...GTATGCCAGCTGGGCCTGCTCGCAGAAGACGATGGGAGGCAGCCTGACCAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR-3UTR GCA 90 bp TCCCAGAAAGATCCCATCCTTCCGGACAGGACCCCAGCTGGTGAGCCCTGGCCTCACCACAGCCCTCCCTaGGGCATGTTTTGGTGTCAG +
Preference number: 2 (lower is better)
Translates to: SQKDPILPDRTPAGEPWPHHSPP*GMFWCQ
Trigger: CTGACACCAAAACATGCCGCAGGGAGGGCTGTGGTG...AGGCCAGGGCTCACCAGCTGGGGTCCTGTCCGGAAGGATGGGATCTTTCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR-3UTR CCA 90 bp CCCAGAAAGATCCCATCCTTCCGGACAGGACCCCAGCTGGTGAGCCCTGGCCTGACACACCACACTCTTTaGCTCCCCGAGGGAAGAAGG +
Preference number: 2 (lower is better)
Translates to: PRKIPSFRTGPQLVSPGLTHHTL*LPEGRR
Trigger: CCTTCTTCCCTCGGGGAGCCAAAGAGTGTGGTGTGT...CAGGCCAGGGCTCACCAGCTGGGGTCCTGTCCGGAAGGATGGGATCTTTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR-3UTR GCA 90 bp CAAGGCCAGGACCCATCTCCGCCAGAATACAGAACAAAGGAGCCTGCGCGGTCCCCCAAGGTCCTGCAATaGCTAGGAACCTTGGGAGCC +
Preference number: 2 (lower is better)
Translates to: QGQDPSPPEYRTKEPARSPKVLQ*LGTLGA
Trigger: GGCTCCCAAGGTTCCTAGGCATTGCAGGACCTTGGG...GGACCGCGCAGGCTCCTTTGTTCTGTATTCTGGCGGAGATGGGTCCTGGCCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR-3UTR CCA 90 bp ATTCACAGTGAGGCCTCACCTGTCCTGGGATCGCAGGCACACACAGCTCCCCACCGTGACGAAAAGGGGTaGGGTGGATGGACGTGGCAT +
Preference number: 2 (lower is better)
Translates to: IHSEASPVLGSQAHTAPHRDEKG*GGWTWH
Trigger: ATGCCACGTCCATCCACCCCACCCCTTTTCGTCACG...GTGGGGAGCTGTGTGTGCCTGCGATCCCAGGACAGGTGAGGCCTCACTGTGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR CAA 90 bp CCTTCAAGCCAGTGTTCCTTTCAGGGTCAAGGAGGGCTGTCCTTGTaGGAAGCACCGGCACCACAGCCCTCCCTGCGGCATGTTTTGGTG +
Preference number: 2 (lower is better)
Translates to: PSSQCSFQGQGGLSL*EAPAPQPSLRHVLV
Trigger: CACCAAAACATGCCGCAGGGAGGGCTGTGGTGCCGGTGCTTCCAACAAGGACAGCCCTCCTTGACCCTGAAAGGAACACTGGCTTGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR CAA 90 bp AGTCCTTCAAGCCAGTGTTCCTTTCAGGGTCAAGGAGGGCTGTCCTaGTTGGAAGCACCGGCACCACAGCCCTCCCTGCGGCATGTTTTG +
Preference number: 2 (lower is better)
Translates to: SPSSQCSFQGQGGLS*LEAPAPQPSLRHVL
Trigger: CAAAACATGCCGCAGGGAGGGCTGTGGTGCCGGTGCTTCCAACAAGGACAGCCCTCCTTGACCCTGAAAGGAACACTGGCTTGAAGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR-3UTR GCA 90 bp CTCACCCATCAGCTGCTGCAAACTTGCCTGATCAGTCGTGAACCCCACTTGAGGTCCTTCCACTCCTCCTaGTGCCCCTTCCAGCAGAGG +
Preference number: 2 (lower is better)
Translates to: LTHQLLQTCLISREPHLRSFHSS*CPFQQR
Trigger: CCTCTGCTGGAAGGGGCAGCAGGAGGAGTGGAAGGA...CCTCAAGTGGGGTTCACGACTGATCAGGCAAGTTTGCAGCAGCTGATGGGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR-3UTR TCA 90 bp GGGTCCGGTTTGCCAATGGGGAGAGTTCCCTTAAGCCGAGCTAGCCCTACAGGTAGATGTGCACGCTGCTaGTCTCCTGTCCAATCCAAG +
Preference number: 2 (lower is better)
Translates to: GSGLPMGRVPLSRASPTGRCARC*SPVQSK
Trigger: CTTGGATTGGACAGGAGATCAGCAGCGTGCACATCT...ACCTGTAGGGCTAGCTCGGCTTAAGGGAACTCTCCCCATTGGCAAACCGGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR CAA 90 bp TCCTTGTTGGAAGCACCGGCACCACAGCCCTCCCTGCGGCATGTTTaGGTGTCAGACCACTCAGCCCTTCTTAGATCCACCAGTGACATT +
Preference number: 2 (lower is better)
Translates to: SLLEAPAPQPSLRHV*VSDHSALLRSTSDI
Trigger: AATGTCACTGGTGGATCTAAGAAGGGCTGAGTGGTCTGACACCAAAACATGCCGCAGGGAGGGCTGTGGTGCCGGTGCTTCCAACAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR-3UTR TCA 90 bp AAGGATAAGCCAGTGACACAAGGCCAGGACCCATCTCCGCCAGAATACAGAACAGGCGTACGAACGGTGTaGGTGACTCTGCAGAGTCGC +
Preference number: 2 (lower is better)
Translates to: KDKPVTQGQDPSPPEYRTGVRTV*VTLQSR
Trigger: GCGACTCTGCAGAGTCACTCACACCGTTCGTACGCC...TGTTCTGTATTCTGGCGGAGATGGGTCCTGGCCTTGTGTCACTGGCTTATCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR-3UTR GCA 90 bp CTCACCCATCAGCTGCTGCAAACTTGCCTGATCAGTCGTGAACCCCACTTGAGGGCGTCTGACCCCCACTaGTGGGAACATAACCACACT +
Preference number: 2 (lower is better)
Translates to: LTHQLLQTCLISREPHLRASDPH*WEHNHT
Trigger: AGTGTGGTTATGTTCCCAGCAGTGGGGGTCAGACGC...CCTCAAGTGGGGTTCACGACTGATCAGGCAAGTTTGCAGCAGCTGATGGGTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR-3UTR CCA 90 bp ACAGGCAGGTCAGAGGAGAACGTATTCCAAGAAATAGAAGCACAGGATGCCAAGAGTCAGTGCCCTGTGTaGGGAACCCCGGGGACTCCG +
Preference number: 2 (lower is better)
Translates to: TGRSEENVFQEIEAQDAKSQCPV*GTPGTP
Trigger: CGGAGTCCCCGGGGTTCCCCACACAGGGCACTGACT...CTTGGCATCCTGTGCTTCTATTTCTTGGAATACGTTCTCCTCTGACCTGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR-3UTR CCA 90 bp CACACACCACACTCTTTGGCTCCCCGAGGGAAGAAGGCTACTGCTAAAAGGAATGTTGCTGCACACAGATaGCGCTGGGGAGGATGGGAG +
Preference number: 2 (lower is better)
Translates to: HTPHSLAPRGKKATAKRNVAAHR*RWGGWE
Trigger: CTCCCATCCTCCCCAGCGCCATCTGTGTGCAGCAAC...ATTCCTTTTAGCAGTAGCCTTCTTCCCTCGGGGAGCCAAAGAGTGTGGTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR-3UTR CCA 90 bp CCAGGGAAGCCCACGATGCGGTCCCGAGCTTCTCTCCACACCCGGAACCCAAACCATCAATGGACAGGATaGCCTCTGTCTCAATTTCAT +
Preference number: 2 (lower is better)
Translates to: PGKPTMRSRASLHTRNPNHQWTG*PLSQFH
Trigger: ATGAAATTGAGACAGAGGCCATCCTGTCCATTGATG...GTTTGGGTTCCGGGTGTGGAGAGAAGCTCGGGACCGCATCGTGGGCTTCCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522698.1
3UTR-3UTR TCA 90 bp TCCCACAGCCAAGCACAAGATCTAGGCCTGTGGGCACCAACAGGATGGGGCTCTCTTCAAAACAGTACTTaGAGAGGACCCACGTGGTAC +
Preference number: 2 (lower is better)
Translates to: SHSQAQDLGLWAPTGWGSLQNST*RGPTWY
Trigger: GTACCACGTGGGTCCTCTTCAAGTACTGTTTTGAAG...AGAGCCCCATCCTGTTGGTGCCCACAGGCCTAGATCTTGTGCTTGGCTGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR-3UTR GCA 90 bp ACAGAAAGGGTAAGGAAGAGACCTTGTCCAGGCCCGCAAGAGGGCCAAGTTCATCAGAACAAAGGAGCCTaGGCGGTCCCTCCCTTAGAA +
Preference number: 2 (lower is better)
Translates to: TERVRKRPCPGPQEGQVHQNKGA*AVPPLE
Trigger: TTCTAAGGGAGGGACCGCGCAGGCTCCTTTGTTCTG...ATGAACTTGGCCCTCTTGCGGGCCTGGACAAGGTCTCTTCCTTACCCTTTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR-3UTR CCA 90 bp CACACACCACACTCTTTGGCTCCCCGAGGGAAGAAGGCTACTGCTAAAAGGAATACGAACCAGCTGTCCTaGGCGTACGAACGGTGTGAG +
Preference number: 2 (lower is better)
Translates to: HTPHSLAPRGKKATAKRNTNQLS*AYERCE
Trigger: CTCACACCGTTCGTACGCCCAGGACAGCTGGTTCGT...ATTCCTTTTAGCAGTAGCCTTCTTCCCTCGGGGAGCCAAAGAGTGTGGTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR-3UTR CCA 90 bp GACCGTAAGTCCAAGACACAACTCGACAGGTATAGACTCAAAGCAGACATCATAGCCCACACCAGGGCCTaGTCAGGCTGCCTCCCATCG +
Preference number: 2 (lower is better)
Translates to: DRKSKTQLDRYRLKADIIAHTRA*SGCLPS
Trigger: CGATGGGAGGCAGCCTGACCAGGCCCTGGTGTGGGC...TATGATGTCTGCTTTGAGTCTATACCTGTCGAGTTGTGTCTTGGACTTACGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR CAA 90 bp AGTTACAGGTTGCTGACTGGCAACAGAAAGGGTAAGGAAGAGACCTaGTCCAGGCCCGCAAGAGGGCCAAGTTCATCCCTTTCTGGTTGC +
Preference number: 2 (lower is better)
Translates to: SYRLLTGNRKGKEET*SRPARGPSSSLSGC
Trigger: GCAACCAGAAAGGGATGAACTTGGCCCTCTTGCGGGCCTGGACAAGGTCTCTTCCTTACCCTTTCTGTTGCCAGTCAGCAACCTGTAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR CAA 90 bp CAGGCGCTCCCAGGGATTCACTGGGAAGAGAATGTGAGTTACAGGTaGCTGACTGGCAACAGAAAGGGTAAGGAAGAGACCTTGTCCAGG +
Preference number: 2 (lower is better)
Translates to: QALPGIHWEENVSYR*LTGNRKGKEETLSR
Trigger: CCTGGACAAGGTCTCTTCCTTACCCTTTCTGTTGCCAGTCAGCAACCTGTAACTCACATTCTCTTCCCAGTGAATCCCTGGGAGCGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR-3UTR TCA 90 bp CACACACCACACTCTTTGGCTCCCCGAGGGAAGAAGGCTACTGCTAAAAGGAATCTAGGGAGAGGAGGCTaGCCTGCAAACCACTTCAGA +
Preference number: 2 (lower is better)
Translates to: HTPHSLAPRGKKATAKRNLGRGG*PANHFR
Trigger: TCTGAAGTGGTTTGCAGGTCAGCCTCCTCTCCCTAG...ATTCCTTTTAGCAGTAGCCTTCTTCCCTCGGGGAGCCAAAGAGTGTGGTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR-3UTR GCA 90 bp CTCACCCATCAGCTGCTGCAAACTTGCCTGATCAGTCGTGAACCCCACTTGAGGAACTCGGGTTGTGAATaGCCGTTAGATTCCAAGGCT +
Preference number: 2 (lower is better)
Translates to: LTHQLLQTCLISREPHLRNSGCE*PLDSKA
Trigger: AGCCTTGGAATCTAACGGGCATTCACAACCCGAGTT...CCTCAAGTGGGGTTCACGACTGATCAGGCAAGTTTGCAGCAGCTGATGGGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR-3UTR CCA 90 bp ATTCACAGTGAGGCCTCACCTGTCCTGGGATCGCAGGCACACACAGCTCCCCACTCAAGAAACACGTCATaGGCTAAATCCCTGACAAAT +
Preference number: 2 (lower is better)
Translates to: IHSEASPVLGSQAHTAPHSRNTS*AKSLTN
Trigger: ATTTGTCAGGGATTTAGCCCATGACGTGTTTCTTGA...GTGGGGAGCTGTGTGTGCCTGCGATCCCAGGACAGGTGAGGCCTCACTGTGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR-3UTR TCA 90 bp ACAGGCAGGTCAGAGGAGAACGTATTCCAAGAAATAGAAGCACAGGATGCCAAGTACGAACGGTGTGAGTaGCTCTGCAGAGTCGCCACA +
Preference number: 2 (lower is better)
Translates to: TGRSEENVFQEIEAQDAKYERCE*LCRVAT
Trigger: TGTGGCGACTCTGCAGAGTCACTCACACCGTTCGTA...CTTGGCATCCTGTGCTTCTATTTCTTGGAATACGTTCTCCTCTGACCTGCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR-3UTR TCA 90 bp CACACACCACACTCTTTGGCTCCCCGAGGGAAGAAGGCTACTGCTAAAAGGAATTTAAGGATAAGCCAGTaGCACAAGGCCAGGACCCAT +
Preference number: 2 (lower is better)
Translates to: HTPHSLAPRGKKATAKRNLRISQ*HKARTH
Trigger: ATGGGTCCTGGCCTTGTGTCACTGGCTTATCCTTAA...ATTCCTTTTAGCAGTAGCCTTCTTCCCTCGGGGAGCCAAAGAGTGTGGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR-3UTR CCA 90 bp GACCGTAAGTCCAAGACACAACTCGACAGGTATAGACTCAAAGCAGACATCATATTCCAGCAGAGGCTCTaGGCCACCCACCAGCAGATG +
Preference number: 2 (lower is better)
Translates to: DRKSKTQLDRYRLKADIIFQQRL*ATHQQM
Trigger: CATCTGCTGGTGGGTGGCCCAGAGCCTCTGCTGGAA...TATGATGTCTGCTTTGAGTCTATACCTGTCGAGTTGTGTCTTGGACTTACGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR-3UTR CCA 90 bp CACACACCACACTCTTTGGCTCCCCGAGGGAAGAAGGCTACTGCTAAAAGGAATATCCTAAGCAGGGAGTaGAAAGTGGTAACTCGGGTT +
Preference number: 2 (lower is better)
Translates to: HTPHSLAPRGKKATAKRNILSRE*KVVTRV
Trigger: AACCCGAGTTACCACTTTCCACTCCCTGCTTAGGAT...ATTCCTTTTAGCAGTAGCCTTCTTCCCTCGGGGAGCCAAAGAGTGTGGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR-3UTR TCA 90 bp AAATTAACTTTGCATATATGGGCCACATGCCCTTCCACATCCTGCTTAAAGCACGTGGTGAGAAGCACCTaGCCAGTGACACTGTGGCCA +
Preference number: 2 (lower is better)
Translates to: KLTLHIWATCPSTSCLKHVVRST*PVTLWP
Trigger: TGGCCACAGTGTCACTGGTCAGGTGCTTCTCACCAC...GTGCTTTAAGCAGGATGTGGAAGGGCATGTGGCCCATATATGCAAAGTTAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR-3UTR CCA 90 bp ACTGGCTTAAGGCATGTGCATGACCAGGACAAACCTGAGCTTTTGTTCAGTTGCTGGCGCTGGGGAGGATaGGAGATGATCTTTAAGGAT +
Preference number: 2 (lower is better)
Translates to: TGLRHVHDQDKPELLFSCWRWGG*EMIFKD
Trigger: ATCCTTAAAGATCATCTCCCATCCTCCCCAGCGCCA...GCAACTGAACAAAAGCTCAGGTTTGTCCTGGTCATGCACATGCCTTAAGCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR-3UTR CCA 90 bp GACCGTAAGTCCAAGACACAACTCGACAGGTATAGACTCAAAGCAGACATCATAATAGAAAGAGCCATCTaGGAGTGGCGTCTTCAGCCC +
Preference number: 2 (lower is better)
Translates to: DRKSKTQLDRYRLKADIIIERAI*EWRLQP
Trigger: GGGCTGAAGACGCCACTCCCAGATGGCTCTTTCTAT...TATGATGTCTGCTTTGAGTCTATACCTGTCGAGTTGTGTCTTGGACTTACGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR-3UTR CCA 90 bp AAATTAACTTTGCATATATGGGCCACATGCCCTTCCACATCCTGCTTAAAGCACACAGATAACACAGGATaGGGCTCCAGACAGAGGCGG +
Preference number: 2 (lower is better)
Translates to: KLTLHIWATCPSTSCLKHTDNTG*GSRQRR
Trigger: CCGCCTCTGTCTGGAGCCCCATCCTGTGTTATCTGT...GTGCTTTAAGCAGGATGTGGAAGGGCATGTGGCCCATATATGCAAAGTTAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR-3UTR CCA 90 bp AAATTAACTTTGCATATATGGGCCACATGCCCTTCCACATCCTGCTTAAAGCACAGCCCTACAGGTGGGTaGGAGCTACACAAAAGAGCC +
Preference number: 2 (lower is better)
Translates to: KLTLHIWATCPSTSCLKHSPTGG*ELHKRA
Trigger: GGCTCTTTTGTGTAGCTCCCACCCACCTGTAGGGCT...GTGCTTTAAGCAGGATGTGGAAGGGCATGTGGCCCATATATGCAAAGTTAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR-3UTR CCA 90 bp GACCGTAAGTCCAAGACACAACTCGACAGGTATAGACTCAAAGCAGACATCATAAAGGGGTGGGGTGGATaGACGTGGCATGGATATCAA +
Preference number: 2 (lower is better)
Translates to: DRKSKTQLDRYRLKADIIKGWGG*TWHGYQ
Trigger: TTGATATCCATGCCACGTCCATCCACCCCACCCCTT...TATGATGTCTGCTTTGAGTCTATACCTGTCGAGTTGTGTCTTGGACTTACGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR-3UTR GCA 90 bp GACCGTAAGTCCAAGACACAACTCGACAGGTATAGACTCAAAGCAGACATCATAAAGCAATCAAGCAGGTaGCTTCTCTCAGGTCACTCT +
Preference number: 2 (lower is better)
Translates to: DRKSKTQLDRYRLKADIIKQSSR*LLSGHS
Trigger: AGAGTGACCTGAGAGAAGGCACCTGCTTGATTGCTT...TATGATGTCTGCTTTGAGTCTATACCTGTCGAGTTGTGTCTTGGACTTACGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR-3UTR CCA 90 bp ACAGGCAGGTCAGAGGAGAACGTATTCCAAGAAATAGAAGCACAGGATGCCAAGCAAACAAGAGAGAAATaGGAGAGCAGGGATAAGTAC +
Preference number: 2 (lower is better)
Translates to: TGRSEENVFQEIEAQDAKQTREK*ESRDKY
Trigger: GTACTTATCCCTGCTCTCCCATTTCTCTCTTGTTTG...CTTGGCATCCTGTGCTTCTATTTCTTGGAATACGTTCTCCTCTGACCTGCCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR-3UTR CCA 90 bp ACCAGGACAAACCTGAGCTTTTGTTCAGTTGCTAGAAAACTTCCAGAGTCAACTCTCCCAGGGATTCACTaGGAAGAGAATGTGAGTTAC +
Preference number: 2 (lower is better)
Translates to: TRTNLSFCSVARKLPESTLPGIH*EENVSY
Trigger: GTAACTCACATTCTCTTCCCAGTGAATCCCTGGGAG...AGTTGACTCTGGAAGTTTTCTAGCAACTGAACAAAAGCTCAGGTTTGTCCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR-3UTR CCA 90 bp ACCAGGACAAACCTGAGCTTTTGTTCAGTTGCTAGAAAACTTCCAGAGTCAACTGTACGGAGGCAAGCCTaGCCTAAAGATAAATCCTCA +
Preference number: 2 (lower is better)
Translates to: TRTNLSFCSVARKLPESTVRRQA*PKDKSS
Trigger: TGAGGATTTATCTTTAGGCCAGGCTTGCCTCCGTAC...AGTTGACTCTGGAAGTTTTCTAGCAACTGAACAAAAGCTCAGGTTTGTCCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR GCA 72 bp AGCAGCAAGCCGGCCACCCAGAGAACGAGGCGCTCCTaGACCCTGCGAGCCAGGACAAGGTGGCCAGGGGCG +
Preference number: 3 (lower is better)
Translates to: SSKPATQRTRRS*TLRARTRWPGA
Trigger: CGCCCCTGGCCACCTTGTCCTGGCTCGCAGGGTGCAGGAGCGCCTCGTTCTCTGGGTGGCCGGCTTGCTGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR CCA 72 bp CCCATCCTTCCGGACAGGACCCCAGCTGGTGAGCCCTaGCCTGAGGCACAGTCCACACGGAGGAGCACTGCC +
Preference number: 3 (lower is better)
Translates to: PILPDRTPAGEP*PEAQSTRRSTA
Trigger: GGCAGTGCTCCTCCGTGTGGACTGTGCCTCAGGCCAGGGCTCACCAGCTGGGGTCCTGTCCGGAAGGATGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR CCA 72 bp GGCGGCCCACAGACAGCCAAGGAGACCCGGGGTCTGTaGCGCCGCTTTCCCATCTCAAGCGAGTCACAGGTC +
Preference number: 3 (lower is better)
Translates to: GGPQTAKETRGL*RRFPISSESQV
Trigger: GACCTGTGACTCGCTTGAGATGGGAAAGCGGCGCCACAGACCCCGGGTCTCCTTGGCTGTCTGTGGGCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR GCA 72 bp CTGTGGCCACCTTGCTGCCTCTCGCTGAGGAGGGCGTaGCCCTCAGAGCCTGTCTGCAGTCCTTCAAGCCAG +
Preference number: 3 (lower is better)
Translates to: LWPPCCLSLRRA*PSEPVCSPSSQ
Trigger: CTGGCTTGAAGGACTGCAGACAGGCTCTGAGGGGCACGCCCTCCTCAGCGAGAGGCAGCAAGGTGGCCACAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR GCA 72 bp TGTCCCATGCGTGGTAACGGCCAGGGAAGCCCACGATaGGGTCCCGAGCTTCTCTCCACACCCGGAACCCAA +
Preference number: 3 (lower is better)
Translates to: CPMRGNGQGSPR*GPELLSTPGTQ
Trigger: TTGGGTTCCGGGTGTGGAGAGAAGCTCGGGACCGCATCGTGGGCTTCCCTGGCCGTTACCACGCATGGGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522698.1
3UTR CCA 72 bp CCAGGGAGCCAGCGCTCACAGTGGCCTGCAGAGCCCTaGGACGGTGTTATGGTAAGACAGCCCAAACCGGAG +
Preference number: 3 (lower is better)
Translates to: PGSQRSQWPAEP*DGVMVRQPKPE
Trigger: CTCCGGTTTGGGCTGTCTTACCATAACACCGTCCCAGGGCTCTGCAGGCCACTGTGAGCGCTGGCTCCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR GCA 72 bp AGATCTAGGCCTGTGGGCACCAACAGGATGGGGCTCTaGAGTCAGGGAGCGTCAGCTCGGTGCAGGTACAGG +
Preference number: 3 (lower is better)
Translates to: RSRPVGTNRMGL*SQGASARCRYR
Trigger: CCTGTACCTGCACCGAGCTGACGCTCCCTGACTGCAGAGCCCCATCCTGTTGGTGCCCACAGGCCTAGATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR GCA 72 bp GGAGTTGTAGAGCCAGGACTGATGGGGGATGTCCCATaGGTGGTAACGGCCAGGGAAGCCCACGATGCGGTC +
Preference number: 3 (lower is better)
Translates to: GVVEPGLMGDVP*VVTAREAHDAV
Trigger: GACCGCATCGTGGGCTTCCCTGGCCGTTACCACGCATGGGACATCCCCCATCAGTCCTGGCTCTACAACTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522698.1
3UTR CCA 72 bp GTCCAGGCCCGCAAGAGGGCCAAGTTCATCCCTTTCTaGTTGCTGCACACAGATGGCGCTGGGGAGGATGGG +
Preference number: 3 (lower is better)
Translates to: VQARKRAKFIPF*LLHTDGAGEDG
Trigger: CCCATCCTCCCCAGCGCCATCTGTGTGCAGCAACCAGAAAGGGATGAACTTGGCCCTCTTGCGGGCCTGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR GCA 72 bp GGCCACCCACCAGCAGATGTGCCCAAGGTCCTGCAATaGCTAGGAACCTTGGGAGCCATCTTCCTCCCTCTG +
Preference number: 3 (lower is better)
Translates to: GHPPADVPKVLQ*LGTLGAIFLPL
Trigger: CAGAGGGAGGAAGATGGCTCCCAAGGTTCCTAGGCATTGCAGGACCTTGGGCACATCTGCTGGTGGGTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR CCA 72 bp AGTGTTCCTTTCAGGGTCAAGGAGGGCTGTCCTTGTTaGAAGCACCGGCACCACAGCCCTCCCTGCGGCATG +
Preference number: 3 (lower is better)
Translates to: SVPFRVKEGCPC*KHRHHSPPCGM
Trigger: CATGCCGCAGGGAGGGCTGTGGTGCCGGTGCTTCCAACAAGGACAGCCCTCCTTGACCCTGAAAGGAACACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR CCA 72 bp GGCTGCCTCCCATCGTCTTCTGCGAGCAGGCCCAGCTaGCATACACAGGTGGCGACCTGGAATCAAGCAATC +
Preference number: 3 (lower is better)
Translates to: GCLPSSSASRPS*HTQVATWNQAI
Trigger: GATTGCTTGATTCCAGGTCGCCACCTGTGTATGCCAGCTGGGCCTGCTCGCAGAAGACGATGGGAGGCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR CCA 72 bp GGAACTCCTGTGTTCTTGAGAGGCTGCAGTCCGGTGTaGGAGGCAGAGCAGTGGCCAGCACACAGCATGGTG +
Preference number: 3 (lower is better)
Translates to: GTPVFLRGCSPV*EAEQWPAHSMV
Trigger: CACCATGCTGTGTGCTGGCCACTGCTCTGCCTCCCACACCGGACTGCAGCCTCTCAAGAACACAGGAGTTCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR TCA 72 bp GGGCATGACCTATGGACCGAATCGAGCCATTCACAGTaGGGCCTCACCTGTCCTGGGATCGCAGGCACACAC +
Preference number: 3 (lower is better)
Translates to: GHDLWTESSHSQ*GLTCPGIAGTH
Trigger: GTGTGTGCCTGCGATCCCAGGACAGGTGAGGCCTCACTGTGAATGGCTCGATTCGGTCCATAGGTCATGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR GCA 72 bp AGGCCCGCAAGAGGGCCAAGTTCATCCCTTTCTGGTTaGTGCACACAGATGGCGCTGGGGAGGATGGGAGAT +
Preference number: 3 (lower is better)
Translates to: RPARGPSSSLSG*CTQMALGRMGD
Trigger: ATCTCCCATCCTCCCCAGCGCCATCTGTGTGCAGCAACCAGAAAGGGATGAACTTGGCCCTCTTGCGGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR GCA 72 bp TGTCCTTGTTGGAAGCACCGGCACCACAGCCCTCCCTaGGGCATGTTTTGGTGTCAGACCACTCAGCCCTTC +
Preference number: 3 (lower is better)
Translates to: CPCWKHRHHSPP*GMFWCQTTQPF
Trigger: GAAGGGCTGAGTGGTCTGACACCAAAACATGCCGCAGGGAGGGCTGTGGTGCCGGTGCTTCCAACAAGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR CCA 72 bp CAGGCGCCTTGCTGTAAAACTTCCCGGCCAGCCGGGTaGGTTCCTCGAAGGACACTGGCTTGCTCTACACTA +
Preference number: 3 (lower is better)
Translates to: QAPCCKTSRPAG*VPRRTLACSTL
Trigger: TAGTGTAGAGCAAGCCAGTGTCCTTCGAGGAACCCACCCGGCTGGCCGGGAAGTTTTACAGCAAGGCGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR CCA 72 bp CGAATCGAGCCATTCACAGTGAGGCCTCACCTGTCCTaGGATCGCAGGCACACACAGCTCCCCACAACCACT +
Preference number: 3 (lower is better)
Translates to: RIEPFTVRPHLS*DRRHTQLPTTT
Trigger: AGTGGTTGTGGGGAGCTGTGTGTGCCTGCGATCCCAGGACAGGTGAGGCCTCACTGTGAATGGCTCGATTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR-3UTR CAA 90 bp TCCCAGAAAGATCCCATCCTTCCGGACAGGACCCCAGCTGGTGAGCCCTGGCCTTTCATCCCTTTCTGGTaGCTGCACACAGATGGCGCT +
Preference number: 3 (lower is better)
Translates to: SQKDPILPDRTPAGEPWPFIPFW*LHTDGA
Trigger: AGCGCCATCTGTGTGCAGCAACCAGAAAGGGATGAA...AGGCCAGGGCTCACCAGCTGGGGTCCTGTCCGGAAGGATGGGATCTTTCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR TCA 72 bp ACGAACCAGCTGTCCTGGGCGTACGAACGGTGTGAGTaGCTCTGCAGAGTCGCCACAGTCCTCAGTGTAAGC +
Preference number: 3 (lower is better)
Translates to: TNQLSWAYERCE*LCRVATVLSVS
Trigger: GCTTACACTGAGGACTGTGGCGACTCTGCAGAGTCACTCACACCGTTCGTACGCCCAGGACAGCTGGTTCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR TCA 72 bp AACCACGAACCAGCTGTCCTGGGCGTACGAACGGTGTaGGTGACTCTGCAGAGTCGCCACAGTCCTCAGTGT +
Preference number: 3 (lower is better)
Translates to: NHEPAVLGVRTV*VTLQSRHSPQC
Trigger: ACACTGAGGACTGTGGCGACTCTGCAGAGTCACTCACACCGTTCGTACGCCCAGGACAGCTGGTTCGTGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR CCA 72 bp ACAGCCCACCAGGGTCAGGCGCTCCCAGGGATTCACTaGGAAGAGAATGTGAGTTACAGGTTGCTGACTGGC +
Preference number: 3 (lower is better)
Translates to: TAHQGQALPGIH*EENVSYRLLTG
Trigger: GCCAGTCAGCAACCTGTAACTCACATTCTCTTCCCAGTGAATCCCTGGGAGCGCCTGACCCTGGTGGGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR CCA 72 bp CGTCTTCTGCGAGCAGGCCCAGCTGGCATACACAGGTaGCGACCTGGAATCAAGCAATCAAGCAGGTGCCTT +
Preference number: 3 (lower is better)
Translates to: RLLRAGPAGIHR*RPGIKQSSRCL
Trigger: AAGGCACCTGCTTGATTGCTTGATTCCAGGTCGCCACCTGTGTATGCCAGCTGGGCCTGCTCGCAGAAGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR-3UTR CAA 90 bp GCTCACCGAGTCCCACTGAAGTCAGTATGTGAGTTCCTCACATTAAAAGAAACCGCGGCCGGGTCCGGTTaGCCAATGGGGAGAGTTCCC +
Preference number: 3 (lower is better)
Translates to: AHRVPLKSVCEFLTLKETAAGSG*PMGRVP
Trigger: GGGAACTCTCCCCATTGGCAAACCGGACCCGGCCGC...GGTTTCTTTTAATGTGAGGAACTCACATACTGACTTCAGTGGGACTCGGTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR TCA 72 bp GGTCCCGAGCTTCTCTCCACACCCGGAACCCAAACATaGTTTCGTCATGGCGGAGGTGAGCATCGTCATCAA +
Preference number: 3 (lower is better)
Translates to: GPELLSTPGTQT*FRHGGGEHRHQ
Trigger: TTGATGACGATGCTCACCTCCGCCATGACGAAATCATGTTTGGGTTCCGGGTGTGGAGAGAAGCTCGGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522698.1
3UTR GCA 72 bp GGACCCATCTCCGCCAGAATACAGAACAAAGGAGCCTaGGCGGTCCCTCCCTTAGAAAGGCAAAACTCACAC +
Preference number: 3 (lower is better)
Translates to: GPISARIQNKGA*AVPPLERQNSH
Trigger: GTGTGAGTTTTGCCTTTCTAAGGGAGGGACCGCGCAGGCTCCTTTGTTCTGTATTCTGGCGGAGATGGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR GCA 72 bp ACTGGCTTGCTCTACACTAGGGAGAGGAGGCTGACCTaGAAACCACTTCAGACCACAGCAGATGTGCACGCT +
Preference number: 3 (lower is better)
Translates to: TGLLYTRERRLT*KPLQTTADVHA
Trigger: AGCGTGCACATCTGCTGTGGTCTGAAGTGGTTTGCAGGTCAGCCTCCTCTCCCTAGTGTAGAGCAAGCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR TCA 72 bp GGTACAGGTGCCTTAGTGACCTATAGGTCAGGGGCATaGCCTATGGACCGAATCGAGCCATTCACAGTGAGG +
Preference number: 3 (lower is better)
Translates to: GTGALVTYRSGA*PMDRIEPFTVR
Trigger: CCTCACTGTGAATGGCTCGATTCGGTCCATAGGTCATGCCCCTGACCTATAGGTCACTAAGGCACCTGTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR TCA 72 bp CACCCATCAGCTGCTGCAAACTTGCCTGATCAGTCGTaGACCCCACTTGAGGAGGGACACCGACTGTTAAGT +
Preference number: 3 (lower is better)
Translates to: HPSAAANLPDQS*TPLEEGHRLLS
Trigger: ACTTAACAGTCGGTGTCCCTCCTCAAGTGGGGTTCACGACTGATCAGGCAAGTTTGCAGCAGCTGATGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR TCA 72 bp GCCAAAACTCCAGACCCAAAGAGGAATGCCCCTCGATaGCATCTCACCCATCAGCTGCTGCAAACTTGCCTG +
Preference number: 3 (lower is better)
Translates to: AKTPDPKRNAPR*HLTHQLLQTCL
Trigger: CAGGCAAGTTTGCAGCAGCTGATGGGTGAGATGTCATCGAGGGGCATTCCTCTTTGGGTCTGGAGTTTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR TCA 72 bp ACCCGGAACCCAAACATGATTTCGTCATGGCGGAGGTaGGCATCGTCATCAATGGACAGGATGGCCTCTGTC +
Preference number: 3 (lower is better)
Translates to: TRNPNMISSWRR*ASSSMDRMASV
Trigger: GACAGAGGCCATCCTGTCCATTGATGACGATGCTCACCTCCGCCATGACGAAATCATGTTTGGGTTCCGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522698.1
3UTR GCA 72 bp GAGCTTGACAGCCAAAACTCCAGACCCAAAGAGGAATaGCCCTCGATGACATCTCACCCATCAGCTGCTGCA +
Preference number: 3 (lower is better)
Translates to: ELDSQNSRPKEE*PSMTSHPSAAA
Trigger: TGCAGCAGCTGATGGGTGAGATGTCATCGAGGGGCATTCCTCTTTGGGTCTGGAGTTTTGGCTGTCAAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR-3UTR CAA 90 bp CTCACCCATCAGCTGCTGCAAACTTGCCTGATCAGTCGTGAACCCCACTTGAGGTTTTGTCAAAATGACTaGCCCTGGAACCGGGCACAG +
Preference number: 3 (lower is better)
Translates to: LTHQLLQTCLISREPHLRFCQND*PWNRAQ
Trigger: CTGTGCCCGGTTCCAGGGCAAGTCATTTTGACAAAA...CCTCAAGTGGGGTTCACGACTGATCAGGCAAGTTTGCAGCAGCTGATGGGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR TCA 72 bp ACTGTTAAGTCTCACCCATTCTTAGGACTGTCAGTGTaGCCAAAGCTGCCACCTGCAGAGCCCAGGAGAGGA +
Preference number: 3 (lower is better)
Translates to: TVKSHPFLGLSV*PKLPPAEPRRG
Trigger: TCCTCTCCTGGGCTCTGCAGGTGGCAGCTTTGGTCACACTGACAGTCCTAAGAATGGGTGAGACTTAACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR CCA 72 bp GGCCAAGTTCATCCCTTTCTGGTTGCTGCACACAGATaGCGCTGGGGAGGATGGGAGATGATCTTTAAGGAT +
Preference number: 3 (lower is better)
Translates to: GQVHPFLVAAHR*RWGGWEMIFKD
Trigger: ATCCTTAAAGATCATCTCCCATCCTCCCCAGCGCCATCTGTGTGCAGCAACCAGAAAGGGATGAACTTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR CCA 72 bp AGAGTTCCCTTAAGCCGAGCTAGCCCTACAGGTGGGTaGGAGCTACACAAAAGAGCCCAGCTTCAAAACAGT +
Preference number: 3 (lower is better)
Translates to: RVPLSRASPTGG*ELHKRAQLQNS
Trigger: ACTGTTTTGAAGCTGGGCTCTTTTGTGTAGCTCCCACCCACCTGTAGGGCTAGCTCGGCTTAAGGGAACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR CCA 72 bp GTTCATCCCTTTCTGGTTGCTGCACACAGATGGCGCTaGGGAGGATGGGAGATGATCTTTAAGGATAAGCCA +
Preference number: 3 (lower is better)
Translates to: VHPFLVAAHRWR*GGWEMIFKDKP
Trigger: TGGCTTATCCTTAAAGATCATCTCCCATCCTCCCCAGCGCCATCTGTGTGCAGCAACCAGAAAGGGATGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR-3UTR CAA 90 bp GCTCACCGAGTCCCACTGAAGTCAGTATGTGAGTTCCTCACATTAAAAGAAACCCAATGCCTAGGAACCTaGGGAGCCATCTTCCTCCCT +
Preference number: 3 (lower is better)
Translates to: AHRVPLKSVCEFLTLKETQCLGT*GAIFLP
Trigger: AGGGAGGAAGATGGCTCCCAAGGTTCCTAGGCATTG...GGTTTCTTTTAATGTGAGGAACTCACATACTGACTTCAGTGGGACTCGGTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR TCA 72 bp CAAACCACTTCAGACCACAGCAGATGTGCACGCTGCTaGTCTCCTGTCCAATCCAAGAAAGAGCACTTCAGA +
Preference number: 3 (lower is better)
Translates to: QTTSDHSRCARC*SPVQSKKEHFR
Trigger: TCTGAAGTGCTCTTTCTTGGATTGGACAGGAGATCAGCAGCGTGCACATCTGCTGTGGTCTGAAGTGGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR GCA 72 bp AAGCAGGGAGTGGAAAGTGGTAACTCGGGTTGTGAATaGCCGTTAGATTCCAAGGCTGGATGTGAGCTTACA +
Preference number: 3 (lower is better)
Translates to: KQGVESGNSGCE*PLDSKAGCELT
Trigger: TGTAAGCTCACATCCAGCCTTGGAATCTAACGGGCATTCACAACCCGAGTTACCACTTTCCACTCCCTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR CCA 72 bp TTTCTGGTTGCTGCACACAGATGGCGCTGGGGAGGATaGGAGATGATCTTTAAGGATAAGCCAGTGACACAA +
Preference number: 3 (lower is better)
Translates to: FLVAAHRWRWGG*EMIFKDKPVTQ
Trigger: TTGTGTCACTGGCTTATCCTTAAAGATCATCTCCCATCCTCCCCAGCGCCATCTGTGTGCAGCAACCAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR CCA 72 bp CAACAGAAGAGCAGGATAGAAAGAGCCATCTGGGAGTaGCGTCTTCAGCCCCTATTCTTTCTCACTCTTTGC +
Preference number: 3 (lower is better)
Translates to: QQKSRIERAIWE*RLQPLFFLTLC
Trigger: GCAAAGAGTGAGAAAGAATAGGGGCTGAAGACGCCACTCCCAGATGGCTCTTTCTATCCTGCTCTTCTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR CCA 72 bp TTTTCTACAGCCTCATGCCACCTTCTCAAGTCTCTCTaGTCCCAGGACAATCGTAACATGGAGATGGATGGC +
Preference number: 3 (lower is better)
Translates to: FSTASCHLLKSL*SQDNRNMEMDG
Trigger: GCCATCCATCTCCATGTTACGATTGTCCTGGGACCAGAGAGACTTGAGAAGGTGGCATGAGGCTGTAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR CCA 72 bp CATGGCGGAGGTGAGCATCGTCATCAATGGACAGGATaGCCTCTGTCTCAATTTCATTCCAGGGTAAGAATC +
Preference number: 3 (lower is better)
Translates to: HGGGEHRHQWTG*PLSQFHSRVRI
Trigger: GATTCTTACCCTGGAATGAAATTGAGACAGAGGCCATCCTGTCCATTGATGACGATGCTCACCTCCGCCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522698.1
3UTR CCA 72 bp AATACTTGTGAAAGAAGGCAGCACCTGTCAGCACCATaGACAGCTCACAGGAGTAGTTGGAGTTGTAGAGCC +
Preference number: 3 (lower is better)
Translates to: NTCERRQHLSAP*TAHRSSWSCRA
Trigger: GGCTCTACAACTCCAACTACTCCTGTGAGCTGTCCATGGTGCTGACAGGTGCTGCCTTCTTTCACAAGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522698.1
3UTR-3UTR CAA 90 bp AAATTAACTTTGCATATATGGGCCACATGCCCTTCCACATCCTGCTTAAAGCACTCCCTGCGGCATGTTTaGGTGTCAGACCACTCAGCC +
Preference number: 3 (lower is better)
Translates to: KLTLHIWATCPSTSCLKHSLRHV*VSDHSA
Trigger: GGCTGAGTGGTCTGACACCAAAACATGCCGCAGGGA...GTGCTTTAAGCAGGATGTGGAAGGGCATGTGGCCCATATATGCAAAGTTAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR-3UTR CAA 90 bp ACTGGCTTAAGGCATGTGCATGACCAGGACAAACCTGAGCTTTTGTTCAGTTGCAATGTGAGTTACAGGTaGCTGACTGGCAACAGAAAG +
Preference number: 3 (lower is better)
Translates to: TGLRHVHDQDKPELLFSCNVSYR*LTGNRK
Trigger: CTTTCTGTTGCCAGTCAGCAACCTGTAACTCACATT...GCAACTGAACAAAAGCTCAGGTTTGTCCTGGTCATGCACATGCCTTAAGCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR TCA 72 bp CTGGCGCTCAAACCTAGCGGAAGGCAGAAAGAGCCATaGAGAAGTGGACACTATTTTACTCCAGTAATAGTT +
Preference number: 3 (lower is better)
Translates to: LALKPSGRQKEP*RSGHYFTPVIV
Trigger: AACTATTACTGGAGTAAAATAGTGTCCACTTCTTCATGGCTCTTTCTGCCTTCCGCTAGGTTTGAGCGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp AGGCGCTCCTGCACCCTGCGAGCCAGGACAAGGTGGCCAGGGGCGGCCCACAGACTGGGAGCAGTCGGATaGGCAGGGACAGCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: RRSCTLRARTRWPGAAHRLGAVG*AGTAWA
Trigger: AGCCCAAGCTGTCCCTGCCCATCCGACTGCTCCCAG...TCTGTGGGCCGCCCCTGGCCACCTTGTCCTGGCTCGCAGGGTGCAGGAGCGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp AGGCGCTCCTGCACCCTGCGAGCCAGGACAAGGTGGCCAGGGGCGGCCCACAGAGGCCTGAGGGCATCCTaGGCATCGGAATGTCCACCG +
Preference number: 4 (lower is better)
Translates to: RRSCTLRARTRWPGAAHRGLRAS*ASECPP
Trigger: CGGTGGACATTCCGATGCCCAGGATGCCCTCAGGCC...TCTGTGGGCCGCCCCTGGCCACCTTGTCCTGGCTCGCAGGGTGCAGGAGCGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp AGGCGCTCCTGCACCCTGCGAGCCAGGACAAGGTGGCCAGGGGCGGCCCACAGAGAGGGCTGTCCTTGTTaGAAGCACCGGCACCACAGC +
Preference number: 4 (lower is better)
Translates to: RRSCTLRARTRWPGAAHREGCPC*KHRHHS
Trigger: GCTGTGGTGCCGGTGCTTCCAACAAGGACAGCCCTC...TCTGTGGGCCGCCCCTGGCCACCTTGTCCTGGCTCGCAGGGTGCAGGAGCGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp AGGCGCTCCTGCACCCTGCGAGCCAGGACAAGGTGGCCAGGGGCGGCCCACAGACCGGGAAGCCAGAGGTaGGAGGGCAACGAGAATAAT +
Preference number: 4 (lower is better)
Translates to: RRSCTLRARTRWPGAAHRPGSQR*EGNENN
Trigger: ATTATTCTCGTTGCCCTCTCACCTCTGGCTTCCCGG...TCTGTGGGCCGCCCCTGGCCACCTTGTCCTGGCTCGCAGGGTGCAGGAGCGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp GCGGCCCACAGACAGCCAAGGAGACCCGGGGTCTGTGGCGCCGCTTTCCCATCTGGGGCAGGCGTGTCTTaGAGAGCACAGAATCCACCC +
Preference number: 4 (lower is better)
Translates to: AAHRQPRRPGVCGAAFPSGAGVS*RAQNPP
Trigger: GGGTGGATTCTGTGCTCTTCAAGACACGCCTGCCCC...AGATGGGAAAGCGGCGCCACAGACCCCGGGTCTCCTTGGCTGTCTGTGGGCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp GGGTCTGTGGCGCCGCTTTCCCATCTCAAGCGAGTCACAGGTCGGCGGCTTTCCACGGCCCCAGCTCACTaGGTCCCGCTAAAGGGGGTC +
Preference number: 4 (lower is better)
Translates to: GSVAPLSHLKRVTGRRLSTAPAH*VPLKGV
Trigger: GACCCCCTTTAGCGGGACTCAGTGAGCTGGGGCCGT...GGAAAGCCGCCGACCTGTGACTCGCTTGAGATGGGAAAGCGGCGCCACAGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp CCCAGAAAGATCCCATCCTTCCGGACAGGACCCCAGCTGGTGAGCCCTGGCCTGGCCTTGCCTGAACGGTaGGGGATCTCAGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: PRKIPSFRTGPQLVSPGLALPER*GISAAA
Trigger: GGCGGCAGCTGAGATCCCCCACCGTTCAGGCAAGGC...CAGGCCAGGGCTCACCAGCTGGGGTCCTGTCCGGAAGGATGGGATCTTTCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp CCCAGAAAGATCCCATCCTTCCGGACAGGACCCCAGCTGGTGAGCCCTGGCCTGGTGATCCACCCGCCTTaGCCTCCCCAGGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: PRKIPSFRTGPQLVSPGLVIHPP*PPQVLG
Trigger: TCCCAGCACCTGGGGAGGCCAAGGCGGGTGGATCAC...CAGGCCAGGGCTCACCAGCTGGGGTCCTGTCCGGAAGGATGGGATCTTTCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp GCGGCCCACAGACAGCCAAGGAGACCCGGGGTCTGTGGCGCCGCTTTCCCATCTGGCATGGACCAGCGGTaGTACGACCAAGTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: AAHRQPRRPGVCGAAFPSGMDQR*YDQVKA
Trigger: GGCTTTGACTTGGTCGTATCACCGCTGGTCCATGCC...AGATGGGAAAGCGGCGCCACAGACCCCGGGTCTCCTTGGCTGTCTGTGGGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp GCGGCCCACAGACAGCCAAGGAGACCCGGGGTCTGTGGCGCCGCTTTCCCATCTCAGTACGGACCACCATaGTGGGGACGCCAATGTCAG +
Preference number: 4 (lower is better)
Translates to: AAHRQPRRPGVCGAAFPSQYGPP*WGRQCQ
Trigger: CTGACATTGGCGTCCCCATCATGGTGGTCCGTACTG...AGATGGGAAAGCGGCGCCACAGACCCCGGGTCTCCTTGGCTGTCTGTGGGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp AGGCGCTCCTGCACCCTGCGAGCCAGGACAAGGTGGCCAGGGGCGGCCCACAGACCTTCACGAAGAAGTTaGTGCACTTGTGCCGCTCGT +
Preference number: 4 (lower is better)
Translates to: RRSCTLRARTRWPGAAHRPSRRS*CTCAAR
Trigger: ACGAGCGGCACAAGTGCATCAACTTCTTCGTGAAGG...TCTGTGGGCCGCCCCTGGCCACCTTGTCCTGGCTCGCAGGGTGCAGGAGCGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp ATTCACAGTGAGGCCTCACCTGTCCTGGGATCGCAGGCACACACAGCTCCCCACAGAAGCCGTTCTGGCTaGCGGCCGCCCGCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: IHSEASPVLGSQAHTAPHRSRSG*RPPAFQ
Trigger: CTGGAAGGCGGGCGGCCGGCAGCCAGAACGGCTTCT...GTGGGGAGCTGTGTGTGCCTGCGATCCCAGGACAGGTGAGGCCTCACTGTGAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp GGGGGATGTCCCATGCGTGGTAACGGCCAGGGAAGCCCACGATGCGGTCCCGAGATGGGGGATGTCCCATaGGTGGTAACGGCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: GGCPMRGNGQGSPRCGPEMGDVP*VVTARE
Trigger: TTCCCTGGCCGTTACCACGCATGGGACATCCCCCAT...CTCGGGACCGCATCGTGGGCTTCCCTGGCCGTTACCACGCATGGGACATCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000522698.1
CDS-3UTR CCA 90 bp GGGTCTGTGGCGCCGCTTTCCCATCTCAAGCGAGTCACAGGTCGGCGGCTTTCCCCGGATGGGAGCGGCTaGGATCTGGATGCGAGTCCT +
Preference number: 4 (lower is better)
Translates to: GSVAPLSHLKRVTGRRLSPDGSG*DLDASP
Trigger: AGGACTCGCATCCAGATCCCAGCCGCTCCCATCCGG...GGAAAGCCGCCGACCTGTGACTCGCTTGAGATGGGAAAGCGGCGCCACAGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp AGGCGCTCCTGCACCCTGCGAGCCAGGACAAGGTGGCCAGGGGCGGCCCACAGACACTTGGTCTTGTCATaGGGCAGGCGTGTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: RRSCTLRARTRWPGAAHRHLVLS*GRRVLK
Trigger: CTTCAAGACACGCCTGCCCCATGACAAGACCAAGTG...TCTGTGGGCCGCCCCTGGCCACCTTGTCCTGGCTCGCAGGGTGCAGGAGCGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp CCCAGAAAGATCCCATCCTTCCGGACAGGACCCCAGCTGGTGAGCCCTGGCCTGTTGGAAACACAGTCCTaGCGGCGGCCGGGTCCGGTT +
Preference number: 4 (lower is better)
Translates to: PRKIPSFRTGPQLVSPGLLETQS*RRPGPV
Trigger: AACCGGACCCGGCCGCCGCCAGGACTGTGTTTCCAA...CAGGCCAGGGCTCACCAGCTGGGGTCCTGTCCGGAAGGATGGGATCTTTCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp CAAGGCCAGGACCCATCTCCGCCAGAATACAGAACAAAGGAGCCTGCGCGGTCCGAGTCCTCTGCAGCCTaGCCCCCAGATCACGTCGGG +
Preference number: 4 (lower is better)
Translates to: QGQDPSPPEYRTKEPARSESSAA*PPDHVG
Trigger: CCCGACGTGATCTGGGGGGCAGGCTGCAGAGGACTC...GGACCGCGCAGGCTCCTTTGTTCTGTATTCTGGCGGAGATGGGTCCTGGCCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp CCAGCAGAGGCTCTGGGCCACCCACCAGCAGATGTGCCCAAGGTCCTGCAATGCTGGACCAGCGCAGCATaGAGGTCTGACCTCCGTTCC +
Preference number: 4 (lower is better)
Translates to: PAEALGHPPADVPKVLQCWTSAA*RSDLRS
Trigger: GGAACGGAGGTCAGACCTGCATGCTGCGCTGGTCCA...GCATTGCAGGACCTTGGGCACATCTGCTGGTGGGTGGCCCAGAGCCTCTGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp CCAGCAGAGGCTCTGGGCCACCCACCAGCAGATGTGCCCAAGGTCCTGCAATGCTCACCGACTCCCGGATaGGGCACAGATCCAGCACGT +
Preference number: 4 (lower is better)
Translates to: PAEALGHPPADVPKVLQCSPTPG*GTDPAR
Trigger: ACGTGCTGGATCTGTGCCGCATCCGGGAGTCGGTGA...GCATTGCAGGACCTTGGGCACATCTGCTGGTGGGTGGCCCAGAGCCTCTGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp CCAGCAGAGGCTCTGGGCCACCCACCAGCAGATGTGCCCAAGGTCCTGCAATGCTCCTTCCACTCCTCCTaGTGCCCCTTCCAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: PAEALGHPPADVPKVLQCSFHSS*CPFQQR
Trigger: CCTCTGCTGGAAGGGGCAGCAGGAGGAGTGGAAGGA...GCATTGCAGGACCTTGGGCACATCTGCTGGTGGGTGGCCCAGAGCCTCTGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp TCCCAGAAAGATCCCATCCTTCCGGACAGGACCCCAGCTGGTGAGCCCTGGCCTCGGCCGGGTCCGGTTTaGCAATGGGGAGAGTTCCCT +
Preference number: 4 (lower is better)
Translates to: SQKDPILPDRTPAGEPWPRPGPV*QWGEFP
Trigger: AGGGAACTCTCCCCATTGGCAAACCGGACCCGGCCG...AGGCCAGGGCTCACCAGCTGGGGTCCTGTCCGGAAGGATGGGATCTTTCTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp GGCCTGGTCAGGCTGCCTCCCATCGTCTTCTGCGAGCAGGCCCAGCTGGCATACGCACACAGATGGCGCTaGGGAGGATGGGAGATGATC +
Preference number: 4 (lower is better)
Translates to: GLVRLPPIVFCEQAQLAYAHRWR*GGWEMI
Trigger: GATCATCTCCCATCCTCCCCAGCGCCATCTGTGTGC...GTATGCCAGCTGGGCCTGCTCGCAGAAGACGATGGGAGGCAGCCTGACCAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp GCGGCCCACAGACAGCCAAGGAGACCCGGGGTCTGTGGCGCCGCTTTCCCATCTTCTGACCCCCACTGCTaGGAACATAACCACACTGCC +
Preference number: 4 (lower is better)
Translates to: AAHRQPRRPGVCGAAFPSSDPHC*EHNHTA
Trigger: GGCAGTGTGGTTATGTTCCCAGCAGTGGGGGTCAGA...AGATGGGAAAGCGGCGCCACAGACCCCGGGTCTCCTTGGCTGTCTGTGGGCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp TCCCACAGCCAAGCACAAGATCTAGGCCTGTGGGCACCAACAGGATGGGGCTCTGCCCACACCAGGGCCTaGTCAGGCTGCCTCCCATCG +
Preference number: 4 (lower is better)
Translates to: SHSQAQDLGLWAPTGWGSAHTRA*SGCLPS
Trigger: CGATGGGAGGCAGCCTGACCAGGCCCTGGTGTGGGC...AGAGCCCCATCCTGTTGGTGCCCACAGGCCTAGATCTTGTGCTTGGCTGTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp CCCAGAAAGATCCCATCCTTCCGGACAGGACCCCAGCTGGTGAGCCCTGGCCTGTGGGAGGCAGAGCAGTaGCCAGCACACAGCATGGTG +
Preference number: 4 (lower is better)
Translates to: PRKIPSFRTGPQLVSPGLWEAEQ*PAHSMV
Trigger: CACCATGCTGTGTGCTGGCCACTGCTCTGCCTCCCA...CAGGCCAGGGCTCACCAGCTGGGGTCCTGTCCGGAAGGATGGGATCTTTCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp GGGTCTGTGGCGCCGCTTTCCCATCTCAAGCGAGTCACAGGTCGGCGGCTTTCCCCGAAAGCCAGTCCCTaGGCCCAAGAATTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: GSVAPLSHLKRVTGRRLSPKASP*AQEFGL
Trigger: GAGGCCAAATTCTTGGGCTCAGGGACTGGCTTTCGG...GGAAAGCCGCCGACCTGTGACTCGCTTGAGATGGGAAAGCGGCGCCACAGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp GGCCTGGTCAGGCTGCCTCCCATCGTCTTCTGCGAGCAGGCCCAGCTGGCATACTCGTCATGGCGGAGGTaGGCATCGTCATCAATGGAC +
Preference number: 4 (lower is better)
Translates to: GLVRLPPIVFCEQAQLAYSSWRR*ASSSMD
Trigger: GTCCATTGATGACGATGCTCACCTCCGCCATGACGA...GTATGCCAGCTGGGCCTGCTCGCAGAAGACGATGGGAGGCAGCCTGACCAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp GGGTCTGTGGCGCCGCTTTCCCATCTCAAGCGAGTCACAGGTCGGCGGCTTTCCGTCGTGAACCCCACTTaGGGAGGGACACCGACTGTT +
Preference number: 4 (lower is better)
Translates to: GSVAPLSHLKRVTGRRLSVVNPT*GGTPTV
Trigger: AACAGTCGGTGTCCCTCCTCAAGTGGGGTTCACGAC...GGAAAGCCGCCGACCTGTGACTCGCTTGAGATGGGAAAGCGGCGCCACAGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp GGACCCATCTCCGCCAGAATACAGAACAAAGGAGCCTGCGCGGTCCCTCCCTTACAGCACACAGCATGGTaGGGCGACAGAGCGTGGGGG +
Preference number: 4 (lower is better)
Translates to: GPISARIQNKGACAVPPLQHTAW*GDRAWG
Trigger: CCCCCACGCTCTGTCGCCTCACCATGCTGTGTGCTG...TAAGGGAGGGACCGCGCAGGCTCCTTTGTTCTGTATTCTGGCGGAGATGGGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp CCCAGAAAGATCCCATCCTTCCGGACAGGACCCCAGCTGGTGAGCCCTGGCCTGCCAAGGCAGGCGCCTTaGTGTAAAACTTCCCGGCCA +
Preference number: 4 (lower is better)
Translates to: PRKIPSFRTGPQLVSPGLPRQAP*CKTSRP
Trigger: TGGCCGGGAAGTTTTACAGCAAGGCGCCTGCCTTGG...CAGGCCAGGGCTCACCAGCTGGGGTCCTGTCCGGAAGGATGGGATCTTTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp CCAGCAGAGGCTCTGGGCCACCCACCAGCAGATGTGCCCAAGGTCCTGCAATGCAACAGGATGGGGCTCTaGAGTCAGGGAGCGTCAGCT +
Preference number: 4 (lower is better)
Translates to: PAEALGHPPADVPKVLQCNRMGL*SQGASA
Trigger: AGCTGACGCTCCCTGACTGCAGAGCCCCATCCTGTT...GCATTGCAGGACCTTGGGCACATCTGCTGGTGGGTGGCCCAGAGCCTCTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp CCCAGAAAGATCCCATCCTTCCGGACAGGACCCCAGCTGGTGAGCCCTGGCCTGCTTGGCCTCCCCAGGTaGTGGGATTACAGGCGTGAA +
Preference number: 4 (lower is better)
Translates to: PRKIPSFRTGPQLVSPGLLGLPR*WDYRRE
Trigger: TTCACGCCTGTAATCCCAGCACCTGGGGAGGCCAAG...CAGGCCAGGGCTCACCAGCTGGGGTCCTGTCCGGAAGGATGGGATCTTTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp GGCCTGGTCAGGCTGCCTCCCATCGTCTTCTGCGAGCAGGCCCAGCTGGCATACACTCAGTCGGCAGGCTaGGTTTGGGCTGGTTTTTGC +
Preference number: 4 (lower is better)
Translates to: GLVRLPPIVFCEQAQLAYTQSAG*VWAGFC
Trigger: GCAAAAACCAGCCCAAACCCAGCCTGCCGACTGAGT...GTATGCCAGCTGGGCCTGCTCGCAGAAGACGATGGGAGGCAGCCTGACCAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp GGGTCTGTGGCGCCGCTTTCCCATCTCAAGCGAGTCACAGGTCGGCGGCTTTCCCGTTGTCAGCCATGTTaGGGTCAGTTCCAGCCGCCT +
Preference number: 4 (lower is better)
Translates to: GSVAPLSHLKRVTGRRLSRCQPC*GQFQPP
Trigger: AGGCGGCTGGAACTGACCCCAACATGGCTGACAACG...GGAAAGCCGCCGACCTGTGACTCGCTTGAGATGGGAAAGCGGCGCCACAGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp CCCAGAAAGATCCCATCCTTCCGGACAGGACCCCAGCTGGTGAGCCCTGGCCTGAATTGCGGAGGTATCTaGGTGAGGCGTAGGGCGGCT +
Preference number: 4 (lower is better)
Translates to: PRKIPSFRTGPQLVSPGLNCGGI*VRRRAA
Trigger: AGCCGCCCTACGCCTCACCCAGATACCTCCGCAATT...CAGGCCAGGGCTCACCAGCTGGGGTCCTGTCCGGAAGGATGGGATCTTTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp GGCCTGGTCAGGCTGCCTCCCATCGTCTTCTGCGAGCAGGCCCAGCTGGCATACGTGTGGGGGAAAAGATaGAAAGGCCCTGGAGCACAG +
Preference number: 4 (lower is better)
Translates to: GLVRLPPIVFCEQAQLAYVWGKR*KGPGAQ
Trigger: CTGTGCTCCAGGGCCTTTCCATCTTTTCCCCCACAC...GTATGCCAGCTGGGCCTGCTCGCAGAAGACGATGGGAGGCAGCCTGACCAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp CCAGCAGAGGCTCTGGGCCACCCACCAGCAGATGTGCCCAAGGTCCTGCAATGCACGAACCAGCTGTCCTaGGCGTACGAACGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: PAEALGHPPADVPKVLQCTNQLS*AYERCE
Trigger: CTCACACCGTTCGTACGCCCAGGACAGCTGGTTCGT...GCATTGCAGGACCTTGGGCACATCTGCTGGTGGGTGGCCCAGAGCCTCTGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp GGACCCATCTCCGCCAGAATACAGAACAAAGGAGCCTGCGCGGTCCCTCCCTTATCCCGGCCAGCCGGGTaGGTTCCTCGAAGGACACTG +
Preference number: 4 (lower is better)
Translates to: GPISARIQNKGACAVPPLSRPAG*VPRRTL
Trigger: CAGTGTCCTTCGAGGAACCCACCCGGCTGGCCGGGA...TAAGGGAGGGACCGCGCAGGCTCCTTTGTTCTGTATTCTGGCGGAGATGGGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp CCAGCAGAGGCTCTGGGCCACCCACCAGCAGATGTGCCCAAGGTCCTGCAATGCCCCTGCGGCATGTTTTaGTGTCAGACCACTCAGCCC +
Preference number: 4 (lower is better)
Translates to: PAEALGHPPADVPKVLQCPCGMF*CQTTQP
Trigger: GGGCTGAGTGGTCTGACACCAAAACATGCCGCAGGG...GCATTGCAGGACCTTGGGCACATCTGCTGGTGGGTGGCCCAGAGCCTCTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp TCCCACAGCCAAGCACAAGATCTAGGCCTGTGGGCACCAACAGGATGGGGCTCTGGCTGCAGTCCGGTGTaGGAGGCAGAGCAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: SHSQAQDLGLWAPTGWGSGCSPV*EAEQWP
Trigger: TGGCCACTGCTCTGCCTCCCACACCGGACTGCAGCC...AGAGCCCCATCCTGTTGGTGCCCACAGGCCTAGATCTTGTGCTTGGCTGTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR CAA 72 bp CCGGCCAGCCGGGTGGGTTCCTCGAAGGACACTGGCTaGCTCTACACTAGGGAGAGGAGGCTGACCTGCAAA +
Preference number: 4 (lower is better)
Translates to: PASRVGSSKDTG*LYTRERRLTCK
Trigger: TTTGCAGGTCAGCCTCCTCTCCCTAGTGTAGAGCAAGCCAGTGTCCTTCGAGGAACCCACCCGGCTGGCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR CAA 72 bp AGCCAGTGTTCCTTTCAGGGTCAAGGAGGGCTGTCCTaGTTGGAAGCACCGGCACCACAGCCCTCCCTGCGG +
Preference number: 4 (lower is better)
Translates to: SQCSFQGQGGLS*LEAPAPQPSLR
Trigger: CCGCAGGGAGGGCTGTGGTGCCGGTGCTTCCAACAAGGACAGCCCTCCTTGACCCTGAAAGGAACACTGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp GGGTCTGTGGCGCCGCTTTCCCATCTCAAGCGAGTCACAGGTCGGCGGCTTTCCGCTGGTTCTGGGCCATaGGCTCCTTGTAGGAATGCT +
Preference number: 4 (lower is better)
Translates to: GSVAPLSHLKRVTGRRLSAGSGP*APCRNA
Trigger: AGCATTCCTACAAGGAGCTCATGGCCCAGAACCAGC...GGAAAGCCGCCGACCTGTGACTCGCTTGAGATGGGAAAGCGGCGCCACAGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp GCGGCCCACAGACAGCCAAGGAGACCCGGGGTCTGTGGCGCCGCTTTCCCATCTTCTCGCCCTGGAAGGTaGAGAGATATTTCCGCTTCA +
Preference number: 4 (lower is better)
Translates to: AAHRQPRRPGVCGAAFPSSRPGR*RDISAS
Trigger: TGAAGCGGAAATATCTCTTCACCTTCCAGGGCGAGA...AGATGGGAAAGCGGCGCCACAGACCCCGGGTCTCCTTGGCTGTCTGTGGGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp CAAGGCCAGGACCCATCTCCGCCAGAATACAGAACAAAGGAGCCTGCGCGGTCCTCGAGCCATTCACAGTaGGGCCTCACCTGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: QGQDPSPPEYRTKEPARSSSHSQ*GLTCPG
Trigger: CCCAGGACAGGTGAGGCCTCACTGTGAATGGCTCGA...GGACCGCGCAGGCTCCTTTGTTCTGTATTCTGGCGGAGATGGGTCCTGGCCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp CCAGCAGAGGCTCTGGGCCACCCACCAGCAGATGTGCCCAAGGTCCTGCAATGCAGGAATGCCCCTCGATaGCATCTCACCCATCAGCTG +
Preference number: 4 (lower is better)
Translates to: PAEALGHPPADVPKVLQCRNAPR*HLTHQL
Trigger: CAGCTGATGGGTGAGATGTCATCGAGGGGCATTCCT...GCATTGCAGGACCTTGGGCACATCTGCTGGTGGGTGGCCCAGAGCCTCTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp CAAGGCCAGGACCCATCTCCGCCAGAATACAGAACAAAGGAGCCTGCGCGGTCCCGCTTGGCCTCCAGCTaGAGGAGCTCTTCACTCACC +
Preference number: 4 (lower is better)
Translates to: QGQDPSPPEYRTKEPARSRLASS*RSSSLT
Trigger: GGTGAGTGAAGAGCTCCTGCAGCTGGAGGCCAAGCG...GGACCGCGCAGGCTCCTTTGTTCTGTATTCTGGCGGAGATGGGTCCTGGCCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp GGGTCTGTGGCGCCGCTTTCCCATCTCAAGCGAGTCACAGGTCGGCGGCTTTCCAGCTGGAGCAGGTCCTaGTTGGCGTTCTCAATGCTC +
Preference number: 4 (lower is better)
Translates to: GSVAPLSHLKRVTGRRLSSWSRS*LAFSML
Trigger: GAGCATTGAGAACGCCAAGCAGGACCTGCTCCAGCT...GGAAAGCCGCCGACCTGTGACTCGCTTGAGATGGGAAAGCGGCGCCACAGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp ATTCACAGTGAGGCCTCACCTGTCCTGGGATCGCAGGCACACACAGCTCCCCACCAGTTCCAGCCGCCTTaGCTGAACGGTGGGGGATCT +
Preference number: 4 (lower is better)
Translates to: IHSEASPVLGSQAHTAPHQFQPP*LNGGGS
Trigger: AGATCCCCCACCGTTCAGGCAAGGCGGCTGGAACTG...GTGGGGAGCTGTGTGTGCCTGCGATCCCAGGACAGGTGAGGCCTCACTGTGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp CAAGGCCAGGACCCATCTCCGCCAGAATACAGAACAAAGGAGCCTGCGCGGTCCACACTGTGGCCACCTTaGTGCCTCTCGCTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: QGQDPSPPEYRTKEPARSTLWPP*CLSLRR
Trigger: CCTCCTCAGCGAGAGGCAGCAAGGTGGCCACAGTGT...GGACCGCGCAGGCTCCTTTGTTCTGTATTCTGGCGGAGATGGGTCCTGGCCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp TCCCACAGCCAAGCACAAGATCTAGGCCTGTGGGCACCAACAGGATGGGGCTCTAGAACGAGGCGCTCCTaGACCCTGCGAGCCAGGACA +
Preference number: 4 (lower is better)
Translates to: SHSQAQDLGLWAPTGWGSRTRRS*TLRART
Trigger: TGTCCTGGCTCGCAGGGTGCAGGAGCGCCTCGTTCT...AGAGCCCCATCCTGTTGGTGCCCACAGGCCTAGATCTTGTGCTTGGCTGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp TCCCACAGCCAAGCACAAGATCTAGGCCTGTGGGCACCAACAGGATGGGGCTCTAGGGCCTGGTCAGGCTaGCTCCCATCGTCTTCTGCG +
Preference number: 4 (lower is better)
Translates to: SHSQAQDLGLWAPTGWGSRAWSG*LPSSSA
Trigger: CGCAGAAGACGATGGGAGGCAGCCTGACCAGGCCCT...AGAGCCCCATCCTGTTGGTGCCCACAGGCCTAGATCTTGTGCTTGGCTGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp CAAGGCCAGGACCCATCTCCGCCAGAATACAGAACAAAGGAGCCTGCGCGGTCCTCAGCTCTTGGCGCTTaGCCTCCAGCTGCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: QGQDPSPPEYRTKEPARSSALGA*PPAAGA
Trigger: AGCTCCTGCAGCTGGAGGCCAAGCGCCAAGAGCTGA...GGACCGCGCAGGCTCCTTTGTTCTGTATTCTGGCGGAGATGGGTCCTGGCCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp ATTCACAGTGAGGCCTCACCTGTCCTGGGATCGCAGGCACACACAGCTCCCCACTCGCTGTTCAGCTCTTaGCGCTTGGCCTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: IHSEASPVLGSQAHTAPHSLFSS*RLASSC
Trigger: GCAGCTGGAGGCCAAGCGCCAAGAGCTGAACAGCGA...GTGGGGAGCTGTGTGTGCCTGCGATCCCAGGACAGGTGAGGCCTCACTGTGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp GCGGCCCACAGACAGCCAAGGAGACCCGGGGTCTGTGGCGCCGCTTTCCCATCTGCTCACAGGAGTAGTTaGAGTTGTAGAGCCAGGACT +
Preference number: 4 (lower is better)
Translates to: AAHRQPRRPGVCGAAFPSAHRSS*SCRART
Trigger: AGTCCTGGCTCTACAACTCCAACTACTCCTGTGAGC...AGATGGGAAAGCGGCGCCACAGACCCCGGGTCTCCTTGGCTGTCTGTGGGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp CCAGCAGAGGCTCTGGGCCACCCACCAGCAGATGTGCCCAAGGTCCTGCAATGCAGAGCCATCTGGGAGTaGCGTCTTCAGCCCCTATTC +
Preference number: 4 (lower is better)
Translates to: PAEALGHPPADVPKVLQCRAIWE*RLQPLF
Trigger: GAATAGGGGCTGAAGACGCCACTCCCAGATGGCTCT...GCATTGCAGGACCTTGGGCACATCTGCTGGTGGGTGGCCCAGAGCCTCTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp CCAGCAGAGGCTCTGGGCCACCCACCAGCAGATGTGCCCAAGGTCCTGCAATGCACAGATAACACAGGATaGGGCTCCAGACAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: PAEALGHPPADVPKVLQCTDNTG*GSRQRR
Trigger: CCGCCTCTGTCTGGAGCCCCATCCTGTGTTATCTGT...GCATTGCAGGACCTTGGGCACATCTGCTGGTGGGTGGCCCAGAGCCTCTGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp GGGTCTGTGGCGCCGCTTTCCCATCTCAAGCGAGTCACAGGTCGGCGGCTTTCCACACACCACACTCTTTaGCTCCCCGAGGGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: GSVAPLSHLKRVTGRRLSTHHTL*LPEGRR
Trigger: CCTTCTTCCCTCGGGGAGCCAAAGAGTGTGGTGTGT...GGAAAGCCGCCGACCTGTGACTCGCTTGAGATGGGAAAGCGGCGCCACAGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR CAA 72 bp CAGGCCCGCAAGAGGGCCAAGTTCATCCCTTTCTGGTaGCTGCACACAGATGGCGCTGGGGAGGATGGGAGA +
Preference number: 4 (lower is better)
Translates to: QARKRAKFIPFW*LHTDGAGEDGR
Trigger: TCTCCCATCCTCCCCAGCGCCATCTGTGTGCAGCAACCAGAAAGGGATGAACTTGGCCCTCTTGCGGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR CAA 72 bp TTTGGAAACACAGTCCTGGCGGCGGCCGGGTCCGGTTaGCCAATGGGGAGAGTTCCCTTAAGCCGAGCTAGC +
Preference number: 4 (lower is better)
Translates to: FGNTVLAAAGSG*PMGRVPLSRAS
Trigger: GCTAGCTCGGCTTAAGGGAACTCTCCCCATTGGCAAACCGGACCCGGCCGCCGCCAGGACTGTGTTTCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR CAA 72 bp CAGTGTTCCTTTCAGGGTCAAGGAGGGCTGTCCTTGTaGGAAGCACCGGCACCACAGCCCTCCCTGCGGCAT +
Preference number: 4 (lower is better)
Translates to: QCSFQGQGGLSL*EAPAPQPSLRH
Trigger: ATGCCGCAGGGAGGGCTGTGGTGCCGGTGCTTCCAACAAGGACAGCCCTCCTTGACCCTGAAAGGAACACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp CCCAGAAAGATCCCATCCTTCCGGACAGGACCCCAGCTGGTGAGCCCTGGCCTGCAGCACACGACTTCTTaGAAGAGTGAACCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: PRKIPSFRTGPQLVSPGLQHTTS*KSEPPG
Trigger: CCCTGGAGGTTCACTCTTTCAAGAAGTCGTGTGCTG...CAGGCCAGGGCTCACCAGCTGGGGTCCTGTCCGGAAGGATGGGATCTTTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp GGAGTGGAAAGTGGTAACTCGGGTTGTGAATGCCCGTTAGATTCCAAGGCTGGACGCAGCATGCAGGTCTaGCCTCCGTTCCCCGCGCCC +
Preference number: 4 (lower is better)
Translates to: GVESGNSGCECPLDSKAGRSMQV*PPFPAP
Trigger: GGGCGCGGGGAACGGAGGTCAGACCTGCATGCTGCG...TCCAGCCTTGGAATCTAACGGGCATTCACAACCCGAGTTACCACTTTCCACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp TCCCAGAAAGATCCCATCCTTCCGGACAGGACCCCAGCTGGTGAGCCCTGGCCTCCTGAAAAGCCTGCTTaGCCAAGGGATCCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: SQKDPILPDRTPAGEPWPPEKPA*PRDPGS
Trigger: GCTACCTGGATCCCTTGGTCAAGCAGGCTTTTCAGG...AGGCCAGGGCTCACCAGCTGGGGTCCTGTCCGGAAGGATGGGATCTTTCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp GGGTCTGTGGCGCCGCTTTCCCATCTCAAGCGAGTCACAGGTCGGCGGCTTTCCCTTCTGAGCAGGAAATaGACCTCGGTAACACGAGGC +
Preference number: 4 (lower is better)
Translates to: GSVAPLSHLKRVTGRRLSLLSRK*TSVTRG
Trigger: GCCTCGTGTTACCGAGGTTCATTTCCTGCTCAGAAG...GGAAAGCCGCCGACCTGTGACTCGCTTGAGATGGGAAAGCGGCGCCACAGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp CCCAGAAAGATCCCATCCTTCCGGACAGGACCCCAGCTGGTGAGCCCTGGCCTGTCAACATCACCACCGTaGACTGCTCTCGGGGAACAT +
Preference number: 4 (lower is better)
Translates to: PRKIPSFRTGPQLVSPGLSTSPP*TALGEH
Trigger: ATGTTCCCCGAGAGCAGTTCACGGTGGTGATGTTGA...CAGGCCAGGGCTCACCAGCTGGGGTCCTGTCCGGAAGGATGGGATCTTTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp TCCCAGAAAGATCCCATCCTTCCGGACAGGACCCCAGCTGGTGAGCCCTGGCCTCCCGGAACCCAAACATaGTTTCGTCATGGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: SQKDPILPDRTPAGEPWPPGTQT*FRHGGG
Trigger: ACCTCCGCCATGACGAAATCATGTTTGGGTTCCGGG...AGGCCAGGGCTCACCAGCTGGGGTCCTGTCCGGAAGGATGGGATCTTTCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp CAAGGCCAGGACCCATCTCCGCCAGAATACAGAACAAAGGAGCCTGCGCGGTCCGCACAGAATCCACCCTaGACTGCGTGTACAGGAGGG +
Preference number: 4 (lower is better)
Translates to: QGQDPSPPEYRTKEPARSAQNPP*TACTGG
Trigger: CCCTCCTGTACACGCAGTTCAGGGTGGATTCTGTGC...GGACCGCGCAGGCTCCTTTGTTCTGTATTCTGGCGGAGATGGGTCCTGGCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp CCCAGAAAGATCCCATCCTTCCGGACAGGACCCCAGCTGGTGAGCCCTGGCCTGTGCTGCAAACTTGCCTaGTCAGTCGTGAACCCCACT +
Preference number: 4 (lower is better)
Translates to: PRKIPSFRTGPQLVSPGLCCKLA*SVVNPT
Trigger: AGTGGGGTTCACGACTGATCAGGCAAGTTTGCAGCA...CAGGCCAGGGCTCACCAGCTGGGGTCCTGTCCGGAAGGATGGGATCTTTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp AAGGATAAGCCAGTGACACAAGGCCAGGACCCATCTCCGCCAGAATACAGAACAATCCGCCGCTCCCCCTaGCGGCCGGCAGCCATTTCC +
Preference number: 4 (lower is better)
Translates to: KDKPVTQGQDPSPPEYRTIRRSP*RPAAIS
Trigger: GGAAATGGCTGCCGGCCGGCAGGGGGAGCGGCGGAT...TGTTCTGTATTCTGGCGGAGATGGGTCCTGGCCTTGTGTCACTGGCTTATCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp ATTCACAGTGAGGCCTCACCTGTCCTGGGATCGCAGGCACACACAGCTCCCCACCACCACAGCCCTCCCTaGGGCATGTTTTGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: IHSEASPVLGSQAHTAPHHHSPP*GMFWCQ
Trigger: CTGACACCAAAACATGCCGCAGGGAGGGCTGTGGTG...GTGGGGAGCTGTGTGTGCCTGCGATCCCAGGACAGGTGAGGCCTCACTGTGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp GCGGCCCACAGACAGCCAAGGAGACCCGGGGTCTGTGGCGCCGCTTTCCCATCTAAGCAATCAAGCAGGTaGCTTCTCTCAGGTCACTCT +
Preference number: 4 (lower is better)
Translates to: AAHRQPRRPGVCGAAFPSKQSSR*LLSGHS
Trigger: AGAGTGACCTGAGAGAAGGCACCTGCTTGATTGCTT...AGATGGGAAAGCGGCGCCACAGACCCCGGGTCTCCTTGGCTGTCTGTGGGCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp GGACCCATCTCCGCCAGAATACAGAACAAAGGAGCCTGCGCGGTCCCTCCCTTAAGGGACAGCTTGGGCTaGTTCTGGGCCATGAGCTCC +
Preference number: 4 (lower is better)
Translates to: GPISARIQNKGACAVPPLRDSLG*FWAMSS
Trigger: GGAGCTCATGGCCCAGAACCAGCCCAAGCTGTCCCT...TAAGGGAGGGACCGCGCAGGCTCCTTTGTTCTGTATTCTGGCGGAGATGGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp GGCCTGGTCAGGCTGCCTCCCATCGTCTTCTGCGAGCAGGCCCAGCTGGCATACGGCTTCCGAGTGATGTaGGAGACAAGGAAGTTCATG +
Preference number: 4 (lower is better)
Translates to: GLVRLPPIVFCEQAQLAYGFRVM*ETRKFM
Trigger: CATGAACTTCCTTGTCTCCCACATCACTCGGAAGCC...GTATGCCAGCTGGGCCTGCTCGCAGAAGACGATGGGAGGCAGCCTGACCAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp CCCAGAAAGATCCCATCCTTCCGGACAGGACCCCAGCTGGTGAGCCCTGGCCTGATCCTCAAAAATCGCTaGCCCCAGCAGCAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: PRKIPSFRTGPQLVSPGLILKNR*PQQQEA
Trigger: AGCTTCCTGCTGCTGGGGCCAGCGATTTTTGAGGAT...CAGGCCAGGGCTCACCAGCTGGGGTCCTGTCCGGAAGGATGGGATCTTTCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp CCCAGAAAGATCCCATCCTTCCGGACAGGACCCCAGCTGGTGAGCCCTGGCCTGCAGGGGCATGACCTATaGACCGAATCGAGCCATTCA +
Preference number: 4 (lower is better)
Translates to: PRKIPSFRTGPQLVSPGLQGHDL*TESSHS
Trigger: TGAATGGCTCGATTCGGTCCATAGGTCATGCCCCTG...CAGGCCAGGGCTCACCAGCTGGGGTCCTGTCCGGAAGGATGGGATCTTTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp GGACCCATCTCCGCCAGAATACAGAACAAAGGAGCCTGCGCGGTCCCTCCCTTACACTCAGCCAGGCGCTaGCGCTCAAACCTAGCGGAA +
Preference number: 4 (lower is better)
Translates to: GPISARIQNKGACAVPPLHSARR*RSNLAE
Trigger: TTCCGCTAGGTTTGAGCGCCAGCGCCTGGCTGAGTG...TAAGGGAGGGACCGCGCAGGCTCCTTTGTTCTGTATTCTGGCGGAGATGGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR CAA 72 bp GAAGCACCGGCACCACAGCCCTCCCTGCGGCATGTTTaGGTGTCAGACCACTCAGCCCTTCTTAGATCCACC +
Preference number: 4 (lower is better)
Translates to: EAPAPQPSLRHV*VSDHSALLRST
Trigger: GGTGGATCTAAGAAGGGCTGAGTGGTCTGACACCAAAACATGCCGCAGGGAGGGCTGTGGTGCCGGTGCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp GGGTCCGGTTTGCCAATGGGGAGAGTTCCCTTAAGCCGAGCTAGCCCTACAGGTCCTTCAGGGTGGCAATaGTCCGGTCATCGTAGTCGG +
Preference number: 4 (lower is better)
Translates to: GSGLPMGRVPLSRASPTGPSGWQ*SGHRSR
Trigger: CCGACTACGATGACCGGATCATTGCCACCCTGAAGG...ACCTGTAGGGCTAGCTCGGCTTAAGGGAACTCTCCCCATTGGCAAACCGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp ATTCACAGTGAGGCCTCACCTGTCCTGGGATCGCAGGCACACACAGCTCCCCACAATTCCACCAGGACCTaGTCCAGCTTGCTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: IHSEASPVLGSQAHTAPHNSTRT*SSLLSC
Trigger: GCAGGACAGCAAGCTGGATCAGGTCCTGGTGGAATT...GTGGGGAGCTGTGTGTGCCTGCGATCCCAGGACAGGTGAGGCCTCACTGTGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp TCCCAGAAAGATCCCATCCTTCCGGACAGGACCCCAGCTGGTGAGCCCTGGCCTCATGGGCTAAATCCCTaGCAAATGCCACTCACACCC +
Preference number: 4 (lower is better)
Translates to: SQKDPILPDRTPAGEPWPHGLNP*QMPLTP
Trigger: GGGTGTGAGTGGCATTTGTCAGGGATTTAGCCCATG...AGGCCAGGGCTCACCAGCTGGGGTCCTGTCCGGAAGGATGGGATCTTTCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp GGAGTGGAAAGTGGTAACTCGGGTTGTGAATGCCCGTTAGATTCCAAGGCTGGACTTGCTGCCTCTCGCTaGGGAGGGCGTGCCCCTCAG +
Preference number: 4 (lower is better)
Translates to: GVESGNSGCECPLDSKAGLAASR*GGRAPQ
Trigger: CTGAGGGGCACGCCCTCCTCAGCGAGAGGCAGCAAG...TCCAGCCTTGGAATCTAACGGGCATTCACAACCCGAGTTACCACTTTCCACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp GGACCCATCTCCGCCAGAATACAGAACAAAGGAGCCTGCGCGGTCCCTCCCTTACACAGATCCAGCACGTaGTTCACCTCGCACAGCTCG +
Preference number: 4 (lower is better)
Translates to: GPISARIQNKGACAVPPLHRSST*FTSHSS
Trigger: CGAGCTGTGCGAGGTGAAGCACGTGCTGGATCTGTG...TAAGGGAGGGACCGCGCAGGCTCCTTTGTTCTGTATTCTGGCGGAGATGGGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp GGACCCATCTCCGCCAGAATACAGAACAAAGGAGCCTGCGCGGTCCCTCCCTTAGCTCTCGGGGAACATTaGCTCCAAGCGCTGCCTGAA +
Preference number: 4 (lower is better)
Translates to: GPISARIQNKGACAVPPLALGEH*LQALPE
Trigger: TTCAGGCAGCGCTTGGAGGCAATGTTCCCCGAGAGC...TAAGGGAGGGACCGCGCAGGCTCCTTTGTTCTGTATTCTGGCGGAGATGGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp GGAGTAGTTGGAGTTGTAGAGCCAGGACTGATGGGGGATGTCCCATGCGTGGTACAGGGAAGCCCACGATaGGGTCCCGAGCTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: GVVGVVEPGLMGDVPCVVQGSPR*GPELLS
Trigger: GGAGAGAAGCTCGGGACCGCATCGTGGGCTTCCCTG...TACCACGCATGGGACATCCCCCATCAGTCCTGGCTCTACAACTCCAACTACTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522698.1
CDS-3UTR GCA 90 bp GGACCCATCTCCGCCAGAATACAGAACAAAGGAGCCTGCGCGGTCCCTCCCTTAATGGGGGATGTCCCATaGGTGGTAACGGCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: GPISARIQNKGACAVPPLMGDVP*VVTARE
Trigger: TTCCCTGGCCGTTACCACGCATGGGACATCCCCCAT...TAAGGGAGGGACCGCGCAGGCTCCTTTGTTCTGTATTCTGGCGGAGATGGGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp TCCCAGAAAGATCCCATCCTTCCGGACAGGACCCCAGCTGGTGAGCCCTGGCCTAAGTTGATGCACTTGTaGCGCTCGTGGAAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: SQKDPILPDRTPAGEPWPKLMHL*RSWKWE
Trigger: CTCCCACTTCCACGAGCGGCACAAGTGCATCAACTT...AGGCCAGGGCTCACCAGCTGGGGTCCTGTCCGGAAGGATGGGATCTTTCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp GGGTCTGTGGCGCCGCTTTCCCATCTCAAGCGAGTCACAGGTCGGCGGCTTTCCCTTCACCGGCACCTGTaGTGGGATTTCCATGAAGTT +
Preference number: 4 (lower is better)
Translates to: GSVAPLSHLKRVTGRRLSLHRHL*WDFHEV
Trigger: AACTTCATGGAAATCCCACCACAGGTGCCGGTGAAG...GGAAAGCCGCCGACCTGTGACTCGCTTGAGATGGGAAAGCGGCGCCACAGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp CTCACCCATCAGCTGCTGCAAACTTGCCTGATCAGTCGTGAACCCCACTTGAGGGGTAACACGAGGCTTTaGCACCACCAGGGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: LTHQLLQTCLISREPHLRGNTRL*HHQGRL
Trigger: GAGGCGGCCCTGGTGGTGCCAAAGCCTCGTGTTACC...CCTCAAGTGGGGTTCACGACTGATCAGGCAAGTTTGCAGCAGCTGATGGGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp GGACCCATCTCCGCCAGAATACAGAACAAAGGAGCCTGCGCGGTCCCTCCCTTACAGGCCCAGTGTGGCTaGCTTCAAGATAAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: GPISARIQNKGACAVPPLQAQCG*LQDKGS
Trigger: GCTGCCTTTATCTTGAAGTCAGCCACACTGGGCCTG...TAAGGGAGGGACCGCGCAGGCTCCTTTGTTCTGTATTCTGGCGGAGATGGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp TCCCACAGCCAAGCACAAGATCTAGGCCTGTGGGCACCAACAGGATGGGGCTCTTTGCCTGATCAGTCGTaGACCCCACTTGAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: SHSQAQDLGLWAPTGWGSLPDQS*TPLEEG
Trigger: TCCCTCCTCAAGTGGGGTTCACGACTGATCAGGCAA...AGAGCCCCATCCTGTTGGTGCCCACAGGCCTAGATCTTGTGCTTGGCTGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp GGGTCTGTGGCGCCGCTTTCCCATCTCAAGCGAGTCACAGGTCGGCGGCTTTCCATAAACGTTAGCTCGTaGTGTCGCCTGAAAAGCCTG +
Preference number: 4 (lower is better)
Translates to: GSVAPLSHLKRVTGRRLSINVSS*CRLKSL
Trigger: CAGGCTTTTCAGGCGACAGCACGAGCTAACGTTTAT...GGAAAGCCGCCGACCTGTGACTCGCTTGAGATGGGAAAGCGGCGCCACAGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp ACAGAAAGGGTAAGGAAGAGACCTTGTCCAGGCCCGCAAGAGGGCCAAGTTCATCCGCTCTCCACACAGTaGCCACTCAGTCGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: TERVRKRPCPGPQEGQVHPLSTQ*PLSRQA
Trigger: AGCCTGCCGACTGAGTGGGCACTGTGTGGAGAGCGG...ATGAACTTGGCCCTCTTGCGGGCCTGGACAAGGTCTCTTCCTTACCCTTTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp ATTCACAGTGAGGCCTCACCTGTCCTGGGATCGCAGGCACACACAGCTCCCCACTCATCCCTTTCTGGTTaGTGCACACAGATGGCGCTG +
Preference number: 4 (lower is better)
Translates to: IHSEASPVLGSQAHTAPHSSLSG*CTQMAL
Trigger: CAGCGCCATCTGTGTGCAGCAACCAGAAAGGGATGA...GTGGGGAGCTGTGTGTGCCTGCGATCCCAGGACAGGTGAGGCCTCACTGTGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp CAAGGCCAGGACCCATCTCCGCCAGAATACAGAACAAAGGAGCCTGCGCGGTCCGAGAGGAGGCTGACCTaGAAACCACTTCAGACCACA +
Preference number: 4 (lower is better)
Translates to: QGQDPSPPEYRTKEPARSERRLT*KPLQTT
Trigger: TGTGGTCTGAAGTGGTTTGCAGGTCAGCCTCCTCTC...GGACCGCGCAGGCTCCTTTGTTCTGTATTCTGGCGGAGATGGGTCCTGGCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp CCAGCAGAGGCTCTGGGCCACCCACCAGCAGATGTGCCCAAGGTCCTGCAATGCAACTCGGGTTGTGAATaGCCGTTAGATTCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: PAEALGHPPADVPKVLQCNSGCE*PLDSKA
Trigger: AGCCTTGGAATCTAACGGGCATTCACAACCCGAGTT...GCATTGCAGGACCTTGGGCACATCTGCTGGTGGGTGGCCCAGAGCCTCTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp AAGGATAAGCCAGTGACACAAGGCCAGGACCCATCTCCGCCAGAATACAGAACATCGCTGAGGAGGGCGTaGCCCTCAGAGCCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: KDKPVTQGQDPSPPEYRTSLRRA*PSEPVC
Trigger: GCAGACAGGCTCTGAGGGGCACGCCCTCCTCAGCGA...TGTTCTGTATTCTGGCGGAGATGGGTCCTGGCCTTGTGTCACTGGCTTATCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp GCCCACAGCACGTGTGTTTCAACAGAAGAGCAGGATAGAAAGAGCCATCTGGGAGCGCTCACAGTGGCCTaGAGAGCCCTGGGACGGTGT +
Preference number: 4 (lower is better)
Translates to: AHSTCVSTEEQDRKSHLGALTVA*RALGRC
Trigger: ACACCGTCCCAGGGCTCTGCAGGCCACTGTGAGCGC...TCCCAGATGGCTCTTTCTATCCTGCTCTTCTGTTGAAACACACGTGCTGTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp CAAGGCCAGGACCCATCTCCGCCAGAATACAGAACAAAGGAGCCTGCGCGGTCCCAGCTGCTGCAAACTTaGCTGATCAGTCGTGAACCC +
Preference number: 4 (lower is better)
Translates to: QGQDPSPPEYRTKEPARSQLLQT*LISREP
Trigger: GGGTTCACGACTGATCAGGCAAGTTTGCAGCAGCTG...GGACCGCGCAGGCTCCTTTGTTCTGTATTCTGGCGGAGATGGGTCCTGGCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp CAAGGCCAGGACCCATCTCCGCCAGAATACAGAACAAAGGAGCCTGCGCGGTCCGGAGCGGCTGGGATCTaGATGCGAGTCCTAATCATA +
Preference number: 4 (lower is better)
Translates to: QGQDPSPPEYRTKEPARSGAAGI*MRVLII
Trigger: TATGATTAGGACTCGCATCCAGATCCCAGCCGCTCC...GGACCGCGCAGGCTCCTTTGTTCTGTATTCTGGCGGAGATGGGTCCTGGCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp TCCCAGAAAGATCCCATCCTTCCGGACAGGACCCCAGCTGGTGAGCCCTGGCCTGAGCATCGTCATCAATaGACAGGATGGCCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: SQKDPILPDRTPAGEPWPEHRHQ*TGWPLS
Trigger: AGACAGAGGCCATCCTGTCCATTGATGACGATGCTC...AGGCCAGGGCTCACCAGCTGGGGTCCTGTCCGGAAGGATGGGATCTTTCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp ATTCACAGTGAGGCCTCACCTGTCCTGGGATCGCAGGCACACACAGCTCCCCACCACCTGTCAGCACCATaGACAGCTCACAGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: IHSEASPVLGSQAHTAPHHLSAP*TAHRSS
Trigger: ACTACTCCTGTGAGCTGTCCATGGTGCTGACAGGTG...GTGGGGAGCTGTGTGTGCCTGCGATCCCAGGACAGGTGAGGCCTCACTGTGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp GGGTCTGTGGCGCCGCTTTCCCATCTCAAGCGAGTCACAGGTCGGCGGCTTTCCCTCCCAGGGATTCACTaGGAAGAGAATGTGAGTTAC +
Preference number: 4 (lower is better)
Translates to: GSVAPLSHLKRVTGRRLSLPGIH*EENVSY
Trigger: GTAACTCACATTCTCTTCCCAGTGAATCCCTGGGAG...GGAAAGCCGCCGACCTGTGACTCGCTTGAGATGGGAAAGCGGCGCCACAGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp CTCACCCATCAGCTGCTGCAAACTTGCCTGATCAGTCGTGAACCCCACTTGAGGTGGGCACCAACAGGATaGGGCTCTGCAGTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LTHQLLQTCLISREPHLRWAPTG*GSAVRE
Trigger: CTCCCTGACTGCAGAGCCCCATCCTGTTGGTGCCCA...CCTCAAGTGGGGTTCACGACTGATCAGGCAAGTTTGCAGCAGCTGATGGGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp GGCCTGGTCAGGCTGCCTCCCATCGTCTTCTGCGAGCAGGCCCAGCTGGCATACAGGACAATCGTAACATaGAGATGGATGGCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: GLVRLPPIVFCEQAQLAYRTIVT*RWMAGR
Trigger: TCTTCCAGCCATCCATCTCCATGTTACGATTGTCCT...GTATGCCAGCTGGGCCTGCTCGCAGAAGACGATGGGAGGCAGCCTGACCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp CAAGGCCAGGACCCATCTCCGCCAGAATACAGAACAAAGGAGCCTGCGCGGTCCGACTTCTTGAAAGAGTaGACCTCCAGGGCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: QGQDPSPPEYRTKEPARSDFLKE*TSRACS
Trigger: AGAGCAAGCCCTGGAGGTTCACTCTTTCAAGAAGTC...GGACCGCGCAGGCTCCTTTGTTCTGTATTCTGGCGGAGATGGGTCCTGGCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp ATTCACAGTGAGGCCTCACCTGTCCTGGGATCGCAGGCACACACAGCTCCCCACCAAGAATTTGGCCTCTaGGGGCAACACAGGGTCAAA +
Preference number: 4 (lower is better)
Translates to: IHSEASPVLGSQAHTAPHQEFGL*GQHRVK
Trigger: TTTGACCCTGTGTTGCCCTCAGAGGCCAAATTCTTG...GTGGGGAGCTGTGTGTGCCTGCGATCCCAGGACAGGTGAGGCCTCACTGTGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp GGGTCCGGTTTGCCAATGGGGAGAGTTCCCTTAAGCCGAGCTAGCCCTACAGGTCCACAGAAGGTCCTCTaGTGGCAGCTTGGGAGAATT +
Preference number: 4 (lower is better)
Translates to: GSGLPMGRVPLSRASPTGPQKVL*WQLGRI
Trigger: AATTCTCCCAAGCTGCCATCAGAGGACCTTCTGTGG...ACCTGTAGGGCTAGCTCGGCTTAAGGGAACTCTCCCCATTGGCAAACCGGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp TCAACAGAAGAGCAGGATAGAAAGAGCCATCTGGGAGTGGCGTCTTCAGCCCCTGGCGTACGAACGGTGTaGGTGACTCTGCAGAGTCGC +
Preference number: 4 (lower is better)
Translates to: STEEQDRKSHLGVASSAPGVRTV*VTLQSR
Trigger: GCGACTCTGCAGAGTCACTCACACCGTTCGTACGCC...AGGGGCTGAAGACGCCACTCCCAGATGGCTCTTTCTATCCTGCTCTTCTGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp TCCCACAGCCAAGCACAAGATCTAGGCCTGTGGGCACCAACAGGATGGGGCTCTCCAGAAGAGTTAGTGTaGTCCCCAGACAAGGCACCA +
Preference number: 4 (lower is better)
Translates to: SHSQAQDLGLWAPTGWGSPEELV*SPDKAP
Trigger: TGGTGCCTTGTCTGGGGAGCACACTAACTCTTCTGG...AGAGCCCCATCCTGTTGGTGCCCACAGGCCTAGATCTTGTGCTTGGCTGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp ATTCACAGTGAGGCCTCACCTGTCCTGGGATCGCAGGCACACACAGCTCCCCACAAAAATCCGCTTGCCTaGCTCATCAGCCTCATCCAG +
Preference number: 4 (lower is better)
Translates to: IHSEASPVLGSQAHTAPHKNPLA*LISLIQ
Trigger: CTGGATGAGGCTGATGAGGCAGGCAAGCGGATTTTT...GTGGGGAGCTGTGTGTGCCTGCGATCCCAGGACAGGTGAGGCCTCACTGTGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp CAAGGCCAGGACCCATCTCCGCCAGAATACAGAACAAAGGAGCCTGCGCGGTCCGACCAAAAATCCGCTTaGCTGCCTCATCAGCCTCAT +
Preference number: 4 (lower is better)
Translates to: QGQDPSPPEYRTKEPARSDQKSA*LPHQPH
Trigger: ATGAGGCTGATGAGGCAGGCAAGCGGATTTTTGGTC...GGACCGCGCAGGCTCCTTTGTTCTGTATTCTGGCGGAGATGGGTCCTGGCCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp TCCCAGAAAGATCCCATCCTTCCGGACAGGACCCCAGCTGGTGAGCCCTGGCCTGCTTGGCGTTCTCAATaGTCTTCTTACAGGCTTCGA +
Preference number: 4 (lower is better)
Translates to: SQKDPILPDRTPAGEPWPAWRSQ*SSYRLR
Trigger: TCGAAGCCTGTAAGAAGAGCATTGAGAACGCCAAGC...AGGCCAGGGCTCACCAGCTGGGGTCCTGTCCGGAAGGATGGGATCTTTCTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp GCGGCCCACAGACAGCCAAGGAGACCCGGGGTCTGTGGCGCCGCTTTCCCATCTAAGGCAGGCGATGTCTaGATTTTCTGTAACATAAAC +
Preference number: 4 (lower is better)
Translates to: AAHRQPRRPGVCGAAFPSKAGDV*IFCNIN
Trigger: GTTTATGTTACAGAAAATGCAGACATCGCCTGCCTT...AGATGGGAAAGCGGCGCCACAGACCCCGGGTCTCCTTGGCTGTCTGTGGGCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp CTCACCCATCAGCTGCTGCAAACTTGCCTGATCAGTCGTGAACCCCACTTGAGGGGACCTGATCCAGCTTaGTGTCCTGCACCGCCTTCA +
Preference number: 4 (lower is better)
Translates to: LTHQLLQTCLISREPHLRGPDPA*CPAPPS
Trigger: TGAAGGCGGTGCAGGACAGCAAGCTGGATCAGGTCC...CCTCAAGTGGGGTTCACGACTGATCAGGCAAGTTTGCAGCAGCTGATGGGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp CAAGGCCAGGACCCATCTCCGCCAGAATACAGAACAAAGGAGCCTGCGCGGTCCATTGCCTCCAAGCGCTaGCTGAAATTCCTTGCCAGA +
Preference number: 4 (lower is better)
Translates to: QGQDPSPPEYRTKEPARSIASKR*LKFLAR
Trigger: TCTGGCAAGGAATTTCAGGCAGCGCTTGGAGGCAAT...GGACCGCGCAGGCTCCTTTGTTCTGTATTCTGGCGGAGATGGGTCCTGGCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp GGAGTGGAAAGTGGTAACTCGGGTTGTGAATGCCCGTTAGATTCCAAGGCTGGACAGGGAAGCCCACGATaGGGTCCCGAGCTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: GVESGNSGCECPLDSKAGQGSPR*GPELLS
Trigger: GGAGAGAAGCTCGGGACCGCATCGTGGGCTTCCCTG...TCCAGCCTTGGAATCTAACGGGCATTCACAACCCGAGTTACCACTTTCCACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp CTCACCCATCAGCTGCTGCAAACTTGCCTGATCAGTCGTGAACCCCACTTGAGGGTGTTCTTGAGAGGCTaGAGTCCGGTGTGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: LTHQLLQTCLISREPHLRVFLRG*SPVWEA
Trigger: TGCCTCCCACACCGGACTGCAGCCTCTCAAGAACAC...CCTCAAGTGGGGTTCACGACTGATCAGGCAAGTTTGCAGCAGCTGATGGGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp ACAGGCAGGTCAGAGGAGAACGTATTCCAAGAAATAGAAGCACAGGATGCCAAGTCCCAGAAGCCGTTCTaGCTGCCGGCCGCCCGCCTT +
Preference number: 4 (lower is better)
Translates to: TGRSEENVFQEIEAQDAKSQKPF*LPAARL
Trigger: AAGGCGGGCGGCCGGCAGCCAGAACGGCTTCTGGGA...CTTGGCATCCTGTGCTTCTATTTCTTGGAATACGTTCTCCTCTGACCTGCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp GGACCCATCTCCGCCAGAATACAGAACAAAGGAGCCTGCGCGGTCCCTCCCTTAGGAGCAGGTCCTGCTTaGCGTTCTCAATGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: GPISARIQNKGACAVPPLGAGPA*RSQCSS
Trigger: AGAAGAGCATTGAGAACGCCAAGCAGGACCTGCTCC...TAAGGGAGGGACCGCGCAGGCTCCTTTGTTCTGTATTCTGGCGGAGATGGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp AGGAGTAGTTGGAGTTGTAGAGCCAGGACTGATGGGGGATGTCCCATGCGTGGTCCACCATGTCCCGGATaGCCTGGGGCATCACATAAG +
Preference number: 4 (lower is better)
Translates to: RSSWSCRARTDGGCPMRGPPCPG*PGASHK
Trigger: CTTATGTGATGCCCCAGGCCATCCGGGACATGGTGG...ACCACGCATGGGACATCCCCCATCAGTCCTGGCTCTACAACTCCAACTACTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522698.1
CDS-3UTR CCA 90 bp GGCCTGGTCAGGCTGCCTCCCATCGTCTTCTGCGAGCAGGCCCAGCTGGCATACCAAACAAGAGAGAAATaGGAGAGCAGGGATAAGTAC +
Preference number: 4 (lower is better)
Translates to: GLVRLPPIVFCEQAQLAYQTREK*ESRDKY
Trigger: GTACTTATCCCTGCTCTCCCATTTCTCTCTTGTTTG...GTATGCCAGCTGGGCCTGCTCGCAGAAGACGATGGGAGGCAGCCTGACCAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp ACTGGCTTAAGGCATGTGCATGACCAGGACAAACCTGAGCTTTTGTTCAGTTGCCGAGCCAGGACAAGGTaGCCAGGGGCGGCCCACAGA +
Preference number: 4 (lower is better)
Translates to: TGLRHVHDQDKPELLFSCRARTR*PGAAHR
Trigger: TCTGTGGGCCGCCCCTGGCCACCTTGTCCTGGCTCG...GCAACTGAACAAAAGCTCAGGTTTGTCCTGGTCATGCACATGCCTTAAGCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp GCCCACAGCACGTGTGTTTCAACAGAAGAGCAGGATAGAAAGAGCCATCTGGGACCAGCTGGTGAGCCCTaGCCTGAGGCACAGTCCACA +
Preference number: 4 (lower is better)
Translates to: AHSTCVSTEEQDRKSHLGPAGEP*PEAQST
Trigger: TGTGGACTGTGCCTCAGGCCAGGGCTCACCAGCTGG...TCCCAGATGGCTCTTTCTATCCTGCTCTTCTGTTGAAACACACGTGCTGTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp GGACCCATCTCCGCCAGAATACAGAACAAAGGAGCCTGCGCGGTCCCTCCCTTAGCTGGCATACACAGGTaGCGACCTGGAATCAAGCAA +
Preference number: 4 (lower is better)
Translates to: GPISARIQNKGACAVPPLAGIHR*RPGIKQ
Trigger: TTGCTTGATTCCAGGTCGCCACCTGTGTATGCCAGC...TAAGGGAGGGACCGCGCAGGCTCCTTTGTTCTGTATTCTGGCGGAGATGGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp CTCACCCATCAGCTGCTGCAAACTTGCCTGATCAGTCGTGAACCCCACTTGAGGCAAGATCTAGGCCTGTaGGCACCAACAGGATGGGGC +
Preference number: 4 (lower is better)
Translates to: LTHQLLQTCLISREPHLRQDLGL*APTGWG
Trigger: GCCCCATCCTGTTGGTGCCCACAGGCCTAGATCTTG...CCTCAAGTGGGGTTCACGACTGATCAGGCAAGTTTGCAGCAGCTGATGGGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp TCCCAGAAAGATCCCATCCTTCCGGACAGGACCCCAGCTGGTGAGCCCTGGCCTCTTCTCAAGTCTCTCTaGTCCCAGGACAATCGTAAC +
Preference number: 4 (lower is better)
Translates to: SQKDPILPDRTPAGEPWPLLKSL*SQDNRN
Trigger: GTTACGATTGTCCTGGGACCAGAGAGACTTGAGAAG...AGGCCAGGGCTCACCAGCTGGGGTCCTGTCCGGAAGGATGGGATCTTTCTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp GGGTCCGGTTTGCCAATGGGGAGAGTTCCCTTAAGCCGAGCTAGCCCTACAGGTGGGGTTTCGCCATTTTaGCCAGGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: GSGLPMGRVPLSRASPTGGVSPF*PGWSQT
Trigger: AGTTTGAGACCAGCCTGGCCAAAATGGCGAAACCCC...ACCTGTAGGGCTAGCTCGGCTTAAGGGAACTCTCCCCATTGGCAAACCGGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp GGGTCTGTGGCGCCGCTTTCCCATCTCAAGCGAGTCACAGGTCGGCGGCTTTCCAATGCCAGCTTCTTATaGTGCCTTTGCCAACAATCA +
Preference number: 4 (lower is better)
Translates to: GSVAPLSHLKRVTGRRLSNASFL*CLCQQS
Trigger: TGATTGTTGGCAAAGGCATCATAAGAAGCTGGCATT...GGAAAGCCGCCGACCTGTGACTCGCTTGAGATGGGAAAGCGGCGCCACAGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp TCCCACAGCCAAGCACAAGATCTAGGCCTGTGGGCACCAACAGGATGGGGCTCTGTGCCACATTCTTGCTaGGATGAAAGGGAGGAGGTA +
Preference number: 4 (lower is better)
Translates to: SHSQAQDLGLWAPTGWGSVPHSC*DEREEV
Trigger: TACCTCCTCCCTTTCATCTCAGCAAGAATGTGGCAC...AGAGCCCCATCCTGTTGGTGCCCACAGGCCTAGATCTTGTGCTTGGCTGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp GGAGTGGAAAGTGGTAACTCGGGTTGTGAATGCCCGTTAGATTCCAAGGCTGGAAAGGAGCGGGCCTCCTaGAGGCTAGACCTCAGAGAC +
Preference number: 4 (lower is better)
Translates to: GVESGNSGCECPLDSKAGKERAS*RLDLRD
Trigger: GTCTCTGAGGTCTAGCCTTCAGGAGGCCCGCTCCTT...TCCAGCCTTGGAATCTAACGGGCATTCACAACCCGAGTTACCACTTTCCACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp GGGTCCGGTTTGCCAATGGGGAGAGTTCCCTTAAGCCGAGCTAGCCCTACAGGTGCTGGTTTTTGCAGGTaGATTCCACCAGGACCTGAT +
Preference number: 4 (lower is better)
Translates to: GSGLPMGRVPLSRASPTGAGFCR*IPPGPD
Trigger: ATCAGGTCCTGGTGGAATTCACCTGCAAAAACCAGC...ACCTGTAGGGCTAGCTCGGCTTAAGGGAACTCTCCCCATTGGCAAACCGGACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp ACTGGCTTAAGGCATGTGCATGACCAGGACAAACCTGAGCTTTTGTTCAGTTGCTCCAGCCGCCTTGCCTaGACGGTGGGGGATCTCAGC +
Preference number: 4 (lower is better)
Translates to: TGLRHVHDQDKPELLFSCSSRLA*TVGDLS
Trigger: GCTGAGATCCCCCACCGTTCAGGCAAGGCGGCTGGA...GCAACTGAACAAAAGCTCAGGTTTGTCCTGGTCATGCACATGCCTTAAGCCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp AGGAGTAGTTGGAGTTGTAGAGCCAGGACTGATGGGGGATGTCCCATGCGTGGTTCGTCATGGCGGAGGTaGGCATCGTCATCAATGGAC +
Preference number: 4 (lower is better)
Translates to: RSSWSCRARTDGGCPMRGSSWRR*ASSSMD
Trigger: GTCCATTGATGACGATGCTCACCTCCGCCATGACGA...ACCACGCATGGGACATCCCCCATCAGTCCTGGCTCTACAACTCCAACTACTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522698.1
CDS-3UTR TCA 90 bp TCAACAGAAGAGCAGGATAGAAAGAGCCATCTGGGAGTGGCGTCTTCAGCCCCTCACTTCAGAAACGCCTaGGGCCCACAGCACGTGTGT +
Preference number: 4 (lower is better)
Translates to: STEEQDRKSHLGVASSAPHFRNA*GPQHVC
Trigger: ACACACGTGCTGTGGGCCTCAGGCGTTTCTGAAGTG...AGGGGCTGAAGACGCCACTCCCAGATGGCTCTTTCTATCCTGCTCTTCTGTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp GGAGTGGAAAGTGGTAACTCGGGTTGTGAATGCCCGTTAGATTCCAAGGCTGGAGGCTCTAATAGGAGGTaGGCAGGGCACTCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: GVESGNSGCECPLDSKAGGSNRR*AGHSAR
Trigger: CCTGGCTGAGTGCCCTGCTCACCTCCTATTAGAGCC...TCCAGCCTTGGAATCTAACGGGCATTCACAACCCGAGTTACCACTTTCCACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp CCAGCAGAGGCTCTGGGCCACCCACCAGCAGATGTGCCCAAGGTCCTGCAATGCGCCATAACCATGGGTTaGTATTCCACAAAACGATCT +
Preference number: 4 (lower is better)
Translates to: PAEALGHPPADVPKVLQCAITMG*YSTKRS
Trigger: AGATCGTTTTGTGGAATAGCAACCCATGGTTATGGC...GCATTGCAGGACCTTGGGCACATCTGCTGGTGGGTGGCCCAGAGCCTCTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp TTCGTCATGGCGGAGGTGAGCATCGTCATCAATGGACAGGATGGCCTCTGTCTCAGCACCACCGGCTCCTaGATCTCTCCCACTAGTATC +
Preference number: 4 (lower is better)
Translates to: FVMAEVSIVINGQDGLCLSTTGS*ISPTSI
Trigger: GATACTAGTGGGAGAGATGCAGGAGCCGGTGGTGCT...GAGACAGAGGCCATCCTGTCCATTGATGACGATGCTCACCTCCGCCATGACGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522698.1
CDS-3UTR GCA 90 bp ACTGGCTTAAGGCATGTGCATGACCAGGACAAACCTGAGCTTTTGTTCAGTTGCGTGGGGGATCTCAGCTaGCGCCTCTTCCCGGATGGG +
Preference number: 4 (lower is better)
Translates to: TGLRHVHDQDKPELLFSCVGDLS*RLFPDG
Trigger: CCCATCCGGGAAGAGGCGGCAGCTGAGATCCCCCAC...GCAACTGAACAAAAGCTCAGGTTTGTCCTGGTCATGCACATGCCTTAAGCCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp ACTGGCTTAAGGCATGTGCATGACCAGGACAAACCTGAGCTTTTGTTCAGTTGCCTGTGGCCACCTTGCTaGCTCTCGCTGAGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: TGLRHVHDQDKPELLFSCLWPPC*LSLRRA
Trigger: CGCCCTCCTCAGCGAGAGGCAGCAAGGTGGCCACAG...GCAACTGAACAAAAGCTCAGGTTTGTCCTGGTCATGCACATGCCTTAAGCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp CAAGGCCAGGACCCATCTCCGCCAGAATACAGAACAAAGGAGCCTGCGCGGTCCCATATATGGGCCACATaGCCTTCCACATCCTGCTTA +
Preference number: 4 (lower is better)
Translates to: QGQDPSPPEYRTKEPARSHIWAT*PSTSCL
Trigger: TAAGCAGGATGTGGAAGGGCATGTGGCCCATATATG...GGACCGCGCAGGCTCCTTTGTTCTGTATTCTGGCGGAGATGGGTCCTGGCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp ACAGAAAGGGTAAGGAAGAGACCTTGTCCAGGCCCGCAAGAGGGCCAAGTTCATGGAGCGTCAGCTCGGTaGAGGTACAGGTGCCTTAGT +
Preference number: 4 (lower is better)
Translates to: TERVRKRPCPGPQEGQVHGASAR*RYRCLS
Trigger: ACTAAGGCACCTGTACCTGCACCGAGCTGACGCTCC...ATGAACTTGGCCCTCTTGCGGGCCTGGACAAGGTCTCTTCCTTACCCTTTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp GGGTCCGGTTTGCCAATGGGGAGAGTTCCCTTAAGCCGAGCTAGCCCTACAGGTAGACCCAAAGAGGAATaGCCCTCGATGACATCTCAC +
Preference number: 4 (lower is better)
Translates to: GSGLPMGRVPLSRASPTGRPKEE*PSMTSH
Trigger: GTGAGATGTCATCGAGGGGCATTCCTCTTTGGGTCT...ACCTGTAGGGCTAGCTCGGCTTAAGGGAACTCTCCCCATTGGCAAACCGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp GGGTCCGGTTTGCCAATGGGGAGAGTTCCCTTAAGCCGAGCTAGCCCTACAGGTCAGCTGCAGCTGAAATaGTCTCTGACCCTATTCCAG +
Preference number: 4 (lower is better)
Translates to: GSGLPMGRVPLSRASPTGQLQLK*SLTLFQ
Trigger: CTGGAATAGGGTCAGAGACCATTTCAGCTGCAGCTG...ACCTGTAGGGCTAGCTCGGCTTAAGGGAACTCTCCCCATTGGCAAACCGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp CACACACCACACTCTTTGGCTCCCCGAGGGAAGAAGGCTACTGCTAAAAGGAATGGCATCGTCCTTCTCTaGGAGCAGTCGGATGGGCAG +
Preference number: 4 (lower is better)
Translates to: HTPHSLAPRGKKATAKRNGIVLL*EQSDGQ
Trigger: CTGCCCATCCGACTGCTCCCAGAGAAGGACGATGCC...ATTCCTTTTAGCAGTAGCCTTCTTCCCTCGGGGAGCCAAAGAGTGTGGTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp CTCACCCATCAGCTGCTGCAAACTTGCCTGATCAGTCGTGAACCCCACTTGAGGCACCGGCACCTGTGGTaGGATTTCCATGAAGTTGGG +
Preference number: 4 (lower is better)
Translates to: LTHQLLQTCLISREPHLRHRHLW*DFHEVG
Trigger: CCCAACTTCATGGAAATCCCACCACAGGTGCCGGTG...CCTCAAGTGGGGTTCACGACTGATCAGGCAAGTTTGCAGCAGCTGATGGGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp ACTGGCTTAAGGCATGTGCATGACCAGGACAAACCTGAGCTTTTGTTCAGTTGCCCGCCTCTTCCCGGATaGGAGCGGCTGGGATCTGGA +
Preference number: 4 (lower is better)
Translates to: TGLRHVHDQDKPELLFSCPPLPG*ERLGSG
Trigger: TCCAGATCCCAGCCGCTCCCATCCGGGAAGAGGCGG...GCAACTGAACAAAAGCTCAGGTTTGTCCTGGTCATGCACATGCCTTAAGCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp AGTTGTAGAGCCAGGACTGATGGGGGATGTCCCATGCGTGGTAACGGCCAGGGAGAGCATCGTCATCAATaGACAGGATGGCCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: SCRARTDGGCPMRGNGQGEHRHQ*TGWPLS
Trigger: AGACAGAGGCCATCCTGTCCATTGATGACGATGCTC...TCCCTGGCCGTTACCACGCATGGGACATCCCCCATCAGTCCTGGCTCTACAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522698.1
CDS-3UTR CCA 90 bp CACACACCACACTCTTTGGCTCCCCGAGGGAAGAAGGCTACTGCTAAAAGGAATTTCCAGCAGAGGCTCTaGGCCACCCACCAGCAGATG +
Preference number: 4 (lower is better)
Translates to: HTPHSLAPRGKKATAKRNFQQRL*ATHQQM
Trigger: CATCTGCTGGTGGGTGGCCCAGAGCCTCTGCTGGAA...ATTCCTTTTAGCAGTAGCCTTCTTCCCTCGGGGAGCCAAAGAGTGTGGTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp GGGTCCGGTTTGCCAATGGGGAGAGTTCCCTTAAGCCGAGCTAGCCCTACAGGTTGGCGCTGGGGAGGATaGGAGATGATCTTTAAGGAT +
Preference number: 4 (lower is better)
Translates to: GSGLPMGRVPLSRASPTGWRWGG*EMIFKD
Trigger: ATCCTTAAAGATCATCTCCCATCCTCCCCAGCGCCA...ACCTGTAGGGCTAGCTCGGCTTAAGGGAACTCTCCCCATTGGCAAACCGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp AAGGATAAGCCAGTGACACAAGGCCAGGACCCATCTCCGCCAGAATACAGAACAGTTGCTGCACACAGATaGCGCTGGGGAGGATGGGAG +
Preference number: 4 (lower is better)
Translates to: KDKPVTQGQDPSPPEYRTVAAHR*RWGGWE
Trigger: CTCCCATCCTCCCCAGCGCCATCTGTGTGCAGCAAC...TGTTCTGTATTCTGGCGGAGATGGGTCCTGGCCTTGTGTCACTGGCTTATCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp GGGTCCGGTTTGCCAATGGGGAGAGTTCCCTTAAGCCGAGCTAGCCCTACAGGTACACAGGTGGCGACCTaGAATCAAGCAATCAAGCAG +
Preference number: 4 (lower is better)
Translates to: GSGLPMGRVPLSRASPTGTQVAT*NQAIKQ
Trigger: CTGCTTGATTGCTTGATTCCAGGTCGCCACCTGTGT...ACCTGTAGGGCTAGCTCGGCTTAAGGGAACTCTCCCCATTGGCAAACCGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp AAGGATAAGCCAGTGACACAAGGCCAGGACCCATCTCCGCCAGAATACAGAACAAGGCCTCACCTGTCCTaGGATCGCAGGCACACACAG +
Preference number: 4 (lower is better)
Translates to: KDKPVTQGQDPSPPEYRTRPHLS*DRRHTQ
Trigger: CTGTGTGTGCCTGCGATCCCAGGACAGGTGAGGCCT...TGTTCTGTATTCTGGCGGAGATGGGTCCTGGCCTTGTGTCACTGGCTTATCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp CAAGGCCAGGACCCATCTCCGCCAGAATACAGAACAAAGGAGCCTGCGCGGTCCATGGAGATGGATGGCTaGAAGAACAGGAGCTTGACA +
Preference number: 4 (lower is better)
Translates to: QGQDPSPPEYRTKEPARSMEMDG*KNRSLT
Trigger: TGTCAAGCTCCTGTTCTTCCAGCCATCCATCTCCAT...GGACCGCGCAGGCTCCTTTGTTCTGTATTCTGGCGGAGATGGGTCCTGGCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp CACACACCACACTCTTTGGCTCCCCGAGGGAAGAAGGCTACTGCTAAAAGGAATGCTCGTGCTGTCGCCTaGAAAGCCTGCTTGACCAAG +
Preference number: 4 (lower is better)
Translates to: HTPHSLAPRGKKATAKRNARAVA*KACLTK
Trigger: CTTGGTCAAGCAGGCTTTTCAGGCGACAGCACGAGC...ATTCCTTTTAGCAGTAGCCTTCTTCCCTCGGGGAGCCAAAGAGTGTGGTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp GACCGTAAGTCCAAGACACAACTCGACAGGTATAGACTCAAAGCAGACATCATAGCGGAGGTATCTGGGTaGGGCGTAGGGCGGCTCCGT +
Preference number: 4 (lower is better)
Translates to: DRKSKTQLDRYRLKADIIAEVSG*GVGRLR
Trigger: ACGGAGCCGCCCTACGCCTCACCCAGATACCTCCGC...TATGATGTCTGCTTTGAGTCTATACCTGTCGAGTTGTGTCTTGGACTTACGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp CACACACCACACTCTTTGGCTCCCCGAGGGAAGAAGGCTACTGCTAAAAGGAATCCTCCAAGCGCTGCCTaGAATTCCTTGCCAGAACCC +
Preference number: 4 (lower is better)
Translates to: HTPHSLAPRGKKATAKRNPPSAA*NSLPEP
Trigger: GGGTTCTGGCAAGGAATTTCAGGCAGCGCTTGGAGG...ATTCCTTTTAGCAGTAGCCTTCTTCCCTCGGGGAGCCAAAGAGTGTGGTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp CATCCACCATGTCCCGGATGGCCTGGGGCATCACATAAGAATACAGGTAGGCATCCCGGAACCCAAACATaGTTTCGTCATGGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: HPPCPGWPGASHKNTGRHPGTQT*FRHGGG
Trigger: ACCTCCGCCATGACGAAATCATGTTTGGGTTCCGGG...ATGCCTACCTGTATTCTTATGTGATGCCCCAGGCCATCCGGGACATGGTGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522698.1
CDS-3UTR TCA 90 bp TCAACAGAAGAGCAGGATAGAAAGAGCCATCTGGGAGTGGCGTCTTCAGCCCCTCTAGGGAGAGGAGGCTaGCCTGCAAACCACTTCAGA +
Preference number: 4 (lower is better)
Translates to: STEEQDRKSHLGVASSAPLGRGG*PANHFR
Trigger: TCTGAAGTGGTTTGCAGGTCAGCCTCCTCTCCCTAG...AGGGGCTGAAGACGCCACTCCCAGATGGCTCTTTCTATCCTGCTCTTCTGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp CTCACCCATCAGCTGCTGCAAACTTGCCTGATCAGTCGTGAACCCCACTTGAGGATCACCACCGTGAACTaGTCTCGGGGAACATTGCCT +
Preference number: 4 (lower is better)
Translates to: LTHQLLQTCLISREPHLRITTVN*SRGTLP
Trigger: AGGCAATGTTCCCCGAGAGCAGTTCACGGTGGTGAT...CCTCAAGTGGGGTTCACGACTGATCAGGCAAGTTTGCAGCAGCTGATGGGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp GGAGTGGAAAGTGGTAACTCGGGTTGTGAATGCCCGTTAGATTCCAAGGCTGGACCCAAGGTCCTGCAATaGCTAGGAACCTTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: GVESGNSGCECPLDSKAGPKVLQ*LGTLGA
Trigger: GGCTCCCAAGGTTCCTAGGCATTGCAGGACCTTGGG...TCCAGCCTTGGAATCTAACGGGCATTCACAACCCGAGTTACCACTTTCCACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp TCCCACAGCCAAGCACAAGATCTAGGCCTGTGGGCACCAACAGGATGGGGCTCTAATAGAAGCACAGGATaGCAAGGTCTAGGGAAGACG +
Preference number: 4 (lower is better)
Translates to: SHSQAQDLGLWAPTGWGSNRSTG*QGLGKT
Trigger: CGTCTTCCCTAGACCTTGGCATCCTGTGCTTCTATT...AGAGCCCCATCCTGTTGGTGCCCACAGGCCTAGATCTTGTGCTTGGCTGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp ACTGGCTTAAGGCATGTGCATGACCAGGACAAACCTGAGCTTTTGTTCAGTTGCCCTCCCATCGTCTTCTaGGAGCAGGCCCAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: TGLRHVHDQDKPELLFSCPPIVF*EQAQLA
Trigger: TGCCAGCTGGGCCTGCTCGCAGAAGACGATGGGAGG...GCAACTGAACAAAAGCTCAGGTTTGTCCTGGTCATGCACATGCCTTAAGCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp CTCACCCATCAGCTGCTGCAAACTTGCCTGATCAGTCGTGAACCCCACTTGAGGATCCGTCCGCCAGTGTaGCAGGGAATACAACTGCTT +
Preference number: 4 (lower is better)
Translates to: LTHQLLQTCLISREPHLRIRPPV*QGIQLL
Trigger: AAGCAGTTGTATTCCCTGCCACACTGGCGGACGGAT...CCTCAAGTGGGGTTCACGACTGATCAGGCAAGTTTGCAGCAGCTGATGGGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp AGTTGTAGAGCCAGGACTGATGGGGGATGTCCCATGCGTGGTAACGGCCAGGGAAGATTGATGATGACATaGTTGTGTCCATCCGTCCGC +
Preference number: 4 (lower is better)
Translates to: SCRARTDGGCPMRGNGQGRLMMT*LCPSVR
Trigger: GCGGACGGATGGACACAACCATGTCATCATCAATCT...TCCCTGGCCGTTACCACGCATGGGACATCCCCCATCAGTCCTGGCTCTACAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522698.1
CDS-3UTR CCA 90 bp AAGGATAAGCCAGTGACACAAGGCCAGGACCCATCTCCGCCAGAATACAGAACAGGACAGTGTAGAAGGTaGACTGGGCCACCATGGCAC +
Preference number: 4 (lower is better)
Translates to: KDKPVTQGQDPSPPEYRTGQCRR*TGPPWH
Trigger: GTGCCATGGTGGCCCAGTCCACCTTCTACACTGTCC...TGTTCTGTATTCTGGCGGAGATGGGTCCTGGCCTTGTGTCACTGGCTTATCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp CACACACCACACTCTTTGGCTCCCCGAGGGAAGAAGGCTACTGCTAAAAGGAATGGCTCAGACATGGCATaGACCAGCGGTGATACGACC +
Preference number: 4 (lower is better)
Translates to: HTPHSLAPRGKKATAKRNGSDMA*TSGDTT
Trigger: GGTCGTATCACCGCTGGTCCATGCCATGTCTGAGCC...ATTCCTTTTAGCAGTAGCCTTCTTCCCTCGGGGAGCCAAAGAGTGTGGTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp CACACACCACACTCTTTGGCTCCCCGAGGGAAGAAGGCTACTGCTAAAAGGAATCCACCATGTCCCGGATaGCCTGGGGCATCACATAAG +
Preference number: 4 (lower is better)
Translates to: HTPHSLAPRGKKATAKRNPPCPG*PGASHK
Trigger: CTTATGTGATGCCCCAGGCCATCCGGGACATGGTGG...ATTCCTTTTAGCAGTAGCCTTCTTCCCTCGGGGAGCCAAAGAGTGTGGTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp TCAACAGAAGAGCAGGATAGAAAGAGCCATCTGGGAGTGGCGTCTTCAGCCCCTCAAAATGACTTGCCCTaGAACCGGGCACAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: STEEQDRKSHLGVASSAPQNDLP*NRAQAR
Trigger: CCTTGCCTGTGCCCGGTTCCAGGGCAAGTCATTTTG...AGGGGCTGAAGACGCCACTCCCAGATGGCTCTTTCTATCCTGCTCTTCTGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
3UTR CAA 72 bp TTGCTGACTGGCAACAGAAAGGGTAAGGAAGAGACCTaGTCCAGGCCCGCAAGAGGGCCAAGTTCATCCCTT +
Preference number: 4 (lower is better)
Translates to: LLTGNRKGKEET*SRPARGPSSSL
Trigger: AAGGGATGAACTTGGCCCTCTTGCGGGCCTGGACAAGGTCTCTTCCTTACCCTTTCTGTTGCCAGTCAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp GGGTCCGGTTTGCCAATGGGGAGAGTTCCCTTAAGCCGAGCTAGCCCTACAGGTCGATCTCTGTTTCACTaGCACGTTTCCAGAAGAGTT +
Preference number: 4 (lower is better)
Translates to: GSGLPMGRVPLSRASPTGRSLFH*HVSRRV
Trigger: AACTCTTCTGGAAACGTGTCAGTGAAACAGAGATCG...ACCTGTAGGGCTAGCTCGGCTTAAGGGAACTCTCCCCATTGGCAAACCGGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp TCAACAGAAGAGCAGGATAGAAAGAGCCATCTGGGAGTGGCGTCTTCAGCCCCTCTCACCGAGTCCCACTaGAGTCAGTATGTGAGTTCC +
Preference number: 4 (lower is better)
Translates to: STEEQDRKSHLGVASSAPLTESH*SQYVSS
Trigger: GGAACTCACATACTGACTTCAGTGGGACTCGGTGAG...AGGGGCTGAAGACGCCACTCCCAGATGGCTCTTTCTATCCTGCTCTTCTGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp GGGAAGCCCACGATGCGGTCCCGAGCTTCTCTCCACACCCGGAACCCAAACATGAAGGCAGGCGATGTCTaGATTTTCTGTAACATAAAC +
Preference number: 4 (lower is better)
Translates to: GKPTMRSRASLHTRNPNMKAGDV*IFCNIN
Trigger: GTTTATGTTACAGAAAATGCAGACATCGCCTGCCTT...CATGTTTGGGTTCCGGGTGTGGAGAGAAGCTCGGGACCGCATCGTGGGCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522698.1
CDS-3UTR GCA 90 bp GCCCACAGCACGTGTGTTTCAACAGAAGAGCAGGATAGAAAGAGCCATCTGGGAAGCACCACCGGCTCCTaGATCTCTCCCACTAGTATC +
Preference number: 4 (lower is better)
Translates to: AHSTCVSTEEQDRKSHLGSTTGS*ISPTSI
Trigger: GATACTAGTGGGAGAGATGCAGGAGCCGGTGGTGCT...TCCCAGATGGCTCTTTCTATCCTGCTCTTCTGTTGAAACACACGTGCTGTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp AAGGATAAGCCAGTGACACAAGGCCAGGACCCATCTCCGCCAGAATACAGAACAGAATCCACCCTGAACTaGGTGTACAGGAGGGGCATG +
Preference number: 4 (lower is better)
Translates to: KDKPVTQGQDPSPPEYRTESTLN*VYRRGM
Trigger: CATGCCCCTCCTGTACACGCAGTTCAGGGTGGATTC...TGTTCTGTATTCTGGCGGAGATGGGTCCTGGCCTTGTGTCACTGGCTTATCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp AAGGATAAGCCAGTGACACAAGGCCAGGACCCATCTCCGCCAGAATACAGAACACAGAACAAAGGAGCCTaGGCGGTCCCTCCCTTAGAA +
Preference number: 4 (lower is better)
Translates to: KDKPVTQGQDPSPPEYRTQNKGA*AVPPLE
Trigger: TTCTAAGGGAGGGACCGCGCAGGCTCCTTTGTTCTG...TGTTCTGTATTCTGGCGGAGATGGGTCCTGGCCTTGTGTCACTGGCTTATCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp CATCCACCATGTCCCGGATGGCCTGGGGCATCACATAAGAATACAGGTAGGCATATCCGTCCGCCAGTGTaGCAGGGAATACAACTGCTT +
Preference number: 4 (lower is better)
Translates to: HPPCPGWPGASHKNTGRHIRPPV*QGIQLL
Trigger: AAGCAGTTGTATTCCCTGCCACACTGGCGGACGGAT...ATGCCTACCTGTATTCTTATGTGATGCCCCAGGCCATCCGGGACATGGTGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522698.1
CDS-3UTR CCA 90 bp GGAGTGGAAAGTGGTAACTCGGGTTGTGAATGCCCGTTAGATTCCAAGGCTGGAAAGATGGAAAGGCCCTaGAGCACAGTTCCAGCTGCG +
Preference number: 4 (lower is better)
Translates to: GVESGNSGCECPLDSKAGKMERP*STVPAA
Trigger: CGCAGCTGGAACTGTGCTCCAGGGCCTTTCCATCTT...TCCAGCCTTGGAATCTAACGGGCATTCACAACCCGAGTTACCACTTTCCACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp GGAGTTGTAGAGCCAGGACTGATGGGGGATGTCCCATGCGTGGTAACGGCCAGGCATCAATGGACAGGATaGCCTCTGTCTCAATTTCAT +
Preference number: 4 (lower is better)
Translates to: GVVEPGLMGDVPCVVTARHQWTG*PLSQFH
Trigger: ATGAAATTGAGACAGAGGCCATCCTGTCCATTGATG...CCTGGCCGTTACCACGCATGGGACATCCCCCATCAGTCCTGGCTCTACAACTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522698.1
CDS-3UTR CCA 90 bp TCAACAGAAGAGCAGGATAGAAAGAGCCATCTGGGAGTGGCGTCTTCAGCCCCTATAGAAAGAGCCATCTaGGAGTGGCGTCTTCAGCCC +
Preference number: 4 (lower is better)
Translates to: STEEQDRKSHLGVASSAPIERAI*EWRLQP
Trigger: GGGCTGAAGACGCCACTCCCAGATGGCTCTTTCTAT...AGGGGCTGAAGACGCCACTCCCAGATGGCTCTTTCTATCCTGCTCTTCTGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp GCTCACCGAGTCCCACTGAAGTCAGTATGTGAGTTCCTCACATTAAAAGAAACCGAGACCCGGGGTCTGTaGCGCCGCTTTCCCATCTCA +
Preference number: 4 (lower is better)
Translates to: AHRVPLKSVCEFLTLKETETRGL*RRFPIS
Trigger: TGAGATGGGAAAGCGGCGCCACAGACCCCGGGTCTC...GGTTTCTTTTAATGTGAGGAACTCACATACTGACTTCAGTGGGACTCGGTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp GGACCCATCTCCGCCAGAATACAGAACAAAGGAGCCTGCGCGGTCCCTCCCTTAAGGCAGAAAGAGCCATaGAGAAGTGGACACTATTTT +
Preference number: 4 (lower is better)
Translates to: GPISARIQNKGACAVPPLRQKEP*RSGHYF
Trigger: AAAATAGTGTCCACTTCTTCATGGCTCTTTCTGCCT...TAAGGGAGGGACCGCGCAGGCTCCTTTGTTCTGTATTCTGGCGGAGATGGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp ACAGAAAGGGTAAGGAAGAGACCTTGTCCAGGCCCGCAAGAGGGCCAAGTTCATAGGGATCCAGGTAGCTaGCAAAGACAAACTGGTCAC +
Preference number: 4 (lower is better)
Translates to: TERVRKRPCPGPQEGQVHRDPGS*QRQTGH
Trigger: GTGACCAGTTTGTCTTTGGCAGCTACCTGGATCCCT...ATGAACTTGGCCCTCTTGCGGGCCTGGACAAGGTCTCTTCCTTACCCTTTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp AAACATGATTTCGTCATGGCGGAGGTGAGCATCGTCATCAATGGACAGGATGGCGGCAGGGAATACAACTaGTTCTCCAGCTCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: KHDFVMAEVSIVINGQDGGREYN*FSSSAG
Trigger: GCCTGCTGAGCTGGAGAAGCAGTTGTATTCCCTGCC...GCCATCCTGTCCATTGATGACGATGCTCACCTCCGCCATGACGAAATCATGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522698.1
CDS-3UTR GCA 90 bp GCTCACCGAGTCCCACTGAAGTCAGTATGTGAGTTCCTCACATTAAAAGAAACCCAGAGAAAGCGGCCTTaGCGCCTCATAGCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: AHRVPLKSVCEFLTLKETQRKRP*RLIARR
Trigger: CCTCCTGGCTATGAGGCGGCAAGGCCGCTTTCTCTG...GGTTTCTTTTAATGTGAGGAACTCACATACTGACTTCAGTGGGACTCGGTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp GGAGTGGAAAGTGGTAACTCGGGTTGTGAATGCCCGTTAGATTCCAAGGCTGGAAGACCACAGCAGATGTaGACGCTGCTGATCTCCTGT +
Preference number: 4 (lower is better)
Translates to: GVESGNSGCECPLDSKAGRPQQM*TLLISC
Trigger: ACAGGAGATCAGCAGCGTGCACATCTGCTGTGGTCT...TCCAGCCTTGGAATCTAACGGGCATTCACAACCCGAGTTACCACTTTCCACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp AAATTAACTTTGCATATATGGGCCACATGCCCTTCCACATCCTGCTTAAAGCACCACACGGAGGAGCACTaGCCAGGGAGCCAGCGCTCA +
Preference number: 4 (lower is better)
Translates to: KLTLHIWATCPSTSCLKHHTEEH*PGSQRS
Trigger: TGAGCGCTGGCTCCCTGGGCAGTGCTCCTCCGTGTG...GTGCTTTAAGCAGGATGTGGAAGGGCATGTGGCCCATATATGCAAAGTTAATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp ACTGGCTTAAGGCATGTGCATGACCAGGACAAACCTGAGCTTTTGTTCAGTTGCGGGCACAGGCAAGGCTaGCCATGTGAGTGTGAGTCT +
Preference number: 4 (lower is better)
Translates to: TGLRHVHDQDKPELLFSCGHRQG*PCECES
Trigger: AGACTCACACTCACATGGGCAGCCTTGCCTGTGCCC...GCAACTGAACAAAAGCTCAGGTTTGTCCTGGTCATGCACATGCCTTAAGCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp GCCCACAGCACGTGTGTTTCAACAGAAGAGCAGGATAGAAAGAGCCATCTGGGAAGTTGGGCTCAGACATaGCATGGACCAGCGGTGATA +
Preference number: 4 (lower is better)
Translates to: AHSTCVSTEEQDRKSHLGSWAQT*HGPAVI
Trigger: TATCACCGCTGGTCCATGCCATGTCTGAGCCCAACT...TCCCAGATGGCTCTTTCTATCCTGCTCTTCTGTTGAAACACACGTGCTGTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp TCAACAGAAGAGCAGGATAGAAAGAGCCATCTGGGAGTGGCGTCTTCAGCCCCTAGGCTGGGTTTGGGCTaGTTTTTGCAGGTGAATTCC +
Preference number: 4 (lower is better)
Translates to: STEEQDRKSHLGVASSAPRLGLG*FLQVNS
Trigger: GGAATTCACCTGCAAAAACCAGCCCAAACCCAGCCT...AGGGGCTGAAGACGCCACTCCCAGATGGCTCTTTCTATCCTGCTCTTCTGTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp GGAGTGGAAAGTGGTAACTCGGGTTGTGAATGCCCGTTAGATTCCAAGGCTGGACTGAGCCCAAGAATTTaGCCTCTGAGGGCAACACAG +
Preference number: 4 (lower is better)
Translates to: GVESGNSGCECPLDSKAGLSPRI*PLRATQ
Trigger: CTGTGTTGCCCTCAGAGGCCAAATTCTTGGGCTCAG...TCCAGCCTTGGAATCTAACGGGCATTCACAACCCGAGTTACCACTTTCCACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp ACAGAAAGGGTAAGGAAGAGACCTTGTCCAGGCCCGCAAGAGGGCCAAGTTCATTGGGGTGGATGGACGTaGCATGGATATCAAAGCTTC +
Preference number: 4 (lower is better)
Translates to: TERVRKRPCPGPQEGQVHWGGWT*HGYQSF
Trigger: GAAGCTTTGATATCCATGCCACGTCCATCCACCCCA...ATGAACTTGGCCCTCTTGCGGGCCTGGACAAGGTCTCTTCCTTACCCTTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp CACACACCACACTCTTTGGCTCCCCGAGGGAAGAAGGCTACTGCTAAAAGGAATAAGGGGTGGGGTGGATaGACGTGGCATGGATATCAA +
Preference number: 4 (lower is better)
Translates to: HTPHSLAPRGKKATAKRNKGWGG*TWHGYQ
Trigger: TTGATATCCATGCCACGTCCATCCACCCCACCCCTT...ATTCCTTTTAGCAGTAGCCTTCTTCCCTCGGGGAGCCAAAGAGTGTGGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp TCCCAGAAAGATCCCATCCTTCCGGACAGGACCCCAGCTGGTGAGCCCTGGCCTTTCATGAGAAAACTATaGAACTCCTGTGTTCTTGAG +
Preference number: 4 (lower is better)
Translates to: SQKDPILPDRTPAGEPWPFMRKL*NSCVLE
Trigger: CTCAAGAACACAGGAGTTCCATAGTTTTCTCATGAA...AGGCCAGGGCTCACCAGCTGGGGTCCTGTCCGGAAGGATGGGATCTTTCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp ACAGGCAGGTCAGAGGAGAACGTATTCCAAGAAATAGAAGCACAGGATGCCAAGGGTAATAGTGGGCGATaGGCGGGAAGAAGACCAGGA +
Preference number: 4 (lower is better)
Translates to: TGRSEENVFQEIEAQDAKGNSGR*AGRRPG
Trigger: TCCTGGTCTTCTTCCCGCTCATCGCCCACTATTACC...CTTGGCATCCTGTGCTTCTATTTCTTGGAATACGTTCTCCTCTGACCTGCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp AAGGATAAGCCAGTGACACAAGGCCAGGACCCATCTCCGCCAGAATACAGAACATGGCACGGCCAGTACTaGCGTTATAGAGAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: KDKPVTQGQDPSPPEYRTWHGQY*RYREGS
Trigger: AGAACCTTCTCTATAACGTCAGTACTGGCCGTGCCA...TGTTCTGTATTCTGGCGGAGATGGGTCCTGGCCTTGTGTCACTGGCTTATCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp ACCAGGACAAACCTGAGCTTTTGTTCAGTTGCTAGAAAACTTCCAGAGTCAACTCCAGCAGCAGGAAGCTaGACAGCCCACCAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: TRTNLSFCSVARKLPESTPAAGS*TAHQGQ
Trigger: CTGACCCTGGTGGGCTGTTCAGCTTCCTGCTGCTGG...AGTTGACTCTGGAAGTTTTCTAGCAACTGAACAAAAGCTCAGGTTTGTCCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp ACAGAAAGGGTAAGGAAGAGACCTTGTCCAGGCCCGCAAGAGGGCCAAGTTCATTTCCAAGGCTGGATGTaGGCTTACACAGCAAATCAC +
Preference number: 4 (lower is better)
Translates to: TERVRKRPCPGPQEGQVHFQGWM*AYTANH
Trigger: GTGATTTGCTGTGTAAGCTCACATCCAGCCTTGGAA...ATGAACTTGGCCCTCTTGCGGGCCTGGACAAGGTCTCTTCCTTACCCTTTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp ACAGAAAGGGTAAGGAAGAGACCTTGTCCAGGCCCGCAAGAGGGCCAAGTTCATCTTCAAAACAGTACTTaGAGAGGACCCACGTGGTAC +
Preference number: 4 (lower is better)
Translates to: TERVRKRPCPGPQEGQVHLQNST*RGPTWY
Trigger: GTACCACGTGGGTCCTCTTCAAGTACTGTTTTGAAG...ATGAACTTGGCCCTCTTGCGGGCCTGGACAAGGTCTCTTCCTTACCCTTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp GTCATGGCGGAGGTGAGCATCGTCATCAATGGACAGGATGGCCTCTGTCTCAATTCAGTACGGACCACGTaGCAGATTGATGATGACATG +
Preference number: 4 (lower is better)
Translates to: VMAEVSIVINGQDGLCLNSVRTT*QIDDDM
Trigger: CATGTCATCATCAATCTGTCACGTGGTCCGTACTGA...ATTGAGACAGAGGCCATCCTGTCCATTGATGACGATGCTCACCTCCGCCATGAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522698.1
CDS-3UTR GCA 90 bp AAGGATAAGCCAGTGACACAAGGCCAGGACCCATCTCCGCCAGAATACAGAACATGCCCTTCCACATCCTaGTTAAAGCACCTCAACAGC +
Preference number: 4 (lower is better)
Translates to: KDKPVTQGQDPSPPEYRTCPSTS*LKHLNS
Trigger: GCTGTTGAGGTGCTTTAAGCAGGATGTGGAAGGGCA...TGTTCTGTATTCTGGCGGAGATGGGTCCTGGCCTTGTGTCACTGGCTTATCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp ACAGAAAGGGTAAGGAAGAGACCTTGTCCAGGCCCGCAAGAGGGCCAAGTTCATAGATTGATGATGACATaGTTGTGTCCATCCGTCCGC +
Preference number: 4 (lower is better)
Translates to: TERVRKRPCPGPQEGQVHRLMMT*LCPSVR
Trigger: GCGGACGGATGGACACAACCATGTCATCATCAATCT...ATGAACTTGGCCCTCTTGCGGGCCTGGACAAGGTCTCTTCCTTACCCTTTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp ACTGGCTTAAGGCATGTGCATGACCAGGACAAACCTGAGCTTTTGTTCAGTTGCTGGCCTGCAGAGCCCTaGGACGGTGTTATGGTAAGA +
Preference number: 4 (lower is better)
Translates to: TGLRHVHDQDKPELLFSCWPAEP*DGVMVR
Trigger: TCTTACCATAACACCGTCCCAGGGCTCTGCAGGCCA...GCAACTGAACAAAAGCTCAGGTTTGTCCTGGTCATGCACATGCCTTAAGCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp GGGTCCGGTTTGCCAATGGGGAGAGTTCCCTTAAGCCGAGCTAGCCCTACAGGTGTTTCTTGGTTTTGCTaGCCAACAAATATGCATAGT +
Preference number: 4 (lower is better)
Translates to: GSGLPMGRVPLSRASPTGVSWFC*PTNMHS
Trigger: ACTATGCATATTTGTTGGTCAGCAAAACCAAGAAAC...ACCTGTAGGGCTAGCTCGGCTTAAGGGAACTCTCCCCATTGGCAAACCGGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp TCGTCATCAATGGACAGGATGGCCTCTGTCTCAATTTCATTCCAGGGTAAGAATGCTCGTGCTGTCGCCTaGAAAGCCTGCTTGACCAAG +
Preference number: 4 (lower is better)
Translates to: SSSMDRMASVSISFQGKNARAVA*KACLTK
Trigger: CTTGGTCAAGCAGGCTTTTCAGGCGACAGCACGAGC...ATTCTTACCCTGGAATGAAATTGAGACAGAGGCCATCCTGTCCATTGATGACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522698.1
CDS-3UTR TCA 90 bp ACTGGCTTAAGGCATGTGCATGACCAGGACAAACCTGAGCTTTTGTTCAGTTGCTATCGGAGAGGCTTCTaGGCAGGAAATGAACCTCGG +
Preference number: 4 (lower is better)
Translates to: TGLRHVHDQDKPELLFSCYRRGF*AGNEPR
Trigger: CCGAGGTTCATTTCCTGCTCAGAAGCCTCTCCGATA...GCAACTGAACAAAAGCTCAGGTTTGTCCTGGTCATGCACATGCCTTAAGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp ACTGGCTTAAGGCATGTGCATGACCAGGACAAACCTGAGCTTTTGTTCAGTTGCAGATGTGCACGCTGCTaGTCTCCTGTCCAATCCAAG +
Preference number: 4 (lower is better)
Translates to: TGLRHVHDQDKPELLFSCRCARC*SPVQSK
Trigger: CTTGGATTGGACAGGAGATCAGCAGCGTGCACATCT...GCAACTGAACAAAAGCTCAGGTTTGTCCTGGTCATGCACATGCCTTAAGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp ACAGGCAGGTCAGAGGAGAACGTATTCCAAGAAATAGAAGCACAGGATGCCAAGTATAGGTCAGGGGCATaGCCTATGGACCGAATCGAG +
Preference number: 4 (lower is better)
Translates to: TGRSEENVFQEIEAQDAKYRSGA*PMDRIE
Trigger: CTCGATTCGGTCCATAGGTCATGCCCCTGACCTATA...CTTGGCATCCTGTGCTTCTATTTCTTGGAATACGTTCTCCTCTGACCTGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp TGTATTCATCCACCATGTCCCGGATGGCCTGGGGCATCACATAAGAATACAGGTGCTCACAGGAGTAGTTaGAGTTGTAGAGCCAGGACT +
Preference number: 4 (lower is better)
Translates to: CIHPPCPGWPGASHKNTGAHRSS*SCRART
Trigger: AGTCCTGGCTCTACAACTCCAACTACTCCTGTGAGC...ACCTGTATTCTTATGTGATGCCCCAGGCCATCCGGGACATGGTGGATGAATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522698.1
CDS-3UTR TCA 90 bp ACCAGGACAAACCTGAGCTTTTGTTCAGTTGCTAGAAAACTTCCAGAGTCAACTGTGGTGAGAAGCACCTaGCCAGTGACACTGTGGCCA +
Preference number: 4 (lower is better)
Translates to: TRTNLSFCSVARKLPESTVVRST*PVTLWP
Trigger: TGGCCACAGTGTCACTGGTCAGGTGCTTCTCACCAC...AGTTGACTCTGGAAGTTTTCTAGCAACTGAACAAAAGCTCAGGTTTGTCCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp TGTATTCATCCACCATGTCCCGGATGGCCTGGGGCATCACATAAGAATACAGGTATAAACGTTAGCTCGTaGTGTCGCCTGAAAAGCCTG +
Preference number: 4 (lower is better)
Translates to: CIHPPCPGWPGASHKNTGINVSS*CRLKSL
Trigger: CAGGCTTTTCAGGCGACAGCACGAGCTAACGTTTAT...ACCTGTATTCTTATGTGATGCCCCAGGCCATCCGGGACATGGTGGATGAATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522698.1
CDS-3UTR GCA 90 bp GGAGTGGAAAGTGGTAACTCGGGTTGTGAATGCCCGTTAGATTCCAAGGCTGGATTTTCTACAGCCTCATaGCACCTTCTCAAGTCTCTC +
Preference number: 4 (lower is better)
Translates to: GVESGNSGCECPLDSKAGFSTAS*HLLKSL
Trigger: GAGAGACTTGAGAAGGTGGCATGAGGCTGTAGAAAA...TCCAGCCTTGGAATCTAACGGGCATTCACAACCCGAGTTACCACTTTCCACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp CTCACCCATCAGCTGCTGCAAACTTGCCTGATCAGTCGTGAACCCCACTTGAGGTCAAGAAACACGTCATaGGCTAAATCCCTGACAAAT +
Preference number: 4 (lower is better)
Translates to: LTHQLLQTCLISREPHLRSRNTS*AKSLTN
Trigger: ATTTGTCAGGGATTTAGCCCATGACGTGTTTCTTGA...CCTCAAGTGGGGTTCACGACTGATCAGGCAAGTTTGCAGCAGCTGATGGGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp ACCAGGACAAACCTGAGCTTTTGTTCAGTTGCTAGAAAACTTCCAGAGTCAACTCGTGACGAAAAGGGGTaGGGTGGATGGACGTGGCAT +
Preference number: 4 (lower is better)
Translates to: TRTNLSFCSVARKLPESTRDEKG*GGWTWH
Trigger: ATGCCACGTCCATCCACCCCACCCCTTTTCGTCACG...AGTTGACTCTGGAAGTTTTCTAGCAACTGAACAAAAGCTCAGGTTTGTCCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp ACCAGGACAAACCTGAGCTTTTGTTCAGTTGCTAGAAAACTTCCAGAGTCAACTCTGTTCACCCATCTCTaGTCCACAGCCCACACCAGG +
Preference number: 4 (lower is better)
Translates to: TRTNLSFCSVARKLPESTLFTHL*STAHTR
Trigger: CCTGGTGTGGGCTGTGGACCAGAGATGGGTGAACAG...AGTTGACTCTGGAAGTTTTCTAGCAACTGAACAAAAGCTCAGGTTTGTCCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp CACACACCACACTCTTTGGCTCCCCGAGGGAAGAAGGCTACTGCTAAAAGGAATCAATGTCCTCACAGTTaGTGTATTCATCCACCATGT +
Preference number: 4 (lower is better)
Translates to: HTPHSLAPRGKKATAKRNQCPHS*CIHPPC
Trigger: ACATGGTGGATGAATACATCAACTGTGAGGACATTG...ATTCCTTTTAGCAGTAGCCTTCTTCCCTCGGGGAGCCAAAGAGTGTGGTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp AAATTAACTTTGCATATATGGGCCACATGCCCTTCCACATCCTGCTTAAAGCACGGCAGGGAATACAACTaGTTCTCCAGCTCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: KLTLHIWATCPSTSCLKHGREYN*FSSSAG
Trigger: GCCTGCTGAGCTGGAGAAGCAGTTGTATTCCCTGCC...GTGCTTTAAGCAGGATGTGGAAGGGCATGTGGCCCATATATGCAAAGTTAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp ACCAGGACAAACCTGAGCTTTTGTTCAGTTGCTAGAAAACTTCCAGAGTCAACTGCGTCTGACCCCCACTaGTGGGAACATAACCACACT +
Preference number: 4 (lower is better)
Translates to: TRTNLSFCSVARKLPESTASDPH*WEHNHT
Trigger: AGTGTGGTTATGTTCCCAGCAGTGGGGGTCAGACGC...AGTTGACTCTGGAAGTTTTCTAGCAACTGAACAAAAGCTCAGGTTTGTCCTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp CACACACCACACTCTTTGGCTCCCCGAGGGAAGAAGGCTACTGCTAAAAGGAATTCAATCTTCTCGCCCTaGAAGGTGAAGAGATATTTC +
Preference number: 4 (lower is better)
Translates to: HTPHSLAPRGKKATAKRNSIFSP*KVKRYF
Trigger: GAAATATCTCTTCACCTTCCAGGGCGAGAAGATTGA...ATTCCTTTTAGCAGTAGCCTTCTTCCCTCGGGGAGCCAAAGAGTGTGGTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp TCGTCATCAATGGACAGGATGGCCTCTGTCTCAATTTCATTCCAGGGTAAGAATCACCTGTCAGCACCATaGACAGCTCACAGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: SSSMDRMASVSISFQGKNHLSAP*TAHRSS
Trigger: ACTACTCCTGTGAGCTGTCCATGGTGCTGACAGGTG...ATTCTTACCCTGGAATGAAATTGAGACAGAGGCCATCCTGTCCATTGATGACGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522698.1
CDS-3UTR CCA 90 bp ACTGGCTTAAGGCATGTGCATGACCAGGACAAACCTGAGCTTTTGTTCAGTTGCAAGTTCATCCCTTTCTaGTTGCTGCACACAGATGGC +
Preference number: 4 (lower is better)
Translates to: TGLRHVHDQDKPELLFSCKFIPF*LLHTDG
Trigger: GCCATCTGTGTGCAGCAACCAGAAAGGGATGAACTT...GCAACTGAACAAAAGCTCAGGTTTGTCCTGGTCATGCACATGCCTTAAGCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp ACAGGCAGGTCAGAGGAGAACGTATTCCAAGAAATAGAAGCACAGGATGCCAAGGTACGGAGGCAAGCCTaGCCTAAAGATAAATCCTCA +
Preference number: 4 (lower is better)
Translates to: TGRSEENVFQEIEAQDAKVRRQA*PKDKSS
Trigger: TGAGGATTTATCTTTAGGCCAGGCTTGCCTCCGTAC...CTTGGCATCCTGTGCTTCTATTTCTTGGAATACGTTCTCCTCTGACCTGCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp ACCAGGACAAACCTGAGCTTTTGTTCAGTTGCTAGAAAACTTCCAGAGTCAACTAGCCCTACAGGTGGGTaGGAGCTACACAAAAGAGCC +
Preference number: 4 (lower is better)
Translates to: TRTNLSFCSVARKLPESTSPTGG*ELHKRA
Trigger: GGCTCTTTTGTGTAGCTCCCACCCACCTGTAGGGCT...AGTTGACTCTGGAAGTTTTCTAGCAACTGAACAAAAGCTCAGGTTTGTCCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp ACCAGGACAAACCTGAGCTTTTGTTCAGTTGCTAGAAAACTTCCAGAGTCAACTGTGGTGGGATTTCCATaGAGTTGGGCTCAGACATGG +
Preference number: 4 (lower is better)
Translates to: TRTNLSFCSVARKLPESTVVGFP*SWAQTW
Trigger: CCATGTCTGAGCCCAACTTCATGGAAATCCCACCAC...AGTTGACTCTGGAAGTTTTCTAGCAACTGAACAAAAGCTCAGGTTTGTCCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp GACCGTAAGTCCAAGACACAACTCGACAGGTATAGACTCAAAGCAGACATCATATTAAGGATAAGCCAGTaGCACAAGGCCAGGACCCAT +
Preference number: 4 (lower is better)
Translates to: DRKSKTQLDRYRLKADIILRISQ*HKARTH
Trigger: ATGGGTCCTGGCCTTGTGTCACTGGCTTATCCTTAA...TATGATGTCTGCTTTGAGTCTATACCTGTCGAGTTGTGTCTTGGACTTACGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp ACCAGGACAAACCTGAGCTTTTGTTCAGTTGCTAGAAAACTTCCAGAGTCAACTGGAAGAACAGGAGCTTaGCAGCCAAAACTCCAGACC +
Preference number: 4 (lower is better)
Translates to: TRTNLSFCSVARKLPESTGRTGA*QPKLQT
Trigger: GGTCTGGAGTTTTGGCTGTCAAGCTCCTGTTCTTCC...AGTTGACTCTGGAAGTTTTCTAGCAACTGAACAAAAGCTCAGGTTTGTCCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR GCA 90 bp GCTCACCGAGTCCCACTGAAGTCAGTATGTGAGTTCCTCACATTAAAAGAAACCTTCGAAGAGCCGTGTTaGACACCCAGAGGAAATAAC +
Preference number: 4 (lower is better)
Translates to: AHRVPLKSVCEFLTLKETFEEPC*TPRGNN
Trigger: GTTATTTCCTCTGGGTGTGCAACACGGCTCTTCGAA...GGTTTCTTTTAATGTGAGGAACTCACATACTGACTTCAGTGGGACTCGGTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp ACCAGGACAAACCTGAGCTTTTGTTCAGTTGCTAGAAAACTTCCAGAGTCAACTCCTCTGATGGCAGCTTaGGAGAATTCCACACCACCA +
Preference number: 4 (lower is better)
Translates to: TRTNLSFCSVARKLPESTPLMAA*ENSTPP
Trigger: TGGTGGTGTGGAATTCTCCCAAGCTGCCATCAGAGG...AGTTGACTCTGGAAGTTTTCTAGCAACTGAACAAAAGCTCAGGTTTGTCCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp GCTCACCGAGTCCCACTGAAGTCAGTATGTGAGTTCCTCACATTAAAAGAAACCATCCTAAGCAGGGAGTaGAAAGTGGTAACTCGGGTT +
Preference number: 4 (lower is better)
Translates to: AHRVPLKSVCEFLTLKETILSRE*KVVTRV
Trigger: AACCCGAGTTACCACTTTCCACTCCCTGCTTAGGAT...GGTTTCTTTTAATGTGAGGAACTCACATACTGACTTCAGTGGGACTCGGTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp ACAGGCAGGTCAGAGGAGAACGTATTCCAAGAAATAGAAGCACAGGATGCCAAGGACCTCCAAGCTGCTTaGGTTAAAGTCTCCATTTAT +
Preference number: 4 (lower is better)
Translates to: TGRSEENVFQEIEAQDAKDLQAA*VKVSIY
Trigger: ATAAATGGAGACTTTAACTCAAGCAGCTTGGAGGTC...CTTGGCATCCTGTGCTTCTATTTCTTGGAATACGTTCTCCTCTGACCTGCCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp GACCGTAAGTCCAAGACACAACTCGACAGGTATAGACTCAAAGCAGACATCATATCTTCAGATTCAGCTTaGCGATCTCGCTGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: DRKSKTQLDRYRLKADIISSDSA*RSRCSA
Trigger: AGCTGAACAGCGAGATCGCCAAGCTGAATCTGAAGA...TATGATGTCTGCTTTGAGTCTATACCTGTCGAGTTGTGTCTTGGACTTACGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp ACTGGCTTAAGGCATGTGCATGACCAGGACAAACCTGAGCTTTTGTTCAGTTGCAAATACTGTCAGCAGTaGAGAAGTAAGTCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: TGLRHVHDQDKPELLFSCKYCQQ*RSKSPR
Trigger: TCTGGGAGACTTACTTCTCCACTGCTGACAGTATTT...GCAACTGAACAAAAGCTCAGGTTTGTCCTGGTCATGCACATGCCTTAAGCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp ACTGGCTTAAGGCATGTGCATGACCAGGACAAACCTGAGCTTTTGTTCAGTTGCCATCAATGGACAGGATaGCCTCTGTCTCAATTTCAT +
Preference number: 4 (lower is better)
Translates to: TGLRHVHDQDKPELLFSCHQWTG*PLSQFH
Trigger: ATGAAATTGAGACAGAGGCCATCCTGTCCATTGATG...GCAACTGAACAAAAGCTCAGGTTTGTCCTGGTCATGCACATGCCTTAAGCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CCA 90 bp ACTGGCTTAAGGCATGTGCATGACCAGGACAAACCTGAGCTTTTGTTCAGTTGCGCAGATTTTAAGTTCTaGCTGTTGACCAAAGAACAT +
Preference number: 4 (lower is better)
Translates to: TGLRHVHDQDKPELLFSCADFKF*LLTKEH
Trigger: ATGTTCTTTGGTCAACAGCCAGAACTTAAAATCTGC...GCAACTGAACAAAAGCTCAGGTTTGTCCTGGTCATGCACATGCCTTAAGCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR TCA 90 bp AAATTAACTTTGCATATATGGGCCACATGCCCTTCCACATCCTGCTTAAAGCACGCTGTGATTTCTAAGTaGCCCTCTTCACTTTGTCAA +
Preference number: 4 (lower is better)
Translates to: KLTLHIWATCPSTSCLKHAVISK*PSSLCQ
Trigger: TTGACAAAGTGAAGAGGGTCACTTAGAAATCACAGC...GTGCTTTAAGCAGGATGTGGAAGGGCATGTGGCCCATATATGCAAAGTTAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS GCA 90 bp CGCCGCCGCCTGCGCGAAAGTCGGCGTCCCAGAAGCCGTTCTGGCTaGCGGCCGCCCGCCTTCCAGGCCGCGCCTGATCCGCCGCTCCCC +
Preference number: 5 (lower is better)
Translates to: RRRLRESRRPRSRSG*RPPAFQAAPDPPLP
Trigger: GGGGAGCGGCGGATCAGGCGCGGCCTGGAAGGCGGGCGGCCGGCAGCCAGAACGGCTTCTGGGACGCCGACTTTCGCGCAGGCGGCGGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS GCA 90 bp CTCCGGCTTCCAGCTCAGGGACCCGCCGCCGCCGCCGCCGCCGCCTaGGCGAAAGTCGGCGTCCCAGAAGCCGTTCTGGCTGCCGGCCGC +
Preference number: 5 (lower is better)
Translates to: LRLPAQGPAAAAAAA*AKVGVPEAVLAAGR
Trigger: GCGGCCGGCAGCCAGAACGGCTTCTGGGACGCCGACTTTCGCGCAGGCGGCGGCGGCGGCGGCGGCGGGTCCCTGAGCTGGAAGCCGGAG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CAA 90 bp GCGGCCCACAGACAGCCAAGGAGACCCGGGGTCTGTGGCGCCGCTTTCCCATCTCTCGCTGTTCAGCTCTaGGCGCTTGGCCTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: AAHRQPRRPGVCGAAFPSLAVQL*ALGLQL
Trigger: CAGCTGGAGGCCAAGCGCCAAGAGCTGAACAGCGAG...AGATGGGAAAGCGGCGCCACAGACCCCGGGTCTCCTTGGCTGTCTGTGGGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CAA 90 bp GGGTCTGTGGCGCCGCTTTCCCATCTCAAGCGAGTCACAGGTCGGCGGCTTTCCGTGAGGCGGATGCGGTaGGACCAGCGCAGCATGCAG +
Preference number: 5 (lower is better)
Translates to: GSVAPLSHLKRVTGRRLSVRRMR*DQRSMQ
Trigger: CTGCATGCTGCGCTGGTCCAACCGCATCCGCCTCAC...GGAAAGCCGCCGACCTGTGACTCGCTTGAGATGGGAAAGCGGCGCCACAGACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CAA 90 bp GCGGCCCACAGACAGCCAAGGAGACCCGGGGTCTGTGGCGCCGCTTTCCCATCTAGTCGTGAACCCCACTaGAGGAGGGACACCGACTGT +
Preference number: 5 (lower is better)
Translates to: AAHRQPRRPGVCGAAFPSSREPH*RRDTDC
Trigger: ACAGTCGGTGTCCCTCCTCAAGTGGGGTTCACGACT...AGATGGGAAAGCGGCGCCACAGACCCCGGGTCTCCTTGGCTGTCTGTGGGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS GCA 90 bp GCTTGGCCTCCAGCTGCAGGAGCTCTTCACTCACCGACTCCCGGATaGGGCACAGATCCAGCACGTGCTTCACCTCGCACAGCTCGTTCC +
Preference number: 5 (lower is better)
Translates to: AWPPAAGALHSPTPG*GTDPARASPRTARS
Trigger: GGAACGAGCTGTGCGAGGTGAAGCACGTGCTGGATCTGTGCCGCATCCGGGAGTCGGTGAGTGAAGAGCTCCTGCAGCTGGAGGCCAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CAA 90 bp CAAGGCCAGGACCCATCTCCGCCAGAATACAGAACAAAGGAGCCTGCGCGGTCCGGGGGCGGGGAACCTTaGGAAACACAGTCCTGGCGG +
Preference number: 5 (lower is better)
Translates to: QGQDPSPPEYRTKEPARSGGGEP*ETQSWR
Trigger: CCGCCAGGACTGTGTTTCCAAAGGTTCCCCGCCCCC...GGACCGCGCAGGCTCCTTTGTTCTGTATTCTGGCGGAGATGGGTCCTGGCCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CAA 90 bp GGCCTGGTCAGGCTGCCTCCCATCGTCTTCTGCGAGCAGGCCCAGCTGGCATACCACACACCACACTCTTaGGCTCCCCGAGGGAAGAAG +
Preference number: 5 (lower is better)
Translates to: GLVRLPPIVFCEQAQLAYHTPHS*APRGKK
Trigger: CTTCTTCCCTCGGGGAGCCAAAGAGTGTGGTGTGTG...GTATGCCAGCTGGGCCTGCTCGCAGAAGACGATGGGAGGCAGCCTGACCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS GCA 90 bp AGCTTGGCGATCTCGCTGTTCAGCTCTTGGCGCTTGGCCTCCAGCTaGAGGAGCTCTTCACTCACCGACTCCCGGATGCGGCACAGATCC +
Preference number: 5 (lower is better)
Translates to: SLAISLFSSWRLASS*RSSSLTDSRMRHRS
Trigger: GGATCTGTGCCGCATCCGGGAGTCGGTGAGTGAAGAGCTCCTGCAGCTGGAGGCCAAGCGCCAAGAGCTGAACAGCGAGATCGCCAAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS GCA 90 bp CACCACCGGGACGGCACCGACTTCCAGGGCTTCGAAGAGCCGTGTTaGACACCCAGAGGAAATAACCAAGCGAGGGTCCCCGGGGGTAAT +
Preference number: 5 (lower is better)
Translates to: HHRDGTDFQGFEEPC*TPRGNNQARVPGGN
Trigger: ATTACCCCCGGGGACCCTCGCTTGGTTATTTCCTCTGGGTGTGCAACACGGCTCTTCGAAGCCCTGGAAGTCGGTGCCGTCCCGGTGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000220562.9
ENST00000523149.5
CDS-3UTR CAA 90 bp GCGGCCCACAGACAGCCAAGGAGACCCGGGGTCTGTGGCGCCGCTTTCCCATCTGGTTTGGGCTGGTTTTaGCAGGTGAATTCCACCAGG +
Preference number: 5 (lower is better)
Translates to: AAHRQPRRPGVCGAAFPSGLGWF*QVNSTR
Trigger: CCTGGTGGAATTCACCTGCAAAAACCAGCCCAAACC...AGATGGGAAAGCGGCGCCACAGACCCCGGGTCTCCTTGGCTGTCTGTGGGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CAA 90 bp CCCAGAAAGATCCCATCCTTCCGGACAGGACCCCAGCTGGTGAGCCCTGGCCTGTCCCTGCGGCATGTTTaGGTGTCAGACCACTCAGCC +
Preference number: 5 (lower is better)
Translates to: PRKIPSFRTGPQLVSPGLSLRHV*VSDHSA
Trigger: GGCTGAGTGGTCTGACACCAAAACATGCCGCAGGGA...CAGGCCAGGGCTCACCAGCTGGGGTCCTGTCCGGAAGGATGGGATCTTTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CAA 90 bp GGCCTGGTCAGGCTGCCTCCCATCGTCTTCTGCGAGCAGGCCCAGCTGGCATACAGGGGTTTCGCCATTTaGGCCAGGCTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: GLVRLPPIVFCEQAQLAYRGFAI*ARLVSN
Trigger: GTTTGAGACCAGCCTGGCCAAAATGGCGAAACCCCT...GTATGCCAGCTGGGCCTGCTCGCAGAAGACGATGGGAGGCAGCCTGACCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS TCA 90 bp GCGGGAGGGTCGCCCTCCATTTCCTCTTCGAAGGAGCGGGCCTCCTaGAGGCTAGACCTCAGAGACTCAATCTTCTCGCCCTGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: AGGSPSISSSKERAS*RLDLRDSIFSPWKV
Trigger: CACCTTCCAGGGCGAGAAGATTGAGTCTCTGAGGTCTAGCCTTCAGGAGGCCCGCTCCTTCGAAGAGGAAATGGAGGGCGACCCTCCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS GCA 90 bp ACATGGTTGTGTCCATCCGTCCGCCAGTGTGGCAGGGAATACAACTaGTTCTCCAGCTCAGCAGGCCGCAGCACCACCGGCTCCTGCATC +
Preference number: 5 (lower is better)
Translates to: TWLCPSVRQCGREYN*FSSSAGRSTTGSCI
Trigger: GATGCAGGAGCCGGTGGTGCTGCGGCCTGCTGAGCTGGAGAAGCAGTTGTATTCCCTGCCACACTGGCGGACGGATGGACACAACCATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220562.9
ENST00000522698.1
CDS-3UTR CAA 90 bp TCCCACAGCCAAGCACAAGATCTAGGCCTGTGGGCACCAACAGGATGGGGCTCTCCAGAGAAAGCGGCCTaGCCGCCTCATAGCCAGGAG +
Preference number: 5 (lower is better)
Translates to: SHSQAQDLGLWAPTGWGSPEKAA*PPHSQE
Trigger: CTCCTGGCTATGAGGCGGCAAGGCCGCTTTCTCTGG...AGAGCCCCATCCTGTTGGTGCCCACAGGCCTAGATCTTGTGCTTGGCTGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CAA 90 bp CCCAGAAAGATCCCATCCTTCCGGACAGGACCCCAGCTGGTGAGCCCTGGCCTGCCTGAGCCCAAGAATTaGGCCTCTGAGGGCAACACA +
Preference number: 5 (lower is better)
Translates to: PRKIPSFRTGPQLVSPGLPEPKN*ASEGNT
Trigger: TGTGTTGCCCTCAGAGGCCAAATTCTTGGGCTCAGG...CAGGCCAGGGCTCACCAGCTGGGGTCCTGTCCGGAAGGATGGGATCTTTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CAA 90 bp ACAGAAAGGGTAAGGAAGAGACCTTGTCCAGGCCCGCAAGAGGGCCAAGTTCATGGTGATCCACCCGCCTaGGCCTCCCCAGGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: TERVRKRPCPGPQEGQVHGDPPA*ASPGAG
Trigger: CCCAGCACCTGGGGAGGCCAAGGCGGGTGGATCACC...ATGAACTTGGCCCTCTTGCGGGCCTGGACAAGGTCTCTTCCTTACCCTTTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS TCA 90 bp GTGCCCACTCAGTCGGCAGGCTGGGTTTGGGCTGGTTTTTGCAGGTaGATTCCACCAGGACCTGATCCAGCTTGCTGTCCTGCACCGCCT +
Preference number: 5 (lower is better)
Translates to: VPTQSAGWVWAGFCR*IPPGPDPACCPAPP
Trigger: AGGCGGTGCAGGACAGCAAGCTGGATCAGGTCCTGGTGGAATTCACCTGCAAAAACCAGCCCAAACCCAGCCTGCCGACTGAGTGGGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS GCA 90 bp GGAGAGCTTCAGCAATTCCAAGCGGTCCTCCCGCTCTCCACACAGTaGCCACTCAGTCGGCAGGCTGGGTTTGGGCTGGTTTTTGCAGGT +
Preference number: 5 (lower is better)
Translates to: GELQQFQAVLPLSTQ*PLSRQAGFGLVFAG
Trigger: ACCTGCAAAAACCAGCCCAAACCCAGCCTGCCGACTGAGTGGGCACTGTGTGGAGAGCGGGAGGACCGCTTGGAATTGCTGAAGCTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000220562.9
ENST00000523149.5
CDS-3UTR CAA 90 bp ACAGAAAGGGTAAGGAAGAGACCTTGTCCAGGCCCGCAAGAGGGCCAAGTTCATGCGGCCGGGTCCGGTTaGCCAATGGGGAGAGTTCCC +
Preference number: 5 (lower is better)
Translates to: TERVRKRPCPGPQEGQVHAAGSG*PMGRVP
Trigger: GGGAACTCTCCCCATTGGCAAACCGGACCCGGCCGC...ATGAACTTGGCCCTCTTGCGGGCCTGGACAAGGTCTCTTCCTTACCCTTTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CAA 90 bp GCGGCCCACAGACAGCCAAGGAGACCCGGGGTCTGTGGCGCCGCTTTCCCATCTCTAACATTTACCACCTaGGCAGACCGTAAGTCCAAG +
Preference number: 5 (lower is better)
Translates to: AAHRQPRRPGVCGAAFPSLTFTT*ADRKSK
Trigger: CTTGGACTTACGGTCTGCCAAGGTGGTAAATGTTAG...AGATGGGAAAGCGGCGCCACAGACCCCGGGTCTCCTTGGCTGTCTGTGGGCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS TCA 90 bp CTCATAGCCAGGAGGTCACTATCGGAGAGGCTTCTGAGCAGGAAATaGACCTCGGTAACACGAGGCTTTGGCACCACCAGGGCCGCCTCG +
Preference number: 5 (lower is better)
Translates to: LIARRSLSERLLSRK*TSVTRGFGTTRAAS
Trigger: CGAGGCGGCCCTGGTGGTGCCAAAGCCTCGTGTTACCGAGGTTCATTTCCTGCTCAGAAGCCTCTCCGATAGTGACCTCCTGGCTATGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220562.9
ENST00000523149.5
CDS TCA 90 bp GTAAAAGTCAGTGACAGTCAGAGTGAAATTGCGGAGGTATCTGGGTaGGGCGTAGGGCGGCTCCGTCTCCACTGGCCCCAGGTCCAGGTC +
Preference number: 5 (lower is better)
Translates to: VKVSDSQSEIAEVSG*GVGRLRLHWPQVQV
Trigger: GACCTGGACCTGGGGCCAGTGGAGACGGAGCCGCCCTACGCCTCACCCAGATACCTCCGCAATTTCACTCTGACTGTCACTGACTTTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220562.9
ENST00000523149.5
CDS TCA 90 bp ACCACCGTGAACTGCTCTCGGGGAACATTGCCTCCAAGCGCTGCCTaGAATTCCTTGCCAGAACCCCCAGCTCCACCACCAATAGGCCGA +
Preference number: 5 (lower is better)
Translates to: TTVNCSRGTLPPSAA*NSLPEPPAPPPIGR
Trigger: TCGGCCTATTGGTGGTGGAGCTGGGGGTTCTGGCAAGGAATTTCAGGCAGCGCTTGGAGGCAATGTTCCCCGAGAGCAGTTCACGGTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000220562.9
ENST00000523149.5
CDS CCA 90 bp TCTTCAGATTCAGCTTGGCGATCTCGCTGTTCAGCTCTTGGCGCTTaGCCTCCAGCTGCAGGAGCTCTTCACTCACCGACTCCCGGATGC +
Preference number: 5 (lower is better)
Translates to: SSDSAWRSRCSALGA*PPAAGALHSPTPGC
Trigger: GCATCCGGGAGTCGGTGAGTGAAGAGCTCCTGCAGCTGGAGGCCAAGCGCCAAGAGCTGAACAGCGAGATCGCCAAGCTGAATCTGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS CCA 90 bp CGCTCTCCACACAGTGCCCACTCAGTCGGCAGGCTGGGTTTGGGCTaGTTTTTGCAGGTGAATTCCACCAGGACCCTTCCTTCCTCTGAC +
Preference number: 5 (lower is better)
Translates to: RSPHSAHSVGRLGLG*FLQVNSTRTLPSSD
Trigger: GTCAGAGGAAGGAAGGGTCCTGGTGGAATTCACCTGCAAAAACCAGCCCAAACCCAGCCTGCCGACTGAGTGGGCACTGTGTGGAGAGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523149.5
CDS-3UTR CAA 90 bp ATTCACAGTGAGGCCTCACCTGTCCTGGGATCGCAGGCACACACAGCTCCCCACTCCTCTGATGGCAGCTaGGGAGAATTCCACACCACC +
Preference number: 5 (lower is better)
Translates to: IHSEASPVLGSQAHTAPHSSDGS*GEFHTT
Trigger: GGTGGTGTGGAATTCTCCCAAGCTGCCATCAGAGGA...GTGGGGAGCTGTGTGTGCCTGCGATCCCAGGACAGGTGAGGCCTCACTGTGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS GCA 90 bp CATCACCACCGTGAACTGCTCTCGGGGAACATTGCCTCCAAGCGCTaGCTGAAATTCCTTGCCAGAACCCCCAGCTCCACCACCAATAGG +
Preference number: 5 (lower is better)
Translates to: HHHRELLSGNIASKR*LKFLARTPSSTTNR
Trigger: CCTATTGGTGGTGGAGCTGGGGGTTCTGGCAAGGAATTTCAGGCAGCGCTTGGAGGCAATGTTCCCCGAGAGCAGTTCACGGTGGTGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000220562.9
ENST00000523149.5
CDS CCA 90 bp GCTTCGATCTTCAGATTCAGCTTGGCGATCTCGCTGTTCAGCTCTTaGCGCTTGGCCTCCAGCTGCAGGAGCTCTTCACTCACCGACTCC +
Preference number: 5 (lower is better)
Translates to: ASIFRFSLAISLFSS*RLASSCRSSSLTDS
Trigger: GGAGTCGGTGAGTGAAGAGCTCCTGCAGCTGGAGGCCAAGCGCCAAGAGCTGAACAGCGAGATCGCCAAGCTGAATCTGAAGATCGAAGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CAA 90 bp GGGTCCGGTTTGCCAATGGGGAGAGTTCCCTTAAGCCGAGCTAGCCCTACAGGTTGGAGCAGGTCCTGCTaGGCGTTCTCAATGCTCTTC +
Preference number: 5 (lower is better)
Translates to: GSGLPMGRVPLSRASPTGWSRSC*AFSMLF
Trigger: GAAGAGCATTGAGAACGCCAAGCAGGACCTGCTCCA...ACCTGTAGGGCTAGCTCGGCTTAAGGGAACTCTCCCCATTGGCAAACCGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CAA 90 bp GCGGCCCACAGACAGCCAAGGAGACCCGGGGTCTGTGGCGCCGCTTTCCCATCTGTCACTCTTCCATACTaGCTGAGGAAAACCACAAAA +
Preference number: 5 (lower is better)
Translates to: AAHRQPRRPGVCGAAFPSVTLPY*LRKTTK
Trigger: TTTTGTGGTTTTCCTCAGCAAGTATGGAAGAGTGAC...AGATGGGAAAGCGGCGCCACAGACCCCGGGTCTCCTTGGCTGTCTGTGGGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CAA 90 bp GTCCCATGCGTGGTAACGGCCAGGGAAGCCCACGATGCGGTCCCGAGCTTCTCTGGACCACGTGACAGATaGATGATGACATGGTTGTGT +
Preference number: 5 (lower is better)
Translates to: VPCVVTAREAHDAVPSFSGPRDR*MMTWLC
Trigger: ACACAACCATGTCATCATCAATCTGTCACGTGGTCC...AGAGAAGCTCGGGACCGCATCGTGGGCTTCCCTGGCCGTTACCACGCATGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522698.1
CDS TCA 90 bp GACCACCATGATGGGGACGCCAATGTCAGGCCACAGAAGGTCCTCTaGTGGCAGCTTGGGAGAATTCCACACCACCACGACCTTGTTCAG +
Preference number: 5 (lower is better)
Translates to: DHHDGDANVRPQKVL*WQLGRIPHHHDLVQ
Trigger: CTGAACAAGGTCGTGGTGGTGTGGAATTCTCCCAAGCTGCCATCAGAGGACCTTCTGTGGCCTGACATTGGCGTCCCCATCATGGTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220562.9
ENST00000521473.5
ENST00000523149.5
CDS CCA 90 bp GCCCTGGAAGGTGAAGAGATATTTCCGCTTCACCGGCACCTGTGGTaGGATTTCCATGAAGTTGGGCTCAGACATGGCATGGACCAGCGG +
Preference number: 5 (lower is better)
Translates to: ALEGEEIFPLHRHLW*DFHEVGLRHGMDQR
Trigger: CCGCTGGTCCATGCCATGTCTGAGCCCAACTTCATGGAAATCCCACCACAGGTGCCGGTGAAGCGGAAATATCTCTTCACCTTCCAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CAA 90 bp AAGGATAAGCCAGTGACACAAGGCCAGGACCCATCTCCGCCAGAATACAGAACACCGTTGTCAGCCATGTaGGGGTCAGTTCCAGCCGCC +
Preference number: 5 (lower is better)
Translates to: KDKPVTQGQDPSPPEYRTPLSAM*GSVPAA
Trigger: GGCGGCTGGAACTGACCCCAACATGGCTGACAACGG...TGTTCTGTATTCTGGCGGAGATGGGTCCTGGCCTTGTGTCACTGGCTTATCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CAA 90 bp TCCCACAGCCAAGCACAAGATCTAGGCCTGTGGGCACCAACAGGATGGGGCTCTAAGAAGTTGATGCACTaGTGCCGCTCGTGGAAGTGG +
Preference number: 5 (lower is better)
Translates to: SHSQAQDLGLWAPTGWGSKKLMH*CRSWKW
Trigger: CCACTTCCACGAGCGGCACAAGTGCATCAACTTCTT...AGAGCCCCATCCTGTTGGTGCCCACAGGCCTAGATCTTGTGCTTGGCTGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CAA 90 bp TCAACAGAAGAGCAGGATAGAAAGAGCCATCTGGGAGTGGCGTCTTCAGCCCCTGGTAAGGAAGAGACCTaGTCCAGGCCCGCAAGAGGG +
Preference number: 5 (lower is better)
Translates to: STEEQDRKSHLGVASSAPGKEET*SRPARG
Trigger: CCCTCTTGCGGGCCTGGACAAGGTCTCTTCCTTACC...AGGGGCTGAAGACGCCACTCCCAGATGGCTCTTTCTATCCTGCTCTTCTGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CAA 90 bp AAGGATAAGCCAGTGACACAAGGCCAGGACCCATCTCCGCCAGAATACAGAACAGGAGGGCTGTCCTTGTaGGAAGCACCGGCACCACAG +
Preference number: 5 (lower is better)
Translates to: KDKPVTQGQDPSPPEYRTGGLSL*EAPAPQ
Trigger: CTGTGGTGCCGGTGCTTCCAACAAGGACAGCCCTCC...TGTTCTGTATTCTGGCGGAGATGGGTCCTGGCCTTGTGTCACTGGCTTATCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CAA 90 bp ATTCACAGTGAGGCCTCACCTGTCCTGGGATCGCAGGCACACACAGCTCCCCACTGGAAGAACAGGAGCTaGACAGCCAAAACTCCAGAC +
Preference number: 5 (lower is better)
Translates to: IHSEASPVLGSQAHTAPHWKNRS*TAKTPD
Trigger: GTCTGGAGTTTTGGCTGTCAAGCTCCTGTTCTTCCA...GTGGGGAGCTGTGTGTGCCTGCGATCCCAGGACAGGTGAGGCCTCACTGTGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS CCA 90 bp GGCACCTGTGGTGGGATTTCCATGAAGTTGGGCTCAGACATGGCATaGACCAGCGGTGATACGACCAAGTCAAAGCCAGGTCTGTACTGG +
Preference number: 5 (lower is better)
Translates to: GTCGGISMKLGSDMA*TSGDTTKSKPGLYW
Trigger: CCAGTACAGACCTGGCTTTGACTTGGTCGTATCACCGCTGGTCCATGCCATGTCTGAGCCCAACTTCATGGAAATCCCACCACAGGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS CCA 90 bp CTCGCCCTGGAAGGTGAAGAGATATTTCCGCTTCACCGGCACCTGTaGTGGGATTTCCATGAAGTTGGGCTCAGACATGGCATGGACCAG +
Preference number: 5 (lower is better)
Translates to: LALEGEEIFPLHRHL*WDFHEVGLRHGMDQ
Trigger: CTGGTCCATGCCATGTCTGAGCCCAACTTCATGGAAATCCCACCACAGGTGCCGGTGAAGCGGAAATATCTCTTCACCTTCCAGGGCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CAA 90 bp GGGTCCGGTTTGCCAATGGGGAGAGTTCCCTTAAGCCGAGCTAGCCCTACAGGTATCTTCAGATTCAGCTaGGCGATCTCGCTGTTCAGC +
Preference number: 5 (lower is better)
Translates to: GSGLPMGRVPLSRASPTGIFRFS*AISLFS
Trigger: GCTGAACAGCGAGATCGCCAAGCTGAATCTGAAGAT...ACCTGTAGGGCTAGCTCGGCTTAAGGGAACTCTCCCCATTGGCAAACCGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CAA 90 bp CACACACCACACTCTTTGGCTCCCCGAGGGAAGAAGGCTACTGCTAAAAGGAATAGGTCCAGGTCCCCGTaGTCAGCCATGTTGGGGTCA +
Preference number: 5 (lower is better)
Translates to: HTPHSLAPRGKKATAKRNRSRSP*SAMLGS
Trigger: TGACCCCAACATGGCTGACAACGGGGACCTGGACCT...ATTCCTTTTAGCAGTAGCCTTCTTCCCTCGGGGAGCCAAAGAGTGTGGTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CAA 90 bp TCCCACAGCCAAGCACAAGATCTAGGCCTGTGGGCACCAACAGGATGGGGCTCTATGAACTTGAAGCACTaGGTCTTGTCATGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: SHSQAQDLGLWAPTGWGSMNLKH*VLSWGR
Trigger: CCTGCCCCATGACAAGACCAAGTGCTTCAAGTTCAT...AGAGCCCCATCCTGTTGGTGCCCACAGGCCTAGATCTTGTGCTTGGCTGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CAA 90 bp CACACACCACACTCTTTGGCTCCCCGAGGGAAGAAGGCTACTGCTAAAAGGAATCAAGGAGGGCTGTCCTaGTTGGAAGCACCGGCACCA +
Preference number: 5 (lower is better)
Translates to: HTPHSLAPRGKKATAKRNQGGLS*LEAPAP
Trigger: TGGTGCCGGTGCTTCCAACAAGGACAGCCCTCCTTG...ATTCCTTTTAGCAGTAGCCTTCTTCCCTCGGGGAGCCAAAGAGTGTGGTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS TCA 90 bp GCGTGTACAGGAGGGGCATGTAGCCGTACACCTTCACGAAGAAGTTaGTGCACTTGTGCCGCTCGTGGAAGTGGGAGTCATCATGAGACA +
Preference number: 5 (lower is better)
Translates to: ACTGGACSRTPSRRS*CTCAARGSGSHHET
Trigger: TGTCTCATGATGACTCCCACTTCCACGAGCGGCACAAGTGCATCAACTTCTTCGTGAAGGTGTACGGCTACATGCCCCTCCTGTACACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220562.9
ENST00000520679.1
ENST00000521473.5
ENST00000523149.5
ENST00000523271.1
CDS TCA 90 bp CCTTCCTCTGACTTGTGTAGCATTACACCTCAGCACACGACTTCTTaGAAGAGTGAACCTCCAGGGCTTGCTCTCCTCGCTGCAGCGCCA +
Preference number: 5 (lower is better)
Translates to: PSSDLCSITPQHTTS*KSEPPGLALLAAAP
Trigger: TGGCGCTGCAGCGAGGAGAGCAAGCCCTGGAGGTTCACTCTTTCAAGAAGTCGTGTGCTGAGGTGTAATGCTACACAAGTCAGAGGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523149.5
CDS-3UTR CAA 90 bp ACTGGCTTAAGGCATGTGCATGACCAGGACAAACCTGAGCTTTTGTTCAGTTGCATGGGCAGGGACAGCTaGGGCTGGTTCTGGGCCATG +
Preference number: 5 (lower is better)
Translates to: TGLRHVHDQDKPELLFSCMGRDS*GWFWAM
Trigger: CATGGCCCAGAACCAGCCCAAGCTGTCCCTGCCCAT...GCAACTGAACAAAAGCTCAGGTTTGTCCTGGTCATGCACATGCCTTAAGCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CAA 90 bp TTCGTCATGGCGGAGGTGAGCATCGTCATCAATGGACAGGATGGCCTCTGTCTCTTGATGATGACATGGTaGTGTCCATCCGTCCGCCAG +
Preference number: 5 (lower is better)
Translates to: FVMAEVSIVINGQDGLCLLMMTW*CPSVRQ
Trigger: CTGGCGGACGGATGGACACAACCATGTCATCATCAA...GAGACAGAGGCCATCCTGTCCATTGATGACGATGCTCACCTCCGCCATGACGAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522698.1
CDS-3UTR CAA 90 bp ACTGGCTTAAGGCATGTGCATGACCAGGACAAACCTGAGCTTTTGTTCAGTTGCTCAGTTCCAGCCGCCTaGCCTGAACGGTGGGGGATC +
Preference number: 5 (lower is better)
Translates to: TGLRHVHDQDKPELLFSCSVPAA*PERWGI
Trigger: GATCCCCCACCGTTCAGGCAAGGCGGCTGGAACTGA...GCAACTGAACAAAAGCTCAGGTTTGTCCTGGTCATGCACATGCCTTAAGCCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CAA 90 bp TCAACAGAAGAGCAGGATAGAAAGAGCCATCTGGGAGTGGCGTCTTCAGCCCCTCAATGCCTAGGAACCTaGGGAGCCATCTTCCTCCCT +
Preference number: 5 (lower is better)
Translates to: STEEQDRKSHLGVASSAPQCLGT*GAIFLP
Trigger: AGGGAGGAAGATGGCTCCCAAGGTTCCTAGGCATTG...AGGGGCTGAAGACGCCACTCCCAGATGGCTCTTTCTATCCTGCTCTTCTGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CAA 90 bp CAAGGCCAGGACCCATCTCCGCCAGAATACAGAACAAAGGAGCCTGCGCGGTCCAATGTGAGTTACAGGTaGCTGACTGGCAACAGAAAG +
Preference number: 5 (lower is better)
Translates to: QGQDPSPPEYRTKEPARSNVSYR*LTGNRK
Trigger: CTTTCTGTTGCCAGTCAGCAACCTGTAACTCACATT...GGACCGCGCAGGCTCCTTTGTTCTGTATTCTGGCGGAGATGGGTCCTGGCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CAA 90 bp GCCCACAGCACGTGTGTTTCAACAGAAGAGCAGGATAGAAAGAGCCATCTGGGAGGAACTCCTGTGTTCTaGAGAGGCTGCAGTCCGGTG +
Preference number: 5 (lower is better)
Translates to: AHSTCVSTEEQDRKSHLGGTPVF*RGCSPV
Trigger: CACCGGACTGCAGCCTCTCAAGAACACAGGAGTTCC...TCCCAGATGGCTCTTTCTATCCTGCTCTTCTGTTGAAACACACGTGCTGTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS TCA 90 bp CCTTCCTCTGACTTGTGTAGCATTACACCTCAGCACACGACTTCTTaGAAGAGTGAACCTCCAGGGCTTGCTCTCCGGCTTCCAGCTCAG +
Preference number: 5 (lower is better)
Translates to: PSSDLCSITPQHTTS*KSEPPGLALRLPAQ
Trigger: CTGAGCTGGAAGCCGGAGAGCAAGCCCTGGAGGTTCACTCTTTCAAGAAGTCGTGTGCTGAGGTGTAATGCTACACAAGTCAGAGGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220562.9
ENST00000519886.5
CDS GCA 90 bp AGCAGTTTCCGGCGACTATGCCACAGATACGTGCATGGAAGTTACTaGCTCGAGCCTGTGCTTAGCAGTCGTTTCGGAGGATCAGTTACC +
Preference number: 5 (lower is better)
Translates to: SSFRRLCHRYVHGSY*LEPVLSSRFGGSVT
Trigger: GGTAACTGATCCTCCGAAACGACTGCTAAGCACAGGCTCGAGGCAGTAACTTCCATGCACGTATCTGTGGCATAGTCGCCGGAAACTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522725.5
CDS GCA 90 bp TCAGCAGCAGATACAGCAGTTTCCGGCGACTATGCCACAGATACGTaGATGGAAGTTACTGCCTCGAGCCTGTGCTTAGCAGTCGTTTCG +
Preference number: 5 (lower is better)
Translates to: SAADTAVSGDYATDT*MEVTASSLCLAVVS
Trigger: CGAAACGACTGCTAAGCACAGGCTCGAGGCAGTAACTTCCATGCACGTATCTGTGGCATAGTCGCCGGAAACTGCTGTATCTGCTGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522725.5
CDS CCA 90 bp ACCGTGAGGTCACCTTGTGAAAGAAGGCAGCACCTGTCAGCACCATaGACAGCTCACAGGAGTAGTTGGAGTTGTAGAGCCAGGACTGAT +
Preference number: 5 (lower is better)
Translates to: TVRSPCERRQHLSAP*TAHRSSWSCRARTD
Trigger: ATCAGTCCTGGCTCTACAACTCCAACTACTCCTGTGAGCTGTCCATGGTGCTGACAGGTGCTGCCTTCTTTCACAAGGTGACCTCACGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521473.5
CDS-3UTR CAA 90 bp TCCCAGAAAGATCCCATCCTTCCGGACAGGACCCCAGCTGGTGAGCCCTGGCCTTTTAAGTTCTGGCTGTaGACCAAAGAACATGTCCTT +
Preference number: 5 (lower is better)
Translates to: SQKDPILPDRTPAGEPWPFKFWL*TKEHVL
Trigger: AAGGACATGTTCTTTGGTCAACAGCCAGAACTTAAA...AGGCCAGGGCTCACCAGCTGGGGTCCTGTCCGGAAGGATGGGATCTTTCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CAA 90 bp AAGGATAAGCCAGTGACACAAGGCCAGGACCCATCTCCGCCAGAATACAGAACAGGACCAAAAATCCGCTaGCCTGCCTCATCAGCCTCA +
Preference number: 5 (lower is better)
Translates to: KDKPVTQGQDPSPPEYRTGPKIR*PASSAS
Trigger: TGAGGCTGATGAGGCAGGCAAGCGGATTTTTGGTCC...TGTTCTGTATTCTGGCGGAGATGGGTCCTGGCCTTGTGTCACTGGCTTATCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CAA 90 bp ACTGGCTTAAGGCATGTGCATGACCAGGACAAACCTGAGCTTTTGTTCAGTTGCGTCGGCAGGCTGGGTTaGGGCTGGTTTTTGCAGGTG +
Preference number: 5 (lower is better)
Translates to: TGLRHVHDQDKPELLFSCVGRLG*GWFLQV
Trigger: CACCTGCAAAAACCAGCCCAAACCCAGCCTGCCGAC...GCAACTGAACAAAAGCTCAGGTTTGTCCTGGTCATGCACATGCCTTAAGCCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CAA 90 bp ACAGAAAGGGTAAGGAAGAGACCTTGTCCAGGCCCGCAAGAGGGCCAAGTTCATACCTTCACGAAGAAGTaGATGCACTTGTGCCGCTCG +
Preference number: 5 (lower is better)
Translates to: TERVRKRPCPGPQEGQVHTFTKK*MHLCRS
Trigger: CGAGCGGCACAAGTGCATCAACTTCTTCGTGAAGGT...ATGAACTTGGCCCTCTTGCGGGCCTGGACAAGGTCTCTTCCTTACCCTTTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CAA 90 bp GCTCACCGAGTCCCACTGAAGTCAGTATGTGAGTTCCTCACATTAAAAGAAACCGACACTGTGGCCACCTaGCTGCCTCTCGCTGAGGAG +
Preference number: 5 (lower is better)
Translates to: AHRVPLKSVCEFLTLKETDTVAT*LPLAEE
Trigger: CTCCTCAGCGAGAGGCAGCAAGGTGGCCACAGTGTC...GGTTTCTTTTAATGTGAGGAACTCACATACTGACTTCAGTGGGACTCGGTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS TCA 90 bp AGACAAACTGGTCACTGTCATAGACGTAGACCGGGAAGCCAGAGGTaGGAGGGCAACGAGAATAATCAAAGCAGTTGTGTAGCCGGCAGC +
Preference number: 5 (lower is better)
Translates to: RQTGHCHRRRPGSQR*EGNENNQSSCVAGS
Trigger: GCTGCCGGCTACACAACTGCTTTGATTATTCTCGTTGCCCTCTCACCTCTGGCTTCCCGGTCTACGTCTATGACAGTGACCAGTTTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS TCA 90 bp CCTTCCTCTGACTTGTGTAGCATTACACCTCAGCACACGACTTCTTaGAAGAGTGAACCTCCAGGGCTTGCTCTCTCAGATGCACCTGGG +
Preference number: 5 (lower is better)
Translates to: PSSDLCSITPQHTTS*KSEPPGLALSDAPG
Trigger: CCCAGGTGCATCTGAGAGAGCAAGCCCTGGAGGTTCACTCTTTCAAGAAGTCGTGTGCTGAGGTGTAATGCTACACAAGTCAGAGGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519288.5
CDS TCA 90 bp CCTTCCTCTGACTTGTGTAGCATTACACCTCAGCACACGACTTCTTaGAAGAGTGAACCTCCAGGGCTTGCTCTCCACTCAGGCTGCCTT +
Preference number: 5 (lower is better)
Translates to: PSSDLCSITPQHTTS*KSEPPGLALHSGCL
Trigger: AAGGCAGCCTGAGTGGAGAGCAAGCCCTGGAGGTTCACTCTTTCAAGAAGTCGTGTGCTGAGGTGTAATGCTACACAAGTCAGAGGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522725.5
CDS-3UTR CAA 90 bp GACCGTAAGTCCAAGACACAACTCGACAGGTATAGACTCAAAGCAGACATCATAGTGAACCTCCAGGGCTaGCTCTCCGGCTTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: DRKSKTQLDRYRLKADIIVNLQG*LSGFQL
Trigger: GAGCTGGAAGCCGGAGAGCAAGCCCTGGAGGTTCAC...TATGATGTCTGCTTTGAGTCTATACCTGTCGAGTTGTGTCTTGGACTTACGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CAA 90 bp ACAGAAAGGGTAAGGAAGAGACCTTGTCCAGGCCCGCAAGAGGGCCAAGTTCATACAGTCAGAGTGAAATaGCGGAGGTATCTGGGTGAG +
Preference number: 5 (lower is better)
Translates to: TERVRKRPCPGPQEGQVHTVRVK*RRYLGE
Trigger: CTCACCCAGATACCTCCGCAATTTCACTCTGACTGT...ATGAACTTGGCCCTCTTGCGGGCCTGGACAAGGTCTCTTCCTTACCCTTTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CAA 90 bp GGACCCATCTCCGCCAGAATACAGAACAAAGGAGCCTGCGCGGTCCCTCCCTTACAGGGTAAGAATCGGTaGTTCAAACTGTTCTTCTCA +
Preference number: 5 (lower is better)
Translates to: GPISARIQNKGACAVPPLQGKNR*FKLFFS
Trigger: TGAGAAGAACAGTTTGAACAACCGATTCTTACCCTG...TAAGGGAGGGACCGCGCAGGCTCCTTTGTTCTGTATTCTGGCGGAGATGGGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CAA 90 bp TCAACAGAAGAGCAGGATAGAAAGAGCCATCTGGGAGTGGCGTCTTCAGCCCCTAGATGGGCACAACTTTaGCCACCGTATGGTGGGATT +
Preference number: 5 (lower is better)
Translates to: STEEQDRKSHLGVASSAPRWAQL*PPYGGI
Trigger: AATCCCACCATACGGTGGCAAAAGTTGTGCCCATCT...AGGGGCTGAAGACGCCACTCCCAGATGGCTCTTTCTATCCTGCTCTTCTGTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS TCA 90 bp GGACAGTGTAGAAGGTGGACTGGGCCACCATGGCACGGCCAGTACTaGCGTTATAGAGAAGGTTCTGTGTATCTGACTTACGTGACAGAT +
Preference number: 5 (lower is better)
Translates to: GQCRRWTGPPWHGQY*RYREGSVYLTYVTD
Trigger: ATCTGTCACGTAAGTCAGATACACAGAACCTTCTCTATAACGTCAGTACTGGCCGTGCCATGGTGGCCCAGTCCACCTTCTACACTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS TCA 90 bp TGGGATTTCCATGAAGTTGGGCTCAGACATGGCATGGACCAGCGGTaGTACGACCAAGTCAAAGCCAGGTCTGTACTGGACAGTGTAGAA +
Preference number: 5 (lower is better)
Translates to: WDFHEVGLRHGMDQR*YDQVKARSVLDSVE
Trigger: TTCTACACTGTCCAGTACAGACCTGGCTTTGACTTGGTCGTATCACCGCTGGTCCATGCCATGTCTGAGCCCAACTTCATGGAAATCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS TCA 90 bp ACAGGAGCAGCCGCCATGACGCCCCAGACAGGACCTCAGAGGACCTaGTCTTCATTTGTATTGCAGCTCAGGTCTTTTTGTGAAATCTTG +
Preference number: 5 (lower is better)
Translates to: TGAAAMTPQTGPQRT*SSFVLQLRSFCEIL
Trigger: CAAGATTTCACAAAAAGACCTGAGCTGCAATACAAATGAAGATCAGGTCCTCTGAGGTCCTGTCTGGGGCGTCATGGCGGCTGCTCCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523271.1
CDS TCA 90 bp GCTAGTCCCAGCGCAGCAGGTGATTGTGTTAACACTCAAACCAACTaGACATATCACCCCTTCGCTCCAAAGCCTCCAACACTTCCCATC +
Preference number: 5 (lower is better)
Translates to: ASPSAAGDCVNTQTN*TYHPFAPKPPTLPI
Trigger: GATGGGAAGTGTTGGAGGCTTTGGAGCGAAGGGGTGATATGTTCAGTTGGTTTGAGTGTTAACACAATCACCTGCTGCGCTGGGACTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523271.1
CDS GCA 90 bp GAATGCTCGGTCTGGCTGATGACATTCTTGAGCTGGAGCAGGTCCTaGTTGGCGTTCTCAATGCTCTTCTTACAGGCTTCGATCTTCAGA +
Preference number: 5 (lower is better)
Translates to: ECSVWLMTFLSWSRS*LAFSMLFLQASIFR
Trigger: TCTGAAGATCGAAGCCTGTAAGAAGAGCATTGAGAACGCCAAGCAGGACCTGCTCCAGCTCAAGAATGTCATCAGCCAGACCGAGCATTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS GCA 90 bp TCCCTGGTCCGCCCATCAGCAGCAGGCATTATCATCCCCAGAGCCTaGTATCTTGTGTCAGGATTAGCACAGGACTTACTCTATTCTTGT +
Preference number: 5 (lower is better)
Translates to: SLVRPSAAGIIIPRA*YLVSGLAQDLLYSC
Trigger: ACAAGAATAGAGTAAGTCCTGTGCTAATCCTGACACAAGATAGCAGGCTCTGGGGATGATAATGCCTGCTGCTGATGGGCGGACCAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520940.1
CDS CCA 90 bp GGAGTGATGGGAGCCTCCTGTTTAGTTTATCTGAAGCATATTCCCTaGATGGTTGCTAATCCCTGGTCCGCCCATCAGCAGCAGGCATTA +
Preference number: 5 (lower is better)
Translates to: GVMGASCLVYLKHIP*MVANPWSAHQQQAL
Trigger: TAATGCCTGCTGCTGATGGGCGGACCAGGGATTAGCAACCATCCAGGGAATATGCTTCAGATAAACTAAACAGGAGGCTCCCATCACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520940.1
CDS-3UTR CAA 90 bp ACCAGGACAAACCTGAGCTTTTGTTCAGTTGCTAGAAAACTTCCAGAGTCAACTTTCAGCTCTTGGCGCTaGGCCTCCAGCTGCAGGAGC +
Preference number: 5 (lower is better)
Translates to: TRTNLSFCSVARKLPESTFSSWR*ASSCRS
Trigger: GCTCCTGCAGCTGGAGGCCAAGCGCCAAGAGCTGAA...AGTTGACTCTGGAAGTTTTCTAGCAACTGAACAAAAGCTCAGGTTTGTCCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CAA 90 bp ACTGGCTTAAGGCATGTGCATGACCAGGACAAACCTGAGCTTTTGTTCAGTTGCTTGAAGCACTTGGTCTaGTCATGGGGCAGGCGTGTC +
Preference number: 5 (lower is better)
Translates to: TGLRHVHDQDKPELLFSCLKHLV*SWGRRV
Trigger: GACACGCCTGCCCCATGACAAGACCAAGTGCTTCAA...GCAACTGAACAAAAGCTCAGGTTTGTCCTGGTCATGCACATGCCTTAAGCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS GCA 90 bp AAGGCAGGCGATGTCTGCATTTTCTGTAACATAAACGTTAGCTCGTaGTGTCGCCTGAAAAGCCTGCTTGACCAAGGGATCCAGGTAGCT +
Preference number: 5 (lower is better)
Translates to: KAGDVCIFCNINVSS*CRLKSLLDQGIQVA
Trigger: AGCTACCTGGATCCCTTGGTCAAGCAGGCTTTTCAGGCGACAGCACGAGCTAACGTTTATGTTACAGAAAATGCAGACATCGCCTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CAA 90 bp TCCCACAGCCAAGCACAAGATCTAGGCCTGTGGGCACCAACAGGATGGGGCTCTTCTTGTTTCTTGGTTTaGCTGACCAACAAATATGCA +
Preference number: 5 (lower is better)
Translates to: SHSQAQDLGLWAPTGWGSSCFLV*LTNKYA
Trigger: TGCATATTTGTTGGTCAGCAAAACCAAGAAACAAGA...AGAGCCCCATCCTGTTGGTGCCCACAGGCCTAGATCTTGTGCTTGGCTGTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CAA 90 bp ACTGGCTTAAGGCATGTGCATGACCAGGACAAACCTGAGCTTTTGTTCAGTTGCGGGATTTCCATGAAGTaGGGCTCAGACATGGCATGG +
Preference number: 5 (lower is better)
Translates to: TGLRHVHDQDKPELLFSCGISMK*GSDMAW
Trigger: CCATGCCATGTCTGAGCCCAACTTCATGGAAATCCC...GCAACTGAACAAAAGCTCAGGTTTGTCCTGGTCATGCACATGCCTTAAGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS TCA 90 bp GCCATAACCATGGGTTGCTATTCCACAAAACGATCTCTGTTTCACTaGCACGTTTCCAGAAGAGTTAGTGTGCTCCCCAGACAAGGCACC +
Preference number: 5 (lower is better)
Translates to: AITMGCYSTKRSLFH*HVSRRVSVLPRQGT
Trigger: GGTGCCTTGTCTGGGGAGCACACTAACTCTTCTGGAAACGTGTCAGTGAAACAGAGATCGTTTTGTGGAATAGCAACCCATGGTTATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220562.9
ENST00000519886.5
CDS TCA 90 bp CCTTCCTCTGACTTGTGTAGCATTACACCTCAGCACACGACTTCTTaGAAGAGTGAACCTCCAGGGCTTGCTCTCACCTTCATTTCTCCT +
Preference number: 5 (lower is better)
Translates to: PSSDLCSITPQHTTS*KSEPPGLALTFISP
Trigger: AGGAGAAATGAAGGTGAGAGCAAGCCCTGGAGGTTCACTCTTTCAAGAAGTCGTGTGCTGAGGTGTAATGCTACACAAGTCAGAGGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518223.1
CDS TCA 90 bp ATTAGGGTGAGAATACTTAACACACAGGGTTGTTTTGAGGCTAAATaGGATACGAGGCCTGGTATACAGCAGGTGTGCAGTCGCGGTCGC +
Preference number: 5 (lower is better)
Translates to: IRVRILNTQGCFEAK*DTRPGIQQVCSRGR
Trigger: GCGACCGCGACTGCACACCTGCTGTATACCAGGCCTCGTATCTCATTTAGCCTCAAAACAACCCTGTGTGTTAAGTATTCTCACCCTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522725.5
CDS GCA 90 bp CAGACCTCAATAAATCACAGAACCATGAAACACACGATCCCTCACTaGCTCCTGTACAGATTCTTGAGTCTGGTCAGTACTCGCCATCGG +
Preference number: 5 (lower is better)
Translates to: QTSINHRTMKHTIPH*LLYRFLSLVSTRHR
Trigger: CCGATGGCGAGTACTGACCAGACTCAAGAATCTGTACAGGAGGCAGTGAGGGATCGTGTGTTTCATGGTTCTGTGATTTATTGAGGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523271.1
CDS-3UTR CAA 90 bp GGAGTGGAAAGTGGTAACTCGGGTTGTGAATGCCCGTTAGATTCCAAGGCTGGACTTCTTATGATGCCTTaGCCAACAATCAGGCCATGT +
Preference number: 5 (lower is better)
Translates to: GVESGNSGCECPLDSKAGLLMMP*PTIRPC
Trigger: ACATGGCCTGATTGTTGGCAAAGGCATCATAAGAAG...TCCAGCCTTGGAATCTAACGGGCATTCACAACCCGAGTTACCACTTTCCACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CAA 90 bp GACCGTAAGTCCAAGACACAACTCGACAGGTATAGACTCAAAGCAGACATCATATGGCTGATGACATTCTaGAGCTGGAGCAGGTCCTGC +
Preference number: 5 (lower is better)
Translates to: DRKSKTQLDRYRLKADIIWLMTF*SWSRSC
Trigger: GCAGGACCTGCTCCAGCTCAAGAATGTCATCAGCCA...TATGATGTCTGCTTTGAGTCTATACCTGTCGAGTTGTGTCTTGGACTTACGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CAA 90 bp GCTCACCGAGTCCCACTGAAGTCAGTATGTGAGTTCCTCACATTAAAAGAAACCTTGATGATGACATGGTaGTGTCCATCCGTCCGCCAG +
Preference number: 5 (lower is better)
Translates to: AHRVPLKSVCEFLTLKETLMMTW*CPSVRQ
Trigger: CTGGCGGACGGATGGACACAACCATGTCATCATCAA...GGTTTCTTTTAATGTGAGGAACTCACATACTGACTTCAGTGGGACTCGGTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CAA 90 bp CATGATTTCGTCATGGCGGAGGTGAGCATCGTCATCAATGGACAGGATGGCCTCCAGGGTAAGAATCGGTaGTTCAAACTGTTCTTCTCA +
Preference number: 5 (lower is better)
Translates to: HDFVMAEVSIVINGQDGLQGKNR*FKLFFS
Trigger: TGAGAAGAACAGTTTGAACAACCGATTCTTACCCTG...GAGGCCATCCTGTCCATTGATGACGATGCTCACCTCCGCCATGACGAAATCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522698.1
CDS CCA 90 bp GTTACAAGACACAGGTTGTTGGCTTTCAGCCAAAATATGCATGGATaGAGGGGCTGTTTGGGTGTGGCAGTAACTAGGAGGTATTACTGG +
Preference number: 5 (lower is better)
Translates to: VTRHRLLAFSQNMHG*RGCLGVAVTRRYYW
Trigger: CCAGTAATACCTCCTAGTTACTGCCACACCCAAACAGCCCCTCCATCCATGCATATTTTGGCTGAAAGCCAACAACCTGTGTCTTGTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523271.1
CDS-3UTR CAA 90 bp TCAACAGAAGAGCAGGATAGAAAGAGCCATCTGGGAGTGGCGTCTTCAGCCCCTCATAGCTCTTGTTTCTaGGTTTTGCTGACCAACAAA +
Preference number: 5 (lower is better)
Translates to: STEEQDRKSHLGVASSAPHSSCF*VLLTNK
Trigger: TTTGTTGGTCAGCAAAACCAAGAAACAAGAGCTATG...AGGGGCTGAAGACGCCACTCCCAGATGGCTCTTTCTATCCTGCTCTTCTGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS TCA 90 bp CCTTCCTCTGACTTGTGTAGCATTACACCTCAGCACACGACTTCTTaGAAGAGTGAACCTCCAGGGCTTGCTCTCTTGCTTTTAAAGATG +
Preference number: 5 (lower is better)
Translates to: PSSDLCSITPQHTTS*KSEPPGLALLLLKM
Trigger: CATCTTTAAAAGCAAGAGAGCAAGCCCTGGAGGTTCACTCTTTCAAGAAGTCGTGTGCTGAGGTGTAATGCTACACAAGTCAGAGGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454906.6
CDS GCA 90 bp CTTCTCAGTACGGACCACACCTTCATTTCTCCTATCAAAGTGTCTTaGGTTCTCACCCATGCTGTGCACCTCATATTAAGTCAGTCTGCA +
Preference number: 5 (lower is better)
Translates to: LLSTDHTFISPIKVS*VLTHAVHLILSQSA
Trigger: TGCAGACTGACTTAATATGAGGTGCACAGCATGGGTGAGAACGCAAGACACTTTGATAGGAGAAATGAAGGTGTGGTCCGTACTGAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521532.5
CDS-3UTR CAA 90 bp GCTCACCGAGTCCCACTGAAGTCAGTATGTGAGTTCCTCACATTAAAAGAAACCCGCCATAACCATGGGTaGCTATTCCACAAAACGATC +
Preference number: 5 (lower is better)
Translates to: AHRVPLKSVCEFLTLKETRHNHG*LFHKTI
Trigger: GATCGTTTTGTGGAATAGCAACCCATGGTTATGGCG...GGTTTCTTTTAATGTGAGGAACTCACATACTGACTTCAGTGGGACTCGGTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CAA 90 bp ACCAGGACAAACCTGAGCTTTTGTTCAGTTGCTAGAAAACTTCCAGAGTCAACTTTCATCCCTTTCTGGTaGCTGCACACAGATGGCGCT +
Preference number: 5 (lower is better)
Translates to: TRTNLSFCSVARKLPESTFIPFW*LHTDGA
Trigger: AGCGCCATCTGTGTGCAGCAACCAGAAAGGGATGAA...AGTTGACTCTGGAAGTTTTCTAGCAACTGAACAAAAGCTCAGGTTTGTCCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS GCA 90 bp CCACACCTTCATTTCTCCTATCAAAGTGTCTTGCGTTCTCACCCATaGTGTGCACCTCATATTAAGTCAGTCTGCATTTTACACTTCCTG +
Preference number: 5 (lower is better)
Translates to: PHLHFSYQSVLRSHP*CAPHIKSVCILHFL
Trigger: CAGGAAGTGTAAAATGCAGACTGACTTAATATGAGGTGCACAGCATGGGTGAGAACGCAAGACACTTTGATAGGAGAAATGAAGGTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521532.5
CDS-3UTR CAA 90 bp AAATTAACTTTGCATATATGGGCCACATGCCCTTCCACATCCTGCTTAAAGCACGCTTCAAAACAGTACTaGAAGAGGACCCACGTGGTA +
Preference number: 5 (lower is better)
Translates to: KLTLHIWATCPSTSCLKHASKQY*KRTHVV
Trigger: TACCACGTGGGTCCTCTTCAAGTACTGTTTTGAAGC...GTGCTTTAAGCAGGATGTGGAAGGGCATGTGGCCCATATATGCAAAGTTAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS GCA 90 bp TCTCACCTTCATTTCTCCTATCAAAGTGTCTTGCGTTCTCACCCATaGTGTGCACCTCATATTAAGTCAGTCTGCATTTTACACTTCCTG +
Preference number: 5 (lower is better)
Translates to: SHLHFSYQSVLRSHP*CAPHIKSVCILHFL
Trigger: CAGGAAGTGTAAAATGCAGACTGACTTAATATGAGGTGCACAGCATGGGTGAGAACGCAAGACACTTTGATAGGAGAAATGAAGGTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518223.1
CDS-3UTR CAA 90 bp ACCAGGACAAACCTGAGCTTTTGTTCAGTTGCTAGAAAACTTCCAGAGTCAACTGACTTACGTGACAGATaGATGATGACATGGTTGTGT +
Preference number: 5 (lower is better)
Translates to: TRTNLSFCSVARKLPESTDLRDR*MMTWLC
Trigger: ACACAACCATGTCATCATCAATCTGTCACGTAAGTC...AGTTGACTCTGGAAGTTTTCTAGCAACTGAACAAAAGCTCAGGTTTGTCCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS-3UTR CAA 90 bp ACCAGGACAAACCTGAGCTTTTGTTCAGTTGCTAGAAAACTTCCAGAGTCAACTGTGACCCTCTTCACTTaGTCAAAGCATTCATTCATG +
Preference number: 5 (lower is better)
Translates to: TRTNLSFCSVARKLPESTVTLFT*SKHSFM
Trigger: CATGAATGAATGCTTTGACAAAGTGAAGAGGGTCAC...AGTTGACTCTGGAAGTTTTCTAGCAACTGAACAAAAGCTCAGGTTTGTCCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS TCA 90 bp TCAGAGGACCTGATCTTCATTTGTATTGCAGCTCAGGTCTTTTTGTaGAATCTTGTGATTTTTAGAAGTTGTCAGTGCATAGGACAACAC +
Preference number: 5 (lower is better)
Translates to: SEDLIFICIAAQVFL*NLVIFRSCQCIGQH
Trigger: GTGTTGTCCTATGCACTGACAACTTCTAAAAATCACAAGATTTCACAAAAAGACCTGAGCTGCAATACAAATGAAGATCAGGTCCTCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000523271.1
CDS GCA 72 bp CCAGCTCAGGGACCCGCCGCCGCCGCCGCCGCCGCCTaGGCGAAAGTCGGCGTCCCAGAAGCCGTTCTGGCT +
Preference number: 6 (lower is better)
Translates to: PAQGPAAAAAAA*AKVGVPEAVLA
Trigger: AGCCAGAACGGCTTCTGGGACGCCGACTTTCGCGCAGGCGGCGGCGGCGGCGGCGGCGGGTCCCTGAGCTGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS GCA 72 bp CTGCGCGAAAGTCGGCGTCCCAGAAGCCGTTCTGGCTaGCGGCCGCCCGCCTTCCAGGCCGCGCCTGATCCG +
Preference number: 6 (lower is better)
Translates to: LRESRRPRSRSG*RPPAFQAAPDP
Trigger: CGGATCAGGCGCGGCCTGGAAGGCGGGCGGCCGGCAGCCAGAACGGCTTCTGGGACGCCGACTTTCGCGCAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS GCA 72 bp CTCACCGACTCCCGGATGCGGCACAGATCCAGCACGTaGTTCACCTCGCACAGCTCGTTCCCCACCCGGGGA +
Preference number: 6 (lower is better)
Translates to: LTDSRMRHRSST*FTSHSSFPTRG
Trigger: TCCCCGGGTGGGGAACGAGCTGTGCGAGGTGAAGCACGTGCTGGATCTGTGCCGCATCCGGGAGTCGGTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS TCA 72 bp GTCAGCCATGTTGGGGTCAGTTCCAGCCGCCTTGCCTaGACGGTGGGGGATCTCAGCTGCCGCCTCTTCCCG +
Preference number: 6 (lower is better)
Translates to: VSHVGVSSSRLA*TVGDLSCRLFP
Trigger: CGGGAAGAGGCGGCAGCTGAGATCCCCCACCGTTCAGGCAAGGCGGCTGGAACTGACCCCAACATGGCTGAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000220562.9
ENST00000523149.5
CDS GCA 72 bp TGTCCATCCGTCCGCCAGTGTGGCAGGGAATACAACTaGTTCTCCAGCTCAGCAGGCCGCAGCACCACCGGC +
Preference number: 6 (lower is better)
Translates to: CPSVRQCGREYN*FSSSAGRSTTG
Trigger: GCCGGTGGTGCTGCGGCCTGCTGAGCTGGAGAAGCAGTTGTATTCCCTGCCACACTGGCGGACGGATGGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220562.9
ENST00000522698.1
CDS CCA 72 bp ATGTTGGGGTCAGTTCCAGCCGCCTTGCCTGAACGGTaGGGGATCTCAGCTGCCGCCTCTTCCCGGATGGGA +
Preference number: 6 (lower is better)
Translates to: MLGSVPAALPER*GISAAASSRMG
Trigger: TCCCATCCGGGAAGAGGCGGCAGCTGAGATCCCCCACCGTTCAGGCAAGGCGGCTGGAACTGACCCCAACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220562.9
ENST00000523149.5
CDS CCA 72 bp GAGCCACAGGCAGGTAAGCGCATGAAGGCCCCATCATaGGCCTCAACTACAGGAGCAGCCGCCATGACGCCC +
Preference number: 6 (lower is better)
Translates to: EPQAGKRMKAPS*ASTTGAAAMTP
Trigger: GGGCGTCATGGCGGCTGCTCCTGTAGTTGAGGCCCATGATGGGGCCTTCATGCGCTTACCTGCCTGTGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523271.1
CDS GCA 72 bp CCAGCTGCAGGAGCTCTTCACTCACCGACTCCCGGATaGGGCACAGATCCAGCACGTGCTTCACCTCGCACA +
Preference number: 6 (lower is better)
Translates to: PAAGALHSPTPG*GTDPARASPRT
Trigger: TGTGCGAGGTGAAGCACGTGCTGGATCTGTGCCGCATCCGGGAGTCGGTGAGTGAAGAGCTCCTGCAGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS GCA 72 bp ATCTCGCTGTTCAGCTCTTGGCGCTTGGCCTCCAGCTaGAGGAGCTCTTCACTCACCGACTCCCGGATGCGG +
Preference number: 6 (lower is better)
Translates to: ISLFSSWRLASS*RSSSLTDSRMR
Trigger: CCGCATCCGGGAGTCGGTGAGTGAAGAGCTCCTGCAGCTGGAGGCCAAGCGCCAAGAGCTGAACAGCGAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS GCA 72 bp CAGCAATTCCAAGCGGTCCTCCCGCTCTCCACACAGTaGCCACTCAGTCGGCAGGCTGGGTTTGGGCTGGTT +
Preference number: 6 (lower is better)
Translates to: QQFQAVLPLSTQ*PLSRQAGFGLV
Trigger: AACCAGCCCAAACCCAGCCTGCCGACTGAGTGGGCACTGTGTGGAGAGCGGGAGGACCGCTTGGAATTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220562.9
ENST00000523149.5
CDS TCA 72 bp AGTGACAGTCAGAGTGAAATTGCGGAGGTATCTGGGTaGGGCGTAGGGCGGCTCCGTCTCCACTGGCCCCAG +
Preference number: 6 (lower is better)
Translates to: SDSQSEIAEVSG*GVGRLRLHWPQ
Trigger: CTGGGGCCAGTGGAGACGGAGCCGCCCTACGCCTCACCCAGATACCTCCGCAATTTCACTCTGACTGTCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220562.9
ENST00000523149.5
CDS TCA 72 bp CCCCATCATGGGCCTCAACTACAGGAGCAGCCGCCATaGCGCCCCAGACAGGACCTCAGAGGACCTGATCTT +
Preference number: 6 (lower is better)
Translates to: PHHGPQLQEQPP*RPRQDLRGPDL
Trigger: AAGATCAGGTCCTCTGAGGTCCTGTCTGGGGCGTCATGGCGGCTGCTCCTGTAGTTGAGGCCCATGATGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523271.1
CDS GCA 72 bp GACGGCACCGACTTCCAGGGCTTCGAAGAGCCGTGTTaGACACCCAGAGGAAATAACCAAGCGAGGGTCCCC +
Preference number: 6 (lower is better)
Translates to: DGTDFQGFEEPC*TPRGNNQARVP
Trigger: GGGGACCCTCGCTTGGTTATTTCCTCTGGGTGTGCAACACGGCTCTTCGAAGCCCTGGAAGTCGGTGCCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220562.9
ENST00000523149.5
CDS CCA 72 bp AATAATCAAAGCAGTTGTGTAGCCGGCAGCCCCGAGTaGCCTTCGGGGGAGGGAGGCCGGCATCGTCCTTCT +
Preference number: 6 (lower is better)
Translates to: NNQSSCVAGSPE*PSGEGGRHRPS
Trigger: AGAAGGACGATGCCGGCCTCCCTCCCCCGAAGGCCACTCGGGGCTGCCGGCTACACAACTGCTTTGATTATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS CCA 72 bp GATCTCAGCTGCCGCCTCTTCCCGGATGGGAGCGGCTaGGATCTGGATGCGAGTCCTAATCATAGCCAGCAC +
Preference number: 6 (lower is better)
Translates to: DLSCRLFPDGSG*DLDASPNHSQH
Trigger: GTGCTGGCTATGATTAGGACTCGCATCCAGATCCCAGCCGCTCCCATCCGGGAAGAGGCGGCAGCTGAGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220562.9
ENST00000523149.5
CDS CAA 90 bp TCCTCCCGCTCTCCACACAGTGCCCACTCAGTCGGCAGGCTGGGTTaGGGCTGGTTTTTGCAGGTGAATTCCACCAGGACCCTTCCTTCC +
Preference number: 6 (lower is better)
Translates to: SSRSPHSAHSVGRLG*GWFLQVNSTRTLPS
Trigger: GGAAGGAAGGGTCCTGGTGGAATTCACCTGCAAAAACCAGCCCAAACCCAGCCTGCCGACTGAGTGGGCACTGTGTGGAGAGCGGGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523149.5
CDS GCA 72 bp CGTGAACTGCTCTCGGGGAACATTGCCTCCAAGCGCTaGCTGAAATTCCTTGCCAGAACCCCCAGCTCCACC +
Preference number: 6 (lower is better)
Translates to: RELLSGNIASKR*LKFLARTPSST
Trigger: GGTGGAGCTGGGGGTTCTGGCAAGGAATTTCAGGCAGCGCTTGGAGGCAATGTTCCCCGAGAGCAGTTCACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000220562.9
ENST00000523149.5
CDS CCA 72 bp GCTGCCGCCTCTTCCCGGATGGGAGCGGCTGGGATCTaGATGCGAGTCCTAATCATAGCCAGCACGGTATTA +
Preference number: 6 (lower is better)
Translates to: AAASSRMGAAGI*MRVLIIASTVL
Trigger: TAATACCGTGCTGGCTATGATTAGGACTCGCATCCAGATCCCAGCCGCTCCCATCCGGGAAGAGGCGGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220562.9
ENST00000523149.5
CDS CAA 90 bp ATCTTCAGATTCAGCTTGGCGATCTCGCTGTTCAGCTCTTGGCGCTaGGCCTCCAGCTGCAGGAGCTCTTCACTCACCGACTCCCGGATG +
Preference number: 6 (lower is better)
Translates to: IFRFSLAISLFSSWR*ASSCRSSSLTDSRM
Trigger: CATCCGGGAGTCGGTGAGTGAAGAGCTCCTGCAGCTGGAGGCCAAGCGCCAAGAGCTGAACAGCGAGATCGCCAAGCTGAATCTGAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS CAA 90 bp GGCTTCGATCTTCAGATTCAGCTTGGCGATCTCGCTGTTCAGCTCTaGGCGCTTGGCCTCCAGCTGCAGGAGCTCTTCACTCACCGACTC +
Preference number: 6 (lower is better)
Translates to: GFDLQIQLGDLAVQL*ALGLQLQELFTHRL
Trigger: GAGTCGGTGAGTGAAGAGCTCCTGCAGCTGGAGGCCAAGCGCCAAGAGCTGAACAGCGAGATCGCCAAGCTGAATCTGAAGATCGAAGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS CAA 90 bp GCTCCACCACCAATAGGCCGAAAGCCAGTCCCTGAGCCCAAGAATTaGGCCTCTGAGGGCAACACAGGGTCAAAGGGAGTGTGGGGGAAA +
Preference number: 6 (lower is better)
Translates to: APPPIGRKPVPEPKN*ASEGNTGSKGVWGK
Trigger: TTTCCCCCACACTCCCTTTGACCCTGTGTTGCCCTCAGAGGCCAAATTCTTGGGCTCAGGGACTGGCTTTCGGCCTATTGGTGGTGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000220562.9
ENST00000523149.5
CDS TCA 72 bp TCGCCCTCCATTTCCTCTTCGAAGGAGCGGGCCTCCTaGAGGCTAGACCTCAGAGACTCAATCTTCTCGCCC +
Preference number: 6 (lower is better)
Translates to: SPSISSSKERAS*RLDLRDSIFSP
Trigger: GGGCGAGAAGATTGAGTCTCTGAGGTCTAGCCTTCAGGAGGCCCGCTCCTTCGAAGAGGAAATGGAGGGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS TCA 72 bp AACTGCTCTCGGGGAACATTGCCTCCAAGCGCTGCCTaGAATTCCTTGCCAGAACCCCCAGCTCCACCACCA +
Preference number: 6 (lower is better)
Translates to: NCSRGTLPPSAA*NSLPEPPAPPP
Trigger: TGGTGGTGGAGCTGGGGGTTCTGGCAAGGAATTTCAGGCAGCGCTTGGAGGCAATGTTCCCCGAGAGCAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000220562.9
ENST00000523149.5
CDS TCA 72 bp GATGGGGACGCCAATGTCAGGCCACAGAAGGTCCTCTaGTGGCAGCTTGGGAGAATTCCACACCACCACGAC +
Preference number: 6 (lower is better)
Translates to: DGDANVRPQKVL*WQLGRIPHHHD
Trigger: GTCGTGGTGGTGTGGAATTCTCCCAAGCTGCCATCAGAGGACCTTCTGTGGCCTGACATTGGCGTCCCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220562.9
ENST00000521473.5
ENST00000523149.5
CDS CCA 72 bp CACAGTGCCCACTCAGTCGGCAGGCTGGGTTTGGGCTaGTTTTTGCAGGTGAATTCCACCAGGACCCTTCCT +
Preference number: 6 (lower is better)
Translates to: HSAHSVGRLGLG*FLQVNSTRTLP
Trigger: AGGAAGGGTCCTGGTGGAATTCACCTGCAAAAACCAGCCCAAACCCAGCCTGCCGACTGAGTGGGCACTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523149.5
CDS CAA 72 bp TCTCCACACAGTGCCCACTCAGTCGGCAGGCTGGGTTaGGGCTGGTTTTTGCAGGTGAATTCCACCAGGACC +
Preference number: 6 (lower is better)
Translates to: SPHSAHSVGRLG*GWFLQVNSTRT
Trigger: GGTCCTGGTGGAATTCACCTGCAAAAACCAGCCCAAACCCAGCCTGCCGACTGAGTGGGCACTGTGTGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000220562.9
ENST00000523149.5
CDS TCA 72 bp ATTTCCGCTTCACCGGCACCTGTGGTGGGATTTCCATaGAGTTGGGCTCAGACATGGCATGGACCAGCGGTG +
Preference number: 6 (lower is better)
Translates to: ISASPAPVVGFP*SWAQTWHGPAV
Trigger: CACCGCTGGTCCATGCCATGTCTGAGCCCAACTTCATGGAAATCCCACCACAGGTGCCGGTGAAGCGGAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS TCA 72 bp GCACTTCCTCCCGCTCATAAGTCAACATCACCACCGTaGACTGCTCTCGGGGAACATTGCCTCCAAGCGCTG +
Preference number: 6 (lower is better)
Translates to: ALPPAHKSTSPP*TALGEHCLQAL
Trigger: CAGCGCTTGGAGGCAATGTTCCCCGAGAGCAGTTCACGGTGGTGATGTTGACTTATGAGCGGGAGGAAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220562.9
ENST00000523149.5
CDS CCA 72 bp TTCAGATTCAGCTTGGCGATCTCGCTGTTCAGCTCTTaGCGCTTGGCCTCCAGCTGCAGGAGCTCTTCACTC +
Preference number: 6 (lower is better)
Translates to: FRFSLAISLFSS*RLASSCRSSSL
Trigger: GAGTGAAGAGCTCCTGCAGCTGGAGGCCAAGCGCCAAGAGCTGAACAGCGAGATCGCCAAGCTGAATCTGAA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS CCA 72 bp TCTGACAGTCTCTCCTGTCTCCATAAAGTAGCGGGCTaGCTCTTTGCTGGGAGTGATGGGAGCCTGGGAGGT +
Preference number: 6 (lower is better)
Translates to: SDSLSCLHKVAG*LFAGSDGSLGG
Trigger: ACCTCCCAGGCTCCCATCACTCCCAGCAAAGAGCCAGCCCGCTACTTTATGGAGACAGGAGAGACTGTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519288.5
CDS CCA 72 bp CTCAGACTGTCCTACAAGGCCCACAGAGGGGTGTGTTaGAGCCACTCACACCTGCTCATGAATGGCGCTTTC +
Preference number: 6 (lower is better)
Translates to: LRLSYKAHRGVC*SHSHLLMNGAF
Trigger: GAAAGCGCCATTCATGAGCAGGTGTGAGTGGCTCCAACACACCCCTCTGTGGGCCTTGTAGGACAGTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523271.1
CDS CCA 72 bp AGATTCTTGAGTCTGGTCAGTACTCGCCATCGGCCCTaGCTACTCCCTGCTGCCAACCACCTTCGTCTCTTG +
Preference number: 6 (lower is better)
Translates to: RFLSLVSTRHRP*LLPAANHLRLL
Trigger: CAAGAGACGAAGGTGGTTGGCAGCAGGGAGTAGCCAGGGCCGATGGCGAGTACTGACCAGACTCAAGAATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523271.1
CDS CAA 72 bp AGCAGTGGAGAAGTAAGTCTCCCAGAGAAAGCGGCCTaGCCGCCTCATAGCCAGGAGGTCACTATCGGAGAG +
Preference number: 6 (lower is better)
Translates to: SSGEVSLPEKAA*PPHSQEVTIGE
Trigger: CTCTCCGATAGTGACCTCCTGGCTATGAGGCGGCAAGGCCGCTTTCTCTGGGAGACTTACTTCTCCACTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220562.9
ENST00000523149.5
CDS CAA 72 bp CCAATAGGCCGAAAGCCAGTCCCTGAGCCCAAGAATTaGGCCTCTGAGGGCAACACAGGGTCAAAGGGAGTG +
Preference number: 6 (lower is better)
Translates to: PIGRKPVPEPKN*ASEGNTGSKGV
Trigger: CACTCCCTTTGACCCTGTGTTGCCCTCAGAGGCCAAATTCTTGGGCTCAGGGACTGGCTTTCGGCCTATTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220562.9
ENST00000523149.5
CDS TCA 72 bp AGGAGGTCACTATCGGAGAGGCTTCTGAGCAGGAAATaGACCTCGGTAACACGAGGCTTTGGCACCACCAGG +
Preference number: 6 (lower is better)
Translates to: RRSLSERLLSRK*TSVTRGFGTTR
Trigger: CCTGGTGGTGCCAAAGCCTCGTGTTACCGAGGTTCATTTCCTGCTCAGAAGCCTCTCCGATAGTGACCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220562.9
ENST00000523149.5
CDS TCA 72 bp GGAGGGGCATGTAGCCGTACACCTTCACGAAGAAGTTaGTGCACTTGTGCCGCTCGTGGAAGTGGGAGTCAT +
Preference number: 6 (lower is better)
Translates to: GGACSRTPSRRS*CTCAARGSGSH
Trigger: ATGACTCCCACTTCCACGAGCGGCACAAGTGCATCAACTTCTTCGTGAAGGTGTACGGCTACATGCCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000220562.9
ENST00000520679.1
ENST00000521473.5
ENST00000523149.5
ENST00000523271.1
CDS TCA 72 bp GTAAGAAAAACGAGGAGCCACAGGCAGGTAAGCGCATaGAGGCCCCATCATGGGCCTCAACTACAGGAGCAG +
Preference number: 6 (lower is better)
Translates to: VRKTRSHRQVSA*RPHHGPQLQEQ
Trigger: CTGCTCCTGTAGTTGAGGCCCATGATGGGGCCTTCATGCGCTTACCTGCCTGTGGCTCCTCGTTTTTCTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523271.1
CDS TCA 72 bp AACACACGATCCCTCACTGCCTCCTGTACAGATTCTTaGGTCTGGTCAGTACTCGCCATCGGCCCTGGCTAC +
Preference number: 6 (lower is better)
Translates to: NTRSLTASCTDS*VWSVLAIGPGY
Trigger: GTAGCCAGGGCCGATGGCGAGTACTGACCAGACTCAAGAATCTGTACAGGAGGCAGTGAGGGATCGTGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523271.1
CDS GCA 72 bp CGGCGACTATGCCACAGATACGTGCATGGAAGTTACTaGCTCGAGCCTGTGCTTAGCAGTCGTTTCGGAGGA +
Preference number: 6 (lower is better)
Translates to: RRLCHRYVHGSY*LEPVLSSRFGG
Trigger: TCCTCCGAAACGACTGCTAAGCACAGGCTCGAGGCAGTAACTTCCATGCACGTATCTGTGGCATAGTCGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522725.5
CDS CAA 72 bp TCTCAGACTGTCCTACAAGGCCCACAGAGGGGTGTGTaGGAGCCACTCACACCTGCTCATGAATGGCGCTTT +
Preference number: 6 (lower is better)
Translates to: SQTVLQGPQRGV*EPLTPAHEWRF
Trigger: AAAGCGCCATTCATGAGCAGGTGTGAGTGGCTCCAACACACCCCTCTGTGGGCCTTGTAGGACAGTCTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523271.1
CDS CAA 90 bp GCGTTCTCAATGCTCTTCTTACAGGCTTCGATCTTCAGATTCAGCTaGGCGATCTCGCTGTTCAGCTCTTGGCGCTTGGCCTCCAGCTGC +
Preference number: 6 (lower is better)
Translates to: AFSMLFLQASIFRFS*AISLFSSWRLASSC
Trigger: GCAGCTGGAGGCCAAGCGCCAAGAGCTGAACAGCGAGATCGCCAAGCTGAATCTGAAGATCGAAGCCTGTAAGAAGAGCATTGAGAACGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS CAA 90 bp AATACTGTCAGCAGTGGAGAAGTAAGTCTCCCAGAGAAAGCGGCCTaGCCGCCTCATAGCCAGGAGGTCACTATCGGAGAGGCTTCTGAG +
Preference number: 6 (lower is better)
Translates to: NTVSSGEVSLPEKAA*PPHSQEVTIGEASE
Trigger: CTCAGAAGCCTCTCCGATAGTGACCTCCTGGCTATGAGGCGGCAAGGCCGCTTTCTCTGGGAGACTTACTTCTCCACTGCTGACAGTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220562.9
ENST00000523149.5
CDS TCA 72 bp CATGAAGTTGGGCTCAGACATGGCATGGACCAGCGGTaGTACGACCAAGTCAAAGCCAGGTCTGTACTGGAC +
Preference number: 6 (lower is better)
Translates to: HEVGLRHGMDQR*YDQVKARSVLD
Trigger: GTCCAGTACAGACCTGGCTTTGACTTGGTCGTATCACCGCTGGTCCATGCCATGTCTGAGCCCAACTTCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS GCA 72 bp CCACTCAGCAGCAGATACAGCAGTTTCCGGCGACTATaGCACAGATACGTGCATGGAAGTTACTGCCTCGAG +
Preference number: 6 (lower is better)
Translates to: PLSSRYSSFRRL*HRYVHGSYCLE
Trigger: CTCGAGGCAGTAACTTCCATGCACGTATCTGTGGCATAGTCGCCGGAAACTGCTGTATCTGCTGCTGAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522725.5
CDS CCA 72 bp GGTGGGATTTCCATGAAGTTGGGCTCAGACATGGCATaGACCAGCGGTGATACGACCAAGTCAAAGCCAGGT +
Preference number: 6 (lower is better)
Translates to: GGISMKLGSDMA*TSGDTTKSKPG
Trigger: ACCTGGCTTTGACTTGGTCGTATCACCGCTGGTCCATGCCATGTCTGAGCCCAACTTCATGGAAATCCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS CCA 72 bp TCTGACAGTCTCTCCTGTCTCCATAAAGTAGCGGGCTaGCTCTTTGCTGGGAGTGATGGGAGCCTCCTGTTT +
Preference number: 6 (lower is better)
Translates to: SDSLSCLHKVAG*LFAGSDGSLLF
Trigger: AAACAGGAGGCTCCCATCACTCCCAGCAAAGAGCCAGCCCGCTACTTTATGGAGACAGGAGAGACTGTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520940.1
CDS CAA 72 bp CAGTACGGACCACGTGACAGATTGATGATGACATGGTaGTGTCCATCCGTCCGCCAGTGTGGCAGGGAATAC +
Preference number: 6 (lower is better)
Translates to: QYGPRDRLMMTW*CPSVRQCGREY
Trigger: GTATTCCCTGCCACACTGGCGGACGGATGGACACAACCATGTCATCATCAATCTGTCACGTGGTCCGTACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522698.1
CDS CAA 90 bp AGATATTTCCGCTTCACCGGCACCTGTGGTGGGATTTCCATGAAGTaGGGCTCAGACATGGCATGGACCAGCGGTGATACGACCAAGTCA +
Preference number: 6 (lower is better)
Translates to: RYFRFTGTCGGISMK*GSDMAWTSGDTTKS
Trigger: TGACTTGGTCGTATCACCGCTGGTCCATGCCATGTCTGAGCCCAACTTCATGGAAATCCCACCACAGGTGCCGGTGAAGCGGAAATATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS TCA 72 bp GCCGCCATGACGCCCCAGACAGGACCTCAGAGGACCTaGTCTTCATTTGTATTGCAGCTCAGGTCTTTTTGT +
Preference number: 6 (lower is better)
Translates to: AAMTPQTGPQRT*SSFVLQLRSFC
Trigger: ACAAAAAGACCTGAGCTGCAATACAAATGAAGATCAGGTCCTCTGAGGTCCTGTCTGGGGCGTCATGGCGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523271.1
CDS GCA 72 bp GTCTGGCTGATGACATTCTTGAGCTGGAGCAGGTCCTaGTTGGCGTTCTCAATGCTCTTCTTACAGGCTTCG +
Preference number: 6 (lower is better)
Translates to: VWLMTFLSWSRS*LAFSMLFLQAS
Trigger: CGAAGCCTGTAAGAAGAGCATTGAGAACGCCAAGCAGGACCTGCTCCAGCTCAAGAATGTCATCAGCCAGAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS GCA 72 bp GATACAGCAGTTTCCGGCGACTATGCCACAGATACGTaGATGGAAGTTACTGCCTCGAGCCTGTGCTTAGCA +
Preference number: 6 (lower is better)
Translates to: DTAVSGDYATDT*MEVTASSLCLA
Trigger: TGCTAAGCACAGGCTCGAGGCAGTAACTTCCATGCACGTATCTGTGGCATAGTCGCCGGAAACTGCTGTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522725.5
CDS GCA 72 bp CGCCCATCAGCAGCAGGCATTATCATCCCCAGAGCCTaGTATCTTGTGTCAGGATTAGCACAGGACTTACTC +
Preference number: 6 (lower is better)
Translates to: RPSAAGIIIPRA*YLVSGLAQDLL
Trigger: GAGTAAGTCCTGTGCTAATCCTGACACAAGATAGCAGGCTCTGGGGATGATAATGCCTGCTGCTGATGGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520940.1
CDS CCA 72 bp TGCTCTTCTTACAGGCTTCGATCTTCAGATTCAGCTTaGCGATCTCGCTGTTCAGCTCTTGGCGCTTGGCCT +
Preference number: 6 (lower is better)
Translates to: CSSYRLRSSDSA*RSRCSALGAWP
Trigger: AGGCCAAGCGCCAAGAGCTGAACAGCGAGATCGCCAAGCTGAATCTGAAGATCGAAGCCTGTAAGAAGAGCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS CCA 72 bp GGTGAAGAGATATTTCCGCTTCACCGGCACCTGTGGTaGGATTTCCATGAAGTTGGGCTCAGACATGGCATG +
Preference number: 6 (lower is better)
Translates to: GEEIFPLHRHLW*DFHEVGLRHGM
Trigger: CATGCCATGTCTGAGCCCAACTTCATGGAAATCCCACCACAGGTGCCGGTGAAGCGGAAATATCTCTTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS CCA 72 bp GAAGGTGAAGAGATATTTCCGCTTCACCGGCACCTGTaGTGGGATTTCCATGAAGTTGGGCTCAGACATGGC +
Preference number: 6 (lower is better)
Translates to: EGEEIFPLHRHL*WDFHEVGLRHG
Trigger: GCCATGTCTGAGCCCAACTTCATGGAAATCCCACCACAGGTGCCGGTGAAGCGGAAATATCTCTTCACCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS CCA 72 bp TCACCTTGTGAAAGAAGGCAGCACCTGTCAGCACCATaGACAGCTCACAGGAGTAGTTGGAGTTGTAGAGCC +
Preference number: 6 (lower is better)
Translates to: SPCERRQHLSAP*TAHRSSWSCRA
Trigger: GGCTCTACAACTCCAACTACTCCTGTGAGCTGTCCATGGTGCTGACAGGTGCTGCCTTCTTTCACAAGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521473.5
CDS CAA 72 bp ATGCTCTTCTTACAGGCTTCGATCTTCAGATTCAGCTaGGCGATCTCGCTGTTCAGCTCTTGGCGCTTGGCC +
Preference number: 6 (lower is better)
Translates to: MLFLQASIFRFS*AISLFSSWRLA
Trigger: GGCCAAGCGCCAAGAGCTGAACAGCGAGATCGCCAAGCTGAATCTGAAGATCGAAGCCTGTAAGAAGAGCAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS CAA 90 bp TGTTCTTCTCAGTACGGACCACGTGACAGATTGATGATGACATGGTaGTGTCCATCCGTCCGCCAGTGTGGCAGGGAATACAACTGCTTC +
Preference number: 6 (lower is better)
Translates to: CSSQYGPRDRLMMTW*CPSVRQCGREYNCF
Trigger: GAAGCAGTTGTATTCCCTGCCACACTGGCGGACGGATGGACACAACCATGTCATCATCAATCTGTCACGTGGTCCGTACTGAGAAGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522698.1
CDS CAA 90 bp AGGCAAAGTTCTCAGACTGTCCTACAAGGCCCACAGAGGGGTGTGTaGGAGCCACTCACACCTGCTCATGAATGGCGCTTTCTACATTTT +
Preference number: 6 (lower is better)
Translates to: RQSSQTVLQGPQRGV*EPLTPAHEWRFLHF
Trigger: AAAATGTAGAAAGCGCCATTCATGAGCAGGTGTGAGTGGCTCCAACACACCCCTCTGTGGGCCTTGTAGGACAGTCTGAGAACTTTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523271.1
CDS TCA 72 bp GACTTGTGTAGCATTACACCTCAGCACACGACTTCTTaGAAGAGTGAACCTCCAGGGCTTGCTCTCCGGCTT +
Preference number: 6 (lower is better)
Translates to: DLCSITPQHTTS*KSEPPGLALRL
Trigger: AAGCCGGAGAGCAAGCCCTGGAGGTTCACTCTTTCAAGAAGTCGTGTGCTGAGGTGTAATGCTACACAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220562.9
ENST00000519886.5
CDS TCA 72 bp AGAAGGTGGACTGGGCCACCATGGCACGGCCAGTACTaGCGTTATAGAGAAGGTTCTGTGTATCTGACTTAC +
Preference number: 6 (lower is better)
Translates to: RRWTGPPWHGQY*RYREGSVYLTY
Trigger: GTAAGTCAGATACACAGAACCTTCTCTATAACGTCAGTACTGGCCGTGCCATGGTGGCCCAGTCCACCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS TCA 72 bp GACTTGTGTAGCATTACACCTCAGCACACGACTTCTTaGAAGAGTGAACCTCCAGGGCTTGCTCTCCTCGCT +
Preference number: 6 (lower is better)
Translates to: DLCSITPQHTTS*KSEPPGLALLA
Trigger: AGCGAGGAGAGCAAGCCCTGGAGGTTCACTCTTTCAAGAAGTCGTGTGCTGAGGTGTAATGCTACACAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523149.5
CDS GCA 72 bp AATTCCTCTTTTGTAGATGTCTGCCCACAGGCCACGTaGCTTCTTCTCTCCTCCACTCAGCAGCAGATACAG +
Preference number: 6 (lower is better)
Translates to: NSSFVDVCPQAT*LLLSSTQQQIQ
Trigger: CTGTATCTGCTGCTGAGTGGAGGAGAGAAGAAGGCACGTGGCCTGTGGGCAGACATCTACAAAAGAGGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522725.5
CDS CCA 72 bp TATCTGAAGCATATTCCCTGGATGGTTGCTAATCCCTaGTCCGCCCATCAGCAGCAGGCATTATCATCCCCA +
Preference number: 6 (lower is better)
Translates to: YLKHIPWMVANP*SAHQQQALSSP
Trigger: TGGGGATGATAATGCCTGCTGCTGATGGGCGGACCAGGGATTAGCAACCATCCAGGGAATATGCTTCAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520940.1
CDS TCA 72 bp GGTCACTGTCATAGACGTAGACCGGGAAGCCAGAGGTaGGAGGGCAACGAGAATAATCAAAGCAGTTGTGTA +
Preference number: 6 (lower is better)
Translates to: GHCHRRRPGSQR*EGNENNQSSCV
Trigger: TACACAACTGCTTTGATTATTCTCGTTGCCCTCTCACCTCTGGCTTCCCGGTCTACGTCTATGACAGTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS TCA 72 bp GACTTGTGTAGCATTACACCTCAGCACACGACTTCTTaGAAGAGTGAACCTCCAGGGCTTGCTCTCACCTTC +
Preference number: 6 (lower is better)
Translates to: DLCSITPQHTTS*KSEPPGLALTF
Trigger: GAAGGTGAGAGCAAGCCCTGGAGGTTCACTCTTTCAAGAAGTCGTGTGCTGAGGTGTAATGCTACACAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518223.1
CDS TCA 72 bp GACTTGTGTAGCATTACACCTCAGCACACGACTTCTTaGAAGAGTGAACCTCCAGGGCTTGCTCTCCACTCA +
Preference number: 6 (lower is better)
Translates to: DLCSITPQHTTS*KSEPPGLALHS
Trigger: TGAGTGGAGAGCAAGCCCTGGAGGTTCACTCTTTCAAGAAGTCGTGTGCTGAGGTGTAATGCTACACAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522725.5
CDS CAA 72 bp CCCAGATCACGTCGGGTCACTCGCCATAACCATGGGTaGCTATTCCACAAAACGATCTCTGTTTCACTGACA +
Preference number: 6 (lower is better)
Translates to: PRSRRVTRHNHG*LFHKTISVSLT
Trigger: TGTCAGTGAAACAGAGATCGTTTTGTGGAATAGCAACCCATGGTTATGGCGAGTGACCCGACGTGATCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220562.9
ENST00000519886.5
CDS CAA 72 bp GTATCTGACTTACGTGACAGATTGATGATGACATGGTaGTGTCCATCCGTCCGCCAGTGTGGCAGGGAATAC +
Preference number: 6 (lower is better)
Translates to: VSDLRDRLMMTW*CPSVRQCGREY
Trigger: GTATTCCCTGCCACACTGGCGGACGGATGGACACAACCATGTCATCATCAATCTGTCACGTAAGTCAGATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS CAA 72 bp GCTTTCAGCCAAAATATGCATGGATGGAGGGGCTGTTaGGGTGTGGCAGTAACTAGGAGGTATTACTGGCAC +
Preference number: 6 (lower is better)
Translates to: AFSQNMHGWRGC*GVAVTRRYYWH
Trigger: GTGCCAGTAATACCTCCTAGTTACTGCCACACCCAAACAGCCCCTCCATCCATGCATATTTTGGCTGAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523271.1
CDS CAA 90 bp AGGTTCTGTGTATCTGACTTACGTGACAGATTGATGATGACATGGTaGTGTCCATCCGTCCGCCAGTGTGGCAGGGAATACAACTGCTTC +
Preference number: 6 (lower is better)
Translates to: RFCVSDLRDRLMMTW*CPSVRQCGREYNCF
Trigger: GAAGCAGTTGTATTCCCTGCCACACTGGCGGACGGATGGACACAACCATGTCATCATCAATCTGTCACGTAAGTCAGATACACAGAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220562.9
CDS CAA 90 bp GACAGGATGGCCTCTGTCTCAATTTCATTCCAGGGTAAGAATCGGTaGTTCAAACTGTTCTTCTCAGTACGGACCACCATGATGGGGACG +
Preference number: 6 (lower is better)
Translates to: DRMASVSISFQGKNR*FKLFFSVRTTMMGT
Trigger: CGTCCCCATCATGGTGGTCCGTACTGAGAAGAACAGTTTGAACAACCGATTCTTACCCTGGAATGAAATTGAGACAGAGGCCATCCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220562.9
ENST00000521473.5
ENST00000523149.5
CDS CAA 90 bp AGGTTGTTGGCTTTCAGCCAAAATATGCATGGATGGAGGGGCTGTTaGGGTGTGGCAGTAACTAGGAGGTATTACTGGCACTTAGGGACT +
Preference number: 6 (lower is better)
Translates to: RLLAFSQNMHGWRGC*GVAVTRRYYWHLGT
Trigger: AGTCCCTAAGTGCCAGTAATACCTCCTAGTTACTGCCACACCCAAACAGCCCCTCCATCCATGCATATTTTGGCTGAAAGCCAACAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523271.1
CDS TCA 72 bp GACTTGTGTAGCATTACACCTCAGCACACGACTTCTTaGAAGAGTGAACCTCCAGGGCTTGCTCTCTTGCTT +
Preference number: 6 (lower is better)
Translates to: DLCSITPQHTTS*KSEPPGLALLL
Trigger: AAGCAAGAGAGCAAGCCCTGGAGGTTCACTCTTTCAAGAAGTCGTGTGCTGAGGTGTAATGCTACACAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454906.6
CDS TCA 72 bp GACTTGTGTAGCATTACACCTCAGCACACGACTTCTTaGAAGAGTGAACCTCCAGGGCTTGCTCTCTCAGAT +
Preference number: 6 (lower is better)
Translates to: DLCSITPQHTTS*KSEPPGLALSD
Trigger: ATCTGAGAGAGCAAGCCCTGGAGGTTCACTCTTTCAAGAAGTCGTGTGCTGAGGTGTAATGCTACACAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519288.5
CDS TCA 72 bp ACAGAGGGGTGTGTTGGAGCCACTCACACCTGCTCATaGATGGCGCTTTCTACATTTTCAGAATGTTGTCAG +
Preference number: 6 (lower is better)
Translates to: TEGCVGATHTCS*MALSTFSECCQ
Trigger: CTGACAACATTCTGAAAATGTAGAAAGCGCCATTCATGAGCAGGTGTGAGTGGCTCCAACACACCCCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523271.1
CDS TCA 72 bp AGCGCAGCAGGTGATTGTGTTAACACTCAAACCAACTaGACATATCACCCCTTCGCTCCAAAGCCTCCAACA +
Preference number: 6 (lower is better)
Translates to: SAAGDCVNTQTN*TYHPFAPKPPT
Trigger: TGTTGGAGGCTTTGGAGCGAAGGGGTGATATGTTCAGTTGGTTTGAGTGTTAACACAATCACCTGCTGCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523271.1
CDS TCA 72 bp GGATTCGAGACATCCTGTCGTGTGGATCTTCTGCAGTaGGGAATTATCCCATTCAAACTGCCATCATCACCC +
Preference number: 6 (lower is better)
Translates to: GFETSCRVDLLQ*GIIPFKLPSSP
Trigger: GGGTGATGATGGCAGTTTGAATGGGATAATTCCTCACTGCAGAAGATCCACACGACAGGATGTCTCGAATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523271.1
CDS GCA 72 bp GCAGGGGATTCGAGACATCCTGTCGTGTGGATCTTCTaGAGTGAGGAATTATCCCATTCAAACTGCCATCAT +
Preference number: 6 (lower is better)
Translates to: AGDSRHPVVWIF*SEELSHSNCHH
Trigger: ATGATGGCAGTTTGAATGGGATAATTCCTCACTGCAGAAGATCCACACGACAGGATGTCTCGAATCCCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523271.1
CDS CCA 72 bp AGGGGTGTGTTGGAGCCACTCACACCTGCTCATGAATaGCGCTTTCTACATTTTCAGAATGTTGTCAGCTTG +
Preference number: 6 (lower is better)
Translates to: RGVLEPLTPAHE*RFLHFQNVVSL
Trigger: CAAGCTGACAACATTCTGAAAATGTAGAAAGCGCCATTCATGAGCAGGTGTGAGTGGCTCCAACACACCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523271.1
CDS CAA 90 bp TCTTCTCAGTACGGACCACACCTTCATTTCTCCTATCAAAGTGTCTaGCGTTCTCACCCATGCTGTGCACCTCATATTAAGTCAGTCTGC +
Preference number: 6 (lower is better)
Translates to: SSQYGPHLHFSYQSV*RSHPCCAPHIKSVC
Trigger: GCAGACTGACTTAATATGAGGTGCACAGCATGGGTGAGAACGCAAGACACTTTGATAGGAGAAATGAAGGTGTGGTCCGTACTGAGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521532.5
CDS GCA 72 bp GATGTCTGCATTTTCTGTAACATAAACGTTAGCTCGTaGTGTCGCCTGAAAAGCCTGCTTGACCAAGGGATC +
Preference number: 6 (lower is better)
Translates to: DVCIFCNINVSS*CRLKSLLDQGI
Trigger: GATCCCTTGGTCAAGCAGGCTTTTCAGGCGACAGCACGAGCTAACGTTTATGTTACAGAAAATGCAGACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220562.9
ENST00000522698.1
CDS CCA 72 bp TGCAGTGAGCCAAGATTGCACTACTGTACTCCAGCCTaGAGAAAGAAGCGAGAAGACTCCATCTCAAAAAGA +
Preference number: 6 (lower is better)
Translates to: CSEPRLHYCTPA*RKKREDSISKR
Trigger: TCTTTTTGAGATGGAGTCTTCTCGCTTCTTTCTCCAGGCTGGAGTACAGTAGTGCAATCTTGGCTCACTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523271.1
CDS CAA 72 bp GCCTCTGTCTCAATTTCATTCCAGGGTAAGAATCGGTaGTTCAAACTGTTCTTCTCAGTACGGACCACCTGG +
Preference number: 6 (lower is better)
Translates to: ASVSISFQGKNR*FKLFFSVRTTW
Trigger: CCAGGTGGTCCGTACTGAGAAGAACAGTTTGAACAACCGATTCTTACCCTGGAATGAAATTGAGACAGAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517738.1
CDS CAA 72 bp CGCCCCAGACAGGACCTCAGAGGACCTGATCTTCATTaGTATTGCAGCTCAGGTCTTTTTGTGAAATCTTGT +
Preference number: 6 (lower is better)
Translates to: RPRQDLRGPDLH*YCSSGLFVKSC
Trigger: ACAAGATTTCACAAAAAGACCTGAGCTGCAATACAAATGAAGATCAGGTCCTCTGAGGTCCTGTCTGGGGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523271.1
CDS CAA 90 bp GACAGGATGGCCTCTGTCTCAATTTCATTCCAGGGTAAGAATCGGTaGTTCAAACTGTTCTTCTCAGTACGGACCACCTGGCATGAATTA +
Preference number: 6 (lower is better)
Translates to: DRMASVSISFQGKNR*FKLFFSVRTTWHEL
Trigger: TAATTCATGCCAGGTGGTCCGTACTGAGAAGAACAGTTTGAACAACCGATTCTTACCCTGGAATGAAATTGAGACAGAGGCCATCCTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517738.1
CDS CAA 90 bp GACAGGATGGCCTCTGTCTCAATTTCATTCCAGGGTAAGAATCGGTaGTTCAAACTGTTCTTCTCAGTACGGACCACACCTTCATTTCTC +
Preference number: 6 (lower is better)
Translates to: DRMASVSISFQGKNR*FKLFFSVRTTPSFL
Trigger: GAGAAATGAAGGTGTGGTCCGTACTGAGAAGAACAGTTTGAACAACCGATTCTTACCCTGGAATGAAATTGAGACAGAGGCCATCCTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521532.5
CDS TCA 72 bp ATGGGTTGCTATTCCACAAAACGATCTCTGTTTCACTaGCACGTTTCCAGAAGAGTTAGTGTGCTCCCCAGA +
Preference number: 6 (lower is better)
Translates to: MGCYSTKRSLFH*HVSRRVSVLPR
Trigger: TCTGGGGAGCACACTAACTCTTCTGGAAACGTGTCAGTGAAACAGAGATCGTTTTGTGGAATAGCAACCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220562.9
ENST00000519886.5
CDS GCA 72 bp ACGGACCACACCTTCATTTCTCCTATCAAAGTGTCTTaGGTTCTCACCCATGCTGTGCACCTCATATTAAGT +
Preference number: 6 (lower is better)
Translates to: TDHTFISPIKVS*VLTHAVHLILS
Trigger: ACTTAATATGAGGTGCACAGCATGGGTGAGAACGCAAGACACTTTGATAGGAGAAATGAAGGTGTGGTCCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521532.5
CDS CCA 72 bp AAACAAGATGAGTTGCTAAGTTTATTTCAGACTGCTTaGCCGGCAATTAAGAGACACTCCCCCAACATGGGC +
Preference number: 6 (lower is better)
Translates to: KQDELLSLFQTA*PAIKRHSPNMG
Trigger: GCCCATGTTGGGGGAGTGTCTCTTAATTGCCGGCCAAGCAGTCTGAAATAAACTTAGCAACTCATCTTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522725.5
CDS CAA 72 bp GCCTCTGTCTCAATTTCATTCCAGGGTAAGAATCGGTaGTTCAAACTGTTCTTCTCAGTACGGACCACCATG +
Preference number: 6 (lower is better)
Translates to: ASVSISFQGKNR*FKLFFSVRTTM
Trigger: CATGGTGGTCCGTACTGAGAAGAACAGTTTGAACAACCGATTCTTACCCTGGAATGAAATTGAGACAGAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220562.9
ENST00000521473.5
ENST00000523149.5
CDS CAA 72 bp GCTTGCTCTCACCTTCATTTCTCCTATCAAAGTGTCTaGCGTTCTCACCCATGCTGTGCACCTCATATTAAG +
Preference number: 6 (lower is better)
Translates to: ACSHLHFSYQSV*RSHPCCAPHIK
Trigger: CTTAATATGAGGTGCACAGCATGGGTGAGAACGCAAGACACTTTGATAGGAGAAATGAAGGTGAGAGCAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518223.1
CDS CAA 72 bp TACGGACCACACCTTCATTTCTCCTATCAAAGTGTCTaGCGTTCTCACCCATGCTGTGCACCTCATATTAAG +
Preference number: 6 (lower is better)
Translates to: YGPHLHFSYQSV*RSHPCCAPHIK
Trigger: CTTAATATGAGGTGCACAGCATGGGTGAGAACGCAAGACACTTTGATAGGAGAAATGAAGGTGTGGTCCGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521532.5
CDS CAA 72 bp GCCTCTGTCTCAATTTCATTCCAGGGTAAGAATCGGTaGTTCAAACTGTTCTTCTCAGTACGGACCACACCT +
Preference number: 6 (lower is better)
Translates to: ASVSISFQGKNR*FKLFFSVRTTP
Trigger: AGGTGTGGTCCGTACTGAGAAGAACAGTTTGAACAACCGATTCTTACCCTGGAATGAAATTGAGACAGAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521532.5
CDS TCA 72 bp AGAATACTTAACACACAGGGTTGTTTTGAGGCTAAATaGGATACGAGGCCTGGTATACAGCAGGTGTGCAGT +
Preference number: 6 (lower is better)
Translates to: RILNTQGCFEAK*DTRPGIQQVCS
Trigger: ACTGCACACCTGCTGTATACCAGGCCTCGTATCTCATTTAGCCTCAAAACAACCCTGTGTGTTAAGTATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522725.5
CDS GCA 72 bp CTTGCTCTCACCTTCATTTCTCCTATCAAAGTGTCTTaGGTTCTCACCCATGCTGTGCACCTCATATTAAGT +
Preference number: 6 (lower is better)
Translates to: LALTFISPIKVS*VLTHAVHLILS
Trigger: ACTTAATATGAGGTGCACAGCATGGGTGAGAACGCAAGACACTTTGATAGGAGAAATGAAGGTGAGAGCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518223.1
CDS GCA 72 bp ATAAATCACAGAACCATGAAACACACGATCCCTCACTaGCTCCTGTACAGATTCTTGAGTCTGGTCAGTACT +
Preference number: 6 (lower is better)
Translates to: INHRTMKHTIPH*LLYRFLSLVST
Trigger: AGTACTGACCAGACTCAAGAATCTGTACAGGAGGCAGTGAGGGATCGTGTGTTTCATGGTTCTGTGATTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523271.1
CDS CCA 72 bp AGGGCCCAAAAATCTCTCTGTAAGCCAACTGAGGTTTaGGCGCTGCTAGTCTGTAATCTTCTTTATAGATTT +
Preference number: 6 (lower is better)
Translates to: RAQKSLCKPTEV*ALLVCNLLYRF
Trigger: AAATCTATAAAGAAGATTACAGACTAGCAGCGCCCAAACCTCAGTTGGCTTACAGAGAGATTTTTGGGCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523271.1
CDS GCA 72 bp CATTTCTCCTATCAAAGTGTCTTGCGTTCTCACCCATaGTGTGCACCTCATATTAAGTCAGTCTGCATTTTA +
Preference number: 6 (lower is better)
Translates to: HFSYQSVLRSHP*CAPHIKSVCIL
Trigger: TAAAATGCAGACTGACTTAATATGAGGTGCACAGCATGGGTGAGAACGCAAGACACTTTGATAGGAGAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518223.1
ENST00000521532.5
CDS CCA 72 bp ATGGTCTCTGACCCTATTCCAGCAGATTTTAAGTTCTaGCTGTTGACCAAAGAACATGTCCTTAATCTTTAT +
Preference number: 6 (lower is better)
Translates to: MVSDPIPADFKF*LLTKEHVLNLY
Trigger: ATAAAGATTAAGGACATGTTCTTTGGTCAACAGCCAGAACTTAAAATCTGCTGGAATAGGGTCAGAGACCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220562.9
ENST00000518223.1
ENST00000519886.5
CDS CAA 72 bp ATAACTGTTCAGAGGTATTTCCATCAGTATGTGGTTTaGCTGTCAAAAATGATTTATGTTGACCAGGCGCAG +
Preference number: 6 (lower is better)
Translates to: ITVQRYFHQYVV*LSKMIYVDQAQ
Trigger: CTGCGCCTGGTCAACATAAATCATTTTTGACAGCAAAACCACATACTGATGGAAATACCTCTGAACAGTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523271.1
CDS CAA 90 bp GAAATGGTCTCTGACCCTATTCCAGCAGATTTTAAGTTCTGGCTGTaGACCAAAGAACATGTCCTTAATCTTTATCAAACGATAAAAGGT +
Preference number: 6 (lower is better)
Translates to: EMVSDPIPADFKFWL*TKEHVLNLYQTIKG
Trigger: ACCTTTTATCGTTTGATAAAGATTAAGGACATGTTCTTTGGTCAACAGCCAGAACTTAAAATCTGCTGGAATAGGGTCAGAGACCATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220562.9
ENST00000518223.1
ENST00000519886.5