RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EXT2 (Homo sapiens)

Ensembl gene IDs: ENSG00000151348

Ensembl transcript IDs: ENST00000343631.3, ENST00000343631.4, ENST00000358681.8, ENST00000395673.7, ENST00000395673.8, ENST00000525559.1, ENST00000528159.1, ENST00000529186.1, ENST00000531161.6, ENST00000533608.7, ENST00000534048.1, ENST00000682359.1, ENST00000682711.1, ENST00000682815.1, ENST00000682947.1, ENST00000682993.1, ENST00000683000.1, ENST00000683204.1, ENST00000683299.1, ENST00000683870.1, ENST00000683881.1, ENST00000684039.1, ENST00000684124.1, ENST00000684437.1, ENST00000684533.1

Found 813 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTTCCAGCCCTGGCATTCCAAGCAGGCCCATCCCAGTTAGGCCCCTaGGGGCAAAGCCAGTGGCTCAGTGTGCACTTGGGCCAGGGCCAG +
Preference number: 1 (lower is better)
Translates to: FPALAFQAGPSQLGP*GQSQWLSVHLGQGQ
Trigger: CTGGCCCTGGCCCAAGTGCACACTGAGCCACTGGCTTTGCCCCCAGGGGCCTAACTGGGATGGGCCTGCTTGGAATGCCAGGGCTGGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR CCA 90 bp GCCACTCCCACACCACCTGCAATTCCTGAGAGGTTGTCCACAAGATaGGGCTTTGCTGAGGAAGCCTCTAGCAGACACAGCTGCCTGGTA +
Preference number: 1 (lower is better)
Translates to: ATPTPPAIPERLSTR*GFAEEASSRHSCLV
Trigger: TACCAGGCAGCTGTGTCTGCTAGAGGCTTCCTCAGCAAAGCCCCATCTTGTGGACAACCTCTCAGGAATTGCAGGTGGTGTGGGAGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR GCA 90 bp CATGGAACTGACAGGATCCTGACTCAGCGGCTGGTGCTCTTCCTGTaGACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCC +
Preference number: 1 (lower is better)
Translates to: HGTDRILTQRLVLFL*TSPALQVPRHLSNP
Trigger: GGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGGAAGAGCACCAGCCGCTGAGTCAGGATCCTGTCAGTTCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
3UTR CCA 90 bp TACTCTGCCTCTCTGTGCCAGGGCTGCTTGGGGAACAGCCCACTGTaGCTTCTCTTGCTGCAATGGAAGAGTACCCGAGCCAAGAGAAAT +
Preference number: 1 (lower is better)
Translates to: YSASLCQGCLGNSPL*LLLLQWKSTRAKRN
Trigger: ATTTCTCTTGGCTCGGGTACTCTTCCATTGCAGCAAGAGAAGCCACAGTGGGCTGTTCCCCAAGCAGCCCTGGCACAGAGAGGCAGAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR GCA 90 bp TGTGCCAGGGCTGCTTGGGGAACAGCCCACTGTGGCTTCTCTTGCTaGAATGGAAGAGTACCCGAGCCAAGAGAAATGGAAAAAGCAGCA +
Preference number: 1 (lower is better)
Translates to: CARAAWGTAHCGFSC*NGRVPEPREMEKAA
Trigger: TGCTGCTTTTTCCATTTCTCTTGGCTCGGGTACTCTTCCATTGCAGCAAGAGAAGCCACAGTGGGCTGTTCCCCAAGCAGCCCTGGCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR GCA 90 bp CTCTGTGCCAGGGCTGCTTGGGGAACAGCCCACTGTGGCTTCTCTTaGTGCAATGGAAGAGTACCCGAGCCAAGAGAAATGGAAAAAGCA +
Preference number: 1 (lower is better)
Translates to: LCARAAWGTAHCGFS*CNGRVPEPREMEKA
Trigger: TGCTTTTTCCATTTCTCTTGGCTCGGGTACTCTTCCATTGCAGCAAGAGAAGCCACAGTGGGCTGTTCCCCAAGCAGCCCTGGCACAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR CCA 90 bp CAGGGCTGCTTGGGGAACAGCCCACTGTGGCTTCTCTTGCTGCAATaGAAGAGTACCCGAGCCAAGAGAAATGGAAAAAGCAGCATACCC +
Preference number: 1 (lower is better)
Translates to: QGCLGNSPLWLLLLQ*KSTRAKRNGKSSIP
Trigger: GGGTATGCTGCTTTTTCCATTTCTCTTGGCTCGGGTACTCTTCCATTGCAGCAAGAGAAGCCACAGTGGGCTGTTCCCCAAGCAGCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR TCA 90 bp GCCAAGATCCAAGTAGGTCAACCTTCCACCCTTAACCTACTACTCTaGCATCAGAGTGCTGGGAGGCCTTGTTCTCTCCCTCTGTCCCAG +
Preference number: 1 (lower is better)
Translates to: AKIQVGQPSTLNLLL*HQSAGRPCSLPLSQ
Trigger: CTGGGACAGAGGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAGGGTGGAAGGTTGACCTACTTGGATCTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
3UTR CCA 90 bp TGGGACCTTCTTACGCTTGATGCAGAGGGTATCAGACATTCCTCCTaGCGTGTGTTCCCAGACATGGGCAGAAGACTGTTGTCAGGCCAA +
Preference number: 1 (lower is better)
Translates to: WDLLTLDAEGIRHSS*RVFPDMGRRLLSGQ
Trigger: TTGGCCTGACAACAGTCTTCTGCCCATGTCTGGGAACACACGCCAGGAGGAATGTCTGATACCCTCTGCATCAAGCGTAAGAAGGTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343631.3
ENST00000395673.7
ENST00000533608.7
3UTR CCA 90 bp CTGCCAATATGGTTAACACTCCTGCCAGAACTGCTCCTCAGGAAGTaGCTGGAGGAGACATGGGGCCAGTTTAGCATTCTCTACTCTGCC +
Preference number: 1 (lower is better)
Translates to: LPIWLTLLPELLLRK*LEETWGQFSILYSA
Trigger: GGCAGAGTAGAGAATGCTAAACTGGCCCCATGTCTCCTCCAGCCACTTCCTGAGGAGCAGTTCTGGCAGGAGTGTTAACCATATTGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR GCA 90 bp GTTGCCAGCAATGGTGAGCCGGAAATTGAAAGAATGACACAAGGTTaGCTGTACAGACCCACACACCCTCCCAGGAAATTGGGGAAGCTG +
Preference number: 1 (lower is better)
Translates to: VASNGEPEIERMTQG*LYRPTHPPRKLGKL
Trigger: CAGCTTCCCCAATTTCCTGGGAGGGTGTGTGGGTCTGTACAGGCAACCTTGTGTCATTCTTTCAATTTCCGGCTCACCATTGCTGGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR CCA 90 bp CTAAAGGGAAGGTTCTATATGGTGGCAAGGCCTGACTGGTGGCTTTaGTCTAAGACATATGGATCCCTCCTCTGTCAGCCACTCCCACAC +
Preference number: 1 (lower is better)
Translates to: LKGRFYMVARPDWWL*SKTYGSLLCQPLPH
Trigger: GTGTGGGAGTGGCTGACAGAGGAGGGATCCATATGTCTTAGACCAAAGCCACCAGTCAGGCCTTGCCACCATATAGAACCTTCCCTTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR CCA 90 bp AAAGTGAGGTCTGGGTACCCTTTACATGATTCCCCAGACCTCAAATaGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCCTGTCCGTGAA +
Preference number: 1 (lower is better)
Translates to: KVRSGYPLHDSPDLK*ANTLLFSSSLPVRE
Trigger: TTCACGGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGGGGAATCATGTAAAGGGTACCCAGACCTCACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
3UTR CCA 90 bp TCAAGTTGCTTTCAAAGTCTCTCTGGATGGAAGCTGCTGCCAATATaGTTAACACTCCTGCCAGAACTGCTCCTCAGGAAGTGGCTGGAG +
Preference number: 1 (lower is better)
Translates to: SSCFQSLSGWKLLPI*LTLLPELLLRKWLE
Trigger: CTCCAGCCACTTCCTGAGGAGCAGTTCTGGCAGGAGTGTTAACCATATTGGCAGCAGCTTCCATCCAGAGAGACTTTGAAAGCAACTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR CCA 90 bp TCCAGGCCCTGCAGTGGAAAGCTCAAGTTGCTTTCAAAGTCTCTCTaGATGGAAGCTGCTGCCAATATGGTTAACACTCCTGCCAGAACT +
Preference number: 1 (lower is better)
Translates to: SRPCSGKLKLLSKSL*MEAAANMVNTPART
Trigger: AGTTCTGGCAGGAGTGTTAACCATATTGGCAGCAGCTTCCATCCAGAGAGACTTTGAAAGCAACTTGAGCTTTCCACTGCAGGGCCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR GCA 90 bp CACAGGTTTCATATGCCTCCAGGCCCTGCAGTGGAAAGCTCAAGTTaGTTTCAAAGTCTCTCTGGATGGAAGCTGCTGCCAATATGGTTA +
Preference number: 1 (lower is better)
Translates to: HRFHMPPGPAVESSS*FQSLSGWKLLPIWL
Trigger: TAACCATATTGGCAGCAGCTTCCATCCAGAGAGACTTTGAAAGCAACTTGAGCTTTCCACTGCAGGGCCTGGAGGCATATGAAACCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR CCA 90 bp ATGCAGAGGGTATCAGACATTCCTCCTGGCGTGTGTTCCCAGACATaGGCAGAAGACTGTTGTCAGGCCAAAGACGGAGTTAAATATATC +
Preference number: 1 (lower is better)
Translates to: MQRVSDIPPGVCSQT*AEDCCQAKDGVKYI
Trigger: GATATATTTAACTCCGTCTTTGGCCTGACAACAGTCTTCTGCCCATGTCTGGGAACACACGCCAGGAGGAATGTCTGATACCCTCTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343631.3
ENST00000395673.7
ENST00000533608.7
3UTR CCA 90 bp TGGGCATCCCTAACAGTCCATTTAATGGAGGTGGAAAAGAGGCTGTaGCTTGAGCTTACAATGCCCTCACCCAGTCTTCAGATGAACTCA +
Preference number: 1 (lower is better)
Translates to: WASLTVHLMEVEKRL*LELTMPSPSLQMNS
Trigger: TGAGTTCATCTGAAGACTGGGTGAGGGCATTGTAAGCTCAAGCCACAGCCTCTTTTCCACCTCCATTAAATGGACTGTTAGGGATGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR GCA 90 bp CTTCTGTCTGATAGTTCTGTGCCTTTCAGGGAGAGTGGGAAGAGATaGAACCAGTGGTCCAACCAACTGAGAGCAGAAGAAAGGAAAAAG +
Preference number: 1 (lower is better)
Translates to: LLSDSSVPFRESGKR*NQWSNQLRAEERKK
Trigger: CTTTTTCCTTTCTTCTGCTCTCAGTTGGTTGGACCACTGGTTGCATCTCTTCCCACTCTCCCTGAAAGGCACAGAACTATCAGACAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR CCA 90 bp GATAGTTCTGTGCCTTTCAGGGAGAGTGGGAAGAGATGCAACCAGTaGTCCAACCAACTGAGAGCAGAAGAAAGGAAAAAGTGCTATCCT +
Preference number: 1 (lower is better)
Translates to: DSSVPFRESGKRCNQ*SNQLRAEERKKCYP
Trigger: AGGATAGCACTTTTTCCTTTCTTCTGCTCTCAGTTGGTTGGACCACTGGTTGCATCTCTTCCCACTCTCCCTGAAAGGCACAGAACTATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR CCA 90 bp TATATTCTAAAGGGAAGGTTCTATATGGTGGCAAGGCCTGACTGGTaGCTTTGGTCTAAGACATATGGATCCCTCCTCTGTCAGCCACTC +
Preference number: 1 (lower is better)
Translates to: YILKGRFYMVARPDW*LWSKTYGSLLCQPL
Trigger: GAGTGGCTGACAGAGGAGGGATCCATATGTCTTAGACCAAAGCCACCAGTCAGGCCTTGCCACCATATAGAACCTTCCCTTTAGAATATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR GCA 90 bp GGAGCTCAAGAACAGGATAGGGACACTGTCTTAGTCAACTCTAATTaGTATATCTCTTGGGCCTACCACACTGCCTGGCAAAGACAACAT +
Preference number: 1 (lower is better)
Translates to: GAQEQDRDTVLVNSN*YISWAYHTAWQRQH
Trigger: ATGTTGTCTTTGCCAGGCAGTGTGGTAGGCCCAAGAGATATAGCAATTAGAGTTGACTAAGACAGTGTCCCTATCCTGTTCTTGAGCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR CCA 90 bp TCGAGGTGCTTGGATATTCATTCTAGGTTCTTGTTCTTGAGAAAGTaGGTTAGGTGGGTGCATGCCAAGATCCAAGTAGGTCAACCTTCC +
Preference number: 1 (lower is better)
Translates to: SRCLDIHSRFLFLRK*VRWVHAKIQVGQPS
Trigger: GGAAGGTTGACCTACTTGGATCTTGGCATGCACCCACCTAACCCACTTTCTCAAGAACAAGAACCTAGAATGAATATCCAAGCACCTCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
3UTR TCA 90 bp AGAAACAAAATGCCAGATACAGATGCTGGTGACTCAACTATTTCTTaGAAAGGAAAGAGGCCTGGAAGCTTGGGAGAGGGGGCCAAACTT +
Preference number: 1 (lower is better)
Translates to: RNKMPDTDAGDSTIS*KGKRPGSLGEGAKL
Trigger: AAGTTTGGCCCCCTCTCCCAAGCTTCCAGGCCTCTTTCCTTTTCAAGAAATAGTTGAGTCACCAGCATCTGTATCTGGCATTTTGTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR TCA 90 bp TTTACAGCTGGGACTAAAACATACATGCTTAGAGTCCTGGGCCACTaGTGGACTCACATCATCTTACCAAGCTCAAGAACTCCCACTAGA +
Preference number: 1 (lower is better)
Translates to: FTAGTKTYMLRVLGH*WTHIILPSSRTPTR
Trigger: TCTAGTGGGAGTTCTTGAGCTTGGTAAGATGATGTGAGTCCATCAGTGGCCCAGGACTCTAAGCATGTATGTTTTAGTCCCAGCTGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR CCA 90 bp AAACCCCTAGAAAGATTAGAGGTCCTCACTGTGCTTGTCAGCCTCTaGTACCTGGGTGACAACAGAAATATTTTTCCTGGCTTTCTACCA +
Preference number: 1 (lower is better)
Translates to: KPLERLEVLTVLVSL*YLGDNRNIFPGFLP
Trigger: TGGTAGAAAGCCAGGAAAAATATTTCTGTTGTCACCCAGGTACCAGAGGCTGACAAGCACAGTGAGGACCTCTAATCTTTCTAGGGGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR TCA 90 bp GCCACTAAGGTAGTGCATTCGATGATGAGCAAAAGGGCAGAAATTTaGAGAAACCAGGGCAATATGACACATACACAATGCCAGCACAGT +
Preference number: 1 (lower is better)
Translates to: ATKVVHSMMSKRAEI*RNQGNMTHTQCQHS
Trigger: ACTGTGCTGGCATTGTGTATGTGTCATATTGCCCTGGTTTCTTCAAATTTCTGCCCTTTTGCTCATCATCGAATGCACTACCTTAGTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR TCA 90 bp ATGAATCGCCATCACCTGCTATATCCCTGTCTTGAATTTCTACGGTaGCTGTACCACCTATCTGTTCATAGGGTAACATCACCTTTGAGG +
Preference number: 1 (lower is better)
Translates to: MNRHHLLYPCLEFLR*LYHLSVHRVTSPLR
Trigger: CCTCAAAGGTGATGTTACCCTATGAACAGATAGGTGGTACAGTCACCGTAGAAATTCAAGACAGGGATATAGCAGGTGATGGCGATTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR GCA 90 bp GAAACATTAAAATTTAGAGTGGGTCTTGCCTGCCTGACTTTCCTCTaGCAAGATAAGCTCAATAAGGCCTGTTCACAGATGATGCATGGC +
Preference number: 1 (lower is better)
Translates to: ETLKFRVGLACLTFL*QDKLNKACSQMMHG
Trigger: GCCATGCATCATCTGTGAACAGGCCTTATTGAGCTTATCTTGGCAGAGGAAAGTCAGGCAGGCAAGACCCACTCTAAATTTTAATGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR CCA 90 bp TTGGATATTCATTCTAGGTTCTTGTTCTTGAGAAAGTGGGTTAGGTaGGTGCATGCCAAGATCCAAGTAGGTCAACCTTCCACCCTTAAC +
Preference number: 1 (lower is better)
Translates to: LDIHSRFLFLRKWVR*VHAKIQVGQPSTLN
Trigger: GTTAAGGGTGGAAGGTTGACCTACTTGGATCTTGGCATGCACCCACCTAACCCACTTTCTCAAGAACAAGAACCTAGAATGAATATCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
3UTR CCA 90 bp AATCCTCATTTACAGCTGGGACTAAAACATACATGCTTAGAGTCCTaGGCCACTGATGGACTCACATCATCTTACCAAGCTCAAGAACTC +
Preference number: 1 (lower is better)
Translates to: NPHLQLGLKHTCLES*ATDGLTSSYQAQEL
Trigger: GAGTTCTTGAGCTTGGTAAGATGATGTGAGTCCATCAGTGGCCCAGGACTCTAAGCATGTATGTTTTAGTCCCAGCTGTAAATGAGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR CCA 90 bp AAGTGCTCTTGCTGTCTCCAATTTCTGGCTGAGGAAACTAAGGCATaGTCAAGGGAAGTCACTGTGAGAAAAGGACATTTTAAAGCTTCT +
Preference number: 1 (lower is better)
Translates to: KCSCCLQFLAEETKA*SREVTVRKGHFKAS
Trigger: AGAAGCTTTAAAATGTCCTTTTCTCACAGTGACTTCCCTTGACCATGCCTTAGTTTCCTCAGCCAGAAATTGGAGACAGCAAGAGCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR CCA 90 bp CCTCAGCTGGATTTAAATCTGGAGCATGCCACAAAGTCTTCCACTTaGCATTTTCGAGAAGAACCCATCAGAGATCATAAGAAATACAAG +
Preference number: 1 (lower is better)
Translates to: PQLDLNLEHATKSST*HFREEPIRDHKKYK
Trigger: CTTGTATTTCTTATGATCTCTGATGGGTTCTTCTCGAAAATGCCAAGTGGAAGACTTTGTGGCATGCTCCAGATTTAAATCCAGCTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
3UTR TCA 90 bp GAGTTGAAAGAGCATCAATCTCTTATTAATGGATATTCATCATTATaGCTTCCAAAGAAGGGCCAGGGTACAACTGGCAACTGGAAGGTG +
Preference number: 1 (lower is better)
Translates to: ELKEHQSLINGYSSL*LPKKGQGTTGNWKV
Trigger: CACCTTCCAGTTGCCAGTTGTACCCTGGCCCTTCTTTGGAAGTCATAATGATGAATATCCATTAATAAGAGATTGATGCTCTTTCAACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR GCA 90 bp CGAGAAGAACCCATCAGAGATCATAAGAAATACAAGAACAGAGGTTaGATAGCTCGAGGTGCTTGGATATTCATTCTAGGTTCTTGTTCT +
Preference number: 1 (lower is better)
Translates to: REEPIRDHKKYKNRG*IARGAWIFILGSCS
Trigger: AGAACAAGAACCTAGAATGAATATCCAAGCACCTCGAGCTATGCAACCTCTGTTCTTGTATTTCTTATGATCTCTGATGGGTTCTTCTCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
3UTR TCA 90 bp CTAGTACAGACCCTCTGTTTTTCTCTGACAATACCTTTAAAACATTaGCTGGATCTAATCAGGAAGCAAACAGATTCCTCTGGAGGTTTC +
Preference number: 1 (lower is better)
Translates to: LVQTLCFSLTIPLKH*LDLIRKQTDSSGGF
Trigger: GAAACCTCCAGAGGAATCTGTTTGCTTCCTGATTAGATCCAGTCAATGTTTTAAAGGTATTGTCAGAGAAAAACAGAGGGTCTGTACTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343631.3
ENST00000395673.7
ENST00000533608.7
3UTR TCA 90 bp GAACCCAACCACTTCCCAAACCCAGTCTCTGCTTCATCTACTTTCTaGTTACTATCTTGGCTGAAAACTATCAAAGGTTCTTGGATTTTA +
Preference number: 1 (lower is better)
Translates to: EPNHFPNPVSASSTF*LLSWLKTIKGSWIL
Trigger: TAAAATCCAAGAACCTTTGATAGTTTTCAGCCAAGATAGTAATCAGAAAGTAGATGAAGCAGAGACTGGGTTTGGGAAGTGGTTGGGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR TCA 90 bp ATGTTTCCTTTCTATTCCAACCTCATCCAAAGTCATCCTCTCCACTaGGATGGTATAGATGACATGAGAGTTGAAAGAGCATCAATCTCT +
Preference number: 1 (lower is better)
Translates to: MFPFYSNLIQSHPLH*DGIDDMRVERASIS
Trigger: AGAGATTGATGCTCTTTCAACTCTCATGTCATCTATACCATCTCAGTGGAGAGGATGACTTTGGATGAGGTTGGAATAGAAAGGAAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR GCA 90 bp CCCAATGATCTACTAGAGAAAGACTATTGGAAATCCTATAGGAGGTaGTGCCACCAATGTACAATTTTCGTTAATTACCTCAATTGTGGC +
Preference number: 1 (lower is better)
Translates to: PNDLLEKDYWKSYRR*CHQCTIFVNYLNCG
Trigger: GCCACAATTGAGGTAATTAACGAAAATTGTACATTGGTGGCAGCACCTCCTATAGGATTTCCAATAGTCTTTCTCTAGTAGATCATTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR GCA 90 bp TTTCTACCATATCGTCCCCAATATTATGAATACATGAGACCAAAATaGTTTCCCATGTCTCCTACTGACCAGTACACATTACCCAAATCA +
Preference number: 1 (lower is better)
Translates to: FLPYRPQYYEYMRPK*FPMSPTDQYTLPKS
Trigger: TGATTTGGGTAATGTGTACTGGTCAGTAGGAGACATGGGAAAGCATTTTGGTCTCATGTATTCATAATATTGGGGACGATATGGTAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR GCA 90 bp AATGATCTACTAGAGAAAGACTATTGGAAATCCTATAGGAGGTGCTaGCACCAATGTACAATTTTCGTTAATTACCTCAATTGTGGCTGT +
Preference number: 1 (lower is better)
Translates to: NDLLEKDYWKSYRRC*HQCTIFVNYLNCGC
Trigger: ACAGCCACAATTGAGGTAATTAACGAAAATTGTACATTGGTGGCAGCACCTCCTATAGGATTTCCAATAGTCTTTCTCTAGTAGATCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR-3UTR TCA 90 bp GTGCCAGGGCTGCTTGGGGAACAGCCCACTGTGGCTTCTCTTGCTGCAATGGAAAAAGGATACAGTGGCTaGGCGTGGGGACTCACGCCC +
Preference number: 2 (lower is better)
Translates to: VPGLLGEQPTVASLAAMEKGYSG*AWGLTP
Trigger: GGGCGTGAGTCCCCACGCTCAGCCACTGTATCCTTT...TTCCATTGCAGCAAGAGAAGCCACAGTGGGCTGTTCCCCAAGCAGCCCTGGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR-3UTR CCA 90 bp CCCCAGACCTCAAATGGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCCTGTCCCTGACATCAGAGTGCTaGGAGGCCTTGTTCTCTCCC +
Preference number: 2 (lower is better)
Translates to: PQTSNGLTRFSSPAVFLSLTSEC*EALFSP
Trigger: GGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAG...GGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
3UTR CAA 90 bp TCTCTGTGCCAGGGCTGCTTGGGGAACAGCCCACTGTGGCTTCTCTaGCTGCAATGGAAGAGTACCCGAGCCAAGAGAAATGGAAAAAGC +
Preference number: 2 (lower is better)
Translates to: SLCQGCLGNSPLWLL*LQWKSTRAKRNGKS
Trigger: GCTTTTTCCATTTCTCTTGGCTCGGGTACTCTTCCATTGCAGCAAGAGAAGCCACAGTGGGCTGTTCCCCAAGCAGCCCTGGCACAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR CAA 90 bp CCACACCACCTGCAATTCCTGAGAGGTTGTCCACAAGATGGGGCTTaGCTGAGGAAGCCTCTAGCAGACACAGCTGCCTGGTACTTCTTG +
Preference number: 2 (lower is better)
Translates to: PHHLQFLRGCPQDGA*LRKPLADTAAWYFL
Trigger: CAAGAAGTACCAGGCAGCTGTGTCTGCTAGAGGCTTCCTCAGCAAAGCCCCATCTTGTGGACAACCTCTCAGGAATTGCAGGTGGTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR-3UTR GCA 90 bp AGGATCCTGACTCAGCGGCTGGTGCTCTTCCTGTGCACAAGCCCAGCACTCCAGTTGCATAGCTCGAGGTaGTTGGATATTCATTCTAGG +
Preference number: 2 (lower is better)
Translates to: RILTQRLVLFLCTSPALQLHSSR*LDIHSR
Trigger: CCTAGAATGAATATCCAAGCACCTCGAGCTATGCAA...CTGGAGTGCTGGGCTTGTGCACAGGAAGAGCACCAGCCGCTGAGTCAGGATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
3UTR-3UTR TCA 90 bp GGGTATCAGACATTCCTCCTGGCGTGTGTTCCCAGACATGGGCAGAAGACTGTTCTTAACCTACTACTCTaGCATCAGAGTGCTGGGAGG +
Preference number: 2 (lower is better)
Translates to: GYQTFLLACVPRHGQKTVLNLLL*HQSAGR
Trigger: CCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAG...AACAGTCTTCTGCCCATGTCTGGGAACACACGCCAGGAGGAATGTCTGATACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343631.3
ENST00000395673.7
ENST00000533608.7
3UTR-3UTR TCA 90 bp CATTCCTCCTGGCGTGTGTTCCCAGACATGGGCAGAAGACTGTTGTCAGGCCAACAGTCTTCCTGTCCGTaGAGTTTCCTTCCAGATTGT +
Preference number: 2 (lower is better)
Translates to: HSSWRVFPDMGRRLLSGQQSSCP*SFLPDC
Trigger: ACAATCTGGAAGGAAACTTCACGGACAGGAAGACTG...TTGGCCTGACAACAGTCTTCTGCCCATGTCTGGGAACACACGCCAGGAGGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343631.3
ENST00000395673.7
ENST00000533608.7
3UTR-3UTR CCA 90 bp ATGATTCCCCAGACCTCAAATGGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCCTGACATCAGAGTGCTaGGAGGCCTTGTTCTCTCCC +
Preference number: 2 (lower is better)
Translates to: MIPQTSNGLTRFSSPAVFLTSEC*EALFSP
Trigger: GGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAG...GAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGGGGAATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
3UTR-3UTR CCA 90 bp CCTGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAATCCCCAGACCTCAAATaGGCTAACACGCTTCTCTTC +
Preference number: 2 (lower is better)
Translates to: PVHKPSTPGPKAFIKSHQSPDLK*ANTLLF
Trigger: GAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGGGGA...TTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
3UTR-3UTR TCA 90 bp CCTGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAACAGTCTTCCTGTCCGTaGAGTTTCCTTCCAGATTGT +
Preference number: 2 (lower is better)
Translates to: PVHKPSTPGPKAFIKSHQQSSCP*SFLPDC
Trigger: ACAATCTGGAAGGAAACTTCACGGACAGGAAGACTG...TTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
3UTR-3UTR TCA 90 bp CTAGAGCGACTCCTTGCATGGCTAGTACAGACCCTCTGTTTTTCTCTGACAATAGAACTGACAGGATCCTaGCTCAGCGGCTGGTGCTCT +
Preference number: 2 (lower is better)
Translates to: LERLLAWLVQTLCFSLTIELTGS*LSGWCS
Trigger: AGAGCACCAGCCGCTGAGTCAGGATCCTGTCAGTTC...TATTGTCAGAGAAAAACAGAGGGTCTGTACTAGCCATGCAAGGAGTCGCTCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343631.3
ENST00000395673.7
ENST00000533608.7
3UTR-3UTR TCA 90 bp GTTCCCAGACATGGGCAGAAGACTGTTGTCAGGCCAAAGACGGAGTTAAATATAGAACTGACAGGATCCTaGCTCAGCGGCTGGTGCTCT +
Preference number: 2 (lower is better)
Translates to: VPRHGQKTVVRPKTELNIELTGS*LSGWCS
Trigger: AGAGCACCAGCCGCTGAGTCAGGATCCTGTCAGTTC...TATATTTAACTCCGTCTTTGGCCTGACAACAGTCTTCTGCCCATGTCTGGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343631.3
ENST00000395673.7
ENST00000533608.7
3UTR CAA 90 bp CCACAGGTTTCATATGCCTCCAGGCCCTGCAGTGGAAAGCTCAAGTaGCTTTCAAAGTCTCTCTGGATGGAAGCTGCTGCCAATATGGTT +
Preference number: 2 (lower is better)
Translates to: PQVSYASRPCSGKLK*LSKSLWMEAAANMV
Trigger: AACCATATTGGCAGCAGCTTCCATCCAGAGAGACTTTGAAAGCAACTTGAGCTTTCCACTGCAGGGCCTGGAGGCATATGAAACCTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR-3UTR GCA 90 bp GATTCCCCAGACCTCAAATGGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCCTTACAAGAACAGAGGTTaGATAGCTCGAGGTGCTTGG +
Preference number: 2 (lower is better)
Translates to: DSPDLKWANTLLFSSSLPYKNRG*IARGAW
Trigger: CCAAGCACCTCGAGCTATGCAACCTCTGTTCTTGTA...AGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGGGGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
3UTR-3UTR CCA 90 bp TGCTCTTCCTGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCTTGTTCTTGAGAAAGTaGGTTAGGTGGGTGCATGCC +
Preference number: 2 (lower is better)
Translates to: CSSCAQAQHSRSQGIYQILFLRK*VRWVHA
Trigger: GGCATGCACCCACCTAACCCACTTTCTCAAGAACAA...GATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGGAAGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
3UTR-3UTR CCA 90 bp TGTTCTCTTCCCTCATCTGGATCAGTAACTAGTTGGTTGGTCTTCAGCTGTGCTAGAGGCCTGGAAGCTTaGGAGAGGGGGCCAAACTTT +
Preference number: 2 (lower is better)
Translates to: CSLPSSGSVTSWLVFSCARGLEA*ERGPNF
Trigger: AAAGTTTGGCCCCCTCTCCCAAGCTTCCAGGCCTCT...AGCACAGCTGAAGACCAACCAACTAGTTACTGATCCAGATGAGGGAAGAGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR-3UTR TCA 90 bp TCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGCTTAACCTACTACTCTaGCATCAGAGTGCTGGGAGG +
Preference number: 2 (lower is better)
Translates to: SRSQGIYQIPPRCLAFAPLNLLL*HQSAGR
Trigger: CCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAG...CGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
3UTR-3UTR GCA 90 bp TGTTCTCTTCCCTCATCTGGATCAGTAACTAGTTGGTTGGTCTTCAGCTGTGCTAGAGTGGGTCTTGCCTaGCTGACTTTCCTCTGCCAA +
Preference number: 2 (lower is better)
Translates to: CSLPSSGSVTSWLVFSCARVGLA*LTFLCQ
Trigger: TTGGCAGAGGAAAGTCAGGCAGGCAAGACCCACTCT...AGCACAGCTGAAGACCAACCAACTAGTTACTGATCCAGATGAGGGAAGAGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR-3UTR CCA 90 bp CATGCCACAAAGTCTTCCACTTGGCATTTTCGAGAAGAACCCATCAGAGATCATCTGACATCAGAGTGCTaGGAGGCCTTGTTCTCTCCC +
Preference number: 2 (lower is better)
Translates to: HATKSSTWHFREEPIRDHLTSEC*EALFSP
Trigger: GGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAG...ATGATCTCTGATGGGTTCTTCTCGAAAATGCCAAGTGGAAGACTTTGTGGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
3UTR CAA 90 bp CAGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTaGGCTTTTGCACCGAATTCTGGGTTTGGTTCCCTGAAAGAACTC +
Preference number: 2 (lower is better)
Translates to: QHSRSQGIYQIPPRC*AFAPNSGFGSLKEL
Trigger: GAGTTCTTTCAGGGAACCAAACCCAGAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
3UTR-3UTR TCA 90 bp CTTCTCTTCTCCAGCAGTCTTCCTGTCCGTGAAGTTTCCTTCCAGATTGTTACACTTAACCTACTACTCTaGCATCAGAGTGCTGGGAGG +
Preference number: 2 (lower is better)
Translates to: LLFSSSLPVREVSFQIVTLNLLL*HQSAGR
Trigger: CCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAG...TGTAACAATCTGGAAGGAAACTTCACGGACAGGAAGACTGCTGGAGAAGAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
3UTR-3UTR TCA 90 bp GTGCTTGTCAGCCTCTGGTACCTGGGTGACAACAGAAATATTTTTCCTGGCTTTCTTAACCTACTACTCTaGCATCAGAGTGCTGGGAGG +
Preference number: 2 (lower is better)
Translates to: VLVSLWYLGDNRNIFPGFLNLLL*HQSAGR
Trigger: CCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAG...AAAGCCAGGAAAAATATTTCTGTTGTCACCCAGGTACCAGAGGCTGACAAGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR-3UTR GCA 90 bp GTTCTTAAAATGGTTATGATTTGGGACCTTCTTACGCTTGATGCAGAGGGTATCCTGGTGCTCTTCCTGTaGACAAGCCCAGCACTCCAG +
Preference number: 2 (lower is better)
Translates to: VLKMVMIWDLLTLDAEGILVLFL*TSPALQ
Trigger: CTGGAGTGCTGGGCTTGTGCACAGGAAGAGCACCAG...GATACCCTCTGCATCAAGCGTAAGAAGGTCCCAAATCATAACCATTTTAAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343631.3
ENST00000395673.7
ENST00000533608.7
3UTR-3UTR CCA 90 bp AGCTCGAGGTGCTTGGATATTCATTCTAGGTTCTTGTTCTTGAGAAAGTGGGTTCTGACATCAGAGTGCTaGGAGGCCTTGTTCTCTCCC +
Preference number: 2 (lower is better)
Translates to: SSRCLDIHSRFLFLRKWVLTSEC*EALFSP
Trigger: GGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAG...AACCCACTTTCTCAAGAACAAGAACCTAGAATGAATATCCAAGCACCTCGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
3UTR-3UTR CCA 90 bp ACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTTTGTTCTTGAGAAAGTaGGTTAGGTGGGTGCATGCC +
Preference number: 2 (lower is better)
Translates to: TSPALQVPRHLSNPTKMFLFLRK*VRWVHA
Trigger: GGCATGCACCCACCTAACCCACTTTCTCAAGAACAA...AAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
3UTR-3UTR CCA 90 bp TCAAATGGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCCTGTCCGTGAAGTTTTTGTTCTTGAGAAAGTaGGTTAGGTGGGTGCATGCC +
Preference number: 2 (lower is better)
Translates to: SNGLTRFSSPAVFLSVKFLFLRK*VRWVHA
Trigger: GGCATGCACCCACCTAACCCACTTTCTCAAGAACAA...AAACTTCACGGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
3UTR-3UTR CCA 90 bp TGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGAACCGAATTCTGGGTTTaGTTCCCTGAAAGAACTCAT +
Preference number: 2 (lower is better)
Translates to: CAQAQHSRSQGIYQIPPRTEFWV*FPERTH
Trigger: ATGAGTTCTTTCAGGGAACCAAACCCAGAATTCGGT...TCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
3UTR-3UTR CCA 90 bp TGCTCTTCCTGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCTTTTGCACCGAATTCTaGGTTTGGTTCCCTGAAAGA +
Preference number: 2 (lower is better)
Translates to: CSSCAQAQHSRSQGIYQIFCTEF*VWFPER
Trigger: TCTTTCAGGGAACCAAACCCAGAATTCGGTGCAAAA...GATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGGAAGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
3UTR-3UTR CCA 90 bp TGTTCTCTTCCCTCATCTGGATCAGTAACTAGTTGGTTGGTCTTCAGCTGTGCTAAGTATTTCCAGCCCTaGCATTCCAAGCAGGCCCAT +
Preference number: 2 (lower is better)
Translates to: CSLPSSGSVTSWLVFSCAKYFQP*HSKQAH
Trigger: ATGGGCCTGCTTGGAATGCCAGGGCTGGAAATACTT...AGCACAGCTGAAGACCAACCAACTAGTTACTGATCCAGATGAGGGAAGAGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR CAA 90 bp CAGAGGTTGCATAGCTCGAGGTGCTTGGATATTCATTCTAGGTTCTaGTTCTTGAGAAAGTGGGTTAGGTGGGTGCATGCCAAGATCCAA +
Preference number: 2 (lower is better)
Translates to: QRLHSSRCLDIHSRF*FLRKWVRWVHAKIQ
Trigger: TTGGATCTTGGCATGCACCCACCTAACCCACTTTCTCAAGAACAAGAACCTAGAATGAATATCCAAGCACCTCGAGCTATGCAACCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
3UTR-3UTR TCA 90 bp GTTCCCAGACATGGGCAGAAGACTGTTGTCAGGCCAAAGACGGAGTTAAATATATGGGTACCCTTTACATaGTTCCCCAGACCTCAAATG +
Preference number: 2 (lower is better)
Translates to: VPRHGQKTVVRPKTELNIWVPFT*FPRPQM
Trigger: CATTTGAGGTCTGGGGAATCATGTAAAGGGTACCCA...TATATTTAACTCCGTCTTTGGCCTGACAACAGTCTTCTGCCCATGTCTGGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343631.3
ENST00000395673.7
ENST00000533608.7
3UTR-3UTR TCA 90 bp TGTTCTCTTCCCTCATCTGGATCAGTAACTAGTTGGTTGGTCTTCAGCTGTGCTAATGAACAAACTGGATaGGATGATCGCTTGCCCCCT +
Preference number: 2 (lower is better)
Translates to: CSLPSSGSVTSWLVFSCANEQTG*DDRLPP
Trigger: AGGGGGCAAGCGATCATCTCATCCAGTTTGTTCATT...AGCACAGCTGAAGACCAACCAACTAGTTACTGATCCAGATGAGGGAAGAGAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR-3UTR GCA 90 bp AAGGAAGCTAGGATCACAGGGTTATTAGCAACATCTTTGGCCAATGAGAGCAAAGCTAGAGCGACTCCTTaGATGGCTAGTACAGACCCT +
Preference number: 2 (lower is better)
Translates to: KEARITGLLATSLANESKARATP*MASTDP
Trigger: AGGGTCTGTACTAGCCATGCAAGGAGTCGCTCTAGC...TTTGCTCTCATTGGCCAAAGATGTTGCTAATAACCCTGTGATCCTAGCTTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR-3UTR CCA 90 bp TGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGAATAGCTCGAGGTGCTTaGATATTCATTCTAGGTTCT +
Preference number: 2 (lower is better)
Translates to: CAQAQHSRSQGIYQIPPRIARGA*IFILGS
Trigger: AGAACCTAGAATGAATATCCAAGCACCTCGAGCTAT...TCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
3UTR CAA 90 bp TTGCATAGCTCGAGGTGCTTGGATATTCATTCTAGGTTCTTGTTCTaGAGAAAGTGGGTTAGGTGGGTGCATGCCAAGATCCAAGTAGGT +
Preference number: 2 (lower is better)
Translates to: LHSSRCLDIHSRFLF*RKWVRWVHAKIQVG
Trigger: ACCTACTTGGATCTTGGCATGCACCCACCTAACCCACTTTCTCAAGAACAAGAACCTAGAATGAATATCCAAGCACCTCGAGCTATGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
3UTR-3UTR TCA 90 bp CAAGGGAGAAAGGTGGTTCCTTGGACTATCAGGAATTGGTGTTTAAGACACAGTCTAGGTTCTTGTTCTTaGGAAAGTGGGTTAGGTGGG +
Preference number: 2 (lower is better)
Translates to: QGRKVVPWTIRNWCLRHSLGSCS*ESGLGG
Trigger: CCCACCTAACCCACTTTCTCAAGAACAAGAACCTAG...ACTGTGTCTTAAACACCAATTCCTGATAGTCCAAGGAACCACCTTTCTCCCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343631.3
ENST00000395673.7
ENST00000533608.7
3UTR-3UTR TCA 90 bp CAAGGGAGAAAGGTGGTTCCTTGGACTATCAGGAATTGGTGTTTAAGACACAGTCAGTCTTCCTGTCCGTaGAGTTTCCTTCCAGATTGT +
Preference number: 2 (lower is better)
Translates to: QGRKVVPWTIRNWCLRHSQSSCP*SFLPDC
Trigger: ACAATCTGGAAGGAAACTTCACGGACAGGAAGACTG...ACTGTGTCTTAAACACCAATTCCTGATAGTCCAAGGAACCACCTTTCTCCCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343631.3
ENST00000395673.7
ENST00000533608.7
3UTR-3UTR GCA 90 bp GCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCTTGCATAGCTCGAGGTaGTTGGATATTCATTCTAGG +
Preference number: 2 (lower is better)
Translates to: ALQVPRHLSNPTKMFGFCLHSSR*LDIHSR
Trigger: CCTAGAATGAATATCCAAGCACCTCGAGCTATGCAA...GCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
3UTR-3UTR GCA 90 bp GCAGCTCAGAAATACACGAACAATAAAGTGGAGTCCCTAGCCCACTCTGAATCCCTACAGCATAATAACTaGCCACCTTCATGTCACTCA +
Preference number: 2 (lower is better)
Translates to: AAQKYTNNKVESLAHSESLQHNN*PPSCHS
Trigger: TGAGTGACATGAAGGTGGGCAGTTATTATGCTGTAG...GGATTCAGAGTGGGCTAGGGACTCCACTTTATTGTTCGTGTATTTCTGAGCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR-3UTR CCA 90 bp ACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTACAAAGTCTTCCACTTaGCATTTTCGAGAAGAACCC +
Preference number: 2 (lower is better)
Translates to: TSPALQVPRHLSNPTKMFTKSST*HFREEP
Trigger: GGGTTCTTCTCGAAAATGCCAAGTGGAAGACTTTGT...AAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
3UTR-3UTR CCA 90 bp AAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGAATTCTGGGTTCCCCAGACCTCAAATaGGCTAACACGCTTCTCTTC +
Preference number: 2 (lower is better)
Translates to: KAFIKSHQDVWLLHRILGSPDLK*ANTLLF
Trigger: GAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGGGGA...ACCCAGAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
3UTR-3UTR CCA 90 bp TTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGAATTCTGGGTTTGGTTCTCCCCAGACCTCAAATaGGCTAACACGCTTCTCTTC +
Preference number: 2 (lower is better)
Translates to: LSNPTKMFGFCTEFWVWFSPDLK*ANTLLF
Trigger: GAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGGGGA...GAACCAAACCCAGAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
3UTR-3UTR CCA 90 bp ATCACTGGCAGGAAAGAACACAAGATTCTGACAACTAAAGTTGCTGTTTTTCTCGGCATCCCCTTGGGATaGGGGTCACAATTCCCACAA +
Preference number: 2 (lower is better)
Translates to: ITGRKEHKILTTKVAVFLGIPLG*GSQFPQ
Trigger: TTGTGGGAATTGTGACCCCCATCCCAAGGGGATGCC...GAGAAAAACAGCAACTTTAGTTGTCAGAATCTTGTGTTCTTTCCTGCCAGTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR-3UTR CCA 90 bp TGTTCTCTTCCCTCATCTGGATCAGTAACTAGTTGGTTGGTCTTCAGCTGTGCTCAACAGAACAATGGATaGTGTATGACTGACGCTGAC +
Preference number: 2 (lower is better)
Translates to: CSLPSSGSVTSWLVFSCAQQNNG*CMTDAD
Trigger: GTCAGCGTCAGTCATACACCATCCATTGTTCTGTTG...AGCACAGCTGAAGACCAACCAACTAGTTACTGATCCAGATGAGGGAAGAGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR-3UTR CCA 90 bp TTCAGTCACTTGTTTTGGTTATCTTCCTCATTAGAATGTAAGCTTGACGAAAGTTGGGGGCAAAGCCAGTaGCTCAGTGTGCACTTGGGC +
Preference number: 2 (lower is better)
Translates to: FSHLFWLSSSLECKLDESWGQSQ*LSVHLG
Trigger: GCCCAAGTGCACACTGAGCCACTGGCTTTGCCCCCA...ACTTTCGTCAAGCTTACATTCTAATGAGGAAGATAACCAAAACAAGTGACTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR-3UTR TCA 90 bp AAGGAAGCTAGGATCACAGGGTTATTAGCAACATCTTTGGCCAATGAGAGCAAATGGGTACCCTTTACATaGTTCCCCAGACCTCAAATG +
Preference number: 2 (lower is better)
Translates to: KEARITGLLATSLANESKWVPFT*FPRPQM
Trigger: CATTTGAGGTCTGGGGAATCATGTAAAGGGTACCCA...TTTGCTCTCATTGGCCAAAGATGTTGCTAATAACCCTGTGATCCTAGCTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR-3UTR GCA 90 bp GTGCTTGTCAGCCTCTGGTACCTGGGTGACAACAGAAATATTTTTCCTGGCTTTTTGCATAGCTCGAGGTaGTTGGATATTCATTCTAGG +
Preference number: 2 (lower is better)
Translates to: VLVSLWYLGDNRNIFPGFLHSSR*LDIHSR
Trigger: CCTAGAATGAATATCCAAGCACCTCGAGCTATGCAA...AAAGCCAGGAAAAATATTTCTGTTGTCACCCAGGTACCAGAGGCTGACAAGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR-3UTR GCA 90 bp CGCTTCTCTTCTCCAGCAGTCTTCCTGTCCGTGAAGTTTCCTTCCAGATTGTTATTTAAATCTGGAGCATaGCACAAAGTCTTCCACTTG +
Preference number: 2 (lower is better)
Translates to: RFSSPAVFLSVKFPSRLLFKSGA*HKVFHL
Trigger: CAAGTGGAAGACTTTGTGGCATGCTCCAGATTTAAA...TAACAATCTGGAAGGAAACTTCACGGACAGGAAGACTGCTGGAGAAGAGAAGCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
3UTR-3UTR GCA 90 bp GTGCTTGTCAGCCTCTGGTACCTGGGTGACAACAGAAATATTTTTCCTGGCTTTGTAAGCACCTGTGTTTaGTGCTGTCAGAAACTGAAA +
Preference number: 2 (lower is better)
Translates to: VLVSLWYLGDNRNIFPGFVSTCV*CCQKLK
Trigger: TTTCAGTTTCTGACAGCAGCAAACACAGGTGCTTAC...AAAGCCAGGAAAAATATTTCTGTTGTCACCCAGGTACCAGAGGCTGACAAGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR-3UTR CCA 90 bp AAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGAATTCTGGGTAGAAAGTGGGTTAGGTaGGTGCATGCCAAGATCCAA +
Preference number: 2 (lower is better)
Translates to: KAFIKSHQDVWLLHRILGRKWVR*VHAKIQ
Trigger: TTGGATCTTGGCATGCACCCACCTAACCCACTTTCT...ACCCAGAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
3UTR-3UTR CCA 90 bp GAGCCTCAGCTGGATTTAAATCTGGAGCATGCCACAAAGTCTTCCACTTGGCATATAGCTCGAGGTGCTTaGATATTCATTCTAGGTTCT +
Preference number: 2 (lower is better)
Translates to: EPQLDLNLEHATKSSTWHIARGA*IFILGS
Trigger: AGAACCTAGAATGAATATCCAAGCACCTCGAGCTAT...ATGCCAAGTGGAAGACTTTGTGGCATGCTCCAGATTTAAATCCAGCTGAGGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
3UTR-3UTR CCA 90 bp TGTTCTCTTCCCTCATCTGGATCAGTAACTAGTTGGTTGGTCTTCAGCTGTGCTAGAAAGGTGGTTCCTTaGACTATCAGGAATTGGTGT +
Preference number: 2 (lower is better)
Translates to: CSLPSSGSVTSWLVFSCARKVVP*TIRNWC
Trigger: ACACCAATTCCTGATAGTCCAAGGAACCACCTTTCT...AGCACAGCTGAAGACCAACCAACTAGTTACTGATCCAGATGAGGGAAGAGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR-3UTR CCA 90 bp CAACTGTTGCAAAGCAGTTGTATAGCAGCATTTAACGTTAGCCAGAACCTCCCTGCAAACAGATTCCTCTaGAGGTTTCTGAGTCATCTG +
Preference number: 2 (lower is better)
Translates to: QLLQSSCIAAFNVSQNLPANRFL*RFLSHL
Trigger: CAGATGACTCAGAAACCTCCAGAGGAATCTGTTTGC...AGGGAGGTTCTGGCTAACGTTAAATGCTGCTATACAACTGCTTTGCAACAGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343631.3
ENST00000395673.7
ENST00000533608.7
3UTR-3UTR TCA 90 bp GTTCTTAAAATGGTTATGATTTGGGACCTTCTTACGCTTGATGCAGAGGGTATCTGGGTACCCTTTACATaGTTCCCCAGACCTCAAATG +
Preference number: 2 (lower is better)
Translates to: VLKMVMIWDLLTLDAEGIWVPFT*FPRPQM
Trigger: CATTTGAGGTCTGGGGAATCATGTAAAGGGTACCCA...GATACCCTCTGCATCAAGCGTAAGAAGGTCCCAAATCATAACCATTTTAAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343631.3
ENST00000395673.7
ENST00000533608.7
3UTR-3UTR GCA 90 bp AGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGTTTAAATCTGGAGCATaGCACAAAGTCTTCCACTTG +
Preference number: 2 (lower is better)
Translates to: STPGPKAFIKSHQDVWLLFKSGA*HKVFHL
Trigger: CAAGTGGAAGACTTTGTGGCATGCTCCAGATTTAAA...CAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
3UTR-3UTR GCA 90 bp CCCAGACATGGGCAGAAGACTGTTGTCAGGCCAAAGACGGAGTTAAATATATCATTTAAATCTGGAGCATaGCACAAAGTCTTCCACTTG +
Preference number: 2 (lower is better)
Translates to: PRHGQKTVVRPKTELNISFKSGA*HKVFHL
Trigger: CAAGTGGAAGACTTTGTGGCATGCTCCAGATTTAAA...TGATATATTTAACTCCGTCTTTGGCCTGACAACAGTCTTCTGCCCATGTCTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343631.3
ENST00000395673.7
ENST00000533608.7
3UTR-3UTR CCA 90 bp CAACTGTTGCAAAGCAGTTGTATAGCAGCATTTAACGTTAGCCAGAACCTCCCTTTTTGCACCGAATTCTaGGTTTGGTTCCCTGAAAGA +
Preference number: 2 (lower is better)
Translates to: QLLQSSCIAAFNVSQNLPFCTEF*VWFPER
Trigger: TCTTTCAGGGAACCAAACCCAGAATTCGGTGCAAAA...AGGGAGGTTCTGGCTAACGTTAAATGCTGCTATACAACTGCTTTGCAACAGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343631.3
ENST00000395673.7
ENST00000533608.7
3UTR CAA 90 bp CTGAATAAATGTTCTCTTCCCTCATCTGGATCAGTAACTAGTTGGTaGGTCTTCAGCTGTGCTCACCAGAAAACCAAATGTTCCTTGAGT +
Preference number: 2 (lower is better)
Translates to: LNKCSLPSSGSVTSW*VFSCAHQKTKCSLS
Trigger: ACTCAAGGAACATTTGGTTTTCTGGTGAGCACAGCTGAAGACCAACCAACTAGTTACTGATCCAGATGAGGGAAGAGAACATTTATTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR-3UTR GCA 90 bp GTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGAATTCTTTAAATCTGGAGCATaGCACAAAGTCTTCCACTTG +
Preference number: 2 (lower is better)
Translates to: VPRHLSNPTKMFGFCTEFFKSGA*HKVFHL
Trigger: CAAGTGGAAGACTTTGTGGCATGCTCCAGATTTAAA...GAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
3UTR-3UTR CCA 90 bp CAACTGTTGCAAAGCAGTTGTATAGCAGCATTTAACGTTAGCCAGAACCTCCCTATAGCTCGAGGTGCTTaGATATTCATTCTAGGTTCT +
Preference number: 2 (lower is better)
Translates to: QLLQSSCIAAFNVSQNLPIARGA*IFILGS
Trigger: AGAACCTAGAATGAATATCCAAGCACCTCGAGCTAT...AGGGAGGTTCTGGCTAACGTTAAATGCTGCTATACAACTGCTTTGCAACAGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343631.3
ENST00000395673.7
ENST00000533608.7
3UTR-3UTR CCA 90 bp AAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGAATTCTGGGTACAAAGTCTTCCACTTaGCATTTTCGAGAAGAACCC +
Preference number: 2 (lower is better)
Translates to: KAFIKSHQDVWLLHRILGTKSST*HFREEP
Trigger: GGGTTCTTCTCGAAAATGCCAAGTGGAAGACTTTGT...ACCCAGAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
3UTR CAA 90 bp TCTTCCTCATTAGAATGTAAGCTTGACGAAAGTAGGTACATTGTTTaGTTCAGTGCCATATCCTCACACCAAGAACAGTATCTGGCACAC +
Preference number: 2 (lower is better)
Translates to: SSSLECKLDESRYIV*FSAISSHQEQYLAH
Trigger: GTGTGCCAGATACTGTTCTTGGTGTGAGGATATGGCACTGAACAAAACAATGTACCTACTTTCGTCAAGCTTACATTCTAATGAGGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR CAA 90 bp GCTAGTACAGACCCTCTGTTTTTCTCTGACAATACCTTTAAAACATaGACTGGATCTAATCAGGAAGCAAACAGATTCCTCTGGAGGTTT +
Preference number: 2 (lower is better)
Translates to: ASTDPLFFSDNTFKT*TGSNQEANRFLWRF
Trigger: AAACCTCCAGAGGAATCTGTTTGCTTCCTGATTAGATCCAGTCAATGTTTTAAAGGTATTGTCAGAGAAAAACAGAGGGTCTGTACTAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343631.3
ENST00000395673.7
ENST00000533608.7
3UTR-3UTR TCA 90 bp AAATGTTCTCTTCCCTCATCTGGATCAGTAACTAGTTGGTTGGTCTTCAGCTGTTTCTTAAAATGGTTATaGTTTGGGACCTTCTTACGC +
Preference number: 2 (lower is better)
Translates to: KCSLPSSGSVTSWLVFSCFLKWL*FGTFLR
Trigger: GCGTAAGAAGGTCCCAAATCATAACCATTTTAAGAA...ACAGCTGAAGACCAACCAACTAGTTACTGATCCAGATGAGGGAAGAGAACATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR-3UTR TCA 90 bp TTCAGTCACTTGTTTTGGTTATCTTCCTCATTAGAATGTAAGCTTGACGAAAGTCTGCCTGGTACTTCTTaGGAACTACCTTGTCTTCTG +
Preference number: 2 (lower is better)
Translates to: FSHLFWLSSSLECKLDESLPGTS*ELPCLL
Trigger: CAGAAGACAAGGTAGTTCTCAAGAAGTACCAGGCAG...ACTTTCGTCAAGCTTACATTCTAATGAGGAAGATAACCAAAACAAGTGACTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR-3UTR CCA 90 bp CATTTAACGTTAGCCAGAACCTCCCTGGCTAATGTTAAGTTTATACCAAAAGAAATCAAGGGAGAAAGGTaGTTCCTTGGACTATCAGGA +
Preference number: 2 (lower is better)
Translates to: HLTLARTSLANVKFIPKEIKGER*FLGLSG
Trigger: TCCTGATAGTCCAAGGAACCACCTTTCTCCCTTGAT...TTCTTTTGGTATAAACTTAACATTAGCCAGGGAGGTTCTGGCTAACGTTAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343631.3
ENST00000395673.7
ENST00000533608.7
3UTR-3UTR CCA 90 bp CATTTAACGTTAGCCAGAACCTCCCTGGCTAATGTTAAGTTTATACCAAAAGAAGCAAACAGATTCCTCTaGAGGTTTCTGAGTCATCTG +
Preference number: 2 (lower is better)
Translates to: HLTLARTSLANVKFIPKEANRFL*RFLSHL
Trigger: CAGATGACTCAGAAACCTCCAGAGGAATCTGTTTGC...TTCTTTTGGTATAAACTTAACATTAGCCAGGGAGGTTCTGGCTAACGTTAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343631.3
ENST00000395673.7
ENST00000533608.7
3UTR-3UTR GCA 90 bp CATTTAACGTTAGCCAGAACCTCCCTGGCTAATGTTAAGTTTATACCAAAAGAATTGCATAGCTCGAGGTaGTTGGATATTCATTCTAGG +
Preference number: 2 (lower is better)
Translates to: HLTLARTSLANVKFIPKELHSSR*LDIHSR
Trigger: CCTAGAATGAATATCCAAGCACCTCGAGCTATGCAA...TTCTTTTGGTATAAACTTAACATTAGCCAGGGAGGTTCTGGCTAACGTTAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343631.3
ENST00000395673.7
ENST00000533608.7
3UTR-3UTR TCA 90 bp TTCAGTCACTTGTTTTGGTTATCTTCCTCATTAGAATGTAAGCTTGACGAAAGTCACAATGAACTCAGATaGAAGAGTTCCTCTTCCCAA +
Preference number: 2 (lower is better)
Translates to: FSHLFWLSSSLECKLDESHNELR*KSSSSQ
Trigger: TTGGGAAGAGGAACTCTTTCATCTGAGTTCATTGTG...ACTTTCGTCAAGCTTACATTCTAATGAGGAAGATAACCAAAACAAGTGACTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR-3UTR GCA 90 bp TTCAGTCACTTGTTTTGGTTATCTTCCTCATTAGAATGTAAGCTTGACGAAAGTCATTGTTTTGTTCAGTaGCATATCCTCACACCAAGA +
Preference number: 2 (lower is better)
Translates to: FSHLFWLSSSLECKLDESHCFVQ*HILTPR
Trigger: TCTTGGTGTGAGGATATGGCACTGAACAAAACAATG...ACTTTCGTCAAGCTTACATTCTAATGAGGAAGATAACCAAAACAAGTGACTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR CAA 90 bp ATCTACTTTCTGATTACTATCTTGGCTGAAAACTATCAAAGGTTCTaGGATTTTAACCTCAAATCAACTTCAGAACCTGTGGCTAGAAAC +
Preference number: 2 (lower is better)
Translates to: IYFLITILAENYQRF*DFNLKSTSEPVARN
Trigger: GTTTCTAGCCACAGGTTCTGAAGTTGATTTGAGGTTAAAATCCAAGAACCTTTGATAGTTTTCAGCCAAGATAGTAATCAGAAAGTAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR CCA 72 bp GGCCCATCCCAGTTAGGCCCCTGGGGGCAAAGCCAGTaGCTCAGTGTGCACTTGGGCCAGGGCCAGTTCAAG +
Preference number: 3 (lower is better)
Translates to: GPSQLGPWGQSQ*LSVHLGQGQFK
Trigger: CTTGAACTGGCCCTGGCCCAAGTGCACACTGAGCCACTGGCTTTGCCCCCAGGGGCCTAACTGGGATGGGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR CCA 72 bp CTGGCATTCCAAGCAGGCCCATCCCAGTTAGGCCCCTaGGGGCAAAGCCAGTGGCTCAGTGTGCACTTGGGC +
Preference number: 3 (lower is better)
Translates to: LAFQAGPSQLGP*GQSQWLSVHLG
Trigger: GCCCAAGTGCACACTGAGCCACTGGCTTTGCCCCCAGGGGCCTAACTGGGATGGGCCTGCTTGGAATGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR GCA 72 bp AGAGGACTCCAAATAGCTTCAGACAGCAGCCAGCCATaGAGGGCCCTCACCAGGCACCGGATGGACGCTCTC +
Preference number: 3 (lower is better)
Translates to: RGLQIASDSSQP*RALTRHRMDAL
Trigger: GAGAGCGTCCATCCGGTGCCTGGTGAGGGCCCTGCATGGCTGGCTGCTGTCTGAAGCTATTTGGAGTCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR CCA 72 bp TCTCTGTGCCAGGGCTGCTTGGGGAACAGCCCACTGTaGCTTCTCTTGCTGCAATGGAAGAGTACCCGAGCC +
Preference number: 3 (lower is better)
Translates to: SLCQGCLGNSPL*LLLLQWKSTRA
Trigger: GGCTCGGGTACTCTTCCATTGCAGCAAGAGAAGCCACAGTGGGCTGTTCCCCAAGCAGCCCTGGCACAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR CCA 72 bp TGCAGGGCCCTCACCAGGCACCGGATGGACGCTCTCTaGACTCCTCAAAAGAGGCCCAAATCACAAGTGCTC +
Preference number: 3 (lower is better)
Translates to: CRALTRHRMDAL*TPQKRPKSQVL
Trigger: GAGCACTTGTGATTTGGGCCTCTTTTGAGGAGTCCAGAGAGCGTCCATCCGGTGCCTGGTGAGGGCCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR-3UTR CAA 90 bp GTGCCAGGGCTGCTTGGGGAACAGCCCACTGTGGCTTCTCTTGCTGCAATGGAAGGGACCTTCTTACGCTaGATGCAGAGGGTATCAGAC +
Preference number: 3 (lower is better)
Translates to: VPGLLGEQPTVASLAAMEGTFLR*MQRVSD
Trigger: GTCTGATACCCTCTGCATCAAGCGTAAGAAGGTCCC...TTCCATTGCAGCAAGAGAAGCCACAGTGGGCTGTTCCCCAAGCAGCCCTGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR GCA 72 bp AGGGCTGCTTGGGGAACAGCCCACTGTGGCTTCTCTTaGTGCAATGGAAGAGTACCCGAGCCAAGAGAAATG +
Preference number: 3 (lower is better)
Translates to: RAAWGTAHCGFS*CNGRVPEPREM
Trigger: CATTTCTCTTGGCTCGGGTACTCTTCCATTGCAGCAAGAGAAGCCACAGTGGGCTGTTCCCCAAGCAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR CCA 72 bp CCAGAACTGCTCCTCAGGAAGTGGCTGGAGGAGACATaGGGCCAGTTTAGCATTCTCTACTCTGCCTCTCTG +
Preference number: 3 (lower is better)
Translates to: PELLLRKWLEET*GQFSILYSASL
Trigger: CAGAGAGGCAGAGTAGAGAATGCTAAACTGGCCCCATGTCTCCTCCAGCCACTTCCTGAGGAGCAGTTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR-3UTR CAA 90 bp GTGCCAGGGCTGCTTGGGGAACAGCCCACTGTGGCTTCTCTTGCTGCAATGGAAGAGAAAGGTGGTTCCTaGGACTATCAGGAATTGGTG +
Preference number: 3 (lower is better)
Translates to: VPGLLGEQPTVASLAAMEEKGGS*DYQELV
Trigger: CACCAATTCCTGATAGTCCAAGGAACCACCTTTCTC...TTCCATTGCAGCAAGAGAAGCCACAGTGGGCTGTTCCCCAAGCAGCCCTGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR GCA 72 bp ACGGTAAGCAGAAATAGGGGCCGGAAGAGGGCTGGCTaGCAGCATCACCAGGTACAATCTGGTAAACGATCT +
Preference number: 3 (lower is better)
Translates to: TVSRNRGRKRAG*QHHQVQSGKRS
Trigger: AGATCGTTTACCAGATTGTACCTGGTGATGCTGGCAGCCAGCCCTCTTCCGGCCCCTATTTCTGCTTACCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR CCA 72 bp ACACCACCTGCAATTCCTGAGAGGTTGTCCACAAGATaGGGCTTTGCTGAGGAAGCCTCTAGCAGACACAGC +
Preference number: 3 (lower is better)
Translates to: TPPAIPERLSTR*GFAEEASSRHS
Trigger: GCTGTGTCTGCTAGAGGCTTCCTCAGCAAAGCCCCATCTTGTGGACAACCTCTCAGGAATTGCAGGTGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR-3UTR CAA 90 bp AAGTGGCTGGAGGAGACATGGGGCCAGTTTAGCATTCTCTACTCTGCCTCTCTGGAAGTAGATGAGGCTTaGGCAGAGAAACCAGGGTGG +
Preference number: 3 (lower is better)
Translates to: KWLEETWGQFSILYSASLEVDEA*AEKPGW
Trigger: CCACCCTGGTTTCTCTGCCAAAGCCTCATCTACTTC...CAGAGAGGCAGAGTAGAGAATGCTAAACTGGCCCCATGTCTCCTCCAGCCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR TCA 72 bp CTTCCAGCTCCCAGTCTGCGTCAGCACAGACCAGCATaGTGGTCACTATTTTCCAAAGGCAGCAGAGAAACC +
Preference number: 3 (lower is better)
Translates to: LPAPSLRQHRPA*WSLFSKGSRET
Trigger: GGTTTCTCTGCTGCCTTTGGAAAATAGTGACCATCATGCTGGTCTGTGCTGACGCAGACTGGGAGCTGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR GCA 72 bp CATATGCCTCCAGGCCCTGCAGTGGAAAGCTCAAGTTaGTTTCAAAGTCTCTCTGGATGGAAGCTGCTGCCA +
Preference number: 3 (lower is better)
Translates to: HMPPGPAVESSS*FQSLSGWKLLP
Trigger: TGGCAGCAGCTTCCATCCAGAGAGACTTTGAAAGCAACTTGAGCTTTCCACTGCAGGGCCTGGAGGCATATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR CCA 72 bp GTATCAGACATTCCTCCTGGCGTGTGTTCCCAGACATaGGCAGAAGACTGTTGTCAGGCCAAAGACGGAGTT +
Preference number: 3 (lower is better)
Translates to: VSDIPPGVCSQT*AEDCCQAKDGV
Trigger: AACTCCGTCTTTGGCCTGACAACAGTCTTCTGCCCATGTCTGGGAACACACGCCAGGAGGAATGTCTGATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343631.3
ENST00000395673.7
ENST00000533608.7
3UTR-3UTR CAA 90 bp TGTTCTCTTCCCTCATCTGGATCAGTAACTAGTTGGTTGGTCTTCAGCTGTGCTCACCCTCCCAGGAAATaGGGGAAGCTGGGCATCCCT +
Preference number: 3 (lower is better)
Translates to: CSLPSSGSVTSWLVFSCAHPPRK*GKLGIP
Trigger: AGGGATGCCCAGCTTCCCCAATTTCCTGGGAGGGTG...AGCACAGCTGAAGACCAACCAACTAGTTACTGATCCAGATGAGGGAAGAGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR CCA 72 bp TTGGGGAACAGCCCACTGTGGCTTCTCTTGCTGCAATaGAAGAGTACCCGAGCCAAGAGAAATGGAAAAAGC +
Preference number: 3 (lower is better)
Translates to: LGNSPLWLLLLQ*KSTRAKRNGKS
Trigger: GCTTTTTCCATTTCTCTTGGCTCGGGTACTCTTCCATTGCAGCAAGAGAAGCCACAGTGGGCTGTTCCCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR CCA 72 bp AGGTTCTATATGGTGGCAAGGCCTGACTGGTGGCTTTaGTCTAAGACATATGGATCCCTCCTCTGTCAGCCA +
Preference number: 3 (lower is better)
Translates to: RFYMVARPDWWL*SKTYGSLLCQP
Trigger: TGGCTGACAGAGGAGGGATCCATATGTCTTAGACCAAAGCCACCAGTCAGGCCTTGCCACCATATAGAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR-3UTR CAA 90 bp GGGTATCAGACATTCCTCCTGGCGTGTGTTCCCAGACATGGGCAGAAGACTGTTTCTAGGTTCTTGTTCTaGAGAAAGTGGGTTAGGTGG +
Preference number: 3 (lower is better)
Translates to: GYQTFLLACVPRHGQKTVSRFLF*RKWVRW
Trigger: CCACCTAACCCACTTTCTCAAGAACAAGAACCTAGA...AACAGTCTTCTGCCCATGTCTGGGAACACACGCCAGGAGGAATGTCTGATACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343631.3
ENST00000395673.7
ENST00000533608.7
3UTR-3UTR CAA 90 bp CCAGACCTCAAATGGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCCTGTCCGTCACAAAGTCTTCCACTaGGCATTTTCGAGAAGAACC +
Preference number: 3 (lower is better)
Translates to: PDLKWANTLLFSSSLPVRHKVFH*AFSRRT
Trigger: GGTTCTTCTCGAAAATGCCAAGTGGAAGACTTTGTG...ACGGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
3UTR-3UTR CAA 90 bp ATGGTGGCAAGGCCTGACTGGTGGCTTTGGTCTAAGACATATGGATCCCTCCTCCACAAAGTCTTCCACTaGGCATTTTCGAGAAGAACC +
Preference number: 3 (lower is better)
Translates to: MVARPDWWLWSKTYGSLLHKVFH*AFSRRT
Trigger: GGTTCTTCTCGAAAATGCCAAGTGGAAGACTTTGTG...GAGGAGGGATCCATATGTCTTAGACCAAAGCCACCAGTCAGGCCTTGCCACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR-3UTR CAA 90 bp AAGTGGCTGGAGGAGACATGGGGCCAGTTTAGCATTCTCTACTCTGCCTCTCTGAGGGTAACATCACCTTaGAGGTTGTTTCAAGTGCCT +
Preference number: 3 (lower is better)
Translates to: KWLEETWGQFSILYSASLRVTSP*RLFQVP
Trigger: AGGCACTTGAAACAACCTCAAAGGTGATGTTACCCT...CAGAGAGGCAGAGTAGAGAATGCTAAACTGGCCCCATGTCTCCTCCAGCCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR TCA 72 bp CAAAAAGCCAAACCAAAGAGGAATAGCTCATGGAACTaGCAGGATCCTGACTCAGCGGCTGGTGCTCTTCCT +
Preference number: 3 (lower is better)
Translates to: QKAKPKRNSSWN*QDPDSAAGALP
Trigger: AGGAAGAGCACCAGCCGCTGAGTCAGGATCCTGTCAGTTCCATGAGCTATTCCTCTTTGGTTTGGCTTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
3UTR TCA 72 bp AAGCAAAGGAAACACACCAGGCTCATGATGGGTGGCTaGTGGGAAGTCTCCAACACCCAAAGCCTTTACTCT +
Preference number: 3 (lower is better)
Translates to: KQRKHTRLMMGG*WEVSNTQSLYS
Trigger: AGAGTAAAGGCTTTGGGTGTTGGAGACTTCCCATCAGCCACCCATCATGAGCCTGGTGTGTTTCCTTTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR GCA 72 bp GATAGTTCTGTGCCTTTCAGGGAGAGTGGGAAGAGATaGAACCAGTGGTCCAACCAACTGAGAGCAGAAGAA +
Preference number: 3 (lower is better)
Translates to: DSSVPFRESGKR*NQWSNQLRAEE
Trigger: TTCTTCTGCTCTCAGTTGGTTGGACCACTGGTTGCATCTCTTCCCACTCTCCCTGAAAGGCACAGAACTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR CCA 72 bp TCTGGGTACCCTTTACATGATTCCCCAGACCTCAAATaGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCCT +
Preference number: 3 (lower is better)
Translates to: SGYPLHDSPDLK*ANTLLFSSSLP
Trigger: AGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGGGGAATCATGTAAAGGGTACCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
3UTR CCA 72 bp GAAGTCTCCAACACCCAAAGCCTTTACTCTATCAGCTaGGTCCTCACAGGATCTAACTGCAGAGCTAGGAAG +
Preference number: 3 (lower is better)
Translates to: EVSNTQSLYSIS*VLTGSNCRARK
Trigger: CTTCCTAGCTCTGCAGTTAGATCCTGTGAGGACCCAGCTGATAGAGTAAAGGCTTTGGGTGTTGGAGACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR CCA 72 bp CAAATGCTGCCCTTGATTCTACTCAGAAGTAGAAAGTaGGTGAGTACCAAACACAGGCCGAGGACAGGAGGT +
Preference number: 3 (lower is better)
Translates to: QMLPLILLRSRK*VSTKHRPRTGG
Trigger: ACCTCCTGTCCTCGGCCTGTGTTTGGTACTCACCCACTTTCTACTTCTGAGTAGAATCAAGGGCAGCATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR CCA 72 bp AAGGGAAGGTTCTATATGGTGGCAAGGCCTGACTGGTaGCTTTGGTCTAAGACATATGGATCCCTCCTCTGT +
Preference number: 3 (lower is better)
Translates to: KGRFYMVARPDW*LWSKTYGSLLC
Trigger: ACAGAGGAGGGATCCATATGTCTTAGACCAAAGCCACCAGTCAGGCCTTGCCACCATATAGAACCTTCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR CCA 72 bp CTAAAGGGAAGGTTCTATATGGTGGCAAGGCCTGACTaGTGGCTTTGGTCTAAGACATATGGATCCCTCCTC +
Preference number: 3 (lower is better)
Translates to: LKGRFYMVARPD*WLWSKTYGSLL
Trigger: GAGGAGGGATCCATATGTCTTAGACCAAAGCCACCAGTCAGGCCTTGCCACCATATAGAACCTTCCCTTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR-3UTR CAA 90 bp GATTCCCCAGACCTCAAATGGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCCTTCTAGGTTCTTGTTCTaGAGAAAGTGGGTTAGGTGG +
Preference number: 3 (lower is better)
Translates to: DSPDLKWANTLLFSSSLPSRFLF*RKWVRW
Trigger: CCACCTAACCCACTTTCTCAAGAACAAGAACCTAGA...AGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGGGGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
3UTR-3UTR CAA 90 bp TGCTCTTCCTGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCAAGATGTTTGGCTTTaGCACCGAATTCTGGGTTTG +
Preference number: 3 (lower is better)
Translates to: CSSCAQAQHSRSQGIYQIQDVWL*HRILGL
Trigger: CAAACCCAGAATTCGGTGCAAAAGCCAAACATCTTG...GATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGGAAGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
3UTR GCA 72 bp AATGGTGAGCCGGAAATTGAAAGAATGACACAAGGTTaGCTGTACAGACCCACACACCCTCCCAGGAAATTG +
Preference number: 3 (lower is better)
Translates to: NGEPEIERMTQG*LYRPTHPPRKL
Trigger: CAATTTCCTGGGAGGGTGTGTGGGTCTGTACAGGCAACCTTGTGTCATTCTTTCAATTTCCGGCTCACCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR CCA 72 bp TTTCAAAGTCTCTCTGGATGGAAGCTGCTGCCAATATaGTTAACACTCCTGCCAGAACTGCTCCTCAGGAAG +
Preference number: 3 (lower is better)
Translates to: FQSLSGWKLLPI*LTLLPELLLRK
Trigger: CTTCCTGAGGAGCAGTTCTGGCAGGAGTGTTAACCATATTGGCAGCAGCTTCCATCCAGAGAGACTTTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR TCA 72 bp TCTGCCAAGATAAGCTCAATAAGGCCTGTTCACAGATaGTGCATGGCTGGTATAATGGGACCAAATGCTGCC +
Preference number: 3 (lower is better)
Translates to: SAKISSIRPVHR*CMAGIMGPNAA
Trigger: GGCAGCATTTGGTCCCATTATACCAGCCATGCATCATCTGTGAACAGGCCTTATTGAGCTTATCTTGGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR GCA 72 bp GAACAGGATAGGGACACTGTCTTAGTCAACTCTAATTaGTATATCTCTTGGGCCTACCACACTGCCTGGCAA +
Preference number: 3 (lower is better)
Translates to: EQDRDTVLVNSN*YISWAYHTAWQ
Trigger: TTGCCAGGCAGTGTGGTAGGCCCAAGAGATATAGCAATTAGAGTTGACTAAGACAGTGTCCCTATCCTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR CCA 72 bp CATTCTAGGTTCTTGTTCTTGAGAAAGTGGGTTAGGTaGGTGCATGCCAAGATCCAAGTAGGTCAACCTTCC +
Preference number: 3 (lower is better)
Translates to: HSRFLFLRKWVR*VHAKIQVGQPS
Trigger: GGAAGGTTGACCTACTTGGATCTTGGCATGCACCCACCTAACCCACTTTCTCAAGAACAAGAACCTAGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
3UTR CCA 72 bp GAAAGATTAGAGGTCCTCACTGTGCTTGTCAGCCTCTaGTACCTGGGTGACAACAGAAATATTTTTCCTGGC +
Preference number: 3 (lower is better)
Translates to: ERLEVLTVLVSL*YLGDNRNIFPG
Trigger: GCCAGGAAAAATATTTCTGTTGTCACCCAGGTACCAGAGGCTGACAAGCACAGTGAGGACCTCTAATCTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR CCA 72 bp AACTCAGGCATAAGTGCTCTTGCTGTCTCCAATTTCTaGCTGAGGAAACTAAGGCATGGTCAAGGGAAGTCA +
Preference number: 3 (lower is better)
Translates to: NSGISALAVSNF*LRKLRHGQGKS
Trigger: TGACTTCCCTTGACCATGCCTTAGTTTCCTCAGCCAGAAATTGGAGACAGCAAGAGCACTTATGCCTGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR-3UTR CAA 90 bp GTTCCCAGACATGGGCAGAAGACTGTTGTCAGGCCAAAGACGGAGTTAAATATACATAGCTCGAGGTGCTaGGATATTCATTCTAGGTTC +
Preference number: 3 (lower is better)
Translates to: VPRHGQKTVVRPKTELNIHSSRC*DIHSRF
Trigger: GAACCTAGAATGAATATCCAAGCACCTCGAGCTATG...TATATTTAACTCCGTCTTTGGCCTGACAACAGTCTTCTGCCCATGTCTGGGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343631.3
ENST00000395673.7
ENST00000533608.7
3UTR-3UTR CAA 90 bp CACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACACAAAGTCTTCCACTaGGCATTTTCGAGAAGAACC +
Preference number: 3 (lower is better)
Translates to: HSRSQGIYQIPPRCLAFAHKVFH*AFSRRT
Trigger: GGTTCTTCTCGAAAATGCCAAGTGGAAGACTTTGTG...TGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
3UTR-3UTR CAA 90 bp GTTCCCAGACATGGGCAGAAGACTGTTGTCAGGCCAAAGACGGAGTTAAATATAATCCCACCAAGATGTTaGGCTTTTGCACCGAATTCT +
Preference number: 3 (lower is better)
Translates to: VPRHGQKTVVRPKTELNIIPPRC*AFAPNS
Trigger: AGAATTCGGTGCAAAAGCCAAACATCTTGGTGGGAT...TATATTTAACTCCGTCTTTGGCCTGACAACAGTCTTCTGCCCATGTCTGGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343631.3
ENST00000395673.7
ENST00000533608.7
3UTR TCA 72 bp GTCACACAGCTCTCTAGGGCTCACAATGAACTCAGATaGAAGAGTTCCTCTTCCCAAATCAAAGGACTCTCA +
Preference number: 3 (lower is better)
Translates to: VTQLSRAHNELR*KSSSSQIKGLS
Trigger: TGAGAGTCCTTTGATTTGGGAAGAGGAACTCTTTCATCTGAGTTCATTGTGAGCCCTAGAGAGCTGTGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR TCA 72 bp GGGACTAAAACATACATGCTTAGAGTCCTGGGCCACTaGTGGACTCACATCATCTTACCAAGCTCAAGAACT +
Preference number: 3 (lower is better)
Translates to: GTKTYMLRVLGH*WTHIILPSSRT
Trigger: AGTTCTTGAGCTTGGTAAGATGATGTGAGTCCATCAGTGGCCCAGGACTCTAAGCATGTATGTTTTAGTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR GCA 72 bp AAATTTAGAGTGGGTCTTGCCTGCCTGACTTTCCTCTaGCAAGATAAGCTCAATAAGGCCTGTTCACAGATG +
Preference number: 3 (lower is better)
Translates to: KFRVGLACLTFL*QDKLNKACSQM
Trigger: CATCTGTGAACAGGCCTTATTGAGCTTATCTTGGCAGAGGAAAGTCAGGCAGGCAAGACCCACTCTAAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR GCA 72 bp ATCATTCCATCTCACCAACTCAGGCATAAGTGCTCTTaGTGTCTCCAATTTCTGGCTGAGGAAACTAAGGCA +
Preference number: 3 (lower is better)
Translates to: IIPSHQLRHKCS*CLQFLAEETKA
Trigger: TGCCTTAGTTTCCTCAGCCAGAAATTGGAGACAGCAAGAGCACTTATGCCTGAGTTGGTGAGATGGAATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR CCA 72 bp AACTTTTACGGGTACCAGCTAGAGCGACTCCTTGCATaGCTAGTACAGACCCTCTGTTTTTCTCTGACAATA +
Preference number: 3 (lower is better)
Translates to: NFYGYQLERLLA*LVQTLCFSLTI
Trigger: TATTGTCAGAGAAAAACAGAGGGTCTGTACTAGCCATGCAAGGAGTCGCTCTAGCTGGTACCCGTAAAAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343631.3
ENST00000395673.7
ENST00000533608.7
3UTR CCA 72 bp TGCAGTGGAAAGCTCAAGTTGCTTTCAAAGTCTCTCTaGATGGAAGCTGCTGCCAATATGGTTAACACTCCT +
Preference number: 3 (lower is better)
Translates to: CSGKLKLLSKSL*MEAAANMVNTP
Trigger: AGGAGTGTTAACCATATTGGCAGCAGCTTCCATCCAGAGAGACTTTGAAAGCAACTTGAGCTTTCCACTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR-3UTR CAA 90 bp GTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGAATTCTCTAGGTTCTTGTTCTaGAGAAAGTGGGTTAGGTGG +
Preference number: 3 (lower is better)
Translates to: VPRHLSNPTKMFGFCTEFSRFLF*RKWVRW
Trigger: CCACCTAACCCACTTTCTCAAGAACAAGAACCTAGA...GAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
3UTR-3UTR CAA 90 bp CAAGGGAGAAAGGTGGTTCCTTGGACTATCAGGAATTGGTGTTTAAGACACAGTCAAGATGTTTGGCTTTaGCACCGAATTCTGGGTTTG +
Preference number: 3 (lower is better)
Translates to: QGRKVVPWTIRNWCLRHSQDVWL*HRILGL
Trigger: CAAACCCAGAATTCGGTGCAAAAGCCAAACATCTTG...ACTGTGTCTTAAACACCAATTCCTGATAGTCCAAGGAACCACCTTTCTCCCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343631.3
ENST00000395673.7
ENST00000533608.7
3UTR TCA 72 bp ACCTTCATGTCACTCAACAGAACAATGGATGGTGTATaGCTGACGCTGACTGGCAAAACAACTAGGTTTCTG +
Preference number: 3 (lower is better)
Translates to: TFMSLNRTMDGV*LTLTGKTTRFL
Trigger: CAGAAACCTAGTTGTTTTGCCAGTCAGCGTCAGTCATACACCATCCATTGTTCTGTTGAGTGACATGAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR TCA 72 bp ATCCATGAATCGCCATCACCTGCTATATCCCTGTCTTaGATTTCTACGGTGACTGTACCACCTATCTGTTCA +
Preference number: 3 (lower is better)
Translates to: IHESPSPAISLS*ISTVTVPPICS
Trigger: TGAACAGATAGGTGGTACAGTCACCGTAGAAATTCAAGACAGGGATATAGCAGGTGATGGCGATTCATGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR GCA 72 bp GAGGGGGAAACATTAAAATTTAGAGTGGGTCTTGCCTaGCTGACTTTCCTCTGCCAAGATAAGCTCAATAAG +
Preference number: 3 (lower is better)
Translates to: EGETLKFRVGLA*LTFLCQDKLNK
Trigger: CTTATTGAGCTTATCTTGGCAGAGGAAAGTCAGGCAGGCAAGACCCACTCTAAATTTTAATGTTTCCCCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR CCA 72 bp TGCTGTCTCCAATTTCTGGCTGAGGAAACTAAGGCATaGTCAAGGGAAGTCACTGTGAGAAAAGGACATTTT +
Preference number: 3 (lower is better)
Translates to: CCLQFLAEETKA*SREVTVRKGHF
Trigger: AAAATGTCCTTTTCTCACAGTGACTTCCCTTGACCATGCCTTAGTTTCCTCAGCCAGAAATTGGAGACAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR-3UTR CAA 90 bp GCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGAATTCTGGGTTTGTCTAGGTTCTTGTTCTaGAGAAAGTGGGTTAGGTGG +
Preference number: 3 (lower is better)
Translates to: AFIKSHQDVWLLHRILGLSRFLF*RKWVRW
Trigger: CCACCTAACCCACTTTCTCAAGAACAAGAACCTAGA...CAAACCCAGAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
3UTR TCA 72 bp GCAAAAGGGCAGAAATTTGAAGAAACCAGGGCAATATaGCACATACACAATGCCAGCACAGTCCATAGCTTT +
Preference number: 3 (lower is better)
Translates to: AKGQKFEETRAI*HIHNASTVHSF
Trigger: AAAGCTATGGACTGTGCTGGCATTGTGTATGTGTCATATTGCCCTGGTTTCTTCAAATTTCTGCCCTTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR TCA 72 bp CATCACCTGCTATATCCCTGTCTTGAATTTCTACGGTaGCTGTACCACCTATCTGTTCATAGGGTAACATCA +
Preference number: 3 (lower is better)
Translates to: HHLLYPCLEFLR*LYHLSVHRVTS
Trigger: TGATGTTACCCTATGAACAGATAGGTGGTACAGTCACCGTAGAAATTCAAGACAGGGATATAGCAGGTGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR GCA 72 bp AGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTaGACCGAATTCTGGGTTTGGTTCCCTGAAAGAACT +
Preference number: 3 (lower is better)
Translates to: RHLSNPTKMFGF*TEFWVWFPERT
Trigger: AGTTCTTTCAGGGAACCAAACCCAGAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
3UTR CCA 72 bp TTGGATATTCATTCTAGGTTCTTGTTCTTGAGAAAGTaGGTTAGGTGGGTGCATGCCAAGATCCAAGTAGGT +
Preference number: 3 (lower is better)
Translates to: LDIHSRFLFLRK*VRWVHAKIQVG
Trigger: ACCTACTTGGATCTTGGCATGCACCCACCTAACCCACTTTCTCAAGAACAAGAACCTAGAATGAATATCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
3UTR CCA 72 bp AAATGTTCTCTTCCCTCATCTGGATCAGTAACTAGTTaGTTGGTCTTCAGCTGTGCTCACCAGAAAACCAAA +
Preference number: 3 (lower is better)
Translates to: KCSLPSSGSVTS*LVFSCAHQKTK
Trigger: TTTGGTTTTCTGGTGAGCACAGCTGAAGACCAACCAACTAGTTACTGATCCAGATGAGGGAAGAGAACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR CCA 72 bp GACACTGTCTTAGTCAACTCTAATTGCTATATCTCTTaGGCCTACCACACTGCCTGGCAAAGACAACATTTT +
Preference number: 3 (lower is better)
Translates to: DTVLVNSNCYIS*AYHTAWQRQHF
Trigger: AAAATGTTGTCTTTGCCAGGCAGTGTGGTAGGCCCAAGAGATATAGCAATTAGAGTTGACTAAGACAGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR-3UTR CAA 90 bp ATCACTGGCAGGAAAGAACACAAGATTCTGACAACTAAAGTTGCTGTTTTTCTCAGAATGAGAGAAATTTaGGCATCCCCTTGGGATGGG +
Preference number: 3 (lower is better)
Translates to: ITGRKEHKILTTKVAVFLRMREI*ASPWDG
Trigger: CCCATCCCAAGGGGATGCCAAAATTTCTCTCATTCT...GAGAAAAACAGCAACTTTAGTTGTCAGAATCTTGTGTTCTTTCCTGCCAGTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR TCA 72 bp GCTTTCTACCATATCGTCCCCAATATTATGAATACATaGGACCAAAATGCTTTCCCATGTCTCCTACTGACC +
Preference number: 3 (lower is better)
Translates to: AFYHIVPNIMNT*DQNAFPCLLLT
Trigger: GGTCAGTAGGAGACATGGGAAAGCATTTTGGTCTCATGTATTCATAATATTGGGGACGATATGGTAGAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR GCA 72 bp CCCATCAGAGATCATAAGAAATACAAGAACAGAGGTTaGATAGCTCGAGGTGCTTGGATATTCATTCTAGGT +
Preference number: 3 (lower is better)
Translates to: PIRDHKKYKNRG*IARGAWIFILG
Trigger: ACCTAGAATGAATATCCAAGCACCTCGAGCTATGCAACCTCTGTTCTTGTATTTCTTATGATCTCTGATGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
3UTR CCA 72 bp GATTTAAATCTGGAGCATGCCACAAAGTCTTCCACTTaGCATTTTCGAGAAGAACCCATCAGAGATCATAAG +
Preference number: 3 (lower is better)
Translates to: DLNLEHATKSST*HFREEPIRDHK
Trigger: CTTATGATCTCTGATGGGTTCTTCTCGAAAATGCCAAGTGGAAGACTTTGTGGCATGCTCCAGATTTAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
3UTR-3UTR CAA 90 bp CATTTAACGTTAGCCAGAACCTCCCTGGCTAATGTTAAGTTTATACCAAAAGAACACAAAGTCTTCCACTaGGCATTTTCGAGAAGAACC +
Preference number: 3 (lower is better)
Translates to: HLTLARTSLANVKFIPKEHKVFH*AFSRRT
Trigger: GGTTCTTCTCGAAAATGCCAAGTGGAAGACTTTGTG...TTCTTTTGGTATAAACTTAACATTAGCCAGGGAGGTTCTGGCTAACGTTAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343631.3
ENST00000395673.7
ENST00000533608.7
3UTR TCA 72 bp GAGCATCAATCTCTTATTAATGGATATTCATCATTATaGCTTCCAAAGAAGGGCCAGGGTACAACTGGCAAC +
Preference number: 3 (lower is better)
Translates to: EHQSLINGYSSL*LPKKGQGTTGN
Trigger: GTTGCCAGTTGTACCCTGGCCCTTCTTTGGAAGTCATAATGATGAATATCCATTAATAAGAGATTGATGCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR CCA 72 bp GTGAAACAATGTCGTGTCCTGCTCATAATGGTCTCATaGGATACTTTTATTGTGCTGTTAAGGCCTAAAAGA +
Preference number: 3 (lower is better)
Translates to: VKQCRVLLIMVS*DTFIVLLRPKR
Trigger: TCTTTTAGGCCTTAACAGCACAATAAAAGTATCCCATGAGACCATTATGAGCAGGACACGACATTGTTTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR TCA 72 bp ATACATGAGACCAAAATGCTTTCCCATGTCTCCTACTaGCCAGTACACATTACCCAAATCAAAAGTATTTGG +
Preference number: 3 (lower is better)
Translates to: IHETKMLSHVSY*PVHITQIKSIW
Trigger: CCAAATACTTTTGATTTGGGTAATGTGTACTGGTCAGTAGGAGACATGGGAAAGCATTTTGGTCTCATGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR GCA 72 bp CTACTAGAGAAAGACTATTGGAAATCCTATAGGAGGTaGTGCCACCAATGTACAATTTTCGTTAATTACCTC +
Preference number: 3 (lower is better)
Translates to: LLEKDYWKSYRR*CHQCTIFVNYL
Trigger: GAGGTAATTAACGAAAATTGTACATTGGTGGCAGCACCTCCTATAGGATTTCCAATAGTCTTTCTCTAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR GCA 72 bp CTAGAGAAAGACTATTGGAAATCCTATAGGAGGTGCTaGCACCAATGTACAATTTTCGTTAATTACCTCAAT +
Preference number: 3 (lower is better)
Translates to: LEKDYWKSYRRC*HQCTIFVNYLN
Trigger: ATTGAGGTAATTAACGAAAATTGTACATTGGTGGCAGCACCTCCTATAGGATTTCCAATAGTCTTTCTCTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp CCCTTAACCTACTACTCTGACATCAGAGTGCTGGGAGGCCTTGTTCTCTCCCTCTTGGTCACCGGCTCATaGCGCGGGGCGCGGGCCACC +
Preference number: 4 (lower is better)
Translates to: PLTYYSDIRVLGGLVLSLLVTGS*RGARAT
Trigger: GGTGGCCCGCGCCCCGCGGCATGAGCCGGTGACCAA...GAGGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR GCA 90 bp CCAGACCTCAAATGGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCCTGTCCGTTTGGTCACCGGCTCATaGCGCGGGGCGCGGGCCACC +
Preference number: 4 (lower is better)
Translates to: PDLKWANTLLFSSSLPVRLVTGS*RGARAT
Trigger: GGTGGCCCGCGCCCCGCGGCATGAGCCGGTGACCAA...ACGGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CCA 90 bp ACCTACTACTCTGACATCAGAGTGCTGGGAGGCCTTGTTCTCTCCCTCTGTCCCGCTCGGCCCCGAGCTTaGTCACCGGCTCATGCCGCG +
Preference number: 4 (lower is better)
Translates to: TYYSDIRVLGGLVLSLCPARPRA*SPAHAA
Trigger: CGCGGCATGAGCCGGTGACCAAGCTCGGGGCCGAGC...GGGACAGAGGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR GCA 90 bp CCAGACCTCAAATGGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCCTGTCCGTATCGCCAGCCGCCACTaGCAGGGCCGAGTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: PDLKWANTLLFSSSLPVRIASRH*QGRVWA
Trigger: AGCCCAGACTCGGCCCTGGCAGTGGCGGCTGGCGAT...ACGGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
3UTR CAA 72 bp GGCCCCTGGGGGCAAAGCCAGTGGCTCAGTGTGCACTaGGGCCAGGGCCAGTTCAAGTTCGTCTTCTCTATA +
Preference number: 4 (lower is better)
Translates to: GPWGQSQWLSVH*GQGQFKFVFSI
Trigger: TATAGAGAAGACGAACTTGAACTGGCCCTGGCCCAAGTGCACACTGAGCCACTGGCTTTGCCCCCAGGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp TGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGAATCGCCAGCCGCCACTaGCAGGGCCGAGTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: CAQAQHSRSQGIYQIPPRIASRH*QGRVWA
Trigger: AGCCCAGACTCGGCCCTGGCAGTGGCGGCTGGCGAT...TCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CCA 90 bp AGGTGGGTGCATGCCAAGATCCAAGTAGGTCAACCTTCCACCCTTAACCTACTAGCTCGGCCCCGAGCTTaGTCACCGGCTCATGCCGCG +
Preference number: 4 (lower is better)
Translates to: RWVHAKIQVGQPSTLNLLARPRA*SPAHAA
Trigger: CGCGGCATGAGCCGGTGACCAAGCTCGGGGCCGAGC...TAGTAGGTTAAGGGTGGAAGGTTGACCTACTTGGATCTTGGCATGCACCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CCA 90 bp GCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCGGGCCGAGTCTGGGCTaGCGAGCAGCGAGCGAGGGG +
Preference number: 4 (lower is better)
Translates to: ALQVPRHLSNPTKMFGFCGPSLG*RAASEG
Trigger: CCCCTCGCTCGCTGCTCGCCAGCCCAGACTCGGCCC...GCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp ACCTACTACTCTGACATCAGAGTGCTGGGAGGCCTTGTTCTCTCCCTCTGTCCCCACATCGCTCAATACTaGCTGGCCCAGCCGAGCTCC +
Preference number: 4 (lower is better)
Translates to: TYYSDIRVLGGLVLSLCPHIAQY*LAQPSS
Trigger: GGAGCTCGGCTGGGCCAGGCAGTATTGAGCGATGTG...GGGACAGAGGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR GCA 90 bp CCTGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAAGCTGGGGCTACAGGTaGCTGCCACTATGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: PVHKPSTPGPKAFIKSHQSWGYR*LPLCPA
Trigger: AGCCGGGCATAGTGGCAGGCACCTGTAGCCCCAGCT...TTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp ACCTACTACTCTGACATCAGAGTGCTGGGAGGCCTTGTTCTCTCCCTCTGTCCCCAGCGGGAGGAAGAGTaGATTGCTCACGCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: TYYSDIRVLGGLVLSLCPQREEE*IAHAAP
Trigger: TGGGGCAGCGTGAGCAATCCACTCTTCCTCCCGCTG...GGGACAGAGGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp AAGTGGCTGGAGGAGACATGGGGCCAGTTTAGCATTCTCTACTCTGCCTCTCTGAAAGGATACAGTGGCTaGGCGTGGGGACTCACGCCC +
Preference number: 4 (lower is better)
Translates to: KWLEETWGQFSILYSASLKGYSG*AWGLTP
Trigger: GGGCGTGAGTCCCCACGCTCAGCCACTGTATCCTTT...CAGAGAGGCAGAGTAGAGAATGCTAAACTGGCCCCATGTCTCCTCCAGCCACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp GTGCCAGGGCTGCTTGGGGAACAGCCCACTGTGGCTTCTCTTGCTGCAATGGAAGAGGAAGTATTGCCGTaGACCTGGTCCTTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: VPGLLGEQPTVASLAAMEEEVLP*TWSFLW
Trigger: CCAGAGAAAGGACCAGGTCCACGGCAATACTTCCTC...TTCCATTGCAGCAAGAGAAGCCACAGTGGGCTGTTCCCCAAGCAGCCCTGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp CCAGACCTCAAATGGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCCTGTCCGTTCGCTCAATACTGCCTaGCCCAGCCGAGCTCCACGA +
Preference number: 4 (lower is better)
Translates to: PDLKWANTLLFSSSLPVRSLNTA*PSRAPR
Trigger: TCGTGGAGCTCGGCTGGGCCAGGCAGTATTGAGCGA...ACGGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CCA 90 bp CCTGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAATCGCTCAATACTGCCTaGCCCAGCCGAGCTCCACGA +
Preference number: 4 (lower is better)
Translates to: PVHKPSTPGPKAFIKSHQSLNTA*PSRAPR
Trigger: TCGTGGAGCTCGGCTGGGCCAGGCAGTATTGAGCGA...TTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CCA 90 bp GTGCCAGGGCTGCTTGGGGAACAGCCCACTGTGGCTTCTCTTGCTGCAATGGAACTCCAGGCCCTGCAGTaGAAAGCTCAAGTTGCTTTC +
Preference number: 4 (lower is better)
Translates to: VPGLLGEQPTVASLAAMELQALQ*KAQVAF
Trigger: GAAAGCAACTTGAGCTTTCCACTGCAGGGCCTGGAG...TTCCATTGCAGCAAGAGAAGCCACAGTGGGCTGTTCCCCAAGCAGCCCTGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp GTGCCAGGGCTGCTTGGGGAACAGCCCACTGTGGCTTCTCTTGCTGCAATGGAAAGGTTGTCCACAAGATaGGGCTTTGCTGAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: VPGLLGEQPTVASLAAMERLSTR*GFAEEA
Trigger: GGCTTCCTCAGCAAAGCCCCATCTTGTGGACAACCT...TTCCATTGCAGCAAGAGAAGCCACAGTGGGCTGTTCCCCAAGCAGCCCTGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp CCCTTAACCTACTACTCTGACATCAGAGTGCTGGGAGGCCTTGTTCTCTCCCTCGGTGTTCCACCACCTTaGGAGGCATGGTCCCGAAGA +
Preference number: 4 (lower is better)
Translates to: PLTYYSDIRVLGGLVLSLGVPPP*EAWSRR
Trigger: TCTTCGGGACCATGCCTCTCAAGGTGGTGGAACACC...GAGGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp GGGTATCAGACATTCCTCCTGGCGTGTGTTCCCAGACATGGGCAGAAGACTGTTGAACTGACAGGATCCTaGCTCAGCGGCTGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: GYQTFLLACVPRHGQKTVELTGS*LSGWCS
Trigger: AGAGCACCAGCCGCTGAGTCAGGATCCTGTCAGTTC...AACAGTCTTCTGCCCATGTCTGGGAACACACGCCAGGAGGAATGTCTGATACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp AGGATCCTGACTCAGCGGCTGGTGCTCTTCCTGTGCACAAGCCCAGCACTCCAGCACCGGGCCTGTCTCTaGATTTCTTCAATCTGTCTT +
Preference number: 4 (lower is better)
Translates to: RILTQRLVLFLCTSPALQHRACL*ISSICL
Trigger: AAGACAGATTGAAGAAATGCAGAGACAGGCCCGGTG...CTGGAGTGCTGGGCTTGTGCACAGGAAGAGCACCAGCCGCTGAGTCAGGATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp CCCCAGACCTCAAATGGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCCTGTCCCTTGGTCTTCATTCTTaGGATGAGGGCAGGACCCCG +
Preference number: 4 (lower is better)
Translates to: PQTSNGLTRFSSPAVFLSLGLHS*DEGRTP
Trigger: CGGGGTCCTGCCCTCATCCCAAGAATGAAGACCAAG...GGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CCA 90 bp CCCTTAACCTACTACTCTGACATCAGAGTGCTGGGAGGCCTTGTTCTCTCCCTCCCCTTGAGACTGTGGTaGGATCAGCGGGAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: PLTYYSDIRVLGGLVLSLPLRLW*DQREEE
Trigger: CTCTTCCTCCCGCTGATCCCACCACAGTCTCAAGGG...GAGGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp ACCTACTACTCTGACATCAGAGTGCTGGGAGGCCTTGTTCTCTCCCTCTGTCCCGGATGGAGACCCACCTaGGATGACAGGAGGAAGTAT +
Preference number: 4 (lower is better)
Translates to: TYYSDIRVLGGLVLSLCPGWRPT*DDRRKY
Trigger: ATACTTCCTCCTGTCATCTCAGGTGGGTCTCCATCC...GGGACAGAGGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp ACCTACTACTCTGACATCAGAGTGCTGGGAGGCCTTGTTCTCTCCCTCTGTCCCCTGACTCTCCATGTTTaGCCTGGAGGGCTTCTAGGT +
Preference number: 4 (lower is better)
Translates to: TYYSDIRVLGGLVLSLCPLTLHV*PGGLLG
Trigger: ACCTAGAAGCCCTCCAGGTCAAACATGGAGAGTCAG...GGGACAGAGGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp TGCTCTTCCTGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCATGGCGGTGAACCCTTaGGACTGTGGTGGGATCAGC +
Preference number: 4 (lower is better)
Translates to: CSSCAQAQHSRSQGIYQIMAVNP*DCGGIS
Trigger: GCTGATCCCACCACAGTCTCAAGGGTTCACCGCCAT...GATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGGAAGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR GCA 90 bp AGGATCCTGACTCAGCGGCTGGTGCTCTTCCTGTGCACAAGCCCAGCACTCCAGTGGTACAACCACAGATaGTCTCTTCCAGTCAAGAAC +
Preference number: 4 (lower is better)
Translates to: RILTQRLVLFLCTSPALQWYNHR*SLPVKN
Trigger: GTTCTTGACTGGAAGAGAGCATCTGTGGTTGTACCA...CTGGAGTGCTGGGCTTGTGCACAGGAAGAGCACCAGCCGCTGAGTCAGGATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR GCA 90 bp CCAGACCTCAAATGGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCCTGTCCGTTTCCAGCTCCCAGTCTaGGTCAGCACAGACCAGCAT +
Preference number: 4 (lower is better)
Translates to: PDLKWANTLLFSSSLPVRFQLPV*VSTDQH
Trigger: ATGCTGGTCTGTGCTGACGCAGACTGGGAGCTGGAA...ACGGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp AGGATCCTGACTCAGCGGCTGGTGCTCTTCCTGTGCACAAGCCCAGCACTCCAGTCCACCATGTGTGTTTaGTCTAGTGAAAGCCCATCT +
Preference number: 4 (lower is better)
Translates to: RILTQRLVLFLCTSPALQSTMCV*SSESPS
Trigger: AGATGGGCTTTCACTAGACCAAACACACATGGTGGA...CTGGAGTGCTGGGCTTGTGCACAGGAAGAGCACCAGCCGCTGAGTCAGGATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CCA 90 bp CCAGACCTCAAATGGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCCTGTCCGTCTGACATCAGAGTGCTaGGAGGCCTTGTTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: PDLKWANTLLFSSSLPVRLTSEC*EALFSP
Trigger: GGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAG...ACGGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CCA 90 bp AGGATCCTGACTCAGCGGCTGGTGCTCTTCCTGTGCACAAGCCCAGCACTCCAGGCAAACAGATTCCTCTaGAGGTTTCTGAGTCATCTG +
Preference number: 4 (lower is better)
Translates to: RILTQRLVLFLCTSPALQANRFL*RFLSHL
Trigger: CAGATGACTCAGAAACCTCCAGAGGAATCTGTTTGC...CTGGAGTGCTGGGCTTGTGCACAGGAAGAGCACCAGCCGCTGAGTCAGGATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp GCAGCTCAGAAATACACGAACAATAAAGTGGAGTCCCTAGCCCACTCTGAATCCTGTGCCAGGGCTGCTTaGGGAACAGCCCACTGTGGC +
Preference number: 4 (lower is better)
Translates to: AAQKYTNNKVESLAHSESCARAA*GTAHCG
Trigger: GCCACAGTGGGCTGTTCCCCAAGCAGCCCTGGCACA...GGATTCAGAGTGGGCTAGGGACTCCACTTTATTGTTCGTGTATTTCTGAGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp AGGTGGGTGCATGCCAAGATCCAAGTAGGTCAACCTTCCACCCTTAACCTACTAAGGAGGTCCAGGGCTTaGACAGAGCTCAGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: RWVHAKIQVGQPSTLNLLRRSRA*TELRGE
Trigger: CTCACCCCTGAGCTCTGTCCAAGCCCTGGACCTCCT...TAGTAGGTTAAGGGTGGAAGGTTGACCTACTTGGATCTTGGCATGCACCCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp TCCTGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCACTTGTGCTGTCTCCTTaGTGCGCAGTGTGTTCTGGT +
Preference number: 4 (lower is better)
Translates to: SCAQAQHSRSQGIYQIPPLVLSP*CAVCSG
Trigger: ACCAGAACACACTGCGCATCAAGGAGACAGCACAAG...TGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp ACCTACTACTCTGACATCAGAGTGCTGGGAGGCCTTGTTCTCTCCCTCTGTCCCTATAGACAGGAATGCTaGCATCGTAGCCTTGCCGGT +
Preference number: 4 (lower is better)
Translates to: TYYSDIRVLGGLVLSLCPYRQEC*HRSLAG
Trigger: ACCGGCAAGGCTACGATGTCAGCATTCCTGTCTATA...GGGACAGAGGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp ACCTACTACTCTGACATCAGAGTGCTGGGAGGCCTTGTTCTCTCCCTCTGTCCCAAGATCCACCTCAGCTaGCAGTGGACTATAGACAGG +
Preference number: 4 (lower is better)
Translates to: TYYSDIRVLGGLVLSLCPKIHLS*QWTIDR
Trigger: CCTGTCTATAGTCCACTGTCAGCTGAGGTGGATCTT...GGGACAGAGGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp CCAGACCTCAAATGGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCCTGTCCGTCTGACTCTCCATGTTTaGCCTGGAGGGCTTCTAGGT +
Preference number: 4 (lower is better)
Translates to: PDLKWANTLLFSSSLPVRLTLHV*PGGLLG
Trigger: ACCTAGAAGCCCTCCAGGTCAAACATGGAGAGTCAG...ACGGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp TCCTGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCATTGGTGATTAGCAGCTaGCCAGTTCTCTCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: SCAQAQHSRSQGIYQIPPLVISS*PVLSPG
Trigger: GCCAGGAGAGAGAACTGGTCAGCTGCTAATCACCAA...TGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358681.8
CDS-3UTR GCA 90 bp AGGATCCTGACTCAGCGGCTGGTGCTCTTCCTGTGCACAAGCCCAGCACTCCAGCCTCTGAGAGGTTGGTaGATTTATCGAGTACTAACA +
Preference number: 4 (lower is better)
Translates to: RILTQRLVLFLCTSPALQPLRGW*IYRVLT
Trigger: TGTTAGTACTCGATAAATGCACCAACCTCTCAGAGG...CTGGAGTGCTGGGCTTGTGCACAGGAAGAGCACCAGCCGCTGAGTCAGGATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR GCA 90 bp CCCCAGACCTCAAATGGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCCTGTCCCTGGGGCAAGAGAACTaGTCATTTGGTAATCCACCC +
Preference number: 4 (lower is better)
Translates to: PQTSNGLTRFSSPAVFLSLGQEN*SFGNPP
Trigger: GGGTGGATTACCAAATGAGCAGTTCTCTTGCCCCAG...GGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp TGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGACTTGGTCTTCATTCTTaGGATGAGGGCAGGACCCCG +
Preference number: 4 (lower is better)
Translates to: CAQAQHSRSQGIYQIPPRLGLHS*DEGRTP
Trigger: CGGGGTCCTGCCCTCATCCCAAGAATGAAGACCAAG...TCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CCA 90 bp ACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTACAGGGCCCTGTCTCTaGGGACATCCAGGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: TSPALQVPRHLSNPTKMFTGPCL*GHPGLC
Trigger: ACACAGCCCTGGATGTCCCCAGAGACAGGGCCCTGT...AAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CCA 90 bp CCCCAGACCTCAAATGGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCCTGTCCTCTCCATGTTTGACCTaGAGGGCTTCTAGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: PQTSNGLTRFSSPAVFLSSPCLT*RASRSS
Trigger: AGAGGACCTAGAAGCCCTCCAGGTCAAACATGGAGA...GGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CCA 90 bp ACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTCAGCGGGAGGAAGAGTaGATTGCTCACGCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: TSPALQVPRHLSNPTKMFQREEE*IAHAAP
Trigger: TGGGGCAGCGTGAGCAATCCACTCTTCCTCCCGCTG...AAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CCA 90 bp TCCTGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAGTGGCAAGGCCTGACTaGTGGCTTTGGTCTAAGACA +
Preference number: 4 (lower is better)
Translates to: SCAQAQHSRSQGIYQIPPVARPD*WLWSKT
Trigger: TGTCTTAGACCAAAGCCACCAGTCAGGCCTTGCCAC...TGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp CCCTTAACCTACTACTCTGACATCAGAGTGCTGGGAGGCCTTGTTCTCTCCCTCATGATCTGCCCGCTTTaGCCTCCCAAAATGCTGGGA +
Preference number: 4 (lower is better)
Translates to: PLTYYSDIRVLGGLVLSLMICPL*PPKMLG
Trigger: TCCCAGCATTTTGGGAGGCCAAAGCGGGCAGATCAT...GAGGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp GCAGCTCAGAAATACACGAACAATAAAGTGGAGTCCCTAGCCCACTCTGAATCCTCACCAGGCACCGGATaGACGCTCTCTGGACTCCTC +
Preference number: 4 (lower is better)
Translates to: AAQKYTNNKVESLAHSESSPGTG*TLSGLL
Trigger: GAGGAGTCCAGAGAGCGTCCATCCGGTGCCTGGTGA...GGATTCAGAGTGGGCTAGGGACTCCACTTTATTGTTCGTGTATTTCTGAGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR CAA 72 bp TCATATGCCTCCAGGCCCTGCAGTGGAAAGCTCAAGTaGCTTTCAAAGTCTCTCTGGATGGAAGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: SYASRPCSGKLK*LSKSLWMEAAA
Trigger: GGCAGCAGCTTCCATCCAGAGAGACTTTGAAAGCAACTTGAGCTTTCCACTGCAGGGCCTGGAGGCATATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp GAGCCTCAGCTGGATTTAAATCTGGAGCATGCCACAAAGTCTTCCACTTGGCATACATGCCAGTGGCAATaGGGCCCAGGAGGACAATGG +
Preference number: 4 (lower is better)
Translates to: EPQLDLNLEHATKSSTWHTCQWQ*GPGGQW
Trigger: CCATTGTCCTCCTGGGCCTCATTGCCACTGGCATGT...ATGCCAAGTGGAAGACTTTGTGGCATGCTCCAGATTTAAATCCAGCTGAGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp TCCTGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAGAATGGGGCCAAAACTaGAACATGCCAGTGGCAATG +
Preference number: 4 (lower is better)
Translates to: SCAQAQHSRSQGIYQIPPEWGQN*NMPVAM
Trigger: CATTGCCACTGGCATGTTTCAGTTTTGGCCCCATTC...TGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp CCTGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAAAAAAGCTGCCCCAGTaGGCACCATGGACACTTCAT +
Preference number: 4 (lower is better)
Translates to: PVHKPSTPGPKAFIKSHQKKLPQ*APWTLH
Trigger: ATGAAGTGTCCATGGTGCTCACTGGGGCAGCTTTTT...TTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGG
52% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp GCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCGAACTGACAGGATCCTaGCTCAGCGGCTGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: ALQVPRHLSNPTKMFGFCELTGS*LSGWCS
Trigger: AGAGCACCAGCCGCTGAGTCAGGATCCTGTCAGTTC...GCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp CCCTTAACCTACTACTCTGACATCAGAGTGCTGGGAGGCCTTGTTCTCTCCCTCAATAGCTCATGGAACTaGCAGGATCCTGACTCAGCG +
Preference number: 4 (lower is better)
Translates to: PLTYYSDIRVLGGLVLSLNSSWN*QDPDSA
Trigger: CGCTGAGTCAGGATCCTGTCAGTTCCATGAGCTATT...GAGGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp ATGGTGGCAAGGCCTGACTGGTGGCTTTGGTCTAAGACATATGGATCCCTCCTCAATAGCTCATGGAACTaGCAGGATCCTGACTCAGCG +
Preference number: 4 (lower is better)
Translates to: MVARPDWWLWSKTYGSLLNSSWN*QDPDSA
Trigger: CGCTGAGTCAGGATCCTGTCAGTTCCATGAGCTATT...GAGGAGGGATCCATATGTCTTAGACCAAAGCCACCAGTCAGGCCTTGCCACCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp CCCTTAACCTACTACTCTGACATCAGAGTGCTGGGAGGCCTTGTTCTCTCCCTCACCACCTGCAATTCCTaGGAGGTTGTCCACAAGATG +
Preference number: 4 (lower is better)
Translates to: PLTYYSDIRVLGGLVLSLTTCNS*EVVHKM
Trigger: CATCTTGTGGACAACCTCTCAGGAATTGCAGGTGGT...GAGGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp GGGTATCAGACATTCCTCCTGGCGTGTGTTCCCAGACATGGGCAGAAGACTGTTGCACATCACGGATGCTaGGCTTCTCTACATTCCAGT +
Preference number: 4 (lower is better)
Translates to: GYQTFLLACVPRHGQKTVAHHGC*ASLHSS
Trigger: ACTGGAATGTAGAGAAGCGCAGCATCCGTGATGTGC...AACAGTCTTCTGCCCATGTCTGGGAACACACGCCAGGAGGAATGTCTGATACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp AGGTGGGTGCATGCCAAGATCCAAGTAGGTCAACCTTCCACCCTTAACCTACTACCGGCACATCACGGATaGTGCGCTTCTCTACATTCC +
Preference number: 4 (lower is better)
Translates to: RWVHAKIQVGQPSTLNLLPAHHG*CASLHS
Trigger: GGAATGTAGAGAAGCGCAGCATCCGTGATGTGCCGG...TAGTAGGTTAAGGGTGGAAGGTTGACCTACTTGGATCTTGGCATGCACCCACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR GCA 90 bp TCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGGTGGATTGCTCACGCTaGCCCACTTCACAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: SRSQGIYQIPPRCLAFAPVDCSR*PTSQQE
Trigger: CTCCTGCTGTGAAGTGGGGCAGCGTGAGCAATCCAC...CGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR GCA 90 bp CCAGACCTCAAATGGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCCTGTCCGTAAACCAGCTGTTGTCTaGTGTAGGCCAGAACACGAC +
Preference number: 4 (lower is better)
Translates to: PDLKWANTLLFSSSLPVRKPAVV*CRPEHD
Trigger: GTCGTGTTCTGGCCTACAGCAGACAACAGCTGGTTT...ACGGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp AAGTGGCTGGAGGAGACATGGGGCCAGTTTAGCATTCTCTACTCTGCCTCTCTGGGCTTGAGCTTACAATaGCCTCACCCAGTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: KWLEETWGQFSILYSASLGLSLQ*PHPVFR
Trigger: TCTGAAGACTGGGTGAGGGCATTGTAAGCTCAAGCC...CAGAGAGGCAGAGTAGAGAATGCTAAACTGGCCCCATGTCTCCTCCAGCCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp CCTGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAACAATCTCAGCTCACTaGAAGCTCCACCTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: PVHKPSTPGPKAFIKSHQTISAH*KLHLSG
Trigger: ACCTGAGAGGTGGAGCTTGCAGTGAGCTGAGATTGT...TTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp AAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGAATTCTGGGTGACAGCAGCCAGCCATaGAGGGCCCTCACCAGGCAC +
Preference number: 4 (lower is better)
Translates to: KAFIKSHQDVWLLHRILGDSSQP*RALTRH
Trigger: GTGCCTGGTGAGGGCCCTGCATGGCTGGCTGCTGTC...ACCCAGAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp CTTCTCTTCTCCAGCAGTCTTCCTGTCCGTGAAGTTTCCTTCCAGATTGTTACAGATGGGACTGTCGGCTaGCAGCCTAACAACCGGCAC +
Preference number: 4 (lower is better)
Translates to: LLFSSSLPVREVSFQIVTDGTVG*QPNNRH
Trigger: GTGCCGGTTGTTAGGCTGCCAGCCGACAGTCCCATC...TGTAACAATCTGGAAGGAAACTTCACGGACAGGAAGACTGCTGGAGAAGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CCA 90 bp ACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTTCCCACCTAGAGAGCTaGGCCATCGCTTGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: TSPALQVPRHLSNPTKMFSHLES*AIACAV
Trigger: GACAGCACAAGCGATGGCCCAGCTCTCTAGGTGGGA...AAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CCA 90 bp GCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCTCCCACCTAGAGAGCTaGGCCATCGCTTGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: ALQVPRHLSNPTKMFGFCSHLES*AIACAV
Trigger: GACAGCACAAGCGATGGCCCAGCTCTCTAGGTGGGA...GCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CCA 90 bp CCTGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGTATTGCCGTGGACCTaGTCCTTTCTCTGGAAGATC +
Preference number: 4 (lower is better)
Translates to: PVHKPSTPGPKAFIKSHQVLPWT*SFLWKI
Trigger: GATCTTCCAGAGAAAGGACCAGGTCCACGGCAATAC...TTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CCA 90 bp TCCTGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAGTGAAAGCCCATCTATaGCTGTGCACTCAGGACACT +
Preference number: 4 (lower is better)
Translates to: SCAQAQHSRSQGIYQIPPVKAHL*LCTQDT
Trigger: AGTGTCCTGAGTGCACAGCCATAGATGGGCTTTCAC...TGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CCA 90 bp CATTCCTCCTGGCGTGTGTTCCCAGACATGGGCAGAAGACTGTTGTCAGGCCAATTGTTCTTGAGAAAGTaGGTTAGGTGGGTGCATGCC +
Preference number: 4 (lower is better)
Translates to: HSSWRVFPDMGRRLLSGQLFLRK*VRWVHA
Trigger: GGCATGCACCCACCTAACCCACTTTCTCAAGAACAA...TTGGCCTGACAACAGTCTTCTGCCCATGTCTGGGAACACACGCCAGGAGGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp TCCTGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAGTTCTCTCTCCTGGCTaGTTCCATGAAGAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: SCAQAQHSRSQGIYQIPPVLSPG*FHEELS
Trigger: AGACAGCTCTTCATGGAACCAGCCAGGAGAGAGAAC...TGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358681.8
CDS-3UTR CCA 90 bp TGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGACAAATTAGCCAGGCGTaGTGGCAAGCGCCTGTAATC +
Preference number: 4 (lower is better)
Translates to: CAQAQHSRSQGIYQIPPRQISQA*WQAPVI
Trigger: GATTACAGGCGCTTGCCACCACGCCTGGCTAATTTG...TCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp CCAGACCTCAAATGGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCCTGTCCGTCTTGGAAGGCTGAGATaGGAAGACTGCTTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: PDLKWANTLLFSSSLPVRLGRLR*EDCLSP
Trigger: TGGACTCAAGCAGTCTTCCCATCTCAGCCTTCCAAG...ACGGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp AAGTGGCTGGAGGAGACATGGGGCCAGTTTAGCATTCTCTACTCTGCCTCTCTGATCAGCCAGGTGTGGTaGTGCACGCTTTTAGTCTCA +
Preference number: 4 (lower is better)
Translates to: KWLEETWGQFSILYSASLISQVW*CTLLVS
Trigger: TGAGACTAAAAGCGTGCACCACCACACCTGGCTGAT...CAGAGAGGCAGAGTAGAGAATGCTAAACTGGCCCCATGTCTCCTCCAGCCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp ACCTACTACTCTGACATCAGAGTGCTGGGAGGCCTTGTTCTCTCCCTCTGTCCCTACATTCCAGTCATTTaGGGACTCGATAGAATGGGG +
Preference number: 4 (lower is better)
Translates to: TYYSDIRVLGGLVLSLCPYIPVI*GLDRMG
Trigger: CCCCATTCTATCGAGTCCTCAAATGACTGGAATGTA...GGGACAGAGGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp GGGTATCAGACATTCCTCCTGGCGTGTGTTCCCAGACATGGGCAGAAGACTGTTTGTCTGAGATGGCCATaGGCAGTTCATTATACTCCC +
Preference number: 4 (lower is better)
Translates to: GYQTFLLACVPRHGQKTVCLRWP*AVHYTP
Trigger: GGGAGTATAATGAACTGCTCATGGCCATCTCAGACA...AACAGTCTTCTGCCCATGTCTGGGAACACACGCCAGGAGGAATGTCTGATACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp TGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGAACAGACAGGCCCGGTTaGTGTCATCAGTGTAGTAGT +
Preference number: 4 (lower is better)
Translates to: CAQAQHSRSQGIYQIPPRTDRPG*CHQCSS
Trigger: ACTACTACACTGATGACATCAACCGGGCCTGTCTGT...TCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp ATGGTGGCAAGGCCTGACTGGTGGCTTTGGTCTAAGACATATGGATCCCTCCTCCTCCAGGCAACATGTTaGACAACAGGTGATTCGTAC +
Preference number: 4 (lower is better)
Translates to: MVARPDWWLWSKTYGSLLLQATC*TTGDSY
Trigger: GTACGAATCACCTGTTGTTCAACATGTTGCCTGGAG...GAGGAGGGATCCATATGTCTTAGACCAAAGCCACCAGTCAGGCCTTGCCACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp AGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGATGGCGGTGAACCCTTaGGACTGTGGTGGGATCAGC +
Preference number: 4 (lower is better)
Translates to: STPGPKAFIKSHQDVWLLMAVNP*DCGGIS
Trigger: GCTGATCCCACCACAGTCTCAAGGGTTCACCGCCAT...CAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp TGCTCTTCCTGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCAAAAAGCTGCCCCAGTaGGCACCATGGACACTTCAT +
Preference number: 4 (lower is better)
Translates to: CSSCAQAQHSRSQGIYQIKKLPQ*APWTLH
Trigger: ATGAAGTGTCCATGGTGCTCACTGGGGCAGCTTTTT...GATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGGAAGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp GTGCTTGTCAGCCTCTGGTACCTGGGTGACAACAGAAATATTTTTCCTGGCTTTGGTGTTCCACCACCTTaGGAGGCATGGTCCCGAAGA +
Preference number: 4 (lower is better)
Translates to: VLVSLWYLGDNRNIFPGFGVPPP*EAWSRR
Trigger: TCTTCGGGACCATGCCTCTCAAGGTGGTGGAACACC...AAAGCCAGGAAAAATATTTCTGTTGTCACCCAGGTACCAGAGGCTGACAAGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp CAACTGTTGCAAAGCAGTTGTATAGCAGCATTTAACGTTAGCCAGAACCTCCCTGGCGTGCAGATCACCTaGGGTCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: QLLQSSCIAAFNVSQNLPGVQIT*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAGGTGATCTGCACGCC...AGGGAGGTTCTGGCTAACGTTAAATGCTGCTATACAACTGCTTTGCAACAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp AGGTGGGTGCATGCCAAGATCCAAGTAGGTCAACCTTCCACCCTTAACCTACTACCAGCTGGAAGTAGATaGGGCTTTGGCAGAGAAACC +
Preference number: 4 (lower is better)
Translates to: RWVHAKIQVGQPSTLNLLPAGSR*GFGRET
Trigger: GGTTTCTCTGCCAAAGCCTCATCTACTTCCAGCTGG...TAGTAGGTTAAGGGTGGAAGGTTGACCTACTTGGATCTTGGCATGCACCCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp TCCTGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCACTGCCTGGTACTTCTTaGGAACTACCTTGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: SCAQAQHSRSQGIYQIPPLPGTS*ELPCLL
Trigger: CAGAAGACAAGGTAGTTCTCAAGAAGTACCAGGCAG...TGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp TGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGAGAGAGGAGATCAAGGTaGGCCCCCAATGATCTACTA +
Preference number: 4 (lower is better)
Translates to: CAQAQHSRSQGIYQIPPRERRSR*APNDLL
Trigger: TAGTAGATCATTGGGGGCTCACCTTGATCTCCTCTC...TCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp ATGATTCCCCAGACCTCAAATGGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCTCACAGCCCAAGGTGTaGAACAATGTCGTGTCCTGC +
Preference number: 4 (lower is better)
Translates to: MIPQTSNGLTRFSSPAVFSQPKV*NNVVSC
Trigger: GCAGGACACGACATTGTTTCACACCTTGGGCTGTGA...GAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGGGGAATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp TCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGCCGGCACATCACGGATaGTGCGCTTCTCTACATTCC +
Preference number: 4 (lower is better)
Translates to: SRSQGIYQIPPRCLAFAPPAHHG*CASLHS
Trigger: GGAATGTAGAGAAGCGCAGCATCCGTGATGTGCCGG...CGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR GCA 90 bp CCCTTAACCTACTACTCTGACATCAGAGTGCTGGGAGGCCTTGTTCTCTCCCTCCTTGTGATAAAAAGCTaGCCCAGTGAGCACCATGGA +
Preference number: 4 (lower is better)
Translates to: PLTYYSDIRVLGGLVLSLLVIKS*PSEHHG
Trigger: TCCATGGTGCTCACTGGGGCAGCTTTTTATCACAAG...GAGGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR GCA 90 bp TCCTGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAGGTTACCTTGATAACTaGTTTTCCCGTGACGTTGGC +
Preference number: 4 (lower is better)
Translates to: SCAQAQHSRSQGIYQIPPGYLDN*FSRDVG
Trigger: GCCAACGTCACGGGAAAAGCAGTTATCAAGGTAACC...TGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR GCA 90 bp ACCTACTACTCTGACATCAGAGTGCTGGGAGGCCTTGTTCTCTCCCTCTGTCCCACACGTTTCATAAGCTaGCAATGTTGGGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: TYYSDIRVLGGLVLSLCPTRFIS*QCWGSS
Trigger: AGAGCTTCCCCAACATTGGCAGCTTATGAAACGTGT...GGGACAGAGGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR GCA 90 bp AGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCTGGTGCTCTTCCTGTaGACAAGCCCAGCACTCCAG +
Preference number: 4 (lower is better)
Translates to: STPGPKAFIKSHQDVWLLLVLFL*TSPALQ
Trigger: CTGGAGTGCTGGGCTTGTGCACAGGAAGAGCACCAG...CAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR GCA 90 bp AGCATGCCACAAAGTCTTCCACTTGGCATTTTCGAGAAGAACCCATCAGAGATCCTGGTGCTCTTCCTGTaGACAAGCCCAGCACTCCAG +
Preference number: 4 (lower is better)
Translates to: SMPQSLPLGIFEKNPSEILVLFL*TSPALQ
Trigger: CTGGAGTGCTGGGCTTGTGCACAGGAAGAGCACCAG...GATCTCTGATGGGTTCTTCTCGAAAATGCCAAGTGGAAGACTTTGTGGCATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR GCA 90 bp TTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGAATTCTGGGTTTGGTTCGCCAGTGGCTCAGTGTaGACTTGGGCCAGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: LSNPTKMFGFCTEFWVWFASGSV*TWARAS
Trigger: ACTGGCCCTGGCCCAAGTGCACACTGAGCCACTGGC...GAACCAAACCCAGAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp CACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCATGGGAGGTCAAGGCGTaGAGATCACCTGAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: HSRSQGIYQIPPRCLAFAWEVKA*RSPEVR
Trigger: CCTGACCTCAGGTGATCTGCACGCCTTGACCTCCCA...TGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp GATTCCCCAGACCTCAAATGGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCCTTGTGGCTTCTCTTGCTaGAATGGAAGAGTACCCGAG +
Preference number: 4 (lower is better)
Translates to: DSPDLKWANTLLFSSSLPCGFSC*NGRVPE
Trigger: CTCGGGTACTCTTCCATTGCAGCAAGAGAAGCCACA...AGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGGGGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp AGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACTCCTGCCAGAACTaGTCCTCAGGAAGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: STPGPKAFIKSHQDVWLLHSCQN*SSGSGW
Trigger: CCAGCCACTTCCTGAGGAGCAGTTCTGGCAGGAGTG...CAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp CCAGACCTCAAATGGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCCTGTCCGTTCTAGCAGACACAGCTaGCTGGTACTTCTTGAGAAC +
Preference number: 4 (lower is better)
Translates to: PDLKWANTLLFSSSLPVRSSRHS*LVLLEN
Trigger: GTTCTCAAGAAGTACCAGGCAGCTGTGTCTGCTAGA...ACGGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp AGGATCCTGACTCAGCGGCTGGTGCTCTTCCTGTGCACAAGCCCAGCACTCCAGTCCTTGAATTCTCCATaGATTAGACAAGATGGAGTT +
Preference number: 4 (lower is better)
Translates to: RILTQRLVLFLCTSPALQSLNSP*IRQDGV
Trigger: AACTCCATCTTGTCTAATGCATGGAGAATTCAAGGA...CTGGAGTGCTGGGCTTGTGCACAGGAAGAGCACCAGCCGCTGAGTCAGGATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp CATTCCTCCTGGCGTGTGTTCCCAGACATGGGCAGAAGACTGTTGTCAGGCCAAGGAGATGGCAGCATATaGATAGATCCGGTCATTGAT +
Preference number: 4 (lower is better)
Translates to: HSSWRVFPDMGRRLLSGQGDGSI*IDPVID
Trigger: ATCAATGACCGGATCTATCCATATGCTGCCATCTCC...TTGGCCTGACAACAGTCTTCTGCCCATGTCTGGGAACACACGCCAGGAGGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp ACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGAACCCTTGAGACTGTaGTGGGATCAGCGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: TSPALQVPRHLSNPTKMFEPLRL*WDQREE
Trigger: TTCCTCCCGCTGATCCCACCACAGTCTCAAGGGTTC...AAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CCA 90 bp CCTGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAATGGAACCCGGATTTTaGGCCAGAGAGAATCTTCTG +
Preference number: 4 (lower is better)
Translates to: PVHKPSTPGPKAFIKSHQMEPGF*ARENLL
Trigger: CAGAAGATTCTCTCTGGCCCAAAATCCGGGTTCCAT...TTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CCA 90 bp ACCTACTACTCTGACATCAGAGTGCTGGGAGGCCTTGTTCTCTCCCTCTGTCCCATAAGCTGCCAATGTTaGGGAAGCTCTTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: TYYSDIRVLGGLVLSLCPISCQC*GSSSAS
Trigger: AGAAGCTGAAGAGCTTCCCCAACATTGGCAGCTTAT...GGGACAGAGGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CCA 90 bp ACCTACTACTCTGACATCAGAGTGCTGGGAGGCCTTGTTCTCTCCCTCTGTCCCATCAAGGGAGAAAGGTaGTTCCTTGGACTATCAGGA +
Preference number: 4 (lower is better)
Translates to: TYYSDIRVLGGLVLSLCPIKGER*FLGLSG
Trigger: TCCTGATAGTCCAAGGAACCACCTTTCTCCCTTGAT...GGGACAGAGGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp ACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCATCCCCTTGGGATaGGGGTCACAATTCCCACAA +
Preference number: 4 (lower is better)
Translates to: TSPALQVPRHLSNPTKMFGIPLG*GSQFPQ
Trigger: TTGTGGGAATTGTGACCCCCATCCCAAGGGGATGCC...AAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp CGCTTCTCTTCTCCAGCAGTCTTCCTGTCCGTGAAGTTTCCTTCCAGATTGTTAGGGAACAGCCCACTGTaGCTTCTCTTGCTGCAATGG +
Preference number: 4 (lower is better)
Translates to: RFSSPAVFLSVKFPSRLLGNSPL*LLLLQW
Trigger: CCATTGCAGCAAGAGAAGCCACAGTGGGCTGTTCCC...TAACAATCTGGAAGGAAACTTCACGGACAGGAAGACTGCTGGAGAAGAGAAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp CGCTTCTCTTCTCCAGCAGTCTTCCTGTCCGTGAAGTTTCCTTCCAGATTGTTAACCCTCCCAGGAAATTaGGGAAGCTGGGCATCCCTA +
Preference number: 4 (lower is better)
Translates to: RFSSPAVFLSVKFPSRLLTLPGN*GSWASL
Trigger: TAGGGATGCCCAGCTTCCCCAATTTCCTGGGAGGGT...TAACAATCTGGAAGGAAACTTCACGGACAGGAAGACTGCTGGAGAAGAGAAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp TGTTCTCTTCCCTCATCTGGATCAGTAACTAGTTGGTTGGTCTTCAGCTGTGCTCGGATGGACGCTCTCTaGACTCCTCAAAAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: CSLPSSGSVTSWLVFSCARMDAL*TPQKRP
Trigger: GGGCCTCTTTTGAGGAGTCCAGAGAGCGTCCATCCG...AGCACAGCTGAAGACCAACCAACTAGTTACTGATCCAGATGAGGGAAGAGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp ATGATTCCCCAGACCTCAAATGGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCGAATGGGGCCAAAACTaGAACATGCCAGTGGCAATG +
Preference number: 4 (lower is better)
Translates to: MIPQTSNGLTRFSSPAVFEWGQN*NMPVAM
Trigger: CATTGCCACTGGCATGTTTCAGTTTTGGCCCCATTC...GAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGGGGAATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp AGGTGGGTGCATGCCAAGATCCAAGTAGGTCAACCTTCCACCCTTAACCTACTAGTAGTAGTCACTGTCTaGGATGGCCATGAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: RWVHAKIQVGQPSTLNLLVVVTV*DGHEQF
Trigger: GAACTGCTCATGGCCATCTCAGACAGTGACTACTAC...TAGTAGGTTAAGGGTGGAAGGTTGACCTACTTGGATCTTGGCATGCACCCACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp TGCTCTTCCTGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCATGGTCCCGAAGACTaGAGCAAACTTGTTGATGCA +
Preference number: 4 (lower is better)
Translates to: CSSCAQAQHSRSQGIYQIHGPED*SKLVDA
Trigger: TGCATCAACAAGTTTGCTTCAGTCTTCGGGACCATG...GATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGGAAGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp GTCAACCTTCCACCCTTAACCTACTACTCTGACATCAGAGTGCTGGGAGGCCTTCATGGTCCCGAAGACTaGAGCAAACTTGTTGATGCA +
Preference number: 4 (lower is better)
Translates to: VNLPPLTYYSDIRVLGGLHGPED*SKLVDA
Trigger: TGCATCAACAAGTTTGCTTCAGTCTTCGGGACCATG...AAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAGGGTGGAAGGTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp ATGATTCCCCAGACCTCAAATGGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCCTTAACCTACTACTCTaGCATCAGAGTGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: MIPQTSNGLTRFSSPAVFLNLLL*HQSAGR
Trigger: CCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAG...GAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGGGGAATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp GTCAACCTTCCACCCTTAACCTACTACTCTGACATCAGAGTGCTGGGAGGCCTTCTAGGTTCTTGTTCTTaGGAAAGTGGGTTAGGTGGG +
Preference number: 4 (lower is better)
Translates to: VNLPPLTYYSDIRVLGGLLGSCS*ESGLGG
Trigger: CCCACCTAACCCACTTTCTCAAGAACAAGAACCTAG...AAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAGGGTGGAAGGTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp GATTCCCCAGACCTCAAATGGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCCTTGGGTACCCTTTACATaGTTCCCCAGACCTCAAATG +
Preference number: 4 (lower is better)
Translates to: DSPDLKWANTLLFSSSLPWVPFT*FPRPQM
Trigger: CATTTGAGGTCTGGGGAATCATGTAAAGGGTACCCA...AGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGGGGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp TGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGAAGGGAGTTCATTTGGTaGTTAGCAGCTGACCAGTTC +
Preference number: 4 (lower is better)
Translates to: CAQAQHSRSQGIYQIPPRREFIW*LAADQF
Trigger: GAACTGGTCAGCTGCTAATCACCAAATGAACTCCCT...TCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358681.8
CDS-3UTR TCA 90 bp CCAGACCTCAAATGGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCCTGTCCGTGTCATTGATAATCTGTaGATCCCACTGTTCCCTAGG +
Preference number: 4 (lower is better)
Translates to: PDLKWANTLLFSSSLPVRVIDNL*IPLFPR
Trigger: CCTAGGGAACAGTGGGATTCACAGATTATCAATGAC...ACGGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358681.8
CDS-3UTR TCA 90 bp TGCTCTTCCTGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCGAAACCAGGGCAATATaGCACATACACAATGCCAGC +
Preference number: 4 (lower is better)
Translates to: CSSCAQAQHSRSQGIYQIETRAI*HIHNAS
Trigger: GCTGGCATTGTGTATGTGTCATATTGCCCTGGTTTC...GATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGGAAGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp CACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACTCATGATGGGTGGCTaGTGGGAAGTCTCCAACACC +
Preference number: 4 (lower is better)
Translates to: HSRSQGIYQIPPRCLAFALMMGG*WEVSNT
Trigger: GGTGTTGGAGACTTCCCATCAGCCACCCATCATGAG...TGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp TGCTCTTCCTGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCAGGCCTGTTCACAGATaGTGCATGGCTGGTATAATG +
Preference number: 4 (lower is better)
Translates to: CSSCAQAQHSRSQGIYQIRPVHR*CMAGIM
Trigger: CATTATACCAGCCATGCATCATCTGTGAACAGGCCT...GATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGGAAGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp CAAGGGAGAAAGGTGGTTCCTTGGACTATCAGGAATTGGTGTTTAAGACACAGTCTGGGCCATCGCTTGTaGTGTCTCCTTGATGCGCAG +
Preference number: 4 (lower is better)
Translates to: QGRKVVPWTIRNWCLRHSLGHRL*CLLDAQ
Trigger: CTGCGCATCAAGGAGACAGCACAAGCGATGGCCCAG...ACTGTGTCTTAAACACCAATTCCTGATAGTCCAAGGAACCACCTTTCTCCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp TCAAATGGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCCTGTCCGTGAAGTTTGACAGGAGGAAGTATTaGCGTGGACCTGGTCCTTTC +
Preference number: 4 (lower is better)
Translates to: SNGLTRFSSPAVFLSVKFDRRKY*RGPGPF
Trigger: GAAAGGACCAGGTCCACGGCAATACTTCCTCCTGTC...AAACTTCACGGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR GCA 90 bp AGGTGCTTGGATATTCATTCTAGGTTCTTGTTCTTGAGAAAGTGGGTTAGGTGGCACATCGCTCAATACTaGCTGGCCCAGCCGAGCTCC +
Preference number: 4 (lower is better)
Translates to: RCLDIHSRFLFLRKWVRWHIAQY*LAQPSS
Trigger: GGAGCTCGGCTGGGCCAGGCAGTATTGAGCGATGTG...CCACCTAACCCACTTTCTCAAGAACAAGAACCTAGAATGAATATCCAAGCACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR GCA 90 bp GTTCCCAGACATGGGCAGAAGACTGTTGTCAGGCCAAAGACGGAGTTAAATATAGGAGGAAGAGTGGATTaGTCACGCTGCCCCACTTCA +
Preference number: 4 (lower is better)
Translates to: VPRHGQKTVVRPKTELNIGGRVD*SRCPTS
Trigger: TGAAGTGGGGCAGCGTGAGCAATCCACTCTTCCTCC...TATATTTAACTCCGTCTTTGGCCTGACAACAGTCTTCTGCCCATGTCTGGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp GGGTATCAGACATTCCTCCTGGCGTGTGTTCCCAGACATGGGCAGAAGACTGTTACACGTTTCATAAGCTaGCAATGTTGGGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: GYQTFLLACVPRHGQKTVTRFIS*QCWGSS
Trigger: AGAGCTTCCCCAACATTGGCAGCTTATGAAACGTGT...AACAGTCTTCTGCCCATGTCTGGGAACACACGCCAGGAGGAATGTCTGATACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp ACCTACTACTCTGACATCAGAGTGCTGGGAGGCCTTGTTCTCTCCCTCTGTCCCTTGCATAGCTCGAGGTaGTTGGATATTCATTCTAGG +
Preference number: 4 (lower is better)
Translates to: TYYSDIRVLGGLVLSLCPLHSSR*LDIHSR
Trigger: CCTAGAATGAATATCCAAGCACCTCGAGCTATGCAA...GGGACAGAGGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR GCA 90 bp GCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCGCTAGAGCGACTCCTTaGATGGCTAGTACAGACCCT +
Preference number: 4 (lower is better)
Translates to: ALQVPRHLSNPTKMFGFCARATP*MASTDP
Trigger: AGGGTCTGTACTAGCCATGCAAGGAGTCGCTCTAGC...GCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp GAGCCTCAGCTGGATTTAAATCTGGAGCATGCCACAAAGTCTTCCACTTGGCATTTCCTCCTGGCATGGTaGCTGTCAGAGGCTATCATC +
Preference number: 4 (lower is better)
Translates to: EPQLDLNLEHATKSSTWHFLLAW*LSEAII
Trigger: GATGATAGCCTCTGACAGGCACCATGCCAGGAGGAA...ATGCCAAGTGGAAGACTTTGTGGCATGCTCCAGATTTAAATCCAGCTGAGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp CCTGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGGACTAAAACATACATaGTTAGAGTCCTGGGCCACT +
Preference number: 4 (lower is better)
Translates to: PVHKPSTPGPKAFIKSHQGLKHT*LESWAT
Trigger: AGTGGCCCAGGACTCTAAGCATGTATGTTTTAGTCC...TTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp GGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGAATTCTGGGTTTGATGGGACTGTCGGCTaGCAGCCTAACAACCGGCAC +
Preference number: 4 (lower is better)
Translates to: GIYQIPPRCLAFAPNSGFDGTVG*QPNNRH
Trigger: GTGCCGGTTGTTAGGCTGCCAGCCGACAGTCCCATC...AAACCCAGAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CCA 90 bp TTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGAATTCTGGGTTTGGTTCACAGGGCCCTGTCTCTaGGGACATCCAGGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: LSNPTKMFGFCTEFWVWFTGPCL*GHPGLC
Trigger: ACACAGCCCTGGATGTCCCCAGAGACAGGGCCCTGT...GAACCAAACCCAGAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CCA 90 bp GCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCGAGGAAGTATTGCCGTaGACCTGGTCCTTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: ALQVPRHLSNPTKMFGFCEEVLP*TWSFLW
Trigger: CCAGAGAAAGGACCAGGTCCACGGCAATACTTCCTC...GCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CCA 90 bp AGGTGGGTGCATGCCAAGATCCAAGTAGGTCAACCTTCCACCCTTAACCTACTATCTCCATGTTTGACCTaGAGGGCTTCTAGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: RWVHAKIQVGQPSTLNLLSPCLT*RASRSS
Trigger: AGAGGACCTAGAAGCCCTCCAGGTCAAACATGGAGA...TAGTAGGTTAAGGGTGGAAGGTTGACCTACTTGGATCTTGGCATGCACCCACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CCA 90 bp ACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTAAGACCTGGTGCTTGTaGCAGCGCTTACGGACAGAA +
Preference number: 4 (lower is better)
Translates to: TSPALQVPRHLSNPTKMFKTWCL*QRLRTE
Trigger: TTCTGTCCGTAAGCGCTGCCACAAGCACCAGGTCTT...AAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CCA 90 bp CAACTGTTGCAAAGCAGTTGTATAGCAGCATTTAACGTTAGCCAGAACCTCCCTCCCTTGAGACTGTGGTaGGATCAGCGGGAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: QLLQSSCIAAFNVSQNLPPLRLW*DQREEE
Trigger: CTCTTCCTCCCGCTGATCCCACCACAGTCTCAAGGG...AGGGAGGTTCTGGCTAACGTTAAATGCTGCTATACAACTGCTTTGCAACAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp GTCAACCTTCCACCCTTAACCTACTACTCTGACATCAGAGTGCTGGGAGGCCTTGTAGTTTGGATAGACTaGGCACCTTGGACACTTCAG +
Preference number: 4 (lower is better)
Translates to: VNLPPLTYYSDIRVLGGLVVWID*APWTLQ
Trigger: CTGAAGTGTCCAAGGTGCCCAGTCTATCCAAACTAC...AAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAGGGTGGAAGGTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CCA 90 bp GTCAACCTTCCACCCTTAACCTACTACTCTGACATCAGAGTGCTGGGAGGCCTTAGACGACAAGTAGTTTaGATAGACTGGGCACCTTGG +
Preference number: 4 (lower is better)
Translates to: VNLPPLTYYSDIRVLGGLRRQVV*IDWAPW
Trigger: CCAAGGTGCCCAGTCTATCCAAACTACTTGTCGTCT...AAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAGGGTGGAAGGTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CCA 90 bp AGGTGGGTGCATGCCAAGATCCAAGTAGGTCAACCTTCCACCCTTAACCTACTAGTGAAAGCCCATCTATaGCTGTGCACTCAGGACACT +
Preference number: 4 (lower is better)
Translates to: RWVHAKIQVGQPSTLNLLVKAHL*LCTQDT
Trigger: AGTGTCCTGAGTGCACAGCCATAGATGGGCTTTCAC...TAGTAGGTTAAGGGTGGAAGGTTGACCTACTTGGATCTTGGCATGCACCCACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CCA 90 bp AAGTGGCTGGAGGAGACATGGGGCCAGTTTAGCATTCTCTACTCTGCCTCTCTGTCCACCATGTGTGTTTaGTCTAGTGAAAGCCCATCT +
Preference number: 4 (lower is better)
Translates to: KWLEETWGQFSILYSASLSTMCV*SSESPS
Trigger: AGATGGGCTTTCACTAGACCAAACACACATGGTGGA...CAGAGAGGCAGAGTAGAGAATGCTAAACTGGCCCCATGTCTCCTCCAGCCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp GTTCCCAGACATGGGCAGAAGACTGTTGTCAGGCCAAAGACGGAGTTAAATATACTGACATCAGAGTGCTaGGAGGCCTTGTTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: VPRHGQKTVVRPKTELNILTSEC*EALFSP
Trigger: GGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAG...TATATTTAACTCCGTCTTTGGCCTGACAACAGTCTTCTGCCCATGTCTGGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp GCAGCTCAGAAATACACGAACAATAAAGTGGAGTCCCTAGCCCACTCTGAATCCGAGCGACTCCTTGCATaGCTAGTACAGACCCTCTGT +
Preference number: 4 (lower is better)
Translates to: AAQKYTNNKVESLAHSESERLLA*LVQTLC
Trigger: ACAGAGGGTCTGTACTAGCCATGCAAGGAGTCGCTC...GGATTCAGAGTGGGCTAGGGACTCCACTTTATTGTTCGTGTATTTCTGAGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp TGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGGGGACATATGTTGTaGCTAAAGCCCAAACTGTGG +
Preference number: 4 (lower is better)
Translates to: CAQAQHSRSQGIYQIPPRWGHML*LKPKLW
Trigger: CCACAGTTTGGGCTTTAGCCACAACATATGTCCCCA...TCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp CCCTTAACCTACTACTCTGACATCAGAGTGCTGGGAGGCCTTGTTCTCTCCCTCCAACAGAACAATGGATaGTGTATGACTGACGCTGAC +
Preference number: 4 (lower is better)
Translates to: PLTYYSDIRVLGGLVLSLQQNNG*CMTDAD
Trigger: GTCAGCGTCAGTCATACACCATCCATTGTTCTGTTG...GAGGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp TCCTGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAATGGGTGAGGTTTGCTaGTTAGCAGCTCAGAAATAC +
Preference number: 4 (lower is better)
Translates to: SCAQAQHSRSQGIYQIPPMGEVC*LAAQKY
Trigger: GTATTTCTGAGCTGCTAACCAGCAAACCTCACCCAT...TGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp GCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGAATTCTGGGTTTGTGGGGGCAAAGCCAGTaGCTCAGTGTGCACTTGGGC +
Preference number: 4 (lower is better)
Translates to: AFIKSHQDVWLLHRILGLWGQSQ*LSVHLG
Trigger: GCCCAAGTGCACACTGAGCCACTGGCTTTGCCCCCA...CAAACCCAGAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp AGGTGGGTGCATGCCAAGATCCAAGTAGGTCAACCTTCCACCCTTAACCTACTAAAGTATTTCCAGCCCTaGCATTCCAAGCAGGCCCAT +
Preference number: 4 (lower is better)
Translates to: RWVHAKIQVGQPSTLNLLKYFQP*HSKQAH
Trigger: ATGGGCCTGCTTGGAATGCCAGGGCTGGAAATACTT...TAGTAGGTTAAGGGTGGAAGGTTGACCTACTTGGATCTTGGCATGCACCCACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp AGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGAGAGGCCTGGAAGCTTaGGAGAGGGGGCCAAACTTT +
Preference number: 4 (lower is better)
Translates to: STPGPKAFIKSHQDVWLLRGLEA*ERGPNF
Trigger: AAAGTTTGGCCCCCTCTCCCAAGCTTCCAGGCCTCT...CAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp GGGTATCAGACATTCCTCCTGGCGTGTGTTCCCAGACATGGGCAGAAGACTGTTGCTGTCTCCAATTTCTaGCTGAGGAAACTAAGGCAT +
Preference number: 4 (lower is better)
Translates to: GYQTFLLACVPRHGQKTVAVSNF*LRKLRH
Trigger: ATGCCTTAGTTTCCTCAGCCAGAAATTGGAGACAGC...AACAGTCTTCTGCCCATGTCTGGGAACACACGCCAGGAGGAATGTCTGATACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp ATCACTGGCAGGAAAGAACACAAGATTCTGACAACTAAAGTTGCTGTTTTTCTCGGGCCGGAAGAGGGCTaGCTGCCAGCATCACCAGGT +
Preference number: 4 (lower is better)
Translates to: ITGRKEHKILTTKVAVFLGPEEG*LPASPG
Trigger: ACCTGGTGATGCTGGCAGCCAGCCCTCTTCCGGCCC...GAGAAAAACAGCAACTTTAGTTGTCAGAATCTTGTGTTCTTTCCTGCCAGTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp CGCTTCTCTTCTCCAGCAGTCTTCCTGTCCGTGAAGTTTCCTTCCAGATTGTTAGCACAGGAAAGGGACTaGGGCAAGAGAACTGCTCAT +
Preference number: 4 (lower is better)
Translates to: RFSSPAVFLSVKFPSRLLAQERD*GKRTAH
Trigger: ATGAGCAGTTCTCTTGCCCCAGTCCCTTTCCTGTGC...TAACAATCTGGAAGGAAACTTCACGGACAGGAAGACTGCTGGAGAAGAGAAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp AAGTGGCTGGAGGAGACATGGGGCCAGTTTAGCATTCTCTACTCTGCCTCTCTGCAGGACAAGGTATTTTaGTGCAGGGTAGACAGAAGA +
Preference number: 4 (lower is better)
Translates to: KWLEETWGQFSILYSASLQDKVF*CRVDRR
Trigger: TCTTCTGTCTACCCTGCACCAAAATACCTTGTCCTG...CAGAGAGGCAGAGTAGAGAATGCTAAACTGGCCCCATGTCTCCTCCAGCCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp CTTCTCTTCTCCAGCAGTCTTCCTGTCCGTGAAGTTTCCTTCCAGATTGTTACATCTTCATTCTTGGGATaGGGGCAGGACCCCGGATAT +
Preference number: 4 (lower is better)
Translates to: LLFSSSLPVREVSFQIVTSSFLG*GQDPGY
Trigger: ATATCCGGGGTCCTGCCCTCATCCCAAGAATGAAGA...TGTAACAATCTGGAAGGAAACTTCACGGACAGGAAGACTGCTGGAGAAGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp CATGCCACAAAGTCTTCCACTTGGCATTTTCGAGAAGAACCCATCAGAGATCATGAGACCCACCTGAGATaGCAGGAGGAAGTATTGCCG +
Preference number: 4 (lower is better)
Translates to: HATKSSTWHFREEPIRDHETHLR*QEEVLP
Trigger: CGGCAATACTTCCTCCTGTCATCTCAGGTGGGTCTC...ATGATCTCTGATGGGTTCTTCTCGAAAATGCCAAGTGGAAGACTTTGTGGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp CCCAGACATGGGCAGAAGACTGTTGTCAGGCCAAAGACGGAGTTAAATATATCATATAGGAGTCTGCAATaGCAACCGGGACACAGCCAG +
Preference number: 4 (lower is better)
Translates to: PRHGQKTVVRPKTELNISYRSLQ*QPGHSQ
Trigger: CTGGCTGTGTCCCGGTTGTCATTGCAGACTCCTATA...TGATATATTTAACTCCGTCTTTGGCCTGACAACAGTCTTCTGCCCATGTCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp TGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGCACTCAGGACACTTaGATTTCTTTCGTGGGGTTA +
Preference number: 4 (lower is better)
Translates to: CAQAQHSRSQGIYQIPPRCTQDT*ISFVGL
Trigger: TAACCCCACGAAAGAAATTCAAGTGTCCTGAGTGCA...TCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp ATGATTCCCCAGACCTCAAATGGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCTGGGTACCCTTTACATaGTTCCCCAGACCTCAAATG +
Preference number: 4 (lower is better)
Translates to: MIPQTSNGLTRFSSPAVFWVPFT*FPRPQM
Trigger: CATTTGAGGTCTGGGGAATCATGTAAAGGGTACCCA...GAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGGGGAATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp GAGCCTCAGCTGGATTTAAATCTGGAGCATGCCACAAAGTCTTCCACTTGGCATTCCTGGCTGGTTCCATaGAGAGCTGTCTCTGCATTT +
Preference number: 4 (lower is better)
Translates to: EPQLDLNLEHATKSSTWHSWLVP*RAVSAF
Trigger: AAATGCAGAGACAGCTCTTCATGGAACCAGCCAGGA...ATGCCAAGTGGAAGACTTTGTGGCATGCTCCAGATTTAAATCCAGCTGAGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358681.8
CDS-3UTR TCA 90 bp TCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGCCCACTCTGAATCCATaGATCGCCATCACCTGCTAT +
Preference number: 4 (lower is better)
Translates to: SRSQGIYQIPPRCLAFAPPTLNP*IAITCY
Trigger: ATAGCAGGTGATGGCGATTCATGGATTCAGAGTGGG...CGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp GTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGAATTCAACACACCAGGCTCATaGTGGGTGGCTGATGGGAAG +
Preference number: 4 (lower is better)
Translates to: VPRHLSNPTKMFGFCTEFNTPGS*WVADGK
Trigger: CTTCCCATCAGCCACCCATCATGAGCCTGGTGTGTT...GAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp AAGTGGCTGGAGGAGACATGGGGCCAGTTTAGCATTCTCTACTCTGCCTCTCTGCGGAAATTGAAAGAATaGCACAAGGTTGCCTGTACA +
Preference number: 4 (lower is better)
Translates to: KWLEETWGQFSILYSASLRKLKE*HKVACT
Trigger: TGTACAGGCAACCTTGTGTCATTCTTTCAATTTCCG...CAGAGAGGCAGAGTAGAGAATGCTAAACTGGCCCCATGTCTCCTCCAGCCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp ATGGTGGCAAGGCCTGACTGGTGGCTTTGGTCTAAGACATATGGATCCCTCCTCGACTCAACTATTTCTTaGAAAGGAAAGAGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: MVARPDWWLWSKTYGSLLDSTIS*KGKRPG
Trigger: TCCAGGCCTCTTTCCTTTTCAAGAAATAGTTGAGTC...GAGGAGGGATCCATATGTCTTAGACCAAAGCCACCAGTCAGGCCTTGCCACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp ACCTACTACTCTGACATCAGAGTGCTGGGAGGCCTTGTTCTCTCCCTCTGTCCCAAAGGGGAAGAGATATaGTACATCATTCCATCTCAC +
Preference number: 4 (lower is better)
Translates to: TYYSDIRVLGGLVLSLCPKGEEI*YIIPSH
Trigger: GTGAGATGGAATGATGTATCATATCTCTTCCCCTTT...GGGACAGAGGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp CATGCCACAAAGTCTTCCACTTGGCATTTTCGAGAAGAACCCATCAGAGATCATTTTGGTAATCCACCCTaGCGGGGCCAGATAGGATCC +
Preference number: 4 (lower is better)
Translates to: HATKSSTWHFREEPIRDHFGNPP*RGQIGS
Trigger: GGATCCTATCTGGCCCCGTCAGGGTGGATTACCAAA...ATGATCTCTGATGGGTTCTTCTCGAAAATGCCAAGTGGAAGACTTTGTGGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp CCTGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAACAGAAAGTTGAAACCTaGAAATCAGCAGATACAGGG +
Preference number: 4 (lower is better)
Translates to: PVHKPSTPGPKAFIKSHQQKVET*KSADTG
Trigger: CCCTGTATCTGCTGATTTTCAGGTTTCAACTTTCTG...TTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp TGCTCTTCCTGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCAAGGTGAGCCCCCAATaGTCTACTAGAGAAAGACTA +
Preference number: 4 (lower is better)
Translates to: CSSCAQAQHSRSQGIYQIKVSPQ*STRERL
Trigger: TAGTCTTTCTCTAGTAGATCATTGGGGGCTCACCTT...GATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGGAAGAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp TGTTCTCTTCCCTCATCTGGATCAGTAACTAGTTGGTTGGTCTTCAGCTGTGCTGACAGGAGGAAGTATTaGCGTGGACCTGGTCCTTTC +
Preference number: 4 (lower is better)
Translates to: CSLPSSGSVTSWLVFSCADRRKY*RGPGPF
Trigger: GAAAGGACCAGGTCCACGGCAATACTTCCTCCTGTC...AGCACAGCTGAAGACCAACCAACTAGTTACTGATCCAGATGAGGGAAGAGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp AAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGAATTCTGGGTGTGGATTGCTCACGCTaGCCCACTTCACAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: KAFIKSHQDVWLLHRILGVDCSR*PTSQQE
Trigger: CTCCTGCTGTGAAGTGGGGCAGCGTGAGCAATCCAC...ACCCAGAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR GCA 90 bp AGCATGCCACAAAGTCTTCCACTTGGCATTTTCGAGAAGAACCCATCAGAGATCAGAGTGGGTCTTGCCTaGCTGACTTTCCTCTGCCAA +
Preference number: 4 (lower is better)
Translates to: SMPQSLPLGIFEKNPSEIRVGLA*LTFLCQ
Trigger: TTGGCAGAGGAAAGTCAGGCAGGCAAGACCCACTCT...GATCTCTGATGGGTTCTTCTCGAAAATGCCAAGTGGAAGACTTTGTGGCATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp AGGTGCTTGGATATTCATTCTAGGTTCTTGTTCTTGAGAAAGTGGGTTAGGTGGGGGGCTACAGGTGCCTaGCACTATGCCCGGCTAATT +
Preference number: 4 (lower is better)
Translates to: RCLDIHSRFLFLRKWVRWGATGA*HYARLI
Trigger: AATTAGCCGGGCATAGTGGCAGGCACCTGTAGCCCC...CCACCTAACCCACTTTCTCAAGAACAAGAACCTAGAATGAATATCCAAGCACCT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp GCAGCTCAGAAATACACGAACAATAAAGTGGAGTCCCTAGCCCACTCTGAATCCGGCTGTGTTATAATCTaGGGGACCTCCAGGCAACAT +
Preference number: 4 (lower is better)
Translates to: AAQKYTNNKVESLAHSESGCVII*GTSRQH
Trigger: ATGTTGCCTGGAGGTCCCCCAGATTATAACACAGCC...GGATTCAGAGTGGGCTAGGGACTCCACTTTATTGTTCGTGTATTTCTGAGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp CGCTTCTCTTCTCCAGCAGTCTTCCTGTCCGTGAAGTTTCCTTCCAGATTGTTATCCCCAGACCTCAAATaGGCTAACACGCTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: RFSSPAVFLSVKFPSRLLSPDLK*ANTLLF
Trigger: GAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGGGGA...TAACAATCTGGAAGGAAACTTCACGGACAGGAAGACTGCTGGAGAAGAGAAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CCA 90 bp TGTTCTCTTCCCTCATCTGGATCAGTAACTAGTTGGTTGGTCTTCAGCTGTGCTGTGCTTGTCAGCCTCTaGTACCTGGGTGACAACAGA +
Preference number: 4 (lower is better)
Translates to: CSLPSSGSVTSWLVFSCAVLVSL*YLGDNR
Trigger: TCTGTTGTCACCCAGGTACCAGAGGCTGACAAGCAC...AGCACAGCTGAAGACCAACCAACTAGTTACTGATCCAGATGAGGGAAGAGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp CCCAGACATGGGCAGAAGACTGTTGTCAGGCCAAAGACGGAGTTAAATATATCACAGGCTCATGATGGGTaGCTGATGGGAAGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: PRHGQKTVVRPKTELNISQAHDG*LMGSLQ
Trigger: TTGGAGACTTCCCATCAGCCACCCATCATGAGCCTG...TGATATATTTAACTCCGTCTTTGGCCTGACAACAGTCTTCTGCCCATGTCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp GATTCCCCAGACCTCAAATGGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCCTAAGCTGCTGCCAATATaGTTAACACTCCTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: DSPDLKWANTLLFSSSLPKLLPI*LTLLPE
Trigger: TTCTGGCAGGAGTGTTAACCATATTGGCAGCAGCTT...AGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGGGGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR CAA 72 bp CCAGCAGTCTTCCTGTCCGTGAAGTTTCCTTCCAGATaGTTACATGGAACTGAAAACAAAGGGAGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: PAVFLSVKFPSR*LHGTENKGSLS
Trigger: GCTGAGGCTCCCTTTGTTTTCAGTTCCATGTAACAATCTGGAAGGAAACTTCACGGACAGGAAGACTGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
CDS-3UTR TCA 90 bp TGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATTTTGTTCTTTGGGTTaGAGCCACAGCGATAGACAT +
Preference number: 4 (lower is better)
Translates to: CAQAQHSRSQGIYQIPPRFCSLG*SHSDRH
Trigger: ATGTCTATCGCTGTGGCTTCAACCCAAAGAACAAAA...TCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp GTCAACCTTCCACCCTTAACCTACTACTCTGACATCAGAGTGCTGGGAGGCCTTTTTTGTTCTTTGGGTTaGAGCCACAGCGATAGACAT +
Preference number: 4 (lower is better)
Translates to: VNLPPLTYYSDIRVLGGLFCSLG*SHSDRH
Trigger: ATGTCTATCGCTGTGGCTTCAACCCAAAGAACAAAA...AAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAGGGTGGAAGGTTGAC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp GTGCTTGTCAGCCTCTGGTACCTGGGTGACAACAGAAATATTTTTCCTGGCTTTGTAGTAGTCACTGTCTaGGATGGCCATGAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: VLVSLWYLGDNRNIFPGFVVVTV*DGHEQF
Trigger: GAACTGCTCATGGCCATCTCAGACAGTGACTACTAC...AAAGCCAGGAAAAATATTTCTGTTGTCACCCAGGTACCAGAGGCTGACAAGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp CATGCCACAAAGTCTTCCACTTGGCATTTTCGAGAAGAACCCATCAGAGATCATCTTGTGCTGTCTCCTTaGTGCGCAGTGTGTTCTGGT +
Preference number: 4 (lower is better)
Translates to: HATKSSTWHFREEPIRDHLVLSP*CAVCSG
Trigger: ACCAGAACACACTGCGCATCAAGGAGACAGCACAAG...ATGATCTCTGATGGGTTCTTCTCGAAAATGCCAAGTGGAAGACTTTGTGGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp CACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCATATAGACAGGAATGCTaGCATCGTAGCCTTGCCGGT +
Preference number: 4 (lower is better)
Translates to: HSRSQGIYQIPPRCLAFAYRQEC*HRSLAG
Trigger: ACCGGCAAGGCTACGATGTCAGCATTCCTGTCTATA...TGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp GTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGAATTCGGATGGAGACCCACCTaGGATGACAGGAGGAAGTAT +
Preference number: 4 (lower is better)
Translates to: VPRHLSNPTKMFGFCTEFGWRPT*DDRRKY
Trigger: ATACTTCCTCCTGTCATCTCAGGTGGGTCTCCATCC...GAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp TCAAATGGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCCTGTCCGTGAAGTTTGGCAATGGCTTTAATTaGCTGGAAGTACGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: SNGLTRFSSPAVFLSVKFGNGFN*LEVRFP
Trigger: TGGGAAGCGTACTTCCAGTCAATTAAAGCCATTGCC...AAACTTCACGGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp TCAAATGGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCCTGTCCGTGAAGTTTCTGAAGCAAACTTGTTaGTGCACTCTGACCTCTCCA +
Preference number: 4 (lower is better)
Translates to: SNGLTRFSSPAVFLSVKFLKQTC*CTLTSP
Trigger: TGGAGAGGTCAGAGTGCATCAACAAGTTTGCTTCAG...AAACTTCACGGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp CACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACTTAACCTACTACTCTaGCATCAGAGTGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: HSRSQGIYQIPPRCLAFALNLLL*HQSAGR
Trigger: CCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAG...TGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp AGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGGGACCTTCTTACGCTTaGTGCAGAGGGTATCAGACA +
Preference number: 4 (lower is better)
Translates to: STPGPKAFIKSHQDVWLLGPSYA*CRGYQT
Trigger: TGTCTGATACCCTCTGCATCAAGCGTAAGAAGGTCC...CAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp TTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGAATTCTGGGTTTGGTTCTGGGCCATCGCTTGTaGTGTCTCCTTGATGCGCAG +
Preference number: 4 (lower is better)
Translates to: FIKSHQDVWLLHRILGLVLGHRL*CLLDAQ
Trigger: CTGCGCATCAAGGAGACAGCACAAGCGATGGCCCAG...AACCAAACCCAGAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR GCA 90 bp GGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGAATTCTGGGTTTGGAGGAAGAGTGGATTaGTCACGCTGCCCCACTTCA +
Preference number: 4 (lower is better)
Translates to: GIYQIPPRCLAFAPNSGFGGRVD*SRCPTS
Trigger: TGAAGTGGGGCAGCGTGAGCAATCCACTCTTCCTCC...AAACCCAGAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR GCA 90 bp CGCTTCTCTTCTCCAGCAGTCTTCCTGTCCGTGAAGTTTCCTTCCAGATTGTTACTTGTGATAAAAAGCTaGCCCAGTGAGCACCATGGA +
Preference number: 4 (lower is better)
Translates to: RFSSPAVFLSVKFPSRLLLVIKS*PSEHHG
Trigger: TCCATGGTGCTCACTGGGGCAGCTTTTTATCACAAG...TAACAATCTGGAAGGAAACTTCACGGACAGGAAGACTGCTGGAGAAGAGAAGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR GCA 90 bp CCCTTAACCTACTACTCTGACATCAGAGTGCTGGGAGGCCTTGTTCTCTCCCTCTTTAAATCTGGAGCATaGCACAAAGTCTTCCACTTG +
Preference number: 4 (lower is better)
Translates to: PLTYYSDIRVLGGLVLSLFKSGA*HKVFHL
Trigger: CAAGTGGAAGACTTTGTGGCATGCTCCAGATTTAAA...GAGGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR GCA 90 bp CCCAGACATGGGCAGAAGACTGTTGTCAGGCCAAAGACGGAGTTAAATATATCACACTGTGGCTTCTCTTaGTGCAATGGAAGAGTACCC +
Preference number: 4 (lower is better)
Translates to: PRHGQKTVVRPKTELNISHCGFS*CNGRVP
Trigger: GGGTACTCTTCCATTGCAGCAAGAGAAGCCACAGTG...TGATATATTTAACTCCGTCTTTGGCCTGACAACAGTCTTCTGCCCATGTCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp TTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGAATTCTGGGTTTGGTTCCCACAGGTTTCATATaGCTCCAGGCCCTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: FIKSHQDVWLLHRILGLVPTGFI*LQALQW
Trigger: CCACTGCAGGGCCTGGAGGCATATGAAACCTGTGGG...AACCAAACCCAGAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp AAGGAAGCTAGGATCACAGGGTTATTAGCAACATCTTTGGCCAATGAGAGCAAACGTGACCTCATGATCTaGCCGCTTTGGCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: KEARITGLLATSLANESKRDLMI*PLWPPK
Trigger: TTTGGGAGGCCAAAGCGGGCAGATCATGAGGTCACG...TTTGCTCTCATTGGCCAAAGATGTTGCTAATAACCCTGTGATCCTAGCTTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp TCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGTTGGGCCTACCACACTaGCTGGCAAAGACAACATTT +
Preference number: 4 (lower is better)
Translates to: SRSQGIYQIPPRCLAFAPLGLPH*LAKTTF
Trigger: AAATGTTGTCTTTGCCAGGCAGTGTGGTAGGCCCAA...CGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp CCAGACCTCAAATGGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCCTGTCCGTCATTGTTTTGTTCAGTaGCATATCCTCACACCAAGA +
Preference number: 4 (lower is better)
Translates to: PDLKWANTLLFSSSLPVRHCFVQ*HILTPR
Trigger: TCTTGGTGTGAGGATATGGCACTGAACAAAACAATG...ACGGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp AGGTGCTTGGATATTCATTCTAGGTTCTTGTTCTTGAGAAAGTGGGTTAGGTGGGAACCCTTGAGACTGTaGTGGGATCAGCGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: RCLDIHSRFLFLRKWVRWEPLRL*WDQREE
Trigger: TTCCTCCCGCTGATCCCACCACAGTCTCAAGGGTTC...CCACCTAACCCACTTTCTCAAGAACAAGAACCTAGAATGAATATCCAAGCACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CCA 90 bp CCCTTAACCTACTACTCTGACATCAGAGTGCTGGGAGGCCTTGTTCTCTCCCTCCTTGAATTTCTTTCGTaGGGTTACCTTGATAACTGC +
Preference number: 4 (lower is better)
Translates to: PLTYYSDIRVLGGLVLSLLEFLS*GYLDNC
Trigger: GCAGTTATCAAGGTAACCCCACGAAAGAAATTCAAG...GAGGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CCA 90 bp ACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTAGAAAGTGGGTTAGGTaGGTGCATGCCAAGATCCAA +
Preference number: 4 (lower is better)
Translates to: TSPALQVPRHLSNPTKMFRKWVR*VHAKIQ
Trigger: TTGGATCTTGGCATGCACCCACCTAACCCACTTTCT...AAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CCA 90 bp CCTGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAATAGCTCGAGGTGCTTaGATATTCATTCTAGGTTCT +
Preference number: 4 (lower is better)
Translates to: PVHKPSTPGPKAFIKSHQIARGA*IFILGS
Trigger: AGAACCTAGAATGAATATCCAAGCACCTCGAGCTAT...TTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CCA 90 bp CATTTAACGTTAGCCAGAACCTCCCTGGCTAATGTTAAGTTTATACCAAAAGAATCCCAGTTAGGCCCCTaGGGGCAAAGCCAGTGGCTC +
Preference number: 4 (lower is better)
Translates to: HLTLARTSLANVKFIPKESQLGP*GQSQWL
Trigger: GAGCCACTGGCTTTGCCCCCAGGGGCCTAACTGGGA...TTCTTTTGGTATAAACTTAACATTAGCCAGGGAGGTTCTGGCTAACGTTAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp GCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCGCAAGGCCTGACTGGTaGCTTTGGTCTAAGACATAT +
Preference number: 4 (lower is better)
Translates to: ALQVPRHLSNPTKMFGFCARPDW*LWSKTY
Trigger: ATATGTCTTAGACCAAAGCCACCAGTCAGGCCTTGC...GCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp CTAGAGCGACTCCTTGCATGGCTAGTACAGACCCTCTGTTTTTCTCTGACAATAACATGCTTAGAGTCCTaGGCCACTGATGGACTCACA +
Preference number: 4 (lower is better)
Translates to: LERLLAWLVQTLCFSLTITCLES*ATDGLT
Trigger: TGTGAGTCCATCAGTGGCCCAGGACTCTAAGCATGT...TATTGTCAGAGAAAAACAGAGGGTCTGTACTAGCCATGCAAGGAGTCGCTCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp GGATTTAAATCTGGAGCATGCCACAAAGTCTTCCACTTGGCATTTTCGAGAAGAGGGCCAGGGTACAACTaGCAACTGGAAGGTGCTATG +
Preference number: 4 (lower is better)
Translates to: GFKSGACHKVFHLAFSRRGPGYN*QLEGAM
Trigger: CATAGCACCTTCCAGTTGCCAGTTGTACCCTGGCCC...TCTTCTCGAAAATGCCAAGTGGAAGACTTTGTGGCATGCTCCAGATTTAAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp AAGGAAGCTAGGATCACAGGGTTATTAGCAACATCTTTGGCCAATGAGAGCAAATCTTCATTCTTGGGATaGGGGCAGGACCCCGGATAT +
Preference number: 4 (lower is better)
Translates to: KEARITGLLATSLANESKSSFLG*GQDPGY
Trigger: ATATCCGGGGTCCTGCCCTCATCCCAAGAATGAAGA...TTTGCTCTCATTGGCCAAAGATGTTGCTAATAACCCTGTGATCCTAGCTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp CTTCTCTTCTCCAGCAGTCTTCCTGTCCGTGAAGTTTCCTTCCAGATTGTTACACTCCAGGCAACATGTTaGACAACAGGTGATTCGTAC +
Preference number: 4 (lower is better)
Translates to: LLFSSSLPVREVSFQIVTLQATC*TTGDSY
Trigger: GTACGAATCACCTGTTGTTCAACATGTTGCCTGGAG...TGTAACAATCTGGAAGGAAACTTCACGGACAGGAAGACTGCTGGAGAAGAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp AGGTGCTTGGATATTCATTCTAGGTTCTTGTTCTTGAGAAAGTGGGTTAGGTGGTATAGGAGTCTGCAATaGCAACCGGGACACAGCCAG +
Preference number: 4 (lower is better)
Translates to: RCLDIHSRFLFLRKWVRWYRSLQ*QPGHSQ
Trigger: CTGGCTGTGTCCCGGTTGTCATTGCAGACTCCTATA...CCACCTAACCCACTTTCTCAAGAACAAGAACCTAGAATGAATATCCAAGCACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp TCCTGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAATACTGTACACATCTaGCATCTTTTCTTCTGGTAC +
Preference number: 4 (lower is better)
Translates to: SCAQAQHSRSQGIYQIPPNTVHI*HLFFWY
Trigger: GTACCAGAAGAAAAGATGTCAGATGTGTACAGTATT...TGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp TGCTCTTCCTGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCGGAGGGTTTTTATTCTaGTTATTCCAGACGACAAGT +
Preference number: 4 (lower is better)
Translates to: CSSCAQAQHSRSQGIYQIGGFLF*LFQTTS
Trigger: ACTTGTCGTCTGGAATAATCAGAATAAAAACCCTCC...GATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGGAAGAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp TCAAATGGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCCTGTCCGTGAAGTTTCATCTACCCAGTTCTTaGTATCCCCAGGCATTTTGT +
Preference number: 4 (lower is better)
Translates to: SNGLTRFSSPAVFLSVKFHLPSS*YPQAFC
Trigger: ACAAAATGCCTGGGGATATCAAGAACTGGGTAGATG...AAACTTCACGGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp AGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCTGAAGCAAACTTGTTaGTGCACTCTGACCTCTCCA +
Preference number: 4 (lower is better)
Translates to: STPGPKAFIKSHQDVWLLLKQTC*CTLTSP
Trigger: TGGAGAGGTCAGAGTGCATCAACAAGTTTGCTTCAG...CAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp CTTCTCTTCTCCAGCAGTCTTCCTGTCCGTGAAGTTTCCTTCCAGATTGTTACACTAGGTTCTTGTTCTTaGGAAAGTGGGTTAGGTGGG +
Preference number: 4 (lower is better)
Translates to: LLFSSSLPVREVSFQIVTLGSCS*ESGLGG
Trigger: CCCACCTAACCCACTTTCTCAAGAACAAGAACCTAG...TGTAACAATCTGGAAGGAAACTTCACGGACAGGAAGACTGCTGGAGAAGAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp GTTCCCAGACATGGGCAGAAGACTGTTGTCAGGCCAAAGACGGAGTTAAATATAAATGAACAAACTGGATaGGATGATCGCTTGCCCCCT +
Preference number: 4 (lower is better)
Translates to: VPRHGQKTVVRPKTELNINEQTG*DDRLPP
Trigger: AGGGGGCAAGCGATCATCTCATCCAGTTTGTTCATT...TATATTTAACTCCGTCTTTGGCCTGACAACAGTCTTCTGCCCATGTCTGGGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp TCAAATGGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCCTGTCCGTGAAGTTTCCTCTGGTACCTGGGTaGCAACAGAAATATTTTTCC +
Preference number: 4 (lower is better)
Translates to: SNGLTRFSSPAVFLSVKFPLVPG*QQKYFS
Trigger: GGAAAAATATTTCTGTTGTCACCCAGGTACCAGAGG...AAACTTCACGGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp AGCTCGAGGTGCTTGGATATTCATTCTAGGTTCTTGTTCTTGAGAAAGTGGGTTGTCCCTAGCCCACTCTaGATCCATGAATCGCCATCA +
Preference number: 4 (lower is better)
Translates to: SSRCLDIHSRFLFLRKWVVPSPL*IHESPS
Trigger: TGATGGCGATTCATGGATTCAGAGTGGGCTAGGGAC...AACCCACTTTCTCAAGAACAAGAACCTAGAATGAATATCCAAGCACCTCGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp TCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGCAGCACAGACCAGCATaGTGGTCACTATTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: SRSQGIYQIPPRCLAFAPQHRPA*WSLFSK
Trigger: TTTGGAAAATAGTGACCATCATGCTGGTCTGTGCTG...CGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp CTAGAGCGACTCCTTGCATGGCTAGTACAGACCCTCTGTTTTTCTCTGACAATAAACATCTTTGGCCAATaGGAGCAAAGAGGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: LERLLAWLVQTLCFSLTINIFGQ*EQRGSL
Trigger: CAAGCTCCCTCTTTGCTCTCATTGGCCAAAGATGTT...TATTGTCAGAGAAAAACAGAGGGTCTGTACTAGCCATGCAAGGAGTCGCTCTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp GGGTATCAGACATTCCTCCTGGCGTGTGTTCCCAGACATGGGCAGAAGACTGTTGCTTCATCTACTTTCTaGTTACTATCTTGGCTGAAA +
Preference number: 4 (lower is better)
Translates to: GYQTFLLACVPRHGQKTVASSTF*LLSWLK
Trigger: TTTCAGCCAAGATAGTAATCAGAAAGTAGATGAAGC...AACAGTCTTCTGCCCATGTCTGGGAACACACGCCAGGAGGAATGTCTGATACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp CGCTTCTCTTCTCCAGCAGTCTTCCTGTCCGTGAAGTTTCCTTCCAGATTGTTAAGTGGTCCAACCAACTaGGAGCAGAAGAAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: RFSSPAVFLSVKFPSRLLSGPTN*EQKKGK
Trigger: TTTTCCTTTCTTCTGCTCTCAGTTGGTTGGACCACT...TAACAATCTGGAAGGAAACTTCACGGACAGGAAGACTGCTGGAGAAGAGAAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp TTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGAATTCTGGGTTTGGTTCCGGTCATTGATAATCTaGAGGGTGGCCAGGGCAATG +
Preference number: 4 (lower is better)
Translates to: LSNPTKMFGFCTEFWVWFRSLII*RVARAM
Trigger: CATTGCCCTGGCCACCCTGCAGATTATCAATGACCG...GAACCAAACCCAGAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp TCCTGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAATGAAGAGCTGTCTCTaGATTTCTTCAATCTGTCTT +
Preference number: 4 (lower is better)
Translates to: SCAQAQHSRSQGIYQIPPMKSCL*ISSICL
Trigger: AAGACAGATTGAAGAAATGCAGAGACAGCTCTTCAT...TGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358681.8
CDS-3UTR GCA 90 bp ATGATTCCCCAGACCTCAAATGGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCGTAAGCACCTGTGTTTaGTGCTGTCAGAAACTGAAA +
Preference number: 4 (lower is better)
Translates to: MIPQTSNGLTRFSSPAVFVSTCV*CCQKLK
Trigger: TTTCAGTTTCTGACAGCAGCAAACACAGGTGCTTAC...GAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGGGGAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp GCAGCTCAGAAATACACGAACAATAAAGTGGAGTCCCTAGCCCACTCTGAATCCCTTATGGGTGAGGTTTaGTGGTTAGCAGCTCAGAAA +
Preference number: 4 (lower is better)
Translates to: AAQKYTNNKVESLAHSESLMGEV*WLAAQK
Trigger: TTTCTGAGCTGCTAACCAGCAAACCTCACCCATAAG...GGATTCAGAGTGGGCTAGGGACTCCACTTTATTGTTCGTGTATTTCTGAGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp GTGCTTGTCAGCCTCTGGTACCTGGGTGACAACAGAAATATTTTTCCTGGCTTTAGAATGACACAAGGTTaGCTGTACAGACCCACACAC +
Preference number: 4 (lower is better)
Translates to: VLVSLWYLGDNRNIFPGFRMTQG*LYRPTH
Trigger: GTGTGTGGGTCTGTACAGGCAACCTTGTGTCATTCT...AAAGCCAGGAAAAATATTTCTGTTGTCACCCAGGTACCAGAGGCTGACAAGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp GTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGAATTCGGCTGTGTTATAATCTaGGGGACCTCCAGGCAACAT +
Preference number: 4 (lower is better)
Translates to: VPRHLSNPTKMFGFCTEFGCVII*GTSRQH
Trigger: ATGTTGCCTGGAGGTCCCCCAGATTATAACACAGCC...GAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CCA 90 bp TCAAATGGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCCTGTCCGTGAAGTTTCACCCTCTGAGAGGTTaGTGCATTTATCGAGTACTA +
Preference number: 4 (lower is better)
Translates to: SNGLTRFSSPAVFLSVKFHPLRG*CIYRVL
Trigger: TAGTACTCGATAAATGCACCAACCTCTCAGAGGGTG...AAACTTCACGGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CCA 90 bp TTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGAATTCTGGGTTTGGTTCAAGACCTGGTGCTTGTaGCAGCGCTTACGGACAGAA +
Preference number: 4 (lower is better)
Translates to: LSNPTKMFGFCTEFWVWFKTWCL*QRLRTE
Trigger: TTCTGTCCGTAAGCGCTGCCACAAGCACCAGGTCTT...GAACCAAACCCAGAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CCA 90 bp GTGCTTGTCAGCCTCTGGTACCTGGGTGACAACAGAAATATTTTTCCTGGCTTTAGACGACAAGTAGTTTaGATAGACTGGGCACCTTGG +
Preference number: 4 (lower is better)
Translates to: VLVSLWYLGDNRNIFPGFRRQVV*IDWAPW
Trigger: CCAAGGTGCCCAGTCTATCCAAACTACTTGTCGTCT...AAAGCCAGGAAAAATATTTCTGTTGTCACCCAGGTACCAGAGGCTGACAAGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp GAGCCTCAGCTGGATTTAAATCTGGAGCATGCCACAAAGTCTTCCACTTGGCATATAAGCTGCCAATGTTaGGGAAGCTCTTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: EPQLDLNLEHATKSSTWHISCQC*GSSSAS
Trigger: AGAAGCTGAAGAGCTTCCCCAACATTGGCAGCTTAT...ATGCCAAGTGGAAGACTTTGTGGCATGCTCCAGATTTAAATCCAGCTGAGGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CCA 90 bp AGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGTTGTTCTTGAGAAAGTaGGTTAGGTGGGTGCATGCC +
Preference number: 4 (lower is better)
Translates to: STPGPKAFIKSHQDVWLLLFLRK*VRWVHA
Trigger: GGCATGCACCCACCTAACCCACTTTCTCAAGAACAA...CAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CCA 90 bp GGATTTAAATCTGGAGCATGCCACAAAGTCTTCCACTTGGCATTTTCGAGAAGAAGTTTCCTCCTGGCATaGTGCCTGTCAGAGGCTATC +
Preference number: 4 (lower is better)
Translates to: GFKSGACHKVFHLAFSRRSFLLA*CLSEAI
Trigger: GATAGCCTCTGACAGGCACCATGCCAGGAGGAAACT...TCTTCTCGAAAATGCCAAGTGGAAGACTTTGTGGCATGCTCCAGATTTAAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp GTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGAATTCCTTCTCTTGCTGCAATaGAAGAGTACCCGAGCCAAG +
Preference number: 4 (lower is better)
Translates to: VPRHLSNPTKMFGFCTEFLLLLQ*KSTRAK
Trigger: CTTGGCTCGGGTACTCTTCCATTGCAGCAAGAGAAG...GAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp CACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACAAAGTCTCTCTGGATaGAAGCTGCTGCCAATATGG +
Preference number: 4 (lower is better)
Translates to: HSRSQGIYQIPPRCLAFAQSLSG*KLLPIW
Trigger: CCATATTGGCAGCAGCTTCCATCCAGAGAGACTTTG...TGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp ACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTCTTTCAAAGTCTCTCTaGATGGAAGCTGCTGCCAAT +
Preference number: 4 (lower is better)
Translates to: TSPALQVPRHLSNPTKMFLSKSL*MEAAAN
Trigger: ATTGGCAGCAGCTTCCATCCAGAGAGACTTTGAAAG...AAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp GTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGAATTCGTGGAAAAGAGGCTGTaGCTTGAGCTTACAATGCCC +
Preference number: 4 (lower is better)
Translates to: VPRHLSNPTKMFGFCTEFVEKRL*LELTMP
Trigger: GGGCATTGTAAGCTCAAGCCACAGCCTCTTTTCCAC...GAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp CAACTGTTGCAAAGCAGTTGTATAGCAGCATTTAACGTTAGCCAGAACCTCCCTAAGATCAGCCAGGTGTaGTGGTGCACGCTTTTAGTC +
Preference number: 4 (lower is better)
Translates to: QLLQSSCIAAFNVSQNLPKISQV*WCTLLV
Trigger: GACTAAAAGCGTGCACCACCACACCTGGCTGATCTT...AGGGAGGTTCTGGCTAACGTTAAATGCTGCTATACAACTGCTTTGCAACAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp GTTCCCAGACATGGGCAGAAGACTGTTGTCAGGCCAAAGACGGAGTTAAATATAAAGAGATGCAACCAGTaGTCCAACCAACTGAGAGCA +
Preference number: 4 (lower is better)
Translates to: VPRHGQKTVVRPKTELNIKRCNQ*SNQLRA
Trigger: TGCTCTCAGTTGGTTGGACCACTGGTTGCATCTCTT...TATATTTAACTCCGTCTTTGGCCTGACAACAGTCTTCTGCCCATGTCTGGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp CACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCTGACTGGTGGCTTTaGTCTAAGACATATGGATCC +
Preference number: 4 (lower is better)
Translates to: HSRSQGIYQIPPRCLAFAPDWWL*SKTYGS
Trigger: GGATCCATATGTCTTAGACCAAAGCCACCAGTCAGG...TGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR CAA 72 bp AGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTaGGCTTTTGCACCGAATTCTGGGTTTGGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: RSQGIYQIPPRC*AFAPNSGFGSL
Trigger: CAGGGAACCAAACCCAGAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
CDS-3UTR TCA 90 bp GTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGAATTCATGTTGAACAACAGGTaGTTCGTACCTCGATCCCAC +
Preference number: 4 (lower is better)
Translates to: VPRHLSNPTKMFGFCTEFMLNNR*FVPRSH
Trigger: GTGGGATCGAGGTACGAATCACCTGTTGTTCAACAT...GAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp TTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGAATTCTGGGTTTGGTTCAAGATCCACCTCAGCTaGCAGTGGACTATAGACAGG +
Preference number: 4 (lower is better)
Translates to: LSNPTKMFGFCTEFWVWFKIHLS*QWTIDR
Trigger: CCTGTCTATAGTCCACTGTCAGCTGAGGTGGATCTT...GAACCAAACCCAGAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp CATGCCACAAAGTCTTCCACTTGGCATTTTCGAGAAGAACCCATCAGAGATCATAGAAAGGACACCCTCTaGGAGGTTGGTGCATTTATC +
Preference number: 4 (lower is better)
Translates to: HATKSSTWHFREEPIRDHRKDTL*EVGAFI
Trigger: GATAAATGCACCAACCTCTCAGAGGGTGTCCTTTCT...ATGATCTCTGATGGGTTCTTCTCGAAAATGCCAAGTGGAAGACTTTGTGGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp CTTCTCTTCTCCAGCAGTCTTCCTGTCCGTGAAGTTTCCTTCCAGATTGTTACATGCACTCAGGACACTTaGATTTCTTTCGTGGGGTTA +
Preference number: 4 (lower is better)
Translates to: LLFSSSLPVREVSFQIVTCTQDT*ISFVGL
Trigger: TAACCCCACGAAAGAAATTCAAGTGTCCTGAGTGCA...TGTAACAATCTGGAAGGAAACTTCACGGACAGGAAGACTGCTGGAGAAGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp CATGCCACAAAGTCTTCCACTTGGCATTTTCGAGAAGAACCCATCAGAGATCATTCCCATGTCTCCTACTaGCCAGTACACATTACCCAA +
Preference number: 4 (lower is better)
Translates to: HATKSSTWHFREEPIRDHSHVSY*PVHITQ
Trigger: TTGGGTAATGTGTACTGGTCAGTAGGAGACATGGGA...ATGATCTCTGATGGGTTCTTCTCGAAAATGCCAAGTGGAAGACTTTGTGGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp CATTTAACGTTAGCCAGAACCTCCCTGGCTAATGTTAAGTTTATACCAAAAGAAGGCAGGAGAATCACTTaGACCTGGGAGGCGGAGGAT +
Preference number: 4 (lower is better)
Translates to: HLTLARTSLANVKFIPKEGRRIT*TWEAED
Trigger: ATCCTCCGCCTCCCAGGTTCAAGTGATTCTCCTGCC...TTCTTTTGGTATAAACTTAACATTAGCCAGGGAGGTTCTGGCTAACGTTAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp AGGTGCTTGGATATTCATTCTAGGTTCTTGTTCTTGAGAAAGTGGGTTAGGTGGAGAGTCCTGGGCCACTaGTGGACTCACATCATCTTA +
Preference number: 4 (lower is better)
Translates to: RCLDIHSRFLFLRKWVRWRVLGH*WTHIIL
Trigger: TAAGATGATGTGAGTCCATCAGTGGCCCAGGACTCT...CCACCTAACCCACTTTCTCAAGAACAAGAACCTAGAATGAATATCCAAGCACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp TCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGGGATATTCATCATTATaGCTTCCAAAGAAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: SRSQGIYQIPPRCLAFAPGYSSL*LPKKGQ
Trigger: CTGGCCCTTCTTTGGAAGTCATAATGATGAATATCC...CGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp AGGTGCTTGGATATTCATTCTAGGTTCTTGTTCTTGAGAAAGTGGGTTAGGTGGGCACATCACGGATGCTaGGCTTCTCTACATTCCAGT +
Preference number: 4 (lower is better)
Translates to: RCLDIHSRFLFLRKWVRWAHHGC*ASLHSS
Trigger: ACTGGAATGTAGAGAAGCGCAGCATCCGTGATGTGC...CCACCTAACCCACTTTCTCAAGAACAAGAACCTAGAATGAATATCCAAGCACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR GCA 90 bp TCAAATGGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCCTGTCCGTGAAGTTTCCTCTGAGAGGTTGGTaGATTTATCGAGTACTAACA +
Preference number: 4 (lower is better)
Translates to: SNGLTRFSSPAVFLSVKFPLRGW*IYRVLT
Trigger: TGTTAGTACTCGATAAATGCACCAACCTCTCAGAGG...AAACTTCACGGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR GCA 90 bp TCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGCAAAATATAGGAGTCTaGAATGACAACCGGGACACA +
Preference number: 4 (lower is better)
Translates to: SRSQGIYQIPPRCLAFAPQNIGV*NDNRDT
Trigger: TGTGTCCCGGTTGTCATTGCAGACTCCTATATTTTG...CGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR GCA 90 bp GCAGCTCAGAAATACACGAACAATAAAGTGGAGTCCCTAGCCCACTCTGAATCCCAAAATATAGGAGTCTaGAATGACAACCGGGACACA +
Preference number: 4 (lower is better)
Translates to: AAQKYTNNKVESLAHSESQNIGV*NDNRDT
Trigger: TGTGTCCCGGTTGTCATTGCAGACTCCTATATTTTG...GGATTCAGAGTGGGCTAGGGACTCCACTTTATTGTTCGTGTATTTCTGAGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp AGCTCGAGGTGCTTGGATATTCATTCTAGGTTCTTGTTCTTGAGAAAGTGGGTTACCCTCCCCTATACCTaGCCCACATCTTGGAAAACA +
Preference number: 4 (lower is better)
Translates to: SSRCLDIHSRFLFLRKWVTLPYT*PTSWKT
Trigger: TGTTTTCCAAGATGTGGGGCAGGTATAGGGGAGGGT...AACCCACTTTCTCAAGAACAAGAACCTAGAATGAATATCCAAGCACCTCGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp CAAGGGAGAAAGGTGGTTCCTTGGACTATCAGGAATTGGTGTTTAAGACACAGTCTCACAGGATCTAACTaGAGAGCTAGGAAGAGCCTT +
Preference number: 4 (lower is better)
Translates to: QGRKVVPWTIRNWCLRHSLTGSN*RARKSL
Trigger: AAGGCTCTTCCTAGCTCTGCAGTTAGATCCTGTGAG...ACTGTGTCTTAAACACCAATTCCTGATAGTCCAAGGAACCACCTTTCTCCCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp CTAGAGCGACTCCTTGCATGGCTAGTACAGACCCTCTGTTTTTCTCTGACAATAGTTGGTCTTCAGCTGTaGTCACCAGAAAACCAAATG +
Preference number: 4 (lower is better)
Translates to: LERLLAWLVQTLCFSLTIVGLQL*SPENQM
Trigger: CATTTGGTTTTCTGGTGAGCACAGCTGAAGACCAAC...TATTGTCAGAGAAAAACAGAGGGTCTGTACTAGCCATGCAAGGAGTCGCTCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp GTGCTTGTCAGCCTCTGGTACCTGGGTGACAACAGAAATATTTTTCCTGGCTTTAGGCATAAGTGCTCTTaGTGTCTCCAATTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: VLVSLWYLGDNRNIFPGFRHKCS*CLQFLA
Trigger: AGCCAGAAATTGGAGACAGCAAGAGCACTTATGCCT...AAAGCCAGGAAAAATATTTCTGTTGTCACCCAGGTACCAGAGGCTGACAAGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp AAATGTTCTCTTCCCTCATCTGGATCAGTAACTAGTTGGTTGGTCTTCAGCTGTGTATTGCCGTGGACCTaGTCCTTTCTCTGGAAGATC +
Preference number: 4 (lower is better)
Translates to: KCSLPSSGSVTSWLVFSCVLPWT*SFLWKI
Trigger: GATCTTCCAGAGAAAGGACCAGGTCCACGGCAATAC...ACAGCTGAAGACCAACCAACTAGTTACTGATCCAGATGAGGGAAGAGAACATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp CATGCCACAAAGTCTTCCACTTGGCATTTTCGAGAAGAACCCATCAGAGATCATGTAGTTTGGATAGACTaGGCACCTTGGACACTTCAG +
Preference number: 4 (lower is better)
Translates to: HATKSSTWHFREEPIRDHVVWID*APWTLQ
Trigger: CTGAAGTGTCCAAGGTGCCCAGTCTATCCAAACTAC...ATGATCTCTGATGGGTTCTTCTCGAAAATGCCAAGTGGAAGACTTTGTGGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CCA 90 bp AGCATGCCACAAAGTCTTCCACTTGGCATTTTCGAGAAGAACCCATCAGAGATCCACTTATTCATCTCATaGTCCCAGAGATGCAGACGA +
Preference number: 4 (lower is better)
Translates to: SMPQSLPLGIFEKNPSEIHLFIS*SQRCRR
Trigger: TCGTCTGCATCTCTGGGACCATGAGATGAATAAGTG...GATCTCTGATGGGTTCTTCTCGAAAATGCCAAGTGGAAGACTTTGTGGCATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CCA 90 bp GCAGCTCAGAAATACACGAACAATAAAGTGGAGTCCCTAGCCCACTCTGAATCCACAAAGTCTTCCACTTaGCATTTTCGAGAAGAACCC +
Preference number: 4 (lower is better)
Translates to: AAQKYTNNKVESLAHSESTKSST*HFREEP
Trigger: GGGTTCTTCTCGAAAATGCCAAGTGGAAGACTTTGT...GGATTCAGAGTGGGCTAGGGACTCCACTTTATTGTTCGTGTATTTCTGAGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp GCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGAATTCTGGGTTTaGTTCCCTGAAAGAACTCAT +
Preference number: 4 (lower is better)
Translates to: ALQVPRHLSNPTKMFGFCTEFWV*FPERTH
Trigger: ATGAGTTCTTTCAGGGAACCAAACCCAGAATTCGGT...GCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CCA 90 bp ACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTACCGAATTCTGGGTTTaGTTCCCTGAAAGAACTCAT +
Preference number: 4 (lower is better)
Translates to: TSPALQVPRHLSNPTKMFTEFWV*FPERTH
Trigger: ATGAGTTCTTTCAGGGAACCAAACCCAGAATTCGGT...AAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CCA 90 bp TCAAATGGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCCTGTCCGTGAAGTTTTTTTGCACCGAATTCTaGGTTTGGTTCCCTGAAAGA +
Preference number: 4 (lower is better)
Translates to: SNGLTRFSSPAVFLSVKFFCTEF*VWFPER
Trigger: TCTTTCAGGGAACCAAACCCAGAATTCGGTGCAAAA...AAACTTCACGGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGA
46% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CCA 90 bp AGGTGCTTGGATATTCATTCTAGGTTCTTGTTCTTGAGAAAGTGGGTTAGGTGGATCAGACATTCCTCCTaGCGTGTGTTCCCAGACATG +
Preference number: 4 (lower is better)
Translates to: RCLDIHSRFLFLRKWVRWIRHSS*RVFPDM
Trigger: CATGTCTGGGAACACACGCCAGGAGGAATGTCTGAT...CCACCTAACCCACTTTCTCAAGAACAAGAACCTAGAATGAATATCCAAGCACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp TTCAGTCACTTGTTTTGGTTATCTTCCTCATTAGAATGTAAGCTTGACGAAAGTCTGCTCCTCAGGAAGTaGCTGGAGGAGACATGGGGC +
Preference number: 4 (lower is better)
Translates to: FSHLFWLSSSLECKLDESLLLRK*LEETWG
Trigger: GCCCCATGTCTCCTCCAGCCACTTCCTGAGGAGCAG...ACTTTCGTCAAGCTTACATTCTAATGAGGAAGATAACCAAAACAAGTGACTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp AGCATGCCACAAAGTCTTCCACTTGGCATTTTCGAGAAGAACCCATCAGAGATCCTCAGAAGTAGAAAGTaGGTGAGTACCAAACACAGG +
Preference number: 4 (lower is better)
Translates to: SMPQSLPLGIFEKNPSEILRSRK*VSTKHR
Trigger: CCTGTGTTTGGTACTCACCCACTTTCTACTTCTGAG...GATCTCTGATGGGTTCTTCTCGAAAATGCCAAGTGGAAGACTTTGTGGCATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp GTGCTTGTCAGCCTCTGGTACCTGGGTGACAACAGAAATATTTTTCCTGGCTTTCAGATGATGCATGGCTaGTATAATGGGACCAAATGC +
Preference number: 4 (lower is better)
Translates to: VLVSLWYLGDNRNIFPGFQMMHG*YNGTKC
Trigger: GCATTTGGTCCCATTATACCAGCCATGCATCATCTG...AAAGCCAGGAAAAATATTTCTGTTGTCACCCAGGTACCAGAGGCTGACAAGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp AGTACACATTACCCAAATCAAAAGTATTTGGTAAGCACCTGTGTTTGCTGCTGTAAAAGGAAAGAGGCCTaGAAGCTTGGGAGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: STHYPNQKYLVSTCVCCCKRKEA*KLGRGG
Trigger: GCCCCCTCTCCCAAGCTTCCAGGCCTCTTTCCTTTT...ACAGCAGCAAACACAGGTGCTTACCAAATACTTTTGATTTGGGTAATGTGTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR CAA 72 bp AAGGAAGCTAGGATCACAGGGTTATTAGCAACATCTTaGGCCAATGAGAGCAAAGAGGGAGCTTGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: KEARITGLLATS*ANESKEGACLF
Trigger: GAAGAGACAAGCTCCCTCTTTGCTCTCATTGGCCAAAGATGTTGCTAATAACCCTGTGATCCTAGCTTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp CAAGGGAGAAAGGTGGTTCCTTGGACTATCAGGAATTGGTGTTTAAGACACAGTCAATGGAGAAGAGGGTaGTATAGTAGATTCGGTGCT +
Preference number: 4 (lower is better)
Translates to: QGRKVVPWTIRNWCLRHSQWRRG*YSRFGA
Trigger: AGCACCGAATCTACTATATCACCCTCTTCTCCATTG...ACTGTGTCTTAAACACCAATTCCTGATAGTCCAAGGAACCACCTTTCTCCCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp AGCTCGAGGTGCTTGGATATTCATTCTAGGTTCTTGTTCTTGAGAAAGTGGGTTATGTTGAACAACAGGTaGTTCGTACCTCGATCCCAC +
Preference number: 4 (lower is better)
Translates to: SSRCLDIHSRFLFLRKWVMLNNR*FVPRSH
Trigger: GTGGGATCGAGGTACGAATCACCTGTTGTTCAACAT...AACCCACTTTCTCAAGAACAAGAACCTAGAATGAATATCCAAGCACCTCGAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp CATTTAACGTTAGCCAGAACCTCCCTGGCTAATGTTAAGTTTATACCAAAAGAAGAGACCCACCTGAGATaGCAGGAGGAAGTATTGCCG +
Preference number: 4 (lower is better)
Translates to: HLTLARTSLANVKFIPKEETHLR*QEEVLP
Trigger: CGGCAATACTTCCTCCTGTCATCTCAGGTGGGTCTC...TTCTTTTGGTATAAACTTAACATTAGCCAGGGAGGTTCTGGCTAACGTTAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp AAGGAAGCTAGGATCACAGGGTTATTAGCAACATCTTTGGCCAATGAGAGCAAAAGAAAGGACACCCTCTaGGAGGTTGGTGCATTTATC +
Preference number: 4 (lower is better)
Translates to: KEARITGLLATSLANESKRKDTL*EVGAFI
Trigger: GATAAATGCACCAACCTCTCAGAGGGTGTCCTTTCT...TTTGCTCTCATTGGCCAAAGATGTTGCTAATAACCCTGTGATCCTAGCTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp AGCTCGAGGTGCTTGGATATTCATTCTAGGTTCTTGTTCTTGAGAAAGTGGGTTCAGTCTTCCTGTCCGTaGAGTTTCCTTCCAGATTGT +
Preference number: 4 (lower is better)
Translates to: SSRCLDIHSRFLFLRKWVQSSCP*SFLPDC
Trigger: ACAATCTGGAAGGAAACTTCACGGACAGGAAGACTG...AACCCACTTTCTCAAGAACAAGAACCTAGAATGAATATCCAAGCACCTCGAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp TGTTCTCTTCCCTCATCTGGATCAGTAACTAGTTGGTTGGTCTTCAGCTGTGCTGCTATATCCCTGTCTTaGATTTCTACGGTGACTGTA +
Preference number: 4 (lower is better)
Translates to: CSLPSSGSVTSWLVFSCAAISLS*ISTVTV
Trigger: TACAGTCACCGTAGAAATTCAAGACAGGGATATAGC...AGCACAGCTGAAGACCAACCAACTAGTTACTGATCCAGATGAGGGAAGAGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp ATGATTCCCCAGACCTCAAATGGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCAGATACAGATGCTGGTaGCTCAACTATTTCTTGAAA +
Preference number: 4 (lower is better)
Translates to: MIPQTSNGLTRFSSPAVFRYRCW*LNYFLK
Trigger: TTTCAAGAAATAGTTGAGTCACCAGCATCTGTATCT...GAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGGGGAATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp AGCTCGAGGTGCTTGGATATTCATTCTAGGTTCTTGTTCTTGAGAAAGTGGGTTGCCTATGGGACAGAGTaGGACTCTGTTTCCAAAGAA +
Preference number: 4 (lower is better)
Translates to: SSRCLDIHSRFLFLRKWVAYGTE*DSVSKE
Trigger: TTCTTTGGAAACAGAGTCTCACTCTGTCCCATAGGC...AACCCACTTTCTCAAGAACAAGAACCTAGAATGAATATCCAAGCACCTCGAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp CAACTGTTGCAAAGCAGTTGTATAGCAGCATTTAACGTTAGCCAGAACCTCCCTTGGTACAACCACAGATaGTCTCTTCCAGTCAAGAAC +
Preference number: 4 (lower is better)
Translates to: QLLQSSCIAAFNVSQNLPWYNHR*SLPVKN
Trigger: GTTCTTGACTGGAAGAGAGCATCTGTGGTTGTACCA...AGGGAGGTTCTGGCTAACGTTAAATGCTGCTATACAACTGCTTTGCAACAGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp GGATTTAAATCTGGAGCATGCCACAAAGTCTTCCACTTGGCATTTTCGAGAAGATACAAGAACAGAGGTTaGATAGCTCGAGGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: GFKSGACHKVFHLAFSRRYKNRG*IARGAW
Trigger: CCAAGCACCTCGAGCTATGCAACCTCTGTTCTTGTA...TCTTCTCGAAAATGCCAAGTGGAAGACTTTGTGGCATGCTCCAGATTTAAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR GCA 90 bp TGTTCTCTTCCCTCATCTGGATCAGTAACTAGTTGGTTGGTCTTCAGCTGTGCTCTACAGCATAATAACTaGCCACCTTCATGTCACTCA +
Preference number: 4 (lower is better)
Translates to: CSLPSSGSVTSWLVFSCALQHNN*PPSCHS
Trigger: TGAGTGACATGAAGGTGGGCAGTTATTATGCTGTAG...AGCACAGCTGAAGACCAACCAACTAGTTACTGATCCAGATGAGGGAAGAGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp GTTCTTAAAATGGTTATGATTTGGGACCTTCTTACGCTTGATGCAGAGGGTATCAGACCATGCTATTGTTaGACTCCAGCCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: VLKMVMIWDLLTLDAEGIRPCYC*TPAWVT
Trigger: TGTCACCCAGGCTGGAGTGCAACAATAGCATGGTCT...GATACCCTCTGCATCAAGCGTAAGAAGGTCCCAAATCATAACCATTTTAAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp TGTTCTCTTCCCTCATCTGGATCAGTAACTAGTTGGTTGGTCTTCAGCTGTGCTGTGGAAAGCTCAAGTTaGTTTCAAAGTCTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: CSLPSSGSVTSWLVFSCAVESSS*FQSLSG
Trigger: TCCAGAGAGACTTTGAAAGCAACTTGAGCTTTCCAC...AGCACAGCTGAAGACCAACCAACTAGTTACTGATCCAGATGAGGGAAGAGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp AGGTGCTTGGATATTCATTCTAGGTTCTTGTTCTTGAGAAAGTGGGTTAGGTGGGAAGAAAGGAAAAAGTaGTATCCTGGGCCAGGCATG +
Preference number: 4 (lower is better)
Translates to: RCLDIHSRFLFLRKWVRWEERKK*YPGPGM
Trigger: CATGCCTGGCCCAGGATAGCACTTTTTCCTTTCTTC...CCACCTAACCCACTTTCTCAAGAACAAGAACCTAGAATGAATATCCAAGCACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp CTAGAGCGACTCCTTGCATGGCTAGTACAGACCCTCTGTTTTTCTCTGACAATATCCTATAGGAGGTGCTaGCACCAATGTACAATTTTC +
Preference number: 4 (lower is better)
Translates to: LERLLAWLVQTLCFSLTISYRRC*HQCTIF
Trigger: GAAAATTGTACATTGGTGGCAGCACCTCCTATAGGA...TATTGTCAGAGAAAAACAGAGGGTCTGTACTAGCCATGCAAGGAGTCGCTCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp GGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGAATTCTGGGTTTATGCGCAGTGTGTTCTaGTTAAGCACATCGATGGAG +
Preference number: 4 (lower is better)
Translates to: GIYQIPPRCLAFAPNSGFMRSVF*LSTSME
Trigger: CTCCATCGATGTGCTTAACCAGAACACACTGCGCAT...AAACCCAGAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CCA 90 bp GGATTTAAATCTGGAGCATGCCACAAAGTCTTCCACTTGGCATTTTCGAGAAGAATGGAACCCGGATTTTaGGCCAGAGAGAATCTTCTG +
Preference number: 4 (lower is better)
Translates to: GFKSGACHKVFHLAFSRRMEPGF*ARENLL
Trigger: CAGAAGATTCTCTCTGGCCCAAAATCCGGGTTCCAT...TCTTCTCGAAAATGCCAAGTGGAAGACTTTGTGGCATGCTCCAGATTTAAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CCA 90 bp GCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGAATTCTGGGTTTGAGAAAGTGGGTTAGGTaGGTGCATGCCAAGATCCAA +
Preference number: 4 (lower is better)
Translates to: AFIKSHQDVWLLHRILGLRKWVR*VHAKIQ
Trigger: TTGGATCTTGGCATGCACCCACCTAACCCACTTTCT...CAAACCCAGAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CCA 90 bp CCCAGACATGGGCAGAAGACTGTTGTCAGGCCAAAGACGGAGTTAAATATATCAAGAAAGGTGGTTCCTTaGACTATCAGGAATTGGTGT +
Preference number: 4 (lower is better)
Translates to: PRHGQKTVVRPKTELNISRKVVP*TIRNWC
Trigger: ACACCAATTCCTGATAGTCCAAGGAACCACCTTTCT...TGATATATTTAACTCCGTCTTTGGCCTGACAACAGTCTTCTGCCCATGTCTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp TGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGAATGTATTTTGTGTTTTaGGGACATATGTTGTGGCTA +
Preference number: 4 (lower is better)
Translates to: CAQAQHSRSQGIYQIPPRMYFVF*GHMLWL
Trigger: TAGCCACAACATATGTCCCCAAAACACAAAATACAT...TCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp ATCACTGGCAGGAAAGAACACAAGATTCTGACAACTAAAGTTGCTGTTTTTCTCTGGCTGGAGGAGACATaGGGCCAGTTTAGCATTCTC +
Preference number: 4 (lower is better)
Translates to: ITGRKEHKILTTKVAVFLWLEET*GQFSIL
Trigger: GAGAATGCTAAACTGGCCCCATGTCTCCTCCAGCCA...GAGAAAAACAGCAACTTTAGTTGTCAGAATCTTGTGTTCTTTCCTGCCAGTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp TTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGAATTCTGGGTTTGGTTGGAAATTGGGGAAGCTaGGCATCCCTAACAGTCCAT +
Preference number: 4 (lower is better)
Translates to: FIKSHQDVWLLHRILGLVGNWGS*ASLTVH
Trigger: ATGGACTGTTAGGGATGCCCAGCTTCCCCAATTTCC...AACCAAACCCAGAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp AGGTGGGTGCATGCCAAGATCCAAGTAGGTCAACCTTCCACCCTTAACCTACTAAATGGAACCCTCATTTaGCCAAGTTGTAAGATATCA +
Preference number: 4 (lower is better)
Translates to: RWVHAKIQVGQPSTLNLLNGTLI*PSCKIS
Trigger: TGATATCTTACAACTTGGCCAAATGAGGGTTCCATT...TAGTAGGTTAAGGGTGGAAGGTTGACCTACTTGGATCTTGGCATGCACCCACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR CAA 72 bp TGTTCTCTTCCCTCATCTGGATCAGTAACTAGTTGGTaGGTCTTCAGCTGTGCTCACCAGAAAACCAAATGT +
Preference number: 4 (lower is better)
Translates to: CSLPSSGSVTSW*VFSCAHQKTKC
Trigger: ACATTTGGTTTTCTGGTGAGCACAGCTGAAGACCAACCAACTAGTTACTGATCCAGATGAGGGAAGAGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp TTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGAATTCTGGGTTTGGTTCCAATGGAGAAGAGGGTaGTATAGTAGATTCGGTGCT +
Preference number: 4 (lower is better)
Translates to: LSNPTKMFGFCTEFWVWFQWRRG*YSRFGA
Trigger: AGCACCGAATCTACTATATCACCCTCTTCTCCATTG...GAACCAAACCCAGAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp AGGTGCTTGGATATTCATTCTAGGTTCTTGTTCTTGAGAAAGTGGGTTAGGTGGTACATTCCAGTCATTTaGGGACTCGATAGAATGGGG +
Preference number: 4 (lower is better)
Translates to: RCLDIHSRFLFLRKWVRWYIPVI*GLDRMG
Trigger: CCCCATTCTATCGAGTCCTCAAATGACTGGAATGTA...CCACCTAACCCACTTTCTCAAGAACAAGAACCTAGAATGAATATCCAAGCACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp TTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGAATTCTGGGTTTGGTTTGTCTGAGATGGCCATaGGCAGTTCATTATACTCCC +
Preference number: 4 (lower is better)
Translates to: FIKSHQDVWLLHRILGLVCLRWP*AVHYTP
Trigger: GGGAGTATAATGAACTGCTCATGGCCATCTCAGACA...AACCAAACCCAGAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp AGTACACATTACCCAAATCAAAAGTATTTGGTAAGCACCTGTGTTTGCTGCTGTACAGACAGGCCCGGTTaGTGTCATCAGTGTAGTAGT +
Preference number: 4 (lower is better)
Translates to: STHYPNQKYLVSTCVCCCTDRPG*CHQCSS
Trigger: ACTACTACACTGATGACATCAACCGGGCCTGTCTGT...ACAGCAGCAAACACAGGTGCTTACCAAATACTTTTGATTTGGGTAATGTGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp CATGCCACAAAGTCTTCCACTTGGCATTTTCGAGAAGAACCCATCAGAGATCATTCTTCACAGTTCATATaGGCATCTACCCAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: HATKSSTWHFREEPIRDHSSQFI*ASTQFL
Trigger: CAAGAACTGGGTAGATGCTCATATGAACTGTGAAGA...ATGATCTCTGATGGGTTCTTCTCGAAAATGCCAAGTGGAAGACTTTGTGGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp TGTTCTCTTCCCTCATCTGGATCAGTAACTAGTTGGTTGGTCTTCAGCTGTGCTTCTGCATTTGCAAAATaGACATCTGCAGCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: CSLPSSGSVTSWLVFSCASAFAK*TSAASV
Trigger: AACTGAAGCTGCAGATGTTCATTTTGCAAATGCAGA...AGCACAGCTGAAGACCAACCAACTAGTTACTGATCCAGATGAGGGAAGAGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp ATCACTGGCAGGAAAGAACACAAGATTCTGACAACTAAAGTTGCTGTTTTTCTCGAAGTAGAAAGTGGGTaGGTACCAAACACAGGCCGA +
Preference number: 4 (lower is better)
Translates to: ITGRKEHKILTTKVAVFLEVESG*VPNTGR
Trigger: TCGGCCTGTGTTTGGTACTCACCCACTTTCTACTTC...GAGAAAAACAGCAACTTTAGTTGTCAGAATCTTGTGTTCTTTCCTGCCAGTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp GTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGAATTCACATCAAAACACGTGTaGATTCTGCAACTGAGATCC +
Preference number: 4 (lower is better)
Translates to: VPRHLSNPTKMFGFCTEFTSKHV*ILQLRS
Trigger: GGATCTCAGTTGCAGAATGCACACGTGTTTTGATGT...GAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR GCA 90 bp GTTCTTAAAATGGTTATGATTTGGGACCTTCTTACGCTTGATGCAGAGGGTATCTACAAGAACAGAGGTTaGATAGCTCGAGGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: VLKMVMIWDLLTLDAEGIYKNRG*IARGAW
Trigger: CCAAGCACCTCGAGCTATGCAACCTCTGTTCTTGTA...GATACCCTCTGCATCAAGCGTAAGAAGGTCCCAAATCATAACCATTTTAAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp GTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGAATTCAAGATGTTTGGCTTTTaGACCGAATTCTGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: VPRHLSNPTKMFGFCTEFKMFGF*TEFWVW
Trigger: CCAAACCCAGAATTCGGTGCAAAAGCCAAACATCTT...GAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR GCA 90 bp AAATGTTCTCTTCCCTCATCTGGATCAGTAACTAGTTGGTTGGTCTTCAGCTGTCTTTGGGAGAGAAGCTaGATTAGAAACCAGCCACTA +
Preference number: 4 (lower is better)
Translates to: KCSLPSSGSVTSWLVFSCLWERS*IRNQPL
Trigger: TAGTGGCTGGTTTCTAATGCAGCTTCTCTCCCAAAG...ACAGCTGAAGACCAACCAACTAGTTACTGATCCAGATGAGGGAAGAGAACATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp GTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGAATTCCCCAAACCCAGTCTCTaGTTCATCTACTTTCTGATT +
Preference number: 4 (lower is better)
Translates to: VPRHLSNPTKMFGFCTEFPKPSL*FIYFLI
Trigger: AATCAGAAAGTAGATGAAGCAGAGACTGGGTTTGGG...GAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp GTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGAATTCTGCCTGACTTTCCTCTaGCAAGATAAGCTCAATAAG +
Preference number: 4 (lower is better)
Translates to: VPRHLSNPTKMFGFCTEFCLTFL*QDKLNK
Trigger: CTTATTGAGCTTATCTTGGCAGAGGAAAGTCAGGCA...GAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp ATCACTGGCAGGAAAGAACACAAGATTCTGACAACTAAAGTTGCTGTTTTTCTCGAGAGTGGGAAGAGATaGAACCAGTGGTCCAACCAA +
Preference number: 4 (lower is better)
Translates to: ITGRKEHKILTTKVAVFLESGKR*NQWSNQ
Trigger: TTGGTTGGACCACTGGTTGCATCTCTTCCCACTCTC...GAGAAAAACAGCAACTTTAGTTGTCAGAATCTTGTGTTCTTTCCTGCCAGTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp GAGCCTCAGCTGGATTTAAATCTGGAGCATGCCACAAAGTCTTCCACTTGGCATCATTTTAAAGCTTCTTaGATCCTCCATACATTGGAG +
Preference number: 4 (lower is better)
Translates to: EPQLDLNLEHATKSSTWHHFKAS*ILHTLE
Trigger: CTCCAATGTATGGAGGATGCAAGAAGCTTTAAAATG...ATGCCAAGTGGAAGACTTTGTGGCATGCTCCAGATTTAAATCCAGCTGAGGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp AGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGAAATCCTATAGGAGGTaGTGCCACCAATGTACAATT +
Preference number: 4 (lower is better)
Translates to: STPGPKAFIKSHQDVWLLKSYRR*CHQCTI
Trigger: AATTGTACATTGGTGGCAGCACCTCCTATAGGATTT...CAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp AGGTGCTTGGATATTCATTCTAGGTTCTTGTTCTTGAGAAAGTGGGTTAGGTGGGACAAGGTATTTTGGTaGAGGGTAGACAGAAGAGAG +
Preference number: 4 (lower is better)
Translates to: RCLDIHSRFLFLRKWVRWDKVFW*RVDRRE
Trigger: CTCTCTTCTGTCTACCCTGCACCAAAATACCTTGTC...CCACCTAACCCACTTTCTCAAGAACAAGAACCTAGAATGAATATCCAAGCACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp GGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGAATTCTGGGTTTCACCCTCTGAGAGGTTaGTGCATTTATCGAGTACTA +
Preference number: 4 (lower is better)
Translates to: GIYQIPPRCLAFAPNSGFHPLRG*CIYRVL
Trigger: TAGTACTCGATAAATGCACCAACCTCTCAGAGGGTG...AAACCCAGAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CCA 90 bp AGCTCGAGGTGCTTGGATATTCATTCTAGGTTCTTGTTCTTGAGAAAGTGGGTTGGAGATGGCAGCATATaGATAGATCCGGTCATTGAT +
Preference number: 4 (lower is better)
Translates to: SSRCLDIHSRFLFLRKWVGDGSI*IDPVID
Trigger: ATCAATGACCGGATCTATCCATATGCTGCCATCTCC...AACCCACTTTCTCAAGAACAAGAACCTAGAATGAATATCCAAGCACCTCGAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CCA 90 bp CTAGAGCGACTCCTTGCATGGCTAGTACAGACCCTCTGTTTTTCTCTGACAATAATTCTTCATAGGAGATaGCAGCATATGGATAGATCC +
Preference number: 4 (lower is better)
Translates to: LERLLAWLVQTLCFSLTIILHRR*QHMDRS
Trigger: GGATCTATCCATATGCTGCCATCTCCTATGAAGAAT...TATTGTCAGAGAAAAACAGAGGGTCTGTACTAGCCATGCAAGGAGTCGCTCTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp CAAGGGAGAAAGGTGGTTCCTTGGACTATCAGGAATTGGTGTTTAAGACACAGTTTTTGCACCGAATTCTaGGTTTGGTTCCCTGAAAGA +
Preference number: 4 (lower is better)
Translates to: QGRKVVPWTIRNWCLRHSFCTEF*VWFPER
Trigger: TCTTTCAGGGAACCAAACCCAGAATTCGGTGCAAAA...ACTGTGTCTTAAACACCAATTCCTGATAGTCCAAGGAACCACCTTTCTCCCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp ATCACTGGCAGGAAAGAACACAAGATTCTGACAACTAAAGTTGCTGTTTTTCTCAGGGAAGGTTCTATATaGTGGCAAGGCCTGACTGGT +
Preference number: 4 (lower is better)
Translates to: ITGRKEHKILTTKVAVFLREGSI*WQGLTG
Trigger: ACCAGTCAGGCCTTGCCACCATATAGAACCTTCCCT...GAGAAAAACAGCAACTTTAGTTGTCAGAATCTTGTGTTCTTTCCTGCCAGTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp TTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGAATTCTGGGTTTGGTTGAGGAAACTAAGGCATaGTCAAGGGAAGTCACTGTG +
Preference number: 4 (lower is better)
Translates to: FIKSHQDVWLLHRILGLVEETKA*SREVTV
Trigger: CACAGTGACTTCCCTTGACCATGCCTTAGTTTCCTC...AACCAAACCCAGAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp CTAGAGCGACTCCTTGCATGGCTAGTACAGACCCTCTGTTTTTCTCTGACAATACTAGAGAAAGACTATTaGAAATCCTATAGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: LERLLAWLVQTLCFSLTILEKDY*KSYRRC
Trigger: GCACCTCCTATAGGATTTCCAATAGTCTTTCTCTAG...TATTGTCAGAGAAAAACAGAGGGTCTGTACTAGCCATGCAAGGAGTCGCTCTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp TCAAATGGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCCTGTCCGTGAAGTTTCTCATAATGGTCTCATaGGATACTTTTATTGTGCTG +
Preference number: 4 (lower is better)
Translates to: SNGLTRFSSPAVFLSVKFLIMVS*DTFIVL
Trigger: CAGCACAATAAAAGTATCCCATGAGACCATTATGAG...AAACTTCACGGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp CACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCAAATACTGTACACATCTaGCATCTTTTCTTCTGGTAC +
Preference number: 4 (lower is better)
Translates to: HSRSQGIYQIPPRCLAFANTVHI*HLFFWY
Trigger: GTACCAGAAGAAAAGATGTCAGATGTGTACAGTATT...TGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp GCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGAATTCTGGGTTTGTCTTCACAGTTCATATaGGCATCTACCCAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: AFIKSHQDVWLLHRILGLSSQFI*ASTQFL
Trigger: CAAGAACTGGGTAGATGCTCATATGAACTGTGAAGA...CAAACCCAGAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp AGGTGCTTGGATATTCATTCTAGGTTCTTGTTCTTGAGAAAGTGGGTTAGGTGGCTTGAATTTCTACGGTaGCTGTACCACCTATCTGTT +
Preference number: 4 (lower is better)
Translates to: RCLDIHSRFLFLRKWVRWLEFLR*LYHLSV
Trigger: AACAGATAGGTGGTACAGTCACCGTAGAAATTCAAG...CCACCTAACCCACTTTCTCAAGAACAAGAACCTAGAATGAATATCCAAGCACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp GGATTTAAATCTGGAGCATGCCACAAAGTCTTCCACTTGGCATTTTCGAGAAGAAAATGTTCCTTGAGTTaGTGCTTGGGTATAGTAGCC +
Preference number: 4 (lower is better)
Translates to: GFKSGACHKVFHLAFSRRKCSLS*CLGIVA
Trigger: GGCTACTATACCCAAGCATCAACTCAAGGAACATTT...TCTTCTCGAAAATGCCAAGTGGAAGACTTTGTGGCATGCTCCAGATTTAAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp GCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGAATTCTGGGTTTGTTGCATAGCTCGAGGTaGTTGGATATTCATTCTAGG +
Preference number: 4 (lower is better)
Translates to: AFIKSHQDVWLLHRILGLLHSSR*LDIHSR
Trigger: CCTAGAATGAATATCCAAGCACCTCGAGCTATGCAA...CAAACCCAGAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR GCA 90 bp CTAGAGCGACTCCTTGCATGGCTAGTACAGACCCTCTGTTTTTCTCTGACAATATGCAAAATGAACATCTaGAGCTTCAGTTTCTGCATT +
Preference number: 4 (lower is better)
Translates to: LERLLAWLVQTLCFSLTICKMNI*SFSFCI
Trigger: AATGCAGAAACTGAAGCTGCAGATGTTCATTTTGCA...TATTGTCAGAGAAAAACAGAGGGTCTGTACTAGCCATGCAAGGAGTCGCTCTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp CCCAGACATGGGCAGAAGACTGTTGTCAGGCCAAAGACGGAGTTAAATATATCATTCAGTTTCTGCATTTaGAAAATGAACATCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PRHGQKTVVRPKTELNISFSFCI*KMNICS
Trigger: GCTGCAGATGTTCATTTTGCAAATGCAGAAACTGAA...TGATATATTTAACTCCGTCTTTGGCCTGACAACAGTCTTCTGCCCATGTCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp CAAGGGAGAAAGGTGGTTCCTTGGACTATCAGGAATTGGTGTTTAAGACACAGTTGTGAAGAAACAAAATaGCAGATACAGATGCTGGTG +
Preference number: 4 (lower is better)
Translates to: QGRKVVPWTIRNWCLRHSCEETK*QIQMLV
Trigger: CACCAGCATCTGTATCTGGCATTTTGTTTCTTCACA...ACTGTGTCTTAAACACCAATTCCTGATAGTCCAAGGAACCACCTTTCTCCCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp TTCAGTCACTTGTTTTGGTTATCTTCCTCATTAGAATGTAAGCTTGACGAAAGTAGCCAGGTGTGGTGGTaGACGCTTTTAGTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: FSHLFWLSSSLECKLDESSQVWW*TLLVSA
Trigger: AGCTGAGACTAAAAGCGTGCACCACCACACCTGGCT...ACTTTCGTCAAGCTTACATTCTAATGAGGAAGATAACCAAAACAAGTGACTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp AGGTGCTTGGATATTCATTCTAGGTTCTTGTTCTTGAGAAAGTGGGTTAGGTGGCAACTCAGGCATAAGTaGTCTTGCTGTCTCCAATTT +
Preference number: 4 (lower is better)
Translates to: RCLDIHSRFLFLRKWVRWQLRHK*SCCLQF
Trigger: AAATTGGAGACAGCAAGAGCACTTATGCCTGAGTTG...CCACCTAACCCACTTTCTCAAGAACAAGAACCTAGAATGAATATCCAAGCACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp CTTCTCTTCTCCAGCAGTCTTCCTGTCCGTGAAGTTTCCTTCCAGATTGTTACACAGCATATAATACACTaGAGTGGACTTCCAAATGTT +
Preference number: 4 (lower is better)
Translates to: LLFSSSLPVREVSFQIVTQHIIH*SGLPNV
Trigger: AACATTTGGAAGTCCACTGCAGTGTATTATATGCTG...TGTAACAATCTGGAAGGAAACTTCACGGACAGGAAGACTGCTGGAGAAGAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp GGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGAATTCTGGGTTTACAAAGTCTTCCACTTaGCATTTTCGAGAAGAACCC +
Preference number: 4 (lower is better)
Translates to: GIYQIPPRCLAFAPNSGFTKSST*HFREEP
Trigger: GGGTTCTTCTCGAAAATGCCAAGTGGAAGACTTTGT...AAACCCAGAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CCA 90 bp CATTTAACGTTAGCCAGAACCTCCCTGGCTAATGTTAAGTTTATACCAAAAGAATCCCCAGACCTCAAATaGGCTAACACGCTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: HLTLARTSLANVKFIPKESPDLK*ANTLLF
Trigger: GAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGGGGA...TTCTTTTGGTATAAACTTAACATTAGCCAGGGAGGTTCTGGCTAACGTTAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp AGCTCGAGGTGCTTGGATATTCATTCTAGGTTCTTGTTCTTGAGAAAGTGGGTTTCAGCCTCTGGTACCTaGGTGACAACAGAAATATTT +
Preference number: 4 (lower is better)
Translates to: SSRCLDIHSRFLFLRKWVSASGT*VTTEIF
Trigger: AAATATTTCTGTTGTCACCCAGGTACCAGAGGCTGA...AACCCACTTTCTCAAGAACAAGAACCTAGAATGAATATCCAAGCACCTCGAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR CAA 72 bp CTACTGACCAGTACACATTACCCAAATCAAAAGTATTaGGTAAGCACCTGTGTTTGCTGCTGTCAGAAACTG +
Preference number: 4 (lower is better)
Translates to: LLTSTHYPNQKY*VSTCVCCCQKL
Trigger: CAGTTTCTGACAGCAGCAAACACAGGTGCTTACCAAATACTTTTGATTTGGGTAATGTGTACTGGTCAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp AAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGAATTCTGGGTGGAGGGTTTTTATTCTaGTTATTCCAGACGACAAGT +
Preference number: 4 (lower is better)
Translates to: KAFIKSHQDVWLLHRILGGGFLF*LFQTTS
Trigger: ACTTGTCGTCTGGAATAATCAGAATAAAAACCCTCC...ACCCAGAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR TCA 90 bp ATCACTGGCAGGAAAGAACACAAGATTCTGACAACTAAAGTTGCTGTTTTTCTCCATCTACCCAGTTCTTaGTATCCCCAGGCATTTTGT +
Preference number: 4 (lower is better)
Translates to: ITGRKEHKILTTKVAVFLHLPSS*YPQAFC
Trigger: ACAAAATGCCTGGGGATATCAAGAACTGGGTAGATG...GAGAAAAACAGCAACTTTAGTTGTCAGAATCTTGTGTTCTTTCCTGCCAGTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp CAACTGTTGCAAAGCAGTTGTATAGCAGCATTTAACGTTAGCCAGAACCTCCCTTTCTTAAAATGGTTATaGTTTGGGACCTTCTTACGC +
Preference number: 4 (lower is better)
Translates to: QLLQSSCIAAFNVSQNLPFLKWL*FGTFLR
Trigger: GCGTAAGAAGGTCCCAAATCATAACCATTTTAAGAA...AGGGAGGTTCTGGCTAACGTTAAATGCTGCTATACAACTGCTTTGCAACAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp CAACTGTTGCAAAGCAGTTGTATAGCAGCATTTAACGTTAGCCAGAACCTCCCTTCAATAAGTATTTGTTaGCTGAAGGAACCCATCACA +
Preference number: 4 (lower is better)
Translates to: QLLQSSCIAAFNVSQNLPSISIC*LKEPIT
Trigger: TGTGATGGGTTCCTTCAGTCAACAAATACTTATTGA...AGGGAGGTTCTGGCTAACGTTAAATGCTGCTATACAACTGCTTTGCAACAGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp AGGTGCTTGGATATTCATTCTAGGTTCTTGTTCTTGAGAAAGTGGGTTAGGTGGTTTAAATCTGGAGCATaGCACAAAGTCTTCCACTTG +
Preference number: 4 (lower is better)
Translates to: RCLDIHSRFLFLRKWVRWFKSGA*HKVFHL
Trigger: CAAGTGGAAGACTTTGTGGCATGCTCCAGATTTAAA...CCACCTAACCCACTTTCTCAAGAACAAGAACCTAGAATGAATATCCAAGCACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR GCA 90 bp CACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCATGCAGCTTCAGTTTCTaGATTTGCAAAATGAACAAA +
Preference number: 4 (lower is better)
Translates to: HSRSQGIYQIPPRCLAFACSFSF*ICKMNK
Trigger: TTTGTTCATTTTGCAAATGCAGAAACTGAAGCTGCA...TGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp TTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGAATTCTGGGTTTGGTTCATTCTTCATAGGAGATaGCAGCATATGGATAGATCC +
Preference number: 4 (lower is better)
Translates to: LSNPTKMFGFCTEFWVWFILHRR*QHMDRS
Trigger: GGATCTATCCATATGCTGCCATCTCCTATGAAGAAT...GAACCAAACCCAGAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CCA 90 bp AAATGTTCTCTTCCCTCATCTGGATCAGTAACTAGTTGGTTGGTCTTCAGCTGTCTTGAATTTCTTTCGTaGGGTTACCTTGATAACTGC +
Preference number: 4 (lower is better)
Translates to: KCSLPSSGSVTSWLVFSCLEFLS*GYLDNC
Trigger: GCAGTTATCAAGGTAACCCCACGAAAGAAATTCAAG...ACAGCTGAAGACCAACCAACTAGTTACTGATCCAGATGAGGGAAGAGAACATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp CACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCAAAAATGGTTATGATTTaGGACCTTCTTACGCTTGAT +
Preference number: 4 (lower is better)
Translates to: HSRSQGIYQIPPRCLAFAKMVMI*DLLTLD
Trigger: ATCAAGCGTAAGAAGGTCCCAAATCATAACCATTTT...TGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp TTCAGTCACTTGTTTTGGTTATCTTCCTCATTAGAATGTAAGCTTGACGAAAGTGCAGACACAGCTGCCTaGTACTTCTTGAGAACTACC +
Preference number: 4 (lower is better)
Translates to: FSHLFWLSSSLECKLDESADTAA*YFLRTT
Trigger: GGTAGTTCTCAAGAAGTACCAGGCAGCTGTGTCTGC...ACTTTCGTCAAGCTTACATTCTAATGAGGAAGATAACCAAAACAAGTGACTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp CATTTAACGTTAGCCAGAACCTCCCTGGCTAATGTTAAGTTTATACCAAAAGAAAGTCATCCTCTCCACTaGGATGGTATAGATGACATG +
Preference number: 4 (lower is better)
Translates to: HLTLARTSLANVKFIPKESHPLH*DGIDDM
Trigger: CATGTCATCTATACCATCTCAGTGGAGAGGATGACT...TTCTTTTGGTATAAACTTAACATTAGCCAGGGAGGTTCTGGCTAACGTTAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp TTCAGTCACTTGTTTTGGTTATCTTCCTCATTAGAATGTAAGCTTGACGAAAGTGGTTACCTTGATAACTaGTTTTCCCGTGACGTTGGC +
Preference number: 4 (lower is better)
Translates to: FSHLFWLSSSLECKLDESGYLDN*FSRDVG
Trigger: GCCAACGTCACGGGAAAAGCAGTTATCAAGGTAACC...ACTTTCGTCAAGCTTACATTCTAATGAGGAAGATAACCAAAACAAGTGACTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp ATCACTGGCAGGAAAGAACACAAGATTCTGACAACTAAAGTTGCTGTTTTTCTCAAGATGTTTGGCTTTTaGACCGAATTCTGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: ITGRKEHKILTTKVAVFLKMFGF*TEFWVW
Trigger: CCAAACCCAGAATTCGGTGCAAAAGCCAAACATCTT...GAGAAAAACAGCAACTTTAGTTGTCAGAATCTTGTGTTCTTTCCTGCCAGTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp AAATGTTCTCTTCCCTCATCTGGATCAGTAACTAGTTGGTTGGTCTTCAGCTGTTGGACTATCAGGAATTaGTGTTTAAGACACAGTAGA +
Preference number: 4 (lower is better)
Translates to: KCSLPSSGSVTSWLVFSCWTIRN*CLRHSR
Trigger: TCTACTGTGTCTTAAACACCAATTCCTGATAGTCCA...ACAGCTGAAGACCAACCAACTAGTTACTGATCCAGATGAGGGAAGAGAACATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR CAA 72 bp GAAATACAAGAACAGAGGTTGCATAGCTCGAGGTGCTaGGATATTCATTCTAGGTTCTTGTTCTTGAGAAAG +
Preference number: 4 (lower is better)
Translates to: EIQEQRLHSSRC*DIHSRFLFLRK
Trigger: CTTTCTCAAGAACAAGAACCTAGAATGAATATCCAAGCACCTCGAGCTATGCAACCTCTGTTCTTGTATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343631.3
ENST00000358681.8
ENST00000395673.7
ENST00000533608.7
CDS-3UTR TCA 90 bp GTTCTTAAAATGGTTATGATTTGGGACCTTCTTACGCTTGATGCAGAGGGTATCGGGTATAGTAGCCAATaGTATATTTGCAGCTATAAG +
Preference number: 4 (lower is better)
Translates to: VLKMVMIWDLLTLDAEGIGYSSQ*YICSYK
Trigger: CTTATAGCTGCAAATATATCATTGGCTACTATACCC...GATACCCTCTGCATCAAGCGTAAGAAGGTCCCAAATCATAACCATTTTAAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR GCA 90 bp ATCACTGGCAGGAAAGAACACAAGATTCTGACAACTAAAGTTGCTGTTTTTCTCCTGTGGCTAGAAACGTaGTATCTTTCAGTGATAAAG +
Preference number: 4 (lower is better)
Translates to: ITGRKEHKILTTKVAVFLLWLET*YLSVIK
Trigger: CTTTATCACTGAAAGATAGCACGTTTCTAGCCACAG...GAGAAAAACAGCAACTTTAGTTGTCAGAATCTTGTGTTCTTTCCTGCCAGTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp AGTACACATTACCCAAATCAAAAGTATTTGGTAAGCACCTGTGTTTGCTGCTGTACCAAGAACAGTATCTaGCACACAATAACTGCTCAA +
Preference number: 4 (lower is better)
Translates to: STHYPNQKYLVSTCVCCCTKNSI*HTITAQ
Trigger: TTGAGCAGTTATTGTGTGCCAGATACTGTTCTTGGT...ACAGCAGCAAACACAGGTGCTTACCAAATACTTTTGATTTGGGTAATGTGTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR TCA 90 bp CATTTAACGTTAGCCAGAACCTCCCTGGCTAATGTTAAGTTTATACCAAAAGAACAAGGGAAGTCACTGTaGGAAAAGGACATTTTAAAG +
Preference number: 4 (lower is better)
Translates to: HLTLARTSLANVKFIPKEQGKSL*EKDILK
Trigger: CTTTAAAATGTCCTTTTCTCACAGTGACTTCCCTTG...TTCTTTTGGTATAAACTTAACATTAGCCAGGGAGGTTCTGGCTAACGTTAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CCA 90 bp GTTCTTAAAATGGTTATGATTTGGGACCTTCTTACGCTTGATGCAGAGGGTATCTATAATACACTGCAGTaGACTTCCAAATGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: VLKMVMIWDLLTLDAEGIYNTLQ*TSKCFL
Trigger: AAGGAAACATTTGGAAGTCCACTGCAGTGTATTATA...GATACCCTCTGCATCAAGCGTAAGAAGGTCCCAAATCATAACCATTTTAAGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
3UTR CAA 72 bp AAAGGACATTTTAAAGCTTCTTGCATCCTCCATACATaGGAGAAGATGGGGTTAATGGAATCCTCATTTACA +
Preference number: 4 (lower is better)
Translates to: KGHFKASCILHT*EKMGLMESSFT
Trigger: TGTAAATGAGGATTCCATTAACCCCATCTTCTCCAATGTATGGAGGATGCAAGAAGCTTTAAAATGTCCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS GCA 90 bp GCCACGGCTGCCTCCCGCTCGGCCCCGAGCTTGGTCACCGGCTCATaGCGCGGGGCGCGGGCCACCTCCGCCCAGGTCGGATCGGTCCGA +
Preference number: 5 (lower is better)
Translates to: ATAASRSAPSLVTGS*RGARATSAQVGSVR
Trigger: TCGGACCGATCCGACCTGGGCGGAGGTGGCCCGCGCCCCGCGGCATGAGCCGGTGACCAAGCTCGGGGCCGAGCGGGAGGCAGCCGTGGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000358681.8
ENST00000395673.8
ENST00000531161.6
ENST00000533608.7
ENST00000682359.1
ENST00000682815.1
ENST00000682993.1
ENST00000683000.1
ENST00000683870.1
ENST00000684039.1
ENST00000684124.1
ENST00000684533.1
CDS CCA 90 bp CCTCACACTCCTCGGCCACGGCTGCCTCCCGCTCGGCCCCGAGCTTaGTCACCGGCTCATGCCGCGGGGCGCGGGCCACCTCCGCCCAGG +
Preference number: 5 (lower is better)
Translates to: PHTPRPRLPPARPRA*SPAHAAGRGPPPPR
Trigger: CCTGGGCGGAGGTGGCCCGCGCCCCGCGGCATGAGCCGGTGACCAAGCTCGGGGCCGAGCGGGAGGCAGCCGTGGCCGAGGAGTGTGAGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000358681.8
ENST00000531161.6
ENST00000533608.7
ENST00000682359.1
ENST00000682815.1
ENST00000682993.1
ENST00000683870.1
ENST00000684039.1
ENST00000684124.1
ENST00000684533.1
CDS CCA 90 bp CTGAGTAGCTCTCGGCCACGGCTGCCTCCCGCTCGGCCCCGAGCTTaGTCACCGGCTCATGCCGCGGGGCGCGGGCCACCTCCGCCCAGG +
Preference number: 5 (lower is better)
Translates to: LSSSRPRLPPARPRA*SPAHAAGRGPPPPR
Trigger: CCTGGGCGGAGGTGGCCCGCGCCCCGCGGCATGAGCCGGTGACCAAGCTCGGGGCCGAGCGGGAGGCAGCCGTGGCCGAGAGCTACTCAG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395673.8
ENST00000683000.1
CDS GCA 90 bp GCCACCTCCGCCCAGGTCGGATCGGTCCGAATCGCCAGCCGCCACTaGCAGGGCCGAGTCTGGGCTGGCGAGCAGCGAGCGAGGGGCCGG +
Preference number: 5 (lower is better)
Translates to: ATSAQVGSVRIASRH*QGRVWAGEQRARGR
Trigger: CCGGCCCCTCGCTCGCTGCTCGCCAGCCCAGACTCGGCCCTGGCAGTGGCGGCTGGCGATTCGGACCGATCCGACCTGGGCGGAGGTGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395673.8
ENST00000533608.7
ENST00000682359.1
ENST00000682815.1
ENST00000682993.1
ENST00000683000.1
ENST00000684039.1
ENST00000684533.1
CDS CCA 90 bp ATCGGTCCGAATCGCCAGCCGCCACTGCCAGGGCCGAGTCTGGGCTaGCGAGCAGCGAGCGAGGGGCCGGTAACCGGGATCCGGGCCGTC +
Preference number: 5 (lower is better)
Translates to: IGPNRQPPLPGPSLG*RAASEGPVTGIRAV
Trigger: GACGGCCCGGATCCCGGTTACCGGCCCCTCGCTCGCTGCTCGCCAGCCCAGACTCGGCCCTGGCAGTGGCGGCTGGCGATTCGGACCGAT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395673.8
ENST00000533608.7
ENST00000682359.1
ENST00000682815.1
ENST00000682993.1
ENST00000683000.1
ENST00000684039.1
ENST00000684533.1
CDS CCA 90 bp GATGCCGCAGGCCACCACCGGACCCTGAGGCGCAGGACATCCCCCTaGGAGGAATCAGATCCCTGTGGCTCGGCCACGGCTGCCTCCCGC +
Preference number: 5 (lower is better)
Translates to: DAAGHHRTLRRRTSP*EESDPCGSATAASR
Trigger: GCGGGAGGCAGCCGTGGCCGAGCCACAGGGATCTGATTCCTCCCAGGGGGATGTCCTGCGCCTCAGGGTCCGGTGGTGGCCTGCGGCATC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343631.4
CDS TCA 90 bp CGGCTTCTGGCACCGCAAGGGATGCCGCAGGCCACCACCGGACCCTaGGGCGCAGGACATCCCCCTGGGAGGAATCAGATCCCTGTGGCT +
Preference number: 5 (lower is better)
Translates to: RLLAPQGMPQATTGP*GAGHPPGRNQIPVA
Trigger: AGCCACAGGGATCTGATTCCTCCCAGGGGGATGTCCTGCGCCTCAGGGTCCGGTGGTGGCCTGCGGCATCCCTTGCGGTGCCAGAAGCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343631.4
CDS GCA 90 bp TCTTCCTCACACTCCTCGTCCCACGGCTTCTGGCACCGCAAGGGATaGCGCAGGCCACCACCGGACCCTGAGGCGCAGGACATCCCCCTG +
Preference number: 5 (lower is better)
Translates to: SSSHSSSHGFWHRKG*RRPPPDPEAQDIPL
Trigger: CAGGGGGATGTCCTGCGCCTCAGGGTCCGGTGGTGGCCTGCGGCATCCCTTGCGGTGCCAGAAGCCGTGGGACGAGGAGTGTGAGGAAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343631.4
CDS CCA 90 bp GGCGGTGAACCCTTGAGACTGTGGTGGGATCAGCGGGAGGAAGAGTaGATTGCTCACGCTGCCCCACTTCAGGGTGGGAGGATTGCTCGA +
Preference number: 5 (lower is better)
Translates to: GGEPLRLWWDQREEE*IAHAAPLQGGRIAR
Trigger: TCGAGCAATCCTCCCACCCTGAAGTGGGGCAGCGTGAGCAATCCACTCTTCCTCCCGCTGATCCCACCACAGTCTCAAGGGTTCACCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682711.1
CDS-3UTR CAA 90 bp GTCAACCTTCCACCCTTAACCTACTACTCTGACATCAGAGTGCTGGGAGGCCTTCGCTCGGCCCCGAGCTaGGTCACCGGCTCATGCCGC +
Preference number: 5 (lower is better)
Translates to: VNLPPLTYYSDIRVLGGLRSAPS*VTGSCR
Trigger: GCGGCATGAGCCGGTGACCAAGCTCGGGGCCGAGCG...AAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAGGGTGGAAGGTTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CAA 90 bp AGGATCCTGACTCAGCGGCTGGTGCTCTTCCTGTGCACAAGCCCAGCACTCCAGTCCCGGGAGATGGTGTaGCTGACAGAGACGCCAAAG +
Preference number: 5 (lower is better)
Translates to: RILTQRLVLFLCTSPALQSREMV*LTETPK
Trigger: CTTTGGCGTCTCTGTCAGCAACACCATCTCCCGGGA...CTGGAGTGCTGGGCTTGTGCACAGGAAGAGCACCAGCCGCTGAGTCAGGATCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS TCA 90 bp CCGGTCATTGATAATCTGCAGGGTGGCCAGGGCAATGGCTTTAATTaGCTGGAAGTACGCTTCCCAGAACCACCGGGCCTCGGCCACGGC +
Preference number: 5 (lower is better)
Translates to: PVIDNLQGGQGNGFN*LEVRFPEPPGLGHG
Trigger: GCCGTGGCCGAGGCCCGGTGGTTCTGGGAAGCGTACTTCCAGTCAATTAAAGCCATTGCCCTGGCCACCCTGCAGATTATCAATGACCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682711.1
CDS CCA 90 bp TCGGTCGTAGGTGAGGACTATGGCGGTGAACCCTTGAGACTGTGGTaGGATCAGCGGGAGGAAGAGTGGATTGCTCACGCTGCCCCACTT +
Preference number: 5 (lower is better)
Translates to: SVVGEDYGGEPLRLW*DQREEEWIAHAAPL
Trigger: AAGTGGGGCAGCGTGAGCAATCCACTCTTCCTCCCGCTGATCCCACCACAGTCTCAAGGGTTCACCGCCATAGTCCTCACCTACGACCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000343631.4
ENST00000358681.8
ENST00000395673.8
ENST00000533608.7
ENST00000534048.1
ENST00000682359.1
ENST00000682711.1
ENST00000682815.1
ENST00000682993.1
ENST00000683000.1
ENST00000683299.1
ENST00000683870.1
ENST00000683881.1
ENST00000684124.1
ENST00000684533.1
CDS CCA 90 bp TACTCGGTCGTAGGTGAGGACTATGGCGGTGAACCCTTGAGACTGTaGTGGGATCAGCGGGAGGAAGAGTGGATTGCTCACGCTGCCCCA +
Preference number: 5 (lower is better)
Translates to: YSVVGEDYGGEPLRL*WDQREEEWIAHAAP
Trigger: TGGGGCAGCGTGAGCAATCCACTCTTCCTCCCGCTGATCCCACCACAGTCTCAAGGGTTCACCGCCATAGTCCTCACCTACGACCGAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000343631.4
ENST00000358681.8
ENST00000395673.8
ENST00000533608.7
ENST00000534048.1
ENST00000682359.1
ENST00000682711.1
ENST00000682815.1
ENST00000682993.1
ENST00000683000.1
ENST00000683299.1
ENST00000683870.1
ENST00000683881.1
ENST00000684124.1
ENST00000684533.1
CDS-3UTR CAA 90 bp CGCTTCTCTTCTCCAGCAGTCTTCCTGTCCGTGAAGTTTCCTTCCAGATTGTTACGCTCGGCCCCGAGCTaGGTCACCGGCTCATGCCGC +
Preference number: 5 (lower is better)
Translates to: RFSSPAVFLSVKFPSRLLRSAPS*VTGSCR
Trigger: GCGGCATGAGCCGGTGACCAAGCTCGGGGCCGAGCG...TAACAATCTGGAAGGAAACTTCACGGACAGGAAGACTGCTGGAGAAGAGAAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS TCA 90 bp AGGGGCAAGCTGAGCGGCATGTGCAAAGATTTGCTGACAAGACAGTaGGCCATCCAACAGGGCACCTCACAGCTTGCACAGCAGGAGGGT +
Preference number: 5 (lower is better)
Translates to: RGKLSGMCKDLLTRQ*AIQQGTSQLAQQEG
Trigger: ACCCTCCTGCTGTGCAAGCTGTGAGGTGCCCTGTTGGATGGCTCACTGTCTTGTCAGCAAATCTTTGCACATGCCGCTCAGCTTGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682815.1
ENST00000684124.1
CDS CCA 90 bp ACAACCGGGACACAGCCAGCTTGTAACACATCGCTCAATACTGCCTaGCCCAGCCGAGCTCCACGAAGAACCACACAGAAAGTAGCCTCC +
Preference number: 5 (lower is better)
Translates to: TTGTQPACNTSLNTA*PSRAPRRTTQKVAS
Trigger: GGAGGCTACTTTCTGTGTGGTTCTTCGTGGAGCTCGGCTGGGCCAGGCAGTATTGAGCGATGTGTTACAAGCTGGCTGTGTCCCGGTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000343631.4
ENST00000358681.8
ENST00000395673.8
ENST00000531161.6
ENST00000533608.7
ENST00000682815.1
ENST00000682947.1
ENST00000682993.1
ENST00000683000.1
ENST00000683299.1
ENST00000683870.1
ENST00000683881.1
ENST00000684039.1
ENST00000684124.1
CDS CCA 90 bp GGCGGTGAACCCTTGAGACTGTGGTGGGATCAGCGGGAGGAAGAGTaGATTGCTCACGCTGCCCCACTTCAAGAATCTTACTGTGCTGTG +
Preference number: 5 (lower is better)
Translates to: GGEPLRLWWDQREEE*IAHAAPLQESYCAV
Trigger: CACAGCACAGTAAGATTCTTGAAGTGGGGCAGCGTGAGCAATCCACTCTTCCTCCCGCTGATCCCACCACAGTCTCAAGGGTTCACCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682815.1
ENST00000684124.1
CDS CCA 90 bp CTCTTCGAATCCAGCCGCCATGCTCTAAGGAAGCTGAGCTCCCAGTaGAAGGCAACCTGCCCCAGTGGACACGGAGATCTCAGTCAAAAC +
Preference number: 5 (lower is better)
Translates to: LFESSRHALRKLSSQ*KATCPSGHGDLSQN
Trigger: GTTTTGACTGAGATCTCCGTGTCCACTGGGGCAGGTTGCCTTCCACTGGGAGCTCAGCTTCCTTAGAGCATGGCGGCTGGATTCGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683881.1
CDS-3UTR CAA 90 bp ATGGTGGCAAGGCCTGACTGGTGGCTTTGGTCTAAGACATATGGATCCCTCCTCCACCCTCCCAGGAAATaGGGGAAGCTGGGCATCCCT +
Preference number: 5 (lower is better)
Translates to: MVARPDWWLWSKTYGSLLHPPRK*GKLGIP
Trigger: AGGGATGCCCAGCTTCCCCAATTTCCTGGGAGGGTG...GAGGAGGGATCCATATGTCTTAGACCAAAGCCACCAGTCAGGCCTTGCCACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CAA 90 bp ACCTACTACTCTGACATCAGAGTGCTGGGAGGCCTTGTTCTCTCCCTCTGTCCCCTTGAGTCCAGGAGTTaGAGGCTGCAGCGAGCCATG +
Preference number: 5 (lower is better)
Translates to: TYYSDIRVLGGLVLSLCPLESRS*RLQRAM
Trigger: CATGGCTCGCTGCAGCCTCAAACTCCTGGACTCAAG...GGGACAGAGGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS CCA 90 bp AGCTGGGCCATCGCTTGTGCTGTCTCCTTGATGCGCAGTGTGTTCTaGTTAAGCACATCGATGGAGGGAACAAACAGACAGGCCCGGTTG +
Preference number: 5 (lower is better)
Translates to: SWAIACAVSLMRSVF*LSTSMEGTNRQARL
Trigger: CAACCGGGCCTGTCTGTTTGTTCCCTCCATCGATGTGCTTAACCAGAACACACTGCGCATCAAGGAGACAGCACAAGCGATGGCCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000343631.4
ENST00000358681.8
ENST00000395673.8
ENST00000529186.1
ENST00000531161.6
ENST00000533608.7
ENST00000682359.1
ENST00000682815.1
ENST00000682947.1
ENST00000682993.1
ENST00000683000.1
ENST00000683299.1
ENST00000683870.1
ENST00000683881.1
ENST00000684039.1
ENST00000684124.1
ENST00000684533.1
CDS-3UTR CAA 90 bp AGGATCCTGACTCAGCGGCTGGTGCTCTTCCTGTGCACAAGCCCAGCACTCCAGTCAGGAAAGTCATCTTaGTACAGGACAGGGTCAGCT +
Preference number: 5 (lower is better)
Translates to: RILTQRLVLFLCTSPALQSGKSS*YRTGSA
Trigger: AGCTGACCCTGTCCTGTACAAAGATGACTTTCCTGA...CTGGAGTGCTGGGCTTGTGCACAGGAAGAGCACCAGCCGCTGAGTCAGGATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CAA 90 bp CCCTTAACCTACTACTCTGACATCAGAGTGCTGGGAGGCCTTGTTCTCTCCCTCAGGTCCTCACTGTGCTaGTCAGCCTCTGGTACCTGG +
Preference number: 5 (lower is better)
Translates to: PLTYYSDIRVLGGLVLSLRSSLC*SASGTW
Trigger: CCAGGTACCAGAGGCTGACAAGCACAGTGAGGACCT...GAGGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CAA 90 bp GTCAACCTTCCACCCTTAACCTACTACTCTGACATCAGAGTGCTGGGAGGCCTTTGGCTCAGTGTGCACTaGGGCCAGGGCCAGTTCAAG +
Preference number: 5 (lower is better)
Translates to: VNLPPLTYYSDIRVLGGLWLSVH*GQGQFK
Trigger: CTTGAACTGGCCCTGGCCCAAGTGCACACTGAGCCA...AAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAGGGTGGAAGGTTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS TCA 90 bp TGGAGGGCTTCTAGGTCCTCTCTGTACTCAGGATGGAGACCCACCTaGGATGACAGGAGGAAGTATTGCCGTGGACCTGGTCCTTTCTCT +
Preference number: 5 (lower is better)
Translates to: WRASRSSLYSGWRPT*DDRRKYCRGPGPFS
Trigger: AGAGAAAGGACCAGGTCCACGGCAATACTTCCTCCTGTCATCTCAGGTGGGTCTCCATCCTGAGTACAGAGAGGACCTAGAAGCCCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000343631.4
ENST00000358681.8
ENST00000395673.8
ENST00000531161.6
ENST00000533608.7
ENST00000682359.1
ENST00000682815.1
ENST00000682947.1
ENST00000682993.1
ENST00000683000.1
ENST00000683299.1
ENST00000683870.1
ENST00000683881.1
ENST00000684039.1
ENST00000684124.1
CDS TCA 90 bp CCGGTCATTGATAATCTGCAGGGTGGCCAGGGCAATGGCTTTAATTaGCTGGAAGTACGCTTCCCAGAACCACCGGGCCTGTCTCTGCAT +
Preference number: 5 (lower is better)
Translates to: PVIDNLQGGQGNGFN*LEVRFPEPPGLSLH
Trigger: ATGCAGAGACAGGCCCGGTGGTTCTGGGAAGCGTACTTCCAGTCAATTAAAGCCATTGCCCTGGCCACCCTGCAGATTATCAATGACCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000343631.4
ENST00000395673.8
ENST00000525559.1
ENST00000533608.7
ENST00000534048.1
ENST00000682947.1
ENST00000682993.1
ENST00000683000.1
ENST00000683299.1
ENST00000683881.1
ENST00000684039.1
ENST00000684124.1
ENST00000684533.1
CDS TCA 90 bp GCTCCGCATTTGCCCTGGTCCTTTCTCTGGAAGATCCACCTCAGCTaGCAGTGGACTATAGACAGGAATGCTGACATCGTAGCCTTGCCG +
Preference number: 5 (lower is better)
Translates to: APHLPWSFLWKIHLS*QWTIDRNADIVALP
Trigger: CGGCAAGGCTACGATGTCAGCATTCCTGTCTATAGTCCACTGTCAGCTGAGGTGGATCTTCCAGAGAAAGGACCAGGGCAAATGCGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529186.1
CDS TCA 90 bp CCGGTCATTGATAATCTGCAGGGTGGCCAGGGCAATGGCTTTAATTaGCTGGAAGTACGCTTCCCAGAACCACCGGGCCTCTTCCAGTCA +
Preference number: 5 (lower is better)
Translates to: PVIDNLQGGQGNGFN*LEVRFPEPPGLFQS
Trigger: TGACTGGAAGAGGCCCGGTGGTTCTGGGAAGCGTACTTCCAGTCAATTAAAGCCATTGCCCTGGCCACCCTGCAGATTATCAATGACCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682815.1
ENST00000683870.1
CDS CCA 90 bp CAACAGGGCCCTGTCTCTGGGGACATCCAGGGCTGTGTTATAATCTaGGGGACCTCCAGGCAACATGTTGAACAACAGGTGATTCGTACC +
Preference number: 5 (lower is better)
Translates to: QQGPVSGDIQGCVII*GTSRQHVEQQVIRT
Trigger: GGTACGAATCACCTGTTGTTCAACATGTTGCCTGGAGGTCCCCCAGATTATAACACAGCCCTGGATGTCCCCAGAGACAGGGCCCTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 17 transcripts:
ENST00000343631.4
ENST00000358681.8
ENST00000395673.8
ENST00000529186.1
ENST00000531161.6
ENST00000533608.7
ENST00000682359.1
ENST00000682815.1
ENST00000682947.1
ENST00000682993.1
ENST00000683000.1
ENST00000683299.1
ENST00000683870.1
ENST00000683881.1
ENST00000684039.1
ENST00000684124.1
ENST00000684533.1
CDS-3UTR CAA 90 bp CCCTTAACCTACTACTCTGACATCAGAGTGCTGGGAGGCCTTGTTCTCTCCCTCGCTGACATCGTAGCCTaGCCGGTAAGTCCACGTAGA +
Preference number: 5 (lower is better)
Translates to: PLTYYSDIRVLGGLVLSLADIVA*PVSPRR
Trigger: TCTACGTGGACTTACCGGCAAGGCTACGATGTCAGC...GAGGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CAA 90 bp CCTGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAATATGGCGGTGAACCCTaGAGACTGTGGTGGGATCAG +
Preference number: 5 (lower is better)
Translates to: PVHKPSTPGPKAFIKSHQYGGEP*RLWWDQ
Trigger: CTGATCCCACCACAGTCTCAAGGGTTCACCGCCATA...TTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CAA 90 bp AGCATGCCACAAAGTCTTCCACTTGGCATTTTCGAGAAGAACCCATCAGAGATCCTGTGCCAGGGCTGCTaGGGGAACAGCCCACTGTGG +
Preference number: 5 (lower is better)
Translates to: SMPQSLPLGIFEKNPSEILCQGC*GNSPLW
Trigger: CCACAGTGGGCTGTTCCCCAAGCAGCCCTGGCACAG...GATCTCTGATGGGTTCTTCTCGAAAATGCCAAGTGGAAGACTTTGTGGCATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CAA 90 bp GTGCCAGGGCTGCTTGGGGAACAGCCCACTGTGGCTTCTCTTGCTGCAATGGAATCAGTAACTAGTTGGTaGGTCTTCAGCTGTGCTCAC +
Preference number: 5 (lower is better)
Translates to: VPGLLGEQPTVASLAAMESVTSW*VFSCAH
Trigger: GTGAGCACAGCTGAAGACCAACCAACTAGTTACTGA...TTCCATTGCAGCAAGAGAAGCCACAGTGGGCTGTTCCCCAAGCAGCCCTGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS TCA 90 bp GTATTGCCGTGGACCTGGTCCTTTCTCTGGAAGATCCACCTCAGCTaGCAGTGGACTATAGACAGGAATGCTGACATCGTAGCCTTGCCG +
Preference number: 5 (lower is better)
Translates to: VLPWTWSFLWKIHLS*QWTIDRNADIVALP
Trigger: CGGCAAGGCTACGATGTCAGCATTCCTGTCTATAGTCCACTGTCAGCTGAGGTGGATCTTCCAGAGAAAGGACCAGGTCCACGGCAATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000343631.4
ENST00000358681.8
ENST00000395673.8
ENST00000531161.6
ENST00000533608.7
ENST00000682359.1
ENST00000682815.1
ENST00000682947.1
ENST00000682993.1
ENST00000683000.1
ENST00000683299.1
ENST00000683870.1
ENST00000683881.1
ENST00000684039.1
ENST00000684124.1
CDS GCA 90 bp GTGATTCGTACCTCGATCCCACCTAGAGAGCTGGGCCATCGCTTGTaGTGTCTCCTTGATGCGCAGTGTGTTCTGGTTAAGCACATCGAT +
Preference number: 5 (lower is better)
Translates to: VIRTSIPPRELGHRL*CLLDAQCVLVKHID
Trigger: ATCGATGTGCTTAACCAGAACACACTGCGCATCAAGGAGACAGCACAAGCGATGGCCCAGCTCTCTAGGTGGGATCGAGGTACGAATCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000343631.4
ENST00000358681.8
ENST00000395673.8
ENST00000529186.1
ENST00000531161.6
ENST00000533608.7
ENST00000682359.1
ENST00000682815.1
ENST00000682947.1
ENST00000682993.1
ENST00000683000.1
ENST00000683299.1
ENST00000683870.1
ENST00000683881.1
ENST00000684039.1
ENST00000684124.1
ENST00000684533.1
CDS GCA 90 bp CCCATCCCCTACCAGCTGCAGGCCCACCCTATGGTATGGCTTCCTTaGCATTCTGCATATCCCTCCTGGAGTTTGAAGACAGGAAGTTTT +
Preference number: 5 (lower is better)
Translates to: PIPYQLQAHPMVWLP*HSAYPSWSLKTGSF
Trigger: AAAACTTCCTGTCTTCAAACTCCAGGAGGGATATGCAGAATGGCAAGGAAGCCATACCATAGGGTGGGCCTGCAGCTGGTAGGGGATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683881.1
CDS GCA 90 bp CTTCCCCAACACACAAGTGTTGCTGAGTCCAGAAAGGACACTTCATaGCATTCCCTAGGGCAGAGCCAGTGTGTTTGGACCCTATGCCCT +
Preference number: 5 (lower is better)
Translates to: LPQHTSVAESRKDTS*HSLGQSQCVWTLCP
Trigger: AGGGCATAGGGTCCAAACACACTGGCTCTGCCCTAGGGAATGGCATGAAGTGTCCTTTCTGGACTCAGCAACACTTGTGTGTTGGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684437.1
CDS CCA 90 bp CTCTTCCTAGCTTCTGGTAGCTGGCTGTCAATCTCTGGCATTGCCTaGCTTGTAGATGCCTCACTCCAACCCTCCATCTTCACAAGGCCA +
Preference number: 5 (lower is better)
Translates to: LFLASGSWLSISGIA*LVDASLQPSIFTRP
Trigger: TGGCCTTGTGAAGATGGAGGGTTGGAGTGAGGCATCTACAAGCCAGGCAATGCCAGAGATTGACAGCCAGCTACCAGAAGCTAGGAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684437.1
CDS-3UTR CAA 90 bp TGCTCTTCCTGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCGCTGACATCGTAGCCTaGCCGGTAAGTCCACGTAGA +
Preference number: 5 (lower is better)
Translates to: CSSCAQAQHSRSQGIYQIADIVA*PVSPRR
Trigger: TCTACGTGGACTTACCGGCAAGGCTACGATGTCAGC...GATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGGAAGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CAA 90 bp CCAGACCTCAAATGGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCCTGTCCGTACTGACTCTCCATGTTaGACCTGGAGGGCTTCTAGG +
Preference number: 5 (lower is better)
Translates to: PDLKWANTLLFSSSLPVRTDSPC*TWRASR
Trigger: CCTAGAAGCCCTCCAGGTCAAACATGGAGAGTCAGT...ACGGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CAA 90 bp CCTGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATAGACTGGGCACCTaGGACACTTCAGTGATGACC +
Preference number: 5 (lower is better)
Translates to: PVHKPSTPGPKAFIKSHQDRLGT*DTSVMT
Trigger: GGTCATCACTGAAGTGTCCAAGGTGCCCAGTCTATC...TTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CAA 90 bp GAGCCTCAGCTGGATTTAAATCTGGAGCATGCCACAAAGTCTTCCACTTGGCATCGGTGTTCCACCACCTaGAGAGGCATGGTCCCGAAG +
Preference number: 5 (lower is better)
Translates to: EPQLDLNLEHATKSSTWHRCSTT*RGMVPK
Trigger: CTTCGGGACCATGCCTCTCAAGGTGGTGGAACACCG...ATGCCAAGTGGAAGACTTTGTGGCATGCTCCAGATTTAAATCCAGCTGAGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CAA 90 bp GATTCCCCAGACCTCAAATGGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCCTGAGACCATGCTATTGTaGCACTCCAGCCTGGGTGAC +
Preference number: 5 (lower is better)
Translates to: DSPDLKWANTLLFSSSLPETMLL*HSSLGD
Trigger: GTCACCCAGGCTGGAGTGCAACAATAGCATGGTCTC...AGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGGGGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CAA 90 bp ATGATTCCCCAGACCTCAAATGGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCAAGAGGCCTGGAAGCTaGGGAGAGGGGGCCAAACTT +
Preference number: 5 (lower is better)
Translates to: MIPQTSNGLTRFSSPAVFKRPGS*GEGAKL
Trigger: AAGTTTGGCCCCCTCTCCCAAGCTTCCAGGCCTCTT...GAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGGGGAATCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS TCA 90 bp CATATGCCAGAGCAACTAGAGGCTTCCCCAACACACAAGTGTTGCTaGGTCCAGAAAGGACACTTCATGCCATTCCCTAGGGCAGAGCCA +
Preference number: 5 (lower is better)
Translates to: HMPEQLEASPTHKCC*VQKGHFMPFPRAEP
Trigger: TGGCTCTGCCCTAGGGAATGGCATGAAGTGTCCTTTCTGGACTCAGCAACACTTGTGTGTTGGGGAAGCCTCTAGTTGCTCTGGCATATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684437.1
CDS CCA 90 bp ACATTTTTCCTTCCACCCACCCTGACAGCTGGACCATGCCTCATGTaGCTAGCACTGGAATTCACTTACCACAGCAGGAGGGTCATTCCA +
Preference number: 5 (lower is better)
Translates to: TFFLPPTLTAGPCLM*LALEFTYHSRRVIP
Trigger: TGGAATGACCCTCCTGCTGTGGTAAGTGAATTCCAGTGCTAGCCACATGAGGCATGGTCCAGCTGTCAGGGTGGGTGGAAGGAAAAATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525559.1
CDS CCA 90 bp GACAGGAAGTTTTGGGACAAATGCAGGCAAGGAGCTGCCCTCCGCTaGCCCATGTTAGAACTTCCCAAGAAGCTCTCAAGGTCTATGTGT +
Preference number: 5 (lower is better)
Translates to: DRKFWDKCRQGAALR*PMLELPKKLSRSMC
Trigger: ACACATAGACCTTGAGAGCTTCTTGGGAAGTTCTAACATGGGCCAGCGGAGGGCAGCTCCTTGCCTGCATTTGTCCCAAAACTTCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000683000.1
ENST00000683881.1
CDS-3UTR CAA 90 bp AGCATGCCACAAAGTCTTCCACTTGGCATTTTCGAGAAGAACCCATCAGAGATCGGGAGGAAGAGTGGATaGCTCACGCTGCCCCACTTC +
Preference number: 5 (lower is better)
Translates to: SMPQSLPLGIFEKNPSEIGRKSG*LTLPHF
Trigger: GAAGTGGGGCAGCGTGAGCAATCCACTCTTCCTCCC...GATCTCTGATGGGTTCTTCTCGAAAATGCCAAGTGGAAGACTTTGTGGCATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CAA 90 bp ACCTACTACTCTGACATCAGAGTGCTGGGAGGCCTTGTTCTCTCCCTCTGTCCCTCAGGAAAGTCATCTTaGTACAGGACAGGGTCAGCT +
Preference number: 5 (lower is better)
Translates to: TYYSDIRVLGGLVLSLCPSGKSS*YRTGSA
Trigger: AGCTGACCCTGTCCTGTACAAAGATGACTTTCCTGA...GGGACAGAGGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CAA 90 bp TGCTCTTCCTGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCATGGGCAGAAGACTGTaGTCAGGCCAAAGACGGAGT +
Preference number: 5 (lower is better)
Translates to: CSSCAQAQHSRSQGIYQIMGRRL*SGQRRS
Trigger: ACTCCGTCTTTGGCCTGACAACAGTCTTCTGCCCAT...GATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGGAAGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CAA 90 bp GATTCCCCAGACCTCAAATGGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCCTGGGACCTTCTTACGCTaGATGCAGAGGGTATCAGAC +
Preference number: 5 (lower is better)
Translates to: DSPDLKWANTLLFSSSLPGTFLR*MQRVSD
Trigger: GTCTGATACCCTCTGCATCAAGCGTAAGAAGGTCCC...AGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGGGGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CAA 90 bp CCCTTAACCTACTACTCTGACATCAGAGTGCTGGGAGGCCTTGTTCTCTCCCTCAAAAGAGGCTGTGGCTaGAGCTTACAATGCCCTCAC +
Preference number: 5 (lower is better)
Translates to: PLTYYSDIRVLGGLVLSLKRGCG*SLQCPH
Trigger: GTGAGGGCATTGTAAGCTCAAGCCACAGCCTCTTTT...GAGGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CAA 90 bp ACCTACTACTCTGACATCAGAGTGCTGGGAGGCCTTGTTCTCTCCCTCTGTCCCAAGAATGACACAAGGTaGCCTGTACAGACCCACACA +
Preference number: 5 (lower is better)
Translates to: TYYSDIRVLGGLVLSLCPKNDTR*PVQTHT
Trigger: TGTGTGGGTCTGTACAGGCAACCTTGTGTCATTCTT...GGGACAGAGGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CAA 90 bp CCCTTAACCTACTACTCTGACATCAGAGTGCTGGGAGGCCTTGTTCTCTCCCTCAAGAGAACTGCTCATTaGGTAATCCACCCTGACGGG +
Preference number: 5 (lower is better)
Translates to: PLTYYSDIRVLGGLVLSLKRTAH*VIHPDG
Trigger: CCCGTCAGGGTGGATTACCAAATGAGCAGTTCTCTT...GAGGGAGAGAACAAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS TCA 90 bp AACCGGCACATCACGGATGCTGCGCTTCTCTACATTCCAGTCATTTaGGGACTCGATAGAATGGGGCCAAAACTGAAACATGCCAGTGGC +
Preference number: 5 (lower is better)
Translates to: NRHITDAALLYIPVI*GLDRMGPKLKHASG
Trigger: GCCACTGGCATGTTTCAGTTTTGGCCCCATTCTATCGAGTCCTCAAATGACTGGAATGTAGAGAAGCGCAGCATCCGTGATGTGCCGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000343631.4
ENST00000358681.8
ENST00000395673.8
ENST00000531161.6
ENST00000533608.7
ENST00000682359.1
ENST00000682815.1
ENST00000682947.1
ENST00000682993.1
ENST00000683000.1
ENST00000683299.1
ENST00000683870.1
ENST00000683881.1
ENST00000684039.1
ENST00000684124.1
ENST00000684533.1
CDS TCA 90 bp CTCCTATATGATTCCCGGATACTGTTTCGGGGGAGGGCAGAGCCTTaGGTGTGGCTGCATCATCTGCCACATACTTACCATGTTACTGCA +
Preference number: 5 (lower is better)
Translates to: LLYDSRILFRGRAEP*VWLHHLPHTYHVTA
Trigger: TGCAGTAACATGGTAAGTATGTGGCAGATGATGCAGCCACACTCAAGGCTCTGCCCTCCCCCGAAACAGTATCCGGGAATCATATAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683881.1
CDS GCA 90 bp CTTCGGATAAATGGAGCTCTCCCCATCAGTGCCCACATGGTAAACTaGTTCCTGCCTAGCGAGCTGAGTATTGCCAAGCTTGAATGTTGC +
Preference number: 5 (lower is better)
Translates to: LRINGALPISAHMVN*FLPSELSIAKLECC
Trigger: GCAACATTCAAGCTTGGCAATACTCAGCTCGCTAGGCAGGAAGCAGTTTACCATGTGGGCACTGATGGGGAGAGCTCCATTTATCCGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683881.1
CDS-3UTR CAA 90 bp GCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCGCTTGTGCTGTCTCCTaGATGCGCAGTGTGTTCTGG +
Preference number: 5 (lower is better)
Translates to: ALQVPRHLSNPTKMFGFCACAVS*MRSVFW
Trigger: CCAGAACACACTGCGCATCAAGGAGACAGCACAAGC...GCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CAA 90 bp CACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCATCGAAGACCTGGTGCTaGTGGCAGCGCTTACGGACA +
Preference number: 5 (lower is better)
Translates to: HSRSQGIYQIPPRCLAFASKTWC*WQRLRT
Trigger: TGTCCGTAAGCGCTGCCACAAGCACCAGGTCTTCGA...TGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CAA 90 bp TCCTGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAATGGAACCCGGATTTaGGGCCAGAGAGAATCTTCT +
Preference number: 5 (lower is better)
Translates to: SCAQAQHSRSQGIYQIPPNGTRI*GQRESS
Trigger: AGAAGATTCTCTCTGGCCCAAAATCCGGGTTCCATT...TGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CAA 90 bp TGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGAGACCTCATAACCAAATaGCAGCTCGTCAGAGGTCAG +
Preference number: 5 (lower is better)
Translates to: CAQAQHSRSQGIYQIPPRDLITK*QLVRGQ
Trigger: CTGACCTCTGACGAGCTGCAATTTGGTTATGAGGTC...TCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CAA 90 bp CGCTTCTCTTCTCCAGCAGTCTTCCTGTCCGTGAAGTTTCCTTCCAGATTGTTAGCTTTTCCCGTGACGTaGGCCACCAGGAAGTTCATG +
Preference number: 5 (lower is better)
Translates to: RFSSPAVFLSVKFPSRLLAFPVT*ATRKFM
Trigger: CATGAACTTCCTGGTGGCCAACGTCACGGGAAAAGC...TAACAATCTGGAAGGAAACTTCACGGACAGGAAGACTGCTGGAGAAGAGAAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CAA 90 bp GTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGAATTCCGGTGTTCCACCACCTaGAGAGGCATGGTCCCGAAG +
Preference number: 5 (lower is better)
Translates to: VPRHLSNPTKMFGFCTEFRCSTT*RGMVPK
Trigger: CTTCGGGACCATGCCTCTCAAGGTGGTGGAACACCG...GAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CAA 90 bp GTCAACCTTCCACCCTTAACCTACTACTCTGACATCAGAGTGCTGGGAGGCCTTCATAAGCTGCCAATGTaGGGGAAGCTCTTCAGCTTC +
Preference number: 5 (lower is better)
Translates to: VNLPPLTYYSDIRVLGGLHKLPM*GKLFSF
Trigger: GAAGCTGAAGAGCTTCCCCAACATTGGCAGCTTATG...AAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAGGGTGGAAGGTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CAA 90 bp GATTCCCCAGACCTCAAATGGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCCTCATAAGCTGCCAATGTaGGGGAAGCTCTTCAGCTTC +
Preference number: 5 (lower is better)
Translates to: DSPDLKWANTLLFSSSLPHKLPM*GKLFSF
Trigger: GAAGCTGAAGAGCTTCCCCAACATTGGCAGCTTATG...AGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGGGGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CAA 90 bp CCCCAGACCTCAAATGGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCCTGTCCCACAAAGTCTTCCACTaGGCATTTTCGAGAAGAACC +
Preference number: 5 (lower is better)
Translates to: PQTSNGLTRFSSPAVFLSHKVFH*AFSRRT
Trigger: GGTTCTTCTCGAAAATGCCAAGTGGAAGACTTTGTG...GGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS GCA 90 bp TACTGTTTCGGGGGAGGGCAGAGCCTTGAGTGTGGCTGCATCATCTaGCACATACTTACCATGTTACTGCAACAAGCTATTTTGGCATCC +
Preference number: 5 (lower is better)
Translates to: YCFGGGQSLECGCII*HILTMLLQQAILAS
Trigger: GGATGCCAAAATAGCTTGTTGCAGTAACATGGTAAGTATGTGGCAGATGATGCAGCCACACTCAAGGCTCTGCCCTCCCCCGAAACAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683881.1
CDS GCA 90 bp ATTCCCGGATACTGTTTCGGGGGAGGGCAGAGCCTTGAGTGTGGCTaGATCATCTGCCACATACTTACCATGTTACTGCAACAAGCTATT +
Preference number: 5 (lower is better)
Translates to: IPGYCFGGGQSLECG*IICHILTMLLQQAI
Trigger: AATAGCTTGTTGCAGTAACATGGTAAGTATGTGGCAGATGATGCAGCCACACTCAAGGCTCTGCCCTCCCCCGAAACAGTATCCGGGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683881.1
CDS CCA 90 bp GGAGAAGAGGGTGATATAGTAGATTCGGTGCTTGGTCTTCATTCTTaGGATGAGGGCAGGACCCCGGATATTATACTTGACCGACGCACA +
Preference number: 5 (lower is better)
Translates to: GEEGDIVDSVLGLHS*DEGRTPDIILDRRT
Trigger: TGTGCGTCGGTCAAGTATAATATCCGGGGTCCTGCCCTCATCCCAAGAATGAAGACCAAGCACCGAATCTACTATATCACCCTCTTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000343631.4
ENST00000358681.8
ENST00000395673.8
ENST00000531161.6
ENST00000533608.7
ENST00000682359.1
ENST00000682815.1
ENST00000682947.1
ENST00000682993.1
ENST00000683000.1
ENST00000683299.1
ENST00000683870.1
ENST00000683881.1
ENST00000684039.1
ENST00000684124.1
ENST00000684533.1
CDS CCA 90 bp TTGGTGCATTTATCGAGTACTAACACTGACTCTCCATGTTTGACCTaGAGGGCTTCTAGGTCCTCTCTGTACTCAGGATGGAGACCCACC +
Preference number: 5 (lower is better)
Translates to: LVHLSSTNTDSPCLT*RASRSSLYSGWRPT
Trigger: GGTGGGTCTCCATCCTGAGTACAGAGAGGACCTAGAAGCCCTCCAGGTCAAACATGGAGAGTCAGTGTTAGTACTCGATAAATGCACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000343631.4
ENST00000358681.8
ENST00000395673.8
ENST00000531161.6
ENST00000533608.7
ENST00000682359.1
ENST00000682815.1
ENST00000682947.1
ENST00000682993.1
ENST00000683000.1
ENST00000683299.1
ENST00000683870.1
ENST00000683881.1
ENST00000684039.1
ENST00000684124.1
CDS CCA 90 bp CACAGCAGGAGGGTCATTCCATTCTTCATAGGAGATGGCAGCATATaGATAGATCCGGTCATTGATAATCTGCAGGGTGGCCAGGGCAAT +
Preference number: 5 (lower is better)
Translates to: HSRRVIPFFIGDGSI*IDPVIDNLQGGQGN
Trigger: ATTGCCCTGGCCACCCTGCAGATTATCAATGACCGGATCTATCCATATGCTGCCATCTCCTATGAAGAATGGAATGACCCTCCTGCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000343631.4
ENST00000395673.8
ENST00000525559.1
ENST00000533608.7
ENST00000534048.1
ENST00000682359.1
ENST00000682711.1
ENST00000682815.1
ENST00000682947.1
ENST00000682993.1
ENST00000683000.1
ENST00000683299.1
ENST00000683870.1
ENST00000683881.1
ENST00000684039.1
ENST00000684124.1
ENST00000684533.1
CDS-3UTR CAA 90 bp CTTCTCTTCTCCAGCAGTCTTCCTGTCCGTGAAGTTTCCTTCCAGATTGTTACAGCTTGTGCTGTCTCCTaGATGCGCAGTGTGTTCTGG +
Preference number: 5 (lower is better)
Translates to: LLFSSSLPVREVSFQIVTACAVS*MRSVFW
Trigger: CCAGAACACACTGCGCATCAAGGAGACAGCACAAGC...TGTAACAATCTGGAAGGAAACTTCACGGACAGGAAGACTGCTGGAGAAGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CAA 90 bp CATGCCACAAAGTCTTCCACTTGGCATTTTCGAGAAGAACCCATCAGAGATCATTCGAAGACCTGGTGCTaGTGGCAGCGCTTACGGACA +
Preference number: 5 (lower is better)
Translates to: HATKSSTWHFREEPIRDHSKTWC*WQRLRT
Trigger: TGTCCGTAAGCGCTGCCACAAGCACCAGGTCTTCGA...ATGATCTCTGATGGGTTCTTCTCGAAAATGCCAAGTGGAAGACTTTGTGGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CAA 90 bp GCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCGATAGACTGGGCACCTaGGACACTTCAGTGATGACC +
Preference number: 5 (lower is better)
Translates to: ALQVPRHLSNPTKMFGFCDRLGT*DTSVMT
Trigger: GGTCATCACTGAAGTGTCCAAGGTGCCCAGTCTATC...GCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CAA 90 bp AGGTGGGTGCATGCCAAGATCCAAGTAGGTCAACCTTCCACCCTTAACCTACTAGACCTCATAACCAAATaGCAGCTCGTCAGAGGTCAG +
Preference number: 5 (lower is better)
Translates to: RWVHAKIQVGQPSTLNLLDLITK*QLVRGQ
Trigger: CTGACCTCTGACGAGCTGCAATTTGGTTATGAGGTC...TAGTAGGTTAAGGGTGGAAGGTTGACCTACTTGGATCTTGGCATGCACCCACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CAA 90 bp GATTCCCCAGACCTCAAATGGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCCTGCATCTACCCAGTTCTaGATATCCCCAGGCATTTTG +
Preference number: 5 (lower is better)
Translates to: DSPDLKWANTLLFSSSLPASTQF*ISPGIL
Trigger: CAAAATGCCTGGGGATATCAAGAACTGGGTAGATGC...AGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGGGGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CAA 90 bp TGCTCTTCCTGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCACTGAAGCAAACTTGTaGATGCACTCTGACCTCTCC +
Preference number: 5 (lower is better)
Translates to: CSSCAQAQHSRSQGIYQITEANL*MHSDLS
Trigger: GGAGAGGTCAGAGTGCATCAACAAGTTTGCTTCAGT...GATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGGAAGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CAA 90 bp GATTCCCCAGACCTCAAATGGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCCTGAGAAAGGTGGTTCCTaGGACTATCAGGAATTGGTG +
Preference number: 5 (lower is better)
Translates to: DSPDLKWANTLLFSSSLPEKGGS*DYQELV
Trigger: CACCAATTCCTGATAGTCCAAGGAACCACCTTTCTC...AGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGGGGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CAA 90 bp GTCAACCTTCCACCCTTAACCTACTACTCTGACATCAGAGTGCTGGGAGGCCTTAGAATGAGAGAAATTTaGGCATCCCCTTGGGATGGG +
Preference number: 5 (lower is better)
Translates to: VNLPPLTYYSDIRVLGGLRMREI*ASPWDG
Trigger: CCCATCCCAAGGGGATGCCAAAATTTCTCTCATTCT...AAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAGGGTGGAAGGTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CAA 90 bp CATTCCTCCTGGCGTGTGTTCCCAGACATGGGCAGAAGACTGTTGTCAGGCCAAACATCACCTTTGAGGTaGTTTCAAGTGCCTAGGATA +
Preference number: 5 (lower is better)
Translates to: HSSWRVFPDMGRRLLSGQTSPLR*FQVPRI
Trigger: TATCCTAGGCACTTGAAACAACCTCAAAGGTGATGT...TTGGCCTGACAACAGTCTTCTGCCCATGTCTGGGAACACACGCCAGGAGGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CAA 90 bp GGGTATCAGACATTCCTCCTGGCGTGTGTTCCCAGACATGGGCAGAAGACTGTTAGGGTAACATCACCTTaGAGGTTGTTTCAAGTGCCT +
Preference number: 5 (lower is better)
Translates to: GYQTFLLACVPRHGQKTVRVTSP*RLFQVP
Trigger: AGGCACTTGAAACAACCTCAAAGGTGATGTTACCCT...AACAGTCTTCTGCCCATGTCTGGGAACACACGCCAGGAGGAATGTCTGATACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CAA 90 bp CATTCCTCCTGGCGTGTGTTCCCAGACATGGGCAGAAGACTGTTGTCAGGCCAAGTCAGAGCTTTGAACTaGATGACACTGAGTAAAGGA +
Preference number: 5 (lower is better)
Translates to: HSSWRVFPDMGRRLLSGQVRALN*MTLSKG
Trigger: TCCTTTACTCAGTGTCATCAAGTTCAAAGCTCTGAC...TTGGCCTGACAACAGTCTTCTGCCCATGTCTGGGAACACACGCCAGGAGGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS TCA 90 bp TCTACATTCCAGTCATTTGAGGACTCGATAGAATGGGGCCAAAACTaGAACATGCCAGTGGCAATGAGGCCCAGGAGGACAATGGAGAAG +
Preference number: 5 (lower is better)
Translates to: STFQSFEDSIEWGQN*NMPVAMRPRRTMEK
Trigger: CTTCTCCATTGTCCTCCTGGGCCTCATTGCCACTGGCATGTTTCAGTTTTGGCCCCATTCTATCGAGTCCTCAAATGACTGGAATGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000343631.4
ENST00000358681.8
ENST00000395673.8
ENST00000531161.6
ENST00000533608.7
ENST00000682359.1
ENST00000682815.1
ENST00000682947.1
ENST00000682993.1
ENST00000683000.1
ENST00000683299.1
ENST00000683870.1
ENST00000683881.1
ENST00000684039.1
ENST00000684124.1
ENST00000684533.1
CDS TCA 90 bp AGAGGTTGGTGCATTTATCGAGTACTAACACTGACTCTCCATGTTTaGCCTGGAGGGCTTCTAGGTCCTCTCTGTACTCAGGATGGAGAC +
Preference number: 5 (lower is better)
Translates to: RGWCIYRVLTLTLHV*PGGLLGPLCTQDGD
Trigger: GTCTCCATCCTGAGTACAGAGAGGACCTAGAAGCCCTCCAGGTCAAACATGGAGAGTCAGTGTTAGTACTCGATAAATGCACCAACCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000343631.4
ENST00000358681.8
ENST00000395673.8
ENST00000531161.6
ENST00000533608.7
ENST00000682359.1
ENST00000682815.1
ENST00000682947.1
ENST00000682993.1
ENST00000683000.1
ENST00000683299.1
ENST00000683870.1
ENST00000683881.1
ENST00000684039.1
ENST00000684124.1
CDS CCA 90 bp CCTAAGGCAGGAAATAGAGATCAGAGGCTAAGGCGCACTTTTGGTTaGAGGCTCACTTACCTCTCCACCATGTGTGTTTGGTCTAGTGAA +
Preference number: 5 (lower is better)
Translates to: PKAGNRDQRLRRTFG*RLTYLSTMCVWSSE
Trigger: TTCACTAGACCAAACACACATGGTGGAGAGGTAAGTGAGCCTCCAACCAAAAGTGCGCCTTAGCCTCTGATCTCTATTTCCTGCCTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683204.1
CDS-3UTR CAA 90 bp AGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGACTGACTCTCCATGTTaGACCTGGAGGGCTTCTAGG +
Preference number: 5 (lower is better)
Translates to: STPGPKAFIKSHQDVWLLTDSPC*TWRASR
Trigger: CCTAGAAGCCCTCCAGGTCAAACATGGAGAGTCAGT...CAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CAA 90 bp ATGGTGGCAAGGCCTGACTGGTGGCTTTGGTCTAAGACATATGGATCCCTCCTCTTCTTCAATCTGTCTTaGGGGGATGCTCTGCAAAAT +
Preference number: 5 (lower is better)
Translates to: MVARPDWWLWSKTYGSLLFFNLS*GDALQN
Trigger: ATTTTGCAGAGCATCCCCCAAAGACAGATTGAAGAA...GAGGAGGGATCCATATGTCTTAGACCAAAGCCACCAGTCAGGCCTTGCCACCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CAA 90 bp TCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGCAGACGACAAGTAGTTaGGATAGACTGGGCACCTTG +
Preference number: 5 (lower is better)
Translates to: SRSQGIYQIPPRCLAFAPQTTSS*DRLGTL
Trigger: CAAGGTGCCCAGTCTATCCAAACTACTTGTCGTCTG...CGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CAA 90 bp GTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGAATTCGCTTTTCCCGTGACGTaGGCCACCAGGAAGTTCATG +
Preference number: 5 (lower is better)
Translates to: VPRHLSNPTKMFGFCTEFAFPVT*ATRKFM
Trigger: CATGAACTTCCTGGTGGCCAACGTCACGGGAAAAGC...GAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CAA 90 bp GTCAACCTTCCACCCTTAACCTACTACTCTGACATCAGAGTGCTGGGAGGCCTTAAGACTGAAGCAAACTaGTTGATGCACTCTGACCTC +
Preference number: 5 (lower is better)
Translates to: VNLPPLTYYSDIRVLGGLKTEAN*LMHSDL
Trigger: GAGGTCAGAGTGCATCAACAAGTTTGCTTCAGTCTT...AAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAGGGTGGAAGGTTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CAA 90 bp TGCTCTTCCTGTGCACAAGCCCAGCACTCCAGGTCCCAAGGCATTTATCAAATCTCTAGGTTCTTGTTCTaGAGAAAGTGGGTTAGGTGG +
Preference number: 5 (lower is better)
Translates to: CSSCAQAQHSRSQGIYQISRFLF*RKWVRW
Trigger: CCACCTAACCCACTTTCTCAAGAACAAGAACCTAGA...GATTTGATAAATGCCTTGGGACCTGGAGTGCTGGGCTTGTGCACAGGAAGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CAA 90 bp CTTCTCTTCTCCAGCAGTCTTCCTGTCCGTGAAGTTTCCTTCCAGATTGTTACAGAAGTAGATGAGGCTTaGGCAGAGAAACCAGGGTGG +
Preference number: 5 (lower is better)
Translates to: LLFSSSLPVREVSFQIVTEVDEA*AEKPGW
Trigger: CCACCCTGGTTTCTCTGCCAAAGCCTCATCTACTTC...TGTAACAATCTGGAAGGAAACTTCACGGACAGGAAGACTGCTGGAGAAGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CAA 90 bp GTCAACCTTCCACCCTTAACCTACTACTCTGACATCAGAGTGCTGGGAGGCCTTAGTGGAAAGCTCAAGTaGCTTTCAAAGTCTCTCTGG +
Preference number: 5 (lower is better)
Translates to: VNLPPLTYYSDIRVLGGLSGKLK*LSKSLW
Trigger: CCAGAGAGACTTTGAAAGCAACTTGAGCTTTCCACT...AAGGCCTCCCAGCACTCTGATGTCAGAGTAGTAGGTTAAGGGTGGAAGGTTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS TCA 90 bp AGGATATGGGGAAATCGAAACCCTCATACATGGCTGGTGGGAATGTaGAATGGTGCAGCCGCTTTGGAAAAGAGTTTGGCAGTTCCTCAA +
Preference number: 5 (lower is better)
Translates to: RIWGNRNPHTWLVGM*NGAAALEKSLAVPQ
Trigger: TTGAGGAACTGCCAAACTCTTTTCCAAAGCGGCTGCACCATTTCACATTCCCACCAGCCATGTATGAGGGTTTCGATTTCCCCATATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529186.1
CDS TCA 90 bp TGTAGACCACATTTTAAGATCCTTACCAAACAAGCCTCTCCTATATaGTTCCCGGATACTGTTTCGGGGGAGGGCAGAGCCTTGAGTGTG +
Preference number: 5 (lower is better)
Translates to: CRPHFKILTKQASPI*FPDTVSGEGRALSV
Trigger: CACACTCAAGGCTCTGCCCTCCCCCGAAACAGTATCCGGGAATCATATAGGAGAGGCTTGTTTGGTAAGGATCTTAAAATGTGGTCTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683881.1
CDS GCA 90 bp ACTTCATGCCATTCCCTAGGGCAGAGCCAGTGTGTTTGGACCCTATaGCCTTTTCAGTTTCCTAGGGTTGCTGTTAACAAAGAACCACAA +
Preference number: 5 (lower is better)
Translates to: TSCHSLGQSQCVWTL*PFQFPRVAVNKEPQ
Trigger: TTGTGGTTCTTTGTTAACAGCAACCCTAGGAAACTGAAAAGGGCATAGGGTCCAAACACACTGGCTCTGCCCTAGGGAATGGCATGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684437.1
CDS CCA 90 bp AGAAAGGACACTTCATGCCATTCCCTAGGGCAGAGCCAGTGTGTTTaGACCCTATGCCCTTTTCAGTTTCCTAGGGTTGCTGTTAACAAA +
Preference number: 5 (lower is better)
Translates to: RKDTSCHSLGQSQCV*TLCPFQFPRVAVNK
Trigger: TTTGTTAACAGCAACCCTAGGAAACTGAAAAGGGCATAGGGTCCAAACACACTGGCTCTGCCCTAGGGAATGGCATGAAGTGTCCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684437.1
CDS-3UTR CAA 90 bp AGTACACATTACCCAAATCAAAAGTATTTGGTAAGCACCTGTGTTTGCTGCTGTGGGAGGAAGAGTGGATaGCTCACGCTGCCCCACTTC +
Preference number: 5 (lower is better)
Translates to: STHYPNQKYLVSTCVCCCGRKSG*LTLPHF
Trigger: GAAGTGGGGCAGCGTGAGCAATCCACTCTTCCTCCC...ACAGCAGCAAACACAGGTGCTTACCAAATACTTTTGATTTGGGTAATGTGTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CAA 90 bp GGATTTAAATCTGGAGCATGCCACAAAGTCTTCCACTTGGCATTTTCGAGAAGATATGGCGGTGAACCCTaGAGACTGTGGTGGGATCAG +
Preference number: 5 (lower is better)
Translates to: GFKSGACHKVFHLAFSRRYGGEP*RLWWDQ
Trigger: CTGATCCCACCACAGTCTCAAGGGTTCACCGCCATA...TCTTCTCGAAAATGCCAAGTGGAAGACTTTGTGGCATGCTCCAGATTTAAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CAA 90 bp ATGGTGGCAAGGCCTGACTGGTGGCTTTGGTCTAAGACATATGGATCCCTCCTCAAACGGTTACTTAACTaGTTTTCAGCAGTCCTCACA +
Preference number: 5 (lower is better)
Translates to: MVARPDWWLWSKTYGSLLKRLLN*FSAVLT
Trigger: TGTGAGGACTGCTGAAAACAAGTTAAGTAACCGTTT...GAGGAGGGATCCATATGTCTTAGACCAAAGCCACCAGTCAGGCCTTGCCACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CAA 90 bp GCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCTTTCGTGGGGTTACCTaGATAACTGCTTTTCCCGTG +
Preference number: 5 (lower is better)
Translates to: ALQVPRHLSNPTKMFGFCFRGVT*ITAFPV
Trigger: CACGGGAAAAGCAGTTATCAAGGTAACCCCACGAAA...GCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CAA 90 bp GCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCGTGCACTCAGGACACTaGAATTTCTTTCGTGGGGTT +
Preference number: 5 (lower is better)
Translates to: ALQVPRHLSNPTKMFGFCVHSGH*NFFRGV
Trigger: AACCCCACGAAAGAAATTCAAGTGTCCTGAGTGCAC...GCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CAA 90 bp ATGATTCCCCAGACCTCAAATGGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCCATAGCTCGAGGTGCTaGGATATTCATTCTAGGTTC +
Preference number: 5 (lower is better)
Translates to: MIPQTSNGLTRFSSPAVFHSSRC*DIHSRF
Trigger: GAACCTAGAATGAATATCCAAGCACCTCGAGCTATG...GAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGGGGAATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CAA 90 bp ATGATTCCCCAGACCTCAAATGGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCCAAGATGTTTGGCTTTaGCACCGAATTCTGGGTTTG +
Preference number: 5 (lower is better)
Translates to: MIPQTSNGLTRFSSPAVFQDVWL*HRILGL
Trigger: CAAACCCAGAATTCGGTGCAAAAGCCAAACATCTTG...GAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGGGGAATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CAA 90 bp TCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGAGGGTGGTCAGAGCTTaGAACTTGATGACACTGAGT +
Preference number: 5 (lower is better)
Translates to: SRSQGIYQIPPRCLAFAPRVVRA*NLMTLS
Trigger: ACTCAGTGTCATCAAGTTCAAAGCTCTGACCACCCT...CGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CAA 90 bp GGGTATCAGACATTCCTCCTGGCGTGTGTTCCCAGACATGGGCAGAAGACTGTTTTATTAGCAACATCTTaGGCCAATGAGAGCAAAGAG +
Preference number: 5 (lower is better)
Translates to: GYQTFLLACVPRHGQKTVLLATS*ANESKE
Trigger: CTCTTTGCTCTCATTGGCCAAAGATGTTGCTAATAA...AACAGTCTTCTGCCCATGTCTGGGAACACACGCCAGGAGGAATGTCTGATACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS CCA 90 bp GCCCAAGGTGTGAAACAATGTCGTGTCCTGCTCATAATGGTCTCATaGGATACTTTTATTGTGCTGTTAAGGCCTGTGTTTGCTGCTGTC +
Preference number: 5 (lower is better)
Translates to: AQGVKQCRVLLIMVS*DTFIVLLRPVFAAV
Trigger: GACAGCAGCAAACACAGGCCTTAACAGCACAATAAAAGTATCCCATGAGACCATTATGAGCAGGACACGACATTGTTTCACACCTTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682993.1
CDS CCA 90 bp ACCGACGCACACATAATGACACAGACAGCCTCTTCCTCACACTCCTaGTCACCAGGGAGAGAAATAAGAAAAACCAAGTATTTAGGATGG +
Preference number: 5 (lower is better)
Translates to: TDAHIMTQTASSSHS*SPGREIRKTKYLGW
Trigger: CCATCCTAAATACTTGGTTTTTCTTATTTCTCTCCCTGGTGACCAGGAGTGTGAGGAAGAGGCTGTCTGTGTCATTATGTGTGCGTCGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683299.1
CDS-3UTR CAA 90 bp AGCATGCCACAAAGTCTTCCACTTGGCATTTTCGAGAAGAACCCATCAGAGATCCCCCGGATATTATACTaGACCGACGCACACATAATG +
Preference number: 5 (lower is better)
Translates to: SMPQSLPLGIFEKNPSEIPRILY*TDAHIM
Trigger: CATTATGTGTGCGTCGGTCAAGTATAATATCCGGGG...GATCTCTGATGGGTTCTTCTCGAAAATGCCAAGTGGAAGACTTTGTGGCATGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CAA 90 bp CACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCCCGGATATTATACTaGACCGACGCACACATAATG +
Preference number: 5 (lower is better)
Translates to: HSRSQGIYQIPPRCLAFAPRILY*TDAHIM
Trigger: CATTATGTGTGCGTCGGTCAAGTATAATATCCGGGG...TGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CAA 90 bp CATGCCACAAAGTCTTCCACTTGGCATTTTCGAGAAGAACCCATCAGAGATCATCAGACGACAAGTAGTTaGGATAGACTGGGCACCTTG +
Preference number: 5 (lower is better)
Translates to: HATKSSTWHFREEPIRDHQTTSS*DRLGTL
Trigger: CAAGGTGCCCAGTCTATCCAAACTACTTGTCGTCTG...ATGATCTCTGATGGGTTCTTCTCGAAAATGCCAAGTGGAAGACTTTGTGGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CAA 90 bp CGCTTCTCTTCTCCAGCAGTCTTCCTGTCCGTGAAGTTTCCTTCCAGATTGTTACAAGATGTTTGGCTTTaGCACCGAATTCTGGGTTTG +
Preference number: 5 (lower is better)
Translates to: RFSSPAVFLSVKFPSRLLQDVWL*HRILGL
Trigger: CAAACCCAGAATTCGGTGCAAAAGCCAAACATCTTG...TAACAATCTGGAAGGAAACTTCACGGACAGGAAGACTGCTGGAGAAGAGAAGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CAA 90 bp TCAAATGGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCCTGTCCGTGAAGTTTTTTTGGGGACATATGTaGTGGCTAAAGCCCAAACTG +
Preference number: 5 (lower is better)
Translates to: SNGLTRFSSPAVFLSVKFFWGHM*WLKPKL
Trigger: CAGTTTGGGCTTTAGCCACAACATATGTCCCCAAAA...AAACTTCACGGACAGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGA
47% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CAA 90 bp GATTCCCCAGACCTCAAATGGGCTAACACGCTTCTCTTCTCCAGCAGTCTTCCTCCAAATCAAAAGTATTaGGTAAGCACCTGTGTTTGC +
Preference number: 5 (lower is better)
Translates to: DSPDLKWANTLLFSSSLPPNQKY*VSTCVC
Trigger: GCAAACACAGGTGCTTACCAAATACTTTTGATTTGG...AGGAAGACTGCTGGAGAAGAGAAGCGTGTTAGCCCATTTGAGGTCTGGGGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS TCA 90 bp TCCAGTCAAGAACTTCAGAGAAAGGCAAAATATAGGAGTCTGCAATaGCAACCGGGACACAGCCAGCTTGTAACACATCGCTCAATACTG +
Preference number: 5 (lower is better)
Translates to: SSQELQRKAKYRSLQ*QPGHSQLVTHRSIL
Trigger: CAGTATTGAGCGATGTGTTACAAGCTGGCTGTGTCCCGGTTGTCATTGCAGACTCCTATATTTTGCCTTTCTCTGAAGTTCTTGACTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000343631.4
ENST00000358681.8
ENST00000395673.8
ENST00000531161.6
ENST00000533608.7
ENST00000682815.1
ENST00000682947.1
ENST00000682993.1
ENST00000683000.1
ENST00000683299.1
ENST00000683870.1
ENST00000683881.1
ENST00000684039.1
ENST00000684124.1
CDS TCA 90 bp GCAAATGTTCCAGAAGAGAGGGAAGGATTCCCGAATTACAAAGGATaGCTGAACTGGGAAGCTGGGCTAGTTTGTGCAGCAATAGTATCA +
Preference number: 5 (lower is better)
Translates to: ANVPEEREGFPNYKG*LNWEAGLVCAAIVS
Trigger: TGATACTATTGCTGCACAAACTAGCCCAGCTTCCCAGTTCAGTCATCCTTTGTAATTCGGGAATCCTTCCCTCTCTTCTGGAACATTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531161.6
CDS GCA 90 bp CCCGAATTACAAAGGATGACTGAACTGGGAAGCTGGGCTAGTTTGTaGAGCAATAGTATCATGGTCAATAGCTACACAGAAGTATTGCCC +
Preference number: 5 (lower is better)
Translates to: PELQRMTELGSWASL*SNSIMVNSYTEVLP
Trigger: GGGCAATACTTCTGTGTAGCTATTGACCATGATACTATTGCTGCACAAACTAGCCCAGCTTCCCAGTTCAGTCATCCTTTGTAATTCGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531161.6
CDS CCA 90 bp ACATTCAGACCTCCACCAATGACACGTTTCATAAGCTGCCAATGTTaGGGAAGCTCTTCAGCTTCTCAGGAAAGTCATCTTTGTACAGGA +
Preference number: 5 (lower is better)
Translates to: TFRPPPMTRFISCQC*GSSSASQESHLCTG
Trigger: TCCTGTACAAAGATGACTTTCCTGAGAAGCTGAAGAGCTTCCCCAACATTGGCAGCTTATGAAACGTGTCATTGGTGGAGGTCTGAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000343631.4
ENST00000358681.8
ENST00000395673.8
ENST00000533608.7
ENST00000682359.1
ENST00000682711.1
ENST00000682815.1
ENST00000682947.1
ENST00000682993.1
ENST00000683000.1
ENST00000683299.1
ENST00000683870.1
ENST00000683881.1
ENST00000684039.1
ENST00000684124.1
ENST00000684437.1
ENST00000684533.1
CDS CCA 90 bp GAGGGAAGGATTCCCGAATTACAAAGGATGACTGAACTGGGAAGCTaGGCTAGTTTGTGCAGCAATAGTATCATGGTCAATAGCTACACA +
Preference number: 5 (lower is better)
Translates to: EGRIPELQRMTELGS*ASLCSNSIMVNSYT
Trigger: TGTGTAGCTATTGACCATGATACTATTGCTGCACAAACTAGCCCAGCTTCCCAGTTCAGTCATCCTTTGTAATTCGGGAATCCTTCCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531161.6
CDS-3UTR CAA 90 bp CTAGAGCGACTCCTTGCATGGCTAGTACAGACCCTCTGTTTTTCTCTGACAATATCTAGGTTCTTGTTCTaGAGAAAGTGGGTTAGGTGG +
Preference number: 5 (lower is better)
Translates to: LERLLAWLVQTLCFSLTISRFLF*RKWVRW
Trigger: CCACCTAACCCACTTTCTCAAGAACAAGAACCTAGA...TATTGTCAGAGAAAAACAGAGGGTCTGTACTAGCCATGCAAGGAGTCGCTCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CAA 90 bp CACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCAATCCCACCAAGATGTTaGGCTTTTGCACCGAATTCT +
Preference number: 5 (lower is better)
Translates to: HSRSQGIYQIPPRCLAFAIPPRC*AFAPNS
Trigger: AGAATTCGGTGCAAAAGCCAAACATCTTGGTGGGAT...TGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CAA 90 bp AGGTGGGTGCATGCCAAGATCCAAGTAGGTCAACCTTCCACCCTTAACCTACTACAAAAGGGCAGAAATTaGAAGAAACCAGGGCAATAT +
Preference number: 5 (lower is better)
Translates to: RWVHAKIQVGQPSTLNLLQKGRN*KKPGQY
Trigger: ATATTGCCCTGGTTTCTTCAAATTTCTGCCCTTTTG...TAGTAGGTTAAGGGTGGAAGGTTGACCTACTTGGATCTTGGCATGCACCCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CAA 90 bp GTTCTTAAAATGGTTATGATTTGGGACCTTCTTACGCTTGATGCAGAGGGTATCCCACTGTGGCTTCTCTaGCTGCAATGGAAGAGTACC +
Preference number: 5 (lower is better)
Translates to: VLKMVMIWDLLTLDAEGIPLWLL*LQWKST
Trigger: GGTACTCTTCCATTGCAGCAAGAGAAGCCACAGTGG...GATACCCTCTGCATCAAGCGTAAGAAGGTCCCAAATCATAACCATTTTAAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CAA 90 bp TTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGAATTCTGGGTTTGGTTCGCAATTCCTGAGAGGTaGTCCACAAGATGGGGCTTT +
Preference number: 5 (lower is better)
Translates to: LSNPTKMFGFCTEFWVWFAIPER*STRWGF
Trigger: AAAGCCCCATCTTGTGGACAACCTCTCAGGAATTGC...GAACCAAACCCAGAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CAA 90 bp CTTCTCTTCTCCAGCAGTCTTCCTGTCCGTGAAGTTTCCTTCCAGATTGTTACATGCATCCTCCATACATaGGAGAAGATGGGGTTAATG +
Preference number: 5 (lower is better)
Translates to: LLFSSSLPVREVSFQIVTCILHT*EKMGLM
Trigger: CATTAACCCCATCTTCTCCAATGTATGGAGGATGCA...TGTAACAATCTGGAAGGAAACTTCACGGACAGGAAGACTGCTGGAGAAGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS TCA 90 bp AAGAGTTTGGCAGTTCCTCAAAAAGTTAAACATAGAGCTACCGTATaGCCCAGCAGTTCTGCTCCTAGGTCAAGAGAACTGAAACCAGCT +
Preference number: 5 (lower is better)
Translates to: KSLAVPQKVKHRATV*PSSSAPRSRELKPA
Trigger: AGCTGGTTTCAGTTCTCTTGACCTAGGAGCAGAACTGCTGGGTCATACGGTAGCTCTATGTTTAACTTTTTGAGGAACTGCCAAACTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529186.1
CDS TCA 90 bp GCAACTCACCTAACATTAATTTCCTATCGTTTCAGTTTGGCTAGTTaGTCTAGTGGAGGAAGTAAACCCCACTCAGGCATTCAGCTCCTG +
Preference number: 5 (lower is better)
Translates to: ATHLTLISYRFSLAS*SSGGSKPHSGIQLL
Trigger: CAGGAGCTGAATGCCTGAGTGGGGTTTACTTCCTCCACTAGATCAACTAGCCAAACTGAAACGATAGGAAATTAATGTTAGGTGAGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531161.6
CDS TCA 90 bp TGCAGCAATAGTATCATGGTCAATAGCTACACAGAAGTATTGCCCTaGAATGGTCCAGCTTCCATGGCTGTCTTAGTCACTACGACTATC +
Preference number: 5 (lower is better)
Translates to: CSNSIMVNSYTEVLP*NGPASMAVLVTTTI
Trigger: GATAGTCGTAGTGACTAAGACAGCCATGGAAGCTGGACCATTTCAGGGCAATACTTCTGTGTAGCTATTGACCATGATACTATTGCTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531161.6
CDS GCA 90 bp GCCTTGAGTGTGGCTGCATCATCTGCCACATACTTACCATGTTACTaGAACAAGCTATTTTGGCATCCTGCATGTCAAAATACCAATCCA +
Preference number: 5 (lower is better)
Translates to: ALSVAASSATYLPCY*NKLFWHPACQNTNP
Trigger: TGGATTGGTATTTTGACATGCAGGATGCCAAAATAGCTTGTTGCAGTAACATGGTAAGTATGTGGCAGATGATGCAGCCACACTCAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683881.1
CDS GCA 90 bp GTCTTTATTCCTTCCTTTCCTCATGTTCAATCCATTAGCGAGTACTaGTGGCTCTTCTTCTATCTCTTACCACCTCTAGTGCCATTCCCT +
Preference number: 5 (lower is better)
Translates to: VFIPSFPHVQSISEY*WLFFYLLPPLVPFP
Trigger: AGGGAATGGCACTAGAGGTGGTAAGAGATAGAAGAAGAGCCAGCAGTACTCGCTAATGGATTGAACATGAGGAAAGGAAGGAATAAAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684437.1
CDS-3UTR CAA 90 bp GAGCCTCAGCTGGATTTAAATCTGGAGCATGCCACAAAGTCTTCCACTTGGCATAAACGGTTACTTAACTaGTTTTCAGCAGTCCTCACA +
Preference number: 5 (lower is better)
Translates to: EPQLDLNLEHATKSSTWHKRLLN*FSAVLT
Trigger: TGTGAGGACTGCTGAAAACAAGTTAAGTAACCGTTT...ATGCCAAGTGGAAGACTTTGTGGCATGCTCCAGATTTAAATCCAGCTGAGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CAA 90 bp GGATTTAAATCTGGAGCATGCCACAAAGTCTTCCACTTGGCATTTTCGAGAAGATTTCGTGGGGTTACCTaGATAACTGCTTTTCCCGTG +
Preference number: 5 (lower is better)
Translates to: GFKSGACHKVFHLAFSRRFRGVT*ITAFPV
Trigger: CACGGGAAAAGCAGTTATCAAGGTAACCCCACGAAA...TCTTCTCGAAAATGCCAAGTGGAAGACTTTGTGGCATGCTCCAGATTTAAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CAA 90 bp GCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCACCGAATTCTGGGTTTGGTGCACTCAGGACACTaGAATTTCTTTCGTGGGGTT +
Preference number: 5 (lower is better)
Translates to: AFIKSHQDVWLLHRILGLVHSGH*NFFRGV
Trigger: AACCCCACGAAAGAAATTCAAGTGTCCTGAGTGCAC...CAAACCCAGAATTCGGTGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CAA 90 bp CAACTGTTGCAAAGCAGTTGTATAGCAGCATTTAACGTTAGCCAGAACCTCCCTCACAAAGTCTTCCACTaGGCATTTTCGAGAAGAACC +
Preference number: 5 (lower is better)
Translates to: QLLQSSCIAAFNVSQNLPHKVFH*AFSRRT
Trigger: GGTTCTTCTCGAAAATGCCAAGTGGAAGACTTTGTG...AGGGAGGTTCTGGCTAACGTTAAATGCTGCTATACAACTGCTTTGCAACAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CAA 90 bp TTCAGTCACTTGTTTTGGTTATCTTCCTCATTAGAATGTAAGCTTGACGAAAGTCATGATCTGCCCGCTTaGGCCTCCCAAAATGCTGGG +
Preference number: 5 (lower is better)
Translates to: FSHLFWLSSSLECKLDESHDLPA*ASQNAG
Trigger: CCCAGCATTTTGGGAGGCCAAAGCGGGCAGATCATG...ACTTTCGTCAAGCTTACATTCTAATGAGGAAGATAACCAAAACAAGTGACTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CAA 90 bp GGATTTAAATCTGGAGCATGCCACAAAGTCTTCCACTTGGCATTTTCGAGAAGAGACGCTGGCAGAAAGTaGAAACCTGAAAATCAGCAG +
Preference number: 5 (lower is better)
Translates to: GFKSGACHKVFHLAFSRRDAGRK*KPENQQ
Trigger: CTGCTGATTTTCAGGTTTCAACTTTCTGCCAGCGTC...TCTTCTCGAAAATGCCAAGTGGAAGACTTTGTGGCATGCTCCAGATTTAAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CAA 90 bp AAGGAAGCTAGGATCACAGGGTTATTAGCAACATCTTTGGCCAATGAGAGCAAAACAGGACAAGGTATTTaGGTGCAGGGTAGACAGAAG +
Preference number: 5 (lower is better)
Translates to: KEARITGLLATSLANESKTGQGI*VQGRQK
Trigger: CTTCTGTCTACCCTGCACCAAAATACCTTGTCCTGT...TTTGCTCTCATTGGCCAAAGATGTTGCTAATAACCCTGTGATCCTAGCTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS CCA 90 bp AACTTCCCAAGAAGCTCTCAAGGTCTATGTGTATACTTGAATCAGTaGTTCCCCAACACCAAAAGCATCTCAAGGAGAAACAGCAACTCT +
Preference number: 5 (lower is better)
Translates to: NFPRSSQGLCVYLNQ*FPNTKSISRRNSNS
Trigger: AGAGTTGCTGTTTCTCCTTGAGATGCTTTTGGTGTTGGGGAACCACTGATTCAAGTATACACATAGACCTTGAGAGCTTCTTGGGAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683000.1
CDS CCA 90 bp TTTATTCCTTCCTTTCCTCATGTTCAATCCATTAGCGAGTACTGCTaGCTCTTCTTCTATCTCTTACCACCTCTAGTGCCATTCCCTCTA +
Preference number: 5 (lower is better)
Translates to: FIPSFPHVQSISEYC*LFFYLLPPLVPFPL
Trigger: TAGAGGGAATGGCACTAGAGGTGGTAAGAGATAGAAGAAGAGCCAGCAGTACTCGCTAATGGATTGAACATGAGGAAAGGAAGGAATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684437.1
CDS-3UTR CAA 90 bp CATGCCACAAAGTCTTCCACTTGGCATTTTCGAGAAGAACCCATCAGAGATCATTTCTTCAATCTGTCTTaGGGGGATGCTCTGCAAAAT +
Preference number: 5 (lower is better)
Translates to: HATKSSTWHFREEPIRDHFFNLS*GDALQN
Trigger: ATTTTGCAGAGCATCCCCCAAAGACAGATTGAAGAA...ATGATCTCTGATGGGTTCTTCTCGAAAATGCCAAGTGGAAGACTTTGTGGCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CAA 90 bp AGGTGCTTGGATATTCATTCTAGGTTCTTGTTCTTGAGAAAGTGGGTTAGGTGGAAGACTGAAGCAAACTaGTTGATGCACTCTGACCTC +
Preference number: 5 (lower is better)
Translates to: RCLDIHSRFLFLRKWVRWKTEAN*LMHSDL
Trigger: GAGGTCAGAGTGCATCAACAAGTTTGCTTCAGTCTT...CCACCTAACCCACTTTCTCAAGAACAAGAACCTAGAATGAATATCCAAGCACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CAA 90 bp GTTCCCAGACATGGGCAGAAGACTGTTGTCAGGCCAAAGACGGAGTTAAATATAATATACCAGCAACTGTaGCAAAGCAGTTGTATAGCA +
Preference number: 5 (lower is better)
Translates to: VPRHGQKTVVRPKTELNIIYQQL*QSSCIA
Trigger: TGCTATACAACTGCTTTGCAACAGTTGCTGGTATAT...TATATTTAACTCCGTCTTTGGCCTGACAACAGTCTTCTGCCCATGTCTGGGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CAA 90 bp CATGCCACAAAGTCTTCCACTTGGCATTTTCGAGAAGAACCCATCAGAGATCATTGCTATATCCCTGTCTaGAATTTCTACGGTGACTGT +
Preference number: 5 (lower is better)
Translates to: HATKSSTWHFREEPIRDHCYIPV*NFYGDC
Trigger: ACAGTCACCGTAGAAATTCAAGACAGGGATATAGCA...ATGATCTCTGATGGGTTCTTCTCGAAAATGCCAAGTGGAAGACTTTGTGGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS TCA 90 bp CATGTTAGAACTTCCCAAGAAGCTCTCAAGGTCTATGTGTATACTTaGATCAGTGGTTCCCCAACACCAAAAGCATCTCAAGGAGAAACA +
Preference number: 5 (lower is better)
Translates to: HVRTSQEALKVYVYT*ISGSPTPKASQGET
Trigger: TGTTTCTCCTTGAGATGCTTTTGGTGTTGGGGAACCACTGATTCAAGTATACACATAGACCTTGAGAGCTTCTTGGGAAGTTCTAACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683000.1
CDS GCA 90 bp GAAACTGACTTGAATCGAAATAAAGAGAGTATTTCAGAGCTGTCTTaGCCCTCTGTCTGTAATATGAGGGCTTTGCTTTCGATCCTGTTC +
Preference number: 5 (lower is better)
Translates to: ETDLNRNKESISELS*PSVCNMRALLSILF
Trigger: GAACAGGATCGAAAGCAAAGCCCTCATATTACAGACAGAGGGGCAAGACAGCTCTGAAATACTCTCTTTATTTCGATTCAAGTCAGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683204.1
CDS-3UTR CAA 90 bp AGCACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGATATACACCTTGATTTaGTTCTTTGGGTTGAAGCCA +
Preference number: 5 (lower is better)
Translates to: STPGPKAFIKSHQDVWLLIYTLI*FFGLKP
Trigger: TGGCTTCAACCCAAAGAACAAAATCAAGGTGTATAT...CAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358681.8
ENST00000533608.7
CDS-3UTR CAA 90 bp AGTACACATTACCCAAATCAAAAGTATTTGGTAAGCACCTGTGTTTGCTGCTGTGCATCTACCCAGTTCTaGATATCCCCAGGCATTTTG +
Preference number: 5 (lower is better)
Translates to: STHYPNQKYLVSTCVCCCASTQF*ISPGIL
Trigger: CAAAATGCCTGGGGATATCAAGAACTGGGTAGATGC...ACAGCAGCAAACACAGGTGCTTACCAAATACTTTTGATTTGGGTAATGTGTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CAA 90 bp AGTACACATTACCCAAATCAAAAGTATTTGGTAAGCACCTGTGTTTGCTGCTGTACTGAAGCAAACTTGTaGATGCACTCTGACCTCTCC +
Preference number: 5 (lower is better)
Translates to: STHYPNQKYLVSTCVCCCTEANL*MHSDLS
Trigger: GGAGAGGTCAGAGTGCATCAACAAGTTTGCTTCAGT...ACAGCAGCAAACACAGGTGCTTACCAAATACTTTTGATTTGGGTAATGTGTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CAA 90 bp CACTCCAGGTCCCAAGGCATTTATCAAATCCCACCAAGATGTTTGGCTTTTGCATATGTATTTTGTGTTTaGGGGACATATGTTGTGGCT +
Preference number: 5 (lower is better)
Translates to: HSRSQGIYQIPPRCLAFAYVFCV*GTYVVA
Trigger: AGCCACAACATATGTCCCCAAAACACAAAATACATA...TGCAAAAGCCAAACATCTTGGTGGGATTTGATAAATGCCTTGGGACCTGGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CAA 90 bp CTAGAGCGACTCCTTGCATGGCTAGTACAGACCCTCTGTTTTTCTCTGACAATATTTCCACTTCCAACTTaGCTACTTCTGAAACTTTCT +
Preference number: 5 (lower is better)
Translates to: LERLLAWLVQTLCFSLTIFPLPT*LLLKLS
Trigger: AGAAAGTTTCAGAAGTAGCAAAGTTGGAAGTGGAAA...TATTGTCAGAGAAAAACAGAGGGTCTGTACTAGCCATGCAAGGAGTCGCTCTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS GCA 90 bp GTCATTCTCTCAATCTTCTCCATCTCAATAAATCATCCGGCCAGTTaGTCAAACCCAAAAGCTAAGACTCAGTCTTTATTCCTTCCTTTC +
Preference number: 5 (lower is better)
Translates to: VILSIFSISINHPAS*SNPKAKTQSLFLPF
Trigger: GAAAGGAAGGAATAAAGACTGAGTCTTAGCTTTTGGGTTTGAGCAACTGGCCGGATGATTTATTGAGATGGAGAAGATTGAGAGAATGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684437.1
CDS-3UTR CAA 90 bp CAACTGTTGCAAAGCAGTTGTATAGCAGCATTTAACGTTAGCCAGAACCTCCCTATATACACCTTGATTTaGTTCTTTGGGTTGAAGCCA +
Preference number: 5 (lower is better)
Translates to: QLLQSSCIAAFNVSQNLPIYTLI*FFGLKP
Trigger: TGGCTTCAACCCAAAGAACAAAATCAAGGTGTATAT...AGGGAGGTTCTGGCTAACGTTAAATGCTGCTATACAACTGCTTTGCAACAGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CAA 90 bp AGTACACATTACCCAAATCAAAAGTATTTGGTAAGCACCTGTGTTTGCTGCTGTCATAGCTCGAGGTGCTaGGATATTCATTCTAGGTTC +
Preference number: 5 (lower is better)
Translates to: STHYPNQKYLVSTCVCCCHSSRC*DIHSRF
Trigger: GAACCTAGAATGAATATCCAAGCACCTCGAGCTATG...ACAGCAGCAAACACAGGTGCTTACCAAATACTTTTGATTTGGGTAATGTGTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CAA 90 bp CATTTAACGTTAGCCAGAACCTCCCTGGCTAATGTTAAGTTTATACCAAAAGAAATCCCACCAAGATGTTaGGCTTTTGCACCGAATTCT +
Preference number: 5 (lower is better)
Translates to: HLTLARTSLANVKFIPKEIPPRC*AFAPNS
Trigger: AGAATTCGGTGCAAAAGCCAAACATCTTGGTGGGAT...TTCTTTTGGTATAAACTTAACATTAGCCAGGGAGGTTCTGGCTAACGTTAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS-3UTR CAA 90 bp CATTTAACGTTAGCCAGAACCTCCCTGGCTAATGTTAAGTTTATACCAAAAGAACAAATGTTCCTTGAGTaGATGCTTGGGTATAGTAGC +
Preference number: 5 (lower is better)
Translates to: HLTLARTSLANVKFIPKEQMFLE*MLGYSS
Trigger: GCTACTATACCCAAGCATCAACTCAAGGAACATTTG...TTCTTTTGGTATAAACTTAACATTAGCCAGGGAGGTTCTGGCTAACGTTAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533608.7
CDS TCA 90 bp CTTTACAGATGCACTGTAATTCATTCAATCCTCCTGACAACCTTATaGGGCAGGAATTATTTACAAACTAGTATTTTCATGGCTCAGAGA +
Preference number: 5 (lower is better)
Translates to: LYRCTVIHSILLTTL*GRNYLQTSIFMAQR
Trigger: TCTCTGAGCCATGAAAATACTAGTTTGTAAATAATTCCTGCCTCATAAGGTTGTCAGGAGGATTGAATGAATTACAGTGCATCTGTAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683204.1
CDS TCA 90 bp CACTTTATCCCCTCCCCTCAACTCACTAGGTTTGGTTTCTCATCATaGCCAATTTACAAAGTAAATATCAAATTTCTAGGTCCAATTATG +
Preference number: 5 (lower is better)
Translates to: HFIPSPQLTRFGFSS*PIYKVNIKFLGPIM
Trigger: CATAATTGGACCTAGAAATTTGATATTTACTTTGTAAATTGGTCATGATGAGAAACCAAACCTAGTGAGTTGAGGGGAGGGGATAAAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683204.1
CDS GCA 72 bp GCCTCCCGCTCGGCCCCGAGCTTGGTCACCGGCTCATaGCGCGGGGCGCGGGCCACCTCCGCCCAGGTCGGA +
Preference number: 6 (lower is better)
Translates to: ASRSAPSLVTGS*RGARATSAQVG
Trigger: TCCGACCTGGGCGGAGGTGGCCCGCGCCCCGCGGCATGAGCCGGTGACCAAGCTCGGGGCCGAGCGGGAGGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000358681.8
ENST00000395673.8
ENST00000531161.6
ENST00000533608.7
ENST00000682359.1
ENST00000682815.1
ENST00000682993.1
ENST00000683000.1
ENST00000683870.1
ENST00000684039.1
ENST00000684124.1
ENST00000684533.1
CDS CCA 72 bp CCTCGGCCACGGCTGCCTCCCGCTCGGCCCCGAGCTTaGTCACCGGCTCATGCCGCGGGGCGCGGGCCACCT +
Preference number: 6 (lower is better)
Translates to: PRPRLPPARPRA*SPAHAAGRGPP
Trigger: AGGTGGCCCGCGCCCCGCGGCATGAGCCGGTGACCAAGCTCGGGGCCGAGCGGGAGGCAGCCGTGGCCGAGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000358681.8
ENST00000531161.6
ENST00000533608.7
ENST00000682359.1
ENST00000682815.1
ENST00000682993.1
ENST00000683870.1
ENST00000684039.1
ENST00000684124.1
ENST00000684533.1
CDS CAA 72 bp TCCTCGGCCACGGCTGCCTCCCGCTCGGCCCCGAGCTaGGTCACCGGCTCATGCCGCGGGGCGCGGGCCACC +
Preference number: 6 (lower is better)
Translates to: SSATAASRSAPS*VTGSCRGARAT
Trigger: GGTGGCCCGCGCCCCGCGGCATGAGCCGGTGACCAAGCTCGGGGCCGAGCGGGAGGCAGCCGTGGCCGAGGA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000358681.8
ENST00000531161.6
ENST00000533608.7
ENST00000682359.1
ENST00000682815.1
ENST00000682993.1
ENST00000683870.1
ENST00000684039.1
ENST00000684124.1
ENST00000684533.1
CDS CAA 72 bp CTCTCGGCCACGGCTGCCTCCCGCTCGGCCCCGAGCTaGGTCACCGGCTCATGCCGCGGGGCGCGGGCCACC +
Preference number: 6 (lower is better)
Translates to: LSATAASRSAPS*VTGSCRGARAT
Trigger: GGTGGCCCGCGCCCCGCGGCATGAGCCGGTGACCAAGCTCGGGGCCGAGCGGGAGGCAGCCGTGGCCGAGAG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395673.8
ENST00000683000.1
CDS CCA 72 bp TCTCGGCCACGGCTGCCTCCCGCTCGGCCCCGAGCTTaGTCACCGGCTCATGCCGCGGGGCGCGGGCCACCT +
Preference number: 6 (lower is better)
Translates to: SRPRLPPARPRA*SPAHAAGRGPP
Trigger: AGGTGGCCCGCGCCCCGCGGCATGAGCCGGTGACCAAGCTCGGGGCCGAGCGGGAGGCAGCCGTGGCCGAGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395673.8
ENST00000683000.1
CDS CAA 90 bp TCCTCACACTCCTCGGCCACGGCTGCCTCCCGCTCGGCCCCGAGCTaGGTCACCGGCTCATGCCGCGGGGCGCGGGCCACCTCCGCCCAG +
Preference number: 6 (lower is better)
Translates to: SSHSSATAASRSAPS*VTGSCRGARATSAQ
Trigger: CTGGGCGGAGGTGGCCCGCGCCCCGCGGCATGAGCCGGTGACCAAGCTCGGGGCCGAGCGGGAGGCAGCCGTGGCCGAGGAGTGTGAGGA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000358681.8
ENST00000531161.6
ENST00000533608.7
ENST00000682359.1
ENST00000682815.1
ENST00000682993.1
ENST00000683870.1
ENST00000684039.1
ENST00000684124.1
ENST00000684533.1
CDS GCA 72 bp GCCCAGGTCGGATCGGTCCGAATCGCCAGCCGCCACTaGCAGGGCCGAGTCTGGGCTGGCGAGCAGCGAGCG +
Preference number: 6 (lower is better)
Translates to: AQVGSVRIASRH*QGRVWAGEQRA
Trigger: CGCTCGCTGCTCGCCAGCCCAGACTCGGCCCTGGCAGTGGCGGCTGGCGATTCGGACCGATCCGACCTGGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395673.8
ENST00000533608.7
ENST00000682359.1
ENST00000682815.1
ENST00000682993.1
ENST00000683000.1
ENST00000684039.1
ENST00000684533.1
CDS CCA 72 bp AATCGCCAGCCGCCACTGCCAGGGCCGAGTCTGGGCTaGCGAGCAGCGAGCGAGGGGCCGGTAACCGGGATC +
Preference number: 6 (lower is better)
Translates to: NRQPPLPGPSLG*RAASEGPVTGI
Trigger: GATCCCGGTTACCGGCCCCTCGCTCGCTGCTCGCCAGCCCAGACTCGGCCCTGGCAGTGGCGGCTGGCGATT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395673.8
ENST00000533608.7
ENST00000682359.1
ENST00000682815.1
ENST00000682993.1
ENST00000683000.1
ENST00000684039.1
ENST00000684533.1
CDS GCA 72 bp CACTCCTCGTCCCACGGCTTCTGGCACCGCAAGGGATaGCGCAGGCCACCACCGGACCCTGAGGCGCAGGAC +
Preference number: 6 (lower is better)
Translates to: HSSSHGFWHRKG*RRPPPDPEAQD
Trigger: GTCCTGCGCCTCAGGGTCCGGTGGTGGCCTGCGGCATCCCTTGCGGTGCCAGAAGCCGTGGGACGAGGAGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343631.4
CDS TCA 72 bp GCACCGCAAGGGATGCCGCAGGCCACCACCGGACCCTaGGGCGCAGGACATCCCCCTGGGAGGAATCAGATC +
Preference number: 6 (lower is better)
Translates to: APQGMPQATTGP*GAGHPPGRNQI
Trigger: GATCTGATTCCTCCCAGGGGGATGTCCTGCGCCTCAGGGTCCGGTGGTGGCCTGCGGCATCCCTTGCGGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343631.4
CDS GCA 72 bp GTGGGATCAGCGGGAGGAAGAGTGGATTGCTCACGCTaGCCCACTTCAGGGTGGGAGGATTGCTCGAGGCCA +
Preference number: 6 (lower is better)
Translates to: VGSAGGRVDCSR*PTSGWEDCSRP
Trigger: TGGCCTCGAGCAATCCTCCCACCCTGAAGTGGGGCAGCGTGAGCAATCCACTCTTCCTCCCGCTGATCCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682711.1
CDS CCA 72 bp CCCTTGAGACTGTGGTGGGATCAGCGGGAGGAAGAGTaGATTGCTCACGCTGCCCCACTTCAGGGTGGGAGG +
Preference number: 6 (lower is better)
Translates to: PLRLWWDQREEE*IAHAAPLQGGR
Trigger: CCTCCCACCCTGAAGTGGGGCAGCGTGAGCAATCCACTCTTCCTCCCGCTGATCCCACCACAGTCTCAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682711.1
CDS GCA 72 bp GAGACTGTGGTGGGATCAGCGGGAGGAAGAGTGGATTaGTCACGCTGCCCCACTTCAGGGTGGGAGGATTGC +
Preference number: 6 (lower is better)
Translates to: ETVVGSAGGRVD*SRCPTSGWEDC
Trigger: GCAATCCTCCCACCCTGAAGTGGGGCAGCGTGAGCAATCCACTCTTCCTCCCGCTGATCCCACCACAGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682711.1
CDS CCA 72 bp CCCTTGAGACTGTGGTGGGATCAGCGGGAGGAAGAGTaGATTGCTCACGCTGCCCCACTTCACAGCAGGAGG +
Preference number: 6 (lower is better)
Translates to: PLRLWWDQREEE*IAHAAPLHSRR
Trigger: CCTCCTGCTGTGAAGTGGGGCAGCGTGAGCAATCCACTCTTCCTCCCGCTGATCCCACCACAGTCTCAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000343631.4
ENST00000358681.8
ENST00000395673.8
ENST00000533608.7
ENST00000534048.1
ENST00000682359.1
ENST00000682993.1
ENST00000683000.1
ENST00000683299.1
ENST00000683870.1
ENST00000683881.1
ENST00000684533.1
CDS GCA 72 bp GAGACTGTGGTGGGATCAGCGGGAGGAAGAGTGGATTaGTCACGCTGCCCCACTTCACAGCAGGAGGGTCAT +
Preference number: 6 (lower is better)
Translates to: ETVVGSAGGRVD*SRCPTSQQEGH
Trigger: ATGACCCTCCTGCTGTGAAGTGGGGCAGCGTGAGCAATCCACTCTTCCTCCCGCTGATCCCACCACAGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000343631.4
ENST00000358681.8
ENST00000395673.8
ENST00000533608.7
ENST00000534048.1
ENST00000682359.1
ENST00000682993.1
ENST00000683000.1
ENST00000683299.1
ENST00000683870.1
ENST00000683881.1
ENST00000684533.1
CDS CAA 90 bp GAGGCTCTCTACTCGGTCGTAGGTGAGGACTATGGCGGTGAACCCTaGAGACTGTGGTGGGATCAGCGGGAGGAAGAGTGGATTGCTCAC +
Preference number: 6 (lower is better)
Translates to: EALYSVVGEDYGGEP*RLWWDQREEEWIAH
Trigger: GTGAGCAATCCACTCTTCCTCCCGCTGATCCCACCACAGTCTCAAGGGTTCACCGCCATAGTCCTCACCTACGACCGAGTAGAGAGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000343631.4
ENST00000358681.8
ENST00000395673.8
ENST00000533608.7
ENST00000534048.1
ENST00000682359.1
ENST00000682711.1
ENST00000682815.1
ENST00000682993.1
ENST00000683000.1
ENST00000683299.1
ENST00000683870.1
ENST00000683881.1
ENST00000684124.1
ENST00000684533.1
CDS CCA 72 bp GGTGAGGACTATGGCGGTGAACCCTTGAGACTGTGGTaGGATCAGCGGGAGGAAGAGTGGATTGCTCACGCT +
Preference number: 6 (lower is better)
Translates to: GEDYGGEPLRLW*DQREEEWIAHA
Trigger: AGCGTGAGCAATCCACTCTTCCTCCCGCTGATCCCACCACAGTCTCAAGGGTTCACCGCCATAGTCCTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000343631.4
ENST00000358681.8
ENST00000395673.8
ENST00000533608.7
ENST00000534048.1
ENST00000682359.1
ENST00000682711.1
ENST00000682815.1
ENST00000682993.1
ENST00000683000.1
ENST00000683299.1
ENST00000683870.1
ENST00000683881.1
ENST00000684124.1
ENST00000684533.1
CDS CCA 72 bp CCCATCCCCTACCAGCTGCAGGCCCACCCTATGGTATaGCTTCCTTGCCATTCTGCATATCCCTCCTGGAGT +
Preference number: 6 (lower is better)
Translates to: PIPYQLQAHPMV*LPCHSAYPSWS
Trigger: ACTCCAGGAGGGATATGCAGAATGGCAAGGAAGCCATACCATAGGGTGGGCCTGCAGCTGGTAGGGGATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683881.1
CDS CAA 72 bp TACTCGGTCGTAGGTGAGGACTATGGCGGTGAACCCTaGAGACTGTGGTGGGATCAGCGGGAGGAAGAGTGG +
Preference number: 6 (lower is better)
Translates to: YSVVGEDYGGEP*RLWWDQREEEW
Trigger: CCACTCTTCCTCCCGCTGATCCCACCACAGTCTCAAGGGTTCACCGCCATAGTCCTCACCTACGACCGAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000343631.4
ENST00000358681.8
ENST00000395673.8
ENST00000533608.7
ENST00000534048.1
ENST00000682359.1
ENST00000682711.1
ENST00000682815.1
ENST00000682993.1
ENST00000683000.1
ENST00000683299.1
ENST00000683870.1
ENST00000683881.1
ENST00000684124.1
ENST00000684533.1
CDS TCA 72 bp TCTGGGGGACCTCCAGGCAACATGTTGAACAACAGGTaGTTCGTACCTCGATCCCACCTAGAGAGCTGGGCC +
Preference number: 6 (lower is better)
Translates to: SGGPPGNMLNNR*FVPRSHLESWA
Trigger: GGCCCAGCTCTCTAGGTGGGATCGAGGTACGAATCACCTGTTGTTCAACATGTTGCCTGGAGGTCCCCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 17 transcripts:
ENST00000343631.4
ENST00000358681.8
ENST00000395673.8
ENST00000529186.1
ENST00000531161.6
ENST00000533608.7
ENST00000682359.1
ENST00000682815.1
ENST00000682947.1
ENST00000682993.1
ENST00000683000.1
ENST00000683299.1
ENST00000683870.1
ENST00000683881.1
ENST00000684039.1
ENST00000684124.1
ENST00000684533.1
CDS GCA 72 bp GCAGAATATTCCTGCCTGCTCCCATCCCCTACCAGCTaGAGGCCCACCCTATGGTATGGCTTCCTTGCCATT +
Preference number: 6 (lower is better)
Translates to: AEYSCLLPSPTS*RPTLWYGFLAI
Trigger: AATGGCAAGGAAGCCATACCATAGGGTGGGCCTGCAGCTGGTAGGGGATGGGAGCAGGCAGGAATATTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683881.1
CDS CCA 72 bp GTAGGTGAGGACTATGGCGGTGAACCCTTGAGACTGTaGTGGGATCAGCGGGAGGAAGAGTGGATTGCTCAC +
Preference number: 6 (lower is better)
Translates to: VGEDYGGEPLRL*WDQREEEWIAH
Trigger: GTGAGCAATCCACTCTTCCTCCCGCTGATCCCACCACAGTCTCAAGGGTTCACCGCCATAGTCCTCACCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000343631.4
ENST00000358681.8
ENST00000395673.8
ENST00000533608.7
ENST00000534048.1
ENST00000682359.1
ENST00000682711.1
ENST00000682815.1
ENST00000682993.1
ENST00000683000.1
ENST00000683299.1
ENST00000683870.1
ENST00000683881.1
ENST00000684124.1
ENST00000684533.1
CDS CCA 72 bp CTTCCACCCACCCTGACAGCTGGACCATGCCTCATGTaGCTAGCACTGGAATTCACTTACCACAGCAGGAGG +
Preference number: 6 (lower is better)
Translates to: LPPTLTAGPCLM*LALEFTYHSRR
Trigger: CCTCCTGCTGTGGTAAGTGAATTCCAGTGCTAGCCACATGAGGCATGGTCCAGCTGTCAGGGTGGGTGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525559.1
CDS CAA 90 bp CCTCGATCCCACCTAGAGAGCTGGGCCATCGCTTGTGCTGTCTCCTaGATGCGCAGTGTGTTCTGGTTAAGCACATCGATGGAGGGAACA +
Preference number: 6 (lower is better)
Translates to: PRSHLESWAIACAVS*MRSVFWLSTSMEGT
Trigger: TGTTCCCTCCATCGATGTGCTTAACCAGAACACACTGCGCATCAAGGAGACAGCACAAGCGATGGCCCAGCTCTCTAGGTGGGATCGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000343631.4
ENST00000358681.8
ENST00000395673.8
ENST00000529186.1
ENST00000531161.6
ENST00000533608.7
ENST00000682359.1
ENST00000682815.1
ENST00000682947.1
ENST00000682993.1
ENST00000683000.1
ENST00000683299.1
ENST00000683870.1
ENST00000683881.1
ENST00000684039.1
ENST00000684124.1
ENST00000684533.1
CDS TCA 72 bp GATAATCTGCAGGGTGGCCAGGGCAATGGCTTTAATTaGCTGGAAGTACGCTTCCCAGAACCACCGGGCCTG +
Preference number: 6 (lower is better)
Translates to: DNLQGGQGNGFN*LEVRFPEPPGL
Trigger: CAGGCCCGGTGGTTCTGGGAAGCGTACTTCCAGTCAATTAAAGCCATTGCCCTGGCCACCCTGCAGATTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000343631.4
ENST00000395673.8
ENST00000525559.1
ENST00000533608.7
ENST00000534048.1
ENST00000682359.1
ENST00000682947.1
ENST00000682993.1
ENST00000683000.1
ENST00000683299.1
ENST00000683881.1
ENST00000684039.1
ENST00000684124.1
ENST00000684533.1
CDS TCA 72 bp GATAATCTGCAGGGTGGCCAGGGCAATGGCTTTAATTaGCTGGAAGTACGCTTCCCAGAACCACCGGGCCTC +
Preference number: 6 (lower is better)
Translates to: DNLQGGQGNGFN*LEVRFPEPPGL
Trigger: GAGGCCCGGTGGTTCTGGGAAGCGTACTTCCAGTCAATTAAAGCCATTGCCCTGGCCACCCTGCAGATTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000682711.1
ENST00000682815.1
ENST00000683870.1
CDS GCA 72 bp ACCTCGATCCCACCTAGAGAGCTGGGCCATCGCTTGTaGTGTCTCCTTGATGCGCAGTGTGTTCTGGTTAAG +
Preference number: 6 (lower is better)
Translates to: TSIPPRELGHRL*CLLDAQCVLVK
Trigger: CTTAACCAGAACACACTGCGCATCAAGGAGACAGCACAAGCGATGGCCCAGCTCTCTAGGTGGGATCGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000343631.4
ENST00000358681.8
ENST00000395673.8
ENST00000529186.1
ENST00000531161.6
ENST00000533608.7
ENST00000682359.1
ENST00000682815.1
ENST00000682947.1
ENST00000682993.1
ENST00000683000.1
ENST00000683299.1
ENST00000683870.1
ENST00000683881.1
ENST00000684039.1
ENST00000684124.1
ENST00000684533.1
CDS GCA 72 bp GAGACTGTGGTGGGATCAGCGGGAGGAAGAGTGGATTaGTCACGCTGCCCCACTTCAAGAATCTTACTGTGC +
Preference number: 6 (lower is better)
Translates to: ETVVGSAGGRVD*SRCPTSRILLC
Trigger: GCACAGTAAGATTCTTGAAGTGGGGCAGCGTGAGCAATCCACTCTTCCTCCCGCTGATCCCACCACAGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682815.1
ENST00000684124.1
CDS CCA 72 bp CCCTTGAGACTGTGGTGGGATCAGCGGGAGGAAGAGTaGATTGCTCACGCTGCCCCACTTCAAGAATCTTAC +
Preference number: 6 (lower is better)
Translates to: PLRLWWDQREEE*IAHAAPLQESY
Trigger: GTAAGATTCTTGAAGTGGGGCAGCGTGAGCAATCCACTCTTCCTCCCGCTGATCCCACCACAGTCTCAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682815.1
ENST00000684124.1
CDS TCA 72 bp GTCCTCTCTGTACTCAGGATGGAGACCCACCTGAGATaGCAGGAGGAAGTATTGCCGTGGACCTGGTCCTTT +
Preference number: 6 (lower is better)
Translates to: VLSVLRMETHLR*QEEVLPWTWSF
Trigger: AAAGGACCAGGTCCACGGCAATACTTCCTCCTGTCATCTCAGGTGGGTCTCCATCCTGAGTACAGAGAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000343631.4
ENST00000358681.8
ENST00000395673.8
ENST00000531161.6
ENST00000533608.7
ENST00000682359.1
ENST00000682815.1
ENST00000682947.1
ENST00000682993.1
ENST00000683000.1
ENST00000683299.1
ENST00000683870.1
ENST00000683881.1
ENST00000684039.1
ENST00000684124.1
CDS TCA 72 bp TCTAGGTCCTCTCTGTACTCAGGATGGAGACCCACCTaGGATGACAGGAGGAAGTATTGCCGTGGACCTGGT +
Preference number: 6 (lower is better)
Translates to: SRSSLYSGWRPT*DDRRKYCRGPG
Trigger: ACCAGGTCCACGGCAATACTTCCTCCTGTCATCTCAGGTGGGTCTCCATCCTGAGTACAGAGAGGACCTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000343631.4
ENST00000358681.8
ENST00000395673.8
ENST00000531161.6
ENST00000533608.7
ENST00000682359.1
ENST00000682815.1
ENST00000682947.1
ENST00000682993.1
ENST00000683000.1
ENST00000683299.1
ENST00000683870.1
ENST00000683881.1
ENST00000684039.1
ENST00000684124.1
CDS TCA 72 bp TGTACAGGACAGGGTCAGCTCGGTGTTCCACCACCTTaGGAGGCATGGTCCCGAAGACTGAAGCAAACTTGT +
Preference number: 6 (lower is better)
Translates to: CTGQGQLGVPPP*EAWSRRLKQTC
Trigger: ACAAGTTTGCTTCAGTCTTCGGGACCATGCCTCTCAAGGTGGTGGAACACCGAGCTGACCCTGTCCTGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000343631.4
ENST00000358681.8
ENST00000395673.8
ENST00000528159.1
ENST00000533608.7
ENST00000682359.1
ENST00000682711.1
ENST00000682815.1
ENST00000682947.1
ENST00000682993.1
ENST00000683000.1
ENST00000683299.1
ENST00000683870.1
ENST00000683881.1
ENST00000684039.1
ENST00000684124.1
ENST00000684437.1
ENST00000684533.1
CDS TCA 72 bp CTGAGCGGCATGTGCAAAGATTTGCTGACAAGACAGTaGGCCATCCAACAGGGCACCTCACAGCTTGCACAG +
Preference number: 6 (lower is better)
Translates to: LSGMCKDLLTRQ*AIQQGTSQLAQ
Trigger: CTGTGCAAGCTGTGAGGTGCCCTGTTGGATGGCTCACTGTCTTGTCAGCAAATCTTTGCACATGCCGCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682815.1
ENST00000684124.1
CDS TCA 72 bp GATTCCCGGATACTGTTTCGGGGGAGGGCAGAGCCTTaGGTGTGGCTGCATCATCTGCCACATACTTACCAT +
Preference number: 6 (lower is better)
Translates to: DSRILFRGRAEP*VWLHHLPHTYH
Trigger: ATGGTAAGTATGTGGCAGATGATGCAGCCACACTCAAGGCTCTGCCCTCCCCCGAAACAGTATCCGGGAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683881.1
CDS CCA 72 bp CCTGTCTCTGGGGACATCCAGGGCTGTGTTATAATCTaGGGGACCTCCAGGCAACATGTTGAACAACAGGTG +
Preference number: 6 (lower is better)
Translates to: PVSGDIQGCVII*GTSRQHVEQQV
Trigger: CACCTGTTGTTCAACATGTTGCCTGGAGGTCCCCCAGATTATAACACAGCCCTGGATGTCCCCAGAGACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 17 transcripts:
ENST00000343631.4
ENST00000358681.8
ENST00000395673.8
ENST00000529186.1
ENST00000531161.6
ENST00000533608.7
ENST00000682359.1
ENST00000682815.1
ENST00000682947.1
ENST00000682993.1
ENST00000683000.1
ENST00000683299.1
ENST00000683870.1
ENST00000683881.1
ENST00000684039.1
ENST00000684124.1
ENST00000684533.1
CDS CCA 72 bp ACACAGCCAGCTTGTAACACATCGCTCAATACTGCCTaGCCCAGCCGAGCTCCACGAAGAACCACACAGAAA +
Preference number: 6 (lower is better)
Translates to: TQPACNTSLNTA*PSRAPRRTTQK
Trigger: TTTCTGTGTGGTTCTTCGTGGAGCTCGGCTGGGCCAGGCAGTATTGAGCGATGTGTTACAAGCTGGCTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000343631.4
ENST00000358681.8
ENST00000395673.8
ENST00000531161.6
ENST00000533608.7
ENST00000682815.1
ENST00000682947.1
ENST00000682993.1
ENST00000683000.1
ENST00000683299.1
ENST00000683870.1
ENST00000683881.1
ENST00000684039.1
ENST00000684124.1
CDS CCA 72 bp TTTTGGGACAAATGCAGGCAAGGAGCTGCCCTCCGCTaGCCCATGTTAGAACTTCCCAAGAAGCTCTCAAGG +
Preference number: 6 (lower is better)
Translates to: FWDKCRQGAALR*PMLELPKKLSR
Trigger: CCTTGAGAGCTTCTTGGGAAGTTCTAACATGGGCCAGCGGAGGGCAGCTCCTTGCCTGCATTTGTCCCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000683000.1
ENST00000683881.1
CDS CCA 72 bp GCTTCTGGTAGCTGGCTGTCAATCTCTGGCATTGCCTaGCTTGTAGATGCCTCACTCCAACCCTCCATCTTC +
Preference number: 6 (lower is better)
Translates to: ASGSWLSISGIA*LVDASLQPSIF
Trigger: GAAGATGGAGGGTTGGAGTGAGGCATCTACAAGCCAGGCAATGCCAGAGATTGACAGCCAGCTACCAGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684437.1
CDS CAA 72 bp CACCTAGAGAGCTGGGCCATCGCTTGTGCTGTCTCCTaGATGCGCAGTGTGTTCTGGTTAAGCACATCGATG +
Preference number: 6 (lower is better)
Translates to: HLESWAIACAVS*MRSVFWLSTSM
Trigger: CATCGATGTGCTTAACCAGAACACACTGCGCATCAAGGAGACAGCACAAGCGATGGCCCAGCTCTCTAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000343631.4
ENST00000358681.8
ENST00000395673.8
ENST00000529186.1
ENST00000531161.6
ENST00000533608.7
ENST00000682359.1
ENST00000682815.1
ENST00000682947.1
ENST00000682993.1
ENST00000683000.1
ENST00000683299.1
ENST00000683870.1
ENST00000683881.1
ENST00000684039.1
ENST00000684124.1
ENST00000684533.1
CDS CAA 72 bp CAGTGGACTATAGACAGGAATGCTGACATCGTAGCCTaGCCGGTAAGTCCACGTAGAAAAGCCGCCACCAGC +
Preference number: 6 (lower is better)
Translates to: QWTIDRNADIVA*PVSPRRKAATS
Trigger: GCTGGTGGCGGCTTTTCTACGTGGACTTACCGGCAAGGCTACGATGTCAGCATTCCTGTCTATAGTCCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000343631.4
ENST00000358681.8
ENST00000395673.8
ENST00000529186.1
ENST00000531161.6
ENST00000533608.7
ENST00000682359.1
ENST00000682815.1
ENST00000682947.1
ENST00000682993.1
ENST00000683000.1
ENST00000683299.1
ENST00000683870.1
ENST00000683881.1
ENST00000684039.1
ENST00000684124.1
ENST00000684533.1
CDS CAA 72 bp CTACCAGCTGCAGGCCCACCCTATGGTATGGCTTCCTaGCCATTCTGCATATCCCTCCTGGAGTTTGAAGAC +
Preference number: 6 (lower is better)
Translates to: LPAAGPPYGMAS*PFCISLLEFED
Trigger: GTCTTCAAACTCCAGGAGGGATATGCAGAATGGCAAGGAAGCCATACCATAGGGTGGGCCTGCAGCTGGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683881.1
CDS CAA 90 bp TCCCATCCCCTACCAGCTGCAGGCCCACCCTATGGTATGGCTTCCTaGCCATTCTGCATATCCCTCCTGGAGTTTGAAGACAGGAAGTTT +
Preference number: 6 (lower is better)
Translates to: SHPLPAAGPPYGMAS*PFCISLLEFEDRKF
Trigger: AAACTTCCTGTCTTCAAACTCCAGGAGGGATATGCAGAATGGCAAGGAAGCCATACCATAGGGTGGGCCTGCAGCTGGTAGGGGATGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683881.1
CDS GCA 72 bp TACCAGCTGCAGGCCCACCCTATGGTATGGCTTCCTTaGCATTCTGCATATCCCTCCTGGAGTTTGAAGACA +
Preference number: 6 (lower is better)
Translates to: YQLQAHPMVWLP*HSAYPSWSLKT
Trigger: TGTCTTCAAACTCCAGGAGGGATATGCAGAATGGCAAGGAAGCCATACCATAGGGTGGGCCTGCAGCTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683881.1
CDS GCA 72 bp AATGGAGCTCTCCCCATCAGTGCCCACATGGTAAACTaGTTCCTGCCTAGCGAGCTGAGTATTGCCAAGCTT +
Preference number: 6 (lower is better)
Translates to: NGALPISAHMVN*FLPSELSIAKL
Trigger: AAGCTTGGCAATACTCAGCTCGCTAGGCAGGAAGCAGTTTACCATGTGGGCACTGATGGGGAGAGCTCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683881.1
CDS TCA 72 bp CAGTCATTTGAGGACTCGATAGAATGGGGCCAAAACTaGAACATGCCAGTGGCAATGAGGCCCAGGAGGACA +
Preference number: 6 (lower is better)
Translates to: QSFEDSIEWGQN*NMPVAMRPRRT
Trigger: TGTCCTCCTGGGCCTCATTGCCACTGGCATGTTTCAGTTTTGGCCCCATTCTATCGAGTCCTCAAATGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000343631.4
ENST00000358681.8
ENST00000395673.8
ENST00000531161.6
ENST00000533608.7
ENST00000682359.1
ENST00000682815.1
ENST00000682947.1
ENST00000682993.1
ENST00000683000.1
ENST00000683299.1
ENST00000683870.1
ENST00000683881.1
ENST00000684039.1
ENST00000684124.1
ENST00000684533.1
CDS TCA 72 bp GGCCCGGTTGATGTCATCAGTGTAGTAGTCACTGTCTaGGATGGCCATGAGCAGTTCATTATACTCCCGGGA +
Preference number: 6 (lower is better)
Translates to: GPVDVISVVVTV*DGHEQFIILPG
Trigger: TCCCGGGAGTATAATGAACTGCTCATGGCCATCTCAGACAGTGACTACTACACTGATGACATCAACCGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000343631.4
ENST00000358681.8
ENST00000395673.8
ENST00000529186.1
ENST00000531161.6
ENST00000533608.7
ENST00000682359.1
ENST00000682815.1
ENST00000682947.1
ENST00000682993.1
ENST00000683000.1
ENST00000683299.1
ENST00000683870.1
ENST00000683881.1
ENST00000684039.1
ENST00000684124.1
ENST00000684533.1
CDS TCA 72 bp AGGCCAGATCAGGGAGTTCATTTGGTGATTAGCAGCTaGCCAGTTCTCTCTCCTGGCTGGTTCCATGAAGAG +
Preference number: 6 (lower is better)
Translates to: RPDQGVHLVISS*PVLSPGWFHEE
Trigger: CTCTTCATGGAACCAGCCAGGAGAGAGAACTGGTCAGCTGCTAATCACCAAATGAACTCCCTGATCTGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358681.8
CDS TCA 72 bp GAGCAACTAGAGGCTTCCCCAACACACAAGTGTTGCTaGGTCCAGAAAGGACACTTCATGCCATTCCCTAGG +
Preference number: 6 (lower is better)
Translates to: EQLEASPTHKCC*VQKGHFMPFPR
Trigger: CCTAGGGAATGGCATGAAGTGTCCTTTCTGGACTCAGCAACACTTGTGTGTTGGGGAAGCCTCTAGTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684437.1
CDS GCA 72 bp ACATTTTTCCTTCCACCCACCCTGACAGCTGGACCATaGCTCATGTGGCTAGCACTGGAATTCACTTACCAC +
Preference number: 6 (lower is better)
Translates to: TFFLPPTLTAGP*LMWLALEFTYH
Trigger: GTGGTAAGTGAATTCCAGTGCTAGCCACATGAGGCATGGTCCAGCTGTCAGGGTGGGTGGAAGGAAAAATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525559.1
CDS GCA 72 bp GCAGGCCCACCCTATGGTATGGCTTCCTTGCCATTCTaGATATCCCTCCTGGAGTTTGAAGACAGGAAGTTT +
Preference number: 6 (lower is better)
Translates to: AGPPYGMASLPF*ISLLEFEDRKF
Trigger: AAACTTCCTGTCTTCAAACTCCAGGAGGGATATGCAGAATGGCAAGGAAGCCATACCATAGGGTGGGCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683881.1
CDS GCA 72 bp TACTGTTTCGGGGGAGGGCAGAGCCTTGAGTGTGGCTaGATCATCTGCCACATACTTACCATGTTACTGCAA +
Preference number: 6 (lower is better)
Translates to: YCFGGGQSLECG*IICHILTMLLQ
Trigger: TTGCAGTAACATGGTAAGTATGTGGCAGATGATGCAGCCACACTCAAGGCTCTGCCCTCCCCCGAAACAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683881.1
CDS GCA 72 bp AGCACAAGACTTGAGAGGCCCTATAGAGTCTGCCTTTaGACTCTTCGAATCCAGCCGCCATGCTCTAAGGAA +
Preference number: 6 (lower is better)
Translates to: STRLERPYRVCL*TLRIQPPCSKE
Trigger: TTCCTTAGAGCATGGCGGCTGGATTCGAAGAGTGCAAAGGCAGACTCTATAGGGCCTCTCAAGTCTTGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683881.1
CDS CCA 72 bp GGTTGGAGGCTCACTTACCTCTCCACCATGTGTGTTTaGTCTAGTGAAAGCCCATCTATGGCTGTGCACTCA +
Preference number: 6 (lower is better)
Translates to: GWRLTYLSTMCV*SSESPSMAVHS
Trigger: TGAGTGCACAGCCATAGATGGGCTTTCACTAGACCAAACACACATGGTGGAGAGGTAAGTGAGCCTCCAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683204.1
CDS CAA 72 bp TTCCAGACGACAAGTAGTTTGGATAGACTGGGCACCTaGGACACTTCAGTGATGACCCGGAAGAGGCTCTCT +
Preference number: 6 (lower is better)
Translates to: FQTTSSLDRLGT*DTSVMTRKRLS
Trigger: AGAGAGCCTCTTCCGGGTCATCACTGAAGTGTCCAAGGTGCCCAGTCTATCCAAACTACTTGTCGTCTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000343631.4
ENST00000358681.8
ENST00000395673.8
ENST00000533608.7
ENST00000534048.1
ENST00000682359.1
ENST00000682711.1
ENST00000682815.1
ENST00000682993.1
ENST00000683000.1
ENST00000683299.1
ENST00000683870.1
ENST00000683881.1
ENST00000684124.1
ENST00000684533.1
CDS CAA 72 bp CAGCCTCTTCCTCACACTCCCTATGGTATGGCTTCCTaGCCATTCTGCATATCCCTCCTGGAGTTTGAAGAC +
Preference number: 6 (lower is better)
Translates to: QPLPHTPYGMAS*PFCISLLEFED
Trigger: GTCTTCAAACTCCAGGAGGGATATGCAGAATGGCAAGGAAGCCATACCATAGGGAGTGTGAGGAAGAGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683000.1
CDS CAA 90 bp TTGGTCTTCATTCTTGGGATGAGGGCAGGACCCCGGATATTATACTaGACCGACGCACACATAATGACACAGACAGCCTCTTCCTCACAC +
Preference number: 6 (lower is better)
Translates to: LVFILGMRAGPRILY*TDAHIMTQTASSSH
Trigger: GTGTGAGGAAGAGGCTGTCTGTGTCATTATGTGTGCGTCGGTCAAGTATAATATCCGGGGTCCTGCCCTCATCCCAAGAATGAAGACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000343631.4
ENST00000358681.8
ENST00000395673.8
ENST00000531161.6
ENST00000533608.7
ENST00000682359.1
ENST00000682815.1
ENST00000682947.1
ENST00000682993.1
ENST00000683000.1
ENST00000683299.1
ENST00000683870.1
ENST00000683881.1
ENST00000684039.1
ENST00000684124.1
ENST00000684533.1
CDS CAA 90 bp TGCTTGTGGCAGCGCTTACGGACAGAAAGGACACCCTCTGAGAGGTaGGTGCATTTATCGAGTACTAACACTGACTCTCCATGTTTGACC +
Preference number: 6 (lower is better)
Translates to: CLWQRLRTERTPSER*VHLSSTNTDSPCLT
Trigger: GGTCAAACATGGAGAGTCAGTGTTAGTACTCGATAAATGCACCAACCTCTCAGAGGGTGTCCTTTCTGTCCGTAAGCGCTGCCACAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000343631.4
ENST00000358681.8
ENST00000395673.8
ENST00000531161.6
ENST00000533608.7
ENST00000682359.1
ENST00000682815.1
ENST00000682947.1
ENST00000682993.1
ENST00000683000.1
ENST00000683299.1
ENST00000683870.1
ENST00000683881.1
ENST00000684039.1
ENST00000684124.1
CDS TCA 72 bp CCAGAAGAGAGGGAAGGATTCCCGAATTACAAAGGATaGCTGAACTGGGAAGCTGGGCTAGTTTGTGCAGCA +
Preference number: 6 (lower is better)
Translates to: PEEREGFPNYKG*LNWEAGLVCAA
Trigger: TGCTGCACAAACTAGCCCAGCTTCCCAGTTCAGTCATCCTTTGTAATTCGGGAATCCTTCCCTCTCTTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531161.6
CDS GCA 72 bp AGCCTCTTCCTCACACTCCCTATGGTATGGCTTCCTTaGCATTCTGCATATCCCTCCTGGAGTTTGAAGACA +
Preference number: 6 (lower is better)
Translates to: SLFLTLPMVWLP*HSAYPSWSLKT
Trigger: TGTCTTCAAACTCCAGGAGGGATATGCAGAATGGCAAGGAAGCCATACCATAGGGAGTGTGAGGAAGAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683000.1
CDS GCA 72 bp TTTTTGAGCACAAGACTTGAGAGGCCCTATAGAGTCTaGCTTTGCACTCTTCGAATCCAGCCGCCATGCTCT +
Preference number: 6 (lower is better)
Translates to: FLSTRLERPYRV*LCTLRIQPPCS
Trigger: AGAGCATGGCGGCTGGATTCGAAGAGTGCAAAGGCAGACTCTATAGGGCCTCTCAAGTCTTGTGCTCAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683881.1
CDS CCA 72 bp CCATTTCGGTACCACCCATGTCACCTCCCCAAGACTTaGCCTCTTACCTGTCTCTGCATTTCTTCAATCTGT +
Preference number: 6 (lower is better)
Translates to: PFRYHPCHLPKT*PLTCLCISSIC
Trigger: ACAGATTGAAGAAATGCAGAGACAGGTAAGAGGCCAAGTCTTGGGGAGGTGACATGGGTGGTACCGAAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531161.6
CDS CCA 72 bp CAGCAGTCCTCACAACTTTTAATGGAACCCGGATTTTaGGCCAGAGAGAATCACAGCAGGAGGGTCATTCCA +
Preference number: 6 (lower is better)
Translates to: QQSSQLLMEPGF*ARENHSRRVIP
Trigger: TGGAATGACCCTCCTGCTGTGATTCTCTCTGGCCCAAAATCCGGGTTCCATTAAAAGTTGTGAGGACTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000682947.1
ENST00000684039.1
CDS CCA 72 bp GGAAATAGAGATCAGAGGCTAAGGCGCACTTTTGGTTaGAGGCTCACTTACCTCTCCACCATGTGTGTTTGG +
Preference number: 6 (lower is better)
Translates to: GNRDQRLRRTFG*RLTYLSTMCVW
Trigger: CCAAACACACATGGTGGAGAGGTAAGTGAGCCTCCAACCAAAAGTGCGCCTTAGCCTCTGATCTCTATTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683204.1
CDS CAA 72 bp ATTCTTGGGATGAGGGCAGGACCCCGGATATTATACTaGACCGACGCACACATAATGACACAGACAGCCTCT +
Preference number: 6 (lower is better)
Translates to: ILGMRAGPRILY*TDAHIMTQTAS
Trigger: AGAGGCTGTCTGTGTCATTATGTGTGCGTCGGTCAAGTATAATATCCGGGGTCCTGCCCTCATCCCAAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000343631.4
ENST00000358681.8
ENST00000395673.8
ENST00000531161.6
ENST00000533608.7
ENST00000682359.1
ENST00000682815.1
ENST00000682947.1
ENST00000682993.1
ENST00000683000.1
ENST00000683299.1
ENST00000683870.1
ENST00000683881.1
ENST00000684039.1
ENST00000684124.1
ENST00000684533.1
CDS CAA 72 bp CAGCGCTTACGGACAGAAAGGACACCCTCTGAGAGGTaGGTGCATTTATCGAGTACTAACACTGACTCTCCA +
Preference number: 6 (lower is better)
Translates to: QRLRTERTPSER*VHLSSTNTDSP
Trigger: TGGAGAGTCAGTGTTAGTACTCGATAAATGCACCAACCTCTCAGAGGGTGTCCTTTCTGTCCGTAAGCGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000343631.4
ENST00000358681.8
ENST00000395673.8
ENST00000531161.6
ENST00000533608.7
ENST00000682359.1
ENST00000682815.1
ENST00000682947.1
ENST00000682993.1
ENST00000683000.1
ENST00000683299.1
ENST00000683870.1
ENST00000683881.1
ENST00000684039.1
ENST00000684124.1
CDS CAA 72 bp CGACGTGCCCACCTCCATCATGCAGTCAAACAGCTTTaGGTGCCGCTAAAATCCACCACTCATCAAAGTATG +
Preference number: 6 (lower is better)
Translates to: RRAHLHHAVKQL*VPLKSTTHQSM
Trigger: CATACTTTGATGAGTGGTGGATTTTAGCGGCACCAAAAGCTGTTTGACTGCATGATGGAGGTGGGCACGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683204.1
CDS CAA 90 bp GAGAGGTTGGTGCATTTATCGAGTACTAACACTGACTCTCCATGTTaGACCTGGAGGGCTTCTAGGTCCTCTCTGTACTCAGGATGGAGA +
Preference number: 6 (lower is better)
Translates to: ERLVHLSSTNTDSPC*TWRASRSSLYSGWR
Trigger: TCTCCATCCTGAGTACAGAGAGGACCTAGAAGCCCTCCAGGTCAAACATGGAGAGTCAGTGTTAGTACTCGATAAATGCACCAACCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000343631.4
ENST00000358681.8
ENST00000395673.8
ENST00000531161.6
ENST00000533608.7
ENST00000682359.1
ENST00000682815.1
ENST00000682947.1
ENST00000682993.1
ENST00000683000.1
ENST00000683299.1
ENST00000683870.1
ENST00000683881.1
ENST00000684039.1
ENST00000684124.1
CDS TCA 72 bp GGAAATCGAAACCCTCATACATGGCTGGTGGGAATGTaGAATGGTGCAGCCGCTTTGGAAAAGAGTTTGGCA +
Preference number: 6 (lower is better)
Translates to: GNRNPHTWLVGM*NGAAALEKSLA
Trigger: TGCCAAACTCTTTTCCAAAGCGGCTGCACCATTTCACATTCCCACCAGCCATGTATGAGGGTTTCGATTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529186.1
CDS TCA 72 bp CCCAAAGCGCTCCTGGCCACTCCAAAGTCACCATACTaGAGAAGAAGTATGATAGAGGGAAAGTCAGTAGGA +
Preference number: 6 (lower is better)
Translates to: PKALLATPKSPY*RRSMIEGKSVG
Trigger: TCCTACTGACTTTCCCTCTATCATACTTCTTCTTCAGTATGGTGACTTTGGAGTGGCCAGGAGCGCTTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683204.1
CDS TCA 72 bp GTATTTCAGAGCTGTCTTGCCCCTCTGTCTGTAATATaGGGGCTTTGCTTTCGATCCTGTTCTTGGCAGGCA +
Preference number: 6 (lower is better)
Translates to: VFQSCLAPLSVI*GLCFRSCSWQA
Trigger: TGCCTGCCAAGAACAGGATCGAAAGCAAAGCCCTCATATTACAGACAGAGGGGCAAGACAGCTCTGAAATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683204.1
CDS TCA 72 bp CATTTTAAGATCCTTACCAAACAAGCCTCTCCTATATaGTTCCCGGATACTGTTTCGGGGGAGGGCAGAGCC +
Preference number: 6 (lower is better)
Translates to: HFKILTKQASPI*FPDTVSGEGRA
Trigger: GGCTCTGCCCTCCCCCGAAACAGTATCCGGGAATCATATAGGAGAGGCTTGTTTGGTAAGGATCTTAAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683881.1
CDS TCA 72 bp ACACGGAGATCTCAGTCAAAACCATTAGGGAAGAGATaGGCCATCCCCACCAAGCTCTGCATAGATTCCACA +
Preference number: 6 (lower is better)
Translates to: TRRSQSKPLGKR*AIPTKLCIDST
Trigger: TGTGGAATCTATGCAGAGCTTGGTGGGGATGGCTCATCTCTTCCCTAATGGTTTTGACTGAGATCTCCGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683881.1
CDS GCA 72 bp GCTTCCATGGCTGTCTTAGTCACTACGACTATCACCTaGTGTGACTACAAACCCTCCAAAGAGCTTCAGCTT +
Preference number: 6 (lower is better)
Translates to: ASMAVLVTTTIT*CDYKPSKELQL
Trigger: AAGCTGAAGCTCTTTGGAGGGTTTGTAGTCACAGCAGGTGATAGTCGTAGTGACTAAGACAGCCATGGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531161.6
CDS GCA 72 bp CCTCACACTCCCTATGGTATGGCTTCCTTGCCATTCTaGATATCCCTCCTGGAGTTTGAAGACAGGAAGTTT +
Preference number: 6 (lower is better)
Translates to: PHTPYGMASLPF*ISLLEFEDRKF
Trigger: AAACTTCCTGTCTTCAAACTCCAGGAGGGATATGCAGAATGGCAAGGAAGCCATACCATAGGGAGTGTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683000.1
CDS GCA 72 bp CATGCTCCCACTGAAACATATCGGGAAATGTTTCCTTaGCTCTTCCTAGCTTCTGGTAGCTGGCTGTCAATC +
Preference number: 6 (lower is better)
Translates to: HAPTETYREMFP*LFLASGSWLSI
Trigger: GATTGACAGCCAGCTACCAGAAGCTAGGAAGAGGCAAGGAAACATTTCCCGATATGTTTCAGTGGGAGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684437.1
CDS GCA 72 bp CATTCCCTAGGGCAGAGCCAGTGTGTTTGGACCCTATaGCCTTTTCAGTTTCCTAGGGTTGCTGTTAACAAA +
Preference number: 6 (lower is better)
Translates to: HSLGQSQCVWTL*PFQFPRVAVNK
Trigger: TTTGTTAACAGCAACCCTAGGAAACTGAAAAGGGCATAGGGTCCAAACACACTGGCTCTGCCCTAGGGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684437.1
CDS CCA 72 bp TTATCGAGTACTAACACTGACTCTCCATGTTTGACCTaGAGGGCTTCTAGGTCCTCTCTGTACTCAGGATGG +
Preference number: 6 (lower is better)
Translates to: LSSTNTDSPCLT*RASRSSLYSGW
Trigger: CCATCCTGAGTACAGAGAGGACCTAGAAGCCCTCCAGGTCAAACATGGAGAGTCAGTGTTAGTACTCGATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000343631.4
ENST00000358681.8
ENST00000395673.8
ENST00000531161.6
ENST00000533608.7
ENST00000682359.1
ENST00000682815.1
ENST00000682947.1
ENST00000682993.1
ENST00000683000.1
ENST00000683299.1
ENST00000683870.1
ENST00000683881.1
ENST00000684039.1
ENST00000684124.1
CDS CCA 72 bp TTGTTGATGCACTCTGACCTCTCCACCATGTGTGTTTaGTCTAGTGAAAGCCCATCTATGGCTGTGCACTCA +
Preference number: 6 (lower is better)
Translates to: LLMHSDLSTMCV*SSESPSMAVHS
Trigger: TGAGTGCACAGCCATAGATGGGCTTTCACTAGACCAAACACACATGGTGGAGAGGTCAGAGTGCATCAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000343631.4
ENST00000358681.8
ENST00000395673.8
ENST00000533608.7
ENST00000682359.1
ENST00000682711.1
ENST00000682815.1
ENST00000682947.1
ENST00000682993.1
ENST00000683000.1
ENST00000683299.1
ENST00000683870.1
ENST00000683881.1
ENST00000684039.1
ENST00000684124.1
ENST00000684437.1
ENST00000684533.1
CDS CCA 72 bp GGATATGGGGAAATCGAAACCCTCATACATGGCTGGTaGGAATGTGAAATGGTGCAGCCGCTTTGGAAAAGA +
Preference number: 6 (lower is better)
Translates to: GYGEIETLIHGW*ECEMVQPLWKR
Trigger: TCTTTTCCAAAGCGGCTGCACCATTTCACATTCCCACCAGCCATGTATGAGGGTTTCGATTTCCCCATATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529186.1
CDS CCA 72 bp CTCATTTCTGTGGGTCTTGAAGTCCCAAAGCGCTCCTaGCCACTCCAAAGTCACCATACTGAAGAAGAAGTA +
Preference number: 6 (lower is better)
Translates to: LISVGLEVPKRS*PLQSHHTEEEV
Trigger: TACTTCTTCTTCAGTATGGTGACTTTGGAGTGGCCAGGAGCGCTTTGGGACTTCAAGACCCACAGAAATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683204.1
CDS CAA 72 bp GATGTCCTAAGCAACAACTTCATGAACCACTCAGTCTaGCTCCGCATTTGCCCTGGTCCTTTCTCTGGAAGA +
Preference number: 6 (lower is better)
Translates to: DVLSNNFMNHSV*LRICPGPFSGR
Trigger: TCTTCCAGAGAAAGGACCAGGGCAAATGCGGAGCAAGACTGAGTGGTTCATGAAGTTGTTGCTTAGGACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529186.1
CDS CAA 72 bp GAGCTGTCTTGCCCCTCTGTCTGTAATATGAGGGCTTaGCTTTCGATCCTGTTCTTGGCAGGCATTTCCATA +
Preference number: 6 (lower is better)
Translates to: ELSCPSVCNMRA*LSILFLAGISI
Trigger: TATGGAAATGCCTGCCAAGAACAGGATCGAAAGCAAAGCCCTCATATTACAGACAGAGGGGCAAGACAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683204.1
CDS CAA 90 bp CACATTCAGACCTCCACCAATGACACGTTTCATAAGCTGCCAATGTaGGGGAAGCTCTTCAGCTTCTCAGGAAAGTCATCTTTGTACAGG +
Preference number: 6 (lower is better)
Translates to: HIQTSTNDTFHKLPM*GKLFSFSGKSSLYR
Trigger: CCTGTACAAAGATGACTTTCCTGAGAAGCTGAAGAGCTTCCCCAACATTGGCAGCTTATGAAACGTGTCATTGGTGGAGGTCTGAATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000343631.4
ENST00000358681.8
ENST00000395673.8
ENST00000533608.7
ENST00000682359.1
ENST00000682711.1
ENST00000682815.1
ENST00000682947.1
ENST00000682993.1
ENST00000683000.1
ENST00000683299.1
ENST00000683870.1
ENST00000683881.1
ENST00000684039.1
ENST00000684124.1
ENST00000684437.1
ENST00000684533.1
CDS CAA 90 bp TGCCCCTCTGTCTGTAATATGAGGGCTTTGCTTTCGATCCTGTTCTaGGCAGGCATTTCCATAGTGTCAGCAAAGGTAATTTGTCTCTGG +
Preference number: 6 (lower is better)
Translates to: CPSVCNMRALLSILF*AGISIVSAKVICLW
Trigger: CCAGAGACAAATTACCTTTGCTGACACTATGGAAATGCCTGCCAAGAACAGGATCGAAAGCAAAGCCCTCATATTACAGACAGAGGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683204.1
CDS TCA 72 bp TGCATTTATCGAGTACTAACACTGACTCTCCATGTTTaGCCTGGAGGGCTTCTAGGTCCTCTCTGTACTCAG +
Preference number: 6 (lower is better)
Translates to: CIYRVLTLTLHV*PGGLLGPLCTQ
Trigger: CTGAGTACAGAGAGGACCTAGAAGCCCTCCAGGTCAAACATGGAGAGTCAGTGTTAGTACTCGATAAATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000343631.4
ENST00000358681.8
ENST00000395673.8
ENST00000531161.6
ENST00000533608.7
ENST00000682359.1
ENST00000682815.1
ENST00000682947.1
ENST00000682993.1
ENST00000683000.1
ENST00000683299.1
ENST00000683870.1
ENST00000683881.1
ENST00000684039.1
ENST00000684124.1
CDS GCA 72 bp GCTTACGGACAGAAAGGACACCCTCTGAGAGGTTGGTaGATTTATCGAGTACTAACACTGACTCTCCATGTT +
Preference number: 6 (lower is better)
Translates to: AYGQKGHPLRGW*IYRVLTLTLHV
Trigger: AACATGGAGAGTCAGTGTTAGTACTCGATAAATGCACCAACCTCTCAGAGGGTGTCCTTTCTGTCCGTAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000343631.4
ENST00000358681.8
ENST00000395673.8
ENST00000531161.6
ENST00000533608.7
ENST00000682359.1
ENST00000682815.1
ENST00000682947.1
ENST00000682993.1
ENST00000683000.1
ENST00000683299.1
ENST00000683870.1
ENST00000683881.1
ENST00000684039.1
ENST00000684124.1
CDS CCA 72 bp GGTGATATAGTAGATTCGGTGCTTGGTCTTCATTCTTaGGATGAGGGCAGGACCCCGGATATTATACTTGAC +
Preference number: 6 (lower is better)
Translates to: GDIVDSVLGLHS*DEGRTPDIILD
Trigger: GTCAAGTATAATATCCGGGGTCCTGCCCTCATCCCAAGAATGAAGACCAAGCACCGAATCTACTATATCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000343631.4
ENST00000358681.8
ENST00000395673.8
ENST00000531161.6
ENST00000533608.7
ENST00000682359.1
ENST00000682815.1
ENST00000682947.1
ENST00000682993.1
ENST00000683000.1
ENST00000683299.1
ENST00000683870.1
ENST00000683881.1
ENST00000684039.1
ENST00000684124.1
ENST00000684533.1
CDS CCA 72 bp AGGGTCATTCCATTCTTCATAGGAGATGGCAGCATATaGATAGATCCGGTCATTGATAATCTGCAGGGTGGC +
Preference number: 6 (lower is better)
Translates to: RVIPFFIGDGSI*IDPVIDNLQGG
Trigger: GCCACCCTGCAGATTATCAATGACCGGATCTATCCATATGCTGCCATCTCCTATGAAGAATGGAATGACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000343631.4
ENST00000395673.8
ENST00000525559.1
ENST00000533608.7
ENST00000534048.1
ENST00000682359.1
ENST00000682711.1
ENST00000682815.1
ENST00000682947.1
ENST00000682993.1
ENST00000683000.1
ENST00000683299.1
ENST00000683870.1
ENST00000683881.1
ENST00000684039.1
ENST00000684124.1
ENST00000684533.1
CDS CAA 72 bp ACCTCCACCAATGACACGTTTCATAAGCTGCCAATGTaGGGGAAGCTCTTCAGCTTCTCAGGAAAGTCATCT +
Preference number: 6 (lower is better)
Translates to: TSTNDTFHKLPM*GKLFSFSGKSS
Trigger: AGATGACTTTCCTGAGAAGCTGAAGAGCTTCCCCAACATTGGCAGCTTATGAAACGTGTCATTGGTGGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000343631.4
ENST00000358681.8
ENST00000395673.8
ENST00000533608.7
ENST00000682359.1
ENST00000682711.1
ENST00000682815.1
ENST00000682947.1
ENST00000682993.1
ENST00000683000.1
ENST00000683299.1
ENST00000683870.1
ENST00000683881.1
ENST00000684039.1
ENST00000684124.1
ENST00000684437.1
ENST00000684533.1
CDS TCA 72 bp ATCACGGATGCTGCGCTTCTCTACATTCCAGTCATTTaGGGACTCGATAGAATGGGGCCAAAACTGAAACAT +
Preference number: 6 (lower is better)
Translates to: ITDAALLYIPVI*GLDRMGPKLKH
Trigger: ATGTTTCAGTTTTGGCCCCATTCTATCGAGTCCTCAAATGACTGGAATGTAGAGAAGCGCAGCATCCGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000343631.4
ENST00000358681.8
ENST00000395673.8
ENST00000531161.6
ENST00000533608.7
ENST00000682359.1
ENST00000682815.1
ENST00000682947.1
ENST00000682993.1
ENST00000683000.1
ENST00000683299.1
ENST00000683870.1
ENST00000683881.1
ENST00000684039.1
ENST00000684124.1
ENST00000684533.1
CDS TCA 72 bp GCAGTTCCTCAAAAAGTTAAACATAGAGCTACCGTATaGCCCAGCAGTTCTGCTCCTAGGTCAAGAGAACTG +
Preference number: 6 (lower is better)
Translates to: AVPQKVKHRATV*PSSSAPRSREL
Trigger: CAGTTCTCTTGACCTAGGAGCAGAACTGCTGGGTCATACGGTAGCTCTATGTTTAACTTTTTGAGGAACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529186.1
CDS TCA 72 bp GCTACTATATCCTTATCTGAGTGCATTTTGGTCCCCTaGCAAGCACTACTGGGATGTCAGAGTTTGCTGTCT +
Preference number: 6 (lower is better)
Translates to: ATISLSECILVP*QALLGCQSLLS
Trigger: AGACAGCAAACTCTGACATCCCAGTAGTGCTTGTCAGGGGACCAAAATGCACTCAGATAAGGATATAGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683204.1
CDS TCA 72 bp TCTGAAAGCAAGGCGTTATTAAGGCCATGCTCCCACTaGAACATATCGGGAAATGTTTCCTTGCCTCTTCCT +
Preference number: 6 (lower is better)
Translates to: SESKALLRPCSH*NISGNVSLPLP
Trigger: AGGAAGAGGCAAGGAAACATTTCCCGATATGTTTCAGTGGGAGCATGGCCTTAATAACGCCTTGCTTTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684437.1
CDS GCA 72 bp CCTTCCTTTCCTCATGTTCAATCCATTAGCGAGTACTaGTGGCTCTTCTTCTATCTCTTACCACCTCTAGTG +
Preference number: 6 (lower is better)
Translates to: PSFPHVQSISEY*WLFFYLLPPLV
Trigger: CACTAGAGGTGGTAAGAGATAGAAGAAGAGCCAGCAGTACTCGCTAATGGATTGAACATGAGGAAAGGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684437.1
CDS CCA 72 bp GCTGAAAGACTGGAGGCCTGGGTTCTGCATTATCTATaGGATCTTAAGCAAGTCCATTCTTCTCAGCATAAG +
Preference number: 6 (lower is better)
Translates to: AERLEAWVLHYL*DLKQVHSSQHK
Trigger: CTTATGCTGAGAAGAATGGACTTGCTTAAGATCCCATAGATAATGCAGAACCCAGGCCTCCAGTCTTTCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683204.1
CDS CCA 72 bp TCCTTTCCTCATGTTCAATCCATTAGCGAGTACTGCTaGCTCTTCTTCTATCTCTTACCACCTCTAGTGCCA +
Preference number: 6 (lower is better)
Translates to: SFPHVQSISEYC*LFFYLLPPLVP
Trigger: TGGCACTAGAGGTGGTAAGAGATAGAAGAAGAGCCAGCAGTACTCGCTAATGGATTGAACATGAGGAAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684437.1
CDS CAA 72 bp AGTGAAAGCCCATCTATGGCTGTGCACTCAGGACACTaGAATTTCTTTCGTGGGGTTACCTTGATAACTGCT +
Preference number: 6 (lower is better)
Translates to: SESPSMAVHSGH*NFFRGVTLITA
Trigger: AGCAGTTATCAAGGTAACCCCACGAAAGAAATTCAAGTGTCCTGAGTGCACAGCCATAGATGGGCTTTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000343631.4
ENST00000358681.8
ENST00000395673.8
ENST00000533608.7
ENST00000682359.1
ENST00000682711.1
ENST00000682815.1
ENST00000682947.1
ENST00000682993.1
ENST00000683000.1
ENST00000683204.1
ENST00000683299.1
ENST00000683870.1
ENST00000683881.1
ENST00000684039.1
ENST00000684124.1
ENST00000684437.1
ENST00000684533.1
CDS TCA 72 bp TCTCTGTTGCTAGTTCCTCAACCATCACCAGACTTCTaGGAATTCGGTCCTAGGCTCTATTCTCTTCTTCAA +
Preference number: 6 (lower is better)
Translates to: SLLLVPQPSPDF*EFGPRLYSLLQ
Trigger: TTGAAGAAGAGAATAGAGCCTAGGACCGAATTCTCAGAAGTCTGGTGATGGTTGAGGAACTAGCAACAGAGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684437.1
CDS TCA 72 bp CTTTGTTGGATTAAGCAGAATTGGGTATACTGGGGATaGGGAACTTCCAGTACCTTCTCCCATGTGTTTCTG +
Preference number: 6 (lower is better)
Translates to: LCWIKQNWVYWG*GTSSTFSHVFL
Trigger: CAGAAACACATGGGAGAAGGTACTGGAAGTTCCTCATCCCCAGTATACCCAATTCTGCTTAATCCAACAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684437.1
CDS GCA 72 bp CAAAGGATGACTGAACTGGGAAGCTGGGCTAGTTTGTaGAGCAATAGTATCATGGTCAATAGCTACACAGAA +
Preference number: 6 (lower is better)
Translates to: QRMTELGSWASL*SNSIMVNSYTE
Trigger: TTCTGTGTAGCTATTGACCATGATACTATTGCTGCACAAACTAGCCCAGCTTCCCAGTTCAGTCATCCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531161.6
CDS GCA 72 bp ATGAACACATGGCTGAAAGACTGGAGGCCTGGGTTCTaGATTATCTATGGGATCTTAAGCAAGTCCATTCTT +
Preference number: 6 (lower is better)
Translates to: MNTWLKDWRPGF*IIYGILSKSIL
Trigger: AAGAATGGACTTGCTTAAGATCCCATAGATAATGCAGAACCCAGGCCTCCAGTCTTTCAGCCATGTGTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683204.1
CDS CCA 72 bp ATAATGCATGAACACATGGCTGAAAGACTGGAGGCCTaGGTTCTGCATTATCTATGGGATCTTAAGCAAGTC +
Preference number: 6 (lower is better)
Translates to: IMHEHMAERLEA*VLHYLWDLKQV
Trigger: GACTTGCTTAAGATCCCATAGATAATGCAGAACCCAGGCCTCCAGTCTTTCAGCCATGTGTTCATGCATTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683204.1
CDS CAA 72 bp TCATGTAATTGTAGAAAAATCTCATTTCTGTGGGTCTaGAAGTCCCAAAGCGCTCCTGGCCACTCCAAAGTC +
Preference number: 6 (lower is better)
Translates to: SCNCRKISFLWV*KSQSAPGHSKV
Trigger: GACTTTGGAGTGGCCAGGAGCGCTTTGGGACTTCAAGACCCACAGAAATGAGATTTTTCTACAATTACATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683204.1
CDS CAA 90 bp AAAAGTCCATCATGTAATTGTAGAAAAATCTCATTTCTGTGGGTCTaGAAGTCCCAAAGCGCTCCTGGCCACTCCAAAGTCACCATACTG +
Preference number: 6 (lower is better)
Translates to: KSPSCNCRKISFLWV*KSQSAPGHSKVTIL
Trigger: CAGTATGGTGACTTTGGAGTGGCCAGGAGCGCTTTGGGACTTCAAGACCCACAGAAATGAGATTTTTCTACAATTACATGATGGACTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683204.1
CDS TCA 72 bp AGATTAAGGATTCTTGCTGGGGACAGAGGTGAGGACTaGCTGCTATTGGATATTAGGTTTATTTGTGGAGTC +
Preference number: 6 (lower is better)
Translates to: RLRILAGDRGED*LLLDIRFICGV
Trigger: GACTCCACAAATAAACCTAATATCCAATAGCAGTCAGTCCTCACCTCTGTCCCCAGCAAGAATCCTTAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529186.1
CDS TCA 72 bp ACTTCCCAAGAAGCTCTCAAGGTCTATGTGTATACTTaGATCAGTGGTTCCCCAACACCAAAAGCATCTCAA +
Preference number: 6 (lower is better)
Translates to: TSQEALKVYVYT*ISGSPTPKASQ
Trigger: TTGAGATGCTTTTGGTGTTGGGGAACCACTGATTCAAGTATACACATAGACCTTGAGAGCTTCTTGGGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683000.1
CDS TCA 72 bp TTGCCATGTACTAGTCTTGTGACATGTACAGTTCTTTaGGTATCAGTTTCCTCATCTGGAGATGAGGAGGTC +
Preference number: 6 (lower is better)
Translates to: LPCTSLVTCTVL*VSVSSSGDEEV
Trigger: GACCTCCTCATCTCCAGATGAGGAAACTGATACTCAAAGAACTGTACATGTCACAAGACTAGTACATGGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682815.1
ENST00000684124.1
CDS TCA 72 bp AATCAAGTCCCAATTCAGACAGCAACCATTCAGTGCTaGGTTATCCAAACAGGTATCAACAGACTTCCTAGG +
Preference number: 6 (lower is better)
Translates to: NQVPIQTATIQC*VIQTGINRLPR
Trigger: CCTAGGAAGTCTGTTGATACCTGTTTGGATAACTCAGCACTGAATGGTTGCTGTCTGAATTGGGACTTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684437.1
CDS CCA 72 bp ATTCCCGAATTACAAAGGATGACTGAACTGGGAAGCTaGGCTAGTTTGTGCAGCAATAGTATCATGGTCAAT +
Preference number: 6 (lower is better)
Translates to: IPELQRMTELGS*ASLCSNSIMVN
Trigger: ATTGACCATGATACTATTGCTGCACAAACTAGCCCAGCTTCCCAGTTCAGTCATCCTTTGTAATTCGGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531161.6
CDS CCA 72 bp AGAAGCTCTCAAGGTCTATGTGTATACTTGAATCAGTaGTTCCCCAACACCAAAAGCATCTCAAGGAGAAAC +
Preference number: 6 (lower is better)
Translates to: RSSQGLCVYLNQ*FPNTKSISRRN
Trigger: GTTTCTCCTTGAGATGCTTTTGGTGTTGGGGAACCACTGATTCAAGTATACACATAGACCTTGAGAGCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683000.1
CDS CCA 72 bp GGTAAGAAGCACAAGAGTTTGTTAAAACAGATTCCTTaGCCCCACCACTGGAGGCTGTTATCAGTAAGTTTA +
Preference number: 6 (lower is better)
Translates to: GKKHKSLLKQIP*PHHWRLLSVSL
Trigger: TAAACTTACTGATAACAGCCTCCAGTGGTGGGGCCAAGGAATCTGTTTTAACAAACTCTTGTGCTTCTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683881.1
CDS CAA 72 bp TTACAAAGGATGACTGAACTGGGAAGCTGGGCTAGTTaGTGCAGCAATAGTATCATGGTCAATAGCTACACA +
Preference number: 6 (lower is better)
Translates to: LQRMTELGSWAS*CSNSIMVNSYT
Trigger: TGTGTAGCTATTGACCATGATACTATTGCTGCACAAACTAGCCCAGCTTCCCAGTTCAGTCATCCTTTGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531161.6
CDS CAA 72 bp AACTTCCCAAGAAGCTCTCAAGGTCTATGTGTATACTaGAATCAGTGGTTCCCCAACACCAAAAGCATCTCA +
Preference number: 6 (lower is better)
Translates to: NFPRSSQGLCVY*NQWFPNTKSIS
Trigger: TGAGATGCTTTTGGTGTTGGGGAACCACTGATTCAAGTATACACATAGACCTTGAGAGCTTCTTGGGAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683000.1
CDS CAA 90 bp ATTCCCGAATTACAAAGGATGACTGAACTGGGAAGCTGGGCTAGTTaGTGCAGCAATAGTATCATGGTCAATAGCTACACAGAAGTATTG +
Preference number: 6 (lower is better)
Translates to: IPELQRMTELGSWAS*CSNSIMVNSYTEVL
Trigger: CAATACTTCTGTGTAGCTATTGACCATGATACTATTGCTGCACAAACTAGCCCAGCTTCCCAGTTCAGTCATCCTTTGTAATTCGGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531161.6
CDS GCA 72 bp GGTATACAGGTAATTAAAATACTTGTGATAAAAAGCTaGCCCAGTGAGCACCATGGACACTTCATTCGTCCA +
Preference number: 6 (lower is better)
Translates to: GIQVIKILVIKS*PSEHHGHFIRP
Trigger: TGGACGAATGAAGTGTCCATGGTGCTCACTGGGGCAGCTTTTTATCACAAGTATTTTAATTACCTGTATACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 19 transcripts:
ENST00000343631.4
ENST00000358681.8
ENST00000395673.8
ENST00000528159.1
ENST00000533608.7
ENST00000682359.1
ENST00000682711.1
ENST00000682815.1
ENST00000682947.1
ENST00000682993.1
ENST00000683000.1
ENST00000683204.1
ENST00000683299.1
ENST00000683870.1
ENST00000683881.1
ENST00000684039.1
ENST00000684124.1
ENST00000684437.1
ENST00000684533.1
CDS CCA 72 bp GTGAAACAATGTCGTGTCCTGCTCATAATGGTCTCATaGGATACTTTTATTGTGCTGTTAAGGCCTGTGTTT +
Preference number: 6 (lower is better)
Translates to: VKQCRVLLIMVS*DTFIVLLRPVF
Trigger: AAACACAGGCCTTAACAGCACAATAAAAGTATCCCATGAGACCATTATGAGCAGGACACGACATTGTTTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682993.1
CDS CAA 72 bp TTTACATTTGTTAAGATCTCAGTAGTGCTAGAGGAGTaGTTTAGCCTCAGCATGAACTTCAAGGCCACCATC +
Preference number: 6 (lower is better)
Translates to: FTFVKISVVLEE*FSLSMNFKATI
Trigger: GATGGTGGCCTTGAAGTTCATGCTGAGGCTAAACAACTCCTCTAGCACTACTGAGATCTTAACAAATGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683204.1
CDS CAA 90 bp TGCATCATCTGCCACATACTTACCATGTTACTGCAACAAGCTATTTaGGCATCCTGCATGTCAAAATACCAATCCACAAAAAGACAGCTG +
Preference number: 6 (lower is better)
Translates to: CIICHILTMLLQQAI*ASCMSKYQSTKRQL
Trigger: CAGCTGTCTTTTTGTGGATTGGTATTTTGACATGCAGGATGCCAAAATAGCTTGTTGCAGTAACATGGTAAGTATGTGGCAGATGATGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683881.1
CDS TCA 72 bp TATGACCCAGCAGTTCTGCTCCTAGGTCAAGAGAACTaGAACCAGCTTTACATACAAACTTGTATACAAATG +
Preference number: 6 (lower is better)
Translates to: YDPAVLLLGQEN*NQLYIQTCIQM
Trigger: CATTTGTATACAAGTTTGTATGTAAAGCTGGTTTCAGTTCTCTTGACCTAGGAGCAGAACTGCTGGGTCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529186.1
CDS TCA 72 bp CTAACATTAATTTCCTATCGTTTCAGTTTGGCTAGTTaGTCTAGTGGAGGAAGTAAACCCCACTCAGGCATT +
Preference number: 6 (lower is better)
Translates to: LTLISYRFSLAS*SSGGSKPHSGI
Trigger: AATGCCTGAGTGGGGTTTACTTCCTCCACTAGATCAACTAGCCAAACTGAAACGATAGGAAATTAATGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531161.6
CDS GCA 72 bp TCAATCTTCTCCATCTCAATAAATCATCCGGCCAGTTaGTCAAACCCAAAAGCTAAGACTCAGTCTTTATTC +
Preference number: 6 (lower is better)
Translates to: SIFSISINHPAS*SNPKAKTQSLF
Trigger: GAATAAAGACTGAGTCTTAGCTTTTGGGTTTGAGCAACTGGCCGGATGATTTATTGAGATGGAGAAGATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684437.1
CDS CAA 72 bp CTTGAAAAGATCCATACCATGAATGAGTATAACAATTaGTTGGCTAGTCTTGGTGCTTCTTCTCAGTCTCTG +
Preference number: 6 (lower is better)
Translates to: LEKIHTMNEYNN*LASLGASSQSL
Trigger: CAGAGACTGAGAAGAAGCACCAAGACTAGCCAACAAATTGTTATACTCATTCATGGTATGGATCTTTTCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684437.1
CDS TCA 72 bp TTTACAAAGACGAACACCAACAGTTCTTTCCATCCCTaGATTTGCATGGTACTTCTCCAAACAAAATGTAGA +
Preference number: 6 (lower is better)
Translates to: FTKTNTNSSFHP*ICMVLLQTKCR
Trigger: TCTACATTTTGTTTGGAGAAGTACCATGCAAATTCAGGGATGGAAAGAACTGTTGGTGTTCGTCTTTGTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683881.1
CDS CAA 72 bp GCCGCTAAAATCCACCACTCATCAAAGTATGTTTTATaGAATGAGTGTAGCTTCCTTAACTCAGCACTTTAT +
Preference number: 6 (lower is better)
Translates to: AAKIHHSSKYVL*NECSFLNSALY
Trigger: ATAAAGTGCTGAGTTAAGGAAGCTACACTCATTCAATAAAACATACTTTGATGAGTGGTGGATTTTAGCGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683204.1
CDS CAA 72 bp CAACTTTCTGCACACACACACAAAAATTCTCTAGGCTaGAAGAATTCTAATATAGCTGACAGATTTCAGAAA +
Preference number: 6 (lower is better)
Translates to: QLSAHTHKNSLG*KNSNIADRFQK
Trigger: TTTCTGAAATCTGTCAGCTATATTAGAATTCTTCAAGCCTAGAGAATTTTTGTGTGTGTGTGCAGAAAGTTG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683204.1