Pregenerated sensors for EXOSC6 (Homo sapiens)
Ensembl gene IDs: ENSG00000223496Ensembl transcript IDs: ENST00000435634.3
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATATCAGGGCCCTTCCAGGAATTCTCGACGCAAACTGGAGGCCGATaGCGCGGGTCTTTTCGTGGACGGCGGCAGCACGGTCCTCGGCTT | + |
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Preference number: 1 (lower is better) Translates to: ISGPFQEFSTQTGGR*RGSFRGRRQHGPRL Trigger: AAGCCGAGGACCGTGCTGCCGCCGTCCACGAAAAGACCCGCGCCATCGGCCTCCAGTTTGCGTCGAGAATTCCTGGAAGGGCCCTGATAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| 3UTR CCA 90 bp | AATACCTGCAGGCCCGACAAAGGCAGCCTAGGAATTCTAGATGAATaGAATGAATACAACTTGCTGGAAGTTCTTAGGAAACAAAATGAC | + |
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Preference number: 1 (lower is better) Translates to: NTCRPDKGSLGILDE*NEYNLLEVLRKQND Trigger: GTCATTTTGTTTCCTAAGAACTTCCAGCAAGTTGTATTCATTCCATTCATCTAGAATTCCTAGGCTGCCTTTGTCGGGCCTGCAGGTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| 3UTR-3UTR CCA 90 bp | TCCCAGCTACTCAGGAGGGTGAAGCATGAGAACTGCTTGAACCTGGGAGGCGGAGCGCGGGTCTTTTCGTaGACGGCGGCAGCACGGTCC | + |
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Preference number: 2 (lower is better) Translates to: SQLLRRVKHENCLNLGGGARVFS*TAAARS Trigger: GGACCGTGCTGCCGCCGTCCACGAAAAGACCCGCGC...TCCGCCTCCCAGGTTCAAGCAGTTCTCATGCTTCACCCTCCTGAGTAGCTGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| 3UTR-3UTR TCA 90 bp | TCCCAGCTACTCAGGAGGGTGAAGCATGAGAACTGCTTGAACCTGGGAGGCGGAATAACTTTGGGAGGCTaGGGCAGATGGATCACTGAG | + |
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Preference number: 2 (lower is better) Translates to: SQLLRRVKHENCLNLGGGITLGG*GRWITE Trigger: CTCAGTGATCCATCTGCCTCAGCCTCCCAAAGTTAT...TCCGCCTCCCAGGTTCAAGCAGTTCTCATGCTTCACCCTCCTGAGTAGCTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| 3UTR-3UTR TCA 90 bp | TCCCAGCTACTCAGGAGGGTGAAGCATGAGAACTGCTTGAACCTGGGAGGCGGATCAAAACTAAATCAATaGTCTTTTAGGCCAGGTGTG | + |
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Preference number: 2 (lower is better) Translates to: SQLLRRVKHENCLNLGGGSKLNQ*SFRPGV Trigger: CACACCTGGCCTAAAAGATCATTGATTTAGTTTTGA...TCCGCCTCCCAGGTTCAAGCAGTTCTCATGCTTCACCCTCCTGAGTAGCTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| 3UTR-3UTR CCA 90 bp | TTATGGGTTGAACTGTCATCATGTGTATGGTTTTCAGATGCTCAACAAAAGTGTCAAACTGGAGGCCGATaGCGCGGGTCTTTTCGTGGA | + |
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Preference number: 2 (lower is better) Translates to: LWVELSSCVWFSDAQQKCQTGGR*RGSFRG Trigger: TCCACGAAAAGACCCGCGCCATCGGCCTCCAGTTTG...ACACTTTTGTTGAGCATCTGAAAACCATACACATGATGACAGTTCAACCCATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| 3UTR-3UTR TCA 90 bp | TTATGGGTTGAACTGTCATCATGTGTATGGTTTTCAGATGCTCAACAAAAGTGTCTGAGATCAGGAGTTTaGGACCAGCTTGGCCAACAT | + |
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Preference number: 2 (lower is better) Translates to: LWVELSSCVWFSDAQQKCLRSGV*DQLGQH Trigger: ATGTTGGCCAAGCTGGTCTCAAACTCCTGATCTCAG...ACACTTTTGTTGAGCATCTGAAAACCATACACATGATGACAGTTCAACCCATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| 3UTR-3UTR TCA 90 bp | TTATGGGTTGAACTGTCATCATGTGTATGGTTTTCAGATGCTCAACAAAAGTGTTCAAGGCTAGGAGTTTaGGACTGCAGAAAGAAACCC | + |
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Preference number: 2 (lower is better) Translates to: LWVELSSCVWFSDAQQKCSRLGV*DCRKKP Trigger: GGGTTTCTTTCTGCAGTCTCAAACTCCTAGCCTTGA...ACACTTTTGTTGAGCATCTGAAAACCATACACATGATGACAGTTCAACCCATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| 3UTR-3UTR CCA 90 bp | TTATGGGTTGAACTGTCATCATGTGTATGGTTTTCAGATGCTCAACAAAAGTGTGGAATTCTAGATGAATaGAATGAATACAACTTGCTG | + |
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Preference number: 2 (lower is better) Translates to: LWVELSSCVWFSDAQQKCGILDE*NEYNLL Trigger: CAGCAAGTTGTATTCATTCCATTCATCTAGAATTCC...ACACTTTTGTTGAGCATCTGAAAACCATACACATGATGACAGTTCAACCCATAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| 3UTR CCA 72 bp | CCCTTCCAGGAATTCTCGACGCAAACTGGAGGCCGATaGCGCGGGTCTTTTCGTGGACGGCGGCAGCACGGT | + |
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Preference number: 3 (lower is better) Translates to: PFQEFSTQTGGR*RGSFRGRRQHG Trigger: ACCGTGCTGCCGCCGTCCACGAAAAGACCCGCGCCATCGGCCTCCAGTTTGCGTCGAGAATTCCTGGAAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| 3UTR CCA 72 bp | CATATCAGGGCCCTTCCAGGAATTCTCGACGCAAACTaGAGGCCGATGGCGCGGGTCTTTTCGTGGACGGCG | + |
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Preference number: 3 (lower is better) Translates to: HIRALPGILDAN*RPMARVFSWTA Trigger: CGCCGTCCACGAAAAGACCCGCGCCATCGGCCTCCAGTTTGCGTCGAGAATTCCTGGAAGGGCCCTGATATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| 3UTR-3UTR CAA 90 bp | TTATGGGTTGAACTGTCATCATGTGTATGGTTTTCAGATGCTCAACAAAAGTGTACTGAGATCAGGAGTTaGAGACCAGCTTGGCCAACA | + |
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Preference number: 3 (lower is better) Translates to: LWVELSSCVWFSDAQQKCTEIRS*RPAWPT Trigger: TGTTGGCCAAGCTGGTCTCAAACTCCTGATCTCAGT...ACACTTTTGTTGAGCATCTGAAAACCATACACATGATGACAGTTCAACCCATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| 3UTR-3UTR CAA 90 bp | TTATGGGTTGAACTGTCATCATGTGTATGGTTTTCAGATGCTCAACAAAAGTGTTGGAATGAATACAACTaGCTGGAAGTTCTTAGGAAA | + |
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Preference number: 3 (lower is better) Translates to: LWVELSSCVWFSDAQQKCWNEYN*LEVLRK Trigger: TTTCCTAAGAACTTCCAGCAAGTTGTATTCATTCCA...ACACTTTTGTTGAGCATCTGAAAACCATACACATGATGACAGTTCAACCCATAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS-3UTR CCA 90 bp | GCAAACTGGAGGCCGATGGCGCGGGTCTTTTCGTGGACGGCGGCAGCACGGTCCCTTCTGGTTCAGGGCTaGGCGGCGGCGCCCCTGCGG | + |
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Preference number: 4 (lower is better) Translates to: ANWRPMARVFSWTAAARSLLVQG*AAAPLR Trigger: CCGCAGGGGCGCCGCCGCCCAGCCCTGAACCAGAAG...GGACCGTGCTGCCGCCGTCCACGAAAAGACCCGCGCCATCGGCCTCCAGTTTGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS-3UTR GCA 90 bp | GCAAACTGGAGGCCGATGGCGCGGGTCTTTTCGTGGACGGCGGCAGCACGGTCCTACAGCTGCGGCGGCTaGGATTCTTCAGGGCCGCGG | + |
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Preference number: 4 (lower is better) Translates to: ANWRPMARVFSWTAAARSYSCGG*DSSGPR Trigger: CCGCGGCCCTGAAGAATCGCAGCCGCCGCAGCTGTA...GGACCGTGCTGCCGCCGTCCACGAAAAGACCCGCGCCATCGGCCTCCAGTTTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS-3UTR GCA 90 bp | GCAAACTGGAGGCCGATGGCGCGGGTCTTTTCGTGGACGGCGGCAGCACGGTCCTGGCGGTTCTTGGCGTaGGAACCCCTTCCGCCCAAC | + |
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Preference number: 4 (lower is better) Translates to: ANWRPMARVFSWTAAARSWRFLA*EPLPPN Trigger: GTTGGGCGGAAGGGGTTCGCACGCCAAGAACCGCCA...GGACCGTGCTGCCGCCGTCCACGAAAAGACCCGCGCCATCGGCCTCCAGTTTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS-3UTR GCA 90 bp | GCAAACTGGAGGCCGATGGCGCGGGTCTTTTCGTGGACGGCGGCAGCACGGTCCTCGGCCGCGTACAGCTaGGGCGGCTGCGATTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: ANWRPMARVFSWTAAARSSAAYS*GGCDSS Trigger: TGAAGAATCGCAGCCGCCGCAGCTGTACGCGGCCGA...GGACCGTGCTGCCGCCGTCCACGAAAAGACCCGCGCCATCGGCCTCCAGTTTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS-3UTR TCA 90 bp | GCAAACTGGAGGCCGATGGCGCGGGTCTTTTCGTGGACGGCGGCAGCACGGTCCGGCGGGTGGATCACCTaGGGTCAGGCATTCGAGAAC | + |
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Preference number: 4 (lower is better) Translates to: ANWRPMARVFSWTAAARSGGWIT*GQAFEN Trigger: GTTCTCGAATGCCTGACCTCAGGTGATCCACCCGCC...GGACCGTGCTGCCGCCGTCCACGAAAAGACCCGCGCCATCGGCCTCCAGTTTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS-3UTR CCA 90 bp | GCAAACTGGAGGCCGATGGCGCGGGTCTTTTCGTGGACGGCGGCAGCACGGTCCATTCTCGACGCAAACTaGAGGCCGATGGCGCGGGTC | + |
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Preference number: 4 (lower is better) Translates to: ANWRPMARVFSWTAAARSILDAN*RPMARV Trigger: GACCCGCGCCATCGGCCTCCAGTTTGCGTCGAGAAT...GGACCGTGCTGCCGCCGTCCACGAAAAGACCCGCGCCATCGGCCTCCAGTTTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS-3UTR CCA 90 bp | CATATCAGGGCCCTTCCAGGAATTCTCGACGCAAACTGGAGGCCGATGGCGCGGGCGCGGGTCTTTTCGTaGACGGCGGCAGCACGGTCC | + |
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Preference number: 4 (lower is better) Translates to: HIRALPGILDANWRPMARARVFS*TAAARS Trigger: GGACCGTGCTGCCGCCGTCCACGAAAAGACCCGCGC...CCGCGCCATCGGCCTCCAGTTTGCGTCGAGAATTCCTGGAAGGGCCCTGATATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS-3UTR TCA 90 bp | TCCCAGCTACTCAGGAGGGTGAAGCATGAGAACTGCTTGAACCTGGGAGGCGGACCGCGGATGCGGCGGTaGTCCCCAGGCATGGCGGTT | + |
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Preference number: 4 (lower is better) Translates to: SQLLRRVKHENCLNLGGGPRMRR*SPGMAV Trigger: AACCGCCATGCCTGGGGATCACCGCCGCATCCGCGG...TCCGCCTCCCAGGTTCAAGCAGTTCTCATGCTTCACCCTCCTGAGTAGCTGGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS-3UTR TCA 90 bp | GCAAACTGGAGGCCGATGGCGCGGGTCTTTTCGTGGACGGCGGCAGCACGGTCCAGCATGAGAACTGCTTaGACCTGGGAGGCGGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: ANWRPMARVFSWTAAARSSMRTA*TWEAEV Trigger: AACCTCCGCCTCCCAGGTTCAAGCAGTTCTCATGCT...GGACCGTGCTGCCGCCGTCCACGAAAAGACCCGCGCCATCGGCCTCCAGTTTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS-3UTR TCA 90 bp | GCAAACTGGAGGCCGATGGCGCGGGTCTTTTCGTGGACGGCGGCAGCACGGTCCAATCACTTGAACCTCTaGGGCGGAGGTTGCAGTGAG | + |
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Preference number: 4 (lower is better) Translates to: ANWRPMARVFSWTAAARSNHLNL*GGGCSE Trigger: CTCACTGCAACCTCCGCCTCAGAGGTTCAAGTGATT...GGACCGTGCTGCCGCCGTCCACGAAAAGACCCGCGCCATCGGCCTCCAGTTTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS-3UTR TCA 90 bp | GCAAACTGGAGGCCGATGGCGCGGGTCTTTTCGTGGACGGCGGCAGCACGGTCCGACACAAGAATCGCTTaGACCCAGGAGGCAGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: ANWRPMARVFSWTAAARSDTRIA*TQEAEV Trigger: AACCTCTGCCTCCTGGGTTCAAGCGATTCTTGTGTC...GGACCGTGCTGCCGCCGTCCACGAAAAGACCCGCGCCATCGGCCTCCAGTTTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS-3UTR GCA 90 bp | GCAAACTGGAGGCCGATGGCGCGGGTCTTTTCGTGGACGGCGGCAGCACGGTCCCCGAGATTGTGCCACTaGCCTCCAGCTTGGACAATA | + |
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Preference number: 4 (lower is better) Translates to: ANWRPMARVFSWTAAARSPRLCH*PPAWTI Trigger: TATTGTCCAAGCTGGAGGGCAGTGGCACAATCTCGG...GGACCGTGCTGCCGCCGTCCACGAAAAGACCCGCGCCATCGGCCTCCAGTTTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS-3UTR TCA 90 bp | GCAAACTGGAGGCCGATGGCGCGGGTCTTTTCGTGGACGGCGGCAGCACGGTCCCTGAGATCAGGAGTTTaGGACCAGCTTGGCCAACAT | + |
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Preference number: 4 (lower is better) Translates to: ANWRPMARVFSWTAAARSLRSGV*DQLGQH Trigger: ATGTTGGCCAAGCTGGTCTCAAACTCCTGATCTCAG...GGACCGTGCTGCCGCCGTCCACGAAAAGACCCGCGCCATCGGCCTCCAGTTTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS-3UTR CCA 90 bp | CATATCAGGGCCCTTCCAGGAATTCTCGACGCAAACTGGAGGCCGATGGCGCGGGGTGATCCCCAGGCATaGCGGTTCTTGGCGTGCGAA | + |
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Preference number: 4 (lower is better) Translates to: HIRALPGILDANWRPMARGDPQA*RFLACE Trigger: TTCGCACGCCAAGAACCGCCATGCCTGGGGATCACC...CCGCGCCATCGGCCTCCAGTTTGCGTCGAGAATTCCTGGAAGGGCCCTGATATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS-3UTR CCA 90 bp | GCAAACTGGAGGCCGATGGCGCGGGTCTTTTCGTGGACGGCGGCAGCACGGTCCATTAGCAGAGCACAGTaGCACCTGCCTGTAATCCCA | + |
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Preference number: 4 (lower is better) Translates to: ANWRPMARVFSWTAAARSISRAQ*HLPVIP Trigger: TGGGATTACAGGCAGGTGCCACTGTGCTCTGCTAAT...GGACCGTGCTGCCGCCGTCCACGAAAAGACCCGCGCCATCGGCCTCCAGTTTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS-3UTR TCA 90 bp | GCAAACTGGAGGCCGATGGCGCGGGTCTTTTCGTGGACGGCGGCAGCACGGTCCTCAAGGCTAGGAGTTTaGGACTGCAGAAAGAAACCC | + |
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Preference number: 4 (lower is better) Translates to: ANWRPMARVFSWTAAARSSRLGV*DCRKKP Trigger: GGGTTTCTTTCTGCAGTCTCAAACTCCTAGCCTTGA...GGACCGTGCTGCCGCCGTCCACGAAAAGACCCGCGCCATCGGCCTCCAGTTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS-3UTR GCA 90 bp | TCCCAGCTACTCAGGAGGGTGAAGCATGAGAACTGCTTGAACCTGGGAGGCGGACACACAGCACCTTGGTaGCTCCCGCCTCCAGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: SQLLRRVKHENCLNLGGGHTAPW*LPPPGR Trigger: CCTACCTGGAGGCGGGAGGCACCAAGGTGCTGTGTG...TCCGCCTCCCAGGTTCAAGCAGTTCTCATGCTTCACCCTCCTGAGTAGCTGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS-3UTR GCA 90 bp | CATATCAGGGCCCTTCCAGGAATTCTCGACGCAAACTGGAGGCCGATGGCGCGGCTCAGCCTCCCACAGTaGTGGGGTTACAGGAGTGAG | + |
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Preference number: 4 (lower is better) Translates to: HIRALPGILDANWRPMARLSLPQ*WGYRSE Trigger: CTCACTCCTGTAACCCCAGCACTGTGGGAGGCTGAG...CCGCGCCATCGGCCTCCAGTTTGCGTCGAGAATTCCTGGAAGGGCCCTGATATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS-3UTR CCA 90 bp | TCCCAGCTACTCAGGAGGGTGAAGCATGAGAACTGCTTGAACCTGGGAGGCGGAAGGCATGGCGGTTCTTaGCGTGCGAACCCCTTCCGC | + |
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Preference number: 4 (lower is better) Translates to: SQLLRRVKHENCLNLGGGRHGGS*RANPFR Trigger: GCGGAAGGGGTTCGCACGCCAAGAACCGCCATGCCT...TCCGCCTCCCAGGTTCAAGCAGTTCTCATGCTTCACCCTCCTGAGTAGCTGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS-3UTR TCA 90 bp | CATATCAGGGCCCTTCCAGGAATTCTCGACGCAAACTGGAGGCCGATGGCGCGGGGCAGGAGAATGGATTaGACCCAGGAGGCAGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: HIRALPGILDANWRPMARGRRMD*TQEAEV Trigger: AACCTCTGCCTCCTGGGTTCAATCCATTCTCCTGCC...CCGCGCCATCGGCCTCCAGTTTGCGTCGAGAATTCCTGGAAGGGCCCTGATATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS-3UTR GCA 90 bp | GCAAACTGGAGGCCGATGGCGCGGGTCTTTTCGTGGACGGCGGCAGCACGGTCCAGGAGTGAGCCACCATaGCCAGTTAAAAATACACTT | + |
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Preference number: 4 (lower is better) Translates to: ANWRPMARVFSWTAAARSRSEPP*PVKNTL Trigger: AAGTGTATTTTTAACTGGGCATGGTGGCTCACTCCT...GGACCGTGCTGCCGCCGTCCACGAAAAGACCCGCGCCATCGGCCTCCAGTTTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS-3UTR CCA 90 bp | TCCCAGCTACTCAGGAGGGTGAAGCATGAGAACTGCTTGAACCTGGGAGGCGGACAAACTGGAGGCCGATaGCGCGGGTCTTTTCGTGGA | + |
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Preference number: 4 (lower is better) Translates to: SQLLRRVKHENCLNLGGGQTGGR*RGSFRG Trigger: TCCACGAAAAGACCCGCGCCATCGGCCTCCAGTTTG...TCCGCCTCCCAGGTTCAAGCAGTTCTCATGCTTCACCCTCCTGAGTAGCTGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS-3UTR CCA 90 bp | TCCCAGCTACTCAGGAGGGTGAAGCATGAGAACTGCTTGAACCTGGGAGGCGGACATTCGAGAACAGCCTaGCCCACATGGCGAAACCCC | + |
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Preference number: 4 (lower is better) Translates to: SQLLRRVKHENCLNLGGGHSRTA*PTWRNP Trigger: GGGGTTTCGCCATGTGGGCCAGGCTGTTCTCGAATG...TCCGCCTCCCAGGTTCAAGCAGTTCTCATGCTTCACCCTCCTGAGTAGCTGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS-3UTR TCA 90 bp | TCCCAGCTACTCAGGAGGGTGAAGCATGAGAACTGCTTGAACCTGGGAGGCGGAGGCAGGAGAATCACTTaGACCTCTGAGGCGGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: SQLLRRVKHENCLNLGGGGRRIT*TSEAEV Trigger: AACCTCCGCCTCAGAGGTTCAAGTGATTCTCCTGCC...TCCGCCTCCCAGGTTCAAGCAGTTCTCATGCTTCACCCTCCTGAGTAGCTGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS-3UTR GCA 90 bp | CATATCAGGGCCCTTCCAGGAATTCTCGACGCAAACTGGAGGCCGATGGCGCGGTTCTCCATTAATACCTaGAGGCCCGACAAAGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: HIRALPGILDANWRPMARFSINT*RPDKGS Trigger: GCTGCCTTTGTCGGGCCTGCAGGTATTAATGGAGAA...CCGCGCCATCGGCCTCCAGTTTGCGTCGAGAATTCCTGGAAGGGCCCTGATATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS-3UTR TCA 90 bp | GCAAACTGGAGGCCGATGGCGCGGGTCTTTTCGTGGACGGCGGCAGCACGGTCCTCAAAACTAAATCAATaGTCTTTTAGGCCAGGTGTG | + |
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Preference number: 4 (lower is better) Translates to: ANWRPMARVFSWTAAARSSKLNQ*SFRPGV Trigger: CACACCTGGCCTAAAAGATCATTGATTTAGTTTTGA...GGACCGTGCTGCCGCCGTCCACGAAAAGACCCGCGCCATCGGCCTCCAGTTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS-3UTR GCA 90 bp | TCCCAGCTACTCAGGAGGGTGAAGCATGAGAACTGCTTGAACCTGGGAGGCGGACACAAGCGATCCTCCTaGCTCAGCCTTCAAGTAGCT | + |
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Preference number: 4 (lower is better) Translates to: SQLLRRVKHENCLNLGGGHKRSS*LSLQVA Trigger: AGCTACTTGAAGGCTGAGGCAGGAGGATCGCTTGTG...TCCGCCTCCCAGGTTCAAGCAGTTCTCATGCTTCACCCTCCTGAGTAGCTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS-3UTR CCA 90 bp | CATATCAGGGCCCTTCCAGGAATTCTCGACGCAAACTGGAGGCCGATGGCGCGGCACTGCCCTCCAGCTTaGACAATAGAGCAAGATTTC | + |
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Preference number: 4 (lower is better) Translates to: HIRALPGILDANWRPMARHCPPA*TIEQDF Trigger: GAAATCTTGCTCTATTGTCCAAGCTGGAGGGCAGTG...CCGCGCCATCGGCCTCCAGTTTGCGTCGAGAATTCCTGGAAGGGCCCTGATATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS-3UTR TCA 90 bp | CATATCAGGGCCCTTCCAGGAATTCTCGACGCAAACTGGAGGCCGATGGCGCGGGCATGGCCAACACAATaGAAATCCATCTCTACTAAA | + |
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Preference number: 4 (lower is better) Translates to: HIRALPGILDANWRPMARAWPTQ*KSISTK Trigger: TTTAGTAGAGATGGATTTTCATTGTGTTGGCCATGC...CCGCGCCATCGGCCTCCAGTTTGCGTCGAGAATTCCTGGAAGGGCCCTGATATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS-3UTR GCA 90 bp | TTATGGGTTGAACTGTCATCATGTGTATGGTTTTCAGATGCTCAACAAAAGTGTGCGGCCCGCGAAGGGTaGGCGGCGGAAGTCGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: LWVELSSCVWFSDAQQKCAAREG*AAEVAE Trigger: CTCTGCGACTTCCGCCGCGCACCCTTCGCGGGCCGC...ACACTTTTGTTGAGCATCTGAAAACCATACACATGATGACAGTTCAACCCATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS-3UTR CCA 90 bp | TCCCAGCTACTCAGGAGGGTGAAGCATGAGAACTGCTTGAACCTGGGAGGCGGAAAAATTAGCCCGGTATaGAGGCATGTGCCTGTAATC | + |
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Preference number: 4 (lower is better) Translates to: SQLLRRVKHENCLNLGGGKISPV*RHVPVI Trigger: GATTACAGGCACATGCCTCCATACCGGGCTAATTTT...TCCGCCTCCCAGGTTCAAGCAGTTCTCATGCTTCACCCTCCTGAGTAGCTGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS-3UTR GCA 90 bp | CATATCAGGGCCCTTCCAGGAATTCTCGACGCAAACTGGAGGCCGATGGCGCGGGGAATGAATACAACTTaGTGGAAGTTCTTAGGAAAC | + |
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Preference number: 4 (lower is better) Translates to: HIRALPGILDANWRPMARGMNTT*WKFLGN Trigger: GTTTCCTAAGAACTTCCAGCAAGTTGTATTCATTCC...CCGCGCCATCGGCCTCCAGTTTGCGTCGAGAATTCCTGGAAGGGCCCTGATATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS-3UTR GCA 90 bp | TTATGGGTTGAACTGTCATCATGTGTATGGTTTTCAGATGCTCAACAAAAGTGTCTTCAGGGCCGCGGATaGGGCGGTGATCCCCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: LWVELSSCVWFSDAQQKCLQGRG*GGDPQA Trigger: TGCCTGGGGATCACCGCCGCATCCGCGGCCCTGAAG...ACACTTTTGTTGAGCATCTGAAAACCATACACATGATGACAGTTCAACCCATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS-3UTR CCA 90 bp | CATATCAGGGCCCTTCCAGGAATTCTCGACGCAAACTGGAGGCCGATGGCGCGGGGAATTCTAGATGAATaGAATGAATACAACTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: HIRALPGILDANWRPMARGILDE*NEYNLL Trigger: CAGCAAGTTGTATTCATTCCATTCATCTAGAATTCC...CCGCGCCATCGGCCTCCAGTTTGCGTCGAGAATTCCTGGAAGGGCCCTGATATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS-3UTR GCA 90 bp | TCCCAGCTACTCAGGAGGGTGAAGCATGAGAACTGCTTGAACCTGGGAGGCGGATGTATGGTTTTCAGATaGTCAACAAAAGTGTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: SQLLRRVKHENCLNLGGGCMVFR*STKVCE Trigger: CTCACACACTTTTGTTGAGCATCTGAAAACCATACA...TCCGCCTCCCAGGTTCAAGCAGTTCTCATGCTTCACCCTCCTGAGTAGCTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS-3UTR CCA 90 bp | TTATGGGTTGAACTGTCATCATGTGTATGGTTTTCAGATGCTCAACAAAAGTGTCGGCACACAGCACCTTaGTGCCTCCCGCCTCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: LWVELSSCVWFSDAQQKCRHTAP*CLPPPG Trigger: ACCTGGAGGCGGGAGGCACCAAGGTGCTGTGTGCCG...ACACTTTTGTTGAGCATCTGAAAACCATACACATGATGACAGTTCAACCCATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS-3UTR CCA 90 bp | TCCCAGCTACTCAGGAGGGTGAAGCATGAGAACTGCTTGAACCTGGGAGGCGGACTGTCATCATGTGTATaGTTTTCAGATGCTCAACAA | + |
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Preference number: 4 (lower is better) Translates to: SQLLRRVKHENCLNLGGGLSSCV*FSDAQQ Trigger: TTGTTGAGCATCTGAAAACCATACACATGATGACAG...TCCGCCTCCCAGGTTCAAGCAGTTCTCATGCTTCACCCTCCTGAGTAGCTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| 3UTR CAA 72 bp | TTTGAGATAGGGTTGCCTATAATGGAGTGCAGTAGCTaGACCATAGCTCACTGTAGCTTCAACCTCCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: FEIGLPIMECSS*TIAHCSFNLPG Trigger: GCCTGGGAGGTTGAAGCTACAGTGAGCTATGGTCAAGCTACTGCACTCCATTATAGGCAACCCTATCTCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS-3UTR GCA 90 bp | TTATGGGTTGAACTGTCATCATGTGTATGGTTTTCAGATGCTCAACAAAAGTGTGCACGGTCCTCGGCTTaGGTCCGTAGTTGCTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: LWVELSSCVWFSDAQQKCARSSA*VRSCSG Trigger: GCCTGAGCAACTACGGACGCAAGCCGAGGACCGTGC...ACACTTTTGTTGAGCATCTGAAAACCATACACATGATGACAGTTCAACCCATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS-3UTR GCA 90 bp | TCCCAGCTACTCAGGAGGGTGAAGCATGAGAACTGCTTGAACCTGGGAGGCGGACTTATTCTTGGGAGATaGAAACTAAAACATTATGGG | + |
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Preference number: 4 (lower is better) Translates to: SQLLRRVKHENCLNLGGGLILGR*KLKHYG Trigger: CCCATAATGTTTTAGTTTGCATCTCCCAAGAATAAG...TCCGCCTCCCAGGTTCAAGCAGTTCTCATGCTTCACCCTCCTGAGTAGCTGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS-3UTR TCA 90 bp | TTATGGGTTGAACTGTCATCATGTGTATGGTTTTCAGATGCTCAACAAAAGTGTCAGGAGGGTGAAGCATaGGAACTGCTTGAACCTGGG | + |
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Preference number: 4 (lower is better) Translates to: LWVELSSCVWFSDAQQKCQEGEA*ELLEPG Trigger: CCCAGGTTCAAGCAGTTCTCATGCTTCACCCTCCTG...ACACTTTTGTTGAGCATCTGAAAACCATACACATGATGACAGTTCAACCCATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS-3UTR CCA 90 bp | TTATGGGTTGAACTGTCATCATGTGTATGGTTTTCAGATGCTCAACAAAAGTGTCTGGTCTCAAACTCCTaGACTCAGGCGATTCACCAG | + |
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Preference number: 4 (lower is better) Translates to: LWVELSSCVWFSDAQQKCLVSNS*TQAIHQ Trigger: CTGGTGAATCGCCTGAGTCCAGGAGTTTGAGACCAG...ACACTTTTGTTGAGCATCTGAAAACCATACACATGATGACAGTTCAACCCATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS GCA 90 bp | GCCCGGCGCGCGCGTACACGGGCCGTAGCCGCGTTGGGTCGCGGGTaGCGGGCGCCTCCTCCTCGTCGGCCGCGTACAGCTGCGGCGGCT | + |
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Preference number: 5 (lower is better) Translates to: ARRARTRAVAALGRG*RAPPPRRPRTAAAA Trigger: AGCCGCCGCAGCTGTACGCGGCCGACGAGGAGGAGGCGCCCGGCACCCGCGACCCAACGCGGCTACGGCCCGTGTACGCGCGCGCCGGGC 80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS GCA 90 bp | CGCCCTCGGCCTGTCGCGGGCCCGACACGGCACACAGCACCTTGGTaGCTCCCGCCTCCAGGTAGGCCGAGCCCTTGGCCTGGCTCAGCA | + |
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Preference number: 5 (lower is better) Translates to: RPRPVAGPTRHTAPW*LPPPGRPSPWPGSA Trigger: TGCTGAGCCAGGCCAAGGGCTCGGCCTACCTGGAGGCGGGAGGCACCAAGGTGCTGTGTGCCGTGTCGGGCCCGCGACAGGCCGAGGGCG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS CCA 90 bp | CACACAGCACCTTGGTGCCTCCCGCCTCCAGGTAGGCCGAGCCCTTaGCCTGGCTCAGCAGCCCGGCGCGCGCGTACACGGGCCGTAGCC | + |
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Preference number: 5 (lower is better) Translates to: HTAPWCLPPPGRPSP*PGSAARRARTRAVA Trigger: GGCTACGGCCCGTGTACGCGCGCGCCGGGCTGCTGAGCCAGGCCAAGGGCTCGGCCTACCTGGAGGCGGGAGGCACCAAGGTGCTGTGTG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS GCA 90 bp | CGGCCGCGTACAGCTGCGGCGGCTGCGATTCTTCAGGGCCGCGGATaGGGCGGTGATCCCCAGGCATGGCGGTTCTTGGCGTGCGAACCC | + |
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Preference number: 5 (lower is better) Translates to: RPRTAAAAAILQGRG*GGDPQAWRFLACEP Trigger: GGGTTCGCACGCCAAGAACCGCCATGCCTGGGGATCACCGCCGCATCCGCGGCCCTGAAGAATCGCAGCCGCCGCAGCTGTACGCGGCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS TCA 90 bp | TACAGCTGCGGCGGCTGCGATTCTTCAGGGCCGCGGATGCGGCGGTaGTCCCCAGGCATGGCGGTTCTTGGCGTGCGAACCCCTTCCGCC | + |
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Preference number: 5 (lower is better) Translates to: YSCGGCDSSGPRMRR*SPGMAVLGVRTPSA Trigger: GGCGGAAGGGGTTCGCACGCCAAGAACCGCCATGCCTGGGGATCACCGCCGCATCCGCGGCCCTGAAGAATCGCAGCCGCCGCAGCTGTA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS-3UTR CAA 90 bp | TCCCAGCTACTCAGGAGGGTGAAGCATGAGAACTGCTTGAACCTGGGAGGCGGACAGGCATGGCGGTTCTaGGCGTGCGAACCCCTTCCG | + |
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Preference number: 5 (lower is better) Translates to: SQLLRRVKHENCLNLGGGQAWRF*ACEPLP Trigger: CGGAAGGGGTTCGCACGCCAAGAACCGCCATGCCTG...TCCGCCTCCCAGGTTCAAGCAGTTCTCATGCTTCACCCTCCTGAGTAGCTGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS-3UTR CAA 90 bp | TCCCAGCTACTCAGGAGGGTGAAGCATGAGAACTGCTTGAACCTGGGAGGCGGAAAGCATGAGAACTGCTaGAACCTGGGAGGCGGAGGT | + |
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Preference number: 5 (lower is better) Translates to: SQLLRRVKHENCLNLGGGKHENC*NLGGGG Trigger: ACCTCCGCCTCCCAGGTTCAAGCAGTTCTCATGCTT...TCCGCCTCCCAGGTTCAAGCAGTTCTCATGCTTCACCCTCCTGAGTAGCTGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS-3UTR CAA 90 bp | CATATCAGGGCCCTTCCAGGAATTCTCGACGCAAACTGGAGGCCGATGGCGCGGTGGAATGAATACAACTaGCTGGAAGTTCTTAGGAAA | + |
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Preference number: 5 (lower is better) Translates to: HIRALPGILDANWRPMARWNEYN*LEVLRK Trigger: TTTCCTAAGAACTTCCAGCAAGTTGTATTCATTCCA...CCGCGCCATCGGCCTCCAGTTTGCGTCGAGAATTCCTGGAAGGGCCCTGATATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS-3UTR CAA 90 bp | TTATGGGTTGAACTGTCATCATGTGTATGGTTTTCAGATGCTCAACAAAAGTGTACGGCACACAGCACCTaGGTGCCTCCCGCCTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: LWVELSSCVWFSDAQQKCTAHST*VPPASR Trigger: CCTGGAGGCGGGAGGCACCAAGGTGCTGTGTGCCGT...ACACTTTTGTTGAGCATCTGAAAACCATACACATGATGACAGTTCAACCCATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS-3UTR CAA 90 bp | TTATGGGTTGAACTGTCATCATGTGTATGGTTTTCAGATGCTCAACAAAAGTGTGAGTTTGAGACCAGCTaGGCCAACATGATGAAACCC | + |
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Preference number: 5 (lower is better) Translates to: LWVELSSCVWFSDAQQKCEFETS*ANMMKP Trigger: GGGTTTCATCATGTTGGCCAAGCTGGTCTCAAACTC...ACACTTTTGTTGAGCATCTGAAAACCATACACATGATGACAGTTCAACCCATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS GCA 72 bp | GCGCGTACACGGGCCGTAGCCGCGTTGGGTCGCGGGTaGCGGGCGCCTCCTCCTCGTCGGCCGCGTACAGCT | + |
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Preference number: 6 (lower is better) Translates to: ARTRAVAALGRG*RAPPPRRPRTA Trigger: AGCTGTACGCGGCCGACGAGGAGGAGGCGCCCGGCACCCGCGACCCAACGCGGCTACGGCCCGTGTACGCGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS TCA 72 bp | GGCGGCTGCGATTCTTCAGGGCCGCGGATGCGGCGGTaGTCCCCAGGCATGGCGGTTCTTGGCGTGCGAACC | + |
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Preference number: 6 (lower is better) Translates to: GGCDSSGPRMRR*SPGMAVLGVRT Trigger: GGTTCGCACGCCAAGAACCGCCATGCCTGGGGATCACCGCCGCATCCGCGGCCCTGAAGAATCGCAGCCGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS GCA 72 bp | ACAGCTGCGGCGGCTGCGATTCTTCAGGGCCGCGGATaGGGCGGTGATCCCCAGGCATGGCGGTTCTTGGCG | + |
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Preference number: 6 (lower is better) Translates to: TAAAAAILQGRG*GGDPQAWRFLA Trigger: CGCCAAGAACCGCCATGCCTGGGGATCACCGCCGCATCCGCGGCCCTGAAGAATCGCAGCCGCCGCAGCTGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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| CDS CCA 72 bp | CTTCAGGGCCGCGGATGCGGCGGTGATCCCCAGGCATaGCGGTTCTTGGCGTGCGAACCCCTTCCGCCCAAC | + |
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Preference number: 6 (lower is better) Translates to: LQGRGCGGDPQA*RFLACEPLPPN Trigger: GTTGGGCGGAAGGGGTTCGCACGCCAAGAACCGCCATGCCTGGGGATCACCGCCGCATCCGCGGCCCTGAAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435634.3 |
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