RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EXOSC2 (Homo sapiens)

Ensembl gene IDs: ENSG00000130713

Ensembl transcript IDs: ENST00000372350.7, ENST00000372351.7, ENST00000372352.7, ENST00000372358.10, ENST00000430138.6, ENST00000463488.1, ENST00000467138.1, ENST00000490641.5, ENST00000491115.6, ENST00000495699.2, ENST00000546165.5

Found 345 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCACCCAGGCTTGGTGTTAGGACAGGAGAAAGCAGGCCTGTGGGCTaGAGGCCGTCACAGGGCCGTCAATGCAGACAAAGGGATGATCTC +
Preference number: 1 (lower is better)
Translates to: PPRLGVRTGESRPVG*RPSQGRQCRQRDDL
Trigger: GAGATCATCCCTTTGTCTGCATTGACGGCCCTGTGACGGCCTCCAGCCCACAGGCCTGCTTTCTCCTGTCCTAACACCAAGCCTGGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
3UTR TCA 90 bp TGTGGGCTGGAGGCCGTCACAGGGCCGTCAATGCAGACAAAGGGATaGTCTCTCGAGTCTTTGCTGAGCCACATATGGGGACCACACATC +
Preference number: 1 (lower is better)
Translates to: CGLEAVTGPSMQTKG*SLESLLSHIWGPHI
Trigger: GATGTGTGGTCCCCATATGTGGCTCAGCAAAGACTCGAGAGATCATCCCTTTGTCTGCATTGACGGCCCTGTGACGGCCTCCAGCCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
3UTR TCA 90 bp CAGGGCCGTCAATGCAGACAAAGGGATGATCTCTCGAGTCTTTGCTaGGCCACATATGGGGACCACACATCACAGTCTTCACTCCTGCAA +
Preference number: 1 (lower is better)
Translates to: QGRQCRQRDDLSSLC*ATYGDHTSQSSLLQ
Trigger: TTGCAGGAGTGAAGACTGTGATGTGTGGTCCCCATATGTGGCTCAGCAAAGACTCGAGAGATCATCCCTTTGTCTGCATTGACGGCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
3UTR GCA 90 bp TCTCCATATTATTCCAGGATGGGAGCCCATTCGACTGTAACACTGTaGACTTTGAAAGAGCTGAAACTATTCCCTAATACCGGGACTCAG +
Preference number: 1 (lower is better)
Translates to: SPYYSRMGAHSTVTL*TLKELKLFPNTGTQ
Trigger: CTGAGTCCCGGTATTAGGGAATAGTTTCAGCTCTTTCAAAGTGCACAGTGTTACAGTCGAATGGGCTCCCATCCTGGAATAATATGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
3UTR-3UTR GCA 90 bp GTTCATCTGCCACCCAGGCTTGGTGTTAGGACAGGAGAAAGCAGGCCTGTGGGCCACAGTCTTCACTCCTaGAAGGTCCACAGTCCCGTG +
Preference number: 2 (lower is better)
Translates to: VHLPPRLGVRTGESRPVGHSLHS*KVHSPV
Trigger: CACGGGACTGTGGACCTTGCAGGAGTGAAGACTGTG...GCCCACAGGCCTGCTTTCTCCTGTCCTAACACCAAGCCTGGGTGGCAGATGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
3UTR-3UTR GCA 90 bp ATCTGCCACCCAGGCTTGGTGTTAGGACAGGAGAAAGCAGGCCTGTGGGCTGGACACAGTCTTCACTCCTaGAAGGTCCACAGTCCCGTG +
Preference number: 2 (lower is better)
Translates to: ICHPGLVLGQEKAGLWAGHSLHS*KVHSPV
Trigger: CACGGGACTGTGGACCTTGCAGGAGTGAAGACTGTG...TCCAGCCCACAGGCCTGCTTTCTCCTGTCCTAACACCAAGCCTGGGTGGCAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
3UTR-3UTR GCA 90 bp ATCTGCCACCCAGGCTTGGTGTTAGGACAGGAGAAAGCAGGCCTGTGGGCTGGATCACAGGGCCGTCAATaGAGACAAAGGGATGATCTC +
Preference number: 2 (lower is better)
Translates to: ICHPGLVLGQEKAGLWAGSQGRQ*RQRDDL
Trigger: GAGATCATCCCTTTGTCTGCATTGACGGCCCTGTGA...TCCAGCCCACAGGCCTGCTTTCTCCTGTCCTAACACCAAGCCTGGGTGGCAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
3UTR-3UTR GCA 90 bp AGGCAGCCCGGTGTGGACATAATCACATCTATGGCTACAAGGAACACGCAACAGAGGCGTGAGCCACCGTaGCTGGCCTGCTTGGTTAAC +
Preference number: 2 (lower is better)
Translates to: RQPGVDIITSMATRNTQQRREPP*LACLVN
Trigger: GTTAACCAAGCAGGCCAGGCACGGTGGCTCACGCCT...CTGTTGCGTGTTCCTTGTAGCCATAGATGTGATTATGTCCACACCGGGCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
3UTR-3UTR GCA 90 bp AAGGCAGCCCGGTGTGGACATAATCACATCTATGGCTACAAGGAACACGCAACACACAGTCTTCACTCCTaGAAGGTCCACAGTCCCGTG +
Preference number: 2 (lower is better)
Translates to: KAARCGHNHIYGYKEHATHSLHS*KVHSPV
Trigger: CACGGGACTGTGGACCTTGCAGGAGTGAAGACTGTG...TGTTGCGTGTTCCTTGTAGCCATAGATGTGATTATGTCCACACCGGGCTGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
3UTR-3UTR CCA 90 bp AACAATGCACAGGAATTCTCACATTCTTCAGCGAGAACTCTGGCGTCTTTTTATAGCAGGCCTGTGGGCTaGAGGCCGTCACAGGGCCGT +
Preference number: 2 (lower is better)
Translates to: NNAQEFSHSSARTLASFYSRPVG*RPSQGR
Trigger: ACGGCCCTGTGACGGCCTCCAGCCCACAGGCCTGCT...ATAAAAAGACGCCAGAGTTCTCGCTGAAGAATGTGAGAATTCCTGTGCATTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372358.10
ENST00000546165.5
3UTR-3UTR CCA 90 bp AAGGCAGCCCGGTGTGGACATAATCACATCTATGGCTACAAGGAACACGCAACAACCCAGGCTGGAGTGTaGTACGCGATTTCAGCTCAC +
Preference number: 2 (lower is better)
Translates to: KAARCGHNHIYGYKEHATTQAGV*YAISAH
Trigger: GTGAGCTGAAATCGCGTACCACACTCCAGCCTGGGT...TGTTGCGTGTTCCTTGTAGCCATAGATGTGATTATGTCCACACCGGGCTGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
3UTR-3UTR TCA 90 bp AAGGCAGCCCGGTGTGGACATAATCACATCTATGGCTACAAGGAACACGCAACAGGGCACTGTGCCTTGTaGATGACAGTGAGTGGAAGA +
Preference number: 2 (lower is better)
Translates to: KAARCGHNHIYGYKEHATGHCAL*MTVSGR
Trigger: TCTTCCACTCACTGTCATTCACAAGGCACAGTGCCC...TGTTGCGTGTTCCTTGTAGCCATAGATGTGATTATGTCCACACCGGGCTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
3UTR-3UTR CCA 90 bp AAGGCAGCCCGGTGTGGACATAATCACATCTATGGCTACAAGGAACACGCAACACCTTGTTGGCCAGGCTaGTCTCGAACTATTGACCTC +
Preference number: 2 (lower is better)
Translates to: KAARCGHNHIYGYKEHATPCWPG*SRTIDL
Trigger: GAGGTCAATAGTTCGAGACCAGCCTGGCCAACAAGG...TGTTGCGTGTTCCTTGTAGCCATAGATGTGATTATGTCCACACCGGGCTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
3UTR-3UTR GCA 90 bp GACAGTGAGTGGAAGACAAAGGATTCTCCATATTATTCCAGGATGGGAGCCCATCACAGTCTTCACTCCTaGAAGGTCCACAGTCCCGTG +
Preference number: 2 (lower is better)
Translates to: DSEWKTKDSPYYSRMGAHHSLHS*KVHSPV
Trigger: CACGGGACTGTGGACCTTGCAGGAGTGAAGACTGTG...ATGGGCTCCCATCCTGGAATAATATGGAGAATCCTTTGTCTTCCACTCACTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
3UTR-3UTR CCA 90 bp AGGCAGCCCGGTGTGGACATAATCACATCTATGGCTACAAGGAACACGCAACAGCCAAAACAGACCATTTaGAGGTCAGGGATGCCATGT +
Preference number: 2 (lower is better)
Translates to: RQPGVDIITSMATRNTQQPKQTI*RSGMPC
Trigger: ACATGGCATCCCTGACCTCCAAATGGTCTGTTTTGG...CTGTTGCGTGTTCCTTGTAGCCATAGATGTGATTATGTCCACACCGGGCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
3UTR-3UTR GCA 90 bp AAGGCAGCCCGGTGTGGACATAATCACATCTATGGCTACAAGGAACACGCAACACCACCGTGCCTGGCCTaGTTGGTTAACTTTATTCTT +
Preference number: 2 (lower is better)
Translates to: KAARCGHNHIYGYKEHATPPCLA*LVNFIL
Trigger: AAGAATAAAGTTAACCAAGCAGGCCAGGCACGGTGG...TGTTGCGTGTTCCTTGTAGCCATAGATGTGATTATGTCCACACCGGGCTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
3UTR-3UTR TCA 90 bp TACAAGGAACACGCAACAGAAAATCAGATTCCAACCAAGCAAAAGGCTGCTTGTCTCTCGAGTCTTTGCTaGGCCACATATGGGGACCAC +
Preference number: 2 (lower is better)
Translates to: YKEHATENQIPTKQKAACLSSLC*ATYGDH
Trigger: GTGGTCCCCATATGTGGCTCAGCAAAGACTCGAGAG...ACAAGCAGCCTTTTGCTTGGTTGGAATCTGATTTTCTGTTGCGTGTTCCTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
3UTR-3UTR TCA 90 bp CTCAGTCATTTAAAGGATATAGGAATGGAGGCCAAAACAGACCATTTGGAGGTCCTCTCGAGTCTTTGCTaGGCCACATATGGGGACCAC +
Preference number: 2 (lower is better)
Translates to: LSHLKDIGMEAKTDHLEVLSSLC*ATYGDH
Trigger: GTGGTCCCCATATGTGGCTCAGCAAAGACTCGAGAG...GACCTCCAAATGGTCTGTTTTGGCCTCCATTCCTATATCCTTTAAATGACTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
3UTR-3UTR CCA 90 bp AGGATGGGAGCCCATTCGACTGTAACACTGTGCACTTTGAAAGAGCTGAAACTATTGCTGAGCCACATATaGGGACCACACATCACAGTC +
Preference number: 2 (lower is better)
Translates to: RMGAHSTVTLCTLKELKLLLSHI*GPHITV
Trigger: GACTGTGATGTGTGGTCCCCATATGTGGCTCAGCAA...TAGTTTCAGCTCTTTCAAAGTGCACAGTGTTACAGTCGAATGGGCTCCCATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
3UTR CAA 90 bp TATTATTCCAGGATGGGAGCCCATTCGACTGTAACACTGTGCACTTaGAAAGAGCTGAAACTATTCCCTAATACCGGGACTCAGCTGGCA +
Preference number: 2 (lower is better)
Translates to: YYSRMGAHSTVTLCT*KELKLFPNTGTQLA
Trigger: TGCCAGCTGAGTCCCGGTATTAGGGAATAGTTTCAGCTCTTTCAAAGTGCACAGTGTTACAGTCGAATGGGCTCCCATCCTGGAATAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
3UTR-3UTR CCA 90 bp AAAGGATTCTCCATATTATTCCAGGATGGGAGCCCATTCGACTGTAACACTGTGTTGCTGAGCCACATATaGGGACCACACATCACAGTC +
Preference number: 2 (lower is better)
Translates to: KGFSILFQDGSPFDCNTVLLSHI*GPHITV
Trigger: GACTGTGATGTGTGGTCCCCATATGTGGCTCAGCAA...CACAGTGTTACAGTCGAATGGGCTCCCATCCTGGAATAATATGGAGAATCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
3UTR-3UTR CCA 90 bp AACAGACCATTTGGAGGTCAGGGATGCCATGTTTTCTATTGGGGCAATTTCATGTTGCTGAGCCACATATaGGGACCACACATCACAGTC +
Preference number: 2 (lower is better)
Translates to: NRPFGGQGCHVFYWGNFMLLSHI*GPHITV
Trigger: GACTGTGATGTGTGGTCCCCATATGTGGCTCAGCAA...CATGAAATTGCCCCAATAGAAAACATGGCATCCCTGACCTCCAAATGGTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
3UTR-3UTR TCA 90 bp AATGCTCCACACTACTTCAATTATAGGATGAAAACAGCTTTGCTTTCCCAGTCTCTCTCGAGTCTTTGCTaGGCCACATATGGGGACCAC +
Preference number: 2 (lower is better)
Translates to: NAPHYFNYRMKTALLSQSLSSLC*ATYGDH
Trigger: GTGGTCCCCATATGTGGCTCAGCAAAGACTCGAGAG...AGACTGGGAAAGCAAAGCTGTTTTCATCCTATAATTGAAGTAGTGTGGAGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
3UTR-3UTR GCA 90 bp CTCAGTCATTTAAAGGATATAGGAATGGAGGCCAAAACAGACCATTTGGAGGTCGAAGCACTGTTCATCTaGCACCCAGGCTTGGTGTTA +
Preference number: 2 (lower is better)
Translates to: LSHLKDIGMEAKTDHLEVEALFI*HPGLVL
Trigger: TAACACCAAGCCTGGGTGGCAGATGAACAGTGCTTC...GACCTCCAAATGGTCTGTTTTGGCCTCCATTCCTATATCCTTTAAATGACTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
3UTR-3UTR CCA 90 bp AATGCTCCACACTACTTCAATTATAGGATGAAAACAGCTTTGCTTTCCCAGTCTGGCCTCCCTAAGTGCTaGGATTATAGGCGTGAGCCA +
Preference number: 2 (lower is better)
Translates to: NAPHYFNYRMKTALLSQSGLPKC*DYRREP
Trigger: TGGCTCACGCCTATAATCCCAGCACTTAGGGAGGCC...AGACTGGGAAAGCAAAGCTGTTTTCATCCTATAATTGAAGTAGTGTGGAGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
3UTR-3UTR TCA 90 bp CTCAGTCATTTAAAGGATATAGGAATGGAGGCCAAAACAGACCATTTGGAGGTCATGCAGACAAAGGGATaGTCTCTCGAGTCTTTGCTG +
Preference number: 2 (lower is better)
Translates to: LSHLKDIGMEAKTDHLEVMQTKG*SLESLL
Trigger: CAGCAAAGACTCGAGAGATCATCCCTTTGTCTGCAT...GACCTCCAAATGGTCTGTTTTGGCCTCCATTCCTATATCCTTTAAATGACTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
3UTR-3UTR GCA 90 bp CTCAGTCATTTAAAGGATATAGGAATGGAGGCCAAAACAGACCATTTGGAGGTCTTTCATGGGGCACTGTaGCTTGTGAATGACAGTGAG +
Preference number: 2 (lower is better)
Translates to: LSHLKDIGMEAKTDHLEVFHGAL*LVNDSE
Trigger: CTCACTGTCATTCACAAGGCACAGTGCCCCATGAAA...GACCTCCAAATGGTCTGTTTTGGCCTCCATTCCTATATCCTTTAAATGACTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
3UTR-3UTR GCA 90 bp AAGGCAGCCCGGTGTGGACATAATCACATCTATGGCTACAAGGAACACGCAACATCCAACTTTACCAGCTaGATTCTCAGTCATTTAAAG +
Preference number: 2 (lower is better)
Translates to: KAARCGHNHIYGYKEHATSNFTS*ILSHLK
Trigger: CTTTAAATGACTGAGAATGCAGCTGGTAAAGTTGGA...TGTTGCGTGTTCCTTGTAGCCATAGATGTGATTATGTCCACACCGGGCTGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
3UTR-3UTR GCA 90 bp AATGCTCCACACTACTTCAATTATAGGATGAAAACAGCTTTGCTTTCCCAGTCTGAAGCACTGTTCATCTaGCACCCAGGCTTGGTGTTA +
Preference number: 2 (lower is better)
Translates to: NAPHYFNYRMKTALLSQSEALFI*HPGLVL
Trigger: TAACACCAAGCCTGGGTGGCAGATGAACAGTGCTTC...AGACTGGGAAAGCAAAGCTGTTTTCATCCTATAATTGAAGTAGTGTGGAGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
3UTR-3UTR CCA 90 bp AATGCTCCACACTACTTCAATTATAGGATGAAAACAGCTTTGCTTTCCCAGTCTTTGCTGAGCCACATATaGGGACCACACATCACAGTC +
Preference number: 2 (lower is better)
Translates to: NAPHYFNYRMKTALLSQSLLSHI*GPHITV
Trigger: GACTGTGATGTGTGGTCCCCATATGTGGCTCAGCAA...AGACTGGGAAAGCAAAGCTGTTTTCATCCTATAATTGAAGTAGTGTGGAGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
3UTR-3UTR CCA 90 bp AATGCTCCACACTACTTCAATTATAGGATGAAAACAGCTTTGCTTTCCCAGTCTCGTGCCTGGCCTGCTTaGTTAACTTTATTCTTCCAA +
Preference number: 2 (lower is better)
Translates to: NAPHYFNYRMKTALLSQSRAWPA*LTLFFQ
Trigger: TTGGAAGAATAAAGTTAACCAAGCAGGCCAGGCACG...AGACTGGGAAAGCAAAGCTGTTTTCATCCTATAATTGAAGTAGTGTGGAGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
3UTR-3UTR GCA 90 bp AATGCTCCACACTACTTCAATTATAGGATGAAAACAGCTTTGCTTTCCCAGTCTTCGACTGTAACACTGTaGACTTTGAAAGAGCTGAAA +
Preference number: 2 (lower is better)
Translates to: NAPHYFNYRMKTALLSQSSTVTL*TLKELK
Trigger: TTTCAGCTCTTTCAAAGTGCACAGTGTTACAGTCGA...AGACTGGGAAAGCAAAGCTGTTTTCATCCTATAATTGAAGTAGTGTGGAGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
3UTR-3UTR GCA 90 bp AATGCTCCACACTACTTCAATTATAGGATGAAAACAGCTTTGCTTTCCCAGTCTTCCAACTTTACCAGCTaGATTCTCAGTCATTTAAAG +
Preference number: 2 (lower is better)
Translates to: NAPHYFNYRMKTALLSQSSNFTS*ILSHLK
Trigger: CTTTAAATGACTGAGAATGCAGCTGGTAAAGTTGGA...AGACTGGGAAAGCAAAGCTGTTTTCATCCTATAATTGAAGTAGTGTGGAGCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
3UTR CCA 72 bp CTTGGTGTTAGGACAGGAGAAAGCAGGCCTGTGGGCTaGAGGCCGTCACAGGGCCGTCAATGCAGACAAAGG +
Preference number: 3 (lower is better)
Translates to: LGVRTGESRPVG*RPSQGRQCRQR
Trigger: CCTTTGTCTGCATTGACGGCCCTGTGACGGCCTCCAGCCCACAGGCCTGCTTTCTCCTGTCCTAACACCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
3UTR GCA 72 bp CCACATATGGGGACCACACATCACAGTCTTCACTCCTaGAAGGTCCACAGTCCCGTGCTTCTGGAGCACCTC +
Preference number: 3 (lower is better)
Translates to: PHMGTTHHSLHS*KVHSPVLLEHL
Trigger: GAGGTGCTCCAGAAGCACGGGACTGTGGACCTTGCAGGAGTGAAGACTGTGATGTGTGGTCCCCATATGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
3UTR TCA 72 bp GAGGCCGTCACAGGGCCGTCAATGCAGACAAAGGGATaGTCTCTCGAGTCTTTGCTGAGCCACATATGGGGA +
Preference number: 3 (lower is better)
Translates to: EAVTGPSMQTKG*SLESLLSHIWG
Trigger: TCCCCATATGTGGCTCAGCAAAGACTCGAGAGATCATCCCTTTGTCTGCATTGACGGCCCTGTGACGGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
3UTR TCA 72 bp CAATGCAGACAAAGGGATGATCTCTCGAGTCTTTGCTaGGCCACATATGGGGACCACACATCACAGTCTTCA +
Preference number: 3 (lower is better)
Translates to: QCRQRDDLSSLC*ATYGDHTSQSS
Trigger: TGAAGACTGTGATGTGTGGTCCCCATATGTGGCTCAGCAAAGACTCGAGAGATCATCCCTTTGTCTGCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
3UTR-3UTR CAA 90 bp AAAGGATTCTCCATATTATTCCAGGATGGGAGCCCATTCGACTGTAACACTGTGATCTGCCACCCAGGCTaGGTGTTAGGACAGGAGAAA +
Preference number: 3 (lower is better)
Translates to: KGFSILFQDGSPFDCNTVICHPG*VLGQEK
Trigger: TTTCTCCTGTCCTAACACCAAGCCTGGGTGGCAGAT...CACAGTGTTACAGTCGAATGGGCTCCCATCCTGGAATAATATGGAGAATCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
3UTR-3UTR CAA 90 bp AACAGACCATTTGGAGGTCAGGGATGCCATGTTTTCTATTGGGGCAATTTCATGATCTGCCACCCAGGCTaGGTGTTAGGACAGGAGAAA +
Preference number: 3 (lower is better)
Translates to: NRPFGGQGCHVFYWGNFMICHPG*VLGQEK
Trigger: TTTCTCCTGTCCTAACACCAAGCCTGGGTGGCAGAT...CATGAAATTGCCCCAATAGAAAACATGGCATCCCTGACCTCCAAATGGTCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
3UTR-3UTR CAA 90 bp TACAAGGAACACGCAACAGAAAATCAGATTCCAACCAAGCAAAAGGCTGCTTGTCCGTGCCTGGCCTGCTaGGTTAACTTTATTCTTCCA +
Preference number: 3 (lower is better)
Translates to: YKEHATENQIPTKQKAACPCLAC*VNFILP
Trigger: TGGAAGAATAAAGTTAACCAAGCAGGCCAGGCACGG...ACAAGCAGCCTTTTGCTTGGTTGGAATCTGATTTTCTGTTGCGTGTTCCTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
3UTR TCA 72 bp TTCTATTGGGGCAATTTCATGGGGCACTGTGCCTTGTaGATGACAGTGAGTGGAAGACAAAGGATTCTCCAT +
Preference number: 3 (lower is better)
Translates to: FYWGNFMGHCAL*MTVSGRQRILH
Trigger: ATGGAGAATCCTTTGTCTTCCACTCACTGTCATTCACAAGGCACAGTGCCCCATGAAATTGCCCCAATAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
3UTR-3UTR CAA 90 bp AATGCTCCACACTACTTCAATTATAGGATGAAAACAGCTTTGCTTTCCCAGTCTGCCAAAACAGACCATTaGGAGGTCAGGGATGCCATG +
Preference number: 3 (lower is better)
Translates to: NAPHYFNYRMKTALLSQSAKTDH*EVRDAM
Trigger: CATGGCATCCCTGACCTCCAAATGGTCTGTTTTGGC...AGACTGGGAAAGCAAAGCTGTTTTCATCCTATAATTGAAGTAGTGTGGAGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
3UTR GCA 72 bp TATTCCAGGATGGGAGCCCATTCGACTGTAACACTGTaGACTTTGAAAGAGCTGAAACTATTCCCTAATACC +
Preference number: 3 (lower is better)
Translates to: YSRMGAHSTVTL*TLKELKLFPNT
Trigger: GGTATTAGGGAATAGTTTCAGCTCTTTCAAAGTGCACAGTGTTACAGTCGAATGGGCTCCCATCCTGGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
3UTR-3UTR CAA 90 bp AACAGACCATTTGGAGGTCAGGGATGCCATGTTTTCTATTGGGGCAATTTCATGGTAACACTGTGCACTTaGAAAGAGCTGAAACTATTC +
Preference number: 3 (lower is better)
Translates to: NRPFGGQGCHVFYWGNFMVTLCT*KELKLF
Trigger: GAATAGTTTCAGCTCTTTCAAAGTGCACAGTGTTAC...CATGAAATTGCCCCAATAGAAAACATGGCATCCCTGACCTCCAAATGGTCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
3UTR-3UTR CAA 90 bp TCTCAGTCATTTAAAGGATATAGGAATGGAGGCCAAAACAGACCATTTGGAGGTGTAACACTGTGCACTTaGAAAGAGCTGAAACTATTC +
Preference number: 3 (lower is better)
Translates to: SQSFKGYRNGGQNRPFGGVTLCT*KELKLF
Trigger: GAATAGTTTCAGCTCTTTCAAAGTGCACAGTGTTAC...ACCTCCAAATGGTCTGTTTTGGCCTCCATTCCTATATCCTTTAAATGACTGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR TCA 90 bp GAAAGCAGGCCTGTGGGCTGGAGGCCGTCACAGGGCCGTCAATGCAGACAAAGGGAGTTACCAGCGAGATaGTGCAGTTCCGAAGCCGGG +
Preference number: 4 (lower is better)
Translates to: ESRPVGWRPSQGRQCRQRELPAR*CSSEAG
Trigger: CCCGGCTTCGGAACTGCATCATCTCGCTGGTAACTC...CCTTTGTCTGCATTGACGGCCCTGTGACGGCCTCCAGCCCACAGGCCTGCTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR TCA 90 bp GGCCTGTGGGCTGGAGGCCGTCACAGGGCCGTCAATGCAGACAAAGGGATGATCCTCTCGAGTCTTTGCTaGGCCACATATGGGGACCAC +
Preference number: 4 (lower is better)
Translates to: GLWAGGRHRAVNADKGMILSSLC*ATYGDH
Trigger: GTGGTCCCCATATGTGGCTCAGCAAAGACTCGAGAG...GATCATCCCTTTGTCTGCATTGACGGCCCTGTGACGGCCTCCAGCCCACAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp GAAAGCAGGCCTGTGGGCTGGAGGCCGTCACAGGGCCGTCAATGCAGACAAAGGACAGTCCCGTGCTTCTaGAGCACCTCCTTATCCCTC +
Preference number: 4 (lower is better)
Translates to: ESRPVGWRPSQGRQCRQRTVPCF*STSLSL
Trigger: GAGGGATAAGGAGGTGCTCCAGAAGCACGGGACTGT...CCTTTGTCTGCATTGACGGCCCTGTGACGGCCTCCAGCCCACAGGCCTGCTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR TCA 90 bp GTTCATCTGCCACCCAGGCTTGGTGTTAGGACAGGAGAAAGCAGGCCTGTGGGCGAGTTACCAGCGAGATaGTGCAGTTCCGAAGCCGGG +
Preference number: 4 (lower is better)
Translates to: VHLPPRLGVRTGESRPVGELPAR*CSSEAG
Trigger: CCCGGCTTCGGAACTGCATCATCTCGCTGGTAACTC...GCCCACAGGCCTGCTTTCTCCTGTCCTAACACCAAGCCTGGGTGGCAGATGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR TCA 90 bp GGCCTGTGGGCTGGAGGCCGTCACAGGGCCGTCAATGCAGACAAAGGGATGATCGGGCACTGTGCCTTGTaGATGACAGTGAGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: GLWAGGRHRAVNADKGMIGHCAL*MTVSGR
Trigger: TCTTCCACTCACTGTCATTCACAAGGCACAGTGCCC...GATCATCCCTTTGTCTGCATTGACGGCCCTGTGACGGCCTCCAGCCCACAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp GGCCTGTGGGCTGGAGGCCGTCACAGGGCCGTCAATGCAGACAAAGGGATGATCCCCATATACGTTCCATaGCCCCGCATGAATCCTGTG +
Preference number: 4 (lower is better)
Translates to: GLWAGGRHRAVNADKGMIPIYVP*PRMNPV
Trigger: CACAGGATTCATGCGGGGCCATGGAACGTATATGGG...GATCATCCCTTTGTCTGCATTGACGGCCCTGTGACGGCCTCCAGCCCACAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp GAAAGCAGGCCTGTGGGCTGGAGGCCGTCACAGGGCCGTCAATGCAGACAAAGGAATCCAGCCTGGAGTTaGTCTCCACCTTCCACCTCT +
Preference number: 4 (lower is better)
Translates to: ESRPVGWRPSQGRQCRQRNPAWS*SPPSTS
Trigger: AGAGGTGGAAGGTGGAGACCAACTCCAGGCTGGATT...CCTTTGTCTGCATTGACGGCCCTGTGACGGCCTCCAGCCCACAGGCCTGCTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp AGGCAGCCCGGTGTGGACATAATCACATCTATGGCTACAAGGAACACGCAACAGAGCAGGCCTGTGGGCTaGAGGCCGTCACAGGGCCGT +
Preference number: 4 (lower is better)
Translates to: RQPGVDIITSMATRNTQQSRPVG*RPSQGR
Trigger: ACGGCCCTGTGACGGCCTCCAGCCCACAGGCCTGCT...CTGTTGCGTGTTCCTTGTAGCCATAGATGTGATTATGTCCACACCGGGCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp GAAAGCAGGCCTGTGGGCTGGAGGCCGTCACAGGGCCGTCAATGCAGACAAAGGCCTTGTTGGCCAGGCTaGTCTCGAACTATTGACCTC +
Preference number: 4 (lower is better)
Translates to: ESRPVGWRPSQGRQCRQRPCWPG*SRTIDL
Trigger: GAGGTCAATAGTTCGAGACCAGCCTGGCCAACAAGG...CCTTTGTCTGCATTGACGGCCCTGTGACGGCCTCCAGCCCACAGGCCTGCTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp GAAAGCAGGCCTGTGGGCTGGAGGCCGTCACAGGGCCGTCAATGCAGACAAAGGTGCAATGAAGCCCCCTaGTTCCTCTTCTTTGTGCTC +
Preference number: 4 (lower is better)
Translates to: ESRPVGWRPSQGRQCRQRCNEAP*FLFFVL
Trigger: GAGCACAAAGAAGAGGAAGCAGGGGGCTTCATTGCA...CCTTTGTCTGCATTGACGGCCCTGTGACGGCCTCCAGCCCACAGGCCTGCTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp GTTCATCTGCCACCCAGGCTTGGTGTTAGGACAGGAGAAAGCAGGCCTGTGGGCAGGTCCACAGTCCCGTaGTTCTGGAGCACCTCCTTA +
Preference number: 4 (lower is better)
Translates to: VHLPPRLGVRTGESRPVGRSTVP*FWSTSL
Trigger: TAAGGAGGTGCTCCAGAAGCACGGGACTGTGGACCT...GCCCACAGGCCTGCTTTCTCCTGTCCTAACACCAAGCCTGGGTGGCAGATGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp GTTCATCTGCCACCCAGGCTTGGTGTTAGGACAGGAGAAAGCAGGCCTGTGGGCCTCCAGGAAGGTTCATaGACGAGAGCAGCAAGACCG +
Preference number: 4 (lower is better)
Translates to: VHLPPRLGVRTGESRPVGLQEGS*TRAARP
Trigger: CGGTCTTGCTGCTCTCGTCCATGAACCTTCCTGGAG...GCCCACAGGCCTGCTTTCTCCTGTCCTAACACCAAGCCTGGGTGGCAGATGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp GTTCATCTGCCACCCAGGCTTGGTGTTAGGACAGGAGAAAGCAGGCCTGTGGGCGGCCTCCCTAAGTGCTaGGATTATAGGCGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: VHLPPRLGVRTGESRPVGGLPKC*DYRREP
Trigger: TGGCTCACGCCTATAATCCCAGCACTTAGGGAGGCC...GCCCACAGGCCTGCTTTCTCCTGTCCTAACACCAAGCCTGGGTGGCAGATGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp ATCTGCCACCCAGGCTTGGTGTTAGGACAGGAGAAAGCAGGCCTGTGGGCTGGAAATCCAGCCTGGAGTTaGTCTCCACCTTCCACCTCT +
Preference number: 4 (lower is better)
Translates to: ICHPGLVLGQEKAGLWAGNPAWS*SPPSTS
Trigger: AGAGGTGGAAGGTGGAGACCAACTCCAGGCTGGATT...TCCAGCCCACAGGCCTGCTTTCTCCTGTCCTAACACCAAGCCTGGGTGGCAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp TGCACTTTGAAAGAGCTGAAACTATTCCCTAATACCGGGACTCAGCTGGCAACCAGCAGGCCTGTGGGCTaGAGGCCGTCACAGGGCCGT +
Preference number: 4 (lower is better)
Translates to: CTLKELKLFPNTGTQLATSRPVG*RPSQGR
Trigger: ACGGCCCTGTGACGGCCTCCAGCCCACAGGCCTGCT...GGTTGCCAGCTGAGTCCCGGTATTAGGGAATAGTTTCAGCTCTTTCAAAGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR TCA 90 bp GGCCTGTGGGCTGGAGGCCGTCACAGGGCCGTCAATGCAGACAAAGGGATGATCTTGGGTAAATCCAGATaGAGCCGTTGTTACCGAGAA +
Preference number: 4 (lower is better)
Translates to: GLWAGGRHRAVNADKGMILGKSR*SRCYRE
Trigger: TTCTCGGTAACAACGGCTTCATCTGGATTTACCCAA...GATCATCCCTTTGTCTGCATTGACGGCCCTGTGACGGCCTCCAGCCCACAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp TATGGGGACCACACATCACAGTCTTCACTCCTGCAAGGTCCACAGTCCCGTGCTGACAGGCTCCAGGTTTaGAATGAAGCCCCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: YGDHTSQSSLLQGPQSRADRLQV*NEAPCF
Trigger: GAAGCAGGGGGCTTCATTGCAAACCTGGAGCCTGTC...AGCACGGGACTGTGGACCTTGCAGGAGTGAAGACTGTGATGTGTGGTCCCCATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp GCCACATATGGGGACCACACATCACAGTCTTCACTCCTGCAAGGTCCACAGTCCAGGTCCACAGTCCCGTaGTTCTGGAGCACCTCCTTA +
Preference number: 4 (lower is better)
Translates to: ATYGDHTSQSSLLQGPQSRSTVP*FWSTSL
Trigger: TAAGGAGGTGCTCCAGAAGCACGGGACTGTGGACCT...GGACTGTGGACCTTGCAGGAGTGAAGACTGTGATGTGTGGTCCCCATATGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp GAAAGCAGGCCTGTGGGCTGGAGGCCGTCACAGGGCCGTCAATGCAGACAAAGGTGTTCCAAAAGCCTCTaGCGTGTTTCCATCACAATC +
Preference number: 4 (lower is better)
Translates to: ESRPVGWRPSQGRQCRQRCSKSL*RVSITI
Trigger: GATTGTGATGGAAACACGCCAGAGGCTTTTGGAACA...CCTTTGTCTGCATTGACGGCCCTGTGACGGCCTCCAGCCCACAGGCCTGCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp ATCTGCCACCCAGGCTTGGTGTTAGGACAGGAGAAAGCAGGCCTGTGGGCTGGATTGCTGAGCCACATATaGGGACCACACATCACAGTC +
Preference number: 4 (lower is better)
Translates to: ICHPGLVLGQEKAGLWAGLLSHI*GPHITV
Trigger: GACTGTGATGTGTGGTCCCCATATGTGGCTCAGCAA...TCCAGCCCACAGGCCTGCTTTCTCCTGTCCTAACACCAAGCCTGGGTGGCAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp GGCCTGTGGGCTGGAGGCCGTCACAGGGCCGTCAATGCAGACAAAGGGATGATCCGTGCCTGGCCTGCTTaGTTAACTTTATTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: GLWAGGRHRAVNADKGMIRAWPA*LTLFFQ
Trigger: TTGGAAGAATAAAGTTAACCAAGCAGGCCAGGCACG...GATCATCCCTTTGTCTGCATTGACGGCCCTGTGACGGCCTCCAGCCCACAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp GCCACATATGGGGACCACACATCACAGTCTTCACTCCTGCAAGGTCCACAGTCCCTCTGTCACCCAGGCTaGAGTGTGGTACGCGATTTC +
Preference number: 4 (lower is better)
Translates to: ATYGDHTSQSSLLQGPQSLCHPG*SVVRDF
Trigger: GAAATCGCGTACCACACTCCAGCCTGGGTGACAGAG...GGACTGTGGACCTTGCAGGAGTGAAGACTGTGATGTGTGGTCCCCATATGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR TCA 90 bp AGCCACATATGGGGACCACACATCACAGTCTTCACTCCTGCAAGGTCCACAGTCGCTCCAGGTTTGCAATaGAGCCCCCTGCTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: SHIWGPHITVFTPARSTVAPGLQ*SPLLPL
Trigger: AAGAGGAAGCAGGGGGCTTCATTGCAAACCTGGAGC...GACTGTGGACCTTGCAGGAGTGAAGACTGTGATGTGTGGTCCCCATATGTGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR TCA 90 bp CGAGTCTTTGCTGAGCCACATATGGGGACCACACATCACAGTCTTCACTCCTGCCTCTCGAGTCTTTGCTaGGCCACATATGGGGACCAC +
Preference number: 4 (lower is better)
Translates to: RVFAEPHMGTTHHSLHSCLSSLC*ATYGDH
Trigger: GTGGTCCCCATATGTGGCTCAGCAAAGACTCGAGAG...GCAGGAGTGAAGACTGTGATGTGTGGTCCCCATATGTGGCTCAGCAAAGACTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR TCA 90 bp GTTCATCTGCCACCCAGGCTTGGTGTTAGGACAGGAGAAAGCAGGCCTGTGGGCATCTTCTCCTCTCTGTaGTTCGTCCCACTACGATGT +
Preference number: 4 (lower is better)
Translates to: VHLPPRLGVRTGESRPVGIFSSL*FVPLRC
Trigger: ACATCGTAGTGGGACGAATCACAGAGAGGAGAAGAT...GCCCACAGGCCTGCTTTCTCCTGTCCTAACACCAAGCCTGGGTGGCAGATGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372351.7
CDS-3UTR GCA 90 bp AGCCACATATGGGGACCACACATCACAGTCTTCACTCCTGCAAGGTCCACAGTCGACAGGCTCCAGGTTTaGAATGAAGCCCCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: SHIWGPHITVFTPARSTVDRLQV*NEAPCF
Trigger: GAAGCAGGGGGCTTCATTGCAAACCTGGAGCCTGTC...GACTGTGGACCTTGCAGGAGTGAAGACTGTGATGTGTGGTCCCCATATGTGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp ATCTGCCACCCAGGCTTGGTGTTAGGACAGGAGAAAGCAGGCCTGTGGGCTGGATTTCATGGGGCACTGTaGCTTGTGAATGACAGTGAG +
Preference number: 4 (lower is better)
Translates to: ICHPGLVLGQEKAGLWAGFHGAL*LVNDSE
Trigger: CTCACTGTCATTCACAAGGCACAGTGCCCCATGAAA...TCCAGCCCACAGGCCTGCTTTCTCCTGTCCTAACACCAAGCCTGGGTGGCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp GTTCATCTGCCACCCAGGCTTGGTGTTAGGACAGGAGAAAGCAGGCCTGTGGGCTTTCATGGGGCACTGTaGCTTGTGAATGACAGTGAG +
Preference number: 4 (lower is better)
Translates to: VHLPPRLGVRTGESRPVGFHGAL*LVNDSE
Trigger: CTCACTGTCATTCACAAGGCACAGTGCCCCATGAAA...GCCCACAGGCCTGCTTTCTCCTGTCCTAACACCAAGCCTGGGTGGCAGATGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp GCCGTCAATGCAGACAAAGGGATGATCTCTCGAGTCTTTGCTGAGCCACATATGAGGCGTGAGCCACCGTaGCTGGCCTGCTTGGTTAAC +
Preference number: 4 (lower is better)
Translates to: AVNADKGMISRVFAEPHMRREPP*LACLVN
Trigger: GTTAACCAAGCAGGCCAGGCACGGTGGCTCACGCCT...CATATGTGGCTCAGCAAAGACTCGAGAGATCATCCCTTTGTCTGCATTGACGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp ATCTGCCACCCAGGCTTGGTGTTAGGACAGGAGAAAGCAGGCCTGTGGGCTGGAATTGGGGCAATTTCATaGGGCACTGTGCCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: ICHPGLVLGQEKAGLWAGIGAIS*GTVPCE
Trigger: TTCACAAGGCACAGTGCCCCATGAAATTGCCCCAAT...TCCAGCCCACAGGCCTGCTTTCTCCTGTCCTAACACCAAGCCTGGGTGGCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp CGAGTCTTTGCTGAGCCACATATGGGGACCACACATCACAGTCTTCACTCCTGCGGCCTCCCTAAGTGCTaGGATTATAGGCGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: RVFAEPHMGTTHHSLHSCGLPKC*DYRREP
Trigger: TGGCTCACGCCTATAATCCCAGCACTTAGGGAGGCC...GCAGGAGTGAAGACTGTGATGTGTGGTCCCCATATGTGGCTCAGCAAAGACTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp ATGGGGACCACACATCACAGTCTTCACTCCTGCAAGGTCCACAGTCCCGTGCTTCCTTGTTGGCCAGGCTaGTCTCGAACTATTGACCTC +
Preference number: 4 (lower is better)
Translates to: MGTTHHSLHSCKVHSPVLPCWPG*SRTIDL
Trigger: GAGGTCAATAGTTCGAGACCAGCCTGGCCAACAAGG...AAGCACGGGACTGTGGACCTTGCAGGAGTGAAGACTGTGATGTGTGGTCCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR TCA 90 bp GTTCATCTGCCACCCAGGCTTGGTGTTAGGACAGGAGAAAGCAGGCCTGTGGGCCAGCAACAGATGCAATaGGCTTCTCTTCTCCCATAT +
Preference number: 4 (lower is better)
Translates to: VHLPPRLGVRTGESRPVGQQQMQ*ASLLPY
Trigger: ATATGGGAGAAGAGAAGCTCATTGCATCTGTTGCTG...GCCCACAGGCCTGCTTTCTCCTGTCCTAACACCAAGCCTGGGTGGCAGATGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR TCA 90 bp TATGGGGACCACACATCACAGTCTTCACTCCTGCAAGGTCCACAGTCCCGTGCTGTTACCGAGAATCACTaGGGCACCACATGGCAAATC +
Preference number: 4 (lower is better)
Translates to: YGDHTSQSSLLQGPQSRAVTENH*GTTWQI
Trigger: GATTTGCCATGTGGTGCCTCAGTGATTCTCGGTAAC...AGCACGGGACTGTGGACCTTGCAGGAGTGAAGACTGTGATGTGTGGTCCCCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR TCA 90 bp AGCCACATATGGGGACCACACATCACAGTCTTCACTCCTGCAAGGTCCACAGTCGGGCACTGTGCCTTGTaGATGACAGTGAGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: SHIWGPHITVFTPARSTVGHCAL*MTVSGR
Trigger: TCTTCCACTCACTGTCATTCACAAGGCACAGTGCCC...GACTGTGGACCTTGCAGGAGTGAAGACTGTGATGTGTGGTCCCCATATGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR TCA 90 bp GAAAGCAGGCCTGTGGGCTGGAGGCCGTCACAGGGCCGTCAATGCAGACAAAGGTTCTTCATGTTTATCTaGGTACATGGACCCAGAACA +
Preference number: 4 (lower is better)
Translates to: ESRPVGWRPSQGRQCRQRFFMFI*VHGPRT
Trigger: TGTTCTGGGTCCATGTACTCAGATAAACATGAAGAA...CCTTTGTCTGCATTGACGGCCCTGTGACGGCCTCCAGCCCACAGGCCTGCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp GCCACATATGGGGACCACACATCACAGTCTTCACTCCTGCAAGGTCCACAGTCCTGCAATGAAGCCCCCTaGTTCCTCTTCTTTGTGCTC +
Preference number: 4 (lower is better)
Translates to: ATYGDHTSQSSLLQGPQSCNEAP*FLFFVL
Trigger: GAGCACAAAGAAGAGGAAGCAGGGGGCTTCATTGCA...GGACTGTGGACCTTGCAGGAGTGAAGACTGTGATGTGTGGTCCCCATATGTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp AGGCAGCCCGGTGTGGACATAATCACATCTATGGCTACAAGGAACACGCAACAGGACAGGCTCCAGGTTTaGAATGAAGCCCCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: RQPGVDIITSMATRNTQQDRLQV*NEAPCF
Trigger: GAAGCAGGGGGCTTCATTGCAAACCTGGAGCCTGTC...CTGTTGCGTGTTCCTTGTAGCCATAGATGTGATTATGTCCACACCGGGCTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp ATCTGCCACCCAGGCTTGGTGTTAGGACAGGAGAAAGCAGGCCTGTGGGCTGGACTGATGTGGAAGGGATaGTTCATAGCAGTACAGGAT +
Preference number: 4 (lower is better)
Translates to: ICHPGLVLGQEKAGLWAGLMWKG*FIAVQD
Trigger: ATCCTGTACTGCTATGAAGCATCCCTTCCACATCAG...TCCAGCCCACAGGCCTGCTTTCTCCTGTCCTAACACCAAGCCTGGGTGGCAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp TATGGGGACCACACATCACAGTCTTCACTCCTGCAAGGTCCACAGTCCCGTGCTTCACAGGGCCGTCAATaGAGACAAAGGGATGATCTC +
Preference number: 4 (lower is better)
Translates to: YGDHTSQSSLLQGPQSRASQGRQ*RQRDDL
Trigger: GAGATCATCCCTTTGTCTGCATTGACGGCCCTGTGA...AGCACGGGACTGTGGACCTTGCAGGAGTGAAGACTGTGATGTGTGGTCCCCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp TATGGGGACCACACATCACAGTCTTCACTCCTGCAAGGTCCACAGTCCCGTGCTGAAGCACTGTTCATCTaGCACCCAGGCTTGGTGTTA +
Preference number: 4 (lower is better)
Translates to: YGDHTSQSSLLQGPQSRAEALFI*HPGLVL
Trigger: TAACACCAAGCCTGGGTGGCAGATGAACAGTGCTTC...AGCACGGGACTGTGGACCTTGCAGGAGTGAAGACTGTGATGTGTGGTCCCCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp TGCACTTTGAAAGAGCTGAAACTATTCCCTAATACCGGGACTCAGCTGGCAACCAGGCGTGAGCCACCGTaGCTGGCCTGCTTGGTTAAC +
Preference number: 4 (lower is better)
Translates to: CTLKELKLFPNTGTQLATRREPP*LACLVN
Trigger: GTTAACCAAGCAGGCCAGGCACGGTGGCTCACGCCT...GGTTGCCAGCTGAGTCCCGGTATTAGGGAATAGTTTCAGCTCTTTCAAAGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp AAGGCAGCCCGGTGTGGACATAATCACATCTATGGCTACAAGGAACACGCAACAAGGCTTGCGAGCCACTaGAAGCCTCATCTCCATCGC +
Preference number: 4 (lower is better)
Translates to: KAARCGHNHIYGYKEHATRLASH*KPHLHR
Trigger: GCGATGGAGATGAGGCTTCCAGTGGCTCGCAAGCCT...TGTTGCGTGTTCCTTGTAGCCATAGATGTGATTATGTCCACACCGGGCTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp AGCCACATATGGGGACCACACATCACAGTCTTCACTCCTGCAAGGTCCACAGTCAATCCAGCCTGGAGTTaGTCTCCACCTTCCACCTCT +
Preference number: 4 (lower is better)
Translates to: SHIWGPHITVFTPARSTVNPAWS*SPPSTS
Trigger: AGAGGTGGAAGGTGGAGACCAACTCCAGGCTGGATT...GACTGTGGACCTTGCAGGAGTGAAGACTGTGATGTGTGGTCCCCATATGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp ATCTGCCACCCAGGCTTGGTGTTAGGACAGGAGAAAGCAGGCCTGTGGGCTGGATTTGTGCTCAGGTGTTaGGTAAATCCAGATGAAGCC +
Preference number: 4 (lower is better)
Translates to: ICHPGLVLGQEKAGLWAGFVLRC*VNPDEA
Trigger: GGCTTCATCTGGATTTACCCAACACCTGAGCACAAA...TCCAGCCCACAGGCCTGCTTTCTCCTGTCCTAACACCAAGCCTGGGTGGCAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp AGGCAGCCCGGTGTGGACATAATCACATCTATGGCTACAAGGAACACGCAACAGACAGTCCCGTGCTTCTaGAGCACCTCCTTATCCCTC +
Preference number: 4 (lower is better)
Translates to: RQPGVDIITSMATRNTQQTVPCF*STSLSL
Trigger: GAGGGATAAGGAGGTGCTCCAGAAGCACGGGACTGT...CTGTTGCGTGTTCCTTGTAGCCATAGATGTGATTATGTCCACACCGGGCTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp TATGGGGACCACACATCACAGTCTTCACTCCTGCAAGGTCCACAGTCCCGTGCTTTGCTGAGCCACATATaGGGACCACACATCACAGTC +
Preference number: 4 (lower is better)
Translates to: YGDHTSQSSLLQGPQSRALLSHI*GPHITV
Trigger: GACTGTGATGTGTGGTCCCCATATGTGGCTCAGCAA...AGCACGGGACTGTGGACCTTGCAGGAGTGAAGACTGTGATGTGTGGTCCCCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp ATGGGGACCACACATCACAGTCTTCACTCCTGCAAGGTCCACAGTCCCGTGCTTTTGCTGAGCCACATATaGGGACCACACATCACAGTC +
Preference number: 4 (lower is better)
Translates to: MGTTHHSLHSCKVHSPVLLLSHI*GPHITV
Trigger: GACTGTGATGTGTGGTCCCCATATGTGGCTCAGCAA...AAGCACGGGACTGTGGACCTTGCAGGAGTGAAGACTGTGATGTGTGGTCCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp CGAGTCTTTGCTGAGCCACATATGGGGACCACACATCACAGTCTTCACTCCTGCGTGAGCCACCGTGCCTaGCCTGCTTGGTTAACTTTA +
Preference number: 4 (lower is better)
Translates to: RVFAEPHMGTTHHSLHSCVSHRA*PAWLTL
Trigger: TAAAGTTAACCAAGCAGGCCAGGCACGGTGGCTCAC...GCAGGAGTGAAGACTGTGATGTGTGGTCCCCATATGTGGCTCAGCAAAGACTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp GGCCTGTGGGCTGGAGGCCGTCACAGGGCCGTCAATGCAGACAAAGGGATGATCGTTTATCTGAGTACATaGACCCAGAACATTCACTGT +
Preference number: 4 (lower is better)
Translates to: GLWAGGRHRAVNADKGMIVYLST*TQNIHC
Trigger: ACAGTGAATGTTCTGGGTCCATGTACTCAGATAAAC...GATCATCCCTTTGTCTGCATTGACGGCCCTGTGACGGCCTCCAGCCCACAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR TCA 90 bp ATGGGGACCACACATCACAGTCTTCACTCCTGCAAGGTCCACAGTCCCGTGCTTTCTGTTGAACCTCTGTaGTTCGTCCCACTACGATGT +
Preference number: 4 (lower is better)
Translates to: MGTTHHSLHSCKVHSPVLSVEPL*FVPLRC
Trigger: ACATCGTAGTGGGACGAATCACAGAGGTTCAACAGA...AAGCACGGGACTGTGGACCTTGCAGGAGTGAAGACTGTGATGTGTGGTCCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR TCA 90 bp CGAGTCTTTGCTGAGCCACATATGGGGACCACACATCACAGTCTTCACTCCTGCCCACATGGCAAATCATaGAAGTGGGTCTTCTGCCGT +
Preference number: 4 (lower is better)
Translates to: RVFAEPHMGTTHHSLHSCPHGKS*KWVFCR
Trigger: ACGGCAGAAGACCCACTTTCATGATTTGCCATGTGG...GCAGGAGTGAAGACTGTGATGTGTGGTCCCCATATGTGGCTCAGCAAAGACTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp AGCCACATATGGGGACCACACATCACAGTCTTCACTCCTGCAAGGTCCACAGTCTGCAATGAAGCCCCCTaGTTCCTCTTCTTTGTGCTC +
Preference number: 4 (lower is better)
Translates to: SHIWGPHITVFTPARSTVCNEAP*FLFFVL
Trigger: GAGCACAAAGAAGAGGAAGCAGGGGGCTTCATTGCA...GACTGTGGACCTTGCAGGAGTGAAGACTGTGATGTGTGGTCCCCATATGTGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp ATCTCTCGAGTCTTTGCTGAGCCACATATGGGGACCACACATCACAGTCTTCACCACAGTCTTCACTCCTaGAAGGTCCACAGTCCCGTG +
Preference number: 4 (lower is better)
Translates to: ISRVFAEPHMGTTHHSLHHSLHS*KVHSPV
Trigger: CACGGGACTGTGGACCTTGCAGGAGTGAAGACTGTG...GTGAAGACTGTGATGTGTGGTCCCCATATGTGGCTCAGCAAAGACTCGAGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp CGAGTCTTTGCTGAGCCACATATGGGGACCACACATCACAGTCTTCACTCCTGCTCACAGGGCCGTCAATaGAGACAAAGGGATGATCTC +
Preference number: 4 (lower is better)
Translates to: RVFAEPHMGTTHHSLHSCSQGRQ*RQRDDL
Trigger: GAGATCATCCCTTTGTCTGCATTGACGGCCCTGTGA...GCAGGAGTGAAGACTGTGATGTGTGGTCCCCATATGTGGCTCAGCAAAGACTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp CGAGTCTTTGCTGAGCCACATATGGGGACCACACATCACAGTCTTCACTCCTGCGAAGCACTGTTCATCTaGCACCCAGGCTTGGTGTTA +
Preference number: 4 (lower is better)
Translates to: RVFAEPHMGTTHHSLHSCEALFI*HPGLVL
Trigger: TAACACCAAGCCTGGGTGGCAGATGAACAGTGCTTC...GCAGGAGTGAAGACTGTGATGTGTGGTCCCCATATGTGGCTCAGCAAAGACTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp ATGGGGACCACACATCACAGTCTTCACTCCTGCAAGGTCCACAGTCCCGTGCTTTTTCATGGGGCACTGTaGCTTGTGAATGACAGTGAG +
Preference number: 4 (lower is better)
Translates to: MGTTHHSLHSCKVHSPVLFHGAL*LVNDSE
Trigger: CTCACTGTCATTCACAAGGCACAGTGCCCCATGAAA...AAGCACGGGACTGTGGACCTTGCAGGAGTGAAGACTGTGATGTGTGGTCCCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp ATGGGGACCACACATCACAGTCTTCACTCCTGCAAGGTCCACAGTCCCGTGCTTTTTGGAGGTCAGGGATaGCATGTTTTCTATTGGGGC +
Preference number: 4 (lower is better)
Translates to: MGTTHHSLHSCKVHSPVLFGGQG*HVFYWG
Trigger: GCCCCAATAGAAAACATGGCATCCCTGACCTCCAAA...AAGCACGGGACTGTGGACCTTGCAGGAGTGAAGACTGTGATGTGTGGTCCCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp ATGGGGACCACACATCACAGTCTTCACTCCTGCAAGGTCCACAGTCCCGTGCTTCCACCGTGCCTGGCCTaGTTGGTTAACTTTATTCTT +
Preference number: 4 (lower is better)
Translates to: MGTTHHSLHSCKVHSPVLPPCLA*LVNFIL
Trigger: AAGAATAAAGTTAACCAAGCAGGCCAGGCACGGTGG...AAGCACGGGACTGTGGACCTTGCAGGAGTGAAGACTGTGATGTGTGGTCCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp GAAAGCAGGCCTGTGGGCTGGAGGCCGTCACAGGGCCGTCAATGCAGACAAAGGCTTCACCAATGTATCTaGTTTTCAAAGCTTTCACAC +
Preference number: 4 (lower is better)
Translates to: ESRPVGWRPSQGRQCRQRLHQCI*FSKLSH
Trigger: GTGTGAAAGCTTTGAAAACCAGATACATTGGTGAAG...CCTTTGTCTGCATTGACGGCCCTGTGACGGCCTCCAGCCCACAGGCCTGCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp AAGGCAGCCCGGTGTGGACATAATCACATCTATGGCTACAAGGAACACGCAACACTCCAGGAAGGTTCATaGACGAGAGCAGCAAGACCG +
Preference number: 4 (lower is better)
Translates to: KAARCGHNHIYGYKEHATLQEGS*TRAARP
Trigger: CGGTCTTGCTGCTCTCGTCCATGAACCTTCCTGGAG...TGTTGCGTGTTCCTTGTAGCCATAGATGTGATTATGTCCACACCGGGCTGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp AGCCACATATGGGGACCACACATCACAGTCTTCACTCCTGCAAGGTCCACAGTCTCAGAGAACACTGCCTaGACCTCAGCACTGATAAGG +
Preference number: 4 (lower is better)
Translates to: SHIWGPHITVFTPARSTVSENTA*TSALIR
Trigger: CCTTATCAGTGCTGAGGTCCAGGCAGTGTTCTCTGA...GACTGTGGACCTTGCAGGAGTGAAGACTGTGATGTGTGGTCCCCATATGTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
CDS-3UTR CCA 90 bp AAGGCAGCCCGGTGTGGACATAATCACATCTATGGCTACAAGGAACACGCAACAACAGTCCCGTGCTTCTaGAGCACCTCCTTATCCCTC +
Preference number: 4 (lower is better)
Translates to: KAARCGHNHIYGYKEHATTVPCF*STSLSL
Trigger: GAGGGATAAGGAGGTGCTCCAGAAGCACGGGACTGT...TGTTGCGTGTTCCTTGTAGCCATAGATGTGATTATGTCCACACCGGGCTGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp GCCGTCAATGCAGACAAAGGGATGATCTCTCGAGTCTTTGCTGAGCCACATATGACAGTCCCGTGCTTCTaGAGCACCTCCTTATCCCTC +
Preference number: 4 (lower is better)
Translates to: AVNADKGMISRVFAEPHMTVPCF*STSLSL
Trigger: GAGGGATAAGGAGGTGCTCCAGAAGCACGGGACTGT...CATATGTGGCTCAGCAAAGACTCGAGAGATCATCCCTTTGTCTGCATTGACGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp GCCACATATGGGGACCACACATCACAGTCTTCACTCCTGCAAGGTCCACAGTCCATTGGGGCAATTTCATaGGGCACTGTGCCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: ATYGDHTSQSSLLQGPQSIGAIS*GTVPCE
Trigger: TTCACAAGGCACAGTGCCCCATGAAATTGCCCCAAT...GGACTGTGGACCTTGCAGGAGTGAAGACTGTGATGTGTGGTCCCCATATGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp ATGGGGACCACACATCACAGTCTTCACTCCTGCAAGGTCCACAGTCCCGTGCTTCCAAAACAGACCATTTaGAGGTCAGGGATGCCATGT +
Preference number: 4 (lower is better)
Translates to: MGTTHHSLHSCKVHSPVLPKQTI*RSGMPC
Trigger: ACATGGCATCCCTGACCTCCAAATGGTCTGTTTTGG...AAGCACGGGACTGTGGACCTTGCAGGAGTGAAGACTGTGATGTGTGGTCCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR TCA 90 bp GCCACATATGGGGACCACACATCACAGTCTTCACTCCTGCAAGGTCCACAGTCCCAGCAACAGATGCAATaGGCTTCTCTTCTCCCATAT +
Preference number: 4 (lower is better)
Translates to: ATYGDHTSQSSLLQGPQSQQQMQ*ASLLPY
Trigger: ATATGGGAGAAGAGAAGCTCATTGCATCTGTTGCTG...GGACTGTGGACCTTGCAGGAGTGAAGACTGTGATGTGTGGTCCCCATATGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR TCA 90 bp AGGCAGCCCGGTGTGGACATAATCACATCTATGGCTACAAGGAACACGCAACAGCCACATGGCAAATCATaGAAGTGGGTCTTCTGCCGT +
Preference number: 4 (lower is better)
Translates to: RQPGVDIITSMATRNTQQPHGKS*KWVFCR
Trigger: ACGGCAGAAGACCCACTTTCATGATTTGCCATGTGG...CTGTTGCGTGTTCCTTGTAGCCATAGATGTGATTATGTCCACACCGGGCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR TCA 90 bp AGGCAGCCCGGTGTGGACATAATCACATCTATGGCTACAAGGAACACGCAACAGGTTACCGAGAATCACTaGGGCACCACATGGCAAATC +
Preference number: 4 (lower is better)
Translates to: RQPGVDIITSMATRNTQQVTENH*GTTWQI
Trigger: GATTTGCCATGTGGTGCCTCAGTGATTCTCGGTAAC...CTGTTGCGTGTTCCTTGTAGCCATAGATGTGATTATGTCCACACCGGGCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR TCA 90 bp ATGGGGACCACACATCACAGTCTTCACTCCTGCAAGGTCCACAGTCCCGTGCTTTTGGGTAAATCCAGATaGAGCCGTTGTTACCGAGAA +
Preference number: 4 (lower is better)
Translates to: MGTTHHSLHSCKVHSPVLLGKSR*SRCYRE
Trigger: TTCTCGGTAACAACGGCTTCATCTGGATTTACCCAA...AAGCACGGGACTGTGGACCTTGCAGGAGTGAAGACTGTGATGTGTGGTCCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR TCA 90 bp TGCACTTTGAAAGAGCTGAAACTATTCCCTAATACCGGGACTCAGCTGGCAACCGCTCCAGGTTTGCAATaGAGCCCCCTGCTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: CTLKELKLFPNTGTQLATAPGLQ*SPLLPL
Trigger: AAGAGGAAGCAGGGGGCTTCATTGCAAACCTGGAGC...GGTTGCCAGCTGAGTCCCGGTATTAGGGAATAGTTTCAGCTCTTTCAAAGTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR TCA 90 bp GACAGTGAGTGGAAGACAAAGGATTCTCCATATTATTCCAGGATGGGAGCCCATGAGTTACCAGCGAGATaGTGCAGTTCCGAAGCCGGG +
Preference number: 4 (lower is better)
Translates to: DSEWKTKDSPYYSRMGAHELPAR*CSSEAG
Trigger: CCCGGCTTCGGAACTGCATCATCTCGCTGGTAACTC...ATGGGCTCCCATCCTGGAATAATATGGAGAATCCTTTGTCTTCCACTCACTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR TCA 90 bp AGCCACATATGGGGACCACACATCACAGTCTTCACTCCTGCAAGGTCCACAGTCTACAGCATCATCCTCTaGGTTACCAGCGAGATGATG +
Preference number: 4 (lower is better)
Translates to: SHIWGPHITVFTPARSTVYSIIL*VTSEMM
Trigger: CATCATCTCGCTGGTAACTCAGAGGATGATGCTGTA...GACTGTGGACCTTGCAGGAGTGAAGACTGTGATGTGTGGTCCCCATATGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR TCA 90 bp CGAGTCTTTGCTGAGCCACATATGGGGACCACACATCACAGTCTTCACTCCTGCTACAGCATCATCCTCTaGGTTACCAGCGAGATGATG +
Preference number: 4 (lower is better)
Translates to: RVFAEPHMGTTHHSLHSCYSIIL*VTSEMM
Trigger: CATCATCTCGCTGGTAACTCAGAGGATGATGCTGTA...GCAGGAGTGAAGACTGTGATGTGTGGTCCCCATATGTGGCTCAGCAAAGACTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR TCA 90 bp CGAGTCTTTGCTGAGCCACATATGGGGACCACACATCACAGTCTTCACTCCTGCATGCAGACAAAGGGATaGTCTCTCGAGTCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: RVFAEPHMGTTHHSLHSCMQTKG*SLESLL
Trigger: CAGCAAAGACTCGAGAGATCATCCCTTTGTCTGCAT...GCAGGAGTGAAGACTGTGATGTGTGGTCCCCATATGTGGCTCAGCAAAGACTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR TCA 90 bp TACAAGGAACACGCAACAGAAAATCAGATTCCAACCAAGCAAAAGGCTGCTTGTCCATCTTGGCGCCAATaGGTTGCGCAGGCGCAGCTC +
Preference number: 4 (lower is better)
Translates to: YKEHATENQIPTKQKAACPSWRQ*VAQAQL
Trigger: GAGCTGCGCCTGCGCAACTCATTGGCGCCAAGATGG...ACAAGCAGCCTTTTGCTTGGTTGGAATCTGATTTTCTGTTGCGTGTTCCTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546165.5
CDS-3UTR GCA 90 bp AGCCACATATGGGGACCACACATCACAGTCTTCACTCCTGCAAGGTCCACAGTCAGAGCCAGCAACAGATaGAATGAGCTTCTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SHIWGPHITVFTPARSTVRASNR*NELLFS
Trigger: GGAGAAGAGAAGCTCATTGCATCTGTTGCTGGCTCT...GACTGTGGACCTTGCAGGAGTGAAGACTGTGATGTGTGGTCCCCATATGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp AAGGCAGCCCGGTGTGGACATAATCACATCTATGGCTACAAGGAACACGCAACATCCGTCAGAGAACACTaGCTGGACCTCAGCACTGAT +
Preference number: 4 (lower is better)
Translates to: KAARCGHNHIYGYKEHATSVREH*LDLSTD
Trigger: ATCAGTGCTGAGGTCCAGGCAGTGTTCTCTGACGGA...TGTTGCGTGTTCCTTGTAGCCATAGATGTGATTATGTCCACACCGGGCTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
CDS-3UTR GCA 90 bp AAGGCAGCCCGGTGTGGACATAATCACATCTATGGCTACAAGGAACACGCAACATTCAGGCTCCTCGTGTaGAAAGAGACAGCTCCGTCA +
Preference number: 4 (lower is better)
Translates to: KAARCGHNHIYGYKEHATFRLLV*KETAPS
Trigger: TGACGGAGCTGTCTCTTTGCACACGAGGAGCCTGAA...TGTTGCGTGTTCCTTGTAGCCATAGATGTGATTATGTCCACACCGGGCTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
CDS-3UTR GCA 90 bp GCCACATATGGGGACCACACATCACAGTCTTCACTCCTGCAAGGTCCACAGTCCCTGATGTGGAAGGGATaGTTCATAGCAGTACAGGAT +
Preference number: 4 (lower is better)
Translates to: ATYGDHTSQSSLLQGPQSLMWKG*FIAVQD
Trigger: ATCCTGTACTGCTATGAAGCATCCCTTCCACATCAG...GGACTGTGGACCTTGCAGGAGTGAAGACTGTGATGTGTGGTCCCCATATGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp ATGGGGACCACACATCACAGTCTTCACTCCTGCAAGGTCCACAGTCCCGTGCTTCTGATGTGGAAGGGATaGTTCATAGCAGTACAGGAT +
Preference number: 4 (lower is better)
Translates to: MGTTHHSLHSCKVHSPVLLMWKG*FIAVQD
Trigger: ATCCTGTACTGCTATGAAGCATCCCTTCCACATCAG...AAGCACGGGACTGTGGACCTTGCAGGAGTGAAGACTGTGATGTGTGGTCCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp TGCACTTTGAAAGAGCTGAAACTATTCCCTAATACCGGGACTCAGCTGGCAACCCACAGTCTTCACTCCTaGAAGGTCCACAGTCCCGTG +
Preference number: 4 (lower is better)
Translates to: CTLKELKLFPNTGTQLATHSLHS*KVHSPV
Trigger: CACGGGACTGTGGACCTTGCAGGAGTGAAGACTGTG...GGTTGCCAGCTGAGTCCCGGTATTAGGGAATAGTTTCAGCTCTTTCAAAGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp ATCTGCCACCCAGGCTTGGTGTTAGGACAGGAGAAAGCAGGCCTGTGGGCTGGATCGACTGTAACACTGTaGACTTTGAAAGAGCTGAAA +
Preference number: 4 (lower is better)
Translates to: ICHPGLVLGQEKAGLWAGSTVTL*TLKELK
Trigger: TTTCAGCTCTTTCAAAGTGCACAGTGTTACAGTCGA...TCCAGCCCACAGGCCTGCTTTCTCCTGTCCTAACACCAAGCCTGGGTGGCAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp AAAGGATTCTCCATATTATTCCAGGATGGGAGCCCATTCGACTGTAACACTGTGAGGCGTGAGCCACCGTaGCTGGCCTGCTTGGTTAAC +
Preference number: 4 (lower is better)
Translates to: KGFSILFQDGSPFDCNTVRREPP*LACLVN
Trigger: GTTAACCAAGCAGGCCAGGCACGGTGGCTCACGCCT...CACAGTGTTACAGTCGAATGGGCTCCCATCCTGGAATAATATGGAGAATCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp TGCACTTTGAAAGAGCTGAAACTATTCCCTAATACCGGGACTCAGCTGGCAACCCTCCAGGAAGGTTCATaGACGAGAGCAGCAAGACCG +
Preference number: 4 (lower is better)
Translates to: CTLKELKLFPNTGTQLATLQEGS*TRAARP
Trigger: CGGTCTTGCTGCTCTCGTCCATGAACCTTCCTGGAG...GGTTGCCAGCTGAGTCCCGGTATTAGGGAATAGTTTCAGCTCTTTCAAAGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp TATGGGGACCACACATCACAGTCTTCACTCCTGCAAGGTCCACAGTCCCGTGCTTTTGTGCTCAGGTGTTaGGTAAATCCAGATGAAGCC +
Preference number: 4 (lower is better)
Translates to: YGDHTSQSSLLQGPQSRAFVLRC*VNPDEA
Trigger: GGCTTCATCTGGATTTACCCAACACCTGAGCACAAA...AGCACGGGACTGTGGACCTTGCAGGAGTGAAGACTGTGATGTGTGGTCCCCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp ATGGGGACCACACATCACAGTCTTCACTCCTGCAAGGTCCACAGTCCCGTGCTTAGCAGTACAGGATGCTaGTATCATACAGCATCATCC +
Preference number: 4 (lower is better)
Translates to: MGTTHHSLHSCKVHSPVLSSTGC*YHTASS
Trigger: GGATGATGCTGTATGATACCAGCATCCTGTACTGCT...AAGCACGGGACTGTGGACCTTGCAGGAGTGAAGACTGTGATGTGTGGTCCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp AATGCTCCACACTACTTCAATTATAGGATGAAAACAGCTTTGCTTTCCCAGTCTAGCAGGCCTGTGGGCTaGAGGCCGTCACAGGGCCGT +
Preference number: 4 (lower is better)
Translates to: NAPHYFNYRMKTALLSQSSRPVG*RPSQGR
Trigger: ACGGCCCTGTGACGGCCTCCAGCCCACAGGCCTGCT...AGACTGGGAAAGCAAAGCTGTTTTCATCCTATAATTGAAGTAGTGTGGAGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp AGCCACATATGGGGACCACACATCACAGTCTTCACTCCTGCAAGGTCCACAGTCCCAAAACAGACCATTTaGAGGTCAGGGATGCCATGT +
Preference number: 4 (lower is better)
Translates to: SHIWGPHITVFTPARSTVPKQTI*RSGMPC
Trigger: ACATGGCATCCCTGACCTCCAAATGGTCTGTTTTGG...GACTGTGGACCTTGCAGGAGTGAAGACTGTGATGTGTGGTCCCCATATGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp GCCACATATGGGGACCACACATCACAGTCTTCACTCCTGCAAGGTCCACAGTCCCGTGCCTGGCCTGCTTaGTTAACTTTATTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: ATYGDHTSQSSLLQGPQSRAWPA*LTLFFQ
Trigger: TTGGAAGAATAAAGTTAACCAAGCAGGCCAGGCACG...GGACTGTGGACCTTGCAGGAGTGAAGACTGTGATGTGTGGTCCCCATATGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp GCCGTCAATGCAGACAAAGGGATGATCTCTCGAGTCTTTGCTGAGCCACATATGGTGAGCCACCGTGCCTaGCCTGCTTGGTTAACTTTA +
Preference number: 4 (lower is better)
Translates to: AVNADKGMISRVFAEPHMVSHRA*PAWLTL
Trigger: TAAAGTTAACCAAGCAGGCCAGGCACGGTGGCTCAC...CATATGTGGCTCAGCAAAGACTCGAGAGATCATCCCTTTGTCTGCATTGACGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp TGCACTTTGAAAGAGCTGAAACTATTCCCTAATACCGGGACTCAGCTGGCAACCACCCAGGCTGGAGTGTaGTACGCGATTTCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: CTLKELKLFPNTGTQLATTQAGV*YAISAH
Trigger: GTGAGCTGAAATCGCGTACCACACTCCAGCCTGGGT...GGTTGCCAGCTGAGTCCCGGTATTAGGGAATAGTTTCAGCTCTTTCAAAGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp ATCTGCCACCCAGGCTTGGTGTTAGGACAGGAGAAAGCAGGCCTGTGGGCTGGAGTTTATCTGAGTACATaGACCCAGAACATTCACTGT +
Preference number: 4 (lower is better)
Translates to: ICHPGLVLGQEKAGLWAGVYLST*TQNIHC
Trigger: ACAGTGAATGTTCTGGGTCCATGTACTCAGATAAAC...TCCAGCCCACAGGCCTGCTTTCTCCTGTCCTAACACCAAGCCTGGGTGGCAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR TCA 90 bp ATCTCTCGAGTCTTTGCTGAGCCACATATGGGGACCACACATCACAGTCTTCACCCACATGGCAAATCATaGAAGTGGGTCTTCTGCCGT +
Preference number: 4 (lower is better)
Translates to: ISRVFAEPHMGTTHHSLHPHGKS*KWVFCR
Trigger: ACGGCAGAAGACCCACTTTCATGATTTGCCATGTGG...GTGAAGACTGTGATGTGTGGTCCCCATATGTGGCTCAGCAAAGACTCGAGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR TCA 90 bp GACAGTGAGTGGAAGACAAAGGATTCTCCATATTATTCCAGGATGGGAGCCCATGCTCCAGGTTTGCAATaGAGCCCCCTGCTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: DSEWKTKDSPYYSRMGAHAPGLQ*SPLLPL
Trigger: AAGAGGAAGCAGGGGGCTTCATTGCAAACCTGGAGC...ATGGGCTCCCATCCTGGAATAATATGGAGAATCCTTTGTCTTCCACTCACTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR TCA 90 bp GCCACATATGGGGACCACACATCACAGTCTTCACTCCTGCAAGGTCCACAGTCCGCTTTAAGATGTCTTTaGTCTGATGTGGAAGGGATG +
Preference number: 4 (lower is better)
Translates to: ATYGDHTSQSSLLQGPQSALRCL*SDVEGM
Trigger: CATCCCTTCCACATCAGATCAAAGACATCTTAAAGC...GGACTGTGGACCTTGCAGGAGTGAAGACTGTGATGTGTGGTCCCCATATGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR TCA 90 bp GTTCATCTGCCACCCAGGCTTGGTGTTAGGACAGGAGAAAGCAGGCCTGTGGGCACTTCAATTATAGGATaGAAACAGCTTTGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: VHLPPRLGVRTGESRPVGTSIIG*KQLCFP
Trigger: GGGAAAGCAAAGCTGTTTTCATCCTATAATTGAAGT...GCCCACAGGCCTGCTTTCTCCTGTCCTAACACCAAGCCTGGGTGGCAGATGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR TCA 90 bp ATCTGCCACCCAGGCTTGGTGTTAGGACAGGAGAAAGCAGGCCTGTGGGCTGGAACTTCAATTATAGGATaGAAACAGCTTTGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: ICHPGLVLGQEKAGLWAGTSIIG*KQLCFP
Trigger: GGGAAAGCAAAGCTGTTTTCATCCTATAATTGAAGT...TCCAGCCCACAGGCCTGCTTTCTCCTGTCCTAACACCAAGCCTGGGTGGCAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp ATCTCTCGAGTCTTTGCTGAGCCACATATGGGGACCACACATCACAGTCTTCACTGCAATGAAGCCCCCTaGTTCCTCTTCTTTGTGCTC +
Preference number: 4 (lower is better)
Translates to: ISRVFAEPHMGTTHHSLHCNEAP*FLFFVL
Trigger: GAGCACAAAGAAGAGGAAGCAGGGGGCTTCATTGCA...GTGAAGACTGTGATGTGTGGTCCCCATATGTGGCTCAGCAAAGACTCGAGAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp AGGATGGGAGCCCATTCGACTGTAACACTGTGCACTTTGAAAGAGCTGAAACTACACAGTCTTCACTCCTaGAAGGTCCACAGTCCCGTG +
Preference number: 4 (lower is better)
Translates to: RMGAHSTVTLCTLKELKLHSLHS*KVHSPV
Trigger: CACGGGACTGTGGACCTTGCAGGAGTGAAGACTGTG...TAGTTTCAGCTCTTTCAAAGTGCACAGTGTTACAGTCGAATGGGCTCCCATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp GCCGTCAATGCAGACAAAGGGATGATCTCTCGAGTCTTTGCTGAGCCACATATGTCACAGGGCCGTCAATaGAGACAAAGGGATGATCTC +
Preference number: 4 (lower is better)
Translates to: AVNADKGMISRVFAEPHMSQGRQ*RQRDDL
Trigger: GAGATCATCCCTTTGTCTGCATTGACGGCCCTGTGA...CATATGTGGCTCAGCAAAGACTCGAGAGATCATCCCTTTGTCTGCATTGACGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp ATCTGCCACCCAGGCTTGGTGTTAGGACAGGAGAAAGCAGGCCTGTGGGCTGGATCCAACTTTACCAGCTaGATTCTCAGTCATTTAAAG +
Preference number: 4 (lower is better)
Translates to: ICHPGLVLGQEKAGLWAGSNFTS*ILSHLK
Trigger: CTTTAAATGACTGAGAATGCAGCTGGTAAAGTTGGA...TCCAGCCCACAGGCCTGCTTTCTCCTGTCCTAACACCAAGCCTGGGTGGCAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp ATCTGCCACCCAGGCTTGGTGTTAGGACAGGAGAAAGCAGGCCTGTGGGCTGGACTTCACCAATGTATCTaGTTTTCAAAGCTTTCACAC +
Preference number: 4 (lower is better)
Translates to: ICHPGLVLGQEKAGLWAGLHQCI*FSKLSH
Trigger: GTGTGAAAGCTTTGAAAACCAGATACATTGGTGAAG...TCCAGCCCACAGGCCTGCTTTCTCCTGTCCTAACACCAAGCCTGGGTGGCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp AGCCACATATGGGGACCACACATCACAGTCTTCACTCCTGCAAGGTCCACAGTCTGTTCCAAAAGCCTCTaGCGTGTTTCCATCACAATC +
Preference number: 4 (lower is better)
Translates to: SHIWGPHITVFTPARSTVCSKSL*RVSITI
Trigger: GATTGTGATGGAAACACGCCAGAGGCTTTTGGAACA...GACTGTGGACCTTGCAGGAGTGAAGACTGTGATGTGTGGTCCCCATATGTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp AAGGCAGCCCGGTGTGGACATAATCACATCTATGGCTACAAGGAACACGCAACATTGCTGAGCCACATATaGGGACCACACATCACAGTC +
Preference number: 4 (lower is better)
Translates to: KAARCGHNHIYGYKEHATLLSHI*GPHITV
Trigger: GACTGTGATGTGTGGTCCCCATATGTGGCTCAGCAA...TGTTGCGTGTTCCTTGTAGCCATAGATGTGATTATGTCCACACCGGGCTGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp AGGATGGGAGCCCATTCGACTGTAACACTGTGCACTTTGAAAGAGCTGAAACTAACCCAGGCTGGAGTGTaGTACGCGATTTCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: RMGAHSTVTLCTLKELKLTQAGV*YAISAH
Trigger: GTGAGCTGAAATCGCGTACCACACTCCAGCCTGGGT...TAGTTTCAGCTCTTTCAAAGTGCACAGTGTTACAGTCGAATGGGCTCCCATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR TCA 90 bp CTCAGTCATTTAAAGGATATAGGAATGGAGGCCAAAACAGACCATTTGGAGGTCGAGTTACCAGCGAGATaGTGCAGTTCCGAAGCCGGG +
Preference number: 4 (lower is better)
Translates to: LSHLKDIGMEAKTDHLEVELPAR*CSSEAG
Trigger: CCCGGCTTCGGAACTGCATCATCTCGCTGGTAACTC...GACCTCCAAATGGTCTGTTTTGGCCTCCATTCCTATATCCTTTAAATGACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR TCA 90 bp GCCGTCAATGCAGACAAAGGGATGATCTCTCGAGTCTTTGCTGAGCCACATATGATGCAGACAAAGGGATaGTCTCTCGAGTCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: AVNADKGMISRVFAEPHMMQTKG*SLESLL
Trigger: CAGCAAAGACTCGAGAGATCATCCCTTTGTCTGCAT...CATATGTGGCTCAGCAAAGACTCGAGAGATCATCCCTTTGTCTGCATTGACGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp AAGGCAGCCCGGTGTGGACATAATCACATCTATGGCTACAAGGAACACGCAACAAGAGCCAGCAACAGATaGAATGAGCTTCTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: KAARCGHNHIYGYKEHATRASNR*NELLFS
Trigger: GGAGAAGAGAAGCTCATTGCATCTGTTGCTGGCTCT...TGTTGCGTGTTCCTTGTAGCCATAGATGTGATTATGTCCACACCGGGCTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp ATCTCTCGAGTCTTTGCTGAGCCACATATGGGGACCACACATCACAGTCTTCACAGAGCCAGCAACAGATaGAATGAGCTTCTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: ISRVFAEPHMGTTHHSLHRASNR*NELLFS
Trigger: GGAGAAGAGAAGCTCATTGCATCTGTTGCTGGCTCT...GTGAAGACTGTGATGTGTGGTCCCCATATGTGGCTCAGCAAAGACTCGAGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp AGGATGGGAGCCCATTCGACTGTAACACTGTGCACTTTGAAAGAGCTGAAACTATTCAGGCTCCTCGTGTaGAAAGAGACAGCTCCGTCA +
Preference number: 4 (lower is better)
Translates to: RMGAHSTVTLCTLKELKLFRLLV*KETAPS
Trigger: TGACGGAGCTGTCTCTTTGCACACGAGGAGCCTGAA...TAGTTTCAGCTCTTTCAAAGTGCACAGTGTTACAGTCGAATGGGCTCCCATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
CDS-3UTR GCA 90 bp GCCGTCAATGCAGACAAAGGGATGATCTCTCGAGTCTTTGCTGAGCCACATATGTTTGGAGGTCAGGGATaGCATGTTTTCTATTGGGGC +
Preference number: 4 (lower is better)
Translates to: AVNADKGMISRVFAEPHMFGGQG*HVFYWG
Trigger: GCCCCAATAGAAAACATGGCATCCCTGACCTCCAAA...CATATGTGGCTCAGCAAAGACTCGAGAGATCATCCCTTTGTCTGCATTGACGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp CTCAGTCATTTAAAGGATATAGGAATGGAGGCCAAAACAGACCATTTGGAGGTCAGGCTTGCGAGCCACTaGAAGCCTCATCTCCATCGC +
Preference number: 4 (lower is better)
Translates to: LSHLKDIGMEAKTDHLEVRLASH*KPHLHR
Trigger: GCGATGGAGATGAGGCTTCCAGTGGCTCGCAAGCCT...GACCTCCAAATGGTCTGTTTTGGCCTCCATTCCTATATCCTTTAAATGACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp CGAGTCTTTGCTGAGCCACATATGGGGACCACACATCACAGTCTTCACTCCTGCGTCTTTGATCTGATGTaGAAGGGATGCTTCATAGCA +
Preference number: 4 (lower is better)
Translates to: RVFAEPHMGTTHHSLHSCVFDLM*KGCFIA
Trigger: TGCTATGAAGCATCCCTTCCACATCAGATCAAAGAC...GCAGGAGTGAAGACTGTGATGTGTGGTCCCCATATGTGGCTCAGCAAAGACTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp AGGCAGCCCGGTGTGGACATAATCACATCTATGGCTACAAGGAACACGCAACAGTGTTCCAAAAGCCTCTaGCGTGTTTCCATCACAATC +
Preference number: 4 (lower is better)
Translates to: RQPGVDIITSMATRNTQQCSKSL*RVSITI
Trigger: GATTGTGATGGAAACACGCCAGAGGCTTTTGGAACA...CTGTTGCGTGTTCCTTGTAGCCATAGATGTGATTATGTCCACACCGGGCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp AGGCAGCCCGGTGTGGACATAATCACATCTATGGCTACAAGGAACACGCAACAGCGTGCCTGGCCTGCTTaGTTAACTTTATTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: RQPGVDIITSMATRNTQQRAWPA*LTLFFQ
Trigger: TTGGAAGAATAAAGTTAACCAAGCAGGCCAGGCACG...CTGTTGCGTGTTCCTTGTAGCCATAGATGTGATTATGTCCACACCGGGCTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp AAAGGATTCTCCATATTATTCCAGGATGGGAGCCCATTCGACTGTAACACTGTGGGCCTCCCTAAGTGCTaGGATTATAGGCGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: KGFSILFQDGSPFDCNTVGLPKC*DYRREP
Trigger: TGGCTCACGCCTATAATCCCAGCACTTAGGGAGGCC...CACAGTGTTACAGTCGAATGGGCTCCCATCCTGGAATAATATGGAGAATCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp AACAGACCATTTGGAGGTCAGGGATGCCATGTTTTCTATTGGGGCAATTTCATGACCCAGGCTGGAGTGTaGTACGCGATTTCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: NRPFGGQGCHVFYWGNFMTQAGV*YAISAH
Trigger: GTGAGCTGAAATCGCGTACCACACTCCAGCCTGGGT...CATGAAATTGCCCCAATAGAAAACATGGCATCCCTGACCTCCAAATGGTCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp AACAGACCATTTGGAGGTCAGGGATGCCATGTTTTCTATTGGGGCAATTTCATGCTCTGTCACCCAGGCTaGAGTGTGGTACGCGATTTC +
Preference number: 4 (lower is better)
Translates to: NRPFGGQGCHVFYWGNFMLCHPG*SVVRDF
Trigger: GAAATCGCGTACCACACTCCAGCCTGGGTGACAGAG...CATGAAATTGCCCCAATAGAAAACATGGCATCCCTGACCTCCAAATGGTCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp TATGGGGACCACACATCACAGTCTTCACTCCTGCAAGGTCCACAGTCCCGTGCTGTTTATCTGAGTACATaGACCCAGAACATTCACTGT +
Preference number: 4 (lower is better)
Translates to: YGDHTSQSSLLQGPQSRAVYLST*TQNIHC
Trigger: ACAGTGAATGTTCTGGGTCCATGTACTCAGATAAAC...AGCACGGGACTGTGGACCTTGCAGGAGTGAAGACTGTGATGTGTGGTCCCCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR TCA 90 bp ATCTCTCGAGTCTTTGCTGAGCCACATATGGGGACCACACATCACAGTCTTCACCAGCAACAGATGCAATaGGCTTCTCTTCTCCCATAT +
Preference number: 4 (lower is better)
Translates to: ISRVFAEPHMGTTHHSLHQQQMQ*ASLLPY
Trigger: ATATGGGAGAAGAGAAGCTCATTGCATCTGTTGCTG...GTGAAGACTGTGATGTGTGGTCCCCATATGTGGCTCAGCAAAGACTCGAGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR TCA 90 bp AGGCAGCCCGGTGTGGACATAATCACATCTATGGCTACAAGGAACACGCAACAGGCTTTAAGATGTCTTTaGTCTGATGTGGAAGGGATG +
Preference number: 4 (lower is better)
Translates to: RQPGVDIITSMATRNTQQALRCL*SDVEGM
Trigger: CATCCCTTCCACATCAGATCAAAGACATCTTAAAGC...CTGTTGCGTGTTCCTTGTAGCCATAGATGTGATTATGTCCACACCGGGCTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR TCA 90 bp TGCACTTTGAAAGAGCTGAAACTATTCCCTAATACCGGGACTCAGCTGGCAACCATGCAGACAAAGGGATaGTCTCTCGAGTCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: CTLKELKLFPNTGTQLATMQTKG*SLESLL
Trigger: CAGCAAAGACTCGAGAGATCATCCCTTTGTCTGCAT...GGTTGCCAGCTGAGTCCCGGTATTAGGGAATAGTTTCAGCTCTTTCAAAGTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR TCA 90 bp AAAGGATTCTCCATATTATTCCAGGATGGGAGCCCATTCGACTGTAACACTGTGGGGCACTGTGCCTTGTaGATGACAGTGAGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: KGFSILFQDGSPFDCNTVGHCAL*MTVSGR
Trigger: TCTTCCACTCACTGTCATTCACAAGGCACAGTGCCC...CACAGTGTTACAGTCGAATGGGCTCCCATCCTGGAATAATATGGAGAATCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR TCA 90 bp CGAGTCTTTGCTGAGCCACATATGGGGACCACACATCACAGTCTTCACTCCTGCTTCTTCATGTTTATCTaGGTACATGGACCCAGAACA +
Preference number: 4 (lower is better)
Translates to: RVFAEPHMGTTHHSLHSCFFMFI*VHGPRT
Trigger: TGTTCTGGGTCCATGTACTCAGATAAACATGAAGAA...GCAGGAGTGAAGACTGTGATGTGTGGTCCCCATATGTGGCTCAGCAAAGACTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp TGCACTTTGAAAGAGCTGAAACTATTCCCTAATACCGGGACTCAGCTGGCAACCTTTGGAGGTCAGGGATaGCATGTTTTCTATTGGGGC +
Preference number: 4 (lower is better)
Translates to: CTLKELKLFPNTGTQLATFGGQG*HVFYWG
Trigger: GCCCCAATAGAAAACATGGCATCCCTGACCTCCAAA...GGTTGCCAGCTGAGTCCCGGTATTAGGGAATAGTTTCAGCTCTTTCAAAGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp AATGCTCCACACTACTTCAATTATAGGATGAAAACAGCTTTGCTTTCCCAGTCTAGGCGTGAGCCACCGTaGCTGGCCTGCTTGGTTAAC +
Preference number: 4 (lower is better)
Translates to: NAPHYFNYRMKTALLSQSRREPP*LACLVN
Trigger: GTTAACCAAGCAGGCCAGGCACGGTGGCTCACGCCT...AGACTGGGAAAGCAAAGCTGTTTTCATCCTATAATTGAAGTAGTGTGGAGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp AACAATGCACAGGAATTCTCACATTCTTCAGCGAGAACTCTGGCGTCTTTTTATAGGCTTGCGAGCCACTaGAAGCCTCATCTCCATCGC +
Preference number: 4 (lower is better)
Translates to: NNAQEFSHSSARTLASFYRLASH*KPHLHR
Trigger: GCGATGGAGATGAGGCTTCCAGTGGCTCGCAAGCCT...ATAAAAAGACGCCAGAGTTCTCGCTGAAGAATGTGAGAATTCCTGTGCATTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp GACAGTGAGTGGAAGACAAAGGATTCTCCATATTATTCCAGGATGGGAGCCCATTCAGAGAACACTGCCTaGACCTCAGCACTGATAAGG +
Preference number: 4 (lower is better)
Translates to: DSEWKTKDSPYYSRMGAHSENTA*TSALIR
Trigger: CCTTATCAGTGCTGAGGTCCAGGCAGTGTTCTCTGA...ATGGGCTCCCATCCTGGAATAATATGGAGAATCCTTTGTCTTCCACTCACTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
CDS-3UTR CCA 90 bp GCCGTCAATGCAGACAAAGGGATGATCTCTCGAGTCTTTGCTGAGCCACATATGTTTGTGCTCAGGTGTTaGGTAAATCCAGATGAAGCC +
Preference number: 4 (lower is better)
Translates to: AVNADKGMISRVFAEPHMFVLRC*VNPDEA
Trigger: GGCTTCATCTGGATTTACCCAACACCTGAGCACAAA...CATATGTGGCTCAGCAAAGACTCGAGAGATCATCCCTTTGTCTGCATTGACGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp GCCGTCAATGCAGACAAAGGGATGATCTCTCGAGTCTTTGCTGAGCCACATATGAGCAGTACAGGATGCTaGTATCATACAGCATCATCC +
Preference number: 4 (lower is better)
Translates to: AVNADKGMISRVFAEPHMSSTGC*YHTASS
Trigger: GGATGATGCTGTATGATACCAGCATCCTGTACTGCT...CATATGTGGCTCAGCAAAGACTCGAGAGATCATCCCTTTGTCTGCATTGACGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp AACAGACCATTTGGAGGTCAGGGATGCCATGTTTTCTATTGGGGCAATTTCATGCCTTGTTGGCCAGGCTaGTCTCGAACTATTGACCTC +
Preference number: 4 (lower is better)
Translates to: NRPFGGQGCHVFYWGNFMPCWPG*SRTIDL
Trigger: GAGGTCAATAGTTCGAGACCAGCCTGGCCAACAAGG...CATGAAATTGCCCCAATAGAAAACATGGCATCCCTGACCTCCAAATGGTCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR TCA 90 bp TGCACTTTGAAAGAGCTGAAACTATTCCCTAATACCGGGACTCAGCTGGCAACCTTGGGTAAATCCAGATaGAGCCGTTGTTACCGAGAA +
Preference number: 4 (lower is better)
Translates to: CTLKELKLFPNTGTQLATLGKSR*SRCYRE
Trigger: TTCTCGGTAACAACGGCTTCATCTGGATTTACCCAA...GGTTGCCAGCTGAGTCCCGGTATTAGGGAATAGTTTCAGCTCTTTCAAAGTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR TCA 90 bp TACAAGGAACACGCAACAGAAAATCAGATTCCAACCAAGCAAAAGGCTGCTTGTGGGCACTGTGCCTTGTaGATGACAGTGAGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: YKEHATENQIPTKQKAACGHCAL*MTVSGR
Trigger: TCTTCCACTCACTGTCATTCACAAGGCACAGTGCCC...ACAAGCAGCCTTTTGCTTGGTTGGAATCTGATTTTCTGTTGCGTGTTCCTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp CTCAGTCATTTAAAGGATATAGGAATGGAGGCCAAAACAGACCATTTGGAGGTCTTCAGGCTCCTCGTGTaGAAAGAGACAGCTCCGTCA +
Preference number: 4 (lower is better)
Translates to: LSHLKDIGMEAKTDHLEVFRLLV*KETAPS
Trigger: TGACGGAGCTGTCTCTTTGCACACGAGGAGCCTGAA...GACCTCCAAATGGTCTGTTTTGGCCTCCATTCCTATATCCTTTAAATGACTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
CDS-3UTR GCA 90 bp AACAATGCACAGGAATTCTCACATTCTTCAGCGAGAACTCTGGCGTCTTTTTATGACAGGCTCCAGGTTTaGAATGAAGCCCCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: NNAQEFSHSSARTLASFYDRLQV*NEAPCF
Trigger: GAAGCAGGGGGCTTCATTGCAAACCTGGAGCCTGTC...ATAAAAAGACGCCAGAGTTCTCGCTGAAGAATGTGAGAATTCCTGTGCATTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp TCTCAGTCATTTAAAGGATATAGGAATGGAGGCCAAAACAGACCATTTGGAGGTAGGTCCACAGTCCCGTaGTTCTGGAGCACCTCCTTA +
Preference number: 4 (lower is better)
Translates to: SQSFKGYRNGGQNRPFGGRSTVP*FWSTSL
Trigger: TAAGGAGGTGCTCCAGAAGCACGGGACTGTGGACCT...ACCTCCAAATGGTCTGTTTTGGCCTCCATTCCTATATCCTTTAAATGACTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp AACAGACCATTTGGAGGTCAGGGATGCCATGTTTTCTATTGGGGCAATTTCATGTCACAGGGCCGTCAATaGAGACAAAGGGATGATCTC +
Preference number: 4 (lower is better)
Translates to: NRPFGGQGCHVFYWGNFMSQGRQ*RQRDDL
Trigger: GAGATCATCCCTTTGTCTGCATTGACGGCCCTGTGA...CATGAAATTGCCCCAATAGAAAACATGGCATCCCTGACCTCCAAATGGTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp AACAGACCATTTGGAGGTCAGGGATGCCATGTTTTCTATTGGGGCAATTTCATGGAAGCACTGTTCATCTaGCACCCAGGCTTGGTGTTA +
Preference number: 4 (lower is better)
Translates to: NRPFGGQGCHVFYWGNFMEALFI*HPGLVL
Trigger: TAACACCAAGCCTGGGTGGCAGATGAACAGTGCTTC...CATGAAATTGCCCCAATAGAAAACATGGCATCCCTGACCTCCAAATGGTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp AGGATGGGAGCCCATTCGACTGTAACACTGTGCACTTTGAAAGAGCTGAAACTACCACCGTGCCTGGCCTaGTTGGTTAACTTTATTCTT +
Preference number: 4 (lower is better)
Translates to: RMGAHSTVTLCTLKELKLPPCLA*LVNFIL
Trigger: AAGAATAAAGTTAACCAAGCAGGCCAGGCACGGTGG...TAGTTTCAGCTCTTTCAAAGTGCACAGTGTTACAGTCGAATGGGCTCCCATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp CGAGTCTTTGCTGAGCCACATATGGGGACCACACATCACAGTCTTCACTCCTGCCTTCACCAATGTATCTaGTTTTCAAAGCTTTCACAC +
Preference number: 4 (lower is better)
Translates to: RVFAEPHMGTTHHSLHSCLHQCI*FSKLSH
Trigger: GTGTGAAAGCTTTGAAAACCAGATACATTGGTGAAG...GCAGGAGTGAAGACTGTGATGTGTGGTCCCCATATGTGGCTCAGCAAAGACTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp GACAGTGAGTGGAAGACAAAGGATTCTCCATATTATTCCAGGATGGGAGCCCATATTGGGGCAATTTCATaGGGCACTGTGCCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: DSEWKTKDSPYYSRMGAHIGAIS*GTVPCE
Trigger: TTCACAAGGCACAGTGCCCCATGAAATTGCCCCAAT...ATGGGCTCCCATCCTGGAATAATATGGAGAATCCTTTGTCTTCCACTCACTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp TGCACTTTGAAAGAGCTGAAACTATTCCCTAATACCGGGACTCAGCTGGCAACCCGTGCCTGGCCTGCTTaGTTAACTTTATTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: CTLKELKLFPNTGTQLATRAWPA*LTLFFQ
Trigger: TTGGAAGAATAAAGTTAACCAAGCAGGCCAGGCACG...GGTTGCCAGCTGAGTCCCGGTATTAGGGAATAGTTTCAGCTCTTTCAAAGTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp TACAAGGAACACGCAACAGAAAATCAGATTCCAACCAAGCAAAAGGCTGCTTGTGTGAGCCACCGTGCCTaGCCTGCTTGGTTAACTTTA +
Preference number: 4 (lower is better)
Translates to: YKEHATENQIPTKQKAACVSHRA*PAWLTL
Trigger: TAAAGTTAACCAAGCAGGCCAGGCACGGTGGCTCAC...ACAAGCAGCCTTTTGCTTGGTTGGAATCTGATTTTCTGTTGCGTGTTCCTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp TACAAGGAACACGCAACAGAAAATCAGATTCCAACCAAGCAAAAGGCTGCTTGTCCTTGTTGGCCAGGCTaGTCTCGAACTATTGACCTC +
Preference number: 4 (lower is better)
Translates to: YKEHATENQIPTKQKAACPCWPG*SRTIDL
Trigger: GAGGTCAATAGTTCGAGACCAGCCTGGCCAACAAGG...ACAAGCAGCCTTTTGCTTGGTTGGAATCTGATTTTCTGTTGCGTGTTCCTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp AACAATGCACAGGAATTCTCACATTCTTCAGCGAGAACTCTGGCGTCTTTTTATACCCAGGCTGGAGTGTaGTACGCGATTTCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: NNAQEFSHSSARTLASFYTQAGV*YAISAH
Trigger: GTGAGCTGAAATCGCGTACCACACTCCAGCCTGGGT...ATAAAAAGACGCCAGAGTTCTCGCTGAAGAATGTGAGAATTCCTGTGCATTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372358.10
ENST00000546165.5
3UTR CAA 72 bp AGGATGGGAGCCCATTCGACTGTAACACTGTGCACTTaGAAAGAGCTGAAACTATTCCCTAATACCGGGACT +
Preference number: 4 (lower is better)
Translates to: RMGAHSTVTLCT*KELKLFPNTGT
Trigger: AGTCCCGGTATTAGGGAATAGTTTCAGCTCTTTCAAAGTGCACAGTGTTACAGTCGAATGGGCTCCCATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR TCA 90 bp AGGATGGGAGCCCATTCGACTGTAACACTGTGCACTTTGAAAGAGCTGAAACTACAGCAACAGATGCAATaGGCTTCTCTTCTCCCATAT +
Preference number: 4 (lower is better)
Translates to: RMGAHSTVTLCTLKELKLQQQMQ*ASLLPY
Trigger: ATATGGGAGAAGAGAAGCTCATTGCATCTGTTGCTG...TAGTTTCAGCTCTTTCAAAGTGCACAGTGTTACAGTCGAATGGGCTCCCATCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR TCA 90 bp CTCAGTCATTTAAAGGATATAGGAATGGAGGCCAAAACAGACCATTTGGAGGTCCCACATGGCAAATCATaGAAGTGGGTCTTCTGCCGT +
Preference number: 4 (lower is better)
Translates to: LSHLKDIGMEAKTDHLEVPHGKS*KWVFCR
Trigger: ACGGCAGAAGACCCACTTTCATGATTTGCCATGTGG...GACCTCCAAATGGTCTGTTTTGGCCTCCATTCCTATATCCTTTAAATGACTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR TCA 90 bp TACAAGGAACACGCAACAGAAAATCAGATTCCAACCAAGCAAAAGGCTGCTTGTGTTACCGAGAATCACTaGGGCACCACATGGCAAATC +
Preference number: 4 (lower is better)
Translates to: YKEHATENQIPTKQKAACVTENH*GTTWQI
Trigger: GATTTGCCATGTGGTGCCTCAGTGATTCTCGGTAAC...ACAAGCAGCCTTTTGCTTGGTTGGAATCTGATTTTCTGTTGCGTGTTCCTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR TCA 90 bp GACAGTGAGTGGAAGACAAAGGATTCTCCATATTATTCCAGGATGGGAGCCCATTTGGGTAAATCCAGATaGAGCCGTTGTTACCGAGAA +
Preference number: 4 (lower is better)
Translates to: DSEWKTKDSPYYSRMGAHLGKSR*SRCYRE
Trigger: TTCTCGGTAACAACGGCTTCATCTGGATTTACCCAA...ATGGGCTCCCATCCTGGAATAATATGGAGAATCCTTTGTCTTCCACTCACTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR TCA 90 bp AATGCTCCACACTACTTCAATTATAGGATGAAAACAGCTTTGCTTTCCCAGTCTGCTCCAGGTTTGCAATaGAGCCCCCTGCTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: NAPHYFNYRMKTALLSQSAPGLQ*SPLLPL
Trigger: AAGAGGAAGCAGGGGGCTTCATTGCAAACCTGGAGC...AGACTGGGAAAGCAAAGCTGTTTTCATCCTATAATTGAAGTAGTGTGGAGCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR TCA 90 bp AGGCAGCCCGGTGTGGACATAATCACATCTATGGCTACAAGGAACACGCAACAGACTTCAATTATAGGATaGAAACAGCTTTGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: RQPGVDIITSMATRNTQQTSIIG*KQLCFP
Trigger: GGGAAAGCAAAGCTGTTTTCATCCTATAATTGAAGT...CTGTTGCGTGTTCCTTGTAGCCATAGATGTGATTATGTCCACACCGGGCTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp AATGCTCCACACTACTTCAATTATAGGATGAAAACAGCTTTGCTTTCCCAGTCTAGGTCCACAGTCCCGTaGTTCTGGAGCACCTCCTTA +
Preference number: 4 (lower is better)
Translates to: NAPHYFNYRMKTALLSQSRSTVP*FWSTSL
Trigger: TAAGGAGGTGCTCCAGAAGCACGGGACTGTGGACCT...AGACTGGGAAAGCAAAGCTGTTTTCATCCTATAATTGAAGTAGTGTGGAGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp TACAAGGAACACGCAACAGAAAATCAGATTCCAACCAAGCAAAAGGCTGCTTGTGAAGCACTGTTCATCTaGCACCCAGGCTTGGTGTTA +
Preference number: 4 (lower is better)
Translates to: YKEHATENQIPTKQKAACEALFI*HPGLVL
Trigger: TAACACCAAGCCTGGGTGGCAGATGAACAGTGCTTC...ACAAGCAGCCTTTTGCTTGGTTGGAATCTGATTTTCTGTTGCGTGTTCCTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp AAGGCAGCCCGGTGTGGACATAATCACATCTATGGCTACAAGGAACACGCAACATCGACTGTAACACTGTaGACTTTGAAAGAGCTGAAA +
Preference number: 4 (lower is better)
Translates to: KAARCGHNHIYGYKEHATSTVTL*TLKELK
Trigger: TTTCAGCTCTTTCAAAGTGCACAGTGTTACAGTCGA...TGTTGCGTGTTCCTTGTAGCCATAGATGTGATTATGTCCACACCGGGCTGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp GCCGTCAATGCAGACAAAGGGATGATCTCTCGAGTCTTTGCTGAGCCACATATGTCGACTGTAACACTGTaGACTTTGAAAGAGCTGAAA +
Preference number: 4 (lower is better)
Translates to: AVNADKGMISRVFAEPHMSTVTL*TLKELK
Trigger: TTTCAGCTCTTTCAAAGTGCACAGTGTTACAGTCGA...CATATGTGGCTCAGCAAAGACTCGAGAGATCATCCCTTTGTCTGCATTGACGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp AAAGGATTCTCCATATTATTCCAGGATGGGAGCCCATTCGACTGTAACACTGTGTTTCATGGGGCACTGTaGCTTGTGAATGACAGTGAG +
Preference number: 4 (lower is better)
Translates to: KGFSILFQDGSPFDCNTVFHGAL*LVNDSE
Trigger: CTCACTGTCATTCACAAGGCACAGTGCCCCATGAAA...CACAGTGTTACAGTCGAATGGGCTCCCATCCTGGAATAATATGGAGAATCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp AACAGACCATTTGGAGGTCAGGGATGCCATGTTTTCTATTGGGGCAATTTCATGTTTGGAGGTCAGGGATaGCATGTTTTCTATTGGGGC +
Preference number: 4 (lower is better)
Translates to: NRPFGGQGCHVFYWGNFMFGGQG*HVFYWG
Trigger: GCCCCAATAGAAAACATGGCATCCCTGACCTCCAAA...CATGAAATTGCCCCAATAGAAAACATGGCATCCCTGACCTCCAAATGGTCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp TCTCAGTCATTTAAAGGATATAGGAATGGAGGCCAAAACAGACCATTTGGAGGTCCCATATACGTTCCATaGCCCCGCATGAATCCTGTG +
Preference number: 4 (lower is better)
Translates to: SQSFKGYRNGGQNRPFGGPIYVP*PRMNPV
Trigger: CACAGGATTCATGCGGGGCCATGGAACGTATATGGG...ACCTCCAAATGGTCTGTTTTGGCCTCCATTCCTATATCCTTTAAATGACTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp TGCACTTTGAAAGAGCTGAAACTATTCCCTAATACCGGGACTCAGCTGGCAACCGTCTTTGATCTGATGTaGAAGGGATGCTTCATAGCA +
Preference number: 4 (lower is better)
Translates to: CTLKELKLFPNTGTQLATVFDLM*KGCFIA
Trigger: TGCTATGAAGCATCCCTTCCACATCAGATCAAAGAC...GGTTGCCAGCTGAGTCCCGGTATTAGGGAATAGTTTCAGCTCTTTCAAAGTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp AAGGCAGCCCGGTGTGGACATAATCACATCTATGGCTACAAGGAACACGCAACAGTTTATCTGAGTACATaGACCCAGAACATTCACTGT +
Preference number: 4 (lower is better)
Translates to: KAARCGHNHIYGYKEHATVYLST*TQNIHC
Trigger: ACAGTGAATGTTCTGGGTCCATGTACTCAGATAAAC...TGTTGCGTGTTCCTTGTAGCCATAGATGTGATTATGTCCACACCGGGCTGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR TCA 90 bp ATCTCTCGAGTCTTTGCTGAGCCACATATGGGGACCACACATCACAGTCTTCACACTTCAATTATAGGATaGAAACAGCTTTGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: ISRVFAEPHMGTTHHSLHTSIIG*KQLCFP
Trigger: GGGAAAGCAAAGCTGTTTTCATCCTATAATTGAAGT...GTGAAGACTGTGATGTGTGGTCCCCATATGTGGCTCAGCAAAGACTCGAGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp AAAGGATTCTCCATATTATTCCAGGATGGGAGCCCATTCGACTGTAACACTGTGCTGATGTGGAAGGGATaGTTCATAGCAGTACAGGAT +
Preference number: 4 (lower is better)
Translates to: KGFSILFQDGSPFDCNTVLMWKG*FIAVQD
Trigger: ATCCTGTACTGCTATGAAGCATCCCTTCCACATCAG...CACAGTGTTACAGTCGAATGGGCTCCCATCCTGGAATAATATGGAGAATCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp TACAAGGAACACGCAACAGAAAATCAGATTCCAACCAAGCAAAAGGCTGCTTGTCCACCGTGCCTGGCCTaGTTGGTTAACTTTATTCTT +
Preference number: 4 (lower is better)
Translates to: YKEHATENQIPTKQKAACPPCLA*LVNFIL
Trigger: AAGAATAAAGTTAACCAAGCAGGCCAGGCACGGTGG...ACAAGCAGCCTTTTGCTTGGTTGGAATCTGATTTTCTGTTGCGTGTTCCTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp CTCAGTCATTTAAAGGATATAGGAATGGAGGCCAAAACAGACCATTTGGAGGTCCCACCGTGCCTGGCCTaGTTGGTTAACTTTATTCTT +
Preference number: 4 (lower is better)
Translates to: LSHLKDIGMEAKTDHLEVPPCLA*LVNFIL
Trigger: AAGAATAAAGTTAACCAAGCAGGCCAGGCACGGTGG...GACCTCCAAATGGTCTGTTTTGGCCTCCATTCCTATATCCTTTAAATGACTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp TCTCAGTCATTTAAAGGATATAGGAATGGAGGCCAAAACAGACCATTTGGAGGTTCAGAGAACACTGCCTaGACCTCAGCACTGATAAGG +
Preference number: 4 (lower is better)
Translates to: SQSFKGYRNGGQNRPFGGSENTA*TSALIR
Trigger: CCTTATCAGTGCTGAGGTCCAGGCAGTGTTCTCTGA...ACCTCCAAATGGTCTGTTTTGGCCTCCATTCCTATATCCTTTAAATGACTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
CDS-3UTR CCA 90 bp AAAGGATTCTCCATATTATTCCAGGATGGGAGCCCATTCGACTGTAACACTGTGAGCAGTACAGGATGCTaGTATCATACAGCATCATCC +
Preference number: 4 (lower is better)
Translates to: KGFSILFQDGSPFDCNTVSSTGC*YHTASS
Trigger: GGATGATGCTGTATGATACCAGCATCCTGTACTGCT...CACAGTGTTACAGTCGAATGGGCTCCCATCCTGGAATAATATGGAGAATCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp GACAGTGAGTGGAAGACAAAGGATTCTCCATATTATTCCAGGATGGGAGCCCATGTCTTTGATCTGATGTaGAAGGGATGCTTCATAGCA +
Preference number: 4 (lower is better)
Translates to: DSEWKTKDSPYYSRMGAHVFDLM*KGCFIA
Trigger: TGCTATGAAGCATCCCTTCCACATCAGATCAAAGAC...ATGGGCTCCCATCCTGGAATAATATGGAGAATCCTTTGTCTTCCACTCACTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp CTCAGTCATTTAAAGGATATAGGAATGGAGGCCAAAACAGACCATTTGGAGGTCCCAAAACAGACCATTTaGAGGTCAGGGATGCCATGT +
Preference number: 4 (lower is better)
Translates to: LSHLKDIGMEAKTDHLEVPKQTI*RSGMPC
Trigger: ACATGGCATCCCTGACCTCCAAATGGTCTGTTTTGG...GACCTCCAAATGGTCTGTTTTGGCCTCCATTCCTATATCCTTTAAATGACTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR TCA 90 bp TCTCAGTCATTTAAAGGATATAGGAATGGAGGCCAAAACAGACCATTTGGAGGTTACAGCATCATCCTCTaGGTTACCAGCGAGATGATG +
Preference number: 4 (lower is better)
Translates to: SQSFKGYRNGGQNRPFGGYSIIL*VTSEMM
Trigger: CATCATCTCGCTGGTAACTCAGAGGATGATGCTGTA...ACCTCCAAATGGTCTGTTTTGGCCTCCATTCCTATATCCTTTAAATGACTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR TCA 90 bp AACAGACCATTTGGAGGTCAGGGATGCCATGTTTTCTATTGGGGCAATTTCATGGCTTTAAGATGTCTTTaGTCTGATGTGGAAGGGATG +
Preference number: 4 (lower is better)
Translates to: NRPFGGQGCHVFYWGNFMALRCL*SDVEGM
Trigger: CATCCCTTCCACATCAGATCAAAGACATCTTAAAGC...CATGAAATTGCCCCAATAGAAAACATGGCATCCCTGACCTCCAAATGGTCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR TCA 90 bp GACAGTGAGTGGAAGACAAAGGATTCTCCATATTATTCCAGGATGGGAGCCCATTTCTTCATGTTTATCTaGGTACATGGACCCAGAACA +
Preference number: 4 (lower is better)
Translates to: DSEWKTKDSPYYSRMGAHFFMFI*VHGPRT
Trigger: TGTTCTGGGTCCATGTACTCAGATAAACATGAAGAA...ATGGGCTCCCATCCTGGAATAATATGGAGAATCCTTTGTCTTCCACTCACTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp AACAATGCACAGGAATTCTCACATTCTTCAGCGAGAACTCTGGCGTCTTTTTATAGAGCCAGCAACAGATaGAATGAGCTTCTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: NNAQEFSHSSARTLASFYRASNR*NELLFS
Trigger: GGAGAAGAGAAGCTCATTGCATCTGTTGCTGGCTCT...ATAAAAAGACGCCAGAGTTCTCGCTGAAGAATGTGAGAATTCCTGTGCATTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp TACAAGGAACACGCAACAGAAAATCAGATTCCAACCAAGCAAAAGGCTGCTTGTTTTGTGCTCAGGTGTTaGGTAAATCCAGATGAAGCC +
Preference number: 4 (lower is better)
Translates to: YKEHATENQIPTKQKAACFVLRC*VNPDEA
Trigger: GGCTTCATCTGGATTTACCCAACACCTGAGCACAAA...ACAAGCAGCCTTTTGCTTGGTTGGAATCTGATTTTCTGTTGCGTGTTCCTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp TCTCAGTCATTTAAAGGATATAGGAATGGAGGCCAAAACAGACCATTTGGAGGTCCAAAACAGACCATTTaGAGGTCAGGGATGCCATGT +
Preference number: 4 (lower is better)
Translates to: SQSFKGYRNGGQNRPFGGPKQTI*RSGMPC
Trigger: ACATGGCATCCCTGACCTCCAAATGGTCTGTTTTGG...ACCTCCAAATGGTCTGTTTTGGCCTCCATTCCTATATCCTTTAAATGACTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR TCA 90 bp AATGCTCCACACTACTTCAATTATAGGATGAAAACAGCTTTGCTTTCCCAGTCTTACAGCATCATCCTCTaGGTTACCAGCGAGATGATG +
Preference number: 4 (lower is better)
Translates to: NAPHYFNYRMKTALLSQSYSIIL*VTSEMM
Trigger: CATCATCTCGCTGGTAACTCAGAGGATGATGCTGTA...AGACTGGGAAAGCAAAGCTGTTTTCATCCTATAATTGAAGTAGTGTGGAGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp TACAAGGAACACGCAACAGAAAATCAGATTCCAACCAAGCAAAAGGCTGCTTGTCATAGCAGTACAGGATaGTGGTATCATACAGCATCA +
Preference number: 4 (lower is better)
Translates to: YKEHATENQIPTKQKAACHSSTG*WYHTAS
Trigger: TGATGCTGTATGATACCAGCATCCTGTACTGCTATG...ACAAGCAGCCTTTTGCTTGGTTGGAATCTGATTTTCTGTTGCGTGTTCCTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR TCA 90 bp TCTCAGTCATTTAAAGGATATAGGAATGGAGGCCAAAACAGACCATTTGGAGGTGCTTTAAGATGTCTTTaGTCTGATGTGGAAGGGATG +
Preference number: 4 (lower is better)
Translates to: SQSFKGYRNGGQNRPFGGALRCL*SDVEGM
Trigger: CATCCCTTCCACATCAGATCAAAGACATCTTAAAGC...ACCTCCAAATGGTCTGTTTTGGCCTCCATTCCTATATCCTTTAAATGACTGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp AATGCTCCACACTACTTCAATTATAGGATGAAAACAGCTTTGCTTTCCCAGTCTAGCAGTACAGGATGCTaGTATCATACAGCATCATCC +
Preference number: 4 (lower is better)
Translates to: NAPHYFNYRMKTALLSQSSSTGC*YHTASS
Trigger: GGATGATGCTGTATGATACCAGCATCCTGTACTGCT...AGACTGGGAAAGCAAAGCTGTTTTCATCCTATAATTGAAGTAGTGTGGAGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CCA 90 bp AATGCTCCACACTACTTCAATTATAGGATGAAAACAGCTTTGCTTTCCCAGTCTTGTTCCAAAAGCCTCTaGCGTGTTTCCATCACAATC +
Preference number: 4 (lower is better)
Translates to: NAPHYFNYRMKTALLSQSCSKSL*RVSITI
Trigger: GATTGTGATGGAAACACGCCAGAGGCTTTTGGAACA...AGACTGGGAAAGCAAAGCTGTTTTCATCCTATAATTGAAGTAGTGTGGAGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR TCA 90 bp AACAATGCACAGGAATTCTCACATTCTTCAGCGAGAACTCTGGCGTCTTTTTATTTCTTCATGTTTATCTaGGTACATGGACCCAGAACA +
Preference number: 4 (lower is better)
Translates to: NNAQEFSHSSARTLASFYFFMFI*VHGPRT
Trigger: TGTTCTGGGTCCATGTACTCAGATAAACATGAAGAA...ATAAAAAGACGCCAGAGTTCTCGCTGAAGAATGTGAGAATTCCTGTGCATTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp AATGCTCCACACTACTTCAATTATAGGATGAAAACAGCTTTGCTTTCCCAGTCTCATAGCAGTACAGGATaGTGGTATCATACAGCATCA +
Preference number: 4 (lower is better)
Translates to: NAPHYFNYRMKTALLSQSHSSTG*WYHTAS
Trigger: TGATGCTGTATGATACCAGCATCCTGTACTGCTATG...AGACTGGGAAAGCAAAGCTGTTTTCATCCTATAATTGAAGTAGTGTGGAGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR GCA 90 bp AACAATGCACAGGAATTCTCACATTCTTCAGCGAGAACTCTGGCGTCTTTTTATTCGACTGTAACACTGTaGACTTTGAAAGAGCTGAAA +
Preference number: 4 (lower is better)
Translates to: NNAQEFSHSSARTLASFYSTVTL*TLKELK
Trigger: TTTCAGCTCTTTCAAAGTGCACAGTGTTACAGTCGA...ATAAAAAGACGCCAGAGTTCTCGCTGAAGAATGTGAGAATTCCTGTGCATTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CAA 90 bp GGCCTGTGGGCTGGAGGCCGTCACAGGGCCGTCAATGCAGACAAAGGGATGATCGGTGATCTGCCCGCCTaGGCCTCCCTAAGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: GLWAGGRHRAVNADKGMIGDLPA*ASLSAG
Trigger: CCCAGCACTTAGGGAGGCCAAGGCGGGCAGATCACC...GATCATCCCTTTGTCTGCATTGACGGCCCTGTGACGGCCTCCAGCCCACAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CAA 90 bp GAAAGCAGGCCTGTGGGCTGGAGGCCGTCACAGGGCCGTCAATGCAGACAAAGGCTCTCGCTAAGAGGCTaGCGAGCCACTGGAAGCCTC +
Preference number: 5 (lower is better)
Translates to: ESRPVGWRPSQGRQCRQRLSLRG*RATGSL
Trigger: GAGGCTTCCAGTGGCTCGCAAGCCTCTTAGCGAGAG...CCTTTGTCTGCATTGACGGCCCTGTGACGGCCTCCAGCCCACAGGCCTGCTTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS TCA 90 bp TGCGAGCCACTGGAAGCCTCATCTCCATCGCCATCTTGGCGCCAATaGGTTGCGCAGGCGCAGCTCAGTCGGGAGCTGCGATATCCGACT +
Preference number: 5 (lower is better)
Translates to: CEPLEASSPSPSWRQ*VAQAQLSRELRYPT
Trigger: AGTCGGATATCGCAGCTCCCGACTGAGCTGCGCCTGCGCAACTCATTGGCGCCAAGATGGCGATGGAGATGAGGCTTCCAGTGGCTCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491115.6
CDS GCA 90 bp GCCACTGGAAGCCTCATCTCCATCGCCATCTTGGCGCCAATGAGTTaGGCAGGCGCAGCTCAGTCGGGAGCTGCGATATCCGACTCCACA +
Preference number: 5 (lower is better)
Translates to: ATGSLISIAILAPMS*AGAAQSGAAISDST
Trigger: TGTGGAGTCGGATATCGCAGCTCCCGACTGAGCTGCGCCTGCGCAACTCATTGGCGCCAAGATGGCGATGGAGATGAGGCTTCCAGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491115.6
CDS CCA 90 bp CTTAGTGTCGCGGCCCAGTCTCTCGCTAAGAGGCTTGCGAGCCACTaGAAGCCTCATCTCCATCGCCATCTTGGCGCCAATGAGTTGCGC +
Preference number: 5 (lower is better)
Translates to: LSVAAQSLAKRLASH*KPHLHRHLGANELR
Trigger: GCGCAACTCATTGGCGCCAAGATGGCGATGGAGATGAGGCTTCCAGTGGCTCGCAAGCCTCTTAGCGAGAGACTGGGCCGCGACACTAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491115.6
ENST00000546165.5
CDS-3UTR CAA 90 bp GAAAGCAGGCCTGTGGGCTGGAGGCCGTCACAGGGCCGTCAATGCAGACAAAGGATCTCCATCGCCATCTaGGCGCCAATGAGTTGCGCA +
Preference number: 5 (lower is better)
Translates to: ESRPVGWRPSQGRQCRQRISIAI*APMSCA
Trigger: TGCGCAACTCATTGGCGCCAAGATGGCGATGGAGAT...CCTTTGTCTGCATTGACGGCCCTGTGACGGCCTCCAGCCCACAGGCCTGCTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546165.5
CDS-3UTR CAA 90 bp GGCCTGTGGGCTGGAGGCCGTCACAGGGCCGTCAATGCAGACAAAGGGATGATCCTTCCACCTCTTCTGTaGAACCTCTGTGATTCGTCC +
Preference number: 5 (lower is better)
Translates to: GLWAGGRHRAVNADKGMILPPLL*NLCDSS
Trigger: GGACGAATCACAGAGGTTCAACAGAAGAGGTGGAAG...GATCATCCCTTTGTCTGCATTGACGGCCCTGTGACGGCCTCCAGCCCACAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CAA 90 bp GGCCTGTGGGCTGGAGGCCGTCACAGGGCCGTCAATGCAGACAAAGGGATGATCCCGTGCCTGGCCTGCTaGGTTAACTTTATTCTTCCA +
Preference number: 5 (lower is better)
Translates to: GLWAGGRHRAVNADKGMIPCLAC*VNFILP
Trigger: TGGAAGAATAAAGTTAACCAAGCAGGCCAGGCACGG...GATCATCCCTTTGTCTGCATTGACGGCCCTGTGACGGCCTCCAGCCCACAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS GCA 90 bp GCAAATCCATGTCTGGTCCTGGCAGGACAGCTCAAGTCCACGTCCTaGCAAGGAAGAGTCCGCAGGACCCAGGGTTGTGAAAGTCAGCAT +
Preference number: 5 (lower is better)
Translates to: ANPCLVLAGQLKSTS*QGRVRRTQGCESQH
Trigger: ATGCTGACTTTCACAACCCTGGGTCCTGCGGACTCTTCCTTGGCAGGACGTGGACTTGAGCTGTCCTGCCAGGACCAGACATGGATTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467138.1
CDS-3UTR CAA 90 bp ATCTGCCACCCAGGCTTGGTGTTAGGACAGGAGAAAGCAGGCCTGTGGGCTGGAGCCAAAACAGACCATTaGGAGGTCAGGGATGCCATG +
Preference number: 5 (lower is better)
Translates to: ICHPGLVLGQEKAGLWAGAKTDH*EVRDAM
Trigger: CATGGCATCCCTGACCTCCAAATGGTCTGTTTTGGC...TCCAGCCCACAGGCCTGCTTTCTCCTGTCCTAACACCAAGCCTGGGTGGCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CAA 90 bp AAGGCAGCCCGGTGTGGACATAATCACATCTATGGCTACAAGGAACACGCAACAGGTGATCTGCCCGCCTaGGCCTCCCTAAGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: KAARCGHNHIYGYKEHATGDLPA*ASLSAG
Trigger: CCCAGCACTTAGGGAGGCCAAGGCGGGCAGATCACC...TGTTGCGTGTTCCTTGTAGCCATAGATGTGATTATGTCCACACCGGGCTGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS TCA 90 bp CAAGTCCACGTCCTGCCAAGGAAGAGTCCGCAGGACCCAGGGTTGTaGAAGTCAGCATACTGCAGCAGTCCTCTGCCTACTCCATGTACA +
Preference number: 5 (lower is better)
Translates to: QVHVLPRKSPQDPGL*KSAYCSSPLPTPCT
Trigger: TGTACATGGAGTAGGCAGAGGACTGCTGCAGTATGCTGACTTTCACAACCCTGGGTCCTGCGGACTCTTCCTTGGCAGGACGTGGACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467138.1
CDS GCA 90 bp GGACCACACATCACAGTCTTCACTCCTGCAAGGTCCACAGTCCCGTaGTTCTGGAGCACCTCCTTATCCCTCCTGTTCCAAAAGCCTCTG +
Preference number: 5 (lower is better)
Translates to: GPHITVFTPARSTVP*FWSTSLSLLFQKPL
Trigger: CAGAGGCTTTTGGAACAGGAGGGATAAGGAGGTGCTCCAGAAGCACGGGACTGTGGACCTTGCAGGAGTGAAGACTGTGATGTGTGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000430138.6
ENST00000467138.1
ENST00000546165.5
CDS GCA 90 bp CGCAGGACCCAGGGTTGTGAAAGTCAGCATACTGCAGCAGTCCTCTaGCTACTCCATGTACATCAACGTGGCTGTCTGCAGCCACTCCAT +
Preference number: 5 (lower is better)
Translates to: RRTQGCESQHTAAVL*LLHVHQRGCLQPLH
Trigger: ATGGAGTGGCTGCAGACAGCCACGTTGATGTACATGGAGTAGGCAGAGGACTGCTGCAGTATGCTGACTTTCACAACCCTGGGTCCTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467138.1
CDS CCA 90 bp CACATCACAGTCTTCACTCCTGCAAGGTCCACAGTCCCGTGCTTCTaGAGCACCTCCTTATCCCTCCTGTTCCAAAAGCCTCTGGCGTGT +
Preference number: 5 (lower is better)
Translates to: HITVFTPARSTVPCF*STSLSLLFQKPLAC
Trigger: ACACGCCAGAGGCTTTTGGAACAGGAGGGATAAGGAGGTGCTCCAGAAGCACGGGACTGTGGACCTTGCAGGAGTGAAGACTGTGATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000430138.6
ENST00000467138.1
ENST00000546165.5
CDS-3UTR CAA 90 bp GGCCTGTGGGCTGGAGGCCGTCACAGGGCCGTCAATGCAGACAAAGGGATGATCGTAAGAAACCTCTCATaGCAAGCTCATCTTCTGCAG +
Preference number: 5 (lower is better)
Translates to: GLWAGGRHRAVNADKGMIVRNLS*QAHLLQ
Trigger: CTGCAGAAGATGAGCTTGCAATGAGAGGTTTCTTAC...GATCATCCCTTTGTCTGCATTGACGGCCCTGTGACGGCCTCCAGCCCACAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS TCA 90 bp CATGACCCTAGCTCATACCTGAACCCCAAACACTCATCTTGCCTGTaGGATGTGTGCCTCTGGGTAGGTAAGGAGATGGGTGGAGCTGGG +
Preference number: 5 (lower is better)
Translates to: HDPSSYLNPKHSSCL*DVCLWVGKEMGGAG
Trigger: CCCAGCTCCACCCATCTCCTTACCTACCCAGAGGCACACATCTCACAGGCAAGATGAGTGTTTGGGGTTCAGGTATGAGCTAGGGTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467138.1
CDS TCA 90 bp GAACTCATGTGCCAGACATTAGAGAAGCTGAAGCCAATGAGGAAGTaGGCTGGAGCCTCCTGCTGGCCCAGGAGCACTGCGTTGTTCCAT +
Preference number: 5 (lower is better)
Translates to: ELMCQTLEKLKPMRK*AGASCWPRSTALFH
Trigger: ATGGAACAACGCAGTGCTCCTGGGCCAGCAGGAGGCTCCAGCTCACTTCCTCATTGGCTTCAGCTTCTCTAATGTCTGGCACATGAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467138.1
CDS GCA 90 bp TTTGCTGAGCCACATATGGGGACCACACATCACAGTCTTCACTCCTaGAAGGTCCACAGTCCCGTGCTTCTGGAGCACCTCCTTATCCCT +
Preference number: 5 (lower is better)
Translates to: FAEPHMGTTHHSLHS*KVHSPVLLEHLLIP
Trigger: AGGGATAAGGAGGTGCTCCAGAAGCACGGGACTGTGGACCTTGCAGGAGTGAAGACTGTGATGTGTGGTCCCCATATGTGGCTCAGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000430138.6
ENST00000467138.1
ENST00000546165.5
CDS CCA 90 bp CATCTTCTGCAGATCTTCTCCTCAGCTCTCCTCCAGGAAGGTTCATaGACGAGAGCAGCAAGACCGAATCCAGCCTGGAGTTGGTCTCCA +
Preference number: 5 (lower is better)
Translates to: HLLQIFSSALLQEGS*TRAARPNPAWSWSP
Trigger: TGGAGACCAACTCCAGGCTGGATTCGGTCTTGCTGCTCTCGTCCATGAACCTTCCTGGAGGAGAGCTGAGGAGAAGATCTGCAGAAGATG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000372350.7
ENST00000372352.7
ENST00000372358.10
ENST00000430138.6
ENST00000463488.1
ENST00000495699.2
ENST00000546165.5
CDS-3UTR CAA 90 bp AGGCAGCCCGGTGTGGACATAATCACATCTATGGCTACAAGGAACACGCAACAGGAATCCAGCCTGGAGTaGGTCTCCACCTTCCACCTC +
Preference number: 5 (lower is better)
Translates to: RQPGVDIITSMATRNTQQESSLE*VSTFHL
Trigger: GAGGTGGAAGGTGGAGACCAACTCCAGGCTGGATTC...CTGTTGCGTGTTCCTTGTAGCCATAGATGTGATTATGTCCACACCGGGCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CAA 90 bp TATGGGGACCACACATCACAGTCTTCACTCCTGCAAGGTCCACAGTCCCGTGCTGCCAAAACAGACCATTaGGAGGTCAGGGATGCCATG +
Preference number: 5 (lower is better)
Translates to: YGDHTSQSSLLQGPQSRAAKTDH*EVRDAM
Trigger: CATGGCATCCCTGACCTCCAAATGGTCTGTTTTGGC...AGCACGGGACTGTGGACCTTGCAGGAGTGAAGACTGTGATGTGTGGTCCCCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CAA 90 bp GGCCTGTGGGCTGGAGGCCGTCACAGGGCCGTCAATGCAGACAAAGGGATGATCAGGATGAAAACAGCTTaGCTTTCCCAGTCTCCATTT +
Preference number: 5 (lower is better)
Translates to: GLWAGGRHRAVNADKGMIRMKTA*LSQSPF
Trigger: AAATGGAGACTGGGAAAGCAAAGCTGTTTTCATCCT...GATCATCCCTTTGTCTGCATTGACGGCCCTGTGACGGCCTCCAGCCCACAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS TCA 90 bp AAGCCGTTGTTACCGAGAATCACTGAGGCACCACATGGCAAATCATaGAAGTGGGTCTTCTGCCGTTTCACCAGGGAGGGGGAAACCTGG +
Preference number: 5 (lower is better)
Translates to: KPLLPRITEAPHGKS*KWVFCRFTREGETW
Trigger: CCAGGTTTCCCCCTCCCTGGTGAAACGGCAGAAGACCCACTTTCATGATTTGCCATGTGGTGCCTCAGTGATTCTCGGTAACAACGGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000372351.7
ENST00000372358.10
ENST00000430138.6
ENST00000467138.1
ENST00000491115.6
ENST00000495699.2
ENST00000546165.5
CDS GCA 90 bp TTCACCAGGGAGGGGGAAACTTTTCCATATTTCAGGCTCCTCGTGTaGAAAGAGACAGCTCCGTCAGAGAACACTGCCTGGACCTCAGCA +
Preference number: 5 (lower is better)
Translates to: FTREGETFPYFRLLV*KETAPSENTAWTSA
Trigger: TGCTGAGGTCCAGGCAGTGTTCTCTGACGGAGCTGTCTCTTTGCACACGAGGAGCCTGAAATATGGAAAAGTTTCCCCCTCCCTGGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372352.7
CDS CCA 90 bp CTCCAGGAAGGTTCATGGACGAGAGCAGCAAGACCGAATCCAGCCTaGAGTTGGTCTCCACCTTCCACCTCTTCTGTTGAACCTATAAGC +
Preference number: 5 (lower is better)
Translates to: LQEGSWTRAARPNPA*SWSPPSTSSVEPIS
Trigger: GCTTATAGGTTCAACAGAAGAGGTGGAAGGTGGAGACCAACTCCAGGCTGGATTCGGTCTTGCTGCTCTCGTCCATGAACCTTCCTGGAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430138.6
CDS-3UTR CAA 90 bp GCCACATATGGGGACCACACATCACAGTCTTCACTCCTGCAAGGTCCACAGTCCCTTCCACCTCTTCTGTaGAACCTCTGTGATTCGTCC +
Preference number: 5 (lower is better)
Translates to: ATYGDHTSQSSLLQGPQSLPPLL*NLCDSS
Trigger: GGACGAATCACAGAGGTTCAACAGAAGAGGTGGAAG...GGACTGTGGACCTTGCAGGAGTGAAGACTGTGATGTGTGGTCCCCATATGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CAA 90 bp CGAGTCTTTGCTGAGCCACATATGGGGACCACACATCACAGTCTTCACTCCTGCGCCAAAACAGACCATTaGGAGGTCAGGGATGCCATG +
Preference number: 5 (lower is better)
Translates to: RVFAEPHMGTTHHSLHSCAKTDH*EVRDAM
Trigger: CATGGCATCCCTGACCTCCAAATGGTCTGTTTTGGC...GCAGGAGTGAAGACTGTGATGTGTGGTCCCCATATGTGGCTCAGCAAAGACTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CAA 90 bp GCCACATATGGGGACCACACATCACAGTCTTCACTCCTGCAAGGTCCACAGTCCCCGTGCCTGGCCTGCTaGGTTAACTTTATTCTTCCA +
Preference number: 5 (lower is better)
Translates to: ATYGDHTSQSSLLQGPQSPCLAC*VNFILP
Trigger: TGGAAGAATAAAGTTAACCAAGCAGGCCAGGCACGG...GGACTGTGGACCTTGCAGGAGTGAAGACTGTGATGTGTGGTCCCCATATGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS TCA 90 bp CAGCAGAGCCCGACACTTGGTCTAAGACTCGGATCCCTGCAAGGATaGCATGGTTCTTCCGTCAGAGACATACAATGGAAGGCCCATTTC +
Preference number: 5 (lower is better)
Translates to: QQSPTLGLRLGSLQG*HGSSVRDIQWKAHF
Trigger: GAAATGGGCCTTCCATTGTATGTCTCTGACGGAAGAACCATGTCATCCTTGCAGGGATCCGAGTCTTAGACCAAGTGTCGGGCTCTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463488.1
ENST00000490641.5
CDS GCA 90 bp ACATCAAGAGCCCGACTTACTTTTCCATATTTCAGGCTCCTCGTGTaGAAAGAGACAGCTCCGTCAGAGAACACTGCCTGGACCTCAGCC +
Preference number: 5 (lower is better)
Translates to: TSRARLTFPYFRLLV*KETAPSENTAWTSA
Trigger: GGCTGAGGTCCAGGCAGTGTTCTCTGACGGAGCTGTCTCTTTGCACACGAGGAGCCTGAAATATGGAAAAGTAAGTCGGGCTCTTGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467138.1
CDS CCA 90 bp GAGCCCGACACTTGGTCTAAGACTCGGATCCCTGCAAGGATGACATaGTTCTTCCGTCAGAGACATACAATGGAAGGCCCATTTCCCAGT +
Preference number: 5 (lower is better)
Translates to: EPDTWSKTRIPARMT*FFRQRHTMEGPFPS
Trigger: ACTGGGAAATGGGCCTTCCATTGTATGTCTCTGACGGAAGAACCATGTCATCCTTGCAGGGATCCGAGTCTTAGACCAAGTGTCGGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463488.1
ENST00000490641.5
CDS-3UTR CAA 90 bp TATGGGGACCACACATCACAGTCTTCACTCCTGCAAGGTCCACAGTCCCGTGCTATCCAGATGAAGCCGTaGTTACCGAGAATCACTGAG +
Preference number: 5 (lower is better)
Translates to: YGDHTSQSSLLQGPQSRAIQMKP*LPRITE
Trigger: CTCAGTGATTCTCGGTAACAACGGCTTCATCTGGAT...AGCACGGGACTGTGGACCTTGCAGGAGTGAAGACTGTGATGTGTGGTCCCCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CAA 90 bp CTCAGTCATTTAAAGGATATAGGAATGGAGGCCAAAACAGACCATTTGGAGGTCGGTGATCTGCCCGCCTaGGCCTCCCTAAGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: LSHLKDIGMEAKTDHLEVGDLPA*ASLSAG
Trigger: CCCAGCACTTAGGGAGGCCAAGGCGGGCAGATCACC...GACCTCCAAATGGTCTGTTTTGGCCTCCATTCCTATATCCTTTAAATGACTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CAA 90 bp TACAAGGAACACGCAACAGAAAATCAGATTCCAACCAAGCAAAAGGCTGCTTGTGGTGATCTGCCCGCCTaGGCCTCCCTAAGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: YKEHATENQIPTKQKAACGDLPA*ASLSAG
Trigger: CCCAGCACTTAGGGAGGCCAAGGCGGGCAGATCACC...ACAAGCAGCCTTTTGCTTGGTTGGAATCTGATTTTCTGTTGCGTGTTCCTTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CAA 90 bp GTTCATCTGCCACCCAGGCTTGGTGTTAGGACAGGAGAAAGCAGGCCTGTGGGCAGGATGAAAACAGCTTaGCTTTCCCAGTCTCCATTT +
Preference number: 5 (lower is better)
Translates to: VHLPPRLGVRTGESRPVGRMKTA*LSQSPF
Trigger: AAATGGAGACTGGGAAAGCAAAGCTGTTTTCATCCT...GCCCACAGGCCTGCTTTCTCCTGTCCTAACACCAAGCCTGGGTGGCAGATGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS TCA 90 bp GGATGCTGGTATCATACAGCATCATCCTCTGAGTTACCAGCGAGATaGTGCAGTTCCGAAGCCGGGATATCACCTCTCGATCAGCAAGAG +
Preference number: 5 (lower is better)
Translates to: GCWYHTASSSELPAR*CSSEAGISPLDQQE
Trigger: CTCTTGCTGATCGAGAGGTGATATCCCGGCTTCGGAACTGCATCATCTCGCTGGTAACTCAGAGGATGATGCTGTATGATACCAGCATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000430138.6
ENST00000467138.1
ENST00000491115.6
ENST00000495699.2
ENST00000546165.5
CDS CCA 90 bp GAAGGTTCATGGACGAGAGCAGCAAGACCGAATCCAGCCTGGAGTTaGTCTCCACCTTCCACCTCTTCTGTTGAACCTATAAGCCAAGTT +
Preference number: 5 (lower is better)
Translates to: EGSWTRAARPNPAWS*SPPSTSSVEPISQV
Trigger: AACTTGGCTTATAGGTTCAACAGAAGAGGTGGAAGGTGGAGACCAACTCCAGGCTGGATTCGGTCTTGCTGCTCTCGTCCATGAACCTTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430138.6
CDS-3UTR CAA 90 bp AAAGGATTCTCCATATTATTCCAGGATGGGAGCCCATTCGACTGTAACACTGTGCTCTCGCTAAGAGGCTaGCGAGCCACTGGAAGCCTC +
Preference number: 5 (lower is better)
Translates to: KGFSILFQDGSPFDCNTVLSLRG*RATGSL
Trigger: GAGGCTTCCAGTGGCTCGCAAGCCTCTTAGCGAGAG...CACAGTGTTACAGTCGAATGGGCTCCCATCCTGGAATAATATGGAGAATCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CAA 90 bp GCCACATATGGGGACCACACATCACAGTCTTCACTCCTGCAAGGTCCACAGTCCGTAAGAAACCTCTCATaGCAAGCTCATCTTCTGCAG +
Preference number: 5 (lower is better)
Translates to: ATYGDHTSQSSLLQGPQSVRNLS*QAHLLQ
Trigger: CTGCAGAAGATGAGCTTGCAATGAGAGGTTTCTTAC...GGACTGTGGACCTTGCAGGAGTGAAGACTGTGATGTGTGGTCCCCATATGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CAA 90 bp TATGGGGACCACACATCACAGTCTTCACTCCTGCAAGGTCCACAGTCCCGTGCTGTAAGAAACCTCTCATaGCAAGCTCATCTTCTGCAG +
Preference number: 5 (lower is better)
Translates to: YGDHTSQSSLLQGPQSRAVRNLS*QAHLLQ
Trigger: CTGCAGAAGATGAGCTTGCAATGAGAGGTTTCTTAC...AGCACGGGACTGTGGACCTTGCAGGAGTGAAGACTGTGATGTGTGGTCCCCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CAA 90 bp GCCGTCAATGCAGACAAAGGGATGATCTCTCGAGTCTTTGCTGAGCCACATATGATCTGCCACCCAGGCTaGGTGTTAGGACAGGAGAAA +
Preference number: 5 (lower is better)
Translates to: AVNADKGMISRVFAEPHMICHPG*VLGQEK
Trigger: TTTCTCCTGTCCTAACACCAAGCCTGGGTGGCAGAT...CATATGTGGCTCAGCAAAGACTCGAGAGATCATCCCTTTGTCTGCATTGACGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CAA 90 bp GCCGTCAATGCAGACAAAGGGATGATCTCTCGAGTCTTTGCTGAGCCACATATGGCCAAAACAGACCATTaGGAGGTCAGGGATGCCATG +
Preference number: 5 (lower is better)
Translates to: AVNADKGMISRVFAEPHMAKTDH*EVRDAM
Trigger: CATGGCATCCCTGACCTCCAAATGGTCTGTTTTGGC...CATATGTGGCTCAGCAAAGACTCGAGAGATCATCCCTTTGTCTGCATTGACGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS TCA 90 bp AAGCCGTTGTTACCGAGAATCACTGAGGCACCACATGGCAAATCATaGAAGTGGGTCTTCTGCCGTTTCACCAGGGAGGGGGAAACTTTT +
Preference number: 5 (lower is better)
Translates to: KPLLPRITEAPHGKS*KWVFCRFTREGETF
Trigger: AAAAGTTTCCCCCTCCCTGGTGAAACGGCAGAAGACCCACTTTCATGATTTGCCATGTGGTGCCTCAGTGATTCTCGGTAACAACGGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372352.7
CDS TCA 90 bp CCCCTGCTTCCTCTTCTTTGTGCTCAGGTGTTGGGTAAATCCAGATaGAGCCGTTGTTACCGAGAATCACTGAGGCACCACATGGCAAAT +
Preference number: 5 (lower is better)
Translates to: PLLPLLCAQVLGKSR*SRCYRESLRHHMAN
Trigger: ATTTGCCATGTGGTGCCTCAGTGATTCTCGGTAACAACGGCTTCATCTGGATTTACCCAACACCTGAGCACAAAGAAGAGGAAGCAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000372350.7
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000430138.6
ENST00000467138.1
ENST00000491115.6
ENST00000495699.2
ENST00000546165.5
CDS GCA 90 bp TCGATCAGCAAGAGAGACAGGCTCCAGGTTTGCAATGAAGCCCCCTaGTTCCTCTTCTTTGTGCTCAGGTGTTGGGTAAATCCAGATGAA +
Preference number: 5 (lower is better)
Translates to: SISKRDRLQVCNEAP*FLFFVLRCWVNPDE
Trigger: TTCATCTGGATTTACCCAACACCTGAGCACAAAGAAGAGGAAGCAGGGGGCTTCATTGCAAACCTGGAGCCTGTCTCTCTTGCTGATCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000430138.6
ENST00000467138.1
ENST00000491115.6
ENST00000495699.2
ENST00000546165.5
CDS GCA 90 bp CTGCAGCAGTCCTCTGCCTACTCCATGTACATCAACGTGGCTGTCTaGAGCCACTCCATTAAGGGAAGAGGTTTTTGTTCCACTCAGAAA +
Preference number: 5 (lower is better)
Translates to: LQQSSAYSMYINVAV*SHSIKGRGFCSTQK
Trigger: TTTCTGAGTGGAACAAAAACCTCTTCCCTTAATGGAGTGGCTGCAGACAGCCACGTTGATGTACATGGAGTAGGCAGAGGACTGCTGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467138.1
CDS GCA 90 bp AAGGCCCATTTCCCAGTCCCACAGAAAAGCATCAAGAGGCTGGAGTaGAAAGCGCAGGATACACTGATAAGGTCCCCTTCCTGTAAGAAA +
Preference number: 5 (lower is better)
Translates to: KAHFPVPQKSIKRLE*KAQDTLIRSPSCKK
Trigger: TTTCTTACAGGAAGGGGACCTTATCAGTGTATCCTGCGCTTTGCACTCCAGCCTCTTGATGCTTTTCTGTGGGACTGGGAAATGGGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463488.1
ENST00000490641.5
CDS CCA 90 bp TCAGCATACTGCAGCAGTCCTCTGCCTACTCCATGTACATCAACGTaGCTGTCTGCAGCCACTCCATTAAGGGAAGAGGTTTTTGTTCCA +
Preference number: 5 (lower is better)
Translates to: SAYCSSPLPTPCTST*LSAATPLREEVFVP
Trigger: TGGAACAAAAACCTCTTCCCTTAATGGAGTGGCTGCAGACAGCCACGTTGATGTACATGGAGTAGGCAGAGGACTGCTGCAGTATGCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467138.1
CDS-3UTR CAA 90 bp ATCTCTCGAGTCTTTGCTGAGCCACATATGGGGACCACACATCACAGTCTTCACCCGTGCCTGGCCTGCTaGGTTAACTTTATTCTTCCA +
Preference number: 5 (lower is better)
Translates to: ISRVFAEPHMGTTHHSLHPCLAC*VNFILP
Trigger: TGGAAGAATAAAGTTAACCAAGCAGGCCAGGCACGG...GTGAAGACTGTGATGTGTGGTCCCCATATGTGGCTCAGCAAAGACTCGAGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS GCA 90 bp CACACAGATCAACTTGTTTACTCTCTCCACAGAGCCAGCAACAGATaGAATGAGCTTCTCTTCTCCCATATACGTTCCATGGCCCCGCAT +
Preference number: 5 (lower is better)
Translates to: HTDQLVYSLHRASNR*NELLFSHIRSMAPH
Trigger: ATGCGGGGCCATGGAACGTATATGGGAGAAGAGAAGCTCATTGCATCTGTTGCTGGCTCTGTGGAGAGAGTAAACAAGTTGATCTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000372350.7
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000430138.6
ENST00000463488.1
ENST00000490641.5
ENST00000491115.6
ENST00000495699.2
ENST00000546165.5
CDS CCA 90 bp CGTGCTTCTGGAGCACCTCCTTATCCCTCCTGTTCCAAAAGCCTCTaGCGTGTTTCCATCACAATCTCCTCCATTATTTCTGGCTTTAAG +
Preference number: 5 (lower is better)
Translates to: RASGAPPYPSCSKSL*RVSITISSIISGFK
Trigger: CTTAAAGCCAGAAATAATGGAGGAGATTGTGATGGAAACACGCCAGAGGCTTTTGGAACAGGAGGGATAAGGAGGTGCTCCAGAAGCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000430138.6
ENST00000467138.1
ENST00000546165.5
CDS TCA 90 bp AGGTGTTGGGTAAATCCAGATGAAGCCGTTGTTACCGAGAATCACTaGGGCACCACATGGCAAATCATGAAAGTGGGTCTTCTGCCGTTT +
Preference number: 5 (lower is better)
Translates to: RCWVNPDEAVVTENH*GTTWQIMKVGLLPF
Trigger: AAACGGCAGAAGACCCACTTTCATGATTTGCCATGTGGTGCCTCAGTGATTCTCGGTAACAACGGCTTCATCTGGATTTACCCAACACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000430138.6
ENST00000467138.1
ENST00000491115.6
ENST00000495699.2
ENST00000546165.5
CDS GCA 90 bp GACCGTCCTGATGTTACGTTTAAGGAACACGATCAGTTTGTGGGATaGCAGCCTCTATTAATGCTTAGCTACTGGGGTTCTTTAGGCCAG +
Preference number: 5 (lower is better)
Translates to: DRPDVTFKEHDQFVG*QPLLMLSYWGSLGQ
Trigger: CTGGCCTAAAGAACCCCAGTAGCTAAGCATTAATAGAGGCTGGCATCCCACAAACTGATCGTGTTCCTTAAACGTAACATCAGGACGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467138.1
CDS-3UTR CAA 90 bp AGCCACATATGGGGACCACACATCACAGTCTTCACTCCTGCAAGGTCCACAGTCGTAACACTGTGCACTTaGAAAGAGCTGAAACTATTC +
Preference number: 5 (lower is better)
Translates to: SHIWGPHITVFTPARSTVVTLCT*KELKLF
Trigger: GAATAGTTTCAGCTCTTTCAAAGTGCACAGTGTTAC...GACTGTGGACCTTGCAGGAGTGAAGACTGTGATGTGTGGTCCCCATATGTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS CCA 90 bp CACGATCAGTTTGTGGGATGCCAGCCTCTATTAATGCTTAGCTACTaGGGTTCTTTAGGCCAGAATTCCAGAGAGCTATGGGGATTCAAA +
Preference number: 5 (lower is better)
Translates to: HDQFVGCQPLLMLSY*GSLGQNSRELWGFK
Trigger: TTTGAATCCCCATAGCTCTCTGGAATTCTGGCCTAAAGAACCCCAGTAGCTAAGCATTAATAGAGGCTGGCATCCCACAAACTGATCGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467138.1
CDS-3UTR CAA 90 bp GACAGTGAGTGGAAGACAAAGGATTCTCCATATTATTCCAGGATGGGAGCCCATATCCAGATGAAGCCGTaGTTACCGAGAATCACTGAG +
Preference number: 5 (lower is better)
Translates to: DSEWKTKDSPYYSRMGAHIQMKP*LPRITE
Trigger: CTCAGTGATTCTCGGTAACAACGGCTTCATCTGGAT...ATGGGCTCCCATCCTGGAATAATATGGAGAATCCTTTGTCTTCCACTCACTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CAA 90 bp TACAAGGAACACGCAACAGAAAATCAGATTCCAACCAAGCAAAAGGCTGCTTGTATCTGCCACCCAGGCTaGGTGTTAGGACAGGAGAAA +
Preference number: 5 (lower is better)
Translates to: YKEHATENQIPTKQKAACICHPG*VLGQEK
Trigger: TTTCTCCTGTCCTAACACCAAGCCTGGGTGGCAGAT...ACAAGCAGCCTTTTGCTTGGTTGGAATCTGATTTTCTGTTGCGTGTTCCTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CAA 90 bp CTCAGTCATTTAAAGGATATAGGAATGGAGGCCAAAACAGACCATTTGGAGGTCATCTGCCACCCAGGCTaGGTGTTAGGACAGGAGAAA +
Preference number: 5 (lower is better)
Translates to: LSHLKDIGMEAKTDHLEVICHPG*VLGQEK
Trigger: TTTCTCCTGTCCTAACACCAAGCCTGGGTGGCAGAT...GACCTCCAAATGGTCTGTTTTGGCCTCCATTCCTATATCCTTTAAATGACTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CAA 90 bp AGGCAGCCCGGTGTGGACATAATCACATCTATGGCTACAAGGAACACGCAACAGGTAACACTGTGCACTTaGAAAGAGCTGAAACTATTC +
Preference number: 5 (lower is better)
Translates to: RQPGVDIITSMATRNTQQVTLCT*KELKLF
Trigger: GAATAGTTTCAGCTCTTTCAAAGTGCACAGTGTTAC...CTGTTGCGTGTTCCTTGTAGCCATAGATGTGATTATGTCCACACCGGGCTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CAA 90 bp TCTCAGTCATTTAAAGGATATAGGAATGGAGGCCAAAACAGACCATTTGGAGGTATCTGCCACCCAGGCTaGGTGTTAGGACAGGAGAAA +
Preference number: 5 (lower is better)
Translates to: SQSFKGYRNGGQNRPFGGICHPG*VLGQEK
Trigger: TTTCTCCTGTCCTAACACCAAGCCTGGGTGGCAGAT...ACCTCCAAATGGTCTGTTTTGGCCTCCATTCCTATATCCTTTAAATGACTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CAA 90 bp GCCGTCAATGCAGACAAAGGGATGATCTCTCGAGTCTTTGCTGAGCCACATATGGTAACACTGTGCACTTaGAAAGAGCTGAAACTATTC +
Preference number: 5 (lower is better)
Translates to: AVNADKGMISRVFAEPHMVTLCT*KELKLF
Trigger: GAATAGTTTCAGCTCTTTCAAAGTGCACAGTGTTAC...CATATGTGGCTCAGCAAAGACTCGAGAGATCATCCCTTTGTCTGCATTGACGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CAA 90 bp CTCAGTCATTTAAAGGATATAGGAATGGAGGCCAAAACAGACCATTTGGAGGTCATCCAGATGAAGCCGTaGTTACCGAGAATCACTGAG +
Preference number: 5 (lower is better)
Translates to: LSHLKDIGMEAKTDHLEVIQMKP*LPRITE
Trigger: CTCAGTGATTCTCGGTAACAACGGCTTCATCTGGAT...GACCTCCAAATGGTCTGTTTTGGCCTCCATTCCTATATCCTTTAAATGACTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CAA 90 bp GACAGTGAGTGGAAGACAAAGGATTCTCCATATTATTCCAGGATGGGAGCCCATAGGATGAAAACAGCTTaGCTTTCCCAGTCTCCATTT +
Preference number: 5 (lower is better)
Translates to: DSEWKTKDSPYYSRMGAHRMKTA*LSQSPF
Trigger: AAATGGAGACTGGGAAAGCAAAGCTGTTTTCATCCT...ATGGGCTCCCATCCTGGAATAATATGGAGAATCCTTTGTCTTCCACTCACTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS TCA 90 bp AGGTGTTGGGTAAATCCAGATGAAGCCGTTGTTACCGAGAATCACTaGGGCACCACATGGCAAATCATGAAAGTGGGTTTTTCCATATTT +
Preference number: 5 (lower is better)
Translates to: RCWVNPDEAVVTENH*GTTWQIMKVGFSIF
Trigger: AAATATGGAAAAACCCACTTTCATGATTTGCCATGTGGTGCCTCAGTGATTCTCGGTAACAACGGCTTCATCTGGATTTACCCAACACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372350.7
CDS TCA 90 bp TGCCTCGACTTTGTAAACACCAATCTGATATCGACGTTACCTCTGTaGTTCGTCCCACTACGATGTCTCCTACTTCACCAATGTATCTTT +
Preference number: 5 (lower is better)
Translates to: CLDFVNTNLISTLPL*FVPLRCLLLHQCIF
Trigger: AAAGATACATTGGTGAAGTAGGAGACATCGTAGTGGGACGAATCACAGAGGTAACGTCGATATCAGATTGGTGTTTACAAAGTCGAGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430138.6
CDS TCA 90 bp AATGAATGCCTTTTTCATGTAACTACAAGTGGAATGACTGTCCCATaGATGAAATCGCCAGCCTGCCTCGACTTTGTAAACACCAATCTG +
Preference number: 5 (lower is better)
Translates to: NECLFHVTTSGMTVP*MKSPACLDFVNTNL
Trigger: CAGATTGGTGTTTACAAAGTCGAGGCAGGCTGGCGATTTCATTCATGGGACAGTCATTCCACTTGTAGTTACATGAAAAAGGCATTCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430138.6
CDS TCA 90 bp CAAGCCACATATTTACATCAGAAGCCACACAACGGCCAAATGCAATaGATGCCTTTTTCATGTAACTACAAGTGGAATGACTGTCCCATG +
Preference number: 5 (lower is better)
Translates to: QATYLHQKPHNGQMQ*MPFSCNYKWNDCPM
Trigger: CATGGGACAGTCATTCCACTTGTAGTTACATGAAAAAGGCATTCATTGCATTTGGCCGTTGTGTGGCTTCTGATGTAAATATGTGGCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430138.6
CDS-3UTR CAA 90 bp AATGCTCCACACTACTTCAATTATAGGATGAAAACAGCTTTGCTTTCCCAGTCTATCCAGATGAAGCCGTaGTTACCGAGAATCACTGAG +
Preference number: 5 (lower is better)
Translates to: NAPHYFNYRMKTALLSQSIQMKP*LPRITE
Trigger: CTCAGTGATTCTCGGTAACAACGGCTTCATCTGGAT...AGACTGGGAAAGCAAAGCTGTTTTCATCCTATAATTGAAGTAGTGTGGAGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS-3UTR CAA 90 bp CTCAGTCATTTAAAGGATATAGGAATGGAGGCCAAAACAGACCATTTGGAGGTCAGGATGAAAACAGCTTaGCTTTCCCAGTCTCCATTT +
Preference number: 5 (lower is better)
Translates to: LSHLKDIGMEAKTDHLEVRMKTA*LSQSPF
Trigger: AAATGGAGACTGGGAAAGCAAAGCTGTTTTCATCCT...GACCTCCAAATGGTCTGTTTTGGCCTCCATTCCTATATCCTTTAAATGACTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS GCA 90 bp TCGAACAAGCCACATATTTACATCAGAAGCCACACAACGGCCAAATaGAATGAATGCCTTTTTCATGTAACTACAAGTGGAATGACTGTC +
Preference number: 5 (lower is better)
Translates to: SNKPHIYIRSHTTAK*NECLFHVTTSGMTV
Trigger: GACAGTCATTCCACTTGTAGTTACATGAAAAAGGCATTCATTGCATTTGGCCGTTGTGTGGCTTCTGATGTAAATATGTGGCTTGTTCGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430138.6
CDS-3UTR CAA 90 bp AATGCTCCACACTACTTCAATTATAGGATGAAAACAGCTTTGCTTTCCCAGTCTGTAAGAAACCTCTCATaGCAAGCTCATCTTCTGCAG +
Preference number: 5 (lower is better)
Translates to: NAPHYFNYRMKTALLSQSVRNLS*QAHLLQ
Trigger: CTGCAGAAGATGAGCTTGCAATGAGAGGTTTCTTAC...AGACTGGGAAAGCAAAGCTGTTTTCATCCTATAATTGAAGTAGTGTGGAGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000546165.5
CDS TCA 90 bp GAAATATATCACGAAGCTAGGTCACTGCAAGATTGGCGGGATGAATaGAAAGGAGACTACAGAATATACATCCTAAGTATATTCAAATTG +
Preference number: 5 (lower is better)
Translates to: EIYHEARSLQDWRDE*KGDYRIYILSIFKL
Trigger: CAATTTGAATATACTTAGGATGTATATTCTGTAGTCTCCTTTTCATTCATCCCGCCAATCTTGCAGTGACCTAGCTTCGTGATATATTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467138.1
CDS CAA 90 bp CTAAGAGGCTTGCGAGCCACTGGAAGCCTCATCTCCATCGCCATCTaGGCGCCAATGAGTTGCGCAGGCGCAGCTCAGTCGGGAGCTGCG +
Preference number: 6 (lower is better)
Translates to: LRGLRATGSLISIAI*APMSCAGAAQSGAA
Trigger: CGCAGCTCCCGACTGAGCTGCGCCTGCGCAACTCATTGGCGCCAAGATGGCGATGGAGATGAGGCTTCCAGTGGCTCGCAAGCCTCTTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491115.6
CDS TCA 72 bp CTGGAAGCCTCATCTCCATCGCCATCTTGGCGCCAATaGGTTGCGCAGGCGCAGCTCAGTCGGGAGCTGCGA +
Preference number: 6 (lower is better)
Translates to: LEASSPSPSWRQ*VAQAQLSRELR
Trigger: TCGCAGCTCCCGACTGAGCTGCGCCTGCGCAACTCATTGGCGCCAAGATGGCGATGGAGATGAGGCTTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491115.6
CDS CAA 90 bp AGCCACTGGAAGCCTCATCTCCATCGCCATCTTGGCGCCAATGAGTaGCGCAGGCGCAGCTCAGTCGGGAGCTGCGATATCCGACTCCAC +
Preference number: 6 (lower is better)
Translates to: SHWKPHLHRHLGANE*RRRSSVGSCDIRLH
Trigger: GTGGAGTCGGATATCGCAGCTCCCGACTGAGCTGCGCCTGCGCAACTCATTGGCGCCAAGATGGCGATGGAGATGAGGCTTCCAGTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491115.6
CDS GCA 72 bp AGCCTCATCTCCATCGCCATCTTGGCGCCAATGAGTTaGGCAGGCGCAGCTCAGTCGGGAGCTGCGATATCC +
Preference number: 6 (lower is better)
Translates to: SLISIAILAPMS*AGAAQSGAAIS
Trigger: GGATATCGCAGCTCCCGACTGAGCTGCGCCTGCGCAACTCATTGGCGCCAAGATGGCGATGGAGATGAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491115.6
CDS CCA 72 bp GCGGCCCAGTCTCTCGCTAAGAGGCTTGCGAGCCACTaGAAGCCTCATCTCCATCGCCATCTTGGCGCCAAT +
Preference number: 6 (lower is better)
Translates to: AAQSLAKRLASH*KPHLHRHLGAN
Trigger: ATTGGCGCCAAGATGGCGATGGAGATGAGGCTTCCAGTGGCTCGCAAGCCTCTTAGCGAGAGACTGGGCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000372352.7
ENST00000372358.10
ENST00000430138.6
ENST00000490641.5
ENST00000491115.6
ENST00000546165.5
CDS CAA 72 bp TTGCGAGCCACTGGAAGCCTCATCTCCATCGCCATCTaGGCGCCAATGAGTTGCGCAGGCGCAGCTCAGTCG +
Preference number: 6 (lower is better)
Translates to: LRATGSLISIAI*APMSCAGAAQS
Trigger: CGACTGAGCTGCGCCTGCGCAACTCATTGGCGCCAAGATGGCGATGGAGATGAGGCTTCCAGTGGCTCGCAA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491115.6
CDS GCA 72 bp TGTCTGGTCCTGGCAGGACAGCTCAAGTCCACGTCCTaGCAAGGAAGAGTCCGCAGGACCCAGGGTTGTGAA +
Preference number: 6 (lower is better)
Translates to: CLVLAGQLKSTS*QGRVRRTQGCE
Trigger: TTCACAACCCTGGGTCCTGCGGACTCTTCCTTGGCAGGACGTGGACTTGAGCTGTCCTGCCAGGACCAGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467138.1
CDS CAA 72 bp AAGCCTCATCTCCATCGCCATCTTGGCGCCAATGAGTaGCGCAGGCGCAGCTCAGTCGGGAGCTGCGATATC +
Preference number: 6 (lower is better)
Translates to: KPHLHRHLGANE*RRRSSVGSCDI
Trigger: GATATCGCAGCTCCCGACTGAGCTGCGCCTGCGCAACTCATTGGCGCCAAGATGGCGATGGAGATGAGGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491115.6
CDS CAA 90 bp ACTAGATGTTTCTTAGTGTCGCGGCCCAGTCTCTCGCTAAGAGGCTaGCGAGCCACTGGAAGCCTCATCTCCATCGCCATCTTGGCGCCA +
Preference number: 6 (lower is better)
Translates to: TRCFLVSRPSLSLRG*RATGSLISIAILAP
Trigger: TGGCGCCAAGATGGCGATGGAGATGAGGCTTCCAGTGGCTCGCAAGCCTCTTAGCGAGAGACTGGGCCGCGACACTAAGAAACATCTAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000372352.7
ENST00000372358.10
ENST00000430138.6
ENST00000490641.5
ENST00000491115.6
ENST00000546165.5
CDS TCA 72 bp GTCCTGCCAAGGAAGAGTCCGCAGGACCCAGGGTTGTaGAAGTCAGCATACTGCAGCAGTCCTCTGCCTACT +
Preference number: 6 (lower is better)
Translates to: VLPRKSPQDPGL*KSAYCSSPLPT
Trigger: AGTAGGCAGAGGACTGCTGCAGTATGCTGACTTTCACAACCCTGGGTCCTGCGGACTCTTCCTTGGCAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467138.1
CDS GCA 72 bp CCTCGTGTGCAAAGAGACAGCTCCGTCAGAGAACACTaGCTGGACCTCAGCACTGATAAGGTCCCCTTCCTG +
Preference number: 6 (lower is better)
Translates to: PRVQRDSSVREH*LDLSTDKVPFL
Trigger: CAGGAAGGGGACCTTATCAGTGCTGAGGTCCAGGCAGTGTTCTCTGACGGAGCTGTCTCTTTGCACACGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372350.7
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000430138.6
CDS GCA 72 bp TGCCTCTGGGTAGGTAAGGAGATGGGTGGAGCTGGGTaGAAATCCATGTCTGGTCCTGGCAGGACAGCTCAA +
Preference number: 6 (lower is better)
Translates to: CLWVGKEMGGAG*KSMSGPGRTAQ
Trigger: TTGAGCTGTCCTGCCAGGACCAGACATGGATTTGCACCCAGCTCCACCCATCTCCTTACCTACCCAGAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467138.1
CDS CCA 72 bp CAGATCTTCTCCTCAGCTCTCCTCCAGGAAGGTTCATaGACGAGAGCAGCAAGACCGAATCCAGCCTGGAGT +
Preference number: 6 (lower is better)
Translates to: QIFSSALLQEGS*TRAARPNPAWS
Trigger: ACTCCAGGCTGGATTCGGTCTTGCTGCTCTCGTCCATGAACCTTCCTGGAGGAGAGCTGAGGAGAAGATCTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000372350.7
ENST00000372352.7
ENST00000372358.10
ENST00000430138.6
ENST00000463488.1
ENST00000495699.2
ENST00000546165.5
CDS GCA 72 bp ATCACAGTCTTCACTCCTGCAAGGTCCACAGTCCCGTaGTTCTGGAGCACCTCCTTATCCCTCCTGTTCCAA +
Preference number: 6 (lower is better)
Translates to: ITVFTPARSTVP*FWSTSLSLLFQ
Trigger: TTGGAACAGGAGGGATAAGGAGGTGCTCCAGAAGCACGGGACTGTGGACCTTGCAGGAGTGAAGACTGTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000430138.6
ENST00000467138.1
ENST00000546165.5
CDS CCA 72 bp GGTTCATGGACGAGAGCAGCAAGACCGAATCCAGCCTaGAGTTGGTCTCCACCTTCCACCTCTTCTGTTGAA +
Preference number: 6 (lower is better)
Translates to: GSWTRAARPNPA*SWSPPSTSSVE
Trigger: TTCAACAGAAGAGGTGGAAGGTGGAGACCAACTCCAGGCTGGATTCGGTCTTGCTGCTCTCGTCCATGAACC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000372350.7
ENST00000372352.7
ENST00000372358.10
ENST00000430138.6
ENST00000463488.1
ENST00000495699.2
ENST00000546165.5
CDS TCA 72 bp TTACCGAGAATCACTGAGGCACCACATGGCAAATCATaGAAGTGGGTCTTCTGCCGTTTCACCAGGGAGGGG +
Preference number: 6 (lower is better)
Translates to: LPRITEAPHGKS*KWVFCRFTREG
Trigger: CCCCTCCCTGGTGAAACGGCAGAAGACCCACTTTCATGATTTGCCATGTGGTGCCTCAGTGATTCTCGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000430138.6
ENST00000467138.1
ENST00000491115.6
ENST00000495699.2
ENST00000546165.5
CDS GCA 72 bp CAGGGTTGTGAAAGTCAGCATACTGCAGCAGTCCTCTaGCTACTCCATGTACATCAACGTGGCTGTCTGCAG +
Preference number: 6 (lower is better)
Translates to: QGCESQHTAAVL*LLHVHQRGCLQ
Trigger: CTGCAGACAGCCACGTTGATGTACATGGAGTAGGCAGAGGACTGCTGCAGTATGCTGACTTTCACAACCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467138.1
CDS GCA 72 bp TTCCCAGTCCCACAGAAAAGCATCAAGAGGCTGGAGTaGAAAGCGCAGGATACACTGATAAGGTCCCCTTCC +
Preference number: 6 (lower is better)
Translates to: FPVPQKSIKRLE*KAQDTLIRSPS
Trigger: GGAAGGGGACCTTATCAGTGTATCCTGCGCTTTGCACTCCAGCCTCTTGATGCTTTTCTGTGGGACTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463488.1
ENST00000490641.5
CDS CCA 72 bp TGCAGCAGTCCTCTGCCTACTCCATGTACATCAACGTaGCTGTCTGCAGCCACTCCATTAAGGGAAGAGGTT +
Preference number: 6 (lower is better)
Translates to: CSSPLPTPCTST*LSAATPLREEV
Trigger: AACCTCTTCCCTTAATGGAGTGGCTGCAGACAGCCACGTTGATGTACATGGAGTAGGCAGAGGACTGCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467138.1
CDS TCA 72 bp CAGTACAGGATGCTGGTATCATACAGCATCATCCTCTaGGTTACCAGCGAGATGATGCAGTTCCGAAGCCGG +
Preference number: 6 (lower is better)
Translates to: QYRMLVSYSIIL*VTSEMMQFRSR
Trigger: CCGGCTTCGGAACTGCATCATCTCGCTGGTAACTCAGAGGATGATGCTGTATGATACCAGCATCCTGTACTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000430138.6
ENST00000467138.1
ENST00000491115.6
ENST00000495699.2
ENST00000546165.5
CDS TCA 72 bp AGCTCATACCTGAACCCCAAACACTCATCTTGCCTGTaGGATGTGTGCCTCTGGGTAGGTAAGGAGATGGGT +
Preference number: 6 (lower is better)
Translates to: SSYLNPKHSSCL*DVCLWVGKEMG
Trigger: ACCCATCTCCTTACCTACCCAGAGGCACACATCTCACAGGCAAGATGAGTGTTTGGGGTTCAGGTATGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467138.1
CDS TCA 72 bp GGAGCACTGCGTTGTTCCATGACCCTAGCTCATACCTaGACCCCAAACACTCATCTTGCCTGTGAGATGTGT +
Preference number: 6 (lower is better)
Translates to: GALRCSMTLAHT*TPNTHLACEMC
Trigger: ACACATCTCACAGGCAAGATGAGTGTTTGGGGTTCAGGTATGAGCTAGGGTCATGGAACAACGCAGTGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467138.1
CDS CAA 90 bp GAGCAAGCTTTGCCAGCAATAACATCCACTGGACTGATTGGACGTTaGTCTAAGGGCTGTTTAACCAGACCCAGCCTGCCTTTGTTCCCA +
Preference number: 6 (lower is better)
Translates to: EQALPAITSTGLIGR*SKGCLTRPSLPLFP
Trigger: TGGGAACAAAGGCAGGCTGGGTCTGGTTAAACAGCCCTTAGACAAACGTCCAATCAGTCCAGTGGATGTTATTGCTGGCAAAGCTTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467138.1
CDS TCA 72 bp CCTCTTCTTTGTGCTCAGGTGTTGGGTAAATCCAGATaGAGCCGTTGTTACCGAGAATCACTGAGGCACCAC +
Preference number: 6 (lower is better)
Translates to: PLLCAQVLGKSR*SRCYRESLRHH
Trigger: GTGGTGCCTCAGTGATTCTCGGTAACAACGGCTTCATCTGGATTTACCCAACACCTGAGCACAAAGAAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000372350.7
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000430138.6
ENST00000467138.1
ENST00000491115.6
ENST00000495699.2
ENST00000546165.5
CDS GCA 72 bp TCCTCTGCCTACTCCATGTACATCAACGTGGCTGTCTaGAGCCACTCCATTAAGGGAAGAGGTTTTTGTTCC +
Preference number: 6 (lower is better)
Translates to: SSAYSMYINVAV*SHSIKGRGFCS
Trigger: GGAACAAAAACCTCTTCCCTTAATGGAGTGGCTGCAGACAGCCACGTTGATGTACATGGAGTAGGCAGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467138.1
CDS CCA 72 bp GAAGCCCCCTGCTTCCTCTTCTTTGTGCTCAGGTGTTaGGTAAATCCAGATGAAGCCGTTGTTACCGAGAAT +
Preference number: 6 (lower is better)
Translates to: EAPCFLFFVLRC*VNPDEAVVTEN
Trigger: ATTCTCGGTAACAACGGCTTCATCTGGATTTACCCAACACCTGAGCACAAAGAAGAGGAAGCAGGGGGCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000430138.6
ENST00000467138.1
ENST00000491115.6
ENST00000495699.2
ENST00000546165.5
CDS CAA 72 bp TTGCCAGCAATAACATCCACTGGACTGATTGGACGTTaGTCTAAGGGCTGTTTAACCAGACCCAGCCTGCCT +
Preference number: 6 (lower is better)
Translates to: LPAITSTGLIGR*SKGCLTRPSLP
Trigger: AGGCAGGCTGGGTCTGGTTAAACAGCCCTTAGACAAACGTCCAATCAGTCCAGTGGATGTTATTGCTGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467138.1
CDS TCA 72 bp TATCATACAGCATCATCCTCTGAGTTACCAGCGAGATaGTGCAGTTCCGAAGCCGGGATATCACCTCTCGAT +
Preference number: 6 (lower is better)
Translates to: YHTASSSELPAR*CSSEAGISPLD
Trigger: ATCGAGAGGTGATATCCCGGCTTCGGAACTGCATCATCTCGCTGGTAACTCAGAGGATGATGCTGTATGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000430138.6
ENST00000467138.1
ENST00000491115.6
ENST00000495699.2
ENST00000546165.5
CDS CCA 72 bp TTTGTGGGATGCCAGCCTCTATTAATGCTTAGCTACTaGGGTTCTTTAGGCCAGAATTCCAGAGAGCTATGG +
Preference number: 6 (lower is better)
Translates to: FVGCQPLLMLSY*GSLGQNSRELW
Trigger: CCATAGCTCTCTGGAATTCTGGCCTAAAGAACCCCAGTAGCTAAGCATTAATAGAGGCTGGCATCCCACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467138.1
CDS CAA 90 bp TCGCCTACATGCATACACATAGTACACATTTTTGCAGAGAACGCTTaGGGACTCAGAGGCTATTCATACATCCCAGCAGAAGGTGACCTT +
Preference number: 6 (lower is better)
Translates to: SPTCIHIVHIFAENA*GLRGYSYIPAEGDL
Trigger: AAGGTCACCTTCTGCTGGGATGTATGAATAGCCTCTGAGTCCCAAAGCGTTCTCTGCAAAAATGTGTACTATGTGTATGCATGTAGGCGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467138.1
CDS TCA 72 bp GTAAATCCAGATGAAGCCGTTGTTACCGAGAATCACTaGGGCACCACATGGCAAATCATGAAAGTGGGTCTT +
Preference number: 6 (lower is better)
Translates to: VNPDEAVVTENH*GTTWQIMKVGL
Trigger: AAGACCCACTTTCATGATTTGCCATGTGGTGCCTCAGTGATTCTCGGTAACAACGGCTTCATCTGGATTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000430138.6
ENST00000467138.1
ENST00000491115.6
ENST00000495699.2
ENST00000546165.5
CDS GCA 72 bp CAACTTGTTTACTCTCTCCACAGAGCCAGCAACAGATaGAATGAGCTTCTCTTCTCCCATATACGTTCCATG +
Preference number: 6 (lower is better)
Translates to: QLVYSLHRASNR*NELLFSHIRSM
Trigger: CATGGAACGTATATGGGAGAAGAGAAGCTCATTGCATCTGTTGCTGGCTCTGTGGAGAGAGTAAACAAGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000372350.7
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000430138.6
ENST00000463488.1
ENST00000490641.5
ENST00000491115.6
ENST00000495699.2
ENST00000546165.5
CDS GCA 72 bp TCTGATGTGGAAGGGATGCTTCATAGCAGTACAGGATaGTGGTATCATACAGCATCATCCTCTGAGTTACCA +
Preference number: 6 (lower is better)
Translates to: SDVEGMLHSSTG*WYHTASSSELP
Trigger: TGGTAACTCAGAGGATGATGCTGTATGATACCAGCATCCTGTACTGCTATGAAGCATCCCTTCCACATCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000372351.7
ENST00000372352.7
ENST00000372358.10
ENST00000430138.6
ENST00000467138.1
ENST00000491115.6
ENST00000546165.5
CDS TCA 72 bp GTAAATCCAGATGAAGCCGTTGTTACCGAGAATCACTaGGGCACCACATGGCAAATCATGAAAGTGGGTTTT +
Preference number: 6 (lower is better)
Translates to: VNPDEAVVTENH*GTTWQIMKVGF
Trigger: AAAACCCACTTTCATGATTTGCCATGTGGTGCCTCAGTGATTCTCGGTAACAACGGCTTCATCTGGATTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372350.7
CDS GCA 72 bp GATGTTACGTTTAAGGAACACGATCAGTTTGTGGGATaGCAGCCTCTATTAATGCTTAGCTACTGGGGTTCT +
Preference number: 6 (lower is better)
Translates to: DVTFKEHDQFVG*QPLLMLSYWGS
Trigger: AGAACCCCAGTAGCTAAGCATTAATAGAGGCTGGCATCCCACAAACTGATCGTGTTCCTTAAACGTAACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467138.1
CDS TCA 72 bp TTTGTAAACACCAATCTGATATCGACGTTACCTCTGTaGTTCGTCCCACTACGATGTCTCCTACTTCACCAA +
Preference number: 6 (lower is better)
Translates to: FVNTNLISTLPL*FVPLRCLLLHQ
Trigger: TTGGTGAAGTAGGAGACATCGTAGTGGGACGAATCACAGAGGTAACGTCGATATCAGATTGGTGTTTACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430138.6
CDS TCA 72 bp CTTTTTCATGTAACTACAAGTGGAATGACTGTCCCATaGATGAAATCGCCAGCCTGCCTCGACTTTGTAAAC +
Preference number: 6 (lower is better)
Translates to: LFHVTTSGMTVP*MKSPACLDFVN
Trigger: GTTTACAAAGTCGAGGCAGGCTGGCGATTTCATTCATGGGACAGTCATTCCACTTGTAGTTACATGAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430138.6
CDS CAA 72 bp TGCATACACATAGTACACATTTTTGCAGAGAACGCTTaGGGACTCAGAGGCTATTCATACATCCCAGCAGAA +
Preference number: 6 (lower is better)
Translates to: CIHIVHIFAENA*GLRGYSYIPAE
Trigger: TTCTGCTGGGATGTATGAATAGCCTCTGAGTCCCAAAGCGTTCTCTGCAAAAATGTGTACTATGTGTATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467138.1
CDS TCA 72 bp CACGAAGCTAGGTCACTGCAAGATTGGCGGGATGAATaGAAAGGAGACTACAGAATATACATCCTAAGTATA +
Preference number: 6 (lower is better)
Translates to: HEARSLQDWRDE*KGDYRIYILSI
Trigger: TATACTTAGGATGTATATTCTGTAGTCTCCTTTTCATTCATCCCGCCAATCTTGCAGTGACCTAGCTTCGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467138.1
CDS GCA 72 bp TACATCAGAAGCCACACAACGGCCAAATGCAATGAATaGCTTTTTCATGTAACTACAAGTGGAATGACTGTC +
Preference number: 6 (lower is better)
Translates to: YIRSHTTAKCNE*LFHVTTSGMTV
Trigger: GACAGTCATTCCACTTGTAGTTACATGAAAAAGGCATTCATTGCATTTGGCCGTTGTGTGGCTTCTGATGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430138.6
CDS GCA 72 bp GTTGAACCTATAAGCCAAGTTCCACACCTGGACACATaGTCCATGTTCATGTGTCATATCATAAATAACCAG +
Preference number: 6 (lower is better)
Translates to: VEPISQVPHLDT*SMFMCHIINNQ
Trigger: CTGGTTATTTATGATATGACACATGAACATGGAGCATGTGTCCAGGTGTGGAACTTGGCTTATAGGTTCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430138.6
CDS TCA 72 bp TATTTACATCAGAAGCCACACAACGGCCAAATGCAATaGATGCCTTTTTCATGTAACTACAAGTGGAATGAC +
Preference number: 6 (lower is better)
Translates to: YLHQKPHNGQMQ*MPFSCNYKWND
Trigger: GTCATTCCACTTGTAGTTACATGAAAAAGGCATTCATTGCATTTGGCCGTTGTGTGGCTTCTGATGTAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430138.6
CDS CAA 72 bp GGAGACTACAGAATATACATCCTAAGTATATTCAAATaGGTGTCCTTCCTGTTTATAATTGCTGTCGCCTAC +
Preference number: 6 (lower is better)
Translates to: GDYRIYILSIFK*VSFLFIIAVAY
Trigger: GTAGGCGACAGCAATTATAAACAGGAAGGACACCAATTTGAATATACTTAGGATGTATATTCTGTAGTCTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467138.1