RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EXOC7 (Homo sapiens)

Ensembl gene IDs: ENSG00000182473

Ensembl transcript IDs: ENST00000332065.9, ENST00000335146.11, ENST00000357231.8, ENST00000405068.3, ENST00000405575.8, ENST00000406660.4, ENST00000411744.6, ENST00000420116.1, ENST00000442951.5, ENST00000460476.5, ENST00000465252.5, ENST00000467586.5, ENST00000467929.6, ENST00000486053.1, ENST00000494787.6, ENST00000589210.6, ENST00000589507.6, ENST00000592559.1, ENST00000607838.5, ENST00000634349.1

Found 844 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AAGTCGGGAGGAGGCCGACAGAGGGCTGCTGGAGGCGGGTGGGAGTaGGGATGCACGGCCAGAGGCCAGGCCCCATGCCCCCGATGCCCA +
Preference number: 1 (lower is better)
Translates to: KSGGGRQRAAGGGWE*GCTARGQAPCPRCP
Trigger: TGGGCATCGGGGGCATGGGGCCTGGCCTCTGGCCGTGCATCCTCACTCCCACCCGCCTCCAGCAGCCCTCTGTCGGCCTCCTCCCGACTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
3UTR CCA 90 bp CCTGCTCCCTTACCCAGTCTGCCCTGTTTCTCCCCGGTCACCCACTaGTGCTCAGCTCGCTGGGCACCAGAGACACAGGGACTGGCCCCT +
Preference number: 1 (lower is better)
Translates to: PAPLPSLPCFSPVTH*CSARWAPETQGLAP
Trigger: AGGGGCCAGTCCCTGTGTCTCTGGTGCCCAGCGAGCTGAGCACCAGTGGGTGACCGGGGAGAAACAGGGCAGACTGGGTAAGGGAGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
3UTR CCA 90 bp AGTCTGCCCTGTTTCTCCCCGGTCACCCACTGGTGCTCAGCTCGCTaGGCACCAGAGACACAGGGACTGGCCCCTGAGCATCTCCCTGTG +
Preference number: 1 (lower is better)
Translates to: SLPCFSPVTHWCSAR*APETQGLAPEHLPV
Trigger: CACAGGGAGATGCTCAGGGGCCAGTCCCTGTGTCTCTGGTGCCCAGCGAGCTGAGCACCAGTGGGTGACCGGGGAGAAACAGGGCAGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
3UTR CCA 90 bp GGCAGGGCCTGGGCTGCACACCTTAGGATGAAGTTTGCTTTCCCATaGCTGGGGGCGGGCCATGACAGGGCCTCTGGATTAAGCCACCCT +
Preference number: 1 (lower is better)
Translates to: GRAWAAHLRMKFAFP*LGAGHDRASGLSHP
Trigger: AGGGTGGCTTAATCCAGAGGCCCTGTCATGGCCCGCCCCCAGCCATGGGAAAGCAAACTTCATCCTAAGGTGTGCAGCCCAGGCCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR GCA 90 bp CTGTGCACCCAATTCGTCTTTGCAGGAATCTGGATGTGGGCAGCGTaGAAGTCTGACGCAGCCCCTGGAGAGGCTGCACCCCATGGCAGG +
Preference number: 1 (lower is better)
Translates to: LCTQFVFAGIWMWAA*KSDAAPGEAAPHGR
Trigger: CCTGCCATGGGGTGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGATTCCTGCAAAGACGAATTGGGTGCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR CCA 90 bp CTCCCCACAGAGCCCTCCAGAGGAGTAAAGGGGTCACAGAGAAGCTaGCCTGAGACTGCTGACCGCATCTTCTTCCTCGTGTATGTGGTT +
Preference number: 1 (lower is better)
Translates to: LPTEPSRGVKGSQRS*PETADRIFFLVYVV
Trigger: AACCACATACACGAGGAAGAAGATGCGGTCAGCAGTCTCAGGCCAGCTTCTCTGTGACCCCTTTACTCCTCTGGAGGGCTCTGTGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR GCA 90 bp ACTGCTGACCGCATCTTCTTCCTCGTGTATGTGGTTGGGGTGCTGTaGACCCAATTCGTCTTTGCAGGAATCTGGATGTGGGCAGCGTGC +
Preference number: 1 (lower is better)
Translates to: TADRIFFLVYVVGVL*TQFVFAGIWMWAAC
Trigger: GCACGCTGCCCACATCCAGATTCCTGCAAAGACGAATTGGGTGCACAGCACCCCAACCACATACACGAGGAAGAAGATGCGGTCAGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR GCA 90 bp CTGAGACTGCTGACCGCATCTTCTTCCTCGTGTATGTGGTTGGGGTaGTGTGCACCCAATTCGTCTTTGCAGGAATCTGGATGTGGGCAG +
Preference number: 1 (lower is better)
Translates to: LRLLTASSSSCMWLG*CAPNSSLQESGCGQ
Trigger: CTGCCCACATCCAGATTCCTGCAAAGACGAATTGGGTGCACAGCACCCCAACCACATACACGAGGAAGAAGATGCGGTCAGCAGTCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR-3UTR CCA 90 bp TCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCACCCCGCAACCACGACTGCCTaGCCCTGGGCCAAGAGGCAC +
Preference number: 2 (lower is better)
Translates to: SGCGQRASLTQPLERLHPATTTA*PWAKRH
Trigger: GTGCCTCTTGGCCCAGGGCCAGGCAGTCGTGGTTGC...GGGGTGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR-3UTR TCA 90 bp TCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCACCCCAGGGAAAATGGCCAGTaGGCCTGCCTCCCCCAGCCA +
Preference number: 2 (lower is better)
Translates to: SGCGQRASLTQPLERLHPRENGQ*ACLPQP
Trigger: TGGCTGGGGGAGGCAGGCTCACTGGCCATTTTCCCT...GGGGTGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR-3UTR CCA 90 bp TCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCACCCCCAGCTCCCGGAGGCGTaGAGACAGGTCTCTGTCCCA +
Preference number: 2 (lower is better)
Translates to: SGCGQRASLTQPLERLHPQLPEA*RQVSVP
Trigger: TGGGACAGAGACCTGTCTCCACGCCTCCGGGAGCTG...GGGGTGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR-3UTR CCA 90 bp TCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCACCCCCTTCCGGGAGAGTGCTaGTTCGGCTGGGAACACGGG +
Preference number: 2 (lower is better)
Translates to: SGCGQRASLTQPLERLHPLPGEC*FGWEHG
Trigger: CCCGTGTTCCCAGCCGAACCAGCACTCTCCCGGAAG...GGGGTGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR-3UTR GCA 90 bp TCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCACCCCGGGGTCAGTCCCGACTaGCTTTCCTCCAGGAGCTCT +
Preference number: 2 (lower is better)
Translates to: SGCGQRASLTQPLERLHPGVSPD*LSSRSS
Trigger: AGAGCTCCTGGAGGAAAGGCAGTCGGGACTGACCCC...GGGGTGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR-3UTR GCA 90 bp TCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCACCCCGCCCTTCTGCCCTGCTaGTCTTGGTACACATGGAGC +
Preference number: 2 (lower is better)
Translates to: SGCGQRASLTQPLERLHPALLPC*SWYTWS
Trigger: GCTCCATGTGTACCAAGAGCAGCAGGGCAGAAGGGC...GGGGTGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR-3UTR GCA 90 bp GGTGGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGGCCCTTCTGCCCTGCTaGTCTTGGTACACATGGAGC +
Preference number: 2 (lower is better)
Translates to: GGAELLLRTPPAVCWTLGALLPC*SWYTWS
Trigger: GCTCCATGTGTACCAAGAGCAGCAGGGCAGAAGGGC...CCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR-3UTR GCA 90 bp AGGCTGCACCCCATGGCAGGCGGCCTAGACTGTAAAGGGGCAGGGCCTGGGCTGCCTAATTGCTCCTTCTaGAACCACGACTGCCTGGCC +
Preference number: 2 (lower is better)
Translates to: RLHPMAGGLDCKGAGPGLPNCSF*NHDCLA
Trigger: GGCCAGGCAGTCGTGGTTGCAGAAGGAGCAATTAGG...CAGCCCAGGCCCTGCCCCTTTACAGTCTAGGCCGCCTGCCATGGGGTGCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR-3UTR CCA 90 bp GGAATCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCACTTCCGGGAGAGTGCTaGTTCGGCTGGGAACACGGG +
Preference number: 2 (lower is better)
Translates to: GIWMWAACKSDAAPGEAALPGEC*FGWEHG
Trigger: CCCGTGTTCCCAGCCGAACCAGCACTCTCCCGGAAG...TGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGATTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR-3UTR CCA 90 bp TCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCACCCCGCCCTGCCACATCTCTaGGCTGTAGGGGAGTTCTCT +
Preference number: 2 (lower is better)
Translates to: SGCGQRASLTQPLERLHPALPHL*AVGEFS
Trigger: AGAGAACTCCCCTACAGCCCAGAGATGTGGCAGGGC...GGGGTGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR-3UTR CCA 90 bp AGGCTGCACCCCATGGCAGGCGGCCTAGACTGTAAAGGGGCAGGGCCTGGGCTGCCTCCTGCAGTGTGCTaGACTCTAGGGAAAATGGCC +
Preference number: 2 (lower is better)
Translates to: RLHPMAGGLDCKGAGPGLPPAVC*TLGKMA
Trigger: GGCCATTTTCCCTAGAGTCCAGCACACTGCAGGAGG...CAGCCCAGGCCCTGCCCCTTTACAGTCTAGGCCGCCTGCCATGGGGTGCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR-3UTR GCA 90 bp GGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGAAAGGGGTCAGTCCCGACTaGCTTTCCTCCAGGAGCTCT +
Preference number: 2 (lower is better)
Translates to: GAELLLRTPPAVCWTLGKGVSPD*LSSRSS
Trigger: AGAGCTCCTGGAGGAAAGGCAGTCGGGACTGACCCC...TTTCCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR-3UTR CCA 90 bp TCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCACCCCCTGCCCTGCTGCTCTTaGTACACATGGAGCAGCAGT +
Preference number: 2 (lower is better)
Translates to: SGCGQRASLTQPLERLHPLPCCS*YTWSSS
Trigger: ACTGCTGCTCCATGTGTACCAAGAGCAGCAGGGCAG...GGGGTGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR-3UTR CCA 90 bp CTCAGAGCTGTAGCTGGTGGCCGAAGAGCTGGTCTCTTGGGAGGCCAGCATGGCCTGGCAGCCGTGCCCTaGAGCACCTGGTCAAACTCA +
Preference number: 2 (lower is better)
Translates to: LRAVAGGRRAGLLGGQHGLAAVP*STWSNS
Trigger: TGAGTTTGACCAGGTGCTCCAGGGCACGGCTGCCAG...GCCATGCTGGCCTCCCAAGAGACCAGCTCTTCGGCCACCAGCTACAGCTCTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592559.1
3UTR-3UTR TCA 90 bp GGCCTGAGACTGCTGACCGCATCTTCTTCCTCGTGTATGTGGTTGGGGTGCTGTGCTGGGGGCGGGCCATaGCAGGGCCTCTGGATTAAG +
Preference number: 2 (lower is better)
Translates to: GLRLLTASSSSCMWLGCCAGGGP*QGLWIK
Trigger: CTTAATCCAGAGGCCCTGTCATGGCCCGCCCCCAGC...ACAGCACCCCAACCACATACACGAGGAAGAAGATGCGGTCAGCAGTCTCAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR-3UTR GCA 90 bp TGTGCACCCAATTCGTCTTTGCAGGAATCTGGATGTGGGCAGCGTGCAAGTCTGAGCCCCTGGAGAGGCTaGACCCCATGGCAGGCGGCC +
Preference number: 2 (lower is better)
Translates to: CAPNSSLQESGCGQRASLSPWRG*TPWQAA
Trigger: GGCCGCCTGCCATGGGGTGCAGCCTCTCCAGGGGCT...CAGACTTGCACGCTGCCCACATCCAGATTCCTGCAAAGACGAATTGGGTGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR-3UTR CCA 90 bp GGAATCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCAAAGTTTGCTTTCCCATaGCTGGGGGCGGGCCATGAC +
Preference number: 2 (lower is better)
Translates to: GIWMWAACKSDAAPGEAAKFAFP*LGAGHD
Trigger: GTCATGGCCCGCCCCCAGCCATGGGAAAGCAAACTT...TGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGATTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR-3UTR GCA 90 bp GGAATCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCACCTAATTGCTCCTTCTaGAACCACGACTGCCTGGCC +
Preference number: 2 (lower is better)
Translates to: GIWMWAACKSDAAPGEAAPNCSF*NHDCLA
Trigger: GGCCAGGCAGTCGTGGTTGCAGAAGGAGCAATTAGG...TGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGATTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR-3UTR CCA 90 bp CCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGAACACGGGCTGTGGGGAAAAAAATGACACGCCAGTCTaGTGGAACCAGGCAGGGCTA +
Preference number: 2 (lower is better)
Translates to: PGFRESAGSAGNTGCGEKNDTPV*WNQAGL
Trigger: TAGCCCTGCCTGGTTCCACCAGACTGGCGTGTCATT...TTTTTCCCCACAGCCCGTGTTCCCAGCCGAACCAGCACTCTCCCGGAAGCCTGG
60% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR-3UTR CCA 90 bp GGGACACAGCTCCCGGAGGCGTGGAGACAGGTCTCTGTCCCAGAGGACTTCAAGAATGACACGCCAGTCTaGTGGAACCAGGCAGGGCTA +
Preference number: 2 (lower is better)
Translates to: GTQLPEAWRQVSVPEDFKNDTPV*WNQAGL
Trigger: TAGCCCTGCCTGGTTCCACCAGACTGGCGTGTCATT...CTTGAAGTCCTCTGGGACAGAGACCTGTCTCCACGCCTCCGGGAGCTGTGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR-3UTR GCA 90 bp TTTTCCCCATTGTCCCTGTCTCCCAGCCCACAGGCAGGCAGCCTAATTGCTCCTTCCAGGAGCTCTGGCTaGTTCTCTGAGCCCTGCCAC +
Preference number: 2 (lower is better)
Translates to: FSPLSLSPSPQAGSLIAPSRSSG*FSEPCH
Trigger: GTGGCAGGGCTCAGAGAAGCAGCCAGAGCTCCTGGA...AGGAGCAATTAGGCTGCCTGCCTGTGGGCTGGGAGACAGGGACAATGGGGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR-3UTR GCA 90 bp GGCCTGAGACTGCTGACCGCATCTTCTTCCTCGTGTATGTGGTTGGGGTGCTGTTCCAGGAGCTCTGGCTaGTTCTCTGAGCCCTGCCAC +
Preference number: 2 (lower is better)
Translates to: GLRLLTASSSSCMWLGCCSRSSG*FSEPCH
Trigger: GTGGCAGGGCTCAGAGAAGCAGCCAGAGCTCCTGGA...ACAGCACCCCAACCACATACACGAGGAAGAAGATGCGGTCAGCAGTCTCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR-3UTR GCA 90 bp GGCCTGAGACTGCTGACCGCATCTTCTTCCTCGTGTATGTGGTTGGGGTGCTGTCCTCCGAACGCCTCCTaGAGTGTGCTGGACTCTAGG +
Preference number: 2 (lower is better)
Translates to: GLRLLTASSSSCMWLGCCPPNAS*SVLDSR
Trigger: CCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGG...ACAGCACCCCAACCACATACACGAGGAAGAAGATGCGGTCAGCAGTCTCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR-3UTR GCA 90 bp GGCCTGAGACTGCTGACCGCATCTTCTTCCTCGTGTATGTGGTTGGGGTGCTGTTTCTGCAACCACGACTaGCTGGCCCTGGGCCAAGAG +
Preference number: 2 (lower is better)
Translates to: GLRLLTASSSSCMWLGCCFCNHD*LALGQE
Trigger: CTCTTGGCCCAGGGCCAGGCAGTCGTGGTTGCAGAA...ACAGCACCCCAACCACATACACGAGGAAGAAGATGCGGTCAGCAGTCTCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR-3UTR TCA 90 bp AAAAGCCAAGGTGTGGAGGGACCCCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGTTTATCTGTCCAATaGCACGCCAGTCTGGTGGAA +
Preference number: 2 (lower is better)
Translates to: KSQGVEGPQASGRVLVRLGLSVQ*HASLVE
Trigger: TTCCACCAGACTGGCGTGTCATTGGACAGATAAACC...CAGCCGAACCAGCACTCTCCCGGAAGCCTGGGGTCCCTCCACACCTTGGCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR-3UTR TCA 90 bp CTCAGGGACACAGCTCCCGGAGGCGTGGAGACAGGTCTCTGTCCCAGAGGACTTGGTTTATCTGTCCAATaGCACGCCAGTCTGGTGGAA +
Preference number: 2 (lower is better)
Translates to: LRDTAPGGVETGLCPRGLGLSVQ*HASLVE
Trigger: TTCCACCAGACTGGCGTGTCATTGGACAGATAAACC...AAGTCCTCTGGGACAGAGACCTGTCTCCACGCCTCCGGGAGCTGTGTCCCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR-3UTR TCA 90 bp GCAAGTGTGCCTCAAGGGTCAGTCTTCAATCTCGTCCTAAATAGGTGGGGCCCTAGGGAAAATGGCCAGTaGGCCTGCCTCCCCCAGCCA +
Preference number: 2 (lower is better)
Translates to: ASVPQGSVFNLVLNRWGPRENGQ*ACLPQP
Trigger: TGGCTGGGGGAGGCAGGCTCACTGGCCATTTTCCCT...AGGGCCCCACCTATTTAGGACGAGATTGAAGACTGACCCTTGAGGCACACTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR-3UTR TCA 90 bp CATGTTGAGGGGACCTTGAAGAACAGCTCCTTTCCCTGTATCTCTCCCCACAGAGCTGGGGGCGGGCCATaGCAGGGCCTCTGGATTAAG +
Preference number: 2 (lower is better)
Translates to: HVEGTLKNSSFPCISPHRAGGGP*QGLWIK
Trigger: CTTAATCCAGAGGCCCTGTCATGGCCCGCCCCCAGC...TCTGTGGGGAGAGATACAGGGAAAGGAGCTGTTCTTCAAGGTCCCCTCAACATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR-3UTR GCA 90 bp TTTCCCTGTATCTCTCCCCACAGAGCCCTCCAGAGGAGTAAAGGGGTCACAGAGCCTCCGAACGCCTCCTaGAGTGTGCTGGACTCTAGG +
Preference number: 2 (lower is better)
Translates to: FPCISPHRALQRSKGVTEPPNAS*SVLDSR
Trigger: CCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGG...CTCTGTGACCCCTTTACTCCTCTGGAGGGCTCTGTGGGGAGAGATACAGGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR-3UTR CCA 90 bp TGTGCACCCAATTCGTCTTTGCAGGAATCTGGATGTGGGCAGCGTGCAAGTCTGTTGCTTTCCCATGGCTaGGGGCGGGCCATGACAGGG +
Preference number: 2 (lower is better)
Translates to: CAPNSSLQESGCGQRASLLLSHG*GRAMTG
Trigger: CCCTGTCATGGCCCGCCCCCAGCCATGGGAAAGCAA...CAGACTTGCACGCTGCCCACATCCAGATTCCTGCAAAGACGAATTGGGTGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR-3UTR TCA 90 bp TGTGCACCCAATTCGTCTTTGCAGGAATCTGGATGTGGGCAGCGTGCAAGTCTGCTCTGGCTGCTTCTCTaGGCCCTGCCACATCTCTGG +
Preference number: 2 (lower is better)
Translates to: CAPNSSLQESGCGQRASLLWLLL*ALPHLW
Trigger: CCAGAGATGTGGCAGGGCTCAGAGAAGCAGCCAGAG...CAGACTTGCACGCTGCCCACATCCAGATTCCTGCAAAGACGAATTGGGTGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR-3UTR TCA 90 bp CATGTTGAGGGGACCTTGAAGAACAGCTCCTTTCCCTGTATCTCTCCCCACAGAAGGGAAAATGGCCAGTaGGCCTGCCTCCCCCAGCCA +
Preference number: 2 (lower is better)
Translates to: HVEGTLKNSSFPCISPHRRENGQ*ACLPQP
Trigger: TGGCTGGGGGAGGCAGGCTCACTGGCCATTTTCCCT...TCTGTGGGGAGAGATACAGGGAAAGGAGCTGTTCTTCAAGGTCCCCTCAACATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR-3UTR GCA 90 bp GCAAGTGTGCCTCAAGGGTCAGTCTTCAATCTCGTCCTAAATAGGTGGGGCCCTAGGCTTCCGGGAGAGTaGTGGTTCGGCTGGGAACAC +
Preference number: 2 (lower is better)
Translates to: ASVPQGSVFNLVLNRWGPRLPGE*WFGWEH
Trigger: GTGTTCCCAGCCGAACCAGCACTCTCCCGGAAGCCT...AGGGCCCCACCTATTTAGGACGAGATTGAAGACTGACCCTTGAGGCACACTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR-3UTR CCA 90 bp TTTCCCTGTATCTCTCCCCACAGAGCCCTCCAGAGGAGTAAAGGGGTCACAGAGTGGGAACACGGGCTGTaGGGAAAAAGCAGGAGCCAG +
Preference number: 2 (lower is better)
Translates to: FPCISPHRALQRSKGVTEWEHGL*GKSRSQ
Trigger: CTGGCTCCTGCTTTTTCCCCACAGCCCGTGTTCCCA...CTCTGTGACCCCTTTACTCCTCTGGAGGGCTCTGTGGGGAGAGATACAGGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR-3UTR TCA 90 bp CATGTTGAGGGGACCTTGAAGAACAGCTCCTTTCCCTGTATCTCTCCCCACAGACTCTGGCTGCTTCTCTaGGCCCTGCCACATCTCTGG +
Preference number: 2 (lower is better)
Translates to: HVEGTLKNSSFPCISPHRLWLLL*ALPHLW
Trigger: CCAGAGATGTGGCAGGGCTCAGAGAAGCAGCCAGAG...TCTGTGGGGAGAGATACAGGGAAAGGAGCTGTTCTTCAAGGTCCCCTCAACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR-3UTR GCA 90 bp CATGTTGAGGGGACCTTGAAGAACAGCTCCTTTCCCTGTATCTCTCCCCACAGAGGGGTCAGTCCCGACTaGCTTTCCTCCAGGAGCTCT +
Preference number: 2 (lower is better)
Translates to: HVEGTLKNSSFPCISPHRGVSPD*LSSRSS
Trigger: AGAGCTCCTGGAGGAAAGGCAGTCGGGACTGACCCC...TCTGTGGGGAGAGATACAGGGAAAGGAGCTGTTCTTCAAGGTCCCCTCAACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR-3UTR GCA 90 bp CATGTTGAGGGGACCTTGAAGAACAGCTCCTTTCCCTGTATCTCTCCCCACAGATTCTGCAACCACGACTaGCTGGCCCTGGGCCAAGAG +
Preference number: 2 (lower is better)
Translates to: HVEGTLKNSSFPCISPHRFCNHD*LALGQE
Trigger: CTCTTGGCCCAGGGCCAGGCAGTCGTGGTTGCAGAA...TCTGTGGGGAGAGATACAGGGAAAGGAGCTGTTCTTCAAGGTCCCCTCAACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR-3UTR GCA 90 bp TTTCCCTGTATCTCTCCCCACAGAGCCCTCCAGAGGAGTAAAGGGGTCACAGAGCCTAATTGCTCCTTCTaGAACCACGACTGCCTGGCC +
Preference number: 2 (lower is better)
Translates to: FPCISPHRALQRSKGVTEPNCSF*NHDCLA
Trigger: GGCCAGGCAGTCGTGGTTGCAGAAGGAGCAATTAGG...CTCTGTGACCCCTTTACTCCTCTGGAGGGCTCTGTGGGGAGAGATACAGGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR-3UTR GCA 90 bp CATGTTGAGGGGACCTTGAAGAACAGCTCCTTTCCCTGTATCTCTCCCCACAGATGGATGTGGGCAGCGTaGAAGTCTGACGCAGCCCCT +
Preference number: 2 (lower is better)
Translates to: HVEGTLKNSSFPCISPHRWMWAA*KSDAAP
Trigger: AGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCA...TCTGTGGGGAGAGATACAGGGAAAGGAGCTGTTCTTCAAGGTCCCCTCAACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR CAA 90 bp ATGGCATTGCTGGTGAGCTCGTGTACGGTGCCGTCCTTCGGCATGTaGTACTCCTTGTCCGGGTCATTCTTGATGTTGTCTGCGAAGTCC +
Preference number: 2 (lower is better)
Translates to: MALLVSSCTVPSFGM*YSLSGSFLMLSAKS
Trigger: GGACTTCGCAGACAACATCAAGAATGACCCGGACAAGGAGTACAACATGCCGAAGGACGGCACCGTACACGAGCTCACCAGCAATGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592559.1
3UTR-3UTR TCA 90 bp GGCCTGAGACTGCTGACCGCATCTTCTTCCTCGTGTATGTGGTTGGGGTGCTGTGGTTTATCTGTCCAATaGCACGCCAGTCTGGTGGAA +
Preference number: 2 (lower is better)
Translates to: GLRLLTASSSSCMWLGCCGLSVQ*HASLVE
Trigger: TTCCACCAGACTGGCGTGTCATTGGACAGATAAACC...ACAGCACCCCAACCACATACACGAGGAAGAAGATGCGGTCAGCAGTCTCAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR-3UTR TCA 90 bp CATGTTGAGGGGACCTTGAAGAACAGCTCCTTTCCCTGTATCTCTCCCCACAGATGGATTAAGCCACCCTaGGCTCTCCCTCCGCTAGCA +
Preference number: 2 (lower is better)
Translates to: HVEGTLKNSSFPCISPHRWIKPP*ALPPLA
Trigger: TGCTAGCGGAGGGAGAGCTCAGGGTGGCTTAATCCA...TCTGTGGGGAGAGATACAGGGAAAGGAGCTGTTCTTCAAGGTCCCCTCAACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR-3UTR CCA 90 bp CATGTTGAGGGGACCTTGAAGAACAGCTCCTTTCCCTGTATCTCTCCCCACAGAGCCCTGCCACATCTCTaGGCTGTAGGGGAGTTCTCT +
Preference number: 2 (lower is better)
Translates to: HVEGTLKNSSFPCISPHRALPHL*AVGEFS
Trigger: AGAGAACTCCCCTACAGCCCAGAGATGTGGCAGGGC...TCTGTGGGGAGAGATACAGGGAAAGGAGCTGTTCTTCAAGGTCCCCTCAACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR-3UTR GCA 90 bp TTTCCCTGTATCTCTCCCCACAGAGCCCTCCAGAGGAGTAAAGGGGTCACAGAGCACCCAATTCGTCTTTaGAGGAATCTGGATGTGGGC +
Preference number: 2 (lower is better)
Translates to: FPCISPHRALQRSKGVTEHPIRL*RNLDVG
Trigger: GCCCACATCCAGATTCCTGCAAAGACGAATTGGGTG...CTCTGTGACCCCTTTACTCCTCTGGAGGGCTCTGTGGGGAGAGATACAGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR-3UTR CCA 90 bp CATGTTGAGGGGACCTTGAAGAACAGCTCCTTTCCCTGTATCTCTCCCCACAGAAATGACACGCCAGTCTaGTGGAACCAGGCAGGGCTA +
Preference number: 2 (lower is better)
Translates to: HVEGTLKNSSFPCISPHRNDTPV*WNQAGL
Trigger: TAGCCCTGCCTGGTTCCACCAGACTGGCGTGTCATT...TCTGTGGGGAGAGATACAGGGAAAGGAGCTGTTCTTCAAGGTCCCCTCAACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR-3UTR CCA 90 bp CATGTTGAGGGGACCTTGAAGAACAGCTCCTTTCCCTGTATCTCTCCCCACAGATCTTCCTCGTGTATGTaGTTGGGGTGCTGTGCACCC +
Preference number: 2 (lower is better)
Translates to: HVEGTLKNSSFPCISPHRSSSCM*LGCCAP
Trigger: GGGTGCACAGCACCCCAACCACATACACGAGGAAGA...TCTGTGGGGAGAGATACAGGGAAAGGAGCTGTTCTTCAAGGTCCCCTCAACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR-3UTR TCA 90 bp CATGTTGAGGGGACCTTGAAGAACAGCTCCTTTCCCTGTATCTCTCCCCACAGACACAAGCACAGAGCGTaGAATAAACCCATCTCCAGT +
Preference number: 2 (lower is better)
Translates to: HVEGTLKNSSFPCISPHRHKHRA*NKPISS
Trigger: ACTGGAGATGGGTTTATTTCACGCTCTGTGCTTGTG...TCTGTGGGGAGAGATACAGGGAAAGGAGCTGTTCTTCAAGGTCCCCTCAACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR CCA 72 bp TGTTTCTCCCCGGTCACCCACTGGTGCTCAGCTCGCTaGGCACCAGAGACACAGGGACTGGCCCCTGAGCAT +
Preference number: 3 (lower is better)
Translates to: CFSPVTHWCSAR*APETQGLAPEH
Trigger: ATGCTCAGGGGCCAGTCCCTGTGTCTCTGGTGCCCAGCGAGCTGAGCACCAGTGGGTGACCGGGGAGAAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
3UTR TCA 72 bp CTTTGCAGGAATCTGGATGTGGGCAGCGTGCAAGTCTaGCGCAGCCCCTGGAGAGGCTGCACCCCATGGCAG +
Preference number: 3 (lower is better)
Translates to: LCRNLDVGSVQV*RSPWRGCTPWQ
Trigger: CTGCCATGGGGTGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGATTCCTGCAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR CCA 72 bp TTACCCAGTCTGCCCTGTTTCTCCCCGGTCACCCACTaGTGCTCAGCTCGCTGGGCACCAGAGACACAGGGA +
Preference number: 3 (lower is better)
Translates to: LPSLPCFSPVTH*CSARWAPETQG
Trigger: TCCCTGTGTCTCTGGTGCCCAGCGAGCTGAGCACCAGTGGGTGACCGGGGAGAAACAGGGCAGACTGGGTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
3UTR-3UTR CAA 90 bp TCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCACCCCCTTAACTTTTCCCCATaGTCCCTGTCTCCCAGCCCA +
Preference number: 3 (lower is better)
Translates to: SGCGQRASLTQPLERLHPLNFSP*SLSPSP
Trigger: TGGGCTGGGAGACAGGGACAATGGGGAAAAGTTAAG...GGGGTGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR GCA 72 bp CAATTCGTCTTTGCAGGAATCTGGATGTGGGCAGCGTaGAAGTCTGACGCAGCCCCTGGAGAGGCTGCACCC +
Preference number: 3 (lower is better)
Translates to: QFVFAGIWMWAA*KSDAAPGEAAP
Trigger: GGGTGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGATTCCTGCAAAGACGAATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR CCA 72 bp TGGGCTGCACACCTTAGGATGAAGTTTGCTTTCCCATaGCTGGGGGCGGGCCATGACAGGGCCTCTGGATTA +
Preference number: 3 (lower is better)
Translates to: WAAHLRMKFAFP*LGAGHDRASGL
Trigger: TAATCCAGAGGCCCTGTCATGGCCCGCCCCCAGCCATGGGAAAGCAAACTTCATCCTAAGGTGTGCAGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR CCA 72 bp CTGTGCACCCAATTCGTCTTTGCAGGAATCTGGATGTaGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAG +
Preference number: 3 (lower is better)
Translates to: LCTQFVFAGIWM*AACKSDAAPGE
Trigger: CTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGATTCCTGCAAAGACGAATTGGGTGCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR-3UTR CAA 90 bp TTTCCCTGTATCTCTCCCCACAGAGCCCTCCAGAGGAGTAAAGGGGTCACAGAGTCTGCCCTGCTGCTCTaGGTACACATGGAGCAGCAG +
Preference number: 3 (lower is better)
Translates to: FPCISPHRALQRSKGVTESALLL*VHMEQQ
Trigger: CTGCTGCTCCATGTGTACCAAGAGCAGCAGGGCAGA...CTCTGTGACCCCTTTACTCCTCTGGAGGGCTCTGTGGGGAGAGATACAGGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR GCA 72 bp CGGGAATGTGTTTTAAGAGAGGGGGTCAGTCCCGACTaGCTTTCCTCCAGGAGCTCTGGCTGCTTCTCTGAG +
Preference number: 3 (lower is better)
Translates to: RECVLREGVSPD*LSSRSSGCFSE
Trigger: CTCAGAGAAGCAGCCAGAGCTCCTGGAGGAAAGGCAGTCGGGACTGACCCCCTCTCTTAAAACACATTCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR CCA 72 bp CCTGGGCTCCAGTCTGCTACCCCCAGACTTGGCAGCTaGGATCTCTCCTTCCTGGTTCATAGTTCTCATTCC +
Preference number: 3 (lower is better)
Translates to: PGLQSATPRLGS*DLSFLVHSSHS
Trigger: GGAATGAGAACTATGAACCAGGAAGGAGAGATCCCAGCTGCCAAGTCTGGGGGTAGCAGACTGGAGCCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
3UTR GCA 72 bp CGCATCTTCTTCCTCGTGTATGTGGTTGGGGTGCTGTaGACCCAATTCGTCTTTGCAGGAATCTGGATGTGG +
Preference number: 3 (lower is better)
Translates to: RIFFLVYVVGVL*TQFVFAGIWMW
Trigger: CCACATCCAGATTCCTGCAAAGACGAATTGGGTGCACAGCACCCCAACCACATACACGAGGAAGAAGATGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR GCA 72 bp CTGACCGCATCTTCTTCCTCGTGTATGTGGTTGGGGTaGTGTGCACCCAATTCGTCTTTGCAGGAATCTGGA +
Preference number: 3 (lower is better)
Translates to: LTASSSSCMWLG*CAPNSSLQESG
Trigger: TCCAGATTCCTGCAAAGACGAATTGGGTGCACAGCACCCCAACCACATACACGAGGAAGAAGATGCGGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
3UTR CCA 72 bp AACTGGAGACAATTTGGGATGTTGCAAAACAAGGTTTaGGAAGCCCTTCTATGGATCGGTTTTGTGTCCAAG +
Preference number: 3 (lower is better)
Translates to: NWRQFGMLQNKV*EALLWIGFVSK
Trigger: CTTGGACACAAAACCGATCCATAGAAGGGCTTCCCAAACCTTGTTTTGCAACATCCCAAATTGTCTCCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR TCA 90 bp GGTGGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGGGCAGCGTGCAAGTCTaGCGCAGCCCCTGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: GGAELLLRTPPAVCWTLGGSVQV*RSPWRG
Trigger: GCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCC...CCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp TCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCACCCCGGCAGCGTGCAAGTCTaGCGCAGCCCCTGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: SGCGQRASLTQPLERLHPGSVQV*RSPWRG
Trigger: GCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCC...GGGGTGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp AGGCTGCACCCCATGGCAGGCGGCCTAGACTGTAAAGGGGCAGGGCCTGGGCTGCCGCCGGGAAGGCCCTaGCTTTTCCCCTTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: RLHPMAGGLDCKGAGPGLPPGRP*LFPFQL
Trigger: CAGCTGGAAGGGGAAAAGTCAGGGCCTTCCCGGCGG...CAGCCCAGGCCCTGCCCCTTTACAGTCTAGGCCGCCTGCCATGGGGTGCAGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR CCA 90 bp GGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGAAAGGCCCGGGGCAACCTTaGGGCCAAGAGCGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: GAELLLRTPPAVCWTLGKGPGQP*GQERPQ
Trigger: CTGGGGCCGCTCTTGGCCCCAAGGTTGCCCCGGGCC...TTTCCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR CCA 90 bp CTCAGGGACACAGCTCCCGGAGGCGTGGAGACAGGTCTCTGTCCCAGAGGACTTGGCCCGGGGCAACCTTaGGGCCAAGAGCGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: LRDTAPGGVETGLCPRGLGPGQP*GQERPQ
Trigger: CTGGGGCCGCTCTTGGCCCCAAGGTTGCCCCGGGCC...AAGTCCTCTGGGACAGAGACCTGTCTCCACGCCTCCGGGAGCTGTGTCCCTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR TCA 90 bp AAGCCAAGGTGTGGAGGGACCCCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGGGGGAATCATCGCTCTaGACCCCGCGGCTCCCACTC +
Preference number: 4 (lower is better)
Translates to: KPRCGGTPGFRESAGSAGGESSL*TPRLPL
Trigger: GAGTGGGAGCCGCGGGGTTCAGAGCGATGATTCCCC...CCCAGCCGAACCAGCACTCTCCCGGAAGCCTGGGGTCCCTCCACACCTTGGCTT
67% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000335146.11
ENST00000589210.6
CDS-3UTR TCA 90 bp TCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCACCCCGCTGGGGGCGGGCCATaGCAGGGCCTCTGGATTAAG +
Preference number: 4 (lower is better)
Translates to: SGCGQRASLTQPLERLHPAGGGP*QGLWIK
Trigger: CTTAATCCAGAGGCCCTGTCATGGCCCGCCCCCAGC...GGGGTGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp GGTGGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGACGCTCTCGGGCAGGTaGTCCAGGGTCACGTCCTCC +
Preference number: 4 (lower is better)
Translates to: GGAELLLRTPPAVCWTLGTLSGR*SRVTSS
Trigger: GGAGGACGTGACCCTGGAGCACCTGCCCGAGAGCGT...CCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp GGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGAAAAGCCCCTGGAGAGGCTaGACCCCATGGCAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: GAELLLRTPPAVCWTLGKSPWRG*TPWQAA
Trigger: GGCCGCCTGCCATGGGGTGCAGCCTCTCCAGGGGCT...TTTCCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp TCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCACCCCCTTGGGAGGCCAGCATaGCGCCTGCCGTCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: SGCGQRASLTQPLERLHPLGRPA*RLPSPG
Trigger: TCCAGGAGACGGCAGGCGCCATGCTGGCCTCCCAAG...GGGGTGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AAGCCAAGGTGTGGAGGGACCCCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGGCAACCACGACTGCCTaGCCCTGGGCCAAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: KPRCGGTPGFRESAGSAGATTTA*PWAKRH
Trigger: GTGCCTCTTGGCCCAGGGCCAGGCAGTCGTGGTTGC...CCCAGCCGAACCAGCACTCTCCCGGAAGCCTGGGGTCCCTCCACACCTTGGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp TCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCACCCCTCCCCGGTCACCCACTaGTGCTCAGCTCGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: SGCGQRASLTQPLERLHPSPVTH*CSARWA
Trigger: TGCCCAGCGAGCTGAGCACCAGTGGGTGACCGGGGA...GGGGTGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR TCA 90 bp AGGCTGCACCCCATGGCAGGCGGCCTAGACTGTAAAGGGGCAGGGCCTGGGCTGCTCTGGCTGCTTCTCTaGGCCCTGCCACATCTCTGG +
Preference number: 4 (lower is better)
Translates to: RLHPMAGGLDCKGAGPGLLWLLL*ALPHLW
Trigger: CCAGAGATGTGGCAGGGCTCAGAGAAGCAGCCAGAG...CAGCCCAGGCCCTGCCCCTTTACAGTCTAGGCCGCCTGCCATGGGGTGCAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp CTCAGGGACACAGCTCCCGGAGGCGTGGAGACAGGTCTCTGTCCCAGAGGACTTGGCAGCGTGCAAGTCTaGCGCAGCCCCTGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: LRDTAPGGVETGLCPRGLGSVQV*RSPWRG
Trigger: GCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCC...AAGTCCTCTGGGACAGAGACCTGTCTCCACGCCTCCGGGAGCTGTGTCCCTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp TCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCACCCCGCCCCTCCGGGCCATTaGGCGCATAGGCTACAAGGT +
Preference number: 4 (lower is better)
Translates to: SGCGQRASLTQPLERLHPAPPGH*AHRLQG
Trigger: ACCTTGTAGCCTATGCGCTCAATGGCCCGGAGGGGC...GGGGTGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR GCA 90 bp AGGCTGCACCCCATGGCAGGCGGCCTAGACTGTAAAGGGGCAGGGCCTGGGCTGAGGCTTCCGGGAGAGTaGTGGTTCGGCTGGGAACAC +
Preference number: 4 (lower is better)
Translates to: RLHPMAGGLDCKGAGPGLRLPGE*WFGWEH
Trigger: GTGTTCCCAGCCGAACCAGCACTCTCCCGGAAGCCT...CAGCCCAGGCCCTGCCCCTTTACAGTCTAGGCCGCCTGCCATGGGGTGCAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp AGGCTGCACCCCATGGCAGGCGGCCTAGACTGTAAAGGGGCAGGGCCTGGGCTGCCTCCTGCAACCCACTaGTCAGTAAGCCCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: RLHPMAGGLDCKGAGPGLPPATH*SVSPAP
Trigger: GGGAGCAGGGCTTACTGAGCAGTGGGTTGCAGGAGG...CAGCCCAGGCCCTGCCCCTTTACAGTCTAGGCCGCCTGCCATGGGGTGCAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR GCA 90 bp GGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGAAAAGGCCGACAGAGGGCTaGTGGAGGCGGGTGGGAGTG +
Preference number: 4 (lower is better)
Translates to: GAELLLRTPPAVCWTLGKRPTEG*WRRVGV
Trigger: CACTCCCACCCGCCTCCAGCAGCCCTCTGTCGGCCT...TTTCCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR CCA 90 bp AAGCCAAGGTGTGGAGGGACCCCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGATGTCGGCCAGCAGCTaGTACTCGCTCTGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: KPRCGGTPGFRESAGSAGMSASS*YSLCAS
Trigger: GCTGGCGCAGAGCGAGTACCAGCTGCTGGCCGACAT...CCCAGCCGAACCAGCACTCTCCCGGAAGCCTGGGGTCCCTCCACACCTTGGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AAGCCAAGGTGTGGAGGGACCCCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGCTTCCGGGAGAGTGCTaGTTCGGCTGGGAACACGGG +
Preference number: 4 (lower is better)
Translates to: KPRCGGTPGFRESAGSAGLPGEC*FGWEHG
Trigger: CCCGTGTTCCCAGCCGAACCAGCACTCTCCCGGAAG...CCCAGCCGAACCAGCACTCTCCCGGAAGCCTGGGGTCCCTCCACACCTTGGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AGGCTGCACCCCATGGCAGGCGGCCTAGACTGTAAAGGGGCAGGGCCTGGGCTGCAGAGACACAGGGACTaGCCCCTGAGCATCTCCCTG +
Preference number: 4 (lower is better)
Translates to: RLHPMAGGLDCKGAGPGLQRHRD*PLSISL
Trigger: CAGGGAGATGCTCAGGGGCCAGTCCCTGTGTCTCTG...CAGCCCAGGCCCTGCCCCTTTACAGTCTAGGCCGCCTGCCATGGGGTGCAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR TCA 90 bp AGGCTGCACCCCATGGCAGGCGGCCTAGACTGTAAAGGGGCAGGGCCTGGGCTGAGCGGGAGATGCGAATaGCATCCTGGAGCACGCTCT +
Preference number: 4 (lower is better)
Translates to: RLHPMAGGLDCKGAGPGLSGRCE*HPGARS
Trigger: AGAGCGTGCTCCAGGATGTCATTCGCATCTCCCGCT...CAGCCCAGGCCCTGCCCCTTTACAGTCTAGGCCGCCTGCCATGGGGTGCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp AAGCCAAGGTGTGGAGGGACCCCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGCAGGCTTGGTCTGCTTaGGGTGTCGCAGGATGGGGA +
Preference number: 4 (lower is better)
Translates to: KPRCGGTPGFRESAGSAGQAWSA*GVAGWG
Trigger: TCCCCATCCTGCGACACCTCAAGCAGACCAAGCCTG...CCCAGCCGAACCAGCACTCTCCCGGAAGCCTGGGGTCCCTCCACACCTTGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp AAGCCAAGGTGTGGAGGGACCCCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGGGATGGCATTGCTGGTaGGCTCGTGTACGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: KPRCGGTPGFRESAGSAGGWHCW*ARVRCR
Trigger: ACGGCACCGTACACGAGCTCACCAGCAATGCCATCC...CCCAGCCGAACCAGCACTCTCCCGGAAGCCTGGGGTCCCTCCACACCTTGGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp AGGCTGCACCCCATGGCAGGCGGCCTAGACTGTAAAGGGGCAGGGCCTGGGCTGTGGATTAAGCCACCCTaGGCTCTCCCTCCGCTAGCA +
Preference number: 4 (lower is better)
Translates to: RLHPMAGGLDCKGAGPGLWIKPP*ALPPLA
Trigger: TGCTAGCGGAGGGAGAGCTCAGGGTGGCTTAATCCA...CAGCCCAGGCCCTGCCCCTTTACAGTCTAGGCCGCCTGCCATGGGGTGCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp GGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGAAAGCTGGGGGCGGGCCATaGCAGGGCCTCTGGATTAAG +
Preference number: 4 (lower is better)
Translates to: GAELLLRTPPAVCWTLGKAGGGP*QGLWIK
Trigger: CTTAATCCAGAGGCCCTGTCATGGCCCGCCCCCAGC...TTTCCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp CCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGAACACGGGCTGTGGGGAAAAAACGCTCTCGGGCAGGTaGTCCAGGGTCACGTCCTCC +
Preference number: 4 (lower is better)
Translates to: PGFRESAGSAGNTGCGEKTLSGR*SRVTSS
Trigger: GGAGGACGTGACCCTGGAGCACCTGCCCGAGAGCGT...TTTTTCCCCACAGCCCGTGTTCCCAGCCGAACCAGCACTCTCCCGGAAGCCTGG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp GGGACACAGCTCCCGGAGGCGTGGAGACAGGTCTCTGTCCCAGAGGACTTCAAGACGCTCTCGGGCAGGTaGTCCAGGGTCACGTCCTCC +
Preference number: 4 (lower is better)
Translates to: GTQLPEAWRQVSVPEDFKTLSGR*SRVTSS
Trigger: GGAGGACGTGACCCTGGAGCACCTGCCCGAGAGCGT...CTTGAAGTCCTCTGGGACAGAGACCTGTCTCCACGCCTCCGGGAGCTGTGTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp AGGCTGCACCCCATGGCAGGCGGCCTAGACTGTAAAGGGGCAGGGCCTGGGCTGAGCTGGTACTCGCTCTaGGCCAGCTTGACGAAGGCA +
Preference number: 4 (lower is better)
Translates to: RLHPMAGGLDCKGAGPGLSWYSL*ASLTKA
Trigger: TGCCTTCGTCAAGCTGGCGCAGAGCGAGTACCAGCT...CAGCCCAGGCCCTGCCCCTTTACAGTCTAGGCCGCCTGCCATGGGGTGCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp AGGCTGCACCCCATGGCAGGCGGCCTAGACTGTAAAGGGGCAGGGCCTGGGCTGCGCTCCTTGATAATCTaGCGCTCCTTGTCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: RLHPMAGGLDCKGAGPGLRSLII*RSLSRS
Trigger: GCTCCGGGACAAGGAGCGGCAGATTATCAAGGAGCG...CAGCCCAGGCCCTGCCCCTTTACAGTCTAGGCCGCCTGCCATGGGGTGCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp GGTGGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGTCCAGGAGCTCTGGCTaGTTCTCTGAGCCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: GGAELLLRTPPAVCWTLGSRSSG*FSEPCH
Trigger: GTGGCAGGGCTCAGAGAAGCAGCCAGAGCTCCTGGA...CCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp AAGCCAAGGTGTGGAGGGACCCCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGGGGGTCAGTCCCGACTaGCTTTCCTCCAGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: KPRCGGTPGFRESAGSAGGVSPD*LSSRSS
Trigger: AGAGCTCCTGGAGGAAAGGCAGTCGGGACTGACCCC...CCCAGCCGAACCAGCACTCTCCCGGAAGCCTGGGGTCCCTCCACACCTTGGCTT
64% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp TCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCACCCCCCTCCGAACGCCTCCTaGAGTGTGCTGGACTCTAGG +
Preference number: 4 (lower is better)
Translates to: SGCGQRASLTQPLERLHPPPNAS*SVLDSR
Trigger: CCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGG...GGGGTGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp AAGCCAAGGTGTGGAGGGACCCCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGCGCTCTCTTGGTGCCTaGAGAGGCACTGCTGTTGGC +
Preference number: 4 (lower is better)
Translates to: KPRCGGTPGFRESAGSAGRSLGA*RGTAVG
Trigger: GCCAACAGCAGTGCCTCTGCAGGCACCAAGAGAGCG...CCCAGCCGAACCAGCACTCTCCCGGAAGCCTGGGGTCCCTCCACACCTTGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR CCA 90 bp AAGCCAAGGTGTGGAGGGACCCCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGGCGCCTGCCGTCTCCTaGAAGTCCAAAAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KPRCGGTPGFRESAGSAGAPAVS*KSKSCC
Trigger: GCAGCAGCTTTTGGACTTCCAGGAGACGGCAGGCGC...CCCAGCCGAACCAGCACTCTCCCGGAAGCCTGGGGTCCCTCCACACCTTGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp GGAATCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCACTTGGGAGGCCAGCATaGCGCCTGCCGTCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: GIWMWAACKSDAAPGEAALGRPA*RLPSPG
Trigger: TCCAGGAGACGGCAGGCGCCATGCTGGCCTCCCAAG...TGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGATTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AAAAGCCAAGGTGTGGAGGGACCCCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGCTTGGGAGGCCAGCATaGCGCCTGCCGTCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: KSQGVEGPQASGRVLVRLLGRPA*RLPSPG
Trigger: TCCAGGAGACGGCAGGCGCCATGCTGGCCTCCCAAG...CAGCCGAACCAGCACTCTCCCGGAAGCCTGGGGTCCCTCCACACCTTGGCTTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp GGTGGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGTGGTGGCCGAAGAGCTaGTCTCTTGGGAGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: GGAELLLRTPPAVCWTLGWWPKS*SLGRPA
Trigger: TGCTGGCCTCCCAAGAGACCAGCTCTTCGGCCACCA...CCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
CDS-3UTR CCA 90 bp GGGACACAGCTCCCGGAGGCGTGGAGACAGGTCTCTGTCCCAGAGGACTTCAAGGCAACCACGACTGCCTaGCCCTGGGCCAAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: GTQLPEAWRQVSVPEDFKATTTA*PWAKRH
Trigger: GTGCCTCTTGGCCCAGGGCCAGGCAGTCGTGGTTGC...CTTGAAGTCCTCTGGGACAGAGACCTGTCTCCACGCCTCCGGGAGCTGTGTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp CTCAGGGACACAGCTCCCGGAGGCGTGGAGACAGGTCTCTGTCCCAGAGGACTTGCAACCACGACTGCCTaGCCCTGGGCCAAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: LRDTAPGGVETGLCPRGLATTTA*PWAKRH
Trigger: GTGCCTCTTGGCCCAGGGCCAGGCAGTCGTGGTTGC...AAGTCCTCTGGGACAGAGACCTGTCTCCACGCCTCCGGGAGCTGTGTCCCTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp GGTGGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGGGGTCACAGAGAAGCTaGCCTGAGACTGCTGACCGC +
Preference number: 4 (lower is better)
Translates to: GGAELLLRTPPAVCWTLGGSQRS*PETADR
Trigger: GCGGTCAGCAGTCTCAGGCCAGCTTCTCTGTGACCC...CCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCCACC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AAGCCAAGGTGTGGAGGGACCCCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGACGGAGGTCCAGGTGTaGGTAGAGGCCCCTTGCATC +
Preference number: 4 (lower is better)
Translates to: KPRCGGTPGFRESAGSAGTEVQV*VEAPCI
Trigger: GATGCAAGGGGCCTCTACCCACACCTGGACCTCCGT...CCCAGCCGAACCAGCACTCTCCCGGAAGCCTGGGGTCCCTCCACACCTTGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR CCA 90 bp CCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGAACACGGGCTGTGGGGAAAAATCCCCGGTCACCCACTaGTGCTCAGCTCGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: PGFRESAGSAGNTGCGEKSPVTH*CSARWA
Trigger: TGCCCAGCGAGCTGAGCACCAGTGGGTGACCGGGGA...TTTTTCCCCACAGCCCGTGTTCCCAGCCGAACCAGCACTCTCCCGGAAGCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR TCA 90 bp AAGCCAAGGTGTGGAGGGACCCCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGCCCCGTAGGTCTCCTTaGCAATGGTCTTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: KPRCGGTPGFRESAGSAGPRRSP*QWSSGP
Trigger: AGGCCCAGAAGACCATTGTCAAGGAGACCTACGGGG...CCCAGCCGAACCAGCACTCTCCCGGAAGCCTGGGGTCCCTCCACACCTTGGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp GGTGGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGTCTCCGGGTTCTTGGTaGAGGGCACGCTGCCAAACT +
Preference number: 4 (lower is better)
Translates to: GGAELLLRTPPAVCWTLGSPGSW*RARCQT
Trigger: AGTTTGGCAGCGTGCCCTTCACCAAGAACCCGGAGA...CCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp CCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGAACACGGGCTGTGGGGAAAAAAGGGAAAATGGCCAGTaGGCCTGCCTCCCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: PGFRESAGSAGNTGCGEKRENGQ*ACLPQP
Trigger: TGGCTGGGGGAGGCAGGCTCACTGGCCATTTTCCCT...TTTTTCCCCACAGCCCGTGTTCCCAGCCGAACCAGCACTCTCCCGGAAGCCTGG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp AAAAGCCAAGGTGTGGAGGGACCCCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGCCCCTCCGGGCCATTaGGCGCATAGGCTACAAGGT +
Preference number: 4 (lower is better)
Translates to: KSQGVEGPQASGRVLVRLAPPGH*AHRLQG
Trigger: ACCTTGTAGCCTATGCGCTCAATGGCCCGGAGGGGC...CAGCCGAACCAGCACTCTCCCGGAAGCCTGGGGTCCCTCCACACCTTGGCTTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR GCA 90 bp GGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGAAACCGCCGTCGAGCGGATaGCTCCTGTGGGGGAATCAT +
Preference number: 4 (lower is better)
Translates to: GAELLLRTPPAVCWTLGKPPSSG*LLWGNH
Trigger: ATGATTCCCCCACAGGAGGCATCCGCTCGACGGCGG...TTTCCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp GGCCTGAGACTGCTGACCGCATCTTCTTCCTCGTGTATGTGGTTGGGGTGCTGTAGCCCCTGGAGAGGCTaGACCCCATGGCAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: GLRLLTASSSSCMWLGCCSPWRG*TPWQAA
Trigger: GGCCGCCTGCCATGGGGTGCAGCCTCTCCAGGGGCT...ACAGCACCCCAACCACATACACGAGGAAGAAGATGCGGTCAGCAGTCTCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp TTTTCCCCATTGTCCCTGTCTCCCAGCCCACAGGCAGGCAGCCTAATTGCTCCTAGCCCCTGGAGAGGCTaGACCCCATGGCAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: FSPLSLSPSPQAGSLIAPSPWRG*TPWQAA
Trigger: GGCCGCCTGCCATGGGGTGCAGCCTCTCCAGGGGCT...AGGAGCAATTAGGCTGCCTGCCTGTGGGCTGGGAGACAGGGACAATGGGGAAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp GGTGGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGCTCCCTTACCCAGTCTaGCCTGTTTCTCCCCGGTCA +
Preference number: 4 (lower is better)
Translates to: GGAELLLRTPPAVCWTLGLPYPV*PVSPRS
Trigger: TGACCGGGGAGAAACAGGGCAGACTGGGTAAGGGAG...CCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR GCA 90 bp AAAAGCCAAGGTGTGGAGGGACCCCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGCCCTGGGCTCCAGTCTaGTACCCCCAGACTTGGCAG +
Preference number: 4 (lower is better)
Translates to: KSQGVEGPQASGRVLVRLPWAPV*YPQTWQ
Trigger: CTGCCAAGTCTGGGGGTAGCAGACTGGAGCCCAGGG...CAGCCGAACCAGCACTCTCCCGGAAGCCTGGGGTCCCTCCACACCTTGGCTTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR CCA 90 bp TCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCACCCCAGGGTCACGTCCTCCTaGGCCTCCAGATCATCGTCA +
Preference number: 4 (lower is better)
Translates to: SGCGQRASLTQPLERLHPRVTSS*ASRSSS
Trigger: TGACGATGATCTGGAGGCCCAGGAGGACGTGACCCT...GGGGTGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp TCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCACCCCATGCGAATGACATCCTaGAGCACGCTCTCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SGCGQRASLTQPLERLHPMRMTS*STLSGR
Trigger: CCTGCCCGAGAGCGTGCTCCAGGATGTCATTCGCAT...GGGGTGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp GGTGGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGCCCTGGCCGCTTGACTaGCTTCTTGGTAGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: GGAELLLRTPPAVCWTLGPWPLD*LLGRCV
Trigger: GACACACCTACCAAGAAGCCAGTCAAGCGGCCAGGG...CCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp CTCAGGGACACAGCTCCCGGAGGCGTGGAGACAGGTCTCTGTCCCAGAGGACTTATGTCGGCCAGCAGCTaGTACTCGCTCTGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: LRDTAPGGVETGLCPRGLMSASS*YSLCAS
Trigger: GCTGGCGCAGAGCGAGTACCAGCTGCTGGCCGACAT...AAGTCCTCTGGGACAGAGACCTGTCTCCACGCCTCCGGGAGCTGTGTCCCTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp TCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCACCCCAGTCGTGTCGCACAATaGCCTTCCGGGCAGCAGACA +
Preference number: 4 (lower is better)
Translates to: SGCGQRASLTQPLERLHPSRVAQ*PSGQQT
Trigger: TGTCTGCTGCCCGGAAGGCCATTGTGCGACACGACT...GGGGTGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AAGCCAAGGTGTGGAGGGACCCCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGAGTCCTCCAGCGCTTTaGCACCGATGGTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: KPRCGGTPGFRESAGSAGSPPAL*HRWSPW
Trigger: CCATGGAGACCATCGGTGCCAAAGCGCTGGAGGACT...CCCAGCCGAACCAGCACTCTCCCGGAAGCCTGGGGTCCCTCCACACCTTGGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp GCTGAACTCAGAGCTGTAGCTGGTGGCCGAAGAGCTGGTCTCTTGGGAGGCCAGCTTGGGAGGCCAGCATaGCGCCTGCCGTCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: AELRAVAGGRRAGLLGGQLGRPA*RLPSPG
Trigger: TCCAGGAGACGGCAGGCGCCATGCTGGCCTCCCAAG...CTGGCCTCCCAAGAGACCAGCTCTTCGGCCACCAGCTACAGCTCTGAGTTCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592559.1
CDS-3UTR CCA 90 bp AAGCCAAGGTGTGGAGGGACCCCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGGATGGCGCTCAGAGCTaGGTCCTCGTACACCTTGGA +
Preference number: 4 (lower is better)
Translates to: KPRCGGTPGFRESAGSAGDGAQS*VLVHLG
Trigger: TCCAAGGTGTACGAGGACCCAGCTCTGAGCGCCATC...CCCAGCCGAACCAGCACTCTCCCGGAAGCCTGGGGTCCCTCCACACCTTGGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AAGCCAAGGTGTGGAGGGACCCCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGATGGTCTTCTGGGCCTaGCGAATCCTGTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: KPRCGGTPGFRESAGSAGMVFWA*RILSLC
Trigger: GCAGAGGGACAGGATTCGCCAGGCCCAGAAGACCAT...CCCAGCCGAACCAGCACTCTCCCGGAAGCCTGGGGTCCCTCCACACCTTGGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AGGCTGCACCCCATGGCAGGCGGCCTAGACTGTAAAGGGGCAGGGCCTGGGCTGAATGACACGCCAGTCTaGTGGAACCAGGCAGGGCTA +
Preference number: 4 (lower is better)
Translates to: RLHPMAGGLDCKGAGPGLNDTPV*WNQAGL
Trigger: TAGCCCTGCCTGGTTCCACCAGACTGGCGTGTCATT...CAGCCCAGGCCCTGCCCCTTTACAGTCTAGGCCGCCTGCCATGGGGTGCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp GGTGGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGTGGGAACACGGGCTGTaGGGAAAAAGCAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: GGAELLLRTPPAVCWTLGWEHGL*GKSRSQ
Trigger: CTGGCTCCTGCTTTTTCCCCACAGCCCGTGTTCCCA...CCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp CCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGAACACGGGCTGTGGGGAAAAATTGCTTTCCCATGGCTaGGGGCGGGCCATGACAGGG +
Preference number: 4 (lower is better)
Translates to: PGFRESAGSAGNTGCGEKLLSHG*GRAMTG
Trigger: CCCTGTCATGGCCCGCCCCCAGCCATGGGAAAGCAA...TTTTTCCCCACAGCCCGTGTTCCCAGCCGAACCAGCACTCTCCCGGAAGCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp GGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGAAATTGCTTTCCCATGGCTaGGGGCGGGCCATGACAGGG +
Preference number: 4 (lower is better)
Translates to: GAELLLRTPPAVCWTLGKLLSHG*GRAMTG
Trigger: CCCTGTCATGGCCCGCCCCCAGCCATGGGAAAGCAA...TTTCCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AAGCCAAGGTGTGGAGGGACCCCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGTGGTGGCCGAAGAGCTaGTCTCTCGGGGGTCTAAAG +
Preference number: 4 (lower is better)
Translates to: KPRCGGTPGFRESAGSAGWWPKS*SLGGLK
Trigger: CTTTAGACCCCCGAGAGACCAGCTCTTCGGCCACCA...CCCAGCCGAACCAGCACTCTCCCGGAAGCCTGGGGTCCCTCCACACCTTGGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607838.5
CDS-3UTR TCA 90 bp AAAAGCCAAGGTGTGGAGGGACCCCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGCTCCTTCAGTCCTTTaGTGGAGCGGTCCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: KSQGVEGPQASGRVLVRLAPSVL*WSGPAG
Trigger: GCCAGCTGGACCGCTCCATCAAAGGACTGAAGGAGC...CAGCCGAACCAGCACTCTCCCGGAAGCCTGGGGTCCCTCCACACCTTGGCTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp CCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGAACACGGGCTGTGGGGAAAAAGGATGGGGAAGACGGTaGGCACCGTGGAGAAGTCGT +
Preference number: 4 (lower is better)
Translates to: PGFRESAGSAGNTGCGEKGWGRR*APWRSR
Trigger: ACGACTTCTCCACGGTGCTCACCGTCTTCCCCATCC...TTTTTCCCCACAGCCCGTGTTCCCAGCCGAACCAGCACTCTCCCGGAAGCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp GGTGAGCACCGTGGAGAAGTCGTGTCGCACAATGGCCTTCCGGGCAGCAGACACGGATGGGGAAGACGGTaGGCACCGTGGAGAAGTCGT +
Preference number: 4 (lower is better)
Translates to: GEHRGEVVSHNGLPGSRHGWGRR*APWRSR
Trigger: ACGACTTCTCCACGGTGCTCACCGTCTTCCCCATCC...GTGTCTGCTGCCCGGAAGGCCATTGTGCGACACGACTTCTCCACGGTGCTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592559.1
CDS-3UTR TCA 90 bp GGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGAAAGGATGGGGAAGACGGTaGGCACCGTGGAGAAGTCGT +
Preference number: 4 (lower is better)
Translates to: GAELLLRTPPAVCWTLGKGWGRR*APWRSR
Trigger: ACGACTTCTCCACGGTGCTCACCGTCTTCCCCATCC...TTTCCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp GGAATCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCACAGGCTTGGTCTGCTTaGGGTGTCGCAGGATGGGGA +
Preference number: 4 (lower is better)
Translates to: GIWMWAACKSDAAPGEAAQAWSA*GVAGWG
Trigger: TCCCCATCCTGCGACACCTCAAGCAGACCAAGCCTG...TGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGATTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp CCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGAACACGGGCTGTGGGGAAAAACAGGCTTGGTCTGCTTaGGGTGTCGCAGGATGGGGA +
Preference number: 4 (lower is better)
Translates to: PGFRESAGSAGNTGCGEKQAWSA*GVAGWG
Trigger: TCCCCATCCTGCGACACCTCAAGCAGACCAAGCCTG...TTTTTCCCCACAGCCCGTGTTCCCAGCCGAACCAGCACTCTCCCGGAAGCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp GGGACACAGCTCCCGGAGGCGTGGAGACAGGTCTCTGTCCCAGAGGACTTCAAGCTCTGGCTGCTTCTCTaGGCCCTGCCACATCTCTGG +
Preference number: 4 (lower is better)
Translates to: GTQLPEAWRQVSVPEDFKLWLLL*ALPHLW
Trigger: CCAGAGATGTGGCAGGGCTCAGAGAAGCAGCCAGAG...CTTGAAGTCCTCTGGGACAGAGACCTGTCTCCACGCCTCCGGGAGCTGTGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp CCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGAACACGGGCTGTGGGGAAAAACTCTGGCTGCTTCTCTaGGCCCTGCCACATCTCTGG +
Preference number: 4 (lower is better)
Translates to: PGFRESAGSAGNTGCGEKLWLLL*ALPHLW
Trigger: CCAGAGATGTGGCAGGGCTCAGAGAAGCAGCCAGAG...TTTTTCCCCACAGCCCGTGTTCCCAGCCGAACCAGCACTCTCCCGGAAGCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp GGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGAAAGCCGCGTCATCAGGCTaGGAAATTCGGACTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GAELLLRTPPAVCWTLGKAASSG*EIRTPG
Trigger: CCCTGGAGTCCGAATTTCGCAGCCTGATGACGCGGC...TTTCCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp AAAAGCCAAGGTGTGGAGGGACCCCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGCCGCGTCATCAGGCTaGGAAATTCGGACTCCAGGG +
Preference number: 4 (lower is better)
Translates to: KSQGVEGPQASGRVLVRLAASSG*EIRTPG
Trigger: CCCTGGAGTCCGAATTTCGCAGCCTGATGACGCGGC...CAGCCGAACCAGCACTCTCCCGGAAGCCTGGGGTCCCTCCACACCTTGGCTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp AGGCTGCACCCCATGGCAGGCGGCCTAGACTGTAAAGGGGCAGGGCCTGGGCTGAACTCAGGCTTGGTCTaGTTGAGGTGTCGCAGGATG +
Preference number: 4 (lower is better)
Translates to: RLHPMAGGLDCKGAGPGLNSGLV*LRCRRM
Trigger: CATCCTGCGACACCTCAAGCAGACCAAGCCTGAGTT...CAGCCCAGGCCCTGCCCCTTTACAGTCTAGGCCGCCTGCCATGGGGTGCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp GGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGAAATTGTGCTGGCAGCCGTaGCCTGGAGCACCTGGTCAA +
Preference number: 4 (lower is better)
Translates to: GAELLLRTPPAVCWTLGKLCWQP*PGAPGQ
Trigger: TTGACCAGGTGCTCCAGGGCACGGCTGCCAGCACAA...TTTCCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp GGTGAGCACCGTGGAGAAGTCGTGTCGCACAATGGCCTTCCGGGCAGCAGACACTTGTGCTGGCAGCCGTaGCCTGGAGCACCTGGTCAA +
Preference number: 4 (lower is better)
Translates to: GEHRGEVVSHNGLPGSRHLCWQP*PGAPGQ
Trigger: TTGACCAGGTGCTCCAGGGCACGGCTGCCAGCACAA...GTGTCTGCTGCCCGGAAGGCCATTGTGCGACACGACTTCTCCACGGTGCTCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592559.1
CDS-3UTR GCA 90 bp GGGACACAGCTCCCGGAGGCGTGGAGACAGGTCTCTGTCCCAGAGGACTTCAAGCCTCCGAACGCCTCCTaGAGTGTGCTGGACTCTAGG +
Preference number: 4 (lower is better)
Translates to: GTQLPEAWRQVSVPEDFKPPNAS*SVLDSR
Trigger: CCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGG...CTTGAAGTCCTCTGGGACAGAGACCTGTCTCCACGCCTCCGGGAGCTGTGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp CCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGAACACGGGCTGTGGGGAAAAATTCTGCAACCACGACTaGCTGGCCCTGGGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: PGFRESAGSAGNTGCGEKFCNHD*LALGQE
Trigger: CTCTTGGCCCAGGGCCAGGCAGTCGTGGTTGCAGAA...TTTTTCCCCACAGCCCGTGTTCCCAGCCGAACCAGCACTCTCCCGGAAGCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp AAGCCAAGGTGTGGAGGGACCCCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGCCTAATTGCTCCTTCTaGAACCACGACTGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: KPRCGGTPGFRESAGSAGPNCSF*NHDCLA
Trigger: GGCCAGGCAGTCGTGGTTGCAGAAGGAGCAATTAGG...CCCAGCCGAACCAGCACTCTCCCGGAAGCCTGGGGTCCCTCCACACCTTGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp CTCAGGGACACAGCTCCCGGAGGCGTGGAGACAGGTCTCTGTCCCAGAGGACTTTGGATGTGGGCAGCGTaGAAGTCTGACGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: LRDTAPGGVETGLCPRGLWMWAA*KSDAAP
Trigger: AGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCA...AAGTCCTCTGGGACAGAGACCTGTCTCCACGCCTCCGGGAGCTGTGTCCCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp CCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGAACACGGGCTGTGGGGAAAAATGGATGTGGGCAGCGTaGAAGTCTGACGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: PGFRESAGSAGNTGCGEKWMWAA*KSDAAP
Trigger: AGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCA...TTTTTCCCCACAGCCCGTGTTCCCAGCCGAACCAGCACTCTCCCGGAAGCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp CCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGAACACGGGCTGTGGGGAAAAATGGGTAGAGGCCCCTTaGATCCACCCTGCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: PGFRESAGSAGNTGCGEKWVEAP*IHPAGS
Trigger: AGAGCCAGCAGGGTGGATGCAAGGGGCCTCTACCCA...TTTTTCCCCACAGCCCGTGTTCCCAGCCGAACCAGCACTCTCCCGGAAGCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR GCA 90 bp CTCAGGGACACAGCTCCCGGAGGCGTGGAGACAGGTCTCTGTCCCAGAGGACTTTGCCTGCAGAGGCACTaGTGTTGGCTGACGTGTGCG +
Preference number: 4 (lower is better)
Translates to: LRDTAPGGVETGLCPRGLCLQRH*CWLTCA
Trigger: CGCACACGTCAGCCAACAGCAGTGCCTCTGCAGGCA...AAGTCCTCTGGGACAGAGACCTGTCTCCACGCCTCCGGGAGCTGTGTCCCTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR GCA 90 bp CCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGAACACGGGCTGTGGGGAAAAACGCTCTCTTGGTGCCTaGAGAGGCACTGCTGTTGGC +
Preference number: 4 (lower is better)
Translates to: PGFRESAGSAGNTGCGEKRSLGA*RGTAVG
Trigger: GCCAACAGCAGTGCCTCTGCAGGCACCAAGAGAGCG...TTTTTCCCCACAGCCCGTGTTCCCAGCCGAACCAGCACTCTCCCGGAAGCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR CCA 90 bp TCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCACCCCAGCGGATGCCTCCTGTaGGGGAATCATCGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: SGCGQRASLTQPLERLHPSGCLL*GNHRSE
Trigger: TTCAGAGCGATGATTCCCCCACAGGAGGCATCCGCT...GGGGTGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000335146.11
ENST00000589210.6
CDS-3UTR CCA 90 bp CCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGAACACGGGCTGTGGGGAAAAACTGGCAGCCGTGCCCTaGAGCACCTGGTCAAACTCA +
Preference number: 4 (lower is better)
Translates to: PGFRESAGSAGNTGCGEKLAAVP*STWSNS
Trigger: TGAGTTTGACCAGGTGCTCCAGGGCACGGCTGCCAG...TTTTTCCCCACAGCCCGTGTTCCCAGCCGAACCAGCACTCTCCCGGAAGCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp CTCAGGGACACAGCTCCCGGAGGCGTGGAGACAGGTCTCTGTCCCAGAGGACTTCTGGCAGCCGTGCCCTaGAGCACCTGGTCAAACTCA +
Preference number: 4 (lower is better)
Translates to: LRDTAPGGVETGLCPRGLLAAVP*STWSNS
Trigger: TGAGTTTGACCAGGTGCTCCAGGGCACGGCTGCCAG...AAGTCCTCTGGGACAGAGACCTGTCTCCACGCCTCCGGGAGCTGTGTCCCTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp GGGAAGACGGTGAGCACCGTGGAGAAGTCGTGTCGCACAATGGCCTTCCGGGCACTGGCAGCCGTGCCCTaGAGCACCTGGTCAAACTCA +
Preference number: 4 (lower is better)
Translates to: GKTVSTVEKSCRTMAFRALAAVP*STWSNS
Trigger: TGAGTTTGACCAGGTGCTCCAGGGCACGGCTGCCAG...TGCCCGGAAGGCCATTGTGCGACACGACTTCTCCACGGTGCTCACCGTCTTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592559.1
CDS-3UTR CCA 90 bp CCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGAACACGGGCTGTGGGGAAAAAGAAGAGCTGGTCTCTTaGGAGGCCAGCATGGCGCCT +
Preference number: 4 (lower is better)
Translates to: PGFRESAGSAGNTGCGEKEELVS*EASMAP
Trigger: AGGCGCCATGCTGGCCTCCCAAGAGACCAGCTCTTC...TTTTTCCCCACAGCCCGTGTTCCCAGCCGAACCAGCACTCTCCCGGAAGCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
CDS-3UTR CCA 90 bp CTCAGGGACACAGCTCCCGGAGGCGTGGAGACAGGTCTCTGTCCCAGAGGACTTGAAGAGCTGGTCTCTTaGGAGGCCAGCATGGCGCCT +
Preference number: 4 (lower is better)
Translates to: LRDTAPGGVETGLCPRGLEELVS*EASMAP
Trigger: AGGCGCCATGCTGGCCTCCCAAGAGACCAGCTCTTC...AAGTCCTCTGGGACAGAGACCTGTCTCCACGCCTCCGGGAGCTGTGTCCCTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
CDS-3UTR CCA 90 bp GGAATCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCAGAAGAGCTGGTCTCTTaGGAGGCCAGCATGGCGCCT +
Preference number: 4 (lower is better)
Translates to: GIWMWAACKSDAAPGEAAEELVS*EASMAP
Trigger: AGGCGCCATGCTGGCCTCCCAAGAGACCAGCTCTTC...TGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGATTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
CDS-3UTR CCA 90 bp CTCAGAGCTGTAGCTGGTGGCCGAAGAGCTGGTCTCTTGGGAGGCCAGCATGGCGAAGAGCTGGTCTCTTaGGAGGCCAGCATGGCGCCT +
Preference number: 4 (lower is better)
Translates to: LRAVAGGRRAGLLGGQHGEELVS*EASMAP
Trigger: AGGCGCCATGCTGGCCTCCCAAGAGACCAGCTCTTC...GCCATGCTGGCCTCCCAAGAGACCAGCTCTTCGGCCACCAGCTACAGCTCTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592559.1
CDS-3UTR CCA 90 bp TCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCACCCCATAAAAGCCAAGGTGTaGAGGGACCCCAGGCTTCCG +
Preference number: 4 (lower is better)
Translates to: SGCGQRASLTQPLERLHPIKAKV*RDPRLP
Trigger: CGGAAGCCTGGGGTCCCTCCACACCTTGGCTTTTAT...GGGGTGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp GGTGGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGCCTCCTGCAGTGTGCTaGACTCTAGGGAAAATGGCC +
Preference number: 4 (lower is better)
Translates to: GGAELLLRTPPAVCWTLGPPAVC*TLGKMA
Trigger: GGCCATTTTCCCTAGAGTCCAGCACACTGCAGGAGG...CCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AAGCCAAGGTGTGGAGGGACCCCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGCCTCCTGCAGTGTGCTaGACTCTAGGGAAAATGGCC +
Preference number: 4 (lower is better)
Translates to: KPRCGGTPGFRESAGSAGPPAVC*TLGKMA
Trigger: GGCCATTTTCCCTAGAGTCCAGCACACTGCAGGAGG...CCCAGCCGAACCAGCACTCTCCCGGAAGCCTGGGGTCCCTCCACACCTTGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp GGTGGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGTCTTCCTCGTGTATGTaGTTGGGGTGCTGTGCACCC +
Preference number: 4 (lower is better)
Translates to: GGAELLLRTPPAVCWTLGSSSCM*LGCCAP
Trigger: GGGTGCACAGCACCCCAACCACATACACGAGGAAGA...CCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp GGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGAAACAGAGACACAGGGACTaGCCCCTGAGCATCTCCCTG +
Preference number: 4 (lower is better)
Translates to: GAELLLRTPPAVCWTLGKQRHRD*PLSISL
Trigger: CAGGGAGATGCTCAGGGGCCAGTCCCTGTGTCTCTG...TTTCCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR CCA 90 bp GGAATCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCATGGTGCTCAGCTCGCTaGGCACCAGAGACACAGGGA +
Preference number: 4 (lower is better)
Translates to: GIWMWAACKSDAAPGEAAWCSAR*APETQG
Trigger: TCCCTGTGTCTCTGGTGCCCAGCGAGCTGAGCACCA...TGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGATTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR CCA 90 bp GGGACACAGCTCCCGGAGGCGTGGAGACAGGTCTCTGTCCCAGAGGACTTCAAGTGGTGCTCAGCTCGCTaGGCACCAGAGACACAGGGA +
Preference number: 4 (lower is better)
Translates to: GTQLPEAWRQVSVPEDFKWCSAR*APETQG
Trigger: TCCCTGTGTCTCTGGTGCCCAGCGAGCTGAGCACCA...CTTGAAGTCCTCTGGGACAGAGACCTGTCTCCACGCCTCCGGGAGCTGTGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR CCA 90 bp GGTGGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGCCCAGACTTGGCAGCTaGGATCTCTCCTTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: GGAELLLRTPPAVCWTLGPRLGS*DLSFLV
Trigger: AACCAGGAAGGAGAGATCCCAGCTGCCAAGTCTGGG...CCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR CCA 90 bp GGTGGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGTGCTACCCCCAGACTTaGCAGCTGGGATCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: GGAELLLRTPPAVCWTLGCYPQT*QLGSLL
Trigger: AAGGAGAGATCCCAGCTGCCAAGTCTGGGGGTAGCA...CCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR TCA 90 bp GGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGAAAAGCGGGAGATGCGAATaGCATCCTGGAGCACGCTCT +
Preference number: 4 (lower is better)
Translates to: GAELLLRTPPAVCWTLGKSGRCE*HPGARS
Trigger: AGAGCGTGCTCCAGGATGTCATTCGCATCTCCCGCT...TTTCCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp GGCCTGAGACTGCTGACCGCATCTTCTTCCTCGTGTATGTGGTTGGGGTGCTGTGGTGGTGCTCGGGGATaGTGTCGGCCAGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: GLRLLTASSSSCMWLGCCGGARG*CRPAAG
Trigger: ACCAGCTGCTGGCCGACATCATCCCCGAGCACCACC...ACAGCACCCCAACCACATACACGAGGAAGAAGATGCGGTCAGCAGTCTCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp GCTGAACTCAGAGCTGTAGCTGGTGGCCGAAGAGCTGGTCTCTTGGGAGGCCAGCAGGCTTGGTCTGCTTaGGGTGTCGCAGGATGGGGA +
Preference number: 4 (lower is better)
Translates to: AELRAVAGGRRAGLLGGQQAWSA*GVAGWG
Trigger: TCCCCATCCTGCGACACCTCAAGCAGACCAAGCCTG...CTGGCCTCCCAAGAGACCAGCTCTTCGGCCACCAGCTACAGCTCTGAGTTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592559.1
CDS-3UTR TCA 90 bp CTCAGGGACACAGCTCCCGGAGGCGTGGAGACAGGTCTCTGTCCCAGAGGACTTCCCCGTAGGTCTCCTTaGCAATGGTCTTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: LRDTAPGGVETGLCPRGLPRRSP*QWSSGP
Trigger: AGGCCCAGAAGACCATTGTCAAGGAGACCTACGGGG...AAGTCCTCTGGGACAGAGACCTGTCTCCACGCCTCCGGGAGCTGTGTCCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp GGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGAAATGGATTAAGCCACCCTaGGCTCTCCCTCCGCTAGCA +
Preference number: 4 (lower is better)
Translates to: GAELLLRTPPAVCWTLGKWIKPP*ALPPLA
Trigger: TGCTAGCGGAGGGAGAGCTCAGGGTGGCTTAATCCA...TTTCCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp AAAAGCCAAGGTGTGGAGGGACCCCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGTGGATTAAGCCACCCTaGGCTCTCCCTCCGCTAGCA +
Preference number: 4 (lower is better)
Translates to: KSQGVEGPQASGRVLVRLWIKPP*ALPPLA
Trigger: TGCTAGCGGAGGGAGAGCTCAGGGTGGCTTAATCCA...CAGCCGAACCAGCACTCTCCCGGAAGCCTGGGGTCCCTCCACACCTTGGCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp AGGCTGCACCCCATGGCAGGCGGCCTAGACTGTAAAGGGGCAGGGCCTGGGCTGGGGTGTTTCTTCAACTaGAGATGGCCTGAAATGGGC +
Preference number: 4 (lower is better)
Translates to: RLHPMAGGLDCKGAGPGLGCFFN*RWPEMG
Trigger: GCCCATTTCAGGCCATCTTCAGTTGAAGAAACACCC...CAGCCCAGGCCCTGCCCCTTTACAGTCTAGGCCGCCTGCCATGGGGTGCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR GCA 90 bp AGGCTGCACCCCATGGCAGGCGGCCTAGACTGTAAAGGGGCAGGGCCTGGGCTGTGCAGATTCTCCGTCTaGTTGTGCACAGGGATGATG +
Preference number: 4 (lower is better)
Translates to: RLHPMAGGLDCKGAGPGLCRFSV*LCTGMM
Trigger: CATCATCCCTGTGCACAAGCAGACGGAGAATCTGCA...CAGCCCAGGCCCTGCCCCTTTACAGTCTAGGCCGCCTGCCATGGGGTGCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp AGGCTGCACCCCATGGCAGGCGGCCTAGACTGTAAAGGGGCAGGGCCTGGGCTGTTCTCAACATTCTCCTaGAGCCGCTGCAGATTCTCC +
Preference number: 4 (lower is better)
Translates to: RLHPMAGGLDCKGAGPGLFSTFS*SRCRFS
Trigger: GGAGAATCTGCAGCGGCTGCAGGAGAATGTTGAGAA...CAGCCCAGGCCCTGCCCCTTTACAGTCTAGGCCGCCTGCCATGGGGTGCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp GGGACACAGCTCCCGGAGGCGTGGAGACAGGTCTCTGTCCCAGAGGACTTCAAGAGCTGGTACTCGCTCTaGGCCAGCTTGACGAAGGCA +
Preference number: 4 (lower is better)
Translates to: GTQLPEAWRQVSVPEDFKSWYSL*ASLTKA
Trigger: TGCCTTCGTCAAGCTGGCGCAGAGCGAGTACCAGCT...CTTGAAGTCCTCTGGGACAGAGACCTGTCTCCACGCCTCCGGGAGCTGTGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp CCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGAACACGGGCTGTGGGGAAAAAGTCTTCTTCTGGTGGTaGTCGGGGATGATGTCGGCC +
Preference number: 4 (lower is better)
Translates to: PGFRESAGSAGNTGCGEKVFFWW*SGMMSA
Trigger: GGCCGACATCATCCCCGAGCACCACCAGAAGAAGAC...TTTTTCCCCACAGCCCGTGTTCCCAGCCGAACCAGCACTCTCCCGGAAGCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp GGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGAAAGTCTTCTTCTGGTGGTaGTCGGGGATGATGTCGGCC +
Preference number: 4 (lower is better)
Translates to: GAELLLRTPPAVCWTLGKVFFWW*SGMMSA
Trigger: GGCCGACATCATCCCCGAGCACCACCAGAAGAAGAC...TTTCCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp CCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGAACACGGGCTGTGGGGAAAAACGCTCCTTGATAATCTaGCGCTCCTTGTCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: PGFRESAGSAGNTGCGEKRSLII*RSLSRS
Trigger: GCTCCGGGACAAGGAGCGGCAGATTATCAAGGAGCG...TTTTTCCCCACAGCCCGTGTTCCCAGCCGAACCAGCACTCTCCCGGAAGCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp AGGCTGCACCCCATGGCAGGCGGCCTAGACTGTAAAGGGGCAGGGCCTGGGCTGCACCCAATTCGTCTTTaGAGGAATCTGGATGTGGGC +
Preference number: 4 (lower is better)
Translates to: RLHPMAGGLDCKGAGPGLHPIRL*RNLDVG
Trigger: GCCCACATCCAGATTCCTGCAAAGACGAATTGGGTG...CAGCCCAGGCCCTGCCCCTTTACAGTCTAGGCCGCCTGCCATGGGGTGCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp GGGACACAGCTCCCGGAGGCGTGGAGACAGGTCTCTGTCCCAGAGGACTTCAAGCTCCCTTACCCAGTCTaGCCTGTTTCTCCCCGGTCA +
Preference number: 4 (lower is better)
Translates to: GTQLPEAWRQVSVPEDFKLPYPV*PVSPRS
Trigger: TGACCGGGGAGAAACAGGGCAGACTGGGTAAGGGAG...CTTGAAGTCCTCTGGGACAGAGACCTGTCTCCACGCCTCCGGGAGCTGTGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR CCA 90 bp CCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGAACACGGGCTGTGGGGAAAAACCCTGGCCGCTTGACTaGCTTCTTGGTAGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: PGFRESAGSAGNTGCGEKPWPLD*LLGRCV
Trigger: GACACACCTACCAAGAAGCCAGTCAAGCGGCCAGGG...TTTTTCCCCACAGCCCGTGTTCCCAGCCGAACCAGCACTCTCCCGGAAGCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp GGTGGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGAAGGTCTTCTTCTGGTaGTGCTCGGGGATGATGTCG +
Preference number: 4 (lower is better)
Translates to: GGAELLLRTPPAVCWTLGKVFFW*CSGMMS
Trigger: CGACATCATCCCCGAGCACCACCAGAAGAAGACCTT...CCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp CTCAGGGACACAGCTCCCGGAGGCGTGGAGACAGGTCTCTGTCCCAGAGGACTTAGTCCTCCAGCGCTTTaGCACCGATGGTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: LRDTAPGGVETGLCPRGLSPPAL*HRWSPW
Trigger: CCATGGAGACCATCGGTGCCAAAGCGCTGGAGGACT...AAGTCCTCTGGGACAGAGACCTGTCTCCACGCCTCCGGGAGCTGTGTCCCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp CTCAGAGCTGTAGCTGGTGGCCGAAGAGCTGGTCTCTTGGGAGGCCAGCATGGCAGTCCTCCAGCGCTTTaGCACCGATGGTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: LRAVAGGRRAGLLGGQHGSPPAL*HRWSPW
Trigger: CCATGGAGACCATCGGTGCCAAAGCGCTGGAGGACT...GCCATGCTGGCCTCCCAAGAGACCAGCTCTTCGGCCACCAGCTACAGCTCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592559.1
CDS-3UTR CCA 90 bp AGGCTTGGTCTGCTTGAGGTGTCGCAGGATGGGGAAGACGGTGAGCACCGTGGATGGTGGCCGAAGAGCTaGTCTCTTGGGAGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: RLGLLEVSQDGEDGEHRGWWPKS*SLGRPA
Trigger: TGCTGGCCTCCCAAGAGACCAGCTCTTCGGCCACCA...TCCACGGTGCTCACCGTCTTCCCCATCCTGCGACACCTCAAGCAGACCAAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592559.1
CDS-3UTR CCA 90 bp GGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGAAAGATGGCGCTCAGAGCTaGGTCCTCGTACACCTTGGA +
Preference number: 4 (lower is better)
Translates to: GAELLLRTPPAVCWTLGKDGAQS*VLVHLG
Trigger: TCCAAGGTGTACGAGGACCCAGCTCTGAGCGCCATC...TTTCCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp CCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGAACACGGGCTGTGGGGAAAAAATGGTCTTCTGGGCCTaGCGAATCCTGTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: PGFRESAGSAGNTGCGEKMVFWA*RILSLC
Trigger: GCAGAGGGACAGGATTCGCCAGGCCCAGAAGACCAT...TTTTTCCCCACAGCCCGTGTTCCCAGCCGAACCAGCACTCTCCCGGAAGCCTGG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AAGCCAAGGTGTGGAGGGACCCCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGTTGACAATGGTCTTCTaGGCCTGGCGAATCCTGTCC +
Preference number: 4 (lower is better)
Translates to: KPRCGGTPGFRESAGSAGLTMVF*AWRILS
Trigger: GGACAGGATTCGCCAGGCCCAGAAGACCATTGTCAA...CCCAGCCGAACCAGCACTCTCCCGGAAGCCTGGGGTCCCTCCACACCTTGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp CTCAGGGACACAGCTCCCGGAGGCGTGGAGACAGGTCTCTGTCCCAGAGGACTTTGGGAACACGGGCTGTaGGGAAAAAGCAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: LRDTAPGGVETGLCPRGLWEHGL*GKSRSQ
Trigger: CTGGCTCCTGCTTTTTCCCCACAGCCCGTGTTCCCA...AAGTCCTCTGGGACAGAGACCTGTCTCCACGCCTCCGGGAGCTGTGTCCCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AAAAGCCAAGGTGTGGAGGGACCCCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGCCCTGCCACATCTCTaGGCTGTAGGGGAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: KSQGVEGPQASGRVLVRLALPHL*AVGEFS
Trigger: AGAGAACTCCCCTACAGCCCAGAGATGTGGCAGGGC...CAGCCGAACCAGCACTCTCCCGGAAGCCTGGGGTCCCTCCACACCTTGGCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AAAAGCCAAGGTGTGGAGGGACCCCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGCCATCATCGCTCTCTTaGTGCCTGCAGAGGCACTGC +
Preference number: 4 (lower is better)
Translates to: KSQGVEGPQASGRVLVRLPSSLS*CLQRHC
Trigger: GCAGTGCCTCTGCAGGCACCAAGAGAGCGATGATGG...CAGCCGAACCAGCACTCTCCCGGAAGCCTGGGGTCCCTCCACACCTTGGCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR TCA 90 bp GGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGAAAGCAGTTTCACTTTGTTaGGTTCCGGGCTGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: GAELLLRTPPAVCWTLGKAVSLC*VPGCLG
Trigger: GCCCAGACAGCCCGGAACTCAACAAAGTGAAACTGC...TTTCCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp TCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCACCCCTGTTTCAGAAGGTTCTaGGCCTTACGGATCGTCCCT +
Preference number: 4 (lower is better)
Translates to: SGCGQRASLTQPLERLHPCFRRF*ALRIVP
Trigger: AGGGACGATCCGTAAGGCTCAGAACCTTCTGAAACA...GGGGTGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp CCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGAACACGGGCTGTGGGGAAAAAGCTCCACCCCGTACTTaGTGTACTTCTCCGGGTTCT +
Preference number: 4 (lower is better)
Translates to: PGFRESAGSAGNTGCGEKAPPRT*CTSPGS
Trigger: AGAACCCGGAGAAGTACATCAAGTACGGGGTGGAGC...TTTTTCCCCACAGCCCGTGTTCCCAGCCGAACCAGCACTCTCCCGGAAGCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp TTTTCCCCATTGTCCCTGTCTCCCAGCCCACAGGCAGGCAGCCTAATTGCTCCTAGGGAAAATGGCCAGTaGGCCTGCCTCCCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: FSPLSLSPSPQAGSLIAPRENGQ*ACLPQP
Trigger: TGGCTGGGGGAGGCAGGCTCACTGGCCATTTTCCCT...AGGAGCAATTAGGCTGCCTGCCTGTGGGCTGGGAGACAGGGACAATGGGGAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp AAAAGCCAAGGTGTGGAGGGACCCCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGTTCTCCTGCAGCCGCTaGAGATTCTCCGTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: KSQGVEGPQASGRVLVRLFSCSR*RFSVCL
Trigger: CAAGCAGACGGAGAATCTGCAGCGGCTGCAGGAGAA...CAGCCGAACCAGCACTCTCCCGGAAGCCTGGGGTCCCTCCACACCTTGGCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp GGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGAAAATCATGTCGCCCACCTaGTCCACCCCGTACTTGATG +
Preference number: 4 (lower is better)
Translates to: GAELLLRTPPAVCWTLGKIMSPT*STPYLM
Trigger: CATCAAGTACGGGGTGGAGCAGGTGGGCGACATGAT...TTTCCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp CCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGAACACGGGCTGTGGGGAAAAAATCATGTCGCCCACCTaGTCCACCCCGTACTTGATG +
Preference number: 4 (lower is better)
Translates to: PGFRESAGSAGNTGCGEKIMSPT*STPYLM
Trigger: CATCAAGTACGGGGTGGAGCAGGTGGGCGACATGAT...TTTTTCCCCACAGCCCGTGTTCCCAGCCGAACCAGCACTCTCCCGGAAGCCTGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp AAAAGCCAAGGTGTGGAGGGACCCCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGCCTAATTGCTCCTTCTaGAACCACGACTGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: KSQGVEGPQASGRVLVRLPNCSF*NHDCLA
Trigger: GGCCAGGCAGTCGTGGTTGCAGAAGGAGCAATTAGG...CAGCCGAACCAGCACTCTCCCGGAAGCCTGGGGTCCCTCCACACCTTGGCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp AAGCCAAGGTGTGGAGGGACCCCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGTGTATGTGGTTGGGGTaGTGTGCACCCAATTCGTCT +
Preference number: 4 (lower is better)
Translates to: KPRCGGTPGFRESAGSAGCMWLG*CAPNSS
Trigger: AGACGAATTGGGTGCACAGCACCCCAACCACATACA...CCCAGCCGAACCAGCACTCTCCCGGAAGCCTGGGGTCCCTCCACACCTTGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp CCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGAACACGGGCTGTGGGGAAAAACATCTCCCTGTGCCCTaGCTCCCCCAGTTTACTACT +
Preference number: 4 (lower is better)
Translates to: PGFRESAGSAGNTGCGEKHLPVP*LPQFTT
Trigger: AGTAGTAAACTGGGGGAGGCAGGGCACAGGGAGATG...TTTTTCCCCACAGCCCGTGTTCCCAGCCGAACCAGCACTCTCCCGGAAGCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR GCA 90 bp AAAAGCCAAGGTGTGGAGGGACCCCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGTCATCGCTCTCTTGGTaGCTGCAGAGGCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: KSQGVEGPQASGRVLVRLSSLSW*LQRHCC
Trigger: ACAGCAGTGCCTCTGCAGGCACCAAGAGAGCGATGA...CAGCCGAACCAGCACTCTCCCGGAAGCCTGGGGTCCCTCCACACCTTGGCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR CCA 90 bp TTTCCCTGTATCTCTCCCCACAGAGCCCTCCAGAGGAGTAAAGGGGTCACAGAGAGGCAGGCCGCCCCTTaGGGTACAGGGAAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: FPCISPHRALQRSKGVTERQAAP*GTGKKP
Trigger: GGGCTTCTTCCCTGTACCCCAAGGGGCGGCCTGCCT...CTCTGTGACCCCTTTACTCCTCTGGAGGGCTCTGTGGGGAGAGATACAGGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335146.11
CDS-3UTR CCA 90 bp TTTTCCCCATTGTCCCTGTCTCCCAGCCCACAGGCAGGCAGCCTAATTGCTCCTATGTCGGCCAGCAGCTaGTACTCGCTCTGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: FSPLSLSPSPQAGSLIAPMSASS*YSLCAS
Trigger: GCTGGCGCAGAGCGAGTACCAGCTGCTGGCCGACAT...AGGAGCAATTAGGCTGCCTGCCTGTGGGCTGGGAGACAGGGACAATGGGGAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp CTTGAGGTGTCGCAGGATGGGGAAGACGGTGAGCACCGTGGAGAAGTCGTGTCGAGTCGTGTCGCACAATaGCCTTCCGGGCAGCAGACA +
Preference number: 4 (lower is better)
Translates to: LEVSQDGEDGEHRGEVVSSRVAQ*PSGQQT
Trigger: TGTCTGCTGCCCGGAAGGCCATTGTGCGACACGACT...CGACACGACTTCTCCACGGTGCTCACCGTCTTCCCCATCCTGCGACACCTCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592559.1
CDS-3UTR CCA 90 bp GGGACACAGCTCCCGGAGGCGTGGAGACAGGTCTCTGTCCCAGAGGACTTCAAGACTCAGAGCTGTAGCTaGTGGCCGAAGAGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: GTQLPEAWRQVSVPEDFKTQSCS*WPKSWS
Trigger: AGACCAGCTCTTCGGCCACCAGCTACAGCTCTGAGT...CTTGAAGTCCTCTGGGACAGAGACCTGTCTCCACGCCTCCGGGAGCTGTGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp GGAATCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCAACTCAGAGCTGTAGCTaGTGGCCGAAGAGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: GIWMWAACKSDAAPGEAATQSCS*WPKSWS
Trigger: AGACCAGCTCTTCGGCCACCAGCTACAGCTCTGAGT...TGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGATTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp CTTGAGGTGTCGCAGGATGGGGAAGACGGTGAGCACCGTGGAGAAGTCGTGTCGGATGGCGCTCAGAGCTaGGTCCTCGTACACCTTGGA +
Preference number: 4 (lower is better)
Translates to: LEVSQDGEDGEHRGEVVSDGAQS*VLVHLG
Trigger: TCCAAGGTGTACGAGGACCCAGCTCTGAGCGCCATC...CGACACGACTTCTCCACGGTGCTCACCGTCTTCCCCATCCTGCGACACCTCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592559.1
CDS-3UTR CCA 90 bp TCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCACCCCAGCTTGACTCCCGGCTaGAACACAGGTAGATTCTTC +
Preference number: 4 (lower is better)
Translates to: SGCGQRASLTQPLERLHPSLTPG*NTGRFF
Trigger: GAAGAATCTACCTGTGTTCCAGCCGGGAGTCAAGCT...GGGGTGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp TTTTCCCCATTGTCCCTGTCTCCCAGCCCACAGGCAGGCAGCCTAATTGCTCCTCAGCTCCCGGAGGCGTaGAGACAGGTCTCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: FSPLSLSPSPQAGSLIAPQLPEA*RQVSVP
Trigger: TGGGACAGAGACCTGTCTCCACGCCTCCGGGAGCTG...AGGAGCAATTAGGCTGCCTGCCTGTGGGCTGGGAGACAGGGACAATGGGGAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp GGCCTGAGACTGCTGACCGCATCTTCTTCCTCGTGTATGTGGTTGGGGTGCTGTCTTCCGGGAGAGTGCTaGTTCGGCTGGGAACACGGG +
Preference number: 4 (lower is better)
Translates to: GLRLLTASSSSCMWLGCCLPGEC*FGWEHG
Trigger: CCCGTGTTCCCAGCCGAACCAGCACTCTCCCGGAAG...ACAGCACCCCAACCACATACACGAGGAAGAAGATGCGGTCAGCAGTCTCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp GGGACACAGCTCCCGGAGGCGTGGAGACAGGTCTCTGTCCCAGAGGACTTCAAGATAAAAGCCAAGGTGTaGAGGGACCCCAGGCTTCCG +
Preference number: 4 (lower is better)
Translates to: GTQLPEAWRQVSVPEDFKIKAKV*RDPRLP
Trigger: CGGAAGCCTGGGGTCCCTCCACACCTTGGCTTTTAT...CTTGAAGTCCTCTGGGACAGAGACCTGTCTCCACGCCTCCGGGAGCTGTGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp GGGACACAGCTCCCGGAGGCGTGGAGACAGGTCTCTGTCCCAGAGGACTTCAAGCTGCCCTGCTGCTCTTaGTACACATGGAGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: GTQLPEAWRQVSVPEDFKLPCCS*YTWSSS
Trigger: ACTGCTGCTCCATGTGTACCAAGAGCAGCAGGGCAG...CTTGAAGTCCTCTGGGACAGAGACCTGTCTCCACGCCTCCGGGAGCTGTGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp TTTCCCTGTATCTCTCCCCACAGAGCCCTCCAGAGGAGTAAAGGGGTCACAGAGGCAACCACGACTGCCTaGCCCTGGGCCAAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: FPCISPHRALQRSKGVTEATTTA*PWAKRH
Trigger: GTGCCTCTTGGCCCAGGGCCAGGCAGTCGTGGTTGC...CTCTGTGACCCCTTTACTCCTCTGGAGGGCTCTGTGGGGAGAGATACAGGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp TTTTCCCCATTGTCCCTGTCTCCCAGCCCACAGGCAGGCAGCCTAATTGCTCCTTTGCTTTCCCATGGCTaGGGGCGGGCCATGACAGGG +
Preference number: 4 (lower is better)
Translates to: FSPLSLSPSPQAGSLIAPLLSHG*GRAMTG
Trigger: CCCTGTCATGGCCCGCCCCCAGCCATGGGAAAGCAA...AGGAGCAATTAGGCTGCCTGCCTGTGGGCTGGGAGACAGGGACAATGGGGAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp CCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGAACACGGGCTGTGGGGAAAAAGCAGGAATCTGGATGTaGGCAGCGTGCAAGTCTGAC +
Preference number: 4 (lower is better)
Translates to: PGFRESAGSAGNTGCGEKAGIWM*AACKSD
Trigger: GTCAGACTTGCACGCTGCCCACATCCAGATTCCTGC...TTTTTCCCCACAGCCCGTGTTCCCAGCCGAACCAGCACTCTCCCGGAAGCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp GGAATCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCATCTTCCTCGTGTATGTaGTTGGGGTGCTGTGCACCC +
Preference number: 4 (lower is better)
Translates to: GIWMWAACKSDAAPGEAASSSCM*LGCCAP
Trigger: GGGTGCACAGCACCCCAACCACATACACGAGGAAGA...TGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGATTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AGGCTTGGTCTGCTTGAGGTGTCGCAGGATGGGGAAGACGGTGAGCACCGTGGACCATCCAGGGCATCCTaGCCGCTTGACTGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: RLGLLEVSQDGEDGEHRGPSRAS*PLDWLL
Trigger: AAGAAGCCAGTCAAGCGGCCAGGATGCCCTGGATGG...TCCACGGTGCTCACCGTCTTCCCCATCCTGCGACACCTCAAGCAGACCAAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592559.1
CDS-3UTR TCA 90 bp GCAAGTGTGCCTCAAGGGTCAGTCTTCAATCTCGTCCTAAATAGGTGGGGCCCTGGTGGTGCTCGGGGATaGTGTCGGCCAGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: ASVPQGSVFNLVLNRWGPGGARG*CRPAAG
Trigger: ACCAGCTGCTGGCCGACATCATCCCCGAGCACCACC...AGGGCCCCACCTATTTAGGACGAGATTGAAGACTGACCCTTGAGGCACACTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp GGCCTGAGACTGCTGACCGCATCTTCTTCCTCGTGTATGTGGTTGGGGTGCTGTGGATGGCATTGCTGGTaGGCTCGTGTACGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: GLRLLTASSSSCMWLGCCGWHCW*ARVRCR
Trigger: ACGGCACCGTACACGAGCTCACCAGCAATGCCATCC...ACAGCACCCCAACCACATACACGAGGAAGAAGATGCGGTCAGCAGTCTCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp AAGCCAAGGTGTGGAGGGACCCCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGCACAAGCACAGAGCGTaGAATAAACCCATCTCCAGT +
Preference number: 4 (lower is better)
Translates to: KPRCGGTPGFRESAGSAGHKHRA*NKPISS
Trigger: ACTGGAGATGGGTTTATTTCACGCTCTGTGCTTGTG...CCCAGCCGAACCAGCACTCTCCCGGAAGCCTGGGGTCCCTCCACACCTTGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp CAGCCCAGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGGCTGGGGGCGGGCCATaGCAGGGCCTCTGGATTAAG +
Preference number: 4 (lower is better)
Translates to: QPRGKLTLVYLSNDTPVWAGGGP*QGLWIK
Trigger: CTTAATCCAGAGGCCCTGTCATGGCCCGCCCCCAGC...CCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCTGGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp TGTGCACCCAATTCGTCTTTGCAGGAATCTGGATGTGGGCAGCGTGCAAGTCTGGCTGGGGGCGGGCCATaGCAGGGCCTCTGGATTAAG +
Preference number: 4 (lower is better)
Translates to: CAPNSSLQESGCGQRASLAGGGP*QGLWIK
Trigger: CTTAATCCAGAGGCCCTGTCATGGCCCGCCCCCAGC...CAGACTTGCACGCTGCCCACATCCAGATTCCTGCAAAGACGAATTGGGTGCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp GGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGAAACTCTTCCGCTCATGTTaGGGGGACCTTGAAGAACAG +
Preference number: 4 (lower is better)
Translates to: GAELLLRTPPAVCWTLGKLFRSC*GDLEEQ
Trigger: CTGTTCTTCAAGGTCCCCTCAACATGAGCGGAAGAG...TTTCCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp CTCAGGGACACAGCTCCCGGAGGCGTGGAGACAGGTCTCTGTCCCAGAGGACTTCTCTTCCGCTCATGTTaGGGGGACCTTGAAGAACAG +
Preference number: 4 (lower is better)
Translates to: LRDTAPGGVETGLCPRGLLFRSC*GDLEEQ
Trigger: CTGTTCTTCAAGGTCCCCTCAACATGAGCGGAAGAG...AAGTCCTCTGGGACAGAGACCTGTCTCCACGCCTCCGGGAGCTGTGTCCCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp CAGCCCAGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGACGCTCTCGGGCAGGTaGTCCAGGGTCACGTCCTCC +
Preference number: 4 (lower is better)
Translates to: QPRGKLTLVYLSNDTPVWTLSGR*SRVTSS
Trigger: GGAGGACGTGACCCTGGAGCACCTGCCCGAGAGCGT...CCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCTGGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp GGTGGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGCCCCAGAGGAAGAACTaGTCTTATGGAAATGCTCCT +
Preference number: 4 (lower is better)
Translates to: GGAELLLRTPPAVCWTLGPQRKN*SYGNAP
Trigger: AGGAGCATTTCCATAAGAGCAGTTCTTCCTCTGGGG...CCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp GGTGGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGAGGCCTTCTGGATTTTaGACAGTTCTTCGAGGCCAT +
Preference number: 4 (lower is better)
Translates to: GGAELLLRTPPAVCWTLGRPSGF*TVLRGH
Trigger: ATGGCCTCGAAGAACTGTGCAAAATCCAGAAGGCCT...CCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp AGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACAGCCCCTGGAGAGGCTaGACCCCATGGCAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: RGKLTLVYLSNDTPVWWNSPWRG*TPWQAA
Trigger: GGCCGCCTGCCATGGGGTGCAGCCTCTCCAGGGGCT...GTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp TTTTCCCCATTGTCCCTGTCTCCCAGCCCACAGGCAGGCAGCCTAATTGCTCCTTGGATGTGGGCAGCGTaGAAGTCTGACGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: FSPLSLSPSPQAGSLIAPWMWAA*KSDAAP
Trigger: AGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCA...AGGAGCAATTAGGCTGCCTGCCTGTGGGCTGGGAGACAGGGACAATGGGGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp GGCCTGAGACTGCTGACCGCATCTTCTTCCTCGTGTATGTGGTTGGGGTGCTGTCCTCCTGCAACCCACTaGTCAGTAAGCCCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: GLRLLTASSSSCMWLGCCPPATH*SVSPAP
Trigger: GGGAGCAGGGCTTACTGAGCAGTGGGTTGCAGGAGG...ACAGCACCCCAACCACATACACGAGGAAGAAGATGCGGTCAGCAGTCTCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR GCA 90 bp GGCCTGAGACTGCTGACCGCATCTTCTTCCTCGTGTATGTGGTTGGGGTGCTGTTGCCTGCAGAGGCACTaGTGTTGGCTGACGTGTGCG +
Preference number: 4 (lower is better)
Translates to: GLRLLTASSSSCMWLGCCCLQRH*CWLTCA
Trigger: CGCACACGTCAGCCAACAGCAGTGCCTCTGCAGGCA...ACAGCACCCCAACCACATACACGAGGAAGAAGATGCGGTCAGCAGTCTCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR GCA 90 bp CATGTTGAGGGGACCTTGAAGAACAGCTCCTTTCCCTGTATCTCTCCCCACAGAAGAGGCCAGGCCCCATaGCCCCGATGCCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: HVEGTLKNSSFPCISPHRRGQAP*PRCPPP
Trigger: AGGAGGTGGGCATCGGGGGCATGGGGCCTGGCCTCT...TCTGTGGGGAGAGATACAGGGAAAGGAGCTGTTCTTCAAGGTCCCCTCAACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR GCA 90 bp AAGCCAAGGTGTGGAGGGACCCCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGGTCCAAGTCTGTCCCTaGCAAAAGCCATCAAAAGTC +
Preference number: 4 (lower is better)
Translates to: KPRCGGTPGFRESAGSAGVQVCP*QKPSKV
Trigger: GACTTTTGATGGCTTTTGGCAGGGACAGACTTGGAC...CCCAGCCGAACCAGCACTCTCCCGGAAGCCTGGGGTCCCTCCACACCTTGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR CCA 90 bp AGGCTGCACCCCATGGCAGGCGGCCTAGACTGTAAAGGGGCAGGGCCTGGGCTGCCATCTAGACCATGCTaGGAATACTGTTTCAGAAGG +
Preference number: 4 (lower is better)
Translates to: RLHPMAGGLDCKGAGPGLPSRPC*EYCFRR
Trigger: CCTTCTGAAACAGTATTCCCAGCATGGTCTAGATGG...CAGCCCAGGCCCTGCCCCTTTACAGTCTAGGCCGCCTGCCATGGGGTGCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AAAAGCCAAGGTGTGGAGGGACCCCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGTCGAAGGTCTTCTTCTaGTGGTGCTCGGGGATGATG +
Preference number: 4 (lower is better)
Translates to: KSQGVEGPQASGRVLVRLSKVFF*WCSGMM
Trigger: CATCATCCCCGAGCACCACCAGAAGAAGACCTTCGA...CAGCCGAACCAGCACTCTCCCGGAAGCCTGGGGTCCCTCCACACCTTGGCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp CTTGAGGTGTCGCAGGATGGGGAAGACGGTGAGCACCGTGGAGAAGTCGTGTCGCAGAGCTGTAGCTGGTaGCCGAAGAGCTGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: LEVSQDGEDGEHRGEVVSQSCSW*PKSWSL
Trigger: AAGAGACCAGCTCTTCGGCCACCAGCTACAGCTCTG...CGACACGACTTCTCCACGGTGCTCACCGTCTTCCCCATCCTGCGACACCTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592559.1
CDS-3UTR CCA 90 bp TTTCCCTGTATCTCTCCCCACAGAGCCCTCCAGAGGAGTAAAGGGGTCACAGAGCAGCTCCCGGAGGCGTaGAGACAGGTCTCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: FPCISPHRALQRSKGVTEQLPEA*RQVSVP
Trigger: TGGGACAGAGACCTGTCTCCACGCCTCCGGGAGCTG...CTCTGTGACCCCTTTACTCCTCTGGAGGGCTCTGTGGGGAGAGATACAGGGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp GGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGAAAGTCTTTGCAGGAATCTaGATGTGGGCAGCGTGCAAG +
Preference number: 4 (lower is better)
Translates to: GAELLLRTPPAVCWTLGKVFAGI*MWAACK
Trigger: CTTGCACGCTGCCCACATCCAGATTCCTGCAAAGAC...TTTCCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp TTTTCCCCATTGTCCCTGTCTCCCAGCCCACAGGCAGGCAGCCTAATTGCTCCTGGGTCACAGAGAAGCTaGCCTGAGACTGCTGACCGC +
Preference number: 4 (lower is better)
Translates to: FSPLSLSPSPQAGSLIAPGSQRS*PETADR
Trigger: GCGGTCAGCAGTCTCAGGCCAGCTTCTCTGTGACCC...AGGAGCAATTAGGCTGCCTGCCTGTGGGCTGGGAGACAGGGACAATGGGGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp TCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCACCCCTGGGAAGCCCTTCTATaGATCGGTTTTGTGTCCAAG +
Preference number: 4 (lower is better)
Translates to: SGCGQRASLTQPLERLHPWEALL*IGFVSK
Trigger: CTTGGACACAAAACCGATCCATAGAAGGGCTTCCCA...GGGGTGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR CCA 90 bp AGGCTTGGTCTGCTTGAGGTGTCGCAGGATGGGGAAGACGGTGAGCACCGTGGATCCTGGCCGCTTGACTaGCTTCTTGGTAGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: RLGLLEVSQDGEDGEHRGSWPLD*LLGRCV
Trigger: GACACACCTACCAAGAAGCCAGTCAAGCGGCCAGGA...TCCACGGTGCTCACCGTCTTCCCCATCCTGCGACACCTCAAGCAGACCAAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592559.1
CDS-3UTR TCA 90 bp TTTCCCTGTATCTCTCCCCACAGAGCCCTCCAGAGGAGTAAAGGGGTCACAGAGGCTCCTTCAGTCCTTTaGTGGAGCGGTCCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: FPCISPHRALQRSKGVTEAPSVL*WSGPAG
Trigger: GCCAGCTGGACCGCTCCATCAAAGGACTGAAGGAGC...CTCTGTGACCCCTTTACTCCTCTGGAGGGCTCTGTGGGGAGAGATACAGGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp CATGTTGAGGGGACCTTGAAGAACAGCTCCTTTCCCTGTATCTCTCCCCACAGAGGTGGTGCTCGGGGATaGTGTCGGCCAGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: HVEGTLKNSSFPCISPHRGGARG*CRPAAG
Trigger: ACCAGCTGCTGGCCGACATCATCCCCGAGCACCACC...TCTGTGGGGAGAGATACAGGGAAAGGAGCTGTTCTTCAAGGTCCCCTCAACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp TTTCCCTGTATCTCTCCCCACAGAGCCCTCCAGAGGAGTAAAGGGGTCACAGAGGGATGGGGAAGACGGTaGGCACCGTGGAGAAGTCGT +
Preference number: 4 (lower is better)
Translates to: FPCISPHRALQRSKGVTEGWGRR*APWRSR
Trigger: ACGACTTCTCCACGGTGCTCACCGTCTTCCCCATCC...CTCTGTGACCCCTTTACTCCTCTGGAGGGCTCTGTGGGGAGAGATACAGGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp AGGCTGCACCCCATGGCAGGCGGCCTAGACTGTAAAGGGGCAGGGCCTGGGCTGACTTCTCCAGGGACTTaGGGATGTAATTGTAGTTGT +
Preference number: 4 (lower is better)
Translates to: RLHPMAGGLDCKGAGPGLTSPGT*GCNCSC
Trigger: ACAACTACAATTACATCCTCAAGTCCCTGGAGAAGT...CAGCCCAGGCCCTGCCCCTTTACAGTCTAGGCCGCCTGCCATGGGGTGCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp GGAATCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCAGGTTTATCTGTCCAATaGCACGCCAGTCTGGTGGAA +
Preference number: 4 (lower is better)
Translates to: GIWMWAACKSDAAPGEAAGLSVQ*HASLVE
Trigger: TTCCACCAGACTGGCGTGTCATTGGACAGATAAACC...TGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp CTCAGGGACACAGCTCCCGGAGGCGTGGAGACAGGTCTCTGTCCCAGAGGACTTATGTTGAGGGGACCTTaGAGAACAGCTCCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: LRDTAPGGVETGLCPRGLMLRGP*RTAPFP
Trigger: AGGGAAAGGAGCTGTTCTTCAAGGTCCCCTCAACAT...AAGTCCTCTGGGACAGAGACCTGTCTCCACGCCTCCGGGAGCTGTGTCCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp GGAATCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCAGGGTGTTTCTTCAACTaGAGATGGCCTGAAATGGGC +
Preference number: 4 (lower is better)
Translates to: GIWMWAACKSDAAPGEAAGCFFN*RWPEMG
Trigger: GCCCATTTCAGGCCATCTTCAGTTGAAGAAACACCC...TGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR GCA 90 bp CCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGAACACGGGCTGTGGGGAAAAATTCTCCGTCTGCTTGTaGACAGGGATGATGGAGTTC +
Preference number: 4 (lower is better)
Translates to: PGFRESAGSAGNTGCGEKFSVCL*TGMMEF
Trigger: GAACTCCATCATCCCTGTGCACAAGCAGACGGAGAA...TTTTTCCCCACAGCCCGTGTTCCCAGCCGAACCAGCACTCTCCCGGAAGCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp GGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGAAATTCTCCGTCTGCTTGTaGACAGGGATGATGGAGTTC +
Preference number: 4 (lower is better)
Translates to: GAELLLRTPPAVCWTLGKFSVCL*TGMMEF
Trigger: GAACTCCATCATCCCTGTGCACAAGCAGACGGAGAA...TTTCCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp TTTCCCTGTATCTCTCCCCACAGAGCCCTCCAGAGGAGTAAAGGGGTCACAGAGGCCGCGTCATCAGGCTaGGAAATTCGGACTCCAGGG +
Preference number: 4 (lower is better)
Translates to: FPCISPHRALQRSKGVTEAASSG*EIRTPG
Trigger: CCCTGGAGTCCGAATTTCGCAGCCTGATGACGCGGC...CTCTGTGACCCCTTTACTCCTCTGGAGGGCTCTGTGGGGAGAGATACAGGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp TTTTCCCCATTGTCCCTGTCTCCCAGCCCACAGGCAGGCAGCCTAATTGCTCCTCGCTCCTTGATAATCTaGCGCTCCTTGTCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: FSPLSLSPSPQAGSLIAPRSLII*RSLSRS
Trigger: GCTCCGGGACAAGGAGCGGCAGATTATCAAGGAGCG...AGGAGCAATTAGGCTGCCTGCCTGTGGGCTGGGAGACAGGGACAATGGGGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp GGCCTGAGACTGCTGACCGCATCTTCTTCCTCGTGTATGTGGTTGGGGTGCTGTGCCCTTCTGCCCTGCTaGTCTTGGTACACATGGAGC +
Preference number: 4 (lower is better)
Translates to: GLRLLTASSSSCMWLGCCALLPC*SWYTWS
Trigger: GCTCCATGTGTACCAAGAGCAGCAGGGCAGAAGGGC...ACAGCACCCCAACCACATACACGAGGAAGAAGATGCGGTCAGCAGTCTCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp GGAATCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCATGTATGTGGTTGGGGTaGTGTGCACCCAATTCGTCT +
Preference number: 4 (lower is better)
Translates to: GIWMWAACKSDAAPGEAACMWLG*CAPNSS
Trigger: AGACGAATTGGGTGCACAGCACCCCAACCACATACA...TGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAAGAGGCCAGGCCCCATaGCCCCGATGCCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQARGQAP*PRCPPP
Trigger: AGGAGGTGGGCATCGGGGGCATGGGGCCTGGCCTCT...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR GCA 90 bp AGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACAGGCCGACAGAGGGCTaGTGGAGGCGGGTGGGAGTG +
Preference number: 4 (lower is better)
Translates to: RGKLTLVYLSNDTPVWWNRPTEG*WRRVGV
Trigger: CACTCCCACCCGCCTCCAGCAGCCCTCTGTCGGCCT...GTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR GCA 90 bp GCAAGTGTGCCTCAAGGGTCAGTCTTCAATCTCGTCCTAAATAGGTGGGGCCCTCCCTGGGCTCCAGTCTaGTACCCCCAGACTTGGCAG +
Preference number: 4 (lower is better)
Translates to: ASVPQGSVFNLVLNRWGPPWAPV*YPQTWQ
Trigger: CTGCCAAGTCTGGGGGTAGCAGACTGGAGCCCAGGG...AGGGCCCCACCTATTTAGGACGAGATTGAAGACTGACCCTTGAGGCACACTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR CCA 90 bp TTTTCCCCATTGTCCCTGTCTCCCAGCCCACAGGCAGGCAGCCTAATTGCTCCTATGCGAATGACATCCTaGAGCACGCTCTCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: FSPLSLSPSPQAGSLIAPMRMTS*STLSGR
Trigger: CCTGCCCGAGAGCGTGCTCCAGGATGTCATTCGCAT...AGGAGCAATTAGGCTGCCTGCCTGTGGGCTGGGAGACAGGGACAATGGGGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp TCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCACCCCACGTTCATGAAATCTTaGTTGCGGCCATATTCCACC +
Preference number: 4 (lower is better)
Translates to: SGCGQRASLTQPLERLHPTFMKS*LRPYST
Trigger: GGTGGAATATGGCCGCAACCAAGATTTCATGAACGT...GGGGTGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp GGCCTGAGACTGCTGACCGCATCTTCTTCCTCGTGTATGTGGTTGGGGTGCTGTCCCTGGCCGCTTGACTaGCTTCTTGGTAGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: GLRLLTASSSSCMWLGCCPWPLD*LLGRCV
Trigger: GACACACCTACCAAGAAGCCAGTCAAGCGGCCAGGG...ACAGCACCCCAACCACATACACGAGGAAGAAGATGCGGTCAGCAGTCTCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGCTTGGGAGGCCAGCATaGCGCCTGCCGTCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQLGRPA*RLPSPG
Trigger: TCCAGGAGACGGCAGGCGCCATGCTGGCCTCCCAAG...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp GTGTCGCAGGATGGGGAAGACGGTGAGCACCGTGGAGAAGTCGTGTCGCACAATACTCAGAGCTGTAGCTaGTGGCCGAAGAGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: VSQDGEDGEHRGEVVSHNTQSCS*WPKSWS
Trigger: AGACCAGCTCTTCGGCCACCAGCTACAGCTCTGAGT...ATTGTGCGACACGACTTCTCCACGGTGCTCACCGTCTTCCCCATCCTGCGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592559.1
CDS-3UTR CCA 90 bp TTTTCCCCATTGTCCCTGTCTCCCAGCCCACAGGCAGGCAGCCTAATTGCTCCTGATGGCGCTCAGAGCTaGGTCCTCGTACACCTTGGA +
Preference number: 4 (lower is better)
Translates to: FSPLSLSPSPQAGSLIAPDGAQS*VLVHLG
Trigger: TCCAAGGTGTACGAGGACCCAGCTCTGAGCGCCATC...AGGAGCAATTAGGCTGCCTGCCTGTGGGCTGGGAGACAGGGACAATGGGGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp GGAATCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCAAGCTTGACTCCCGGCTaGAACACAGGTAGATTCTTC +
Preference number: 4 (lower is better)
Translates to: GIWMWAACKSDAAPGEAASLTPG*NTGRFF
Trigger: GAAGAATCTACCTGTGTTCCAGCCGGGAGTCAAGCT...TGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp GGGACACAGCTCCCGGAGGCGTGGAGACAGGTCTCTGTCCCAGAGGACTTCAAGAGCTTGACTCCCGGCTaGAACACAGGTAGATTCTTC +
Preference number: 4 (lower is better)
Translates to: GTQLPEAWRQVSVPEDFKSLTPG*NTGRFF
Trigger: GAAGAATCTACCTGTGTTCCAGCCGGGAGTCAAGCT...CTTGAAGTCCTCTGGGACAGAGACCTGTCTCCACGCCTCCGGGAGCTGTGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp TTTTCCCCATTGTCCCTGTCTCCCAGCCCACAGGCAGGCAGCCTAATTGCTCCTATGGTCTTCTGGGCCTaGCGAATCCTGTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: FSPLSLSPSPQAGSLIAPMVFWA*RILSLC
Trigger: GCAGAGGGACAGGATTCGCCAGGCCCAGAAGACCAT...AGGAGCAATTAGGCTGCCTGCCTGTGGGCTGGGAGACAGGGACAATGGGGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp CAGCCCAGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGCAGCTCCCGGAGGCGTaGAGACAGGTCTCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: QPRGKLTLVYLSNDTPVWQLPEA*RQVSVP
Trigger: TGGGACAGAGACCTGTCTCCACGCCTCCGGGAGCTG...CCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCTGGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp TTTTCCCCATTGTCCCTGTCTCCCAGCCCACAGGCAGGCAGCCTAATTGCTCCTTGGGAACACGGGCTGTaGGGAAAAAGCAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: FSPLSLSPSPQAGSLIAPWEHGL*GKSRSQ
Trigger: CTGGCTCCTGCTTTTTCCCCACAGCCCGTGTTCCCA...AGGAGCAATTAGGCTGCCTGCCTGTGGGCTGGGAGACAGGGACAATGGGGAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp GCAAGTGTGCCTCAAGGGTCAGTCTTCAATCTCGTCCTAAATAGGTGGGGCCCTTTGCTTTCCCATGGCTaGGGGCGGGCCATGACAGGG +
Preference number: 4 (lower is better)
Translates to: ASVPQGSVFNLVLNRWGPLLSHG*GRAMTG
Trigger: CCCTGTCATGGCCCGCCCCCAGCCATGGGAAAGCAA...AGGGCCCCACCTATTTAGGACGAGATTGAAGACTGACCCTTGAGGCACACTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp TTTTCCCCATTGTCCCTGTCTCCCAGCCCACAGGCAGGCAGCCTAATTGCTCCTAAGTTTGCTTTCCCATaGCTGGGGGCGGGCCATGAC +
Preference number: 4 (lower is better)
Translates to: FSPLSLSPSPQAGSLIAPKFAFP*LGAGHD
Trigger: GTCATGGCCCGCCCCCAGCCATGGGAAAGCAAACTT...AGGAGCAATTAGGCTGCCTGCCTGTGGGCTGGGAGACAGGGACAATGGGGAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp GGTGGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGAGGCCTTCCTTCAACTaGAGACAATTTGGGATGTTG +
Preference number: 4 (lower is better)
Translates to: GGAELLLRTPPAVCWTLGRPSFN*RQFGML
Trigger: CAACATCCCAAATTGTCTCCAGTTGAAGGAAGGCCT...CCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR CCA 90 bp TTTTCCCCATTGTCCCTGTCTCCCAGCCCACAGGCAGGCAGCCTAATTGCTCCTCAGAGCTGTAGCTGGTaGCCGAAGAGCTGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: FSPLSLSPSPQAGSLIAPQSCSW*PKSWSL
Trigger: GAGAGACCAGCTCTTCGGCCACCAGCTACAGCTCTG...AGGAGCAATTAGGCTGCCTGCCTGTGGGCTGGGAGACAGGGACAATGGGGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607838.5
3UTR CAA 72 bp CTCCGGGCCATTGAGCGCATAGGCTACAAGGTGACATaGCTGCTGAGTTACCTCGTCCTCCACTCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: LRAIERIGYKVT*LLSYLVLHSSL
Trigger: CAGGGAGGAGTGGAGGACGAGGTAACTCAGCAGCAATGTCACCTTGTAGCCTATGCGCTCAATGGCCCGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
3UTR CAA 72 bp CCATCACCCCTGGGCTCCAGTCTGCTACCCCCAGACTaGGCAGCTGGGATCTCTCCTTCCTGGTTCATAGTT +
Preference number: 4 (lower is better)
Translates to: PSPLGSSLLPPD*AAGISPSWFIV
Trigger: AACTATGAACCAGGAAGGAGAGATCCCAGCTGCCAAGTCTGGGGGTAGCAGACTGGAGCCCAGGGGTGATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR TCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAGGGGAATCATCGCTCTaGACCCCGCGGCTCCCACTC +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQAGESSL*TPRLPL
Trigger: GAGTGGGAGCCGCGGGGTTCAGAGCGATGATTCCCC...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335146.11
ENST00000405575.8
ENST00000589210.6
CDS-3UTR TCA 90 bp CAGCCCAGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGCGGAAATCATGCTCGTaGCCTGGCGAGATGTCGGCC +
Preference number: 4 (lower is better)
Translates to: QPRGKLTLVYLSNDTPVWRKSCS*PGEMSA
Trigger: GGCCGACATCTCGCCAGGTCACGAGCATGATTTCCG...CCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCTGGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335146.11
CDS-3UTR TCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAGGTGGTGCTCGGGGATaGTGTCGGCCAGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQAGGARG*CRPAAG
Trigger: ACCAGCTGCTGGCCGACATCATCCCCGAGCACCACC...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp AGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACGGTGGTGCTCGGGGATaGTGTCGGCCAGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: RGKLTLVYLSNDTPVWWNGGARG*CRPAAG
Trigger: ACCAGCTGCTGGCCGACATCATCCCCGAGCACCACC...GTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp CAGCCCAGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGGGATGGCATTGCTGGTaGGCTCGTGTACGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: QPRGKLTLVYLSNDTPVWGWHCW*ARVRCR
Trigger: ACGGCACCGTACACGAGCTCACCAGCAATGCCATCC...CCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCTGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp TCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCACCCCACTTCTCCAGGGACTTaGGGATGTAATTGTAGTTGT +
Preference number: 4 (lower is better)
Translates to: SGCGQRASLTQPLERLHPTSPGT*GCNCSC
Trigger: ACAACTACAATTACATCCTCAAGTCCCTGGAGAAGT...GGGGTGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp TTTCCCTGTATCTCTCCCCACAGAGCCCTCCAGAGGAGTAAAGGGGTCACAGAGCCCCGTAGGTCTCCTTaGCAATGGTCTTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: FPCISPHRALQRSKGVTEPRRSP*QWSSGP
Trigger: AGGCCCAGAAGACCATTGTCAAGGAGACCTACGGGG...CTCTGTGACCCCTTTACTCCTCTGGAGGGCTCTGTGGGGAGAGATACAGGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp TTTCCCTGTATCTCTCCCCACAGAGCCCTCCAGAGGAGTAAAGGGGTCACAGAGTCTCCGGGTTCTTGGTaGAGGGCACGCTGCCAAACT +
Preference number: 4 (lower is better)
Translates to: FPCISPHRALQRSKGVTESPGSW*RARCQT
Trigger: AGTTTGGCAGCGTGCCCTTCACCAAGAACCCGGAGA...CTCTGTGACCCCTTTACTCCTCTGGAGGGCTCTGTGGGGAGAGATACAGGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp GGCCTGAGACTGCTGACCGCATCTTCTTCCTCGTGTATGTGGTTGGGGTGCTGTGCTCCACCCCGTACTTaGTGTACTTCTCCGGGTTCT +
Preference number: 4 (lower is better)
Translates to: GLRLLTASSSSCMWLGCCAPPRT*CTSPGS
Trigger: AGAACCCGGAGAAGTACATCAAGTACGGGGTGGAGC...ACAGCACCCCAACCACATACACGAGGAAGAAGATGCGGTCAGCAGTCTCAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGAGGGAAAATGGCCAGTaGGCCTGCCTCCCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQRENGQ*ACLPQP
Trigger: TGGCTGGGGGAGGCAGGCTCACTGGCCATTTTCCCT...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp GGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGAAACACAAGCACAGAGCGTaGAATAAACCCATCTCCAGT +
Preference number: 4 (lower is better)
Translates to: GAELLLRTPPAVCWTLGKHKHRA*NKPISS
Trigger: ACTGGAGATGGGTTTATTTCACGCTCTGTGCTTGTG...TTTCCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp GGGACACAGCTCCCGGAGGCGTGGAGACAGGTCTCTGTCCCAGAGGACTTCAAGCACAAGCACAGAGCGTaGAATAAACCCATCTCCAGT +
Preference number: 4 (lower is better)
Translates to: GTQLPEAWRQVSVPEDFKHKHRA*NKPISS
Trigger: ACTGGAGATGGGTTTATTTCACGCTCTGTGCTTGTG...CTTGAAGTCCTCTGGGACAGAGACCTGTCTCCACGCCTCCGGGAGCTGTGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp AGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCCGCCGGGAAGGCCCTaGCTTTTCCCCTTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: RGKLTLVYLSNDTPVWWNPPGRP*LFPFQL
Trigger: CAGCTGGAAGGGGAAAAGTCAGGGCCTTCCCGGCGG...GTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR GCA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGCCGCCGTCGAGCGGATaGCTCCTGTGGGGGAATCAT +
Preference number: 4 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQPPSSG*LLWGNH
Trigger: ATGATTCCCCCACAGGAGGCATCCGCTCGACGGCGG...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000405575.8
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp CTCAGGGACACAGCTCCCGGAGGCGTGGAGACAGGTCTCTGTCCCAGAGGACTTTCTGAATCTTGGCCATaGTTCCCAGGTACTCTTCCA +
Preference number: 4 (lower is better)
Translates to: LRDTAPGGVETGLCPRGLSESWP*FPGTLP
Trigger: TGGAAGAGTACCTGGGAAGCATGGCCAAGATTCAGA...AAGTCCTCTGGGACAGAGACCTGTCTCCACGCCTCCGGGAGCTGTGTCCCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp GGAATCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCATCTGAATCTTGGCCATaGTTCCCAGGTACTCTTCCA +
Preference number: 4 (lower is better)
Translates to: GIWMWAACKSDAAPGEAASESWP*FPGTLP
Trigger: TGGAAGAGTACCTGGGAAGCATGGCCAAGATTCAGA...TGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp CAGCCCAGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGGCCGCGTCATCAGGCTaGGAAATTCGGACTCCAGGG +
Preference number: 4 (lower is better)
Translates to: QPRGKLTLVYLSNDTPVWAASSG*EIRTPG
Trigger: CCCTGGAGTCCGAATTTCGCAGCCTGATGACGCGGC...CCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCTGGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp TTTCCCTGTATCTCTCCCCACAGAGCCCTCCAGAGGAGTAAAGGGGTCACAGAGGAGACGACCTTACTGTaGCGCGTCATCAGGCTGCGA +
Preference number: 4 (lower is better)
Translates to: FPCISPHRALQRSKGVTEETTLL*RVIRLR
Trigger: TCGCAGCCTGATGACGCGGCACAGTAAGGTCGTCTC...CTCTGTGACCCCTTTACTCCTCTGGAGGGCTCTGTGGGGAGAGATACAGGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAACGCTCTCGGGCAGGTaGTCCAGGGTCACGTCCTCC +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQATLSGR*SRVTSS
Trigger: GGAGGACGTGACCCTGGAGCACCTGCCCGAGAGCGT...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp GGAATCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCACCCCAGAGGAAGAACTaGTCTTATGGAAATGCTCCT +
Preference number: 4 (lower is better)
Translates to: GIWMWAACKSDAAPGEAAPQRKN*SYGNAP
Trigger: AGGAGCATTTCCATAAGAGCAGTTCTTCCTCTGGGG...TGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp GGTGGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGTTCCCATCTAGACCATaGTGGGAATACTGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: GGAELLLRTPPAVCWTLGFPSRP*WEYCFR
Trigger: TCTGAAACAGTATTCCCAGCATGGTCTAGATGGGAA...CCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp TTTCCCTGTATCTCTCCCCACAGAGCCCTCCAGAGGAGTAAAGGGGTCACAGAGGTCTTCTTCTGGTGGTaGTCGGGGATGATGTCGGCC +
Preference number: 4 (lower is better)
Translates to: FPCISPHRALQRSKGVTEVFFWW*SGMMSA
Trigger: GGCCGACATCATCCCCGAGCACCACCAGAAGAAGAC...CTCTGTGACCCCTTTACTCCTCTGGAGGGCTCTGTGGGGAGAGATACAGGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp TGTGCACCCAATTCGTCTTTGCAGGAATCTGGATGTGGGCAGCGTGCAAGTCTGTTGTGCTGGCAGCCGTaGCCTGGAGCACCTGGTCAA +
Preference number: 4 (lower is better)
Translates to: CAPNSSLQESGCGQRASLLCWQP*PGAPGQ
Trigger: TTGACCAGGTGCTCCAGGGCACGGCTGCCAGCACAA...CAGACTTGCACGCTGCCCACATCCAGATTCCTGCAAAGACGAATTGGGTGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp AAAAGCCAAGGTGTGGAGGGACCCCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGAGGCCTTCTGGATTTTaGACAGTTCTTCGAGGCCAT +
Preference number: 4 (lower is better)
Translates to: KSQGVEGPQASGRVLVRLRPSGF*TVLRGH
Trigger: ATGGCCTCGAAGAACTGTGCAAAATCCAGAAGGCCT...CAGCCGAACCAGCACTCTCCCGGAAGCCTGGGGTCCCTCCACACCTTGGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp GGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGAAAAGGCCTTCTGGATTTTaGACAGTTCTTCGAGGCCAT +
Preference number: 4 (lower is better)
Translates to: GAELLLRTPPAVCWTLGKRPSGF*TVLRGH
Trigger: ATGGCCTCGAAGAACTGTGCAAAATCCAGAAGGCCT...TTTCCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp TGTGCACCCAATTCGTCTTTGCAGGAATCTGGATGTGGGCAGCGTGCAAGTCTGAGGCTTCCGGGAGAGTaGTGGTTCGGCTGGGAACAC +
Preference number: 4 (lower is better)
Translates to: CAPNSSLQESGCGQRASLRLPGE*WFGWEH
Trigger: GTGTTCCCAGCCGAACCAGCACTCTCCCGGAAGCCT...CAGACTTGCACGCTGCCCACATCCAGATTCCTGCAAAGACGAATTGGGTGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp TTTCCCTGTATCTCTCCCCACAGAGCCCTCCAGAGGAGTAAAGGGGTCACAGAGGCCCTTCTGCCCTGCTaGTCTTGGTACACATGGAGC +
Preference number: 4 (lower is better)
Translates to: FPCISPHRALQRSKGVTEALLPC*SWYTWS
Trigger: GCTCCATGTGTACCAAGAGCAGCAGGGCAGAAGGGC...CTCTGTGACCCCTTTACTCCTCTGGAGGGCTCTGTGGGGAGAGATACAGGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp TGTGCACCCAATTCGTCTTTGCAGGAATCTGGATGTGGGCAGCGTGCAAGTCTGGGGGTCAGTCCCGACTaGCTTTCCTCCAGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: CAPNSSLQESGCGQRASLGVSPD*LSSRSS
Trigger: AGAGCTCCTGGAGGAAAGGCAGTCGGGACTGACCCC...CAGACTTGCACGCTGCCCACATCCAGATTCCTGCAAAGACGAATTGGGTGCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp GCAAGTGTGCCTCAAGGGTCAGTCTTCAATCTCGTCCTAAATAGGTGGGGCCCTCCTCCGAACGCCTCCTaGAGTGTGCTGGACTCTAGG +
Preference number: 4 (lower is better)
Translates to: ASVPQGSVFNLVLNRWGPPPNAS*SVLDSR
Trigger: CCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGG...AGGGCCCCACCTATTTAGGACGAGATTGAAGACTGACCCTTGAGGCACACTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp GCAAGTGTGCCTCAAGGGTCAGTCTTCAATCTCGTCCTAAATAGGTGGGGCCCTTTCTGCAACCACGACTaGCTGGCCCTGGGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: ASVPQGSVFNLVLNRWGPFCNHD*LALGQE
Trigger: CTCTTGGCCCAGGGCCAGGCAGTCGTGGTTGCAGAA...AGGGCCCCACCTATTTAGGACGAGATTGAAGACTGACCCTTGAGGCACACTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp TTTTCCCCATTGTCCCTGTCTCCCAGCCCACAGGCAGGCAGCCTAATTGCTCCTCCTAATTGCTCCTTCTaGAACCACGACTGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: FSPLSLSPSPQAGSLIAPPNCSF*NHDCLA
Trigger: GGCCAGGCAGTCGTGGTTGCAGAAGGAGCAATTAGG...AGGAGCAATTAGGCTGCCTGCCTGTGGGCTGGGAGACAGGGACAATGGGGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp GCAAGTGTGCCTCAAGGGTCAGTCTTCAATCTCGTCCTAAATAGGTGGGGCCCTTGGATGTGGGCAGCGTaGAAGTCTGACGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: ASVPQGSVFNLVLNRWGPWMWAA*KSDAAP
Trigger: AGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCA...AGGGCCCCACCTATTTAGGACGAGATTGAAGACTGACCCTTGAGGCACACTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp GCAAGTGTGCCTCAAGGGTCAGTCTTCAATCTCGTCCTAAATAGGTGGGGCCCTTGGGTAGAGGCCCCTTaGATCCACCCTGCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: ASVPQGSVFNLVLNRWGPWVEAP*IHPAGS
Trigger: AGAGCCAGCAGGGTGGATGCAAGGGGCCTCTACCCA...AGGGCCCCACCTATTTAGGACGAGATTGAAGACTGACCCTTGAGGCACACTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR GCA 90 bp TTTTCCCCATTGTCCCTGTCTCCCAGCCCACAGGCAGGCAGCCTAATTGCTCCTTCATCGCTCTCTTGGTaGCTGCAGAGGCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: FSPLSLSPSPQAGSLIAPSSLSW*LQRHCC
Trigger: ACAGCAGTGCCTCTGCAGGCACCAAGAGAGCGATGA...AGGAGCAATTAGGCTGCCTGCCTGTGGGCTGGGAGACAGGGACAATGGGGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR GCA 90 bp AAAAGCCAAGGTGTGGAGGGACCCCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGTCCAAGTCTGTCCCTaGCAAAAGCCATCAAAAGTC +
Preference number: 4 (lower is better)
Translates to: KSQGVEGPQASGRVLVRLVQVCP*QKPSKV
Trigger: GACTTTTGATGGCTTTTGGCAGGGACAGACTTGGAC...CAGCCGAACCAGCACTCTCCCGGAAGCCTGGGGTCCCTCCACACCTTGGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR CCA 90 bp GGTGGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGGAAGAACTGCTCTTATaGAAATGCTCCTTCAGTCCT +
Preference number: 4 (lower is better)
Translates to: GGAELLLRTPPAVCWTLGEELLL*KCSFSP
Trigger: AGGACTGAAGGAGCATTTCCATAAGAGCAGTTCTTC...CCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGATGTCGGCCAGCAGCTaGTACTCGCTCTGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQMSASS*YSLCAS
Trigger: GCTGGCGCAGAGCGAGTACCAGCTGCTGGCCGACAT...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp TTTCCCTGTATCTCTCCCCACAGAGCCCTCCAGAGGAGTAAAGGGGTCACAGAGAGTCGTGTCGCACAATaGCCTTCCGGGCAGCAGACA +
Preference number: 4 (lower is better)
Translates to: FPCISPHRALQRSKGVTESRVAQ*PSGQQT
Trigger: TGTCTGCTGCCCGGAAGGCCATTGTGCGACACGACT...CTCTGTGACCCCTTTACTCCTCTGGAGGGCTCTGTGGGGAGAGATACAGGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp CAGCCCAGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGCTGGCAGCCGTGCCCTaGAGCACCTGGTCAAACTCA +
Preference number: 4 (lower is better)
Translates to: QPRGKLTLVYLSNDTPVWLAAVP*STWSNS
Trigger: TGAGTTTGACCAGGTGCTCCAGGGCACGGCTGCCAG...CCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCTGGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp TGTGCACCCAATTCGTCTTTGCAGGAATCTGGATGTGGGCAGCGTGCAAGTCTGCTGGCAGCCGTGCCCTaGAGCACCTGGTCAAACTCA +
Preference number: 4 (lower is better)
Translates to: CAPNSSLQESGCGQRASLLAAVP*STWSNS
Trigger: TGAGTTTGACCAGGTGCTCCAGGGCACGGCTGCCAG...CAGACTTGCACGCTGCCCACATCCAGATTCCTGCAAAGACGAATTGGGTGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp TTTCCCTGTATCTCTCCCCACAGAGCCCTCCAGAGGAGTAAAGGGGTCACAGAGAGTCCTCCAGCGCTTTaGCACCGATGGTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: FPCISPHRALQRSKGVTESPPAL*HRWSPW
Trigger: CCATGGAGACCATCGGTGCCAAAGCGCTGGAGGACT...CTCTGTGACCCCTTTACTCCTCTGGAGGGCTCTGTGGGGAGAGATACAGGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp CAGCCCAGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGGCGCCTGCCGTCTCCTaGAAGTCCAAAAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QPRGKLTLVYLSNDTPVWAPAVS*KSKSCC
Trigger: GCAGCAGCTTTTGGACTTCCAGGAGACGGCAGGCGC...CCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCTGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp TGTGCACCCAATTCGTCTTTGCAGGAATCTGGATGTGGGCAGCGTGCAAGTCTGGCGCCTGCCGTCTCCTaGAAGTCCAAAAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: CAPNSSLQESGCGQRASLAPAVS*KSKSCC
Trigger: GCAGCAGCTTTTGGACTTCCAGGAGACGGCAGGCGC...CAGACTTGCACGCTGCCCACATCCAGATTCCTGCAAAGACGAATTGGGTGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCACTTGGGAGGCCAGCATaGCGCCTGCCGTCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQALGRPA*RLPSPG
Trigger: TCCAGGAGACGGCAGGCGCCATGCTGGCCTCCCAAG...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp CAGCCCAGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGTGGCCGAAGAGCTaGTCTCTTGGGAGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: QPRGKLTLVYLSNDTPVWWWPKS*SLGRPA
Trigger: TGCTGGCCTCCCAAGAGACCAGCTCTTCGGCCACCA...CCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCTGGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
CDS-3UTR CCA 90 bp GCAAGTGTGCCTCAAGGGTCAGTCTTCAATCTCGTCCTAAATAGGTGGGGCCCTTGGTGGCCGAAGAGCTaGTCTCTTGGGAGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: ASVPQGSVFNLVLNRWGPWWPKS*SLGRPA
Trigger: TGCTGGCCTCCCAAGAGACCAGCTCTTCGGCCACCA...AGGGCCCCACCTATTTAGGACGAGATTGAAGACTGACCCTTGAGGCACACTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
CDS-3UTR CCA 90 bp GGCCTGAGACTGCTGACCGCATCTTCTTCCTCGTGTATGTGGTTGGGGTGCTGTCAGAGCTGTAGCTGGTaGCCGAAGAGCTGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: GLRLLTASSSSCMWLGCCQSCSW*PKSWSL
Trigger: AAGAGACCAGCTCTTCGGCCACCAGCTACAGCTCTG...ACAGCACCCCAACCACATACACGAGGAAGAAGATGCGGTCAGCAGTCTCAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
CDS-3UTR CCA 90 bp TTTTCCCCATTGTCCCTGTCTCCCAGCCCACAGGCAGGCAGCCTAATTGCTCCTCAGAGCTGTAGCTGGTaGCCGAAGAGCTGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: FSPLSLSPSPQAGSLIAPQSCSW*PKSWSL
Trigger: AAGAGACCAGCTCTTCGGCCACCAGCTACAGCTCTG...AGGAGCAATTAGGCTGCCTGCCTGTGGGCTGGGAGACAGGGACAATGGGGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
CDS-3UTR CCA 90 bp TTTTCCCCATTGTCCCTGTCTCCCAGCCCACAGGCAGGCAGCCTAATTGCTCCTAATGACACGCCAGTCTaGTGGAACCAGGCAGGGCTA +
Preference number: 4 (lower is better)
Translates to: FSPLSLSPSPQAGSLIAPNDTPV*WNQAGL
Trigger: TAGCCCTGCCTGGTTCCACCAGACTGGCGTGTCATT...AGGAGCAATTAGGCTGCCTGCCTGTGGGCTGGGAGACAGGGACAATGGGGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp CATGTTGAGGGGACCTTGAAGAACAGCTCCTTTCCCTGTATCTCTCCCCACAGACTTCCGGGAGAGTGCTaGTTCGGCTGGGAACACGGG +
Preference number: 4 (lower is better)
Translates to: HVEGTLKNSSFPCISPHRLPGEC*FGWEHG
Trigger: CCCGTGTTCCCAGCCGAACCAGCACTCTCCCGGAAG...TCTGTGGGGAGAGATACAGGGAAAGGAGCTGTTCTTCAAGGTCCCCTCAACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp TTTCCCTGTATCTCTCCCCACAGAGCCCTCCAGAGGAGTAAAGGGGTCACAGAGGCCCTGCCACATCTCTaGGCTGTAGGGGAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: FPCISPHRALQRSKGVTEALPHL*AVGEFS
Trigger: AGAGAACTCCCCTACAGCCCAGAGATGTGGCAGGGC...CTCTGTGACCCCTTTACTCCTCTGGAGGGCTCTGTGGGGAGAGATACAGGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp TGTGCACCCAATTCGTCTTTGCAGGAATCTGGATGTGGGCAGCGTGCAAGTCTGGGGTCACAGAGAAGCTaGCCTGAGACTGCTGACCGC +
Preference number: 4 (lower is better)
Translates to: CAPNSSLQESGCGQRASLGSQRS*PETADR
Trigger: GCGGTCAGCAGTCTCAGGCCAGCTTCTCTGTGACCC...CAGACTTGCACGCTGCCCACATCCAGATTCCTGCAAAGACGAATTGGGTGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp TGTGCACCCAATTCGTCTTTGCAGGAATCTGGATGTGGGCAGCGTGCAAGTCTGACGGAGGTCCAGGTGTaGGTAGAGGCCCCTTGCATC +
Preference number: 4 (lower is better)
Translates to: CAPNSSLQESGCGQRASLTEVQV*VEAPCI
Trigger: GATGCAAGGGGCCTCTACCCACACCTGGACCTCCGT...CAGACTTGCACGCTGCCCACATCCAGATTCCTGCAAAGACGAATTGGGTGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR CCA 90 bp AAGCCAAGGTGTGGAGGGACCCCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGTTGCAAAACAAGGTTTaGGAAGCCCTTCTATGGATC +
Preference number: 4 (lower is better)
Translates to: KPRCGGTPGFRESAGSAGLQNKV*EALLWI
Trigger: GATCCATAGAAGGGCTTCCCAAACCTTGTTTTGCAA...CCCAGCCGAACCAGCACTCTCCCGGAAGCCTGGGGTCCCTCCACACCTTGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR CCA 90 bp GCAAGTGTGCCTCAAGGGTCAGTCTTCAATCTCGTCCTAAATAGGTGGGGCCCTGTGTCCCCAAGAACTTaGGAGGCCAGCATGGCGCCT +
Preference number: 4 (lower is better)
Translates to: ASVPQGSVFNLVLNRWGPVSPRT*EASMAP
Trigger: AGGCGCCATGCTGGCCTCCCAAGTTCTTGGGGACAC...AGGGCCCCACCTATTTAGGACGAGATTGAAGACTGACCCTTGAGGCACACTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607838.5
CDS-3UTR TCA 90 bp CATGTTGAGGGGACCTTGAAGAACAGCTCCTTTCCCTGTATCTCTCCCCACAGAGCTCCTTCAGTCCTTTaGTGGAGCGGTCCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: HVEGTLKNSSFPCISPHRAPSVL*WSGPAG
Trigger: GCCAGCTGGACCGCTCCATCAAAGGACTGAAGGAGC...TCTGTGGGGAGAGATACAGGGAAAGGAGCTGTTCTTCAAGGTCCCCTCAACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCTCCTTCAGTCCTTTaGTGGAGCGGTCCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQAPSVL*WSGPAG
Trigger: GCCAGCTGGACCGCTCCATCAAAGGACTGAAGGAGC...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGGATGGGGAAGACGGTaGGCACCGTGGAGAAGTCGT +
Preference number: 4 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQGWGRR*APWRSR
Trigger: ACGACTTCTCCACGGTGCTCACCGTCTTCCCCATCC...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGCAGGCTTGGTCTGCTTaGGGTGTCGCAGGATGGGGA +
Preference number: 4 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQQAWSA*GVAGWG
Trigger: TCCCCATCCTGCGACACCTCAAGCAGACCAAGCCTG...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGGATGGCATTGCTGGTaGGCTCGTGTACGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQGWHCW*ARVRCR
Trigger: ACGGCACCGTACACGAGCTCACCAGCAATGCCATCC...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp GGCCTGAGACTGCTGACCGCATCTTCTTCCTCGTGTATGTGGTTGGGGTGCTGTCTCTTCCGCTCATGTTaGGGGGACCTTGAAGAACAG +
Preference number: 4 (lower is better)
Translates to: GLRLLTASSSSCMWLGCCLFRSC*GDLEEQ
Trigger: CTGTTCTTCAAGGTCCCCTCAACATGAGCGGAAGAG...ACAGCACCCCAACCACATACACGAGGAAGAAGATGCGGTCAGCAGTCTCAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp AAAAGCCAAGGTGTGGAGGGACCCCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGAATACGTAGTTTATaGTCTGAAGACCCAAGTCCC +
Preference number: 4 (lower is better)
Translates to: KSQGVEGPQASGRVLVRLGIRSL*SEDPSP
Trigger: GGGACTTGGGTCTTCAGATCATAAACTACGTATTCC...CAGCCGAACCAGCACTCTCCCGGAAGCCTGGGGTCCCTCCACACCTTGGCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR TCA 90 bp GGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGAAAGGAATACGTAGTTTATaGTCTGAAGACCCAAGTCCC +
Preference number: 4 (lower is better)
Translates to: GAELLLRTPPAVCWTLGKGIRSL*SEDPSP
Trigger: GGGACTTGGGTCTTCAGATCATAAACTACGTATTCC...TTTCCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR GCA 90 bp AGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCCGCCGTCGAGCGGATaGCTCCTGTGGGGGAATCAT +
Preference number: 4 (lower is better)
Translates to: RGKLTLVYLSNDTPVWWNPPSSG*LLWGNH
Trigger: ATGATTCCCCCACAGGAGGCATCCGCTCGACGGCGG...GTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCACCGCCGTCGAGCGGATaGCTCCTGTGGGGGAATCAT +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQAPPSSG*LLWGNH
Trigger: ATGATTCCCCCACAGGAGGCATCCGCTCGACGGCGG...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000405575.8
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp CAGCCCAGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGGAGACGACCTTACTGTaGCGCGTCATCAGGCTGCGA +
Preference number: 4 (lower is better)
Translates to: QPRGKLTLVYLSNDTPVWETTLL*RVIRLR
Trigger: TCGCAGCCTGATGACGCGGCACAGTAAGGTCGTCTC...CCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCTGGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp CAGCCCAGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGAGCTGGTACTCGCTCTaGGCCAGCTTGACGAAGGCA +
Preference number: 4 (lower is better)
Translates to: QPRGKLTLVYLSNDTPVWSWYSL*ASLTKA
Trigger: TGCCTTCGTCAAGCTGGCGCAGAGCGAGTACCAGCT...CCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCTGGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp GCAAGTGTGCCTCAAGGGTCAGTCTTCAATCTCGTCCTAAATAGGTGGGGCCCTAGCTGGTACTCGCTCTaGGCCAGCTTGACGAAGGCA +
Preference number: 4 (lower is better)
Translates to: ASVPQGSVFNLVLNRWGPSWYSL*ASLTKA
Trigger: TGCCTTCGTCAAGCTGGCGCAGAGCGAGTACCAGCT...AGGGCCCCACCTATTTAGGACGAGATTGAAGACTGACCCTTGAGGCACACTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp CAGCCCAGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGGTCTTCTTCTGGTGGTaGTCGGGGATGATGTCGGCC +
Preference number: 4 (lower is better)
Translates to: QPRGKLTLVYLSNDTPVWVFFWW*SGMMSA
Trigger: GGCCGACATCATCCCCGAGCACCACCAGAAGAAGAC...CCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCTGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGTTGTGCTGGCAGCCGTaGCCTGGAGCACCTGGTCAA +
Preference number: 4 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQLCWQP*PGAPGQ
Trigger: TTGACCAGGTGCTCCAGGGCACGGCTGCCAGCACAA...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp GCAAGTGTGCCTCAAGGGTCAGTCTTCAATCTCGTCCTAAATAGGTGGGGCCCTGCCCTTCTGCCCTGCTaGTCTTGGTACACATGGAGC +
Preference number: 4 (lower is better)
Translates to: ASVPQGSVFNLVLNRWGPALLPC*SWYTWS
Trigger: GCTCCATGTGTACCAAGAGCAGCAGGGCAGAAGGGC...AGGGCCCCACCTATTTAGGACGAGATTGAAGACTGACCCTTGAGGCACACTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGTCCAGGAGCTCTGGCTaGTTCTCTGAGCCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQSRSSG*FSEPCH
Trigger: GTGGCAGGGCTCAGAGAAGCAGCCAGAGCTCCTGGA...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGTTCTGCAACCACGACTaGCTGGCCCTGGGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQFCNHD*LALGQE
Trigger: CTCTTGGCCCAGGGCCAGGCAGTCGTGGTTGCAGAA...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AAAAGCCAAGGTGTGGAGGGACCCCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGACGTTCATGAAATCTTaGTTGCGGCCATATTCCACC +
Preference number: 4 (lower is better)
Translates to: KSQGVEGPQASGRVLVRLTFMKS*LRPYST
Trigger: GGTGGAATATGGCCGCAACCAAGATTTCATGAACGT...CAGCCGAACCAGCACTCTCCCGGAAGCCTGGGGTCCCTCCACACCTTGGCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp CTCAGGGACACAGCTCCCGGAGGCGTGGAGACAGGTCTCTGTCCCAGAGGACTTCCATCTAGACCATGCTaGGAATACTGTTTCAGAAGG +
Preference number: 4 (lower is better)
Translates to: LRDTAPGGVETGLCPRGLPSRPC*EYCFRR
Trigger: CCTTCTGAAACAGTATTCCCAGCATGGTCTAGATGG...AAGTCCTCTGGGACAGAGACCTGTCTCCACGCCTCCGGGAGCTGTGTCCCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp TGTGCACCCAATTCGTCTTTGCAGGAATCTGGATGTGGGCAGCGTGCAAGTCTGATCATGCTCGTGACCTaGCGAGATGTCGGCCGCACA +
Preference number: 4 (lower is better)
Translates to: CAPNSSLQESGCGQRASLIMLVT*RDVGRT
Trigger: TGTGCGGCCGACATCTCGCCAGGTCACGAGCATGAT...CAGACTTGCACGCTGCCCACATCCAGATTCCTGCAAAGACGAATTGGGTGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335146.11
CDS-3UTR CCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAATGTCGGCCAGCAGCTaGTACTCGCTCTGCGCCAGC +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQAMSASS*YSLCAS
Trigger: GCTGGCGCAGAGCGAGTACCAGCTGCTGGCCGACAT...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp GGCCTGAGACTGCTGACCGCATCTTCTTCCTCGTGTATGTGGTTGGGGTGCTGTAAGGTCTTCTTCTGGTaGTGCTCGGGGATGATGTCG +
Preference number: 4 (lower is better)
Translates to: GLRLLTASSSSCMWLGCCKVFFW*CSGMMS
Trigger: CGACATCATCCCCGAGCACCACCAGAAGAAGACCTT...ACAGCACCCCAACCACATACACGAGGAAGAAGATGCGGTCAGCAGTCTCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp GGCCTGAGACTGCTGACCGCATCTTCTTCCTCGTGTATGTGGTTGGGGTGCTGTTCGAAGGTCTTCTTCTaGTGGTGCTCGGGGATGATG +
Preference number: 4 (lower is better)
Translates to: GLRLLTASSSSCMWLGCCSKVFF*WCSGMM
Trigger: CATCATCCCCGAGCACCACCAGAAGAAGACCTTCGA...ACAGCACCCCAACCACATACACGAGGAAGAAGATGCGGTCAGCAGTCTCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGCTGGCAGCCGTGCCCTaGAGCACCTGGTCAAACTCA +
Preference number: 4 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQLAAVP*STWSNS
Trigger: TGAGTTTGACCAGGTGCTCCAGGGCACGGCTGCCAG...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGTGGTGGCCGAAGAGCTaGTCTCTTGGGAGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQWWPKS*SLGRPA
Trigger: TGCTGGCCTCCCAAGAGACCAGCTCTTCGGCCACCA...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000405575.8
ENST00000589210.6
CDS-3UTR CCA 90 bp CAGCCCAGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGGAACACGGGCTGTaGGGAAAAAGCAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: QPRGKLTLVYLSNDTPVWWEHGL*GKSRSQ
Trigger: CTGGCTCCTGCTTTTTCCCCACAGCCCGTGTTCCCA...CCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCTGGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp TTTCCCTGTATCTCTCCCCACAGAGCCCTCCAGAGGAGTAAAGGGGTCACAGAGATAAAAGCCAAGGTGTaGAGGGACCCCAGGCTTCCG +
Preference number: 4 (lower is better)
Translates to: FPCISPHRALQRSKGVTEIKAKV*RDPRLP
Trigger: CGGAAGCCTGGGGTCCCTCCACACCTTGGCTTTTAT...CTCTGTGACCCCTTTACTCCTCTGGAGGGCTCTGTGGGGAGAGATACAGGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp TGTGCACCCAATTCGTCTTTGCAGGAATCTGGATGTGGGCAGCGTGCAAGTCTGGCCCTGCCACATCTCTaGGCTGTAGGGGAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: CAPNSSLQESGCGQRASLALPHL*AVGEFS
Trigger: AGAGAACTCCCCTACAGCCCAGAGATGTGGCAGGGC...CAGACTTGCACGCTGCCCACATCCAGATTCCTGCAAAGACGAATTGGGTGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp TTTCCCTGTATCTCTCCCCACAGAGCCCTCCAGAGGAGTAAAGGGGTCACAGAGCCTCCTGCAGTGTGCTaGACTCTAGGGAAAATGGCC +
Preference number: 4 (lower is better)
Translates to: FPCISPHRALQRSKGVTEPPAVC*TLGKMA
Trigger: GGCCATTTTCCCTAGAGTCCAGCACACTGCAGGAGG...CTCTGTGACCCCTTTACTCCTCTGGAGGGCTCTGTGGGGAGAGATACAGGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp TTTCCCTGTATCTCTCCCCACAGAGCCCTCCAGAGGAGTAAAGGGGTCACAGAGGCAGGAATCTGGATGTaGGCAGCGTGCAAGTCTGAC +
Preference number: 4 (lower is better)
Translates to: FPCISPHRALQRSKGVTEAGIWM*AACKSD
Trigger: GTCAGACTTGCACGCTGCCCACATCCAGATTCCTGC...CTCTGTGACCCCTTTACTCCTCTGGAGGGCTCTGTGGGGAGAGATACAGGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp TTTCCCTGTATCTCTCCCCACAGAGCCCTCCAGAGGAGTAAAGGGGTCACAGAGTCTTCCTCGTGTATGTaGTTGGGGTGCTGTGCACCC +
Preference number: 4 (lower is better)
Translates to: FPCISPHRALQRSKGVTESSSCM*LGCCAP
Trigger: GGGTGCACAGCACCCCAACCACATACACGAGGAAGA...CTCTGTGACCCCTTTACTCCTCTGGAGGGCTCTGTGGGGAGAGATACAGGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAAGAGTCTCCTCCTCCTaGGGGCAGGCAAGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQARVSSS*GQARGG
Trigger: TCCTCCCCTTGCCTGCCCCCAGGAGGAGGAGACTCT...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467929.6
CDS-3UTR CCA 90 bp CAGCCCAGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGCAGAGCTGTAGCTGGTaGCCGAAGAGCTGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: QPRGKLTLVYLSNDTPVWQSCSW*PKSWSL
Trigger: GAGAGACCAGCTCTTCGGCCACCAGCTACAGCTCTG...CCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCTGGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467929.6
ENST00000607838.5
CDS-3UTR TCA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGAGCGGGAGATGCGAATaGCATCCTGGAGCACGCTCT +
Preference number: 4 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQSGRCE*HPGARS
Trigger: AGAGCGTGCTCCAGGATGTCATTCGCATCTCCCGCT...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAGCTCCTTCAGTCCTTTaGTGGAGCGGTCCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQAAPSVL*WSGPAG
Trigger: GCCAGCTGGACCGCTCCATCAAAGGACTGAAGGAGC...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp AGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACGCTCCTTCAGTCCTTTaGTGGAGCGGTCCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: RGKLTLVYLSNDTPVWWNAPSVL*WSGPAG
Trigger: GCCAGCTGGACCGCTCCATCAAAGGACTGAAGGAGC...GTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAGGATGGGGAAGACGGTaGGCACCGTGGAGAAGTCGT +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQAGWGRR*APWRSR
Trigger: ACGACTTCTCCACGGTGCTCACCGTCTTCCCCATCC...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCACAGGCTTGGTCTGCTTaGGGTGTCGCAGGATGGGGA +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQAQAWSA*GVAGWG
Trigger: TCCCCATCCTGCGACACCTCAAGCAGACCAAGCCTG...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAGGATGGCATTGCTGGTaGGCTCGTGTACGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQAGWHCW*ARVRCR
Trigger: ACGGCACCGTACACGAGCTCACCAGCAATGCCATCC...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp CTTCGGCATGTTGTACTCCTTGTCCGGGTCATTCTTGATGTTGTCTGCGAAGTCGGATGGCATTGCTGGTaGGCTCGTGTACGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: LRHVVLLVRVILDVVCEVGWHCW*ARVRCR
Trigger: ACGGCACCGTACACGAGCTCACCAGCAATGCCATCC...GACTTCGCAGACAACATCAAGAATGACCCGGACAAGGAGTACAACATGCCGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592559.1
CDS-3UTR TCA 90 bp TGTGCACCCAATTCGTCTTTGCAGGAATCTGGATGTGGGCAGCGTGCAAGTCTGGCTCCACCCCGTACTTaGTGTACTTCTCCGGGTTCT +
Preference number: 4 (lower is better)
Translates to: CAPNSSLQESGCGQRASLAPPRT*CTSPGS
Trigger: AGAACCCGGAGAAGTACATCAAGTACGGGGTGGAGC...CAGACTTGCACGCTGCCCACATCCAGATTCCTGCAAAGACGAATTGGGTGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp CAGCCCAGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTTCTCCTGCAGCCGCTaGAGATTCTCCGTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: QPRGKLTLVYLSNDTPVWFSCSR*RFSVCL
Trigger: CAAGCAGACGGAGAATCTGCAGCGGCTGCAGGAGAA...CCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCTGGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp TGTGCACCCAATTCGTCTTTGCAGGAATCTGGATGTGGGCAGCGTGCAAGTCTGTTCTCCTGCAGCCGCTaGAGATTCTCCGTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: CAPNSSLQESGCGQRASLFSCSR*RFSVCL
Trigger: CAAGCAGACGGAGAATCTGCAGCGGCTGCAGGAGAA...CAGACTTGCACGCTGCCCACATCCAGATTCCTGCAAAGACGAATTGGGTGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp TTTTCCCCATTGTCCCTGTCTCCCAGCCCACAGGCAGGCAGCCTAATTGCTCCTTTCTCAACATTCTCCTaGAGCCGCTGCAGATTCTCC +
Preference number: 4 (lower is better)
Translates to: FSPLSLSPSPQAGSLIAPFSTFS*SRCRFS
Trigger: GGAGAATCTGCAGCGGCTGCAGGAGAATGTTGAGAA...AGGAGCAATTAGGCTGCCTGCCTGTGGGCTGGGAGACAGGGACAATGGGGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAGCCGCGTCATCAGGCTaGGAAATTCGGACTCCAGGG +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQAAASSG*EIRTPG
Trigger: CCCTGGAGTCCGAATTTCGCAGCCTGATGACGCGGC...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp AGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACGCCGCGTCATCAGGCTaGGAAATTCGGACTCCAGGG +
Preference number: 4 (lower is better)
Translates to: RGKLTLVYLSNDTPVWWNAASSG*EIRTPG
Trigger: CCCTGGAGTCCGAATTTCGCAGCCTGATGACGCGGC...GTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGAGACGACCTTACTGTaGCGCGTCATCAGGCTGCGA +
Preference number: 4 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQETTLL*RVIRLR
Trigger: TCGCAGCCTGATGACGCGGCACAGTAAGGTCGTCTC...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp GGAATCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCACTGCTCTTATGGAAATaGTCCTTCAGTCCTTTGATG +
Preference number: 4 (lower is better)
Translates to: GIWMWAACKSDAAPGEAALLLWK*SFSPLM
Trigger: CATCAAAGGACTGAAGGAGCATTTCCATAAGAGCAG...TGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp CTCAGGGACACAGCTCCCGGAGGCGTGGAGACAGGTCTCTGTCCCAGAGGACTTCTGCTCTTATGGAAATaGTCCTTCAGTCCTTTGATG +
Preference number: 4 (lower is better)
Translates to: LRDTAPGGVETGLCPRGLLLLWK*SFSPLM
Trigger: CATCAAAGGACTGAAGGAGCATTTCCATAAGAGCAG...AAGTCCTCTGGGACAGAGACCTGTCTCCACGCCTCCGGGAGCTGTGTCCCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGAGCTGGTACTCGCTCTaGGCCAGCTTGACGAAGGCA +
Preference number: 4 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQSWYSL*ASLTKA
Trigger: TGCCTTCGTCAAGCTGGCGCAGAGCGAGTACCAGCT...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGTCTTCTTCTGGTGGTaGTCGGGGATGATGTCGGCC +
Preference number: 4 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQVFFWW*SGMMSA
Trigger: GGCCGACATCATCCCCGAGCACCACCAGAAGAAGAC...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCATTGTGCTGGCAGCCGTaGCCTGGAGCACCTGGTCAA +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQALCWQP*PGAPGQ
Trigger: TTGACCAGGTGCTCCAGGGCACGGCTGCCAGCACAA...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGCGCTCCTTGATAATCTaGCGCTCCTTGTCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQRSLII*RSLSRS
Trigger: GCTCCGGGACAAGGAGCGGCAGATTATCAAGGAGCG...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAAGGCTTCCGGGAGAGTaGTGGTTCGGCTGGGAACAC +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQARLPGE*WFGWEH
Trigger: GTGTTCCCAGCCGAACCAGCACTCTCCCGGAAGCCT...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCCCTTCTGCCCTGCTaGTCTTGGTACACATGGAGC +
Preference number: 4 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQALLPC*SWYTWS
Trigger: GCTCCATGTGTACCAAGAGCAGCAGGGCAGAAGGGC...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCATCCAGGAGCTCTGGCTaGTTCTCTGAGCCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQASRSSG*FSEPCH
Trigger: GTGGCAGGGCTCAGAGAAGCAGCCAGAGCTCCTGGA...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp GCAAGTGTGCCTCAAGGGTCAGTCTTCAATCTCGTCCTAAATAGGTGGGGCCCTCATCTCCCTGTGCCCTaGCTCCCCCAGTTTACTACT +
Preference number: 4 (lower is better)
Translates to: ASVPQGSVFNLVLNRWGPHLPVP*LPQFTT
Trigger: AGTAGTAAACTGGGGGAGGCAGGGCACAGGGAGATG...AGGGCCCCACCTATTTAGGACGAGATTGAAGACTGACCCTTGAGGCACACTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR GCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAGCTAAAGGAGACCACTaGGTCCCAACCCCACGGCCT +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQAAKGDH*VPTPRP
Trigger: AGGCCGTGGGGTTGGGACGCAGTGGTCTCCTTTAGC...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467929.6
CDS-3UTR CCA 90 bp CAGCCCAGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGAGCGGATGCCTCCTGTaGGGGAATCATCGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: QPRGKLTLVYLSNDTPVWSGCLL*GNHRSE
Trigger: TTCAGAGCGATGATTCCCCCACAGGAGGCATCCGCT...CCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCTGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335146.11
ENST00000589210.6
CDS-3UTR CCA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGATGCGAATGACATCCTaGAGCACGCTCTCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQMRMTS*STLSGR
Trigger: CCTGCCCGAGAGCGTGCTCCAGGATGTCATTCGCAT...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp CATGTTGAGGGGACCTTGAAGAACAGCTCCTTTCCCTGTATCTCTCCCCACAGAATGCGAATGACATCCTaGAGCACGCTCTCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: HVEGTLKNSSFPCISPHRMRMTS*STLSGR
Trigger: CCTGCCCGAGAGCGTGCTCCAGGATGTCATTCGCAT...TCTGTGGGGAGAGATACAGGGAAAGGAGCTGTTCTTCAAGGTCCCCTCAACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp CCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGAACACGGGCTGTGGGGAAAAAGAAGAACTGCTCTTATaGAAATGCTCCTTCAGTCCT +
Preference number: 4 (lower is better)
Translates to: PGFRESAGSAGNTGCGEKEELLL*KCSFSP
Trigger: AGGACTGAAGGAGCATTTCCATAAGAGCAGTTCTTC...TTTTTCCCCACAGCCCGTGTTCCCAGCCGAACCAGCACTCTCCCGGAAGCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGCCCTGGCCGCTTGACTaGCTTCTTGGTAGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQPWPLD*LLGRCV
Trigger: GACACACCTACCAAGAAGCCAGTCAAGCGGCCAGGG...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp GCAAGTGTGCCTCAAGGGTCAGTCTTCAATCTCGTCCTAAATAGGTGGGGCCCTCTTACGGATCGTCCCTaGCCGCTTGACTGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: ASVPQGSVFNLVLNRWGPLTDRP*PLDWLL
Trigger: AAGAAGCCAGTCAAGCGGCCAGGGACGATCCGTAAG...AGGGCCCCACCTATTTAGGACGAGATTGAAGACTGACCCTTGAGGCACACTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGAGTCGTGTCGCACAATaGCCTTCCGGGCAGCAGACA +
Preference number: 4 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQSRVAQ*PSGQQT
Trigger: TGTCTGCTGCCCGGAAGGCCATTGTGCGACACGACT...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp CATGTTGAGGGGACCTTGAAGAACAGCTCCTTTCCCTGTATCTCTCCCCACAGAAGTCGTGTCGCACAATaGCCTTCCGGGCAGCAGACA +
Preference number: 4 (lower is better)
Translates to: HVEGTLKNSSFPCISPHRSRVAQ*PSGQQT
Trigger: TGTCTGCTGCCCGGAAGGCCATTGTGCGACACGACT...TCTGTGGGGAGAGATACAGGGAAAGGAGCTGTTCTTCAAGGTCCCCTCAACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCACTGGCAGCCGTGCCCTaGAGCACCTGGTCAAACTCA +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQALAAVP*STWSNS
Trigger: TGAGTTTGACCAGGTGCTCCAGGGCACGGCTGCCAG...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCTGGCAGCCGTGCCCTaGAGCACCTGGTCAAACTCA +
Preference number: 4 (lower is better)
Translates to: RGKLTLVYLSNDTPVWWNLAAVP*STWSNS
Trigger: TGAGTTTGACCAGGTGCTCCAGGGCACGGCTGCCAG...GTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGAGTCCTCCAGCGCTTTaGCACCGATGGTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQSPPAL*HRWSPW
Trigger: CCATGGAGACCATCGGTGCCAAAGCGCTGGAGGACT...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACGCGCCTGCCGTCTCCTaGAAGTCCAAAAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RGKLTLVYLSNDTPVWWNAPAVS*KSKSCC
Trigger: GCAGCAGCTTTTGGACTTCCAGGAGACGGCAGGCGC...GTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAGCGCCTGCCGTCTCCTaGAAGTCCAAAAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQAAPAVS*KSKSCC
Trigger: GCAGCAGCTTTTGGACTTCCAGGAGACGGCAGGCGC...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp CTTCGGCATGTTGTACTCCTTGTCCGGGTCATTCTTGATGTTGTCTGCGAAGTCGCGCCTGCCGTCTCCTaGAAGTCCAAAAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LRHVVLLVRVILDVVCEVAPAVS*KSKSCC
Trigger: GCAGCAGCTTTTGGACTTCCAGGAGACGGCAGGCGC...GACTTCGCAGACAACATCAAGAATGACCCGGACAAGGAGTACAACATGCCGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592559.1
CDS-3UTR CCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAGAAGAGCTGGTCTCTTaGGAGGCCAGCATGGCGCCT +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQAEELVS*EASMAP
Trigger: AGGCGCCATGCTGGCCTCCCAAGAGACCAGCTCTTC...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000405575.8
ENST00000589210.6
CDS-3UTR CCA 90 bp TGTGCACCCAATTCGTCTTTGCAGGAATCTGGATGTGGGCAGCGTGCAAGTCTGACTCAGAGCTGTAGCTaGTGGCCGAAGAGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: CAPNSSLQESGCGQRASLTQSCS*WPKSWS
Trigger: AGACCAGCTCTTCGGCCACCAGCTACAGCTCTGAGT...CAGACTTGCACGCTGCCCACATCCAGATTCCTGCAAAGACGAATTGGGTGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp CAGCCCAGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGACTCAGAGCTGTAGCTaGTGGCCGAAGAGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: QPRGKLTLVYLSNDTPVWTQSCS*WPKSWS
Trigger: AGACCAGCTCTTCGGCCACCAGCTACAGCTCTGAGT...CCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCTGGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGATGGCGCTCAGAGCTaGGTCCTCGTACACCTTGGA +
Preference number: 4 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQDGAQS*VLVHLG
Trigger: TCCAAGGTGTACGAGGACCCAGCTCTGAGCGCCATC...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp TTTTCCCCATTGTCCCTGTCTCCCAGCCCACAGGCAGGCAGCCTAATTGCTCCTAGCTTGACTCCCGGCTaGAACACAGGTAGATTCTTC +
Preference number: 4 (lower is better)
Translates to: FSPLSLSPSPQAGSLIAPSLTPG*NTGRFF
Trigger: GAAGAATCTACCTGTGTTCCAGCCGGGAGTCAAGCT...AGGAGCAATTAGGCTGCCTGCCTGTGGGCTGGGAGACAGGGACAATGGGGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGATGGTCTTCTGGGCCTaGCGAATCCTGTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQMVFWA*RILSLC
Trigger: GCAGAGGGACAGGATTCGCCAGGCCCAGAAGACCAT...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp TGTGCACCCAATTCGTCTTTGCAGGAATCTGGATGTGGGCAGCGTGCAAGTCTGAATGACACGCCAGTCTaGTGGAACCAGGCAGGGCTA +
Preference number: 4 (lower is better)
Translates to: CAPNSSLQESGCGQRASLNDTPV*WNQAGL
Trigger: TAGCCCTGCCTGGTTCCACCAGACTGGCGTGTCATT...CAGACTTGCACGCTGCCCACATCCAGATTCCTGCAAAGACGAATTGGGTGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp GCAAGTGTGCCTCAAGGGTCAGTCTTCAATCTCGTCCTAAATAGGTGGGGCCCTCTGCCCTGCTGCTCTTaGTACACATGGAGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: ASVPQGSVFNLVLNRWGPLPCCS*YTWSSS
Trigger: ACTGCTGCTCCATGTGTACCAAGAGCAGCAGGGCAG...AGGGCCCCACCTATTTAGGACGAGATTGAAGACTGACCCTTGAGGCACACTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp CAGCCCAGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGCTGCCCTGCTGCTCTTaGTACACATGGAGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: QPRGKLTLVYLSNDTPVWLPCCS*YTWSSS
Trigger: ACTGCTGCTCCATGTGTACCAAGAGCAGCAGGGCAG...CCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCTGGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp CATGTTGAGGGGACCTTGAAGAACAGCTCCTTTCCCTGTATCTCTCCCCACAGAAAGTTTGCTTTCCCATaGCTGGGGGCGGGCCATGAC +
Preference number: 4 (lower is better)
Translates to: HVEGTLKNSSFPCISPHRKFAFP*LGAGHD
Trigger: GTCATGGCCCGCCCCCAGCCATGGGAAAGCAAACTT...TCTGTGGGGAGAGATACAGGGAAAGGAGCTGTTCTTCAAGGTCCCCTCAACATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGAAGTTTGCTTTCCCATaGCTGGGGGCGGGCCATGAC +
Preference number: 4 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQKFAFP*LGAGHD
Trigger: GTCATGGCCCGCCCCCAGCCATGGGAAAGCAAACTT...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp GCAAGTGTGCCTCAAGGGTCAGTCTTCAATCTCGTCCTAAATAGGTGGGGCCCTGCAGGAATCTGGATGTaGGCAGCGTGCAAGTCTGAC +
Preference number: 4 (lower is better)
Translates to: ASVPQGSVFNLVLNRWGPAGIWM*AACKSD
Trigger: GTCAGACTTGCACGCTGCCCACATCCAGATTCCTGC...AGGGCCCCACCTATTTAGGACGAGATTGAAGACTGACCCTTGAGGCACACTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp TTTCCCTGTATCTCTCCCCACAGAGCCCTCCAGAGGAGTAAAGGGGTCACAGAGGTCTTTGCAGGAATCTaGATGTGGGCAGCGTGCAAG +
Preference number: 4 (lower is better)
Translates to: FPCISPHRALQRSKGVTEVFAGI*MWAACK
Trigger: CTTGCACGCTGCCCACATCCAGATTCCTGCAAAGAC...CTCTGTGACCCCTTTACTCCTCTGGAGGGCTCTGTGGGGAGAGATACAGGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp TGTGCACCCAATTCGTCTTTGCAGGAATCTGGATGTGGGCAGCGTGCAAGTCTGTCTTCCTCGTGTATGTaGTTGGGGTGCTGTGCACCC +
Preference number: 4 (lower is better)
Translates to: CAPNSSLQESGCGQRASLSSSCM*LGCCAP
Trigger: GGGTGCACAGCACCCCAACCACATACACGAGGAAGA...CAGACTTGCACGCTGCCCACATCCAGATTCCTGCAAAGACGAATTGGGTGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACGGGTCACAGAGAAGCTaGCCTGAGACTGCTGACCGC +
Preference number: 4 (lower is better)
Translates to: RGKLTLVYLSNDTPVWWNGSQRS*PETADR
Trigger: GCGGTCAGCAGTCTCAGGCCAGCTTCTCTGTGACCC...GTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCACCCAGCACTTTACCTTaGGAGGCCAGCATGGCGCCT +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQAPSTLP*EASMAP
Trigger: AGGCGCCATGCTGGCCTCCCAAGGTAAAGTGCTGGG...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357231.8
CDS-3UTR CCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAGTGTCCCCAAGAACTTaGGAGGCCAGCATGGCGCCT +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQAVSPRT*EASMAP
Trigger: AGGCGCCATGCTGGCCTCCCAAGTTCTTGGGGACAC...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467929.6
ENST00000607838.5
3UTR CAA 72 bp TCGTGTACGGTGCCGTCCTTCGGCATGTTGTACTCCTaGTCCGGGTCATTCTTGATGTTGTCTGCGAAGTCC +
Preference number: 4 (lower is better)
Translates to: SCTVPSFGMLYS*SGSFLMLSAKS
Trigger: GGACTTCGCAGACAACATCAAGAATGACCCGGACAAGGAGTACAACATGCCGAAGGACGGCACCGTACACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592559.1
3UTR CAA 72 bp CTGGTGAGCTCGTGTACGGTGCCGTCCTTCGGCATGTaGTACTCCTTGTCCGGGTCATTCTTGATGTTGTCT +
Preference number: 4 (lower is better)
Translates to: LVSSCTVPSFGM*YSLSGSFLMLS
Trigger: AGACAACATCAAGAATGACCCGGACAAGGAGTACAACATGCCGAAGGACGGCACCGTACACGAGCTCACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592559.1
CDS-3UTR TCA 90 bp GTGCTATATCCTTCTGTGTATTCTACTGCATACATCCTCAAGCTGGCTCCATGTGGGGAATCATCGCTCTaGACCCCGCGGCTCCCACTC +
Preference number: 4 (lower is better)
Translates to: VLYPSVYSTAYILKLAPCGESSL*TPRLPL
Trigger: GAGTGGGAGCCGCGGGGTTCAGAGCGATGATTCCCC...ACATGGAGCCAGCTTGAGGATGTATGCAGTAGAATACACAGAAGGATATAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406660.4
CDS-3UTR TCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAAGCGGGAGATGCGAATaGCATCCTGGAGCACGCTCT +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQASGRCE*HPGARS
Trigger: AGAGCGTGCTCCAGGATGTCATTCGCATCTCCCGCT...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp TTTCCCTGTATCTCTCCCCACAGAGCCCTCCAGAGGAGTAAAGGGGTCACAGAGTGTTTCAGAAGGTTCTaGGCCTTACGGATCGTCCCT +
Preference number: 4 (lower is better)
Translates to: FPCISPHRALQRSKGVTECFRRF*ALRIVP
Trigger: AGGGACGATCCGTAAGGCTCAGAACCTTCTGAAACA...CTCTGTGACCCCTTTACTCCTCTGGAGGGCTCTGTGGGGAGAGATACAGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCACCCCGTAGGTCTCCTTaGCAATGGTCTTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQAPRRSP*QWSSGP
Trigger: AGGCCCAGAAGACCATTGTCAAGGAGACCTACGGGG...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCATCTCCGGGTTCTTGGTaGAGGGCACGCTGCCAAACT +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQASPGSW*RARCQT
Trigger: AGTTTGGCAGCGTGCCCTTCACCAAGAACCCGGAGA...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp AGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACTCTCCGGGTTCTTGGTaGAGGGCACGCTGCCAAACT +
Preference number: 4 (lower is better)
Translates to: RGKLTLVYLSNDTPVWWNSPGSW*RARCQT
Trigger: AGTTTGGCAGCGTGCCCTTCACCAAGAACCCGGAGA...GTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCATGGATTAAGCCACCCTaGGCTCTCCCTCCGCTAGCA +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQAWIKPP*ALPPLA
Trigger: TGCTAGCGGAGGGAGAGCTCAGGGTGGCTTAATCCA...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp TGTGCACCCAATTCGTCTTTGCAGGAATCTGGATGTGGGCAGCGTGCAAGTCTGCTCTTCCGCTCATGTTaGGGGGACCTTGAAGAACAG +
Preference number: 4 (lower is better)
Translates to: CAPNSSLQESGCGQRASLLFRSC*GDLEEQ
Trigger: CTGTTCTTCAAGGTCCCCTCAACATGAGCGGAAGAG...CAGACTTGCACGCTGCCCACATCCAGATTCCTGCAAAGACGAATTGGGTGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp CATGTTGAGGGGACCTTGAAGAACAGCTCCTTTCCCTGTATCTCTCCCCACAGATTCTCCTGCAGCCGCTaGAGATTCTCCGTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: HVEGTLKNSSFPCISPHRFSCSR*RFSVCL
Trigger: CAAGCAGACGGAGAATCTGCAGCGGCTGCAGGAGAA...TCTGTGGGGAGAGATACAGGGAAAGGAGCTGTTCTTCAAGGTCCCCTCAACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGTTCTCCTGCAGCCGCTaGAGATTCTCCGTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQFSCSR*RFSVCL
Trigger: CAAGCAGACGGAGAATCTGCAGCGGCTGCAGGAGAA...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp TTTCCCTGTATCTCTCCCCACAGAGCCCTCCAGAGGAGTAAAGGGGTCACAGAGTTCTCAACATTCTCCTaGAGCCGCTGCAGATTCTCC +
Preference number: 4 (lower is better)
Translates to: FPCISPHRALQRSKGVTEFSTFS*SRCRFS
Trigger: GGAGAATCTGCAGCGGCTGCAGGAGAATGTTGAGAA...CTCTGTGACCCCTTTACTCCTCTGGAGGGCTCTGTGGGGAGAGATACAGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp GGCCTGAGACTGCTGACCGCATCTTCTTCCTCGTGTATGTGGTTGGGGTGCTGTTCTGAATCTTGGCCATaGTTCCCAGGTACTCTTCCA +
Preference number: 4 (lower is better)
Translates to: GLRLLTASSSSCMWLGCCSESWP*FPGTLP
Trigger: TGGAAGAGTACCTGGGAAGCATGGCCAAGATTCAGA...ACAGCACCCCAACCACATACACGAGGAAGAAGATGCGGTCAGCAGTCTCAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp AGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACGAGACGACCTTACTGTaGCGCGTCATCAGGCTGCGA +
Preference number: 4 (lower is better)
Translates to: RGKLTLVYLSNDTPVWWNETTLL*RVIRLR
Trigger: TCGCAGCCTGATGACGCGGCACAGTAAGGTCGTCTC...GTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAGAGACGACCTTACTGTaGCGCGTCATCAGGCTGCGA +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQAETTLL*RVIRLR
Trigger: TCGCAGCCTGATGACGCGGCACAGTAAGGTCGTCTC...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAAGCTGGTACTCGCTCTaGGCCAGCTTGACGAAGGCA +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQASWYSL*ASLTKA
Trigger: TGCCTTCGTCAAGCTGGCGCAGAGCGAGTACCAGCT...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAGTCTTCTTCTGGTGGTaGTCGGGGATGATGTCGGCC +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQAVFFWW*SGMMSA
Trigger: GGCCGACATCATCCCCGAGCACCACCAGAAGAAGAC...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp AGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACGTCTTCTTCTGGTGGTaGTCGGGGATGATGTCGGCC +
Preference number: 4 (lower is better)
Translates to: RGKLTLVYLSNDTPVWWNVFFWW*SGMMSA
Trigger: GGCCGACATCATCCCCGAGCACCACCAGAAGAAGAC...GTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp CAGCCCAGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGAACTCAGGCTTGGTCTaGTTGAGGTGTCGCAGGATG +
Preference number: 4 (lower is better)
Translates to: QPRGKLTLVYLSNDTPVWNSGLV*LRCRRM
Trigger: CATCCTGCGACACCTCAAGCAGACCAAGCCTGAGTT...CCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCTGGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCACGCTCCTTGATAATCTaGCGCTCCTTGTCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQARSLII*RSLSRS
Trigger: GCTCCGGGACAAGGAGCGGCAGATTATCAAGGAGCG...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp AGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCGCTCCTTGATAATCTaGCGCTCCTTGTCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: RGKLTLVYLSNDTPVWWNRSLII*RSLSRS
Trigger: GCTCCGGGACAAGGAGCGGCAGATTATCAAGGAGCG...GTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGATCATGTCGCCCACCTaGTCCACCCCGTACTTGATG +
Preference number: 4 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQIMSPT*STPYLM
Trigger: CATCAAGTACGGGGTGGAGCAGGTGGGCGACATGAT...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp TTTCCCTGTATCTCTCCCCACAGAGCCCTCCAGAGGAGTAAAGGGGTCACAGAGTGTATGTGGTTGGGGTaGTGTGCACCCAATTCGTCT +
Preference number: 4 (lower is better)
Translates to: FPCISPHRALQRSKGVTECMWLG*CAPNSS
Trigger: AGACGAATTGGGTGCACAGCACCCCAACCACATACA...CTCTGTGACCCCTTTACTCCTCTGGAGGGCTCTGTGGGGAGAGATACAGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAATGCGAATGACATCCTaGAGCACGCTCTCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQAMRMTS*STLSGR
Trigger: CCTGCCCGAGAGCGTGCTCCAGGATGTCATTCGCAT...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCACCCTGGCCGCTTGACTaGCTTCTTGGTAGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQAPWPLD*LLGRCV
Trigger: GACACACCTACCAAGAAGCCAGTCAAGCGGCCAGGG...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp TGTGCACCCAATTCGTCTTTGCAGGAATCTGGATGTGGGCAGCGTGCAAGTCTGTCGAAGGTCTTCTTCTaGTGGTGCTCGGGGATGATG +
Preference number: 4 (lower is better)
Translates to: CAPNSSLQESGCGQRASLSKVFF*WCSGMM
Trigger: CATCATCCCCGAGCACCACCAGAAGAAGACCTTCGA...CAGACTTGCACGCTGCCCACATCCAGATTCCTGCAAAGACGAATTGGGTGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAAGTCGTGTCGCACAATaGCCTTCCGGGCAGCAGACA +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQASRVAQ*PSGQQT
Trigger: TGTCTGCTGCCCGGAAGGCCATTGTGCGACACGACT...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAAGTCCTCCAGCGCTTTaGCACCGATGGTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQASPPAL*HRWSPW
Trigger: CCATGGAGACCATCGGTGCCAAAGCGCTGGAGGACT...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACAGTCCTCCAGCGCTTTaGCACCGATGGTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: RGKLTLVYLSNDTPVWWNSPPAL*HRWSPW
Trigger: CCATGGAGACCATCGGTGCCAAAGCGCTGGAGGACT...GTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGCAGAGCTGTAGCTGGTaGCCGAAGAGCTGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQQSCSW*PKSWSL
Trigger: AAGAGACCAGCTCTTCGGCCACCAGCTACAGCTCTG...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000405575.8
ENST00000589210.6
CDS-3UTR CCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAGATGGCGCTCAGAGCTaGGTCCTCGTACACCTTGGA +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQADGAQS*VLVHLG
Trigger: TCCAAGGTGTACGAGGACCCAGCTCTGAGCGCCATC...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAATGGTCTTCTGGGCCTaGCGAATCCTGTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQAMVFWA*RILSLC
Trigger: GCAGAGGGACAGGATTCGCCAGGCCCAGAAGACCAT...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACATGGTCTTCTGGGCCTaGCGAATCCTGTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: RGKLTLVYLSNDTPVWWNMVFWA*RILSLC
Trigger: GCAGAGGGACAGGATTCGCCAGGCCCAGAAGACCAT...GTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp GCAAGTGTGCCTCAAGGGTCAGTCTTCAATCTCGTCCTAAATAGGTGGGGCCCTTTGACAATGGTCTTCTaGGCCTGGCGAATCCTGTCC +
Preference number: 4 (lower is better)
Translates to: ASVPQGSVFNLVLNRWGPLTMVF*AWRILS
Trigger: GGACAGGATTCGCCAGGCCCAGAAGACCATTGTCAA...AGGGCCCCACCTATTTAGGACGAGATTGAAGACTGACCCTTGAGGCACACTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGAATGACACGCCAGTCTaGTGGAACCAGGCAGGGCTA +
Preference number: 4 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQNDTPV*WNQAGL
Trigger: TAGCCCTGCCTGGTTCCACCAGACTGGCGTGTCATT...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGATAAAAGCCAAGGTGTaGAGGGACCCCAGGCTTCCG +
Preference number: 4 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQIKAKV*RDPRLP
Trigger: CGGAAGCCTGGGGTCCCTCCACACCTTGGCTTTTAT...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACAAGTTTGCTTTCCCATaGCTGGGGGCGGGCCATGAC +
Preference number: 4 (lower is better)
Translates to: RGKLTLVYLSNDTPVWWNKFAFP*LGAGHD
Trigger: GTCATGGCCCGCCCCCAGCCATGGGAAAGCAAACTT...GTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCCATCATCGCTCTCTTaGTGCCTGCAGAGGCACTGC +
Preference number: 4 (lower is better)
Translates to: RGKLTLVYLSNDTPVWWNPSSLS*CLQRHC
Trigger: GCAGTGCCTCTGCAGGCACCAAGAGAGCGATGATGG...GTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR CCA 90 bp CATGTTGAGGGGACCTTGAAGAACAGCTCCTTTCCCTGTATCTCTCCCCACAGACCCAGACTTGGCAGCTaGGATCTCTCCTTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: HVEGTLKNSSFPCISPHRPRLGS*DLSFLV
Trigger: AACCAGGAAGGAGAGATCCCAGCTGCCAAGTCTGGG...TCTGTGGGGAGAGATACAGGGAAAGGAGCTGTTCTTCAAGGTCCCCTCAACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR CCA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGTGCTACCCCCAGACTTaGCAGCTGGGATCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQCYPQT*QLGSLL
Trigger: AAGGAGAGATCCCAGCTGCCAAGTCTGGGGGTAGCA...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR CCA 90 bp AGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACTGGTGGCCGAAGAGCTaGTCTCTCGGGGGTCTAAAG +
Preference number: 4 (lower is better)
Translates to: RGKLTLVYLSNDTPVWWNWWPKS*SLGGLK
Trigger: CTTTAGACCCCCGAGAGACCAGCTCTTCGGCCACCA...GTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000467929.6
ENST00000607838.5
CDS-3UTR TCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAGCAGTTTCACTTTGTTaGGTTCCGGGCTGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQAAVSLC*VPGCLG
Trigger: GCCCAGACAGCCCGGAACTCAACAAAGTGAAACTGC...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAGCTCCACCCCGTACTTaGTGTACTTCTCCGGGTTCT +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQAAPPRT*CTSPGS
Trigger: AGAACCCGGAGAAGTACATCAAGTACGGGGTGGAGC...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp GCAAGTGTGCCTCAAGGGTCAGTCTTCAATCTCGTCCTAAATAGGTGGGGCCCTGGTTTATCTGTCCAATaGCACGCCAGTCTGGTGGAA +
Preference number: 4 (lower is better)
Translates to: ASVPQGSVFNLVLNRWGPGLSVQ*HASLVE
Trigger: TTCCACCAGACTGGCGTGTCATTGGACAGATAAACC...AGGGCCCCACCTATTTAGGACGAGATTGAAGACTGACCCTTGAGGCACACTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp CAGCCCAGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTTCTCCGTCTGCTTGTaGACAGGGATGATGGAGTTC +
Preference number: 4 (lower is better)
Translates to: QPRGKLTLVYLSNDTPVWFSVCL*TGMMEF
Trigger: GAACTCCATCATCCCTGTGCACAAGCAGACGGAGAA...CCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCTGGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp CAGCCCAGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGCAGATTCTCCGTCTaGTTGTGCACAGGGATGATG +
Preference number: 4 (lower is better)
Translates to: QPRGKLTLVYLSNDTPVWCRFSV*LCTGMM
Trigger: CATCATCCCTGTGCACAAGCAGACGGAGAATCTGCA...CCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCTGGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCATTCTCCTGCAGCCGCTaGAGATTCTCCGTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQAFSCSR*RFSVCL
Trigger: CAAGCAGACGGAGAATCTGCAGCGGCTGCAGGAGAA...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp CAGCCCAGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTTCTCAACATTCTCCTaGAGCCGCTGCAGATTCTCC +
Preference number: 4 (lower is better)
Translates to: QPRGKLTLVYLSNDTPVWFSTFS*SRCRFS
Trigger: GGAGAATCTGCAGCGGCTGCAGGAGAATGTTGAGAA...CCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCTGGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp TGTGCACCCAATTCGTCTTTGCAGGAATCTGGATGTGGGCAGCGTGCAAGTCTGTTCTCAACATTCTCCTaGAGCCGCTGCAGATTCTCC +
Preference number: 4 (lower is better)
Translates to: CAPNSSLQESGCGQRASLFSTFS*SRCRFS
Trigger: GGAGAATCTGCAGCGGCTGCAGGAGAATGTTGAGAA...CAGACTTGCACGCTGCCCACATCCAGATTCCTGCAAAGACGAATTGGGTGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGAACTCAGGCTTGGTCTaGTTGAGGTGTCGCAGGATG +
Preference number: 4 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQNSGLV*LRCRRM
Trigger: CATCCTGCGACACCTCAAGCAGACCAAGCCTGAGTT...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp CATGTTGAGGGGACCTTGAAGAACAGCTCCTTTCCCTGTATCTCTCCCCACAGAAACTCAGGCTTGGTCTaGTTGAGGTGTCGCAGGATG +
Preference number: 4 (lower is better)
Translates to: HVEGTLKNSSFPCISPHRNSGLV*LRCRRM
Trigger: CATCCTGCGACACCTCAAGCAGACCAAGCCTGAGTT...TCTGTGGGGAGAGATACAGGGAAAGGAGCTGTTCTTCAAGGTCCCCTCAACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp AGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACATCATGTCGCCCACCTaGTCCACCCCGTACTTGATG +
Preference number: 4 (lower is better)
Translates to: RGKLTLVYLSNDTPVWWNIMSPT*STPYLM
Trigger: CATCAAGTACGGGGTGGAGCAGGTGGGCGACATGAT...GTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAATCATGTCGCCCACCTaGTCCACCCCGTACTTGATG +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQAIMSPT*STPYLM
Trigger: CATCAAGTACGGGGTGGAGCAGGTGGGCGACATGAT...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp AGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCCTAATTGCTCCTTCTaGAACCACGACTGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: RGKLTLVYLSNDTPVWWNPNCSF*NHDCLA
Trigger: GGCCAGGCAGTCGTGGTTGCAGAAGGAGCAATTAGG...GTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp CAGCCCAGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGCACCCAATTCGTCTTTaGAGGAATCTGGATGTGGGC +
Preference number: 4 (lower is better)
Translates to: QPRGKLTLVYLSNDTPVWHPIRL*RNLDVG
Trigger: GCCCACATCCAGATTCCTGCAAAGACGAATTGGGTG...CCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCTGGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp CATGTTGAGGGGACCTTGAAGAACAGCTCCTTTCCCTGTATCTCTCCCCACAGATCCCCTGATAACCCATaGCTTGCACAGCCTAAGAGG +
Preference number: 4 (lower is better)
Translates to: HVEGTLKNSSFPCISPHRSPDNP*LAQPKR
Trigger: CCTCTTAGGCTGTGCAAGGCATGGGTTATCAGGGGA...TCTGTGGGGAGAGATACAGGGAAAGGAGCTGTTCTTCAAGGTCCCCTCAACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR GCA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGTCCCCTGATAACCCATaGCTTGCACAGCCTAAGAGG +
Preference number: 4 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQSPDNP*LAQPKR
Trigger: CCTCTTAGGCTGTGCAAGGCATGGGTTATCAGGGGA...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR CCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAAGCGGATGCCTCCTGTaGGGGAATCATCGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQASGCLL*GNHRSE
Trigger: TTCAGAGCGATGATTCCCCCACAGGAGGCATCCGCT...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335146.11
ENST00000405575.8
ENST00000589210.6
CDS-3UTR CCA 90 bp GGCCTGAGACTGCTGACCGCATCTTCTTCCTCGTGTATGTGGTTGGGGTGCTGTACGTTCATGAAATCTTaGTTGCGGCCATATTCCACC +
Preference number: 4 (lower is better)
Translates to: GLRLLTASSSSCMWLGCCTFMKS*LRPYST
Trigger: GGTGGAATATGGCCGCAACCAAGATTTCATGAACGT...ACAGCACCCCAACCACATACACGAGGAAGAAGATGCGGTCAGCAGTCTCAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCACTTACGGATCGTCCCTaGCCGCTTGACTGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQALTDRP*PLDWLL
Trigger: AAGAAGCCAGTCAAGCGGCCAGGGACGATCCGTAAG...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGAAGGTCTTCTTCTGGTaGTGCTCGGGGATGATGTCG +
Preference number: 4 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQKVFFW*CSGMMS
Trigger: CGACATCATCCCCGAGCACCACCAGAAGAAGACCTT...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGTCGAAGGTCTTCTTCTaGTGGTGCTCGGGGATGATG +
Preference number: 4 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQSKVFF*WCSGMM
Trigger: CATCATCCCCGAGCACCACCAGAAGAAGACCTTCGA...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAACTCAGAGCTGTAGCTaGTGGCCGAAGAGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQATQSCS*WPKSWS
Trigger: AGACCAGCTCTTCGGCCACCAGCTACAGCTCTGAGT...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp CAGCCCAGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGAGCTTGACTCCCGGCTaGAACACAGGTAGATTCTTC +
Preference number: 4 (lower is better)
Translates to: QPRGKLTLVYLSNDTPVWSLTPG*NTGRFF
Trigger: GAAGAATCTACCTGTGTTCCAGCCGGGAGTCAAGCT...CCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCTGGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGTTGACAATGGTCTTCTaGGCCTGGCGAATCCTGTCC +
Preference number: 4 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQLTMVF*AWRILS
Trigger: GGACAGGATTCGCCAGGCCCAGAAGACCATTGTCAA...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAAATGACACGCCAGTCTaGTGGAACCAGGCAGGGCTA +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQANDTPV*WNQAGL
Trigger: TAGCCCTGCCTGGTTCCACCAGACTGGCGTGTCATT...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCACTGCCCTGCTGCTCTTaGTACACATGGAGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQALPCCS*YTWSSS
Trigger: ACTGCTGCTCCATGTGTACCAAGAGCAGCAGGGCAG...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAGCAGGAATCTGGATGTaGGCAGCGTGCAAGTCTGAC +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQAAGIWM*AACKSD
Trigger: GTCAGACTTGCACGCTGCCCACATCCAGATTCCTGC...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp CATGTTGAGGGGACCTTGAAGAACAGCTCCTTTCCCTGTATCTCTCCCCACAGAGTCTTTGCAGGAATCTaGATGTGGGCAGCGTGCAAG +
Preference number: 4 (lower is better)
Translates to: HVEGTLKNSSFPCISPHRVFAGI*MWAACK
Trigger: CTTGCACGCTGCCCACATCCAGATTCCTGCAAAGAC...TCTGTGGGGAGAGATACAGGGAAAGGAGCTGTTCTTCAAGGTCCCCTCAACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGCATGTCATCTCTCCCTaGCCGCTTGACTGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQHVISP*PLDWLL
Trigger: AAGAAGCCAGTCAAGCGGCCAGGGAGAGATGACATG...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332065.9
CDS-3UTR TCA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGTGTTTCAGAAGGTTCTaGGCCTTACGGATCGTCCCT +
Preference number: 4 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQCFRRF*ALRIVP
Trigger: AGGGACGATCCGTAAGGCTCAGAACCTTCTGAAACA...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335146.11
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGGTTTATCTGTCCAATaGCACGCCAGTCTGGTGGAA +
Preference number: 4 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQGLSVQ*HASLVE
Trigger: TTCCACCAGACTGGCGTGTCATTGGACAGATAAACC...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGATGTTGAGGGGACCTTaGAGAACAGCTCCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQMLRGP*RTAPFP
Trigger: AGGGAAAGGAGCTGTTCTTCAAGGTCCCCTCAACAT...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp CATGTTGAGGGGACCTTGAAGAACAGCTCCTTTCCCTGTATCTCTCCCCACAGATTCTCCGTCTGCTTGTaGACAGGGATGATGGAGTTC +
Preference number: 4 (lower is better)
Translates to: HVEGTLKNSSFPCISPHRFSVCL*TGMMEF
Trigger: GAACTCCATCATCCCTGTGCACAAGCAGACGGAGAA...TCTGTGGGGAGAGATACAGGGAAAGGAGCTGTTCTTCAAGGTCCCCTCAACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp CATGTTGAGGGGACCTTGAAGAACAGCTCCTTTCCCTGTATCTCTCCCCACAGATGCAGATTCTCCGTCTaGTTGTGCACAGGGATGATG +
Preference number: 4 (lower is better)
Translates to: HVEGTLKNSSFPCISPHRCRFSV*LCTGMM
Trigger: CATCATCCCTGTGCACAAGCAGACGGAGAATCTGCA...TCTGTGGGGAGAGATACAGGGAAAGGAGCTGTTCTTCAAGGTCCCCTCAACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGTGCAGATTCTCCGTCTaGTTGTGCACAGGGATGATG +
Preference number: 4 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQCRFSV*LCTGMM
Trigger: CATCATCCCTGTGCACAAGCAGACGGAGAATCTGCA...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGTTCTCAACATTCTCCTaGAGCCGCTGCAGATTCTCC +
Preference number: 4 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQFSTFS*SRCRFS
Trigger: GGAGAATCTGCAGCGGCTGCAGGAGAATGTTGAGAA...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp GCAAGTGTGCCTCAAGGGTCAGTCTTCAATCTCGTCCTAAATAGGTGGGGCCCTTCTGAATCTTGGCCATaGTTCCCAGGTACTCTTCCA +
Preference number: 4 (lower is better)
Translates to: ASVPQGSVFNLVLNRWGPSESWP*FPGTLP
Trigger: TGGAAGAGTACCTGGGAAGCATGGCCAAGATTCAGA...AGGGCCCCACCTATTTAGGACGAGATTGAAGACTGACCCTTGAGGCACACTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp GGCCTGAGACTGCTGACCGCATCTTCTTCCTCGTGTATGTGGTTGGGGTGCTGTCTGCTCTTATGGAAATaGTCCTTCAGTCCTTTGATG +
Preference number: 4 (lower is better)
Translates to: GLRLLTASSSSCMWLGCCLLLWK*SFSPLM
Trigger: CATCAAAGGACTGAAGGAGCATTTCCATAAGAGCAG...ACAGCACCCCAACCACATACACGAGGAAGAAGATGCGGTCAGCAGTCTCAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp GCAAGTGTGCCTCAAGGGTCAGTCTTCAATCTCGTCCTAAATAGGTGGGGCCCTCCCCAGAGGAAGAACTaGTCTTATGGAAATGCTCCT +
Preference number: 4 (lower is better)
Translates to: ASVPQGSVFNLVLNRWGPPQRKN*SYGNAP
Trigger: AGGAGCATTTCCATAAGAGCAGTTCTTCCTCTGGGG...AGGGCCCCACCTATTTAGGACGAGATTGAAGACTGACCCTTGAGGCACACTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp TGTGCACCCAATTCGTCTTTGCAGGAATCTGGATGTGGGCAGCGTGCAAGTCTGCCCCAGAGGAAGAACTaGTCTTATGGAAATGCTCCT +
Preference number: 4 (lower is better)
Translates to: CAPNSSLQESGCGQRASLPQRKN*SYGNAP
Trigger: AGGAGCATTTCCATAAGAGCAGTTCTTCCTCTGGGG...CAGACTTGCACGCTGCCCACATCCAGATTCCTGCAAAGACGAATTGGGTGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAAACTCAGGCTTGGTCTaGTTGAGGTGTCGCAGGATG +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQANSGLV*LRCRRM
Trigger: CATCCTGCGACACCTCAAGCAGACCAAGCCTGAGTT...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp CTTCGGCATGTTGTACTCCTTGTCCGGGTCATTCTTGATGTTGTCTGCGAAGTCAACTCAGGCTTGGTCTaGTTGAGGTGTCGCAGGATG +
Preference number: 4 (lower is better)
Translates to: LRHVVLLVRVILDVVCEVNSGLV*LRCRRM
Trigger: CATCCTGCGACACCTCAAGCAGACCAAGCCTGAGTT...GACTTCGCAGACAACATCAAGAATGACCCGGACAAGGAGTACAACATGCCGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592559.1
CDS-3UTR GCA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGTGTATGTGGTTGGGGTaGTGTGCACCCAATTCGTCT +
Preference number: 4 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQCMWLG*CAPNSS
Trigger: AGACGAATTGGGTGCACAGCACCCCAACCACATACA...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAAAGGTCTTCTTCTGGTaGTGCTCGGGGATGATGTCG +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQAKVFFW*CSGMMS
Trigger: CGACATCATCCCCGAGCACCACCAGAAGAAGACCTT...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACTCGAAGGTCTTCTTCTaGTGGTGCTCGGGGATGATG +
Preference number: 4 (lower is better)
Translates to: RGKLTLVYLSNDTPVWWNSKVFF*WCSGMM
Trigger: CATCATCCCCGAGCACCACCAGAAGAAGACCTTCGA...GTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCATCGAAGGTCTTCTTCTaGTGGTGCTCGGGGATGATG +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQASKVFF*WCSGMM
Trigger: CATCATCCCCGAGCACCACCAGAAGAAGACCTTCGA...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCATTGACAATGGTCTTCTaGGCCTGGCGAATCCTGTCC +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQALTMVF*AWRILS
Trigger: GGACAGGATTCGCCAGGCCCAGAAGACCATTGTCAA...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAGTCTTTGCAGGAATCTaGATGTGGGCAGCGTGCAAG +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQAVFAGI*MWAACK
Trigger: CTTGCACGCTGCCCACATCCAGATTCCTGCAAAGAC...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCACCCTTGACTCCCGGCTaGAACACAGGTAGATTCTTC +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQAPLTPG*NTGRFF
Trigger: GAAGAATCTACCTGTGTTCCAGCCGGGAGTCAAGGG...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405575.8
CDS-3UTR TCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCATGTTTCAGAAGGTTCTaGGCCTTACGGATCGTCCCT +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQACFRRF*ALRIVP
Trigger: AGGGACGATCCGTAAGGCTCAGAACCTTCTGAAACA...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAGGTTTATCTGTCCAATaGCACGCCAGTCTGGTGGAA +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQAGLSVQ*HASLVE
Trigger: TTCCACCAGACTGGCGTGTCATTGGACAGATAAACC...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAATGTTGAGGGGACCTTaGAGAACAGCTCCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQAMLRGP*RTAPFP
Trigger: AGGGAAAGGAGCTGTTCTTCAAGGTCCCCTCAACAT...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp GTGCTATATCCTTCTGTGTATTCTACTGCATACATCCTCAAGCTGGCTCCATGTCCCTTACCACTTTGTTaGGTTCCGGGCTGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: VLYPSVYSTAYILKLAPCPLPLC*VPGCLG
Trigger: GCCCAGACAGCCCGGAACTCAACAAAGTGGTAAGGG...ACATGGAGCCAGCTTGAGGATGTATGCAGTAGAATACACAGAAGGATATAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406660.4
CDS-3UTR GCA 90 bp AGCAGAGATCCTAATGCCTATAGGATGTACTGTGCTATATCCTTCTGTGTATTCCCGCCGTCGAGCGGATaGCTCCTGTGGGGGAATCAT +
Preference number: 4 (lower is better)
Translates to: SRDPNAYRMYCAISFCVFPPSSG*LLWGNH
Trigger: ATGATTCCCCCACAGGAGGCATCCGCTCGACGGCGG...GAATACACAGAAGGATATAGCACAGTACATCCTATAGGCATTAGGATCTCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406660.4
CDS-3UTR GCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCATTCTCCGTCTGCTTGTaGACAGGGATGATGGAGTTC +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQAFSVCL*TGMMEF
Trigger: GAACTCCATCATCCCTGTGCACAAGCAGACGGAGAA...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp AGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACTTCTCCGTCTGCTTGTaGACAGGGATGATGGAGTTC +
Preference number: 4 (lower is better)
Translates to: RGKLTLVYLSNDTPVWWNFSVCL*TGMMEF
Trigger: GAACTCCATCATCCCTGTGCACAAGCAGACGGAGAA...GTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCATGCAGATTCTCCGTCTaGTTGTGCACAGGGATGATG +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQACRFSV*LCTGMM
Trigger: CATCATCCCTGTGCACAAGCAGACGGAGAATCTGCA...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp GCTATATCCTTCTGTGTATTCTACTGCATACATCCTCAAGCTGGCTCCATGTCCTTCTCCTGCAGCCGCTaGAGATTCTCCGTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: AISFCVFYCIHPQAGSMSFSCSR*RFSVCL
Trigger: CAAGCAGACGGAGAATCTGCAGCGGCTGCAGGAGAA...GGACATGGAGCCAGCTTGAGGATGTATGCAGTAGAATACACAGAAGGATATAGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406660.4
CDS-3UTR GCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCATTCTCAACATTCTCCTaGAGCCGCTGCAGATTCTCC +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQAFSTFS*SRCRFS
Trigger: GGAGAATCTGCAGCGGCTGCAGGAGAATGTTGAGAA...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCACACCCAATTCGTCTTTaGAGGAATCTGGATGTGGGC +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQAHPIRL*RNLDVG
Trigger: GCCCACATCCAGATTCCTGCAAAGACGAATTGGGTG...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAAGTTCAACTGCAGGTTaGCCAGCACTTTACCTTGGG +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQASSTAG*PALYLG
Trigger: CCCAAGGTAAAGTGCTGGGCAACCTGCAGTTGAACT...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357231.8
CDS-3UTR CCA 90 bp TGTGCACCCAATTCGTCTTTGCAGGAATCTGGATGTGGGCAGCGTGCAAGTCTGACGTTCATGAAATCTTaGTTGCGGCCATATTCCACC +
Preference number: 4 (lower is better)
Translates to: CAPNSSLQESGCGQRASLTFMKS*LRPYST
Trigger: GGTGGAATATGGCCGCAACCAAGATTTCATGAACGT...CAGACTTGCACGCTGCCCACATCCAGATTCCTGCAAAGACGAATTGGGTGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp CAGCCCAGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGCCATCTAGACCATGCTaGGAATACTGTTTCAGAAGG +
Preference number: 4 (lower is better)
Translates to: QPRGKLTLVYLSNDTPVWPSRPC*EYCFRR
Trigger: CCTTCTGAAACAGTATTCCCAGCATGGTCTAGATGG...CCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCTGGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAAGCTTGACTCCCGGCTaGAACACAGGTAGATTCTTC +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQASLTPG*NTGRFF
Trigger: GAAGAATCTACCTGTGTTCCAGCCGGGAGTCAAGCT...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGTGGGAAGCCCTTCTATaGATCGGTTTTGTGTCCAAG +
Preference number: 4 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQWEALL*IGFVSK
Trigger: CTTGGACACAAAACCGATCCATAGAAGGGCTTCCCA...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR TCA 90 bp TGTGCACCCAATTCGTCTTTGCAGGAATCTGGATGTGGGCAGCGTGCAAGTCTGACTTCTCCAGGGACTTaGGGATGTAATTGTAGTTGT +
Preference number: 4 (lower is better)
Translates to: CAPNSSLQESGCGQRASLTSPGT*GCNCSC
Trigger: ACAACTACAATTACATCCTCAAGTCCCTGGAGAAGT...CAGACTTGCACGCTGCCCACATCCAGATTCCTGCAAAGACGAATTGGGTGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp CAGCCCAGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGACTTCTCCAGGGACTTaGGGATGTAATTGTAGTTGT +
Preference number: 4 (lower is better)
Translates to: QPRGKLTLVYLSNDTPVWTSPGT*GCNCSC
Trigger: ACAACTACAATTACATCCTCAAGTCCCTGGAGAAGT...CCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCTGGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR TCA 90 bp GCAAGTGTGCCTCAAGGGTCAGTCTTCAATCTCGTCCTAAATAGGTGGGGCCCTACTTCTCCAGGGACTTaGGGATGTAATTGTAGTTGT +
Preference number: 4 (lower is better)
Translates to: ASVPQGSVFNLVLNRWGPTSPGT*GCNCSC
Trigger: ACAACTACAATTACATCCTCAAGTCCCTGGAGAAGT...AGGGCCCCACCTATTTAGGACGAGATTGAAGACTGACCCTTGAGGCACACTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCATCTGAATCTTGGCCATaGTTCCCAGGTACTCTTCCA +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQASESWP*FPGTLP
Trigger: TGGAAGAGTACCTGGGAAGCATGGCCAAGATTCAGA...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp AGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACTCTGAATCTTGGCCATaGTTCCCAGGTACTCTTCCA +
Preference number: 4 (lower is better)
Translates to: RGKLTLVYLSNDTPVWWNSESWP*FPGTLP
Trigger: TGGAAGAGTACCTGGGAAGCATGGCCAAGATTCAGA...GTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp CAGCCCAGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGCTGCTCTTATGGAAATaGTCCTTCAGTCCTTTGATG +
Preference number: 4 (lower is better)
Translates to: QPRGKLTLVYLSNDTPVWLLLWK*SFSPLM
Trigger: CATCAAAGGACTGAAGGAGCATTTCCATAAGAGCAG...CCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCTGGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCACCCCAGAGGAAGAACTaGTCTTATGGAAATGCTCCT +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQAPQRKN*SYGNAP
Trigger: AGGAGCATTTCCATAAGAGCAGTTCTTCCTCTGGGG...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp AGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCCCCAGAGGAAGAACTaGTCTTATGGAAATGCTCCT +
Preference number: 4 (lower is better)
Translates to: RGKLTLVYLSNDTPVWWNPQRKN*SYGNAP
Trigger: AGGAGCATTTCCATAAGAGCAGTTCTTCCTCTGGGG...GTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAAGGCCTTCTGGATTTTaGACAGTTCTTCGAGGCCAT +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQARPSGF*TVLRGH
Trigger: ATGGCCTCGAAGAACTGTGCAAAATCCAGAAGGCCT...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp AGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACAGGCCTTCTGGATTTTaGACAGTTCTTCGAGGCCAT +
Preference number: 4 (lower is better)
Translates to: RGKLTLVYLSNDTPVWWNRPSGF*TVLRGH
Trigger: ATGGCCTCGAAGAACTGTGCAAAATCCAGAAGGCCT...GTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp GTGCTATATCCTTCTGTGTATTCTACTGCATACATCCTCAAGCTGGCTCCATGTAGCGGATGCCTCCTGTaGGGGAATCATCGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: VLYPSVYSTAYILKLAPCSGCLL*GNHRSE
Trigger: TTCAGAGCGATGATTCCCCCACAGGAGGCATCCGCT...ACATGGAGCCAGCTTGAGGATGTATGCAGTAGAATACACAGAAGGATATAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406660.4
CDS-3UTR CCA 90 bp CAGCCCAGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGGAAGAACTGCTCTTATaGAAATGCTCCTTCAGTCCT +
Preference number: 4 (lower is better)
Translates to: QPRGKLTLVYLSNDTPVWEELLL*KCSFSP
Trigger: AGGACTGAAGGAGCATTTCCATAAGAGCAGTTCTTC...CCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCTGGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGCCATCTAGACCATGCTaGGAATACTGTTTCAGAAGG +
Preference number: 4 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQPSRPC*EYCFRR
Trigger: CCTTCTGAAACAGTATTCCCAGCATGGTCTAGATGG...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335146.11
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp TGTGCACCCAATTCGTCTTTGCAGGAATCTGGATGTGGGCAGCGTGCAAGTCTGTTGCAAAACAAGGTTTaGGAAGCCCTTCTATGGATC +
Preference number: 4 (lower is better)
Translates to: CAPNSSLQESGCGQRASLLQNKV*EALLWI
Trigger: GATCCATAGAAGGGCTTCCCAAACCTTGTTTTGCAA...CAGACTTGCACGCTGCCCACATCCAGATTCCTGCAAAGACGAATTGGGTGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR GCA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGCTGCTCTTATGGAAATaGTCCTTCAGTCCTTTGATG +
Preference number: 4 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQLLLWK*SFSPLM
Trigger: CATCAAAGGACTGAAGGAGCATTTCCATAAGAGCAG...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGTTCCCATCTAGACCATaGTGGGAATACTGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQFPSRP*WEYCFR
Trigger: TCTGAAACAGTATTCCCAGCATGGTCTAGATGGGAA...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335146.11
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAACGTTCATGAAATCTTaGTTGCGGCCATATTCCACC +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQATFMKS*LRPYST
Trigger: GGTGGAATATGGCCGCAACCAAGATTTCATGAACGT...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACACGTTCATGAAATCTTaGTTGCGGCCATATTCCACC +
Preference number: 4 (lower is better)
Translates to: RGKLTLVYLSNDTPVWWNTFMKS*LRPYST
Trigger: GGTGGAATATGGCCGCAACCAAGATTTCATGAACGT...GTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGAAGAACTGCTCTTATaGAAATGCTCCTTCAGTCCT +
Preference number: 4 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQEELLL*KCSFSP
Trigger: AGGACTGAAGGAGCATTTCCATAAGAGCAGTTCTTC...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCCATCTAGACCATGCTaGGAATACTGTTTCAGAAGG +
Preference number: 4 (lower is better)
Translates to: RGKLTLVYLSNDTPVWWNPSRPC*EYCFRR
Trigger: CCTTCTGAAACAGTATTCCCAGCATGGTCTAGATGG...GTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCACCATCTAGACCATGCTaGGAATACTGTTTCAGAAGG +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQAPSRPC*EYCFRR
Trigger: CCTTCTGAAACAGTATTCCCAGCATGGTCTAGATGG...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACAGGCCTTCCTTCAACTaGAGACAATTTGGGATGTTG +
Preference number: 4 (lower is better)
Translates to: RGKLTLVYLSNDTPVWWNRPSFN*RQFGML
Trigger: CAACATCCCAAATTGTCTCCAGTTGAAGGAAGGCCT...GTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR TCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAACTTCTCCAGGGACTTaGGGATGTAATTGTAGTTGT +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQATSPGT*GCNCSC
Trigger: ACAACTACAATTACATCCTCAAGTCCCTGGAGAAGT...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCACTGCTCTTATGGAAATaGTCCTTCAGTCCTTTGATG +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQALLLWK*SFSPLM
Trigger: CATCAAAGGACTGAAGGAGCATTTCCATAAGAGCAG...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCATTCCCATCTAGACCATaGTGGGAATACTGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQAFPSRP*WEYCFR
Trigger: TCTGAAACAGTATTCCCAGCATGGTCTAGATGGGAA...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp AGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACTTCCCATCTAGACCATaGTGGGAATACTGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: RGKLTLVYLSNDTPVWWNFPSRP*WEYCFR
Trigger: TCTGAAACAGTATTCCCAGCATGGTCTAGATGGGAA...GTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACGAAGAACTGCTCTTATaGAAATGCTCCTTCAGTCCT +
Preference number: 4 (lower is better)
Translates to: RGKLTLVYLSNDTPVWWNEELLL*KCSFSP
Trigger: AGGACTGAAGGAGCATTTCCATAAGAGCAGTTCTTC...GTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CCA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAGAAGAACTGCTCTTATaGAAATGCTCCTTCAGTCCT +
Preference number: 4 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQAEELLL*KCSFSP
Trigger: AGGACTGAAGGAGCATTTCCATAAGAGCAGTTCTTC...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR GCA 90 bp AGCAGAGATCCTAATGCCTATAGGATGTACTGTGCTATATCCTTCTGTGTATTCTTCTCCGTCTGCTTGTaGACAGGGATGATGGAGTTC +
Preference number: 4 (lower is better)
Translates to: SRDPNAYRMYCAISFCVFFSVCL*TGMMEF
Trigger: GAACTCCATCATCCCTGTGCACAAGCAGACGGAGAA...GAATACACAGAAGGATATAGCACAGTACATCCTATAGGCATTAGGATCTCTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406660.4
CDS-3UTR GCA 90 bp AGCAGAGATCCTAATGCCTATAGGATGTACTGTGCTATATCCTTCTGTGTATTCTGCAGATTCTCCGTCTaGTTGTGCACAGGGATGATG +
Preference number: 4 (lower is better)
Translates to: SRDPNAYRMYCAISFCVFCRFSV*LCTGMM
Trigger: CATCATCCCTGTGCACAAGCAGACGGAGAATCTGCA...GAATACACAGAAGGATATAGCACAGTACATCCTATAGGCATTAGGATCTCTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406660.4
CDS-3UTR GCA 90 bp AGCAGAGATCCTAATGCCTATAGGATGTACTGTGCTATATCCTTCTGTGTATTCTTCTCAACATTCTCCTaGAGCCGCTGCAGATTCTCC +
Preference number: 4 (lower is better)
Translates to: SRDPNAYRMYCAISFCVFFSTFS*SRCRFS
Trigger: GGAGAATCTGCAGCGGCTGCAGGAGAATGTTGAGAA...GAATACACAGAAGGATATAGCACAGTACATCCTATAGGCATTAGGATCTCTGCT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406660.4
3UTR CAA 72 bp CAACTGGAGACAATTTGGGATGTTGCAAAACAAGGTTaGGGAAGCCCTTCTATGGATCGGTTTTGTGTCCAA +
Preference number: 4 (lower is better)
Translates to: QLETIWDVAKQG*GSPSMDRFCVQ
Trigger: TTGGACACAAAACCGATCCATAGAAGGGCTTCCCAAACCTTGTTTTGCAACATCCCAAATTGTCTCCAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR TCA 90 bp GCTATATCCTTCTGTGTATTCTACTGCATACATCCTCAAGCTGGCTCCATGTCCAAAATGTGCAATTCTTaGAGCAGAGATCCTAATGCC +
Preference number: 4 (lower is better)
Translates to: AISFCVFYCIHPQAGSMSKMCNS*SRDPNA
Trigger: GGCATTAGGATCTCTGCTTCAAGAATTGCACATTTT...GGACATGGAGCCAGCTTGAGGATGTATGCAGTAGAATACACAGAAGGATATAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406660.4
CDS-3UTR GCA 90 bp TGTGCAATTCTTGAAGCAGAGATCCTAATGCCTATAGGATGTACTGTGCTATATTCTGAATCTTGGCCATaGTTCCCAGGTACTCTTCCA +
Preference number: 4 (lower is better)
Translates to: CAILEAEILMPIGCTVLYSESWP*FPGTLP
Trigger: TGGAAGAGTACCTGGGAAGCATGGCCAAGATTCAGA...ATATAGCACAGTACATCCTATAGGCATTAGGATCTCTGCTTCAAGAATTGCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406660.4
CDS-3UTR GCA 90 bp TGTGCAATTCTTGAAGCAGAGATCCTAATGCCTATAGGATGTACTGTGCTATATCTTCTCACGTTATTCTaGGGACCCCTTACCACTTTG +
Preference number: 4 (lower is better)
Translates to: CAILEAEILMPIGCTVLYLLTLF*GPLTTL
Trigger: CAAAGTGGTAAGGGGTCCGCAGAATAACGTGAGAAG...ATATAGCACAGTACATCCTATAGGCATTAGGATCTCTGCTTCAAGAATTGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406660.4
CDS-3UTR GCA 90 bp TGTGCAATTCTTGAAGCAGAGATCCTAATGCCTATAGGATGTACTGTGCTATATTTCTGTGTATTCTACTaGATACATCCTCAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: CAILEAEILMPIGCTVLYFCVFY*IHPQAG
Trigger: GCCAGCTTGAGGATGTATGCAGTAGAATACACAGAA...ATATAGCACAGTACATCCTATAGGCATTAGGATCTCTGCTTCAAGAATTGCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406660.4
CDS GCA 90 bp AAGTGGCAGGCCCGGCCGACGGCCTCCCACAGCGACCCCTCTGAGTaGCCAGGGCCAGCCCAGGGCTGGGATCCGCCCAGTGAAGAGCGC +
Preference number: 5 (lower is better)
Translates to: KWQARPTASHSDPSE*PGPAQGWDPPSEER
Trigger: GCGCTCTTCACTGGGCGGATCCCAGCCCTGGGCTGGCCCTGGGCACTCAGAGGGGTCGCTGTGGGAGGCCGTCGGCCGGGCCTGCCACTT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460476.5
ENST00000467586.5
CDS-3UTR CAA 90 bp AGGCTGCACCCCATGGCAGGCGGCCTAGACTGTAAAGGGGCAGGGCCTGGGCTGCGAAGAGCTGGTCTCTaGGGAGGCCAGCATGGCGCC +
Preference number: 5 (lower is better)
Translates to: RLHPMAGGLDCKGAGPGLRRAGL*GGQHGA
Trigger: GGCGCCATGCTGGCCTCCCAAGAGACCAGCTCTTCG...CAGCCCAGGCCCTGCCCCTTTACAGTCTAGGCCGCCTGCCATGGGGTGCAGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
CDS CCA 90 bp GAAGAGGATGGCCTGGGTGGGAAGAAAACGGTGCAGAAGGGCAAGTaGCAGGCCCGGCCGACGGCCTCCCACAGCGACCCCTCTGAGTGC +
Preference number: 5 (lower is better)
Translates to: EEDGLGGKKTVQKGK*QARPTASHSDPSEC
Trigger: GCACTCAGAGGGGTCGCTGTGGGAGGCCGTCGGCCGGGCCTGCCACTTGCCCTTCTGCACCGTTTTCTTCCCACCCAGGCCATCCTCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460476.5
ENST00000467586.5
CDS-3UTR CAA 90 bp AGGCTGCACCCCATGGCAGGCGGCCTAGACTGTAAAGGGGCAGGGCCTGGGCTGTCGCTCTGCGCCAGCTaGACGAAGGCACTGACGCAG +
Preference number: 5 (lower is better)
Translates to: RLHPMAGGLDCKGAGPGLSLCAS*TKALTQ
Trigger: CTGCGTCAGTGCCTTCGTCAAGCTGGCGCAGAGCGA...CAGCCCAGGCCCTGCCCCTTTACAGTCTAGGCCGCCTGCCATGGGGTGCAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS TCA 90 bp AGCAGCCGCCAAACCCGTCAGGCTCCCAATTGCCTCCAGGGATGCTaGGGTCGGTGCTTCACCACCTGGGAGGCCTCCCTGTCCCTCTCC +
Preference number: 5 (lower is better)
Translates to: SSRQTRQAPNCLQGC*GRCFTTWEASLSLS
Trigger: GGAGAGGGACAGGGAGGCCTCCCAGGTGGTGAAGCACCGACCTCAGCATCCCTGGAGGCAATTGGGAGCCTGACGGGTTTGGCGGCTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405068.3
CDS CCA 90 bp GTCCATCCTGCCACCCAGGACTGCTCACAAAGGTGCGAGCGGCTCTaGGCCAGGCTGAGTCCCTTCCACCAGTACTCTGCCTGGCCCTGG +
Preference number: 5 (lower is better)
Translates to: VHPATQDCSQRCERL*ARLSPFHQYSAWPW
Trigger: CCAGGGCCAGGCAGAGTACTGGTGGAAGGGACTCAGCCTGGCCCAGAGCCGCTCGCACCTTTGTGAGCAGTCCTGGGTGGCAGGATGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467586.5
CDS-3UTR CAA 90 bp AGGCTGCACCCCATGGCAGGCGGCCTAGACTGTAAAGGGGCAGGGCCTGGGCTGTCAGGCTTGGTCTGCTaGAGGTGTCGCAGGATGGGG +
Preference number: 5 (lower is better)
Translates to: RLHPMAGGLDCKGAGPGLSGLVC*RCRRMG
Trigger: CCCCATCCTGCGACACCTCAAGCAGACCAAGCCTGA...CAGCCCAGGCCCTGCCCCTTTACAGTCTAGGCCGCCTGCCATGGGGTGCAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp AGGCTGCACCCCATGGCAGGCGGCCTAGACTGTAAAGGGGCAGGGCCTGGGCTGTCCTTGTCCCGGAGCTaGACTCCCGGCTGGAACACA +
Preference number: 5 (lower is better)
Translates to: RLHPMAGGLDCKGAGPGLSLSRS*TPGWNT
Trigger: TGTGTTCCAGCCGGGAGTCAAGCTCCGGGACAAGGA...CAGCCCAGGCCCTGCCCCTTTACAGTCTAGGCCGCCTGCCATGGGGTGCAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS TCA 90 bp GCCTCCTGGCAGACGGGTGCTAGGACACCTCTCAGGCACAAAGGCTaGGCCAGGCTGGACCAAGGGGGAGAGGCCCTTCCCACTTCAGAG +
Preference number: 5 (lower is better)
Translates to: ASWQTGARTPLRHKG*ARLDQGGEALPTSE
Trigger: CTCTGAAGTGGGAAGGGCCTCTCCCCCTTGGTCCAGCCTGGCTCAGCCTTTGTGCCTGAGAGGTGTCCTAGCACCCGTCTGCCAGGAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467586.5
CDS GCA 90 bp CTCCTCCTGCTTCAGCTTGTCCTCAATCTCCCGCCGTCGAGCGGATaGCTCCTGTGGGGGAATCATCGCTCTGAACCCCGCGGCTCCCAC +
Preference number: 5 (lower is better)
Translates to: LLLLQLVLNLPPSSG*LLWGNHRSEPRGSH
Trigger: GTGGGAGCCGCGGGGTTCAGAGCGATGATTCCCCCACAGGAGGCATCCGCTCGACGGCGGGAGATTGAGGACAAGCTGAAGCAGGAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335146.11
ENST00000405068.3
ENST00000405575.8
ENST00000406660.4
ENST00000589210.6
CDS CCA 90 bp GAAGGAAAGGAAGGCACATGGGTGCTGACAGGCCAGTGGCGCAGCTaGCTGCCCCGGGACAACGCACCCTCTTGGAGGCCTGCTCTGAGA +
Preference number: 5 (lower is better)
Translates to: EGKEGTWVLTGQWRS*LPRDNAPSWRPALR
Trigger: TCTCAGAGCAGGCCTCCAAGAGGGTGCGTTGTCCCGGGGCAGCCAGCTGCGCCACTGGCCTGTCAGCACCCATGTGCCTTCCTTTCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467586.5
CDS-3UTR CAA 90 bp AGGCTGCACCCCATGGCAGGCGGCCTAGACTGTAAAGGGGCAGGGCCTGGGCTGATCGTCCCTGGCCGCTaGACTGGCTTCTTGGTAGGT +
Preference number: 5 (lower is better)
Translates to: RLHPMAGGLDCKGAGPGLIVPGR*TGFLVG
Trigger: ACCTACCAAGAAGCCAGTCAAGCGGCCAGGGACGAT...CAGCCCAGGCCCTGCCCCTTTACAGTCTAGGCCGCCTGCCATGGGGTGCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp AGGCTGCACCCCATGGCAGGCGGCCTAGACTGTAAAGGGGCAGGGCCTGGGCTGATGAGGCCAGGCAGCTaGTTCTTTGTGCTGGCAGCC +
Preference number: 5 (lower is better)
Translates to: RLHPMAGGLDCKGAGPGLMRPGS*FFVLAA
Trigger: GGCTGCCAGCACAAAGAACAAGCTGCCTGGCCTCAT...CAGCCCAGGCCCTGCCCCTTTACAGTCTAGGCCGCCTGCCATGGGGTGCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp AAAAGCCAAGGTGTGGAGGGACCCCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGCGAAGAGCTGGTCTCTaGGGAGGCCAGCATGGCGCC +
Preference number: 5 (lower is better)
Translates to: KSQGVEGPQASGRVLVRLRRAGL*GGQHGA
Trigger: GGCGCCATGCTGGCCTCCCAAGAGACCAGCTCTTCG...CAGCCGAACCAGCACTCTCCCGGAAGCCTGGGGTCCCTCCACACCTTGGCTTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
CDS-3UTR CAA 90 bp TCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCACCCCTCCTTGTCCCGGAGCTaGACTCCCGGCTGGAACACA +
Preference number: 5 (lower is better)
Translates to: SGCGQRASLTQPLERLHPSLSRS*TPGWNT
Trigger: TGTGTTCCAGCCGGGAGTCAAGCTCCGGGACAAGGA...GGGGTGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp AGGCTGCACCCCATGGCAGGCGGCCTAGACTGTAAAGGGGCAGGGCCTGGGCTGTACTTCTCCGGGTTCTaGGTGAAGGGCACGCTGCCA +
Preference number: 5 (lower is better)
Translates to: RLHPMAGGLDCKGAGPGLYFSGF*VKGTLP
Trigger: TGGCAGCGTGCCCTTCACCAAGAACCCGGAGAAGTA...CAGCCCAGGCCCTGCCCCTTTACAGTCTAGGCCGCCTGCCATGGGGTGCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp AGGCTGCACCCCATGGCAGGCGGCCTAGACTGTAAAGGGGCAGGGCCTGGGCTGTCCATCATCGCTCTCTaGGTGCCTGCAGAGGCACTG +
Preference number: 5 (lower is better)
Translates to: RLHPMAGGLDCKGAGPGLSIIAL*VPAEAL
Trigger: CAGTGCCTCTGCAGGCACCAAGAGAGCGATGATGGA...CAGCCCAGGCCCTGCCCCTTTACAGTCTAGGCCGCCTGCCATGGGGTGCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS GCA 90 bp TCACCCAGGACAGCAACACCCACCGGCCCCGGCCTCTCATCATGGTaGCCCTTTCCACAAGTCACTCGCTCGCACTGGAGCCCAAAGCCA +
Preference number: 5 (lower is better)
Translates to: SPRTATPTGPGLSSW*PFPQVTRSHWSPKP
Trigger: TGGCTTTGGGCTCCAGTGCGAGCGAGTGACTTGTGGAAAGGGGCACCATGATGAGAGGCCGGGGCCGGTGGGTGTTGCTGTCCTGGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405068.3
CDS GCA 90 bp CTGTGCAGGCAGCTGCGCCCACAGGCTGGGCTGGCAGTCCCCATTTaGAGCAGGTTTTGGCTGGTGGGCAGGATTTCCACACTGGAGGGA +
Preference number: 5 (lower is better)
Translates to: LCRQLRPQAGLAVPI*SRFWLVGRISTLEG
Trigger: TCCCTCCAGTGTGGAAATCCTGCCCACCAGCCAAAACCTGCTGCAAATGGGGACTGCCAGCCCAGCCTGTGGGCGCAGCTGCCTGCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405068.3
CDS-3UTR CAA 90 bp GGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGAAATCGCTCTGCGCCAGCTaGACGAAGGCACTGACGCAG +
Preference number: 5 (lower is better)
Translates to: GAELLLRTPPAVCWTLGKSLCAS*TKALTQ
Trigger: CTGCGTCAGTGCCTTCGTCAAGCTGGCGCAGAGCGA...TTTCCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp TCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCACCCCATGAGGCCAGGCAGCTaGTTCTTTGTGCTGGCAGCC +
Preference number: 5 (lower is better)
Translates to: SGCGQRASLTQPLERLHPMRPGS*FFVLAA
Trigger: GGCTGCCAGCACAAAGAACAAGCTGCCTGGCCTCAT...GGGGTGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp TCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCACCCCAAGTCCTCCAGCGCTTaGGCACCGATGGTCTCCATG +
Preference number: 5 (lower is better)
Translates to: SGCGQRASLTQPLERLHPKSSSA*APMVSM
Trigger: CATGGAGACCATCGGTGCCAAAGCGCTGGAGGACTT...GGGGTGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp AGGCTGCACCCCATGGCAGGCGGCCTAGACTGTAAAGGGGCAGGGCCTGGGCTGAGGAAGAGGATGGCATaGCTGGTGAGCTCGTGTACG +
Preference number: 5 (lower is better)
Translates to: RLHPMAGGLDCKGAGPGLRKRMA*LVSSCT
Trigger: CGTACACGAGCTCACCAGCAATGCCATCCTCTTCCT...CAGCCCAGGCCCTGCCCCTTTACAGTCTAGGCCGCCTGCCATGGGGTGCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp GCTGAACTCAGAGCTGTAGCTGGTGGCCGAAGAGCTGGTCTCTTGGGAGGCCAGCGAAGAGCTGGTCTCTaGGGAGGCCAGCATGGCGCC +
Preference number: 5 (lower is better)
Translates to: AELRAVAGGRRAGLLGGQRRAGL*GGQHGA
Trigger: GGCGCCATGCTGGCCTCCCAAGAGACCAGCTCTTCG...CTGGCCTCCCAAGAGACCAGCTCTTCGGCCACCAGCTACAGCTCTGAGTTCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592559.1
CDS-3UTR CAA 90 bp GGTGGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGTCTCTCCCTGGCCGCTaGACTGGCTTCTTGGTAGGT +
Preference number: 5 (lower is better)
Translates to: GGAELLLRTPPAVCWTLGSLPGR*TGFLVG
Trigger: ACCTACCAAGAAGCCAGTCAAGCGGCCAGGGAGAGA...CCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332065.9
CDS-3UTR CAA 90 bp GGGACACAGCTCCCGGAGGCGTGGAGACAGGTCTCTGTCCCAGAGGACTTCAAGTGTGTCCCCAAGAACTaGGGAGGCCAGCATGGCGCC +
Preference number: 5 (lower is better)
Translates to: GTQLPEAWRQVSVPEDFKCVPKN*GGQHGA
Trigger: GGCGCCATGCTGGCCTCCCAAGTTCTTGGGGACACA...CTTGAAGTCCTCTGGGACAGAGACCTGTCTCCACGCCTCCGGGAGCTGTGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607838.5
CDS TCA 90 bp CAGAGGACAGGAGTTCCCCGTGACCGACTCTGTGTCCTGAGGTGCTaGGAAGGAAGAGTGCGTGGTGGCACAGGGGCCCATGCAGGAGCA +
Preference number: 5 (lower is better)
Translates to: QRTGVPRDRLCVLRC*EGRVRGGTGAHAGA
Trigger: TGCTCCTGCATGGGCCCCTGTGCCACCACGCACTCTTCCTTCTCAGCACCTCAGGACACAGAGTCGGTCACGGGGAACTCCTGTCCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494787.6
CDS CCA 90 bp TGTTCACCCAGGACAGCAACACCCACCGGCCCCGGCCTCTCATCATaGTGCCCCTTTCCACAAGTCACTCGCTCGCACTGGAGCCCAAAG +
Preference number: 5 (lower is better)
Translates to: CSPRTATPTGPGLSS*CPFPQVTRSHWSPK
Trigger: CTTTGGGCTCCAGTGCGAGCGAGTGACTTGTGGAAAGGGGCACCATGATGAGAGGCCGGGGCCGGTGGGTGTTGCTGTCCTGGGTGAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405068.3
CDS CCA 90 bp GCTGCATGGCCAGCGGGCACTCTTAAGGCAGTGCAAATAGGGCTCTaGGGCTTCTGGGGGACCTGTCAGGGAGCCAGGCAGAAGAGGAAG +
Preference number: 5 (lower is better)
Translates to: AAWPAGTLKAVQIGL*GFWGTCQGARQKRK
Trigger: CTTCCTCTTCTGCCTGGCTCCCTGACAGGTCCCCCAGAAGCCCCAGAGCCCTATTTGCACTGCCTTAAGAGTGCCCGCTGGCCATGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405068.3
CDS CCA 90 bp GGTGCTTCACCACCTGGGAGGCCTCCCTGTCCCTCTCCTCAGAAGTaGGAACCGACATCCCCAGAGCCTGACTCCCTAGAGCCTGACATC +
Preference number: 5 (lower is better)
Translates to: GASPPGRPPCPSPQK*EPTSPEPDSLEPDI
Trigger: GATGTCAGGCTCTAGGGAGTCAGGCTCTGGGGATGTCGGTTCCCACTTCTGAGGAGAGGGACAGGGAGGCCTCCCAGGTGGTGAAGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405068.3
CDS-3UTR CAA 90 bp CCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGAACACGGGCTGTGGGGAAAAATCAGGCTTGGTCTGCTaGAGGTGTCGCAGGATGGGG +
Preference number: 5 (lower is better)
Translates to: PGFRESAGSAGNTGCGEKSGLVC*RCRRMG
Trigger: CCCCATCCTGCGACACCTCAAGCAGACCAAGCCTGA...TTTTTCCCCACAGCCCGTGTTCCCAGCCGAACCAGCACTCTCCCGGAAGCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp AGGCTGCACCCCATGGCAGGCGGCCTAGACTGTAAAGGGGCAGGGCCTGGGCTGCATGTTGAGGGGACCTaGAAGAACAGCTCCTTTCCC +
Preference number: 5 (lower is better)
Translates to: RLHPMAGGLDCKGAGPGLHVEGT*KNSSFP
Trigger: GGGAAAGGAGCTGTTCTTCAAGGTCCCCTCAACATG...CAGCCCAGGCCCTGCCCCTTTACAGTCTAGGCCGCCTGCCATGGGGTGCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp GGGACACAGCTCCCGGAGGCGTGGAGACAGGTCTCTGTCCCAGAGGACTTCAAGCTGCTACCCCCAGACTaGGCAGCTGGGATCTCTCCT +
Preference number: 5 (lower is better)
Translates to: GTQLPEAWRQVSVPEDFKLLPPD*AAGISP
Trigger: AGGAGAGATCCCAGCTGCCAAGTCTGGGGGTAGCAG...CTTGAAGTCCTCTGGGACAGAGACCTGTCTCCACGCCTCCGGGAGCTGTGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR CAA 90 bp GGTGAGCACCGTGGAGAAGTCGTGTCGCACAATGGCCTTCCGGGCAGCAGACACGGGCATCCTGGCCGCTaGACTGGCTTCTTGGTAGGT +
Preference number: 5 (lower is better)
Translates to: GEHRGEVVSHNGLPGSRHGHPGR*TGFLVG
Trigger: ACCTACCAAGAAGCCAGTCAAGCGGCCAGGATGCCC...GTGTCTGCTGCCCGGAAGGCCATTGTGCGACACGACTTCTCCACGGTGCTCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592559.1
CDS TCA 90 bp TTAGGGTCCAGAGGACAGGAGTTCCCCGTGACCGACTCTGTGTCCTaGGGTGCTGAGAAGGAAGAGTGCGTGGTGGCACAGGGGCCCATG +
Preference number: 5 (lower is better)
Translates to: LGSRGQEFPVTDSVS*GAEKEECVVAQGPM
Trigger: CATGGGCCCCTGTGCCACCACGCACTCTTCCTTCTCAGCACCTCAGGACACAGAGTCGGTCACGGGGAACTCCTGTCCTCTGGACCCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494787.6
CDS GCA 90 bp ACCACACAGAAGGCACAGAGCTGCTCCATCCACTGTGCAGGCAGCTaGGCCCACAGGCTGGGCTGGCAGTCCCCATTTGCAGCAGGTTTT +
Preference number: 5 (lower is better)
Translates to: TTQKAQSCSIHCAGS*AHRLGWQSPFAAGF
Trigger: AAAACCTGCTGCAAATGGGGACTGCCAGCCCAGCCTGTGGGCGCAGCTGCCTGCACAGTGGATGGAGCAGCTCTGTGCCTTCTGTGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405068.3
CDS-3UTR CAA 90 bp GGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGAAATCCTCCTGCTTCAGCTaGTCCTCAATCTCCCGCCGT +
Preference number: 5 (lower is better)
Translates to: GAELLLRTPPAVCWTLGKSSCFS*SSISRR
Trigger: ACGGCGGGAGATTGAGGACAAGCTGAAGCAGGAGGA...TTTCCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp GGAATCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCATCCTCCTGCTTCAGCTaGTCCTCAATCTCCCGCCGT +
Preference number: 5 (lower is better)
Translates to: GIWMWAACKSDAAPGEAASSCFS*SSISRR
Trigger: ACGGCGGGAGATTGAGGACAAGCTGAAGCAGGAGGA...TGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGATTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp TCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCACCCCAGATTCTCCGTCTGCTaGTGCACAGGGATGATGGAG +
Preference number: 5 (lower is better)
Translates to: SGCGQRASLTQPLERLHPRFSVC*CTGMME
Trigger: CTCCATCATCCCTGTGCACAAGCAGACGGAGAATCT...GGGGTGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp AAGCCAAGGTGTGGAGGGACCCCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGAGATTCTCCGTCTGCTaGTGCACAGGGATGATGGAG +
Preference number: 5 (lower is better)
Translates to: KPRCGGTPGFRESAGSAGRFSVC*CTGMME
Trigger: CTCCATCATCCCTGTGCACAAGCAGACGGAGAATCT...CCCAGCCGAACCAGCACTCTCCCGGAAGCCTGGGGTCCCTCCACACCTTGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp GGGACACAGCTCCCGGAGGCGTGGAGACAGGTCTCTGTCCCAGAGGACTTCAAGATCGTCCCTGGCCGCTaGACTGGCTTCTTGGTAGGT +
Preference number: 5 (lower is better)
Translates to: GTQLPEAWRQVSVPEDFKIVPGR*TGFLVG
Trigger: ACCTACCAAGAAGCCAGTCAAGCGGCCAGGGACGAT...CTTGAAGTCCTCTGGGACAGAGACCTGTCTCCACGCCTCCGGGAGCTGTGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp CTTGAGGTGTCGCAGGATGGGGAAGACGGTGAGCACCGTGGAGAAGTCGTGTCGTCAGGCTTGGTCTGCTaGAGGTGTCGCAGGATGGGG +
Preference number: 5 (lower is better)
Translates to: LEVSQDGEDGEHRGEVVSSGLVC*RCRRMG
Trigger: CCCCATCCTGCGACACCTCAAGCAGACCAAGCCTGA...CGACACGACTTCTCCACGGTGCTCACCGTCTTCCCCATCCTGCGACACCTCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592559.1
CDS-3UTR CAA 90 bp GGAATCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCAATGAGGCCAGGCAGCTaGTTCTTTGTGCTGGCAGCC +
Preference number: 5 (lower is better)
Translates to: GIWMWAACKSDAAPGEAAMRPGS*FFVLAA
Trigger: GGCTGCCAGCACAAAGAACAAGCTGCCTGGCCTCAT...TGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGATTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp GGAATCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCAAAGTCCTCCAGCGCTTaGGCACCGATGGTCTCCATG +
Preference number: 5 (lower is better)
Translates to: GIWMWAACKSDAAPGEAAKSSSA*APMVSM
Trigger: CATGGAGACCATCGGTGCCAAAGCGCTGGAGGACTT...TGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGATTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp GGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGAAAAAGTCCTCCAGCGCTTaGGCACCGATGGTCTCCATG +
Preference number: 5 (lower is better)
Translates to: GAELLLRTPPAVCWTLGKKSSSA*APMVSM
Trigger: CATGGAGACCATCGGTGCCAAAGCGCTGGAGGACTT...TTTCCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp AGGCTGCACCCCATGGCAGGCGGCCTAGACTGTAAAGGGGCAGGGCCTGGGCTGGGCATGTTGTACTCCTaGTCCGGGTCATTCTTGATG +
Preference number: 5 (lower is better)
Translates to: RLHPMAGGLDCKGAGPGLGMLYS*SGSFLM
Trigger: CATCAAGAATGACCCGGACAAGGAGTACAACATGCC...CAGCCCAGGCCCTGCCCCTTTACAGTCTAGGCCGCCTGCCATGGGGTGCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp CTCAGGGACACAGCTCCCGGAGGCGTGGAGACAGGTCTCTGTCCCAGAGGACTTCCGTCCTTCGGCATGTaGTACTCCTTGTCCGGGTCA +
Preference number: 5 (lower is better)
Translates to: LRDTAPGGVETGLCPRGLPSFGM*YSLSGS
Trigger: TGACCCGGACAAGGAGTACAACATGCCGAAGGACGG...AAGTCCTCTGGGACAGAGACCTGTCTCCACGCCTCCGGGAGCTGTGTCCCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp CTCAGAGCTGTAGCTGGTGGCCGAAGAGCTGGTCTCTTGGGAGGCCAGCATGGCCCGTCCTTCGGCATGTaGTACTCCTTGTCCGGGTCA +
Preference number: 5 (lower is better)
Translates to: LRAVAGGRRAGLLGGQHGPSFGM*YSLSGS
Trigger: TGACCCGGACAAGGAGTACAACATGCCGAAGGACGG...GCCATGCTGGCCTCCCAAGAGACCAGCTCTTCGGCCACCAGCTACAGCTCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592559.1
CDS-3UTR CAA 90 bp CCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGAACACGGGCTGTGGGGAAAAACCGTCCTTCGGCATGTaGTACTCCTTGTCCGGGTCA +
Preference number: 5 (lower is better)
Translates to: PGFRESAGSAGNTGCGEKPSFGM*YSLSGS
Trigger: TGACCCGGACAAGGAGTACAACATGCCGAAGGACGG...TTTTTCCCCACAGCCCGTGTTCCCAGCCGAACCAGCACTCTCCCGGAAGCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp AAAAGCCAAGGTGTGGAGGGACCCCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGATAATCTGCCGCTCCTaGTCCCGGAGCTTGACTCCC +
Preference number: 5 (lower is better)
Translates to: KSQGVEGPQASGRVLVRLIICRS*SRSLTP
Trigger: GGGAGTCAAGCTCCGGGACAAGGAGCGGCAGATTAT...CAGCCGAACCAGCACTCTCCCGGAAGCCTGGGGTCCCTCCACACCTTGGCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp GGGACACAGCTCCCGGAGGCGTGGAGACAGGTCTCTGTCCCAGAGGACTTCAAGATAATCTGCCGCTCCTaGTCCCGGAGCTTGACTCCC +
Preference number: 5 (lower is better)
Translates to: GTQLPEAWRQVSVPEDFKIICRS*SRSLTP
Trigger: GGGAGTCAAGCTCCGGGACAAGGAGCGGCAGATTAT...CTTGAAGTCCTCTGGGACAGAGACCTGTCTCCACGCCTCCGGGAGCTGTGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp GGGACACAGCTCCCGGAGGCGTGGAGACAGGTCTCTGTCCCAGAGGACTTCAAGTACTTCTCCGGGTTCTaGGTGAAGGGCACGCTGCCA +
Preference number: 5 (lower is better)
Translates to: GTQLPEAWRQVSVPEDFKYFSGF*VKGTLP
Trigger: TGGCAGCGTGCCCTTCACCAAGAACCCGGAGAAGTA...CTTGAAGTCCTCTGGGACAGAGACCTGTCTCCACGCCTCCGGGAGCTGTGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp GGGACACAGCTCCCGGAGGCGTGGAGACAGGTCTCTGTCCCAGAGGACTTCAAGTCTGCCCTGCTGCTCTaGGTACACATGGAGCAGCAG +
Preference number: 5 (lower is better)
Translates to: GTQLPEAWRQVSVPEDFKSALLL*VHMEQQ
Trigger: CTGCTGCTCCATGTGTACCAAGAGCAGCAGGGCAGA...CTTGAAGTCCTCTGGGACAGAGACCTGTCTCCACGCCTCCGGGAGCTGTGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS GCA 90 bp TCGAGCTGCGGGCAGCATCTCTCAGTGGCCAGACATAGCCGGGCTTaGCAAGCTGTGGCTGGCAGAGACACTGTTTACCTGGAGCACAGA +
Preference number: 5 (lower is better)
Translates to: SSCGQHLSVARHSRA*QAVAGRDTVYLEHR
Trigger: TCTGTGCTCCAGGTAAACAGTGTCTCTGCCAGCCACAGCTTGGCAAGCCCGGCTATGTCTGGCCACTGAGAGATGCTGCCCGCAGCTCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405068.3
CDS CCA 90 bp CAGAACATCCCAGCACATCATCGAGCTGCGGGCAGCATCTCTCAGTaGCCAGACATAGCCGGGCTTGCCAAGCTGTGGCTGGCAGAGACA +
Preference number: 5 (lower is better)
Translates to: QNIPAHHRAAGSISQ*PDIAGLAKLWLAET
Trigger: TGTCTCTGCCAGCCACAGCTTGGCAAGCCCGGCTATGTCTGGCCACTGAGAGATGCTGCCCGCAGCTCGATGATGTGCTGGGATGTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405068.3
CDS CCA 90 bp GGTGCCGTCCTTCGGCATGTTGTACTCCTTGTCCGGGTCATTCTGTaGAAAAACAGCCTCTGGTTCCCTGAAGCAGCCCCCAGCCCACCC +
Preference number: 5 (lower is better)
Translates to: GAVLRHVVLLVRVIL*KNSLWFPEAAPSPP
Trigger: GGGTGGGCTGGGGGCTGCTTCAGGGAACCAGAGGCTGTTTTTCCACAGAATGACCCGGACAAGGAGTACAACATGCCGAAGGACGGCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000467586.5
CDS-3UTR CAA 90 bp AGGCTGCACCCCATGGCAGGCGGCCTAGACTGTAAAGGGGCAGGGCCTGGGCTGAAGAGCAGTTTCACTTaGTTGAGTTCCGGGCTGTCT +
Preference number: 5 (lower is better)
Translates to: RLHPMAGGLDCKGAGPGLKSSFT*LSSGLS
Trigger: AGACAGCCCGGAACTCAACAAAGTGAAACTGCTCTT...CAGCCCAGGCCCTGCCCCTTTACAGTCTAGGCCGCCTGCCATGGGGTGCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp TTTTCCCCATTGTCCCTGTCTCCCAGCCCACAGGCAGGCAGCCTAATTGCTCCTTCGCTCTGCGCCAGCTaGACGAAGGCACTGACGCAG +
Preference number: 5 (lower is better)
Translates to: FSPLSLSPSPQAGSLIAPSLCAS*TKALTQ
Trigger: CTGCGTCAGTGCCTTCGTCAAGCTGGCGCAGAGCGA...AGGAGCAATTAGGCTGCCTGCCTGTGGGCTGGGAGACAGGGACAATGGGGAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp CCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGAACACGGGCTGTGGGGAAAAATGGTCAAACTCAGGCTaGGTCTGCTTGAGGTGTCGC +
Preference number: 5 (lower is better)
Translates to: PGFRESAGSAGNTGCGEKWSNSG*VCLRCR
Trigger: GCGACACCTCAAGCAGACCAAGCCTGAGTTTGACCA...TTTTTCCCCACAGCCCGTGTTCCCAGCCGAACCAGCACTCTCCCGGAAGCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp GGTGAGCACCGTGGAGAAGTCGTGTCGCACAATGGCCTTCCGGGCAGCAGACACTGGTCAAACTCAGGCTaGGTCTGCTTGAGGTGTCGC +
Preference number: 5 (lower is better)
Translates to: GEHRGEVVSHNGLPGSRHWSNSG*VCLRCR
Trigger: GCGACACCTCAAGCAGACCAAGCCTGAGTTTGACCA...GTGTCTGCTGCCCGGAAGGCCATTGTGCGACACGACTTCTCCACGGTGCTCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592559.1
CDS-3UTR CAA 90 bp AGGCTTGGTCTGCTTGAGGTGTCGCAGGATGGGGAAGACGGTGAGCACCGTGGAATGAGGCCAGGCAGCTaGTTCTTTGTGCTGGCAGCC +
Preference number: 5 (lower is better)
Translates to: RLGLLEVSQDGEDGEHRGMRPGS*FFVLAA
Trigger: GGCTGCCAGCACAAAGAACAAGCTGCCTGGCCTCAT...TCCACGGTGCTCACCGTCTTCCCCATCCTGCGACACCTCAAGCAGACCAAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592559.1
CDS-3UTR CAA 90 bp CTTGAGGTGTCGCAGGATGGGGAAGACGGTGAGCACCGTGGAGAAGTCGTGTCGAAGTCCTCCAGCGCTTaGGCACCGATGGTCTCCATG +
Preference number: 5 (lower is better)
Translates to: LEVSQDGEDGEHRGEVVSKSSSA*APMVSM
Trigger: CATGGAGACCATCGGTGCCAAAGCGCTGGAGGACTT...CGACACGACTTCTCCACGGTGCTCACCGTCTTCCCCATCCTGCGACACCTCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592559.1
CDS-3UTR CAA 90 bp GGTGGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGTTGTCCGGGTCATTCTaGATGTTGTCTGCGAAGTCC +
Preference number: 5 (lower is better)
Translates to: GGAELLLRTPPAVCWTLGLSGSF*MLSAKS
Trigger: GGACTTCGCAGACAACATCAAGAATGACCCGGACAA...CCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp AAAAGCCAAGGTGTGGAGGGACCCCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGAGGAAGAGGATGGCATaGCTGGTGAGCTCGTGTACG +
Preference number: 5 (lower is better)
Translates to: KSQGVEGPQASGRVLVRLRKRMA*LVSSCT
Trigger: CGTACACGAGCTCACCAGCAATGCCATCCTCTTCCT...CAGCCGAACCAGCACTCTCCCGGAAGCCTGGGGTCCCTCCACACCTTGGCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp CCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGAACACGGGCTGTGGGGAAAAATGCTCCACCCCGTACTaGATGTACTTCTCCGGGTTC +
Preference number: 5 (lower is better)
Translates to: PGFRESAGSAGNTGCGEKCSTPY*MYFSGF
Trigger: GAACCCGGAGAAGTACATCAAGTACGGGGTGGAGCA...TTTTTCCCCACAGCCCGTGTTCCCAGCCGAACCAGCACTCTCCCGGAAGCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp GGGACACAGCTCCCGGAGGCGTGGAGACAGGTCTCTGTCCCAGAGGACTTCAAGTGCTCCACCCCGTACTaGATGTACTTCTCCGGGTTC +
Preference number: 5 (lower is better)
Translates to: GTQLPEAWRQVSVPEDFKCSTPY*MYFSGF
Trigger: GAACCCGGAGAAGTACATCAAGTACGGGGTGGAGCA...CTTGAAGTCCTCTGGGACAGAGACCTGTCTCCACGCCTCCGGGAGCTGTGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp CTCAGGGACACAGCTCCCGGAGGCGTGGAGACAGGTCTCTGTCCCAGAGGACTTTGCTCCACCCCGTACTaGATGTACTTCTCCGGGTTC +
Preference number: 5 (lower is better)
Translates to: LRDTAPGGVETGLCPRGLCSTPY*MYFSGF
Trigger: GAACCCGGAGAAGTACATCAAGTACGGGGTGGAGCA...AAGTCCTCTGGGACAGAGACCTGTCTCCACGCCTCCGGGAGCTGTGTCCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS GCA 90 bp CTAGATTGGACTAAAGCAGTACAGTCCCAGTCAGCCTCTGGCTGTTaGAGAGATGGGCCAGGATGGGGGCTCACCTGGCCGCTTGACTGG +
Preference number: 5 (lower is better)
Translates to: LDWTKAVQSQSASGC*RDGPGWGLTWPLDW
Trigger: CCAGTCAAGCGGCCAGGTGAGCCCCCATCCTGGCCCATCTCTGCAACAGCCAGAGGCTGACTGGGACTGTACTGCTTTAGTCCAATCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405068.3
CDS GCA 90 bp GTGAAGGTTGGAGCACCTATCCCCTTGCTATCCCAGCATCCTGGCTaGAGTAGTGTGCCTGGCCTTCTGACAGGGCGACGTGTGTGTGAG +
Preference number: 5 (lower is better)
Translates to: VKVGAPIPLLSQHPG*SSVPGLLTGRRVCE
Trigger: CTCACACACACGTCGCCCTGTCAGAAGGCCAGGCACACTACTGCAGCCAGGATGCTGGGATAGCAAGGGGATAGGTGCTCCAACCTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405068.3
CDS GCA 90 bp GGATGGATGTGGTCCACTGTGAGCCACCTGAGATCAGATCCCTCCTaGCTGAAAGGCCAGGTAGCTGCATGGCCAGCGGGCACTCTTAAG +
Preference number: 5 (lower is better)
Translates to: GWMWSTVSHLRSDPS*LKGQVAAWPAGTLK
Trigger: CTTAAGAGTGCCCGCTGGCCATGCAGCTACCTGGCCTTTCAGGCAGGAGGGATCTGATCTCAGGTGGCTCACAGTGGACCACATCCATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405068.3
CDS GCA 90 bp CTGAGCACACCTCAACCCCTCCACAGACTGGAGATACCTCCTCACTaGTACCTGCCCTCTAACCCCATGTCTCCAGGCAAGGAGGCGAGT +
Preference number: 5 (lower is better)
Translates to: LSTPQPLHRLEIPPH*YLPSNPMSPGKEAS
Trigger: ACTCGCCTCCTTGCCTGGAGACATGGGGTTAGAGGGCAGGTAGCAGTGAGGAGGTATCTCCAGTCTGTGGAGGGGTTGAGGTGTGCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486053.1
CDS-3UTR CAA 90 bp GGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGAAAAGATTCTCCGTCTGCTaGTGCACAGGGATGATGGAG +
Preference number: 5 (lower is better)
Translates to: GAELLLRTPPAVCWTLGKRFSVC*CTGMME
Trigger: CTCCATCATCCCTGTGCACAAGCAGACGGAGAATCT...TTTCCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp CTCAGGGACACAGCTCCCGGAGGCGTGGAGACAGGTCTCTGTCCCAGAGGACTTAGCAGTTTCACTTTGTaGAGTTCCGGGCTGTCTGGG +
Preference number: 5 (lower is better)
Translates to: LRDTAPGGVETGLCPRGLSSFTL*SSGLSG
Trigger: CCCAGACAGCCCGGAACTCAACAAAGTGAAACTGCT...AAGTCCTCTGGGACAGAGACCTGTCTCCACGCCTCCGGGAGCTGTGTCCCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp GGGACACAGCTCCCGGAGGCGTGGAGACAGGTCTCTGTCCCAGAGGACTTCAAGAGCAGTTTCACTTTGTaGAGTTCCGGGCTGTCTGGG +
Preference number: 5 (lower is better)
Translates to: GTQLPEAWRQVSVPEDFKSSFTL*SSGLSG
Trigger: CCCAGACAGCCCGGAACTCAACAAAGTGAAACTGCT...CTTGAAGTCCTCTGGGACAGAGACCTGTCTCCACGCCTCCGGGAGCTGTGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp CCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGAACACGGGCTGTGGGGAAAAAAGCAGTTTCACTTTGTaGAGTTCCGGGCTGTCTGGG +
Preference number: 5 (lower is better)
Translates to: PGFRESAGSAGNTGCGEKSSFTL*SSGLSG
Trigger: CCCAGACAGCCCGGAACTCAACAAAGTGAAACTGCT...TTTTTCCCCACAGCCCGTGTTCCCAGCCGAACCAGCACTCTCCCGGAAGCCTGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp TCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCACCCCAAGAGCAGTTTCACTTaGTTGAGTTCCGGGCTGTCT +
Preference number: 5 (lower is better)
Translates to: SGCGQRASLTQPLERLHPKSSFT*LSSGLS
Trigger: AGACAGCCCGGAACTCAACAAAGTGAAACTGCTCTT...GGGGTGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp GGTGGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGAAGAGCAGTTTCACTTaGTTGAGTTCCGGGCTGTCT +
Preference number: 5 (lower is better)
Translates to: GGAELLLRTPPAVCWTLGKSSFT*LSSGLS
Trigger: AGACAGCCCGGAACTCAACAAAGTGAAACTGCTCTT...CCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp CATGTTGAGGGGACCTTGAAGAACAGCTCCTTTCCCTGTATCTCTCCCCACAGACAGGCAGGCCGCCCCTaGGGGTACAGGGAAGAAGCC +
Preference number: 5 (lower is better)
Translates to: HVEGTLKNSSFPCISPHRQAGRP*GYREEA
Trigger: GGCTTCTTCCCTGTACCCCAAGGGGCGGCCTGCCTG...TCTGTGGGGAGAGATACAGGGAAAGGAGCTGTTCTTCAAGGTCCCCTCAACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000335146.11
CDS-3UTR CAA 90 bp CAGCCCAGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGCGAAGAGCTGGTCTCTaGGGAGGCCAGCATGGCGCC +
Preference number: 5 (lower is better)
Translates to: QPRGKLTLVYLSNDTPVWRRAGL*GGQHGA
Trigger: GGCGCCATGCTGGCCTCCCAAGAGACCAGCTCTTCG...CCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCTGGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
CDS-3UTR CAA 90 bp CTCAGGGACACAGCTCCCGGAGGCGTGGAGACAGGTCTCTGTCCCAGAGGACTTCTTAACTTTTCCCCATaGTCCCTGTCTCCCAGCCCA +
Preference number: 5 (lower is better)
Translates to: LRDTAPGGVETGLCPRGLLNFSP*SLSPSP
Trigger: TGGGCTGGGAGACAGGGACAATGGGGAAAAGTTAAG...AAGTCCTCTGGGACAGAGACCTGTCTCCACGCCTCCGGGAGCTGTGTCCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp GGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGAAACTTAACTTTTCCCCATaGTCCCTGTCTCCCAGCCCA +
Preference number: 5 (lower is better)
Translates to: GAELLLRTPPAVCWTLGKLNFSP*SLSPSP
Trigger: TGGGCTGGGAGACAGGGACAATGGGGAAAAGTTAAG...TTTCCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp GGAATCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCAGCACCCAATTCGTCTTaGCAGGAATCTGGATGTGGG +
Preference number: 5 (lower is better)
Translates to: GIWMWAACKSDAAPGEAAAPNSS*QESGCG
Trigger: CCCACATCCAGATTCCTGCAAAGACGAATTGGGTGC...TGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGATTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp CCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGAACACGGGCTGTGGGGAAAAACATGTTGAGGGGACCTaGAAGAACAGCTCCTTTCCC +
Preference number: 5 (lower is better)
Translates to: PGFRESAGSAGNTGCGEKHVEGT*KNSSFP
Trigger: GGGAAAGGAGCTGTTCTTCAAGGTCCCCTCAACATG...TTTTTCCCCACAGCCCGTGTTCCCAGCCGAACCAGCACTCTCCCGGAAGCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp AGGCTGCACCCCATGGCAGGCGGCCTAGACTGTAAAGGGGCAGGGCCTGGGCTGGTTGCAAAACAAGGTTaGGGAAGCCCTTCTATGGAT +
Preference number: 5 (lower is better)
Translates to: RLHPMAGGLDCKGAGPGLVAKQG*GSPSMD
Trigger: ATCCATAGAAGGGCTTCCCAAACCTTGTTTTGCAAC...CAGCCCAGGCCCTGCCCCTTTACAGTCTAGGCCGCCTGCCATGGGGTGCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS TCA 90 bp AGGGCACGCTGCCAAACTTCTGTAGAAAGGCCCCGTAGGTCTCCTTaGCAATGGTCTTCTGGGCCTGGCGAATCCTGTCCCTCTGCTCTG +
Preference number: 5 (lower is better)
Translates to: RARCQTSVERPRRSP*QWSSGPGESCPSAL
Trigger: CAGAGCAGAGGGACAGGATTCGCCAGGCCCAGAAGACCATTGTCAAGGAGACCTACGGGGCCTTTCTACAGAAGTTTGGCAGCGTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000411744.6
ENST00000465252.5
ENST00000467586.5
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
ENST00000634349.1
CDS TCA 90 bp CCGTCTGCCAGACACCCCTTCCCAGCCCAGGTCTTGAGCCCACCTTaGCTCCCGGCTGGAACACAGGTAGATTCTTCTCTGCGATGTAAT +
Preference number: 5 (lower is better)
Translates to: PSARHPFPAQVLSPP*LPAGTQVDSSLRCN
Trigger: ATTACATCGCAGAGAAGAATCTACCTGTGTTCCAGCCGGGAGTCAAGGTGGGCTCAAGACCTGGGCTGGGAAGGGGTGTCTGGCAGACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465252.5
CDS GCA 90 bp GGCCTGGCTCACGTCTCCCTTGCTCATGCTCTCCCCTTCAGCGAGTaGGGCTTACTAATGAGTGAATCTGATTCCTGCCCCACAACCCAC +
Preference number: 5 (lower is better)
Translates to: GLAHVSLAHALPFSE*GLLMSESDSCPTTH
Trigger: GTGGGTTGTGGGGCAGGAATCAGATTCACTCATTAGTAAGCCGCACTCGCTGAAGGGGAGAGCATGAGCAAGGGAGACGTGAGCCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405068.3
CDS CCA 90 bp CACGACGACAAGCTCTGGAGGGGCCTGACGCTGCGAACGCTAGATTaGACTAAAGCAGTACAGTCCCAGTCAGCCTCTGGCTGTTGCAGA +
Preference number: 5 (lower is better)
Translates to: HDDKLWRGLTLRTLD*TKAVQSQSASGCCR
Trigger: TCTGCAACAGCCAGAGGCTGACTGGGACTGTACTGCTTTAGTCCAATCTAGCGTTCGCAGCGTCAGGCCCCTCCAGAGCTTGTCGTCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405068.3
CDS-3UTR CAA 90 bp TTTTCCCCATTGTCCCTGTCTCCCAGCCCACAGGCAGGCAGCCTAATTGCTCCTTCCTCCTGCTTCAGCTaGTCCTCAATCTCCCGCCGT +
Preference number: 5 (lower is better)
Translates to: FSPLSLSPSPQAGSLIAPSSCFS*SSISRR
Trigger: ACGGCGGGAGATTGAGGACAAGCTGAAGCAGGAGGA...AGGAGCAATTAGGCTGCCTGCCTGTGGGCTGGGAGACAGGGACAATGGGGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp CTCAGAGCTGTAGCTGGTGGCCGAAGAGCTGGTCTCTTGGGAGGCCAGCATGGCTTGTCCGGGTCATTCTaGATGTTGTCTGCGAAGTCC +
Preference number: 5 (lower is better)
Translates to: LRAVAGGRRAGLLGGQHGLSGSF*MLSAKS
Trigger: GGACTTCGCAGACAACATCAAGAATGACCCGGACAA...GCCATGCTGGCCTCCCAAGAGACCAGCTCTTCGGCCACCAGCTACAGCTCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592559.1
CDS-3UTR CAA 90 bp GGAATCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCATTGTCCGGGTCATTCTaGATGTTGTCTGCGAAGTCC +
Preference number: 5 (lower is better)
Translates to: GIWMWAACKSDAAPGEAALSGSF*MLSAKS
Trigger: GGACTTCGCAGACAACATCAAGAATGACCCGGACAA...TGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp CCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGGGAACACGGGCTGTGGGGAAAAAGGCATGTTGTACTCCTaGTCCGGGTCATTCTTGATG +
Preference number: 5 (lower is better)
Translates to: PGFRESAGSAGNTGCGEKGMLYS*SGSFLM
Trigger: CATCAAGAATGACCCGGACAAGGAGTACAACATGCC...TTTTTCCCCACAGCCCGTGTTCCCAGCCGAACCAGCACTCTCCCGGAAGCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp GTGTCGCAGGATGGGGAAGACGGTGAGCACCGTGGAGAAGTCGTGTCGCACAATAGGAAGAGGATGGCATaGCTGGTGAGCTCGTGTACG +
Preference number: 5 (lower is better)
Translates to: VSQDGEDGEHRGEVVSHNRKRMA*LVSSCT
Trigger: CGTACACGAGCTCACCAGCAATGCCATCCTCTTCCT...ATTGTGCGACACGACTTCTCCACGGTGCTCACCGTCTTCCCCATCCTGCGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592559.1
CDS-3UTR CAA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGCGAAGAGCTGGTCTCTaGGGAGGCCAGCATGGCGCC +
Preference number: 5 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQRRAGL*GGQHGA
Trigger: GGCGCCATGCTGGCCTCCCAAGAGACCAGCTCTTCG...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000405575.8
ENST00000589210.6
CDS-3UTR CAA 90 bp GGAATCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCATCTTCGAGGCCATCATaGAAGCCCTTAAAACGCTCC +
Preference number: 5 (lower is better)
Translates to: GIWMWAACKSDAAPGEAASSRPS*KPLKRS
Trigger: GGAGCGTTTTAAGGGCTTCAATGATGGCCTCGAAGA...TGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp GGCCTGAGACTGCTGACCGCATCTTCTTCCTCGTGTATGTGGTTGGGGTGCTGTTACTTCTCCGGGTTCTaGGTGAAGGGCACGCTGCCA +
Preference number: 5 (lower is better)
Translates to: GLRLLTASSSSCMWLGCCYFSGF*VKGTLP
Trigger: TGGCAGCGTGCCCTTCACCAAGAACCCGGAGAAGTA...ACAGCACCCCAACCACATACACGAGGAAGAAGATGCGGTCAGCAGTCTCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp TTTTCCCCATTGTCCCTGTCTCCCAGCCCACAGGCAGGCAGCCTAATTGCTCCTTCTGCCCTGCTGCTCTaGGTACACATGGAGCAGCAG +
Preference number: 5 (lower is better)
Translates to: FSPLSLSPSPQAGSLIAPSALLL*VHMEQQ
Trigger: CTGCTGCTCCATGTGTACCAAGAGCAGCAGGGCAGA...AGGAGCAATTAGGCTGCCTGCCTGTGGGCTGGGAGACAGGGACAATGGGGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp CAGCCCAGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGTGTCCCCAAGAACTaGGGAGGCCAGCATGGCGCC +
Preference number: 5 (lower is better)
Translates to: QPRGKLTLVYLSNDTPVWCVPKN*GGQHGA
Trigger: GGCGCCATGCTGGCCTCCCAAGTTCTTGGGGACACA...CCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCTGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467929.6
ENST00000607838.5
CDS GCA 90 bp TGCCTGTTTCTCCAAACCCTAAACAAAGGCCTGCAGGGGAGCGGGTaGTCTTGTGGAACAGACACCTCACTCTCTGAGGGGCATGAGCAG +
Preference number: 5 (lower is better)
Translates to: CLFLQTLNKGLQGSG*SCGTDTSLSEGHEQ
Trigger: CTGCTCATGCCCCTCAGAGAGTGAGGTGTCTGTTCCACAAGAGCACCCGCTCCCCTGCAGGCCTTTGTTTAGGGTTTGGAGAAACAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405068.3
CDS CCA 90 bp GGCAGCATCTCTCAGTGGCCAGACATAGCCGGGCTTGCCAAGCTGTaGCTGGCAGAGACACTGTTTACCTGGAGCACAGACTATAAGGGA +
Preference number: 5 (lower is better)
Translates to: GSISQWPDIAGLAKL*LAETLFTWSTDYKG
Trigger: TCCCTTATAGTCTGTGCTCCAGGTAAACAGTGTCTCTGCCAGCCACAGCTTGGCAAGCCCGGCTATGTCTGGCCACTGAGAGATGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405068.3
CDS-3UTR CAA 90 bp AAAAGCCAAGGTGTGGAGGGACCCCAGGCTTCCGGGAGAGTGCTGGTTCGGCTGAAGAGCAGTTTCACTTaGTTGAGTTCCGGGCTGTCT +
Preference number: 5 (lower is better)
Translates to: KSQGVEGPQASGRVLVRLKSSFT*LSSGLS
Trigger: AGACAGCCCGGAACTCAACAAAGTGAAACTGCTCTT...CAGCCGAACCAGCACTCTCCCGGAAGCCTGGGGTCCCTCCACACCTTGGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp GGAATCTGGATGTGGGCAGCGTGCAAGTCTGACGCAGCCCCTGGAGAGGCTGCAGACGTTCATGAAATCTaGGTTGCGGCCATATTCCAC +
Preference number: 5 (lower is better)
Translates to: GIWMWAACKSDAAPGEAADVHEI*VAAIFH
Trigger: GTGGAATATGGCCGCAACCAAGATTTCATGAACGTC...TGCAGCCTCTCCAGGGGCTGCGTCAGACTTGCACGCTGCCCACATCCAGATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp TTTCCCTGTATCTCTCCCCACAGAGCCCTCCAGAGGAGTAAAGGGGTCACAGAGATCGTCCCTGGCCGCTaGACTGGCTTCTTGGTAGGT +
Preference number: 5 (lower is better)
Translates to: FPCISPHRALQRSKGVTEIVPGR*TGFLVG
Trigger: ACCTACCAAGAAGCCAGTCAAGCGGCCAGGGACGAT...CTCTGTGACCCCTTTACTCCTCTGGAGGGCTCTGTGGGGAGAGATACAGGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGTCGCTCTGCGCCAGCTaGACGAAGGCACTGACGCAG +
Preference number: 5 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQSLCAS*TKALTQ
Trigger: CTGCGTCAGTGCCTTCGTCAAGCTGGCGCAGAGCGA...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp CAGCCCAGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTCAGGCTTGGTCTGCTaGAGGTGTCGCAGGATGGGG +
Preference number: 5 (lower is better)
Translates to: QPRGKLTLVYLSNDTPVWSGLVC*RCRRMG
Trigger: CCCCATCCTGCGACACCTCAAGCAGACCAAGCCTGA...CCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCTGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp GCTGAACTCAGAGCTGTAGCTGGTGGCCGAAGAGCTGGTCTCTTGGGAGGCCAGGGCATGTTGTACTCCTaGTCCGGGTCATTCTTGATG +
Preference number: 5 (lower is better)
Translates to: AELRAVAGGRRAGLLGGQGMLYS*SGSFLM
Trigger: CATCAAGAATGACCCGGACAAGGAGTACAACATGCC...CTGGCCTCCCAAGAGACCAGCTCTTCGGCCACCAGCTACAGCTCTGAGTTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592559.1
CDS-3UTR CAA 90 bp TTTCCCTGTATCTCTCCCCACAGAGCCCTCCAGAGGAGTAAAGGGGTCACAGAGCCGTCCTTCGGCATGTaGTACTCCTTGTCCGGGTCA +
Preference number: 5 (lower is better)
Translates to: FPCISPHRALQRSKGVTEPSFGM*YSLSGS
Trigger: TGACCCGGACAAGGAGTACAACATGCCGAAGGACGG...CTCTGTGACCCCTTTACTCCTCTGGAGGGCTCTGTGGGGAGAGATACAGGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp GGCCTGAGACTGCTGACCGCATCTTCTTCCTCGTGTATGTGGTTGGGGTGCTGTTGCTCCACCCCGTACTaGATGTACTTCTCCGGGTTC +
Preference number: 5 (lower is better)
Translates to: GLRLLTASSSSCMWLGCCCSTPY*MYFSGF
Trigger: GAACCCGGAGAAGTACATCAAGTACGGGGTGGAGCA...ACAGCACCCCAACCACATACACGAGGAAGAAGATGCGGTCAGCAGTCTCAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp GCAAGTGTGCCTCAAGGGTCAGTCTTCAATCTCGTCCTAAATAGGTGGGGCCCTCTGCTACCCCCAGACTaGGCAGCTGGGATCTCTCCT +
Preference number: 5 (lower is better)
Translates to: ASVPQGSVFNLVLNRWGPLLPPD*AAGISP
Trigger: AGGAGAGATCCCAGCTGCCAAGTCTGGGGGTAGCAG...AGGGCCCCACCTATTTAGGACGAGATTGAAGACTGACCCTTGAGGCACACTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR CAA 90 bp GGGGCGGAACTCCTCCTCCGAACGCCTCCTGCAGTGTGCTGGACTCTAGGGAAATTCTATGGATCGGTTTaGTGTCCAAGTCTGTCCCTG +
Preference number: 5 (lower is better)
Translates to: GAELLLRTPPAVCWTLGKFYGSV*CPSLSL
Trigger: CAGGGACAGACTTGGACACAAAACCGATCCATAGAA...TTTCCCTAGAGTCCAGCACACTGCAGGAGGCGTTCGGAGGAGGAGTTCCGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR CAA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAGCCCAGCACTTTACCTaGGGAGGCCAGCATGGCGCC +
Preference number: 5 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQAAQHFT*GGQHGA
Trigger: GGCGCCATGCTGGCCTCCCAAGGTAAAGTGCTGGGC...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357231.8
CDS GCA 90 bp GAGACCAGGGCAGAGACTGATATCCCCAAGCTTCTCACGTTATTCTaGGGACCCCTTACCACTTTGTTGAGTTCCGGGCTGTCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: ETRAETDIPKLLTLF*GPLTTLLSSGLSGL
Trigger: CAGCCCAGACAGCCCGGAACTCAACAAAGTGGTAAGGGGTCCGCAGAATAACGTGAGAAGCTTGGGGATATCAGTCTCTGCCCTGGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406660.4
CDS CCA 90 bp TCTGTCCTGTGTACCTACAGTCGGGGTTACCACGACGACAAGCTCTaGAGGGGCCTGACGCTGCGAACGCTAGATTGGACTAAAGCAGTA +
Preference number: 5 (lower is better)
Translates to: SVLCTYSRGYHDDKL*RGLTLRTLDWTKAV
Trigger: TACTGCTTTAGTCCAATCTAGCGTTCGCAGCGTCAGGCCCCTCCAGAGCTTGTCGTCGTGGTAACCCCGACTGTAGGTACACAGGACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405068.3
CDS CCA 90 bp AAACCCCACAGCTGGAGTTTTCCTCTAGTGTCTCTGGCCCAAGGATaGATGTGGTCCACTGTGAGCCACCTGAGATCAGATCCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: KPHSWSFPLVSLAQG*MWSTVSHLRSDPSC
Trigger: GCAGGAGGGATCTGATCTCAGGTGGCTCACAGTGGACCACATCCATCCTTGGGCCAGAGACACTAGAGGAAAACTCCAGCTGTGGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405068.3
CDS-3UTR CAA 90 bp GGCCTGAGACTGCTGACCGCATCTTCTTCCTCGTGTATGTGGTTGGGGTGCTGTAGCAGTTTCACTTTGTaGAGTTCCGGGCTGTCTGGG +
Preference number: 5 (lower is better)
Translates to: GLRLLTASSSSCMWLGCCSSFTL*SSGLSG
Trigger: CCCAGACAGCCCGGAACTCAACAAAGTGAAACTGCT...ACAGCACCCCAACCACATACACGAGGAAGAAGATGCGGTCAGCAGTCTCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCATCGCTCTGCGCCAGCTaGACGAAGGCACTGACGCAG +
Preference number: 5 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQASLCAS*TKALTQ
Trigger: CTGCGTCAGTGCCTTCGTCAAGCTGGCGCAGAGCGA...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp AGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACTCGCTCTGCGCCAGCTaGACGAAGGCACTGACGCAG +
Preference number: 5 (lower is better)
Translates to: RGKLTLVYLSNDTPVWWNSLCAS*TKALTQ
Trigger: CTGCGTCAGTGCCTTCGTCAAGCTGGCGCAGAGCGA...GTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp CATGTTGAGGGGACCTTGAAGAACAGCTCCTTTCCCTGTATCTCTCCCCACAGATCAGGCTTGGTCTGCTaGAGGTGTCGCAGGATGGGG +
Preference number: 5 (lower is better)
Translates to: HVEGTLKNSSFPCISPHRSGLVC*RCRRMG
Trigger: CCCCATCCTGCGACACCTCAAGCAGACCAAGCCTGA...TCTGTGGGGAGAGATACAGGGAAAGGAGCTGTTCTTCAAGGTCCCCTCAACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp TTTCCCTGTATCTCTCCCCACAGAGCCCTCCAGAGGAGTAAAGGGGTCACAGAGTGGTCAAACTCAGGCTaGGTCTGCTTGAGGTGTCGC +
Preference number: 5 (lower is better)
Translates to: FPCISPHRALQRSKGVTEWSNSG*VCLRCR
Trigger: GCGACACCTCAAGCAGACCAAGCCTGAGTTTGACCA...CTCTGTGACCCCTTTACTCCTCTGGAGGGCTCTGTGGGGAGAGATACAGGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp CAGCCCAGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGAAGTCCTCCAGCGCTTaGGCACCGATGGTCTCCATG +
Preference number: 5 (lower is better)
Translates to: QPRGKLTLVYLSNDTPVWKSSSA*APMVSM
Trigger: CATGGAGACCATCGGTGCCAAAGCGCTGGAGGACTT...CCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCTGGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp TGTGCACCCAATTCGTCTTTGCAGGAATCTGGATGTGGGCAGCGTGCAAGTCTGAAGTCCTCCAGCGCTTaGGCACCGATGGTCTCCATG +
Preference number: 5 (lower is better)
Translates to: CAPNSSLQESGCGQRASLKSSSA*APMVSM
Trigger: CATGGAGACCATCGGTGCCAAAGCGCTGGAGGACTT...CAGACTTGCACGCTGCCCACATCCAGATTCCTGCAAAGACGAATTGGGTGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGTCCTTGTCCCGGAGCTaGACTCCCGGCTGGAACACA +
Preference number: 5 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQSLSRS*TPGWNT
Trigger: TGTGTTCCAGCCGGGAGTCAAGCTCCGGGACAAGGA...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp TGTGCACCCAATTCGTCTTTGCAGGAATCTGGATGTGGGCAGCGTGCAAGTCTGATAATCTGCCGCTCCTaGTCCCGGAGCTTGACTCCC +
Preference number: 5 (lower is better)
Translates to: CAPNSSLQESGCGQRASLIICRS*SRSLTP
Trigger: GGGAGTCAAGCTCCGGGACAAGGAGCGGCAGATTAT...CAGACTTGCACGCTGCCCACATCCAGATTCCTGCAAAGACGAATTGGGTGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp CAGCCCAGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGATAATCTGCCGCTCCTaGTCCCGGAGCTTGACTCCC +
Preference number: 5 (lower is better)
Translates to: QPRGKLTLVYLSNDTPVWIICRS*SRSLTP
Trigger: GGGAGTCAAGCTCCGGGACAAGGAGCGGCAGATTAT...CCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCTGGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp GCAAGTGTGCCTCAAGGGTCAGTCTTCAATCTCGTCCTAAATAGGTGGGGCCCTTCTGCCCTGCTGCTCTaGGTACACATGGAGCAGCAG +
Preference number: 5 (lower is better)
Translates to: ASVPQGSVFNLVLNRWGPSALLL*VHMEQQ
Trigger: CTGCTGCTCCATGTGTACCAAGAGCAGCAGGGCAGA...AGGGCCCCACCTATTTAGGACGAGATTGAAGACTGACCCTTGAGGCACACTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp TTTTCCCCATTGTCCCTGTCTCCCAGCCCACAGGCAGGCAGCCTAATTGCTCCTGCACCCAATTCGTCTTaGCAGGAATCTGGATGTGGG +
Preference number: 5 (lower is better)
Translates to: FSPLSLSPSPQAGSLIAPAPNSS*QESGCG
Trigger: CCCACATCCAGATTCCTGCAAAGACGAATTGGGTGC...AGGAGCAATTAGGCTGCCTGCCTGTGGGCTGGGAGACAGGGACAATGGGGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp TTTTCCCCATTGTCCCTGTCTCCCAGCCCACAGGCAGGCAGCCTAATTGCTCCTCTGATAACCCATGCCTaGCACAGCCTAAGAGGGTGT +
Preference number: 5 (lower is better)
Translates to: FSPLSLSPSPQAGSLIAPLITHA*HSLRGC
Trigger: ACACCCTCTTAGGCTGTGCAAGGCATGGGTTATCAG...AGGAGCAATTAGGCTGCCTGCCTGTGGGCTGGGAGACAGGGACAATGGGGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR CAA 90 bp GCAAGTGTGCCTCAAGGGTCAGTCTTCAATCTCGTCCTAAATAGGTGGGGCCCTTCCATCATCGCTCTCTaGGTGCCTGCAGAGGCACTG +
Preference number: 5 (lower is better)
Translates to: ASVPQGSVFNLVLNRWGPSIIAL*VPAEAL
Trigger: CAGTGCCTCTGCAGGCACCAAGAGAGCGATGATGGA...AGGGCCCCACCTATTTAGGACGAGATTGAAGACTGACCCTTGAGGCACACTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR CAA 90 bp GGGACACAGCTCCCGGAGGCGTGGAGACAGGTCTCTGTCCCAGAGGACTTCAAGGTTGCAAAACAAGGTTaGGGAAGCCCTTCTATGGAT +
Preference number: 5 (lower is better)
Translates to: GTQLPEAWRQVSVPEDFKVAKQG*GSPSMD
Trigger: ATCCATAGAAGGGCTTCCCAAACCTTGTTTTGCAAC...CTTGAAGTCCTCTGGGACAGAGACCTGTCTCCACGCCTCCGGGAGCTGTGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR CAA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGTCCTCCTGCTTCAGCTaGTCCTCAATCTCCCGCCGT +
Preference number: 5 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQSSCFS*SSISRR
Trigger: ACGGCGGGAGATTGAGGACAAGCTGAAGCAGGAGGA...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000405575.8
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGATCGTCCCTGGCCGCTaGACTGGCTTCTTGGTAGGT +
Preference number: 5 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQIVPGR*TGFLVG
Trigger: ACCTACCAAGAAGCCAGTCAAGCGGCCAGGGACGAT...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335146.11
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCATCAGGCTTGGTCTGCTaGAGGTGTCGCAGGATGGGG +
Preference number: 5 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQASGLVC*RCRRMG
Trigger: CCCCATCCTGCGACACCTCAAGCAGACCAAGCCTGA...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp TTTTCCCCATTGTCCCTGTCTCCCAGCCCACAGGCAGGCAGCCTAATTGCTCCTTTGTCCGGGTCATTCTaGATGTTGTCTGCGAAGTCC +
Preference number: 5 (lower is better)
Translates to: FSPLSLSPSPQAGSLIAPLSGSF*MLSAKS
Trigger: GGACTTCGCAGACAACATCAAGAATGACCCGGACAA...AGGAGCAATTAGGCTGCCTGCCTGTGGGCTGGGAGACAGGGACAATGGGGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGCCGTCCTTCGGCATGTaGTACTCCTTGTCCGGGTCA +
Preference number: 5 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQPSFGM*YSLSGS
Trigger: TGACCCGGACAAGGAGTACAACATGCCGAAGGACGG...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp CAGCCCAGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGAGGAAGAGGATGGCATaGCTGGTGAGCTCGTGTACG +
Preference number: 5 (lower is better)
Translates to: QPRGKLTLVYLSNDTPVWRKRMA*LVSSCT
Trigger: CGTACACGAGCTCACCAGCAATGCCATCCTCTTCCT...CCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCTGGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp AGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACTCCTTGTCCCGGAGCTaGACTCCCGGCTGGAACACA +
Preference number: 5 (lower is better)
Translates to: RGKLTLVYLSNDTPVWWNSLSRS*TPGWNT
Trigger: TGTGTTCCAGCCGGGAGTCAAGCTCCGGGACAAGGA...GTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCATCCTTGTCCCGGAGCTaGACTCCCGGCTGGAACACA +
Preference number: 5 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQASLSRS*TPGWNT
Trigger: TGTGTTCCAGCCGGGAGTCAAGCTCCGGGACAAGGA...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp TTTTCCCCATTGTCCCTGTCTCCCAGCCCACAGGCAGGCAGCCTAATTGCTCCTCCCTTAAAACGCTCCTaGATAATCTGCCGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: FSPLSLSPSPQAGSLIAPPLKRS*IICRSL
Trigger: CAAGGAGCGGCAGATTATCAAGGAGCGTTTTAAGGG...AGGAGCAATTAGGCTGCCTGCCTGTGGGCTGGGAGACAGGGACAATGGGGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGTACTTCTCCGGGTTCTaGGTGAAGGGCACGCTGCCA +
Preference number: 5 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQYFSGF*VKGTLP
Trigger: TGGCAGCGTGCCCTTCACCAAGAACCCGGAGAAGTA...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGTCTTCGAGGCCATCATaGAAGCCCTTGACTCCCGGC +
Preference number: 5 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQSSRPS*KPLTPG
Trigger: GCCGGGAGTCAAGGGCTTCAATGATGGCCTCGAAGA...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405575.8
CDS GCA 90 bp AAGGGTGTAAGTAAGCTCTACCCAAAGCTTGTTGTCATAAGCAGGTaGCACAGGCCACAACTAGGGCATGTGCCCACAGCAGCAGCTGGA +
Preference number: 5 (lower is better)
Translates to: KGVSKLYPKLVVISR*HRPQLGHVPTAAAG
Trigger: TCCAGCTGCTGCTGTGGGCACATGCCCTAGTTGTGGCCTGTGGCACCTGCTTATGACAACAAGCTTTGGGTAGAGCTTACTTACACCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405068.3
CDS CCA 90 bp CCAGACAGAAAGAGAAGCATGAGGGCAGAGGGTGGCCTGCCTCAGTaGCCTGGCTTGTTTCGTTTGCTAAATCTCTGGATCTACTTGGTG +
Preference number: 5 (lower is better)
Translates to: PDRKRSMRAEGGLPQ*PGLFRLLNLWIYLV
Trigger: CACCAAGTAGATCCAGAGATTTAGCAAACGAAACAAGCCAGGCCACTGAGGCAGGCCACCCTCTGCCCTCATGCTTCTCTTTCTGTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465252.5
CDS-3UTR CAA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAATCGTCCCTGGCCGCTaGACTGGCTTCTTGGTAGGT +
Preference number: 5 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQAIVPGR*TGFLVG
Trigger: ACCTACCAAGAAGCCAGTCAAGCGGCCAGGGACGAT...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGTGGTCAAACTCAGGCTaGGTCTGCTTGAGGTGTCGC +
Preference number: 5 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQWSNSG*VCLRCR
Trigger: GCGACACCTCAAGCAGACCAAGCCTGAGTTTGACCA...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp CATGTTGAGGGGACCTTGAAGAACAGCTCCTTTCCCTGTATCTCTCCCCACAGATGGTCAAACTCAGGCTaGGTCTGCTTGAGGTGTCGC +
Preference number: 5 (lower is better)
Translates to: HVEGTLKNSSFPCISPHRWSNSG*VCLRCR
Trigger: GCGACACCTCAAGCAGACCAAGCCTGAGTTTGACCA...TCTGTGGGGAGAGATACAGGGAAAGGAGCTGTTCTTCAAGGTCCCCTCAACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAATGAGGCCAGGCAGCTaGTTCTTTGTGCTGGCAGCC +
Preference number: 5 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQAMRPGS*FFVLAA
Trigger: GGCTGCCAGCACAAAGAACAAGCTGCCTGGCCTCAT...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAAAGTCCTCCAGCGCTTaGGCACCGATGGTCTCCATG +
Preference number: 5 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQAKSSSA*APMVSM
Trigger: CATGGAGACCATCGGTGCCAAAGCGCTGGAGGACTT...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCACCGTCCTTCGGCATGTaGTACTCCTTGTCCGGGTCA +
Preference number: 5 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQAPSFGM*YSLSGS
Trigger: TGACCCGGACAAGGAGTACAACATGCCGAAGGACGG...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp AGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCCGTCCTTCGGCATGTaGTACTCCTTGTCCGGGTCA +
Preference number: 5 (lower is better)
Translates to: RGKLTLVYLSNDTPVWWNPSFGM*YSLSGS
Trigger: TGACCCGGACAAGGAGTACAACATGCCGAAGGACGG...GTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGAGGAAGAGGATGGCATaGCTGGTGAGCTCGTGTACG +
Preference number: 5 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQRKRMA*LVSSCT
Trigger: CGTACACGAGCTCACCAGCAATGCCATCCTCTTCCT...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAATAATCTGCCGCTCCTaGTCCCGGAGCTTGACTCCC +
Preference number: 5 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQAIICRS*SRSLTP
Trigger: GGGAGTCAAGCTCCGGGACAAGGAGCGGCAGATTAT...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp TTTCCCTGTATCTCTCCCCACAGAGCCCTCCAGAGGAGTAAAGGGGTCACAGAGTCTTCGAGGCCATCATaGAAGCCCTTAAAACGCTCC +
Preference number: 5 (lower is better)
Translates to: FPCISPHRALQRSKGVTESSRPS*KPLKRS
Trigger: GGAGCGTTTTAAGGGCTTCAATGATGGCCTCGAAGA...CTCTGTGACCCCTTTACTCCTCTGGAGGGCTCTGTGGGGAGAGATACAGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCATACTTCTCCGGGTTCTaGGTGAAGGGCACGCTGCCA +
Preference number: 5 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQAYFSGF*VKGTLP
Trigger: TGGCAGCGTGCCCTTCACCAAGAACCCGGAGAAGTA...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGTGCTCCACCCCGTACTaGATGTACTTCTCCGGGTTC +
Preference number: 5 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQCSTPY*MYFSGF
Trigger: GAACCCGGAGAAGTACATCAAGTACGGGGTGGAGCA...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp CAGCCCAGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGCTTAACTTTTCCCCATaGTCCCTGTCTCCCAGCCCA +
Preference number: 5 (lower is better)
Translates to: QPRGKLTLVYLSNDTPVWLNFSP*SLSPSP
Trigger: TGGGCTGGGAGACAGGGACAATGGGGAAAAGTTAAG...CCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCTGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp TGTGCACCCAATTCGTCTTTGCAGGAATCTGGATGTGGGCAGCGTGCAAGTCTGGCACCCAATTCGTCTTaGCAGGAATCTGGATGTGGG +
Preference number: 5 (lower is better)
Translates to: CAPNSSLQESGCGQRASLAPNSS*QESGCG
Trigger: CCCACATCCAGATTCCTGCAAAGACGAATTGGGTGC...CAGACTTGCACGCTGCCCACATCCAGATTCCTGCAAAGACGAATTGGGTGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp TGTGCACCCAATTCGTCTTTGCAGGAATCTGGATGTGGGCAGCGTGCAAGTCTGCATGTTGAGGGGACCTaGAAGAACAGCTCCTTTCCC +
Preference number: 5 (lower is better)
Translates to: CAPNSSLQESGCGQRASLHVEGT*KNSSFP
Trigger: GGGAAAGGAGCTGTTCTTCAAGGTCCCCTCAACATG...CAGACTTGCACGCTGCCCACATCCAGATTCCTGCAAAGACGAATTGGGTGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp CAGCCCAGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGCTGATAACCCATGCCTaGCACAGCCTAAGAGGGTGT +
Preference number: 5 (lower is better)
Translates to: QPRGKLTLVYLSNDTPVWLITHA*HSLRGC
Trigger: ACACCCTCTTAGGCTGTGCAAGGCATGGGTTATCAG...CCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCTGGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR CAA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGCCATCATTGAAGCCCTaGACTCCCGGCTGGAACACA +
Preference number: 5 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQPSLKP*TPGWNT
Trigger: TGTGTTCCAGCCGGGAGTCAAGGGCTTCAATGATGG...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405575.8
CDS-3UTR CAA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGAGATTCTCCGTCTGCTaGTGCACAGGGATGATGGAG +
Preference number: 5 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQRFSVC*CTGMME
Trigger: CTCCATCATCCCTGTGCACAAGCAGACGGAGAATCT...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGAGCAGTTTCACTTTGTaGAGTTCCGGGCTGTCTGGG +
Preference number: 5 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQSSFTL*SSGLSG
Trigger: CCCAGACAGCCCGGAACTCAACAAAGTGAAACTGCT...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCATGGTCAAACTCAGGCTaGGTCTGCTTGAGGTGTCGC +
Preference number: 5 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQAWSNSG*VCLRCR
Trigger: GCGACACCTCAAGCAGACCAAGCCTGAGTTTGACCA...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp TGTGCACCCAATTCGTCTTTGCAGGAATCTGGATGTGGGCAGCGTGCAAGTCTGTTGTCCGGGTCATTCTaGATGTTGTCTGCGAAGTCC +
Preference number: 5 (lower is better)
Translates to: CAPNSSLQESGCGQRASLLSGSF*MLSAKS
Trigger: GGACTTCGCAGACAACATCAAGAATGACCCGGACAA...CAGACTTGCACGCTGCCCACATCCAGATTCCTGCAAAGACGAATTGGGTGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAAGGAAGAGGATGGCATaGCTGGTGAGCTCGTGTACG +
Preference number: 5 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQARKRMA*LVSSCT
Trigger: CGTACACGAGCTCACCAGCAATGCCATCCTCTTCCT...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp GCAAGTGTGCCTCAAGGGTCAGTCTTCAATCTCGTCCTAAATAGGTGGGGCCCTCCCTTAAAACGCTCCTaGATAATCTGCCGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: ASVPQGSVFNLVLNRWGPPLKRS*IICRSL
Trigger: CAAGGAGCGGCAGATTATCAAGGAGCGTTTTAAGGG...AGGGCCCCACCTATTTAGGACGAGATTGAAGACTGACCCTTGAGGCACACTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp CAGCCCAGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTCTTCGAGGCCATCATaGAAGCCCTTAAAACGCTCC +
Preference number: 5 (lower is better)
Translates to: QPRGKLTLVYLSNDTPVWSSRPS*KPLKRS
Trigger: GGAGCGTTTTAAGGGCTTCAATGATGGCCTCGAAGA...CCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCTGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp TGTGCACCCAATTCGTCTTTGCAGGAATCTGGATGTGGGCAGCGTGCAAGTCTGTCTTCGAGGCCATCATaGAAGCCCTTAAAACGCTCC +
Preference number: 5 (lower is better)
Translates to: CAPNSSLQESGCGQRASLSSRPS*KPLKRS
Trigger: GGAGCGTTTTAAGGGCTTCAATGATGGCCTCGAAGA...CAGACTTGCACGCTGCCCACATCCAGATTCCTGCAAAGACGAATTGGGTGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCATGCTCCACCCCGTACTaGATGTACTTCTCCGGGTTC +
Preference number: 5 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQACSTPY*MYFSGF
Trigger: GAACCCGGAGAAGTACATCAAGTACGGGGTGGAGCA...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp CATGTTGAGGGGACCTTGAAGAACAGCTCCTTTCCCTGTATCTCTCCCCACAGACATGTTGAGGGGACCTaGAAGAACAGCTCCTTTCCC +
Preference number: 5 (lower is better)
Translates to: HVEGTLKNSSFPCISPHRHVEGT*KNSSFP
Trigger: GGGAAAGGAGCTGTTCTTCAAGGTCCCCTCAACATG...TCTGTGGGGAGAGATACAGGGAAAGGAGCTGTTCTTCAAGGTCCCCTCAACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp GCTATATCCTTCTGTGTATTCTACTGCATACATCCTCAAGCTGGCTCCATGTCCTCCTCCTGCTTCAGCTaGTCCTCAATCTCCCGCCGT +
Preference number: 5 (lower is better)
Translates to: AISFCVFYCIHPQAGSMSSSCFS*SSISRR
Trigger: ACGGCGGGAGATTGAGGACAAGCTGAAGCAGGAGGA...GGACATGGAGCCAGCTTGAGGATGTATGCAGTAGAATACACAGAAGGATATAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406660.4
CDS-3UTR CAA 90 bp AGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACAGATTCTCCGTCTGCTaGTGCACAGGGATGATGGAG +
Preference number: 5 (lower is better)
Translates to: RGKLTLVYLSNDTPVWWNRFSVC*CTGMME
Trigger: CTCCATCATCCCTGTGCACAAGCAGACGGAGAATCT...GTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAAGATTCTCCGTCTGCTaGTGCACAGGGATGATGGAG +
Preference number: 5 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQARFSVC*CTGMME
Trigger: CTCCATCATCCCTGTGCACAAGCAGACGGAGAATCT...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAAGCAGTTTCACTTTGTaGAGTTCCGGGCTGTCTGGG +
Preference number: 5 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQASSFTL*SSGLSG
Trigger: CCCAGACAGCCCGGAACTCAACAAAGTGAAACTGCT...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp CAGCCCAGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGAAGAGCAGTTTCACTTaGTTGAGTTCCGGGCTGTCT +
Preference number: 5 (lower is better)
Translates to: QPRGKLTLVYLSNDTPVWKSSFT*LSSGLS
Trigger: AGACAGCCCGGAACTCAACAAAGTGAAACTGCTCTT...CCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCTGGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp TGTGCACCCAATTCGTCTTTGCAGGAATCTGGATGTGGGCAGCGTGCAAGTCTGGACGTTCATGAAATCTaGGTTGCGGCCATATTCCAC +
Preference number: 5 (lower is better)
Translates to: CAPNSSLQESGCGQRASLDVHEI*VAAIFH
Trigger: GTGGAATATGGCCGCAACCAAGATTTCATGAACGTC...CAGACTTGCACGCTGCCCACATCCAGATTCCTGCAAAGACGAATTGGGTGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp CAGCCCAGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGGACGTTCATGAAATCTaGGTTGCGGCCATATTCCAC +
Preference number: 5 (lower is better)
Translates to: QPRGKLTLVYLSNDTPVWDVHEI*VAAIFH
Trigger: GTGGAATATGGCCGCAACCAAGATTTCATGAACGTC...CCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCTGGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGTTGTCCGGGTCATTCTaGATGTTGTCTGCGAAGTCC +
Preference number: 5 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQLSGSF*MLSAKS
Trigger: GGACTTCGCAGACAACATCAAGAATGACCCGGACAA...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGGCATGTTGTACTCCTaGTCCGGGTCATTCTTGATG +
Preference number: 5 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQGMLYS*SGSFLM
Trigger: CATCAAGAATGACCCGGACAAGGAGTACAACATGCC...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGCCCTTAAAACGCTCCTaGATAATCTGCCGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQPLKRS*IICRSL
Trigger: CAAGGAGCGGCAGATTATCAAGGAGCGTTTTAAGGG...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp AGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACGCACCCAATTCGTCTTaGCAGGAATCTGGATGTGGG +
Preference number: 5 (lower is better)
Translates to: RGKLTLVYLSNDTPVWWNAPNSS*QESGCG
Trigger: CCCACATCCAGATTCCTGCAAAGACGAATTGGGTGC...GTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp AGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACGGCTACAAGGTGACATaGCTGCTGAGTTACCTCGTC +
Preference number: 5 (lower is better)
Translates to: RGKLTLVYLSNDTPVWWNGYKVT*LLSYLV
Trigger: GACGAGGTAACTCAGCAGCAATGTCACCTTGTAGCC...GTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR CAA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAGGCTACAAGGTGACATaGCTGCTGAGTTACCTCGTC +
Preference number: 5 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQAGYKVT*LLSYLV
Trigger: GACGAGGTAACTCAGCAGCAATGTCACCTTGTAGCC...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR CAA 90 bp CAGCCCAGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTTCTATGGATCGGTTTaGTGTCCAAGTCTGTCCCTG +
Preference number: 5 (lower is better)
Translates to: QPRGKLTLVYLSNDTPVWFYGSV*CPSLSL
Trigger: CAGGGACAGACTTGGACACAAAACCGATCCATAGAA...CCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCTGGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS CCA 90 bp TCTTCCGAGAGGATGCTCTGGGGTTTCTTTCCTTTCTGGATCAACTaGGAAAGTGAAATTCTCCCCATCCAGCTCTCAGCTACACGTCAC +
Preference number: 5 (lower is better)
Translates to: SSERMLWGFFPFWIN*ESEILPIQLSATRH
Trigger: GTGACGTGTAGCTGAGAGCTGGATGGGGAGAATTTCACTTTCCCAGTTGATCCAGAAAGGAAAGAAACCCCAGAGCATCCTCTCGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405068.3
CDS-3UTR CAA 90 bp GGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGAAGAGCAGTTTCACTTaGTTGAGTTCCGGGCTGTCT +
Preference number: 5 (lower is better)
Translates to: GKLTLVYLSNDTPVWWNQKSSFT*LSSGLS
Trigger: AGACAGCCCGGAACTCAACAAAGTGAAACTGCTCTT...CTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp CATGTTGAGGGGACCTTGAAGAACAGCTCCTTTCCCTGTATCTCTCCCCACAGAGACGTTCATGAAATCTaGGTTGCGGCCATATTCCAC +
Preference number: 5 (lower is better)
Translates to: HVEGTLKNSSFPCISPHRDVHEI*VAAIFH
Trigger: GTGGAATATGGCCGCAACCAAGATTTCATGAACGTC...TCTGTGGGGAGAGATACAGGGAAAGGAGCTGTTCTTCAAGGTCCCCTCAACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCATTGTCCGGGTCATTCTaGATGTTGTCTGCGAAGTCC +
Preference number: 5 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQALSGSF*MLSAKS
Trigger: GGACTTCGCAGACAACATCAAGAATGACCCGGACAA...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp AGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACTTGTCCGGGTCATTCTaGATGTTGTCTGCGAAGTCC +
Preference number: 5 (lower is better)
Translates to: RGKLTLVYLSNDTPVWWNLSGSF*MLSAKS
Trigger: GGACTTCGCAGACAACATCAAGAATGACCCGGACAA...GTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAGGCATGTTGTACTCCTaGTCCGGGTCATTCTTGATG +
Preference number: 5 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQAGMLYS*SGSFLM
Trigger: CATCAAGAATGACCCGGACAAGGAGTACAACATGCC...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp AGAGGCAAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCCCTTAAAACGCTCCTaGATAATCTGCCGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: RGKLTLVYLSNDTPVWWNPLKRS*IICRSL
Trigger: CAAGGAGCGGCAGATTATCAAGGAGCGTTTTAAGGG...GTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTTGCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCACCCTTAAAACGCTCCTaGATAATCTGCCGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQAPLKRS*IICRSL
Trigger: CAAGGAGCGGCAGATTATCAAGGAGCGTTTTAAGGG...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCATCTTCGAGGCCATCATaGAAGCCCTTAAAACGCTCC +
Preference number: 5 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQASSRPS*KPLKRS
Trigger: GGAGCGTTTTAAGGGCTTCAATGATGGCCTCGAAGA...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp GGCCTGAGACTGCTGACCGCATCTTCTTCCTCGTGTATGTGGTTGGGGTGCTGTAGACAATTTGGGATGTaGCAAAACAAGGTTTGGGAA +
Preference number: 5 (lower is better)
Translates to: GLRLLTASSSSCMWLGCCRQFGM*QNKVWE
Trigger: TTCCCAAACCTTGTTTTGCAACATCCCAAATTGTCT...ACAGCACCCCAACCACATACACGAGGAAGAAGATGCGGTCAGCAGTCTCAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR CAA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAAAGAGCAGTTTCACTTaGTTGAGTTCCGGGCTGTCT +
Preference number: 5 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQAKSSFT*LSSGLS
Trigger: AGACAGCCCGGAACTCAACAAAGTGAAACTGCTCTT...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAGACGTTCATGAAATCTaGGTTGCGGCCATATTCCAC +
Preference number: 5 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQADVHEI*VAAIFH
Trigger: GTGGAATATGGCCGCAACCAAGATTTCATGAACGTC...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
CDS-3UTR CAA 90 bp TTTCCCTGTATCTCTCCCCACAGAGCCCTCCAGAGGAGTAAAGGGGTCACAGAGAGACAATTTGGGATGTaGCAAAACAAGGTTTGGGAA +
Preference number: 5 (lower is better)
Translates to: FPCISPHRALQRSKGVTERQFGM*QNKVWE
Trigger: TTCCCAAACCTTGTTTTGCAACATCCCAAATTGTCT...CTCTGTGACCCCTTTACTCCTCTGGAGGGCTCTGTGGGGAGAGATACAGGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332065.9
ENST00000589210.6
CDS-3UTR CAA 90 bp CTTGAAGCAGAGATCCTAATGCCTATAGGATGTACTGTGCTATATCCTTCTGTGCCCCTTACCACTTTGTaGAGTTCCGGGCTGTCTGGG +
Preference number: 5 (lower is better)
Translates to: LEAEILMPIGCTVLYPSVPLTTL*SSGLSG
Trigger: CCCAGACAGCCCGGAACTCAACAAAGTGGTAAGGGG...CACAGAAGGATATAGCACAGTACATCCTATAGGCATTAGGATCTCTGCTTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406660.4
CDS-3UTR CAA 90 bp GCAAGTGTGCCTCAAGGGTCAGTCTTCAATCTCGTCCTAAATAGGTGGGGCCCTGGGTCTAAAGGAATATaGTATGTGTCCCCAAGAACT +
Preference number: 5 (lower is better)
Translates to: ASVPQGSVFNLVLNRWGPGSKGI*YVSPRT
Trigger: AGTTCTTGGGGACACATACAATATTCCTTTAGACCC...AGGGCCCCACCTATTTAGGACGAGATTGAAGACTGACCCTTGAGGCACACTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607838.5
CDS TCA 90 bp AGTGAGGCCATTCGTGAAGATCAAAGAAACGAAATCACCAGGCAGTaGTACCAGGGCTGGATAGTCACCTTCTGGCACCTTTTAGACATC +
Preference number: 5 (lower is better)
Translates to: SEAIREDQRNEITRQ*YQGWIVTFWHLLDI
Trigger: GATGTCTAAAAGGTGCCAGAAGGTGACTATCCAGCCCTGGTATCACTGCCTGGTGATTTCGTTTCTTTGATCTTCACGAATGGCCTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589507.6
CDS-3UTR CAA 90 bp CTTGAAGCAGAGATCCTAATGCCTATAGGATGTACTGTGCTATATCCTTCTGTGGGACCCCTTACCACTTaGTTGAGTTCCGGGCTGTCT +
Preference number: 5 (lower is better)
Translates to: LEAEILMPIGCTVLYPSVGPLTT*LSSGLS
Trigger: AGACAGCCCGGAACTCAACAAAGTGGTAAGGGGTCC...CACAGAAGGATATAGCACAGTACATCCTATAGGCATTAGGATCTCTGCTTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406660.4
CDS-3UTR CAA 90 bp CTTGAAGCAGAGATCCTAATGCCTATAGGATGTACTGTGCTATATCCTTCTGTGAGATTCTCCGTCTGCTaGTGCACAGGGATGATGGAG +
Preference number: 5 (lower is better)
Translates to: LEAEILMPIGCTVLYPSVRFSVC*CTGMME
Trigger: CTCCATCATCCCTGTGCACAAGCAGACGGAGAATCT...CACAGAAGGATATAGCACAGTACATCCTATAGGCATTAGGATCTCTGCTTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406660.4
CDS-3UTR CAA 90 bp AAGCTAACACTGGTTTATCTGTCCAATGACACGCCAGTCTGGTGGAACCAGGCAGGGTCTAAAGGAATATaGTATGTGTCCCCAAGAACT +
Preference number: 5 (lower is better)
Translates to: KLTLVYLSNDTPVWWNQAGSKGI*YVSPRT
Trigger: AGTTCTTGGGGACACATACAATATTCCTTTAGACCC...TGCCTGGTTCCACCAGACTGGCGTGTCATTGGACAGATAAACCAGTGTTAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467929.6
ENST00000607838.5
CDS GCA 72 bp GCCCGGCCGACGGCCTCCCACAGCGACCCCTCTGAGTaGCCAGGGCCAGCCCAGGGCTGGGATCCGCCCAGT +
Preference number: 6 (lower is better)
Translates to: ARPTASHSDPSE*PGPAQGWDPPS
Trigger: ACTGGGCGGATCCCAGCCCTGGGCTGGCCCTGGGCACTCAGAGGGGTCGCTGTGGGAGGCCGTCGGCCGGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460476.5
ENST00000467586.5
CDS CCA 72 bp GGCCTGGGTGGGAAGAAAACGGTGCAGAAGGGCAAGTaGCAGGCCCGGCCGACGGCCTCCCACAGCGACCCC +
Preference number: 6 (lower is better)
Translates to: GLGGKKTVQKGK*QARPTASHSDP
Trigger: GGGGTCGCTGTGGGAGGCCGTCGGCCGGGCCTGCCACTTGCCCTTCTGCACCGTTTTCTTCCCACCCAGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460476.5
ENST00000467586.5
CDS CAA 90 bp GACAGGCCAGTGGCGCAGCTGGCTGCCCCGGGACAACGCACCCTCTaGGAGGCCTGCTCTGAGAGTCCCCCAGGGCCAGGTCACTGTGGT +
Preference number: 6 (lower is better)
Translates to: DRPVAQLAAPGQRTL*EACSESPPGPGHCG
Trigger: ACCACAGTGACCTGGCCCTGGGGGACTCTCAGAGCAGGCCTCCAAGAGGGTGCGTTGTCCCGGGGCAGCCAGCTGCGCCACTGGCCTGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467586.5
CDS CCA 72 bp GTCCTCAATCTCCCGCCGTCGAGCGGATGCCTCCTGTaGGGGAATCATCGCTCTGAACCCCGCGGCTCCCAC +
Preference number: 6 (lower is better)
Translates to: VLNLPPSSGCLL*GNHRSEPRGSH
Trigger: GTGGGAGCCGCGGGGTTCAGAGCGATGATTCCCCCACAGGAGGCATCCGCTCGACGGCGGGAGATTGAGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335146.11
ENST00000405068.3
ENST00000405575.8
ENST00000406660.4
ENST00000589210.6
CDS CCA 72 bp CAGGGTGGGCAGGTGGCTGTGCCACCTCAAGGAGGCTaGCACTGGGGTCATCCATGTGGGCAAATGCGGGGC +
Preference number: 6 (lower is better)
Translates to: QGGQVAVPPQGG*HWGHPCGQMRG
Trigger: GCCCCGCATTTGCCCACATGGATGACCCCAGTGCCAGCCTCCTTGAGGTGGCACAGCCACCTGCCCACCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467586.5
CDS GCA 72 bp CGGGCGAGACGACCTTACTGTGCCGCGTCATCAGGCTaGGAAATTCGGACTCCAGGGCCTCCTTCCCGCGCT +
Preference number: 6 (lower is better)
Translates to: RARRPYCAASSG*EIRTPGPPSRA
Trigger: AGCGCGGGAAGGAGGCCCTGGAGTCCGAATTTCGCAGCCTGATGACGCGGCACAGTAAGGTCGTCTCGCCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405068.3
ENST00000405575.8
ENST00000411744.6
ENST00000420116.1
ENST00000442951.5
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
ENST00000634349.1
CDS GCA 72 bp GTCATCTCTCCCTGGGGGATGGCACAACTCTTGAGCTaGTGGTCTGGGGCCAGCCACACTCCTGGCTGGGGG +
Preference number: 6 (lower is better)
Translates to: VISPWGMAQLLS*WSGASHTPGWG
Trigger: CCCCCAGCCAGGAGTGTGGCTGGCCCCAGACCAGCAGCTCAAGAGTTGTGCCATCCCCCAGGGAGAGATGAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467586.5
CDS CCA 72 bp GAGCAGACACAGACGCAGGTGCACGCCGGCAGGATGTaGGTCGCCGATGTGGATCTAGCAGCCGCCAAACCC +
Preference number: 6 (lower is better)
Translates to: EQTQTQVHAGRM*VADVDLAAAKP
Trigger: GGGTTTGGCGGCTGCTAGATCCACATCGGCGACCCACATCCTGCCGGCGTGCACCTGCGTCTGTGTCTGCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405068.3
CDS CCA 72 bp GCCACCCAGGACTGCTCACAAAGGTGCGAGCGGCTCTaGGCCAGGCTGAGTCCCTTCCACCAGTACTCTGCC +
Preference number: 6 (lower is better)
Translates to: ATQDCSQRCERL*ARLSPFHQYSA
Trigger: GGCAGAGTACTGGTGGAAGGGACTCAGCCTGGCCCAGAGCCGCTCGCACCTTTGTGAGCAGTCCTGGGTGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467586.5
CDS CAA 90 bp GCTGCGCCCACAGGCTGGGCTGGCAGTCCCCATTTGCAGCAGGTTTaGGCTGGTGGGCAGGATTTCCACACTGGAGGGAGAAGGCCCCAG +
Preference number: 6 (lower is better)
Translates to: AAPTGWAGSPHLQQV*AGGQDFHTGGRRPQ
Trigger: CTGGGGCCTTCTCCCTCCAGTGTGGAAATCCTGCCCACCAGCCAAAACCTGCTGCAAATGGGGACTGCCAGCCCAGCCTGTGGGCGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405068.3
CDS TCA 72 bp CAAACCCGTCAGGCTCCCAATTGCCTCCAGGGATGCTaGGGTCGGTGCTTCACCACCTGGGAGGCCTCCCTG +
Preference number: 6 (lower is better)
Translates to: QTRQAPNCLQGC*GRCFTTWEASL
Trigger: CAGGGAGGCCTCCCAGGTGGTGAAGCACCGACCTCAGCATCCCTGGAGGCAATTGGGAGCCTGACGGGTTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405068.3
CDS GCA 72 bp ACAGCAACACCCACCGGCCCCGGCCTCTCATCATGGTaGCCCTTTCCACAAGTCACTCGCTCGCACTGGAGC +
Preference number: 6 (lower is better)
Translates to: TATPTGPGLSSW*PFPQVTRSHWS
Trigger: GCTCCAGTGCGAGCGAGTGACTTGTGGAAAGGGGCACCATGATGAGAGGCCGGGGCCGGTGGGTGTTGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405068.3
CDS GCA 72 bp AGACAGCCACTCCCCACCACACAGAAGGCACAGAGCTaGTCCATCCACTGTGCAGGCAGCTGCGCCCACAGG +
Preference number: 6 (lower is better)
Translates to: RQPLPTTQKAQS*SIHCAGSCAHR
Trigger: CCTGTGGGCGCAGCTGCCTGCACAGTGGATGGAGCAGCTCTGTGCCTTCTGTGTGGTGGGGAGTGGCTGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405068.3
CDS CCA 72 bp AGGACAGCAACACCCACCGGCCCCGGCCTCTCATCATaGTGCCCCTTTCCACAAGTCACTCGCTCGCACTGG +
Preference number: 6 (lower is better)
Translates to: RTATPTGPGLSS*CPFPQVTRSHW
Trigger: CCAGTGCGAGCGAGTGACTTGTGGAAAGGGGCACCATGATGAGAGGCCGGGGCCGGTGGGTGTTGCTGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405068.3
CDS CCA 72 bp ATCCACTGTGCAGGCAGCTGCGCCCACAGGCTGGGCTaGCAGTCCCCATTTGCAGCAGGTTTTGGCTGGTGG +
Preference number: 6 (lower is better)
Translates to: IHCAGSCAHRLG*QSPFAAGFGWW
Trigger: CCACCAGCCAAAACCTGCTGCAAATGGGGACTGCCAGCCCAGCCTGTGGGCGCAGCTGCCTGCACAGTGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405068.3
CDS CAA 90 bp ACTGTGCAGGCAGCTGCGCCCACAGGCTGGGCTGGCAGTCCCCATTaGCAGCAGGTTTTGGCTGGTGGGCAGGATTTCCACACTGGAGGG +
Preference number: 6 (lower is better)
Translates to: TVQAAAPTGWAGSPH*QQVLAGGQDFHTGG
Trigger: CCCTCCAGTGTGGAAATCCTGCCCACCAGCCAAAACCTGCTGCAAATGGGGACTGCCAGCCCAGCCTGTGGGCGCAGCTGCCTGCACAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405068.3
CDS TCA 72 bp GGGAGTCGAAGGTCTTCTTCTGGTGGTGCTCGGGGATaGTGTCGGCCAGCAGCTGGTACTCGCTCTGCGCCA +
Preference number: 6 (lower is better)
Translates to: GSRRSSSGGARG*CRPAAGTRSAP
Trigger: TGGCGCAGAGCGAGTACCAGCTGCTGGCCGACATCATCCCCGAGCACCACCAGAAGAAGACCTTCGACTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000411744.6
ENST00000467586.5
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
ENST00000634349.1
CDS TCA 72 bp GGAGTTCCCCGTGACCGACTCTGTGTCCTGAGGTGCTaGGAAGGAAGAGTGCGTGGTGGCACAGGGGCCCAT +
Preference number: 6 (lower is better)
Translates to: GVPRDRLCVLRC*EGRVRGGTGAH
Trigger: ATGGGCCCCTGTGCCACCACGCACTCTTCCTTCTCAGCACCTCAGGACACAGAGTCGGTCACGGGGAACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494787.6
CDS GCA 72 bp CTTCAGCTTGTCCTCAATCTCCCGCCGTCGAGCGGATaGCTCCTGTGGGGGAATCATCGCTCTGAACCCCGC +
Preference number: 6 (lower is better)
Translates to: LQLVLNLPPSSG*LLWGNHRSEPR
Trigger: GCGGGGTTCAGAGCGATGATTCCCCCACAGGAGGCATCCGCTCGACGGCGGGAGATTGAGGACAAGCTGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000335146.11
ENST00000405068.3
ENST00000405575.8
ENST00000406660.4
ENST00000589210.6
CDS GCA 72 bp TCGGGGATGATGTCGGCCAGCAGCTGGTACTCGCTCTaGGCCAGCTTGACGAAGGCACTGACGCAGTGGATG +
Preference number: 6 (lower is better)
Translates to: SGMMSASSWYSL*ASLTKALTQWM
Trigger: CATCCACTGCGTCAGTGCCTTCGTCAAGCTGGCGCAGAGCGAGTACCAGCTGCTGGCCGACATCATCCCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000411744.6
ENST00000467586.5
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
ENST00000634349.1
CDS GCA 72 bp CAGCTGCGCCCACAGGCTGGGCTGGCAGTCCCCATTTaGAGCAGGTTTTGGCTGGTGGGCAGGATTTCCACA +
Preference number: 6 (lower is better)
Translates to: QLRPQAGLAVPI*SRFWLVGRIST
Trigger: TGTGGAAATCCTGCCCACCAGCCAAAACCTGCTGCAAATGGGGACTGCCAGCCCAGCCTGTGGGCGCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405068.3
CDS CCA 72 bp AGCAGCGTTTATCCAGGGGCCAGGCAGGCCGCCCCTTaGGGTACAGGGAAGAAGCCCTTCCAGAGGAATGAG +
Preference number: 6 (lower is better)
Translates to: SSVYPGARQAAP*GTGKKPFQRNE
Trigger: CTCATTCCTCTGGAAGGGCTTCTTCCCTGTACCCCAAGGGGCGGCCTGCCTGGCCCCTGGATAAACGCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335146.11
CDS CCA 72 bp TTCTGGTGGTGCTCGGGGATGATGTCGGCCAGCAGCTaGTACTCGCTCTGCGCCAGCTTGACGAAGGCACTG +
Preference number: 6 (lower is better)
Translates to: FWWCSGMMSASS*YSLCASLTKAL
Trigger: CAGTGCCTTCGTCAAGCTGGCGCAGAGCGAGTACCAGCTGCTGGCCGACATCATCCCCGAGCACCACCAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000411744.6
ENST00000467586.5
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
ENST00000634349.1
CDS CCA 72 bp CAGTCAGCCTCTGGCTGTTGCAGAGATGGGCCAGGATaGGGGCTCACCTGGCCGCTTGACTGGCTTCTTGGT +
Preference number: 6 (lower is better)
Translates to: QSASGCCRDGPG*GLTWPLDWLLG
Trigger: ACCAAGAAGCCAGTCAAGCGGCCAGGTGAGCCCCCATCCTGGCCCATCTCTGCAACAGCCAGAGGCTGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405068.3
CDS CCA 72 bp CCAGCACATCATCGAGCTGCGGGCAGCATCTCTCAGTaGCCAGACATAGCCGGGCTTGCCAAGCTGTGGCTG +
Preference number: 6 (lower is better)
Translates to: PAHHRAAGSISQ*PDIAGLAKLWL
Trigger: CAGCCACAGCTTGGCAAGCCCGGCTATGTCTGGCCACTGAGAGATGCTGCCCGCAGCTCGATGATGTGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405068.3
CDS CCA 72 bp GCCACCTCAAGGAGGCTGGCACTGGGGTCATCCATGTaGGCAAATGCGGGGCCTGTGAAGGAAGTGACCAGC +
Preference number: 6 (lower is better)
Translates to: ATSRRLALGSSM*ANAGPVKEVTS
Trigger: GCTGGTCACTTCCTTCACAGGCCCCGCATTTGCCCACATGGATGACCCCAGTGCCAGCCTCCTTGAGGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467586.5
CDS CAA 72 bp CAGCATGTCATCTCTCCCTGGGGGATGGCACAACTCTaGAGCTGCTGGTCTGGGGCCAGCCACACTCCTGGC +
Preference number: 6 (lower is better)
Translates to: QHVISPWGMAQL*SCWSGASHTPG
Trigger: GCCAGGAGTGTGGCTGGCCCCAGACCAGCAGCTCAAGAGTTGTGCCATCCCCCAGGGAGAGATGACATGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467586.5
CDS TCA 72 bp GGCCTAGGCAGGGGCTCTGCCTCAGGCGGGATTCGCTaGGCACCTGTGTTACTCCCCTACTCCAAAGAAGCT +
Preference number: 6 (lower is better)
Translates to: GLGRGSASGGIR*APVLLPYSKEA
Trigger: AGCTTCTTTGGAGTAGGGGAGTAACACAGGTGCTCAGCGAATCCCGCCTGAGGCAGAGCCCCTGCCTAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405068.3
CDS TCA 72 bp AGCATGTCATCTCTCCCTGGGGGATGGCACAACTCTTaGGCTGCTGGTCTGGGGCCAGCCACACTCCTGGCT +
Preference number: 6 (lower is better)
Translates to: SMSSLPGGWHNS*AAGLGPATLLA
Trigger: AGCCAGGAGTGTGGCTGGCCCCAGACCAGCAGCTCAAGAGTTGTGCCATCCCCCAGGGAGAGATGACATGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467586.5
CDS TCA 72 bp CTCCCTGGTGTCCTCAGGCAGCACCCACATTGCTGGTaGGCTCGTGTACGGTGCCGTCCTTCGGCATGTTGT +
Preference number: 6 (lower is better)
Translates to: LPGVLRQHPHCW*ARVRCRPSACC
Trigger: ACAACATGCCGAAGGACGGCACCGTACACGAGCTCACCAGCAATGTGGGTGCTGCCTGAGGACACCAGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467586.5
CDS TCA 72 bp AGGACACCTTCCAACCAACCAGCACCGCTCCCAGAGTaGGGACACTGCTTCCAGGGCGAGGACGGTCAAAGG +
Preference number: 6 (lower is better)
Translates to: RTPSNQPAPLPE*GHCFQGEDGQR
Trigger: CCTTTGACCGTCCTCGCCCTGGAAGCAGTGTCCTCACTCTGGGAGCGGTGCTGGTTGGTTGGAAGGTGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486053.1
CDS GCA 72 bp GGAGCACCTATCCCCTTGCTATCCCAGCATCCTGGCTaGAGTAGTGTGCCTGGCCTTCTGACAGGGCGACGT +
Preference number: 6 (lower is better)
Translates to: GAPIPLLSQHPG*SSVPGLLTGRR
Trigger: ACGTCGCCCTGTCAGAAGGCCAGGCACACTACTGCAGCCAGGATGCTGGGATAGCAAGGGGATAGGTGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405068.3
CDS GCA 72 bp AAGGAGGCTGGCACTGGGGTCATCCATGTGGGCAAATaGGGGGCCTGTGAAGGAAGTGACCAGCCCAGTCAG +
Preference number: 6 (lower is better)
Translates to: KEAGTGVIHVGK*GACEGSDQPSQ
Trigger: CTGACTGGGCTGGTCACTTCCTTCACAGGCCCCGCATTTGCCCACATGGATGACCCCAGTGCCAGCCTCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467586.5
CDS CCA 72 bp GGCATCGGTCTCCACGTCCAGCATGTCATCTCTCCCTaGGGGATGGCACAACTCTTGAGCTGCTGGTCTGGG +
Preference number: 6 (lower is better)
Translates to: GIGLHVQHVISP*GMAQLLSCWSG
Trigger: CCCAGACCAGCAGCTCAAGAGTTGTGCCATCCCCCAGGGAGAGATGACATGCTGGACGTGGAGACCGATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467586.5
CDS TCA 72 bp AGAGGACAGGAGTTCCCCGTGACCGACTCTGTGTCCTaGGGTGCTGAGAAGGAAGAGTGCGTGGTGGCACAG +
Preference number: 6 (lower is better)
Translates to: RGQEFPVTDSVS*GAEKEECVVAQ
Trigger: CTGTGCCACCACGCACTCTTCCTTCTCAGCACCTCAGGACACAGAGTCGGTCACGGGGAACTCCTGTCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494787.6
CDS GCA 72 bp GGGCAGCATCTCTCAGTGGCCAGACATAGCCGGGCTTaGCAAGCTGTGGCTGGCAGAGACACTGTTTACCTG +
Preference number: 6 (lower is better)
Translates to: GQHLSVARHSRA*QAVAGRDTVYL
Trigger: CAGGTAAACAGTGTCTCTGCCAGCCACAGCTTGGCAAGCCCGGCTATGTCTGGCCACTGAGAGATGCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405068.3
CDS GCA 72 bp CCCTCCACAGACTGGAGATACCTCCTCACTGCTACCTaGCCTCTAACCCCATGTCTCCAGGCAAGGAGGCGA +
Preference number: 6 (lower is better)
Translates to: PSTDWRYLLTAT*PLTPCLQARRR
Trigger: TCGCCTCCTTGCCTGGAGACATGGGGTTAGAGGGCAGGTAGCAGTGAGGAGGTATCTCCAGTCTGTGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486053.1
CDS CCA 72 bp AGGGCATCCTGTATCAGGGAGTCGAAGGTCTTCTTCTaGTGGTGCTCGGGGATGATGTCGGCCAGCAGCTGG +
Preference number: 6 (lower is better)
Translates to: RASCIRESKVFF*WCSGMMSASSW
Trigger: CCAGCTGCTGGCCGACATCATCCCCGAGCACCACCAGAAGAAGACCTTCGACTCCCTGATACAGGATGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000411744.6
ENST00000467586.5
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
ENST00000634349.1
CDS CCA 72 bp CAGGCTGGGCTGGCAGTCCCCATTTGCAGCAGGTTTTaGCTGGTGGGCAGGATTTCCACACTGGAGGGAGAA +
Preference number: 6 (lower is better)
Translates to: QAGLAVPICSRF*LVGRISTLEGE
Trigger: TTCTCCCTCCAGTGTGGAAATCCTGCCCACCAGCCAAAACCTGCTGCAAATGGGGACTGCCAGCCCAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405068.3
CDS CCA 72 bp CAGCCTTCCCCCACTCTTCCCCAAACACCCTTGGTCTaGGCCTGTCTCCTGTGTCCTGATGGCCACATGCAT +
Preference number: 6 (lower is better)
Translates to: QPSPTLPQTPLV*ACLLCPDGHMH
Trigger: ATGCATGTGGCCATCAGGACACAGGAGACAGGCCCAGACCAAGGGTGTTTGGGGAAGAGTGGGGGAAGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465252.5
CDS CAA 72 bp ACAGGCTGGGCTGGCAGTCCCCATTTGCAGCAGGTTTaGGCTGGTGGGCAGGATTTCCACACTGGAGGGAGA +
Preference number: 6 (lower is better)
Translates to: TGWAGSPHLQQV*AGGQDFHTGGR
Trigger: TCTCCCTCCAGTGTGGAAATCCTGCCCACCAGCCAAAACCTGCTGCAAATGGGGACTGCCAGCCCAGCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405068.3
CDS TCA 72 bp AGACACCCCTTCCCAGCCCAGGTCTTGAGCCCACCTTaGCTCCCGGCTGGAACACAGGTAGATTCTTCTCTG +
Preference number: 6 (lower is better)
Translates to: RHPFPAQVLSPP*LPAGTQVDSSL
Trigger: CAGAGAAGAATCTACCTGTGTTCCAGCCGGGAGTCAAGGTGGGCTCAAGACCTGGGCTGGGAAGGGGTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465252.5
CDS GCA 72 bp TCCTGTATCAGGGAGTCGAAGGTCTTCTTCTGGTGGTaGTCGGGGATGATGTCGGCCAGCAGCTGGTACTCG +
Preference number: 6 (lower is better)
Translates to: SCIRESKVFFWW*SGMMSASSWYS
Trigger: CGAGTACCAGCTGCTGGCCGACATCATCCCCGAGCACCACCAGAAGAAGACCTTCGACTCCCTGATACAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000411744.6
ENST00000467586.5
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
ENST00000634349.1
CDS GCA 72 bp CCTCAACCCCTCCACAGACTGGAGATACCTCCTCACTaGTACCTGCCCTCTAACCCCATGTCTCCAGGCAAG +
Preference number: 6 (lower is better)
Translates to: PQPLHRLEIPPH*YLPSNPMSPGK
Trigger: CTTGCCTGGAGACATGGGGTTAGAGGGCAGGTAGCAGTGAGGAGGTATCTCCAGTCTGTGGAGGGGTTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486053.1
CDS CCA 72 bp GCATCCTGTATCAGGGAGTCGAAGGTCTTCTTCTGGTaGTGCTCGGGGATGATGTCGGCCAGCAGCTGGTAC +
Preference number: 6 (lower is better)
Translates to: ASCIRESKVFFW*CSGMMSASSWY
Trigger: GTACCAGCTGCTGGCCGACATCATCCCCGAGCACCACCAGAAGAAGACCTTCGACTCCCTGATACAGGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000411744.6
ENST00000467586.5
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
ENST00000634349.1
CDS CCA 72 bp AAGCTCTGGAGGGGCCTGACGCTGCGAACGCTAGATTaGACTAAAGCAGTACAGTCCCAGTCAGCCTCTGGC +
Preference number: 6 (lower is better)
Translates to: KLWRGLTLRTLD*TKAVQSQSASG
Trigger: GCCAGAGGCTGACTGGGACTGTACTGCTTTAGTCCAATCTAGCGTTCGCAGCGTCAGGCCCCTCCAGAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405068.3
CDS CCA 72 bp TGTACCTACAGTCGGGGTTACCACGACGACAAGCTCTaGAGGGGCCTGACGCTGCGAACGCTAGATTGGACT +
Preference number: 6 (lower is better)
Translates to: CTYSRGYHDDKL*RGLTLRTLDWT
Trigger: AGTCCAATCTAGCGTTCGCAGCGTCAGGCCCCTCCAGAGCTTGTCGTCGTGGTAACCCCGACTGTAGGTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405068.3
CDS CCA 72 bp TCTCAGTGGCCAGACATAGCCGGGCTTGCCAAGCTGTaGCTGGCAGAGACACTGTTTACCTGGAGCACAGAC +
Preference number: 6 (lower is better)
Translates to: SQWPDIAGLAKL*LAETLFTWSTD
Trigger: GTCTGTGCTCCAGGTAAACAGTGTCTCTGCCAGCCACAGCTTGGCAAGCCCGGCTATGTCTGGCCACTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405068.3
CDS CAA 72 bp CAGACACCCCTTCCCAGCCCAGGTCTTGAGCCCACCTaGACTCCCGGCTGGAACACAGGTAGATTCTTCTCT +
Preference number: 6 (lower is better)
Translates to: QTPLPSPGLEPT*TPGWNTGRFFS
Trigger: AGAGAAGAATCTACCTGTGTTCCAGCCGGGAGTCAAGGTGGGCTCAAGACCTGGGCTGGGAAGGGGTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465252.5
CDS GCA 72 bp GAGGTGTCGAAAAGGCGATCGATCATGTCGCCCACCTaGTCCACCCCGTACTTGATGTACTTCTCCGGGTTC +
Preference number: 6 (lower is better)
Translates to: EVSKRRSIMSPT*STPYLMYFSGF
Trigger: GAACCCGGAGAAGTACATCAAGTACGGGGTGGAGCAGGTGGGCGACATGATCGATCGCCTTTTCGACACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000411744.6
ENST00000465252.5
ENST00000467586.5
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
ENST00000634349.1
CDS CAA 90 bp CCCACATTGCTGGTGAGCTCGTGTACGGTGCCGTCCTTCGGCATGTaGTACTCCTTGTCCGGGTCATTCTGTGGAAAAACAGCCTCTGGT +
Preference number: 6 (lower is better)
Translates to: PTLLVSSCTVPSFGM*YSLSGSFCGKTASG
Trigger: ACCAGAGGCTGTTTTTCCACAGAATGACCCGGACAAGGAGTACAACATGCCGAAGGACGGCACCGTACACGAGCTCACCAGCAATGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467586.5
CDS TCA 72 bp TGCCAAACTTCTGTAGAAAGGCCCCGTAGGTCTCCTTaGCAATGGTCTTCTGGGCCTGGCGAATCCTGTCCC +
Preference number: 6 (lower is better)
Translates to: CQTSVERPRRSP*QWSSGPGESCP
Trigger: GGGACAGGATTCGCCAGGCCCAGAAGACCATTGTCAAGGAGACCTACGGGGCCTTTCTACAGAAGTTTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000332065.9
ENST00000335146.11
ENST00000357231.8
ENST00000405575.8
ENST00000411744.6
ENST00000465252.5
ENST00000467586.5
ENST00000467929.6
ENST00000589210.6
ENST00000607838.5
ENST00000634349.1
CDS GCA 72 bp CACGTCTCCCTTGCTCATGCTCTCCCCTTCAGCGAGTaGGGCTTACTAATGAGTGAATCTGATTCCTGCCCC +
Preference number: 6 (lower is better)
Translates to: HVSLAHALPFSE*GLLMSESDSCP
Trigger: GGGGCAGGAATCAGATTCACTCATTAGTAAGCCGCACTCGCTGAAGGGGAGAGCATGAGCAAGGGAGACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405068.3
CDS CCA 72 bp CTTCGGCATGTTGTACTCCTTGTCCGGGTCATTCTGTaGAAAAACAGCCTCTGGTTCCCTGAAGCAGCCCCC +
Preference number: 6 (lower is better)
Translates to: LRHVVLLVRVIL*KNSLWFPEAAP
Trigger: GGGGGCTGCTTCAGGGAACCAGAGGCTGTTTTTCCACAGAATGACCCGGACAAGGAGTACAACATGCCGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467586.5
CDS CAA 72 bp GAGGGTGGCCTGCCTCAGTGGCCTGGCTTGTTTCGTTaGCTAAATCTCTGGATCTACTTGGTGGGTGGTGGT +
Preference number: 6 (lower is better)
Translates to: EGGLPQWPGLFR*LNLWIYLVGGG
Trigger: ACCACCACCCACCAAGTAGATCCAGAGATTTAGCAAACGAAACAAGCCAGGCCACTGAGGCAGGCCACCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465252.5
CDS CCA 72 bp ACTTCAGATCACCCTGCCTTTCTGGAAGGTGAAGGTTaGAGCACCTATCCCCTTGCTATCCCAGCATCCTGG +
Preference number: 6 (lower is better)
Translates to: TSDHPAFLEGEG*STYPLAIPASW
Trigger: CCAGGATGCTGGGATAGCAAGGGGATAGGTGCTCCAACCTTCACCTTCCAGAAAGGCAGGGTGATCTGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405068.3
CDS CCA 72 bp AGTTTTCCTCTAGTGTCTCTGGCCCAAGGATGGATGTaGTCCACTGTGAGCCACCTGAGATCAGATCCCTCC +
Preference number: 6 (lower is better)
Translates to: SFPLVSLAQGWM*STVSHLRSDPS
Trigger: GGAGGGATCTGATCTCAGGTGGCTCACAGTGGACCACATCCATCCTTGGGCCAGAGACACTAGAGGAAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405068.3
CDS CAA 72 bp GCCGAAGAGCTGGTCTCTCGGGGGTCTAAAGGAATATaGTATGTGTCCCCAAGAACTTGGGAGGCCAGCATG +
Preference number: 6 (lower is better)
Translates to: AEELVSRGSKGI*YVSPRTWEASM
Trigger: CATGCTGGCCTCCCAAGTTCTTGGGGACACATACAATATTCCTTTAGACCCCCGAGAGACCAGCTCTTCGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000460476.5
ENST00000467929.6
ENST00000607838.5
CDS CAA 72 bp TCGTGTACGGTGCCGTCCTTCGGCATGTTGTACTCCTaGTCCGGGTCATTCTGTGGAAAAACAGCCTCTGGT +
Preference number: 6 (lower is better)
Translates to: SCTVPSFGMLYS*SGSFCGKTASG
Trigger: ACCAGAGGCTGTTTTTCCACAGAATGACCCGGACAAGGAGTACAACATGCCGAAGGACGGCACCGTACACGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467586.5
CDS CAA 72 bp AAGCCCTTAAAACGCTCCTTGATAATCTGCCGCTCCTaGTCCCGGAGCTGGGAAGCCAGGAGAGATAGCAGA +
Preference number: 6 (lower is better)
Translates to: KPLKRSLIICRS*SRSWEARRDSR
Trigger: TCTGCTATCTCTCCTGGCTTCCCAGCTCCGGGACAAGGAGCGGCAGATTATCAAGGAGCGTTTTAAGGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465252.5
CDS GCA 72 bp GCAGAGACTGATATCCCCAAGCTTCTCACGTTATTCTaGGGACCCCTTACCACTTTGTTGAGTTCCGGGCTG +
Preference number: 6 (lower is better)
Translates to: AETDIPKLLTLF*GPLTTLLSSGL
Trigger: CAGCCCGGAACTCAACAAAGTGGTAAGGGGTCCGCAGAATAACGTGAGAAGCTTGGGGATATCAGTCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406660.4
CDS CCA 72 bp AGCTGGAGTTTTCCTCTAGTGTCTCTGGCCCAAGGATaGATGTGGTCCACTGTGAGCCACCTGAGATCAGAT +
Preference number: 6 (lower is better)
Translates to: SWSFPLVSLAQG*MWSTVSHLRSD
Trigger: ATCTGATCTCAGGTGGCTCACAGTGGACCACATCCATCCTTGGGCCAGAGACACTAGAGGAAAACTCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405068.3
CDS CCA 72 bp CTGCGGACACATGTTCCCATGGGAGAATGTTGCACGTaGCAGCTGATTTCTGTCCAAATCACAGCCAGTGAG +
Preference number: 6 (lower is better)
Translates to: LRTHVPMGECCT*QLISVQITASE
Trigger: CTCACTGGCTGTGATTTGGACAGAAATCAGCTGCCACGTGCAACATTCTCCCATGGGAACATGTGTCCGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589507.6
CDS CAA 90 bp CTGATGGCCACATGCATCCTTTGCTCTCTGATCCCAGAGGGATGCTaGTCCACTTTTTCCCAGAGACACGACAAAAAGTATCCCGTCTGC +
Preference number: 6 (lower is better)
Translates to: LMATCILCSLIPEGC*STFSQRHDKKYPVC
Trigger: GCAGACGGGATACTTTTTGTCGTGTCTCTGGGAAAAAGTGGACAAGCATCCCTCTGGGATCAGAGAGCAAAGGATGCATGTGGCCATCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000465252.5
CDS TCA 72 bp CACATGTTCCCATGGGAGAATGTTGCACGTGGCAGCTaGTTTCTGTCCAAATCACAGCCAGTGAGGCCATTC +
Preference number: 6 (lower is better)
Translates to: HMFPWENVARGS*FLSKSQPVRPF
Trigger: GAATGGCCTCACTGGCTGTGATTTGGACAGAAATCAGCTGCCACGTGCAACATTCTCCCATGGGAACATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589507.6
CDS CCA 72 bp GGAGGGAAGATTCCTGAATCAGCGTCCTGGATAAGGTaGTTTGACCCCAGGACTGAGCATTCTGAGTTGTAC +
Preference number: 6 (lower is better)
Translates to: GGKIPESASWIR*FDPRTEHSELY
Trigger: GTACAACTCAGAATGCTCAGTCCTGGGGTCAAACCACCTTATCCAGGACGCTGATTCAGGAATCTTCCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467586.5
CDS CAA 90 bp CCTCAGTGGCCTGGCTTGTTTCGTTTGCTAAATCTCTGGATCTACTaGGTGGGTGGTGGTAGGAAGGGATGTGGGTCACAACTAAGCAAA +
Preference number: 6 (lower is better)
Translates to: PQWPGLFRLLNLWIY*VGGGRKGCGSQLSK
Trigger: TTTGCTTAGTTGTGACCCACATCCCTTCCTACCACCACCCACCAAGTAGATCCAGAGATTTAGCAAACGAAACAAGCCAGGCCACTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465252.5
CDS GCA 72 bp GCCACATGCATCCTTTGCTCTCTGATCCCAGAGGGATaGTTGTCCACTTTTTCCCAGAGACACGACAAAAAG +
Preference number: 6 (lower is better)
Translates to: ATCILCSLIPEG*LSTFSQRHDKK
Trigger: CTTTTTGTCGTGTCTCTGGGAAAAAGTGGACAAGCATCCCTCTGGGATCAGAGAGCAAAGGATGCATGTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000465252.5
CDS CAA 72 bp CCTGGCTTGTTTCGTTTGCTAAATCTCTGGATCTACTaGGTGGGTGGTGGTAGGAAGGGATGTGGGTCACAA +
Preference number: 6 (lower is better)
Translates to: PGLFRLLNLWIY*VGGGRKGCGSQ
Trigger: TTGTGACCCACATCCCTTCCTACCACCACCCACCAAGTAGATCCAGAGATTTAGCAAACGAAACAAGCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465252.5
CDS CCA 72 bp AGGATGCTCTGGGGTTTCTTTCCTTTCTGGATCAACTaGGAAAGTGAAATTCTCCCCATCCAGCTCTCAGCT +
Preference number: 6 (lower is better)
Translates to: RMLWGFFPFWIN*ESEILPIQLSA
Trigger: AGCTGAGAGCTGGATGGGGAGAATTTCACTTTCCCAGTTGATCCAGAAAGGAAAGAAACCCCAGAGCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405068.3
CDS TCA 72 bp ATTCGTGAAGATCAAAGAAACGAAATCACCAGGCAGTaGTACCAGGGCTGGATAGTCACCTTCTGGCACCTT +
Preference number: 6 (lower is better)
Translates to: IREDQRNEITRQ*YQGWIVTFWHL
Trigger: AAGGTGCCAGAAGGTGACTATCCAGCCCTGGTATCACTGCCTGGTGATTTCGTTTCTTTGATCTTCACGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589507.6
CDS CAA 72 bp ACATGCATCCTTTGCTCTCTGATCCCAGAGGGATGCTaGTCCACTTTTTCCCAGAGACACGACAAAAAGTAT +
Preference number: 6 (lower is better)
Translates to: TCILCSLIPEGC*STFSQRHDKKY
Trigger: ATACTTTTTGTCGTGTCTCTGGGAAAAAGTGGACAAGCATCCCTCTGGGATCAGAGAGCAAAGGATGCATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000465252.5