RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EXOC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000090989

Ensembl transcript IDs: ENST00000346134.11, ENST00000349598.6, ENST00000381295.7, ENST00000504321.1, ENST00000505501.1, ENST00000506936.1, ENST00000509302.5, ENST00000511971.5

Found 313 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTTAGTAGTTACATGATTAGCAAGCAACAGAGAAGTAGTGAAAGCTaGAGAACTCCAAATGCATTGCTCATAGGACAACCACTCAAACAC +
Preference number: 1 (lower is better)
Translates to: FSSYMISKQQRSSES*RTPNALLIGQPLKH
Trigger: GTGTTTGAGTGGTTGTCCTATGAGCAATGCATTTGGAGTTCTTCAGCTTTCACTACTTCTCTGTTGCTTGCTAATCATGTAACTACTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
3UTR-3UTR GCA 90 bp CCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGGGTTCTCAAAACAGTTaGTTGGTATTTTGGTATAGT +
Preference number: 2 (lower is better)
Translates to: PLKHKQLGNKGKFPIQSLGSQNS*LVFWYS
Trigger: ACTATACCAAAATACCAAGCAACTGTTTTGAGAACC...CAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
3UTR-3UTR GCA 90 bp TCTAAGTTCACAAATGATCATCACATGAGCCCTCTTCTCCATATACACATTTGTCTGAAGAACTCCAAATaGATTGCTCATAGGACAACC +
Preference number: 2 (lower is better)
Translates to: SKFTNDHHMSPLLHIHICLKNSK*IAHRTT
Trigger: GGTTGTCCTATGAGCAATGCATTTGGAGTTCTTCAG...ACAAATGTGTATATGGAGAAGAGGGCTCATGTGATGATCATTTGTGAACTTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
3UTR-3UTR TCA 90 bp TCTAAGTTCACAAATGATCATCACATGAGCCCTCTTCTCCATATACACATTTGTAGAAGTAGTGAAAGCTaGAGAACTCCAAATGCATTG +
Preference number: 2 (lower is better)
Translates to: SKFTNDHHMSPLLHIHICRSSES*RTPNAL
Trigger: CAATGCATTTGGAGTTCTTCAGCTTTCACTACTTCT...ACAAATGTGTATATGGAGAAGAGGGCTCATGTGATGATCATTTGTGAACTTAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
3UTR-3UTR CAA 90 bp CCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGTCTCAAAACAGTTGCTaGGTATTTTGGTATAGTGTC +
Preference number: 3 (lower is better)
Translates to: PLKHKQLGNKGKFPIQSLSQNSC*VFWYSV
Trigger: GACACTATACCAAAATACCAAGCAACTGTTTTGAGA...CAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
3UTR TCA 72 bp TACATGATTAGCAAGCAACAGAGAAGTAGTGAAAGCTaGAGAACTCCAAATGCATTGCTCATAGGACAACCA +
Preference number: 3 (lower is better)
Translates to: YMISKQQRSSES*RTPNALLIGQP
Trigger: TGGTTGTCCTATGAGCAATGCATTTGGAGTTCTTCAGCTTTCACTACTTCTCTGTTGCTTGCTAATCATGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
3UTR-3UTR CAA 90 bp TCTAAGTTCACAAATGATCATCACATGAGCCCTCTTCTCCATATACACATTTGTTCTCAAAACAGTTGCTaGGTATTTTGGTATAGTGTC +
Preference number: 3 (lower is better)
Translates to: SKFTNDHHMSPLLHIHICSQNSC*VFWYSV
Trigger: GACACTATACCAAAATACCAAGCAACTGTTTTGAGA...ACAAATGTGTATATGGAGAAGAGGGCTCATGTGATGATCATTTGTGAACTTAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
3UTR TCA 72 bp ATCCTCAAAAATCTAAGTTCACAAATGATCATCACATaGGCCCTCTTCTCCATATACACATTTGTTAGTGTG +
Preference number: 3 (lower is better)
Translates to: ILKNLSSQMIIT*ALFSIYTFVSV
Trigger: CACACTAACAAATGTGTATATGGAGAAGAGGGCTCATGTGATGATCATTTGTGAACTTAGATTTTTGAGGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp GCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAAAGCGCAAGGCCGGACTaGGCCTGGCTGTGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: ALLIGQPLKHKQLGNKGKSARPD*AWLCRG
Trigger: GCCTCGGCACAGCCAGGCTCAGTCCGGCCTTGCGCT...TTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000346134.11
ENST00000349598.6
CDS-3UTR TCA 90 bp CCAAATGCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAACCGCAAGGCCGGACTaGGCCTGGCTGTGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: PNALLIGQPLKHKQLGNKTARPD*AWLCRG
Trigger: GCCTCGGCACAGCCAGGCTCAGTCCGGCCTTGCGGT...TTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGCATTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381295.7
CDS-3UTR GCA 90 bp CACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGAGAAATGCTGGTCAGAAGGAGCGGTaGCCGACCCCAGGCGTGGAG +
Preference number: 4 (lower is better)
Translates to: HKQLGNKGKFPIQSLRNAGQKER*PTPGVE
Trigger: CTCCACGCCTGGGGTCGGGCACCGCTCCTTCTGACC...AGCATTTCTCAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381295.7
CDS-3UTR TCA 90 bp GCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAAAGACAGCAGCCGGACTaGGGAGCCGCCTTAGACCCT +
Preference number: 4 (lower is better)
Translates to: ALLIGQPLKHKQLGNKGKRQQPD*GAALDP
Trigger: AGGGTCTAAGGCGGCTCCTCAGTCCGGCTGCTGTCT...TTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381295.7
CDS-3UTR TCA 90 bp GTACAGTATTTTAGTAGTTACATGATTAGCAAGCAACAGAGAAGTAGTGAAAGCAGCGCAAGGCCGGACTaGGCCTGGCTGTGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: VQYFSSYMISKQQRSSESSARPD*AWLCRG
Trigger: GCCTCGGCACAGCCAGGCTCAGTCCGGCCTTGCGCT...GCTTTCACTACTTCTCTGTTGCTTGCTAATCATGTAACTACTAAAATACTGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346134.11
ENST00000349598.6
CDS-3UTR CCA 90 bp GCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAAAGCCGCCTTAGACCCTaGTGCCTGTCAGCTCGTCTG +
Preference number: 4 (lower is better)
Translates to: ALLIGQPLKHKQLGNKGKSRLRP*CLSARL
Trigger: CAGACGAGCTGACAGGCACCAGGGTCTAAGGCGGCT...TTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000381295.7
CDS-3UTR TCA 90 bp AATGCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGGACCCTCAATAAAGCGTTaGACGGGAAGCGGCCGTTCC +
Preference number: 4 (lower is better)
Translates to: NALLIGQPLKHKQLGNKGPSIKR*TGSGRS
Trigger: GGAACGGCCGCTTCCCGTTCAACGCTTTATTGAGGG...TCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000346134.11
ENST00000381295.7
CDS-3UTR GCA 90 bp CCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGCTCCCTTATGCCCTGTaGCACGCGAGCTTCAACACC +
Preference number: 4 (lower is better)
Translates to: PLKHKQLGNKGKFPIQSLLPYAL*HASFNT
Trigger: GGTGTTGAAGCTCGCGTGGCACAGGGCATAAGGGAG...CAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp CCAAATGCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAACTCCCTTATGCCCTGTaGCACGCGAGCTTCAACACC +
Preference number: 4 (lower is better)
Translates to: PNALLIGQPLKHKQLGNKLPYAL*HASFNT
Trigger: GGTGTTGAAGCTCGCGTGGCACAGGGCATAAGGGAG...TTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGCATTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CCA 90 bp CCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGAAAACGGAGACCGGATaGGGGCCACTAGGATACGCC +
Preference number: 4 (lower is better)
Translates to: PLKHKQLGNKGKFPIQSLKTETG*GPLGYA
Trigger: GGCGTATCCTAGTGGCCCCCATCCGGTCTCCGTTTT...CAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000346134.11
ENST00000381295.7
CDS-3UTR TCA 90 bp CCAAATGCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAAAAACATTGTTGAGGTaGCTGGCCAGTCTCCGGGCA +
Preference number: 4 (lower is better)
Translates to: PNALLIGQPLKHKQLGNKKTLLR*LASLRA
Trigger: TGCCCGGAGACTGGCCAGTCACCTCAACAATGTTTT...TTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGCATTTGG
47% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp AATGCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGGATCCATCCAGGTCCTCTaGTTCAGCCATAGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: NALLIGQPLKHKQLGNKGSIQVL*FSHSSR
Trigger: CCTGGAACTATGGCTGAAGCAGAGGACCTGGATGGA...TCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp CCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGTCCATCCAGGTCCTCTaGTTCAGCCATAGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: PLKHKQLGNKGKFPIQSLSIQVL*FSHSSR
Trigger: CCTGGAACTATGGCTGAAGCAGAGGACCTGGATGGA...CAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CCA 90 bp AATGCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGGAGCCAGAAGCAAGTCATaGCCTGGTCGAAGAGCTACA +
Preference number: 4 (lower is better)
Translates to: NALLIGQPLKHKQLGNKGARSKS*PGRRAT
Trigger: TGTAGCTCTTCGACCAGGCCATGACTTGCTTCTGGC...TCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp AATGCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGGAGCTCTCGCAAATCACTaGATCGCTGCTGTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: NALLIGQPLKHKQLGNKGALANH*IAAVAV
Trigger: AACAGCAACAGCAGCGATTCAGTGATTTGCGAGAGC...TCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp GCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAAGCTCTCGCAAATCACTaGATCGCTGCTGTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: ALLIGQPLKHKQLGNKGKALANH*IAAVAV
Trigger: AACAGCAACAGCAGCGATTCAGTGATTTGCGAGAGC...TTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp CCAAATGCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAATCCAACAGGGAAGATaGCTGAGATCTGCGATTCCC +
Preference number: 4 (lower is better)
Translates to: PNALLIGQPLKHKQLGNKIQQGR*LRSAIP
Trigger: GGGAATCGCAGATCTCAGTCATCTTCCCTGTTGGAT...TTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGCATTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp CCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGATCCAACAGGGAAGATaGCTGAGATCTGCGATTCCC +
Preference number: 4 (lower is better)
Translates to: PLKHKQLGNKGKFPIQSLIQQGR*LRSAIP
Trigger: GGGAATCGCAGATCTCAGTCATCTTCCCTGTTGGAT...CAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp AATGCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGGATTGACCACCTTAACCTaGACAGGGCGTTCAGTTGTC +
Preference number: 4 (lower is better)
Translates to: NALLIGQPLKHKQLGNKGLTTLT*TGRSVV
Trigger: GACAACTGAACGCCCTGTGCAGGTTAAGGTGGTCAA...TCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp GCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAAGCCCCATCTAGCACCTaGAGCTCTCTGGACAATTTT +
Preference number: 4 (lower is better)
Translates to: ALLIGQPLKHKQLGNKGKAPSST*SSLDNF
Trigger: AAAATTGTCCAGAGAGCTGCAGGTGCTAGATGGGGC...TTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp GCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAATGGTGCAGGCCTCAATaGCTCTGGAAGAAGCAAGAT +
Preference number: 4 (lower is better)
Translates to: ALLIGQPLKHKQLGNKGKWCRPQ*LWKKQD
Trigger: ATCTTGCTTCTTCCAGAGGCATTGAGGCCTGCACCA...TTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp CCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGTGGTGCAGGCCTCAATaGCTCTGGAAGAAGCAAGAT +
Preference number: 4 (lower is better)
Translates to: PLKHKQLGNKGKFPIQSLWCRPQ*LWKKQD
Trigger: ATCTTGCTTCTTCCAGAGGCATTGAGGCCTGCACCA...CAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp AATGCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGGAGCTACATTCATGCACTaGAGAAGGGCATCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: NALLIGQPLKHKQLGNKGATFMH*RRASAA
Trigger: TGCTGCTGATGCCCTTCTGCAGTGCATGAATGTAGC...TCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp AATGCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGGACTGAATCGCTGCTGTTaGTGTTTGACTGCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: NALLIGQPLKHKQLGNKGLNRCC*CLTARS
Trigger: GCTTCTGGCAGTCAAACAGCAACAGCAGCGATTCAG...TCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp CCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGCTGAATCGCTGCTGTTaGTGTTTGACTGCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: PLKHKQLGNKGKFPIQSLLNRCC*CLTARS
Trigger: GCTTCTGGCAGTCAAACAGCAACAGCAGCGATTCAG...CAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp CACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGAGAAATGCTTCCATCCAGGTCCTCTaGTTCAGCCATAGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: HKQLGNKGKFPIQSLRNASIQVL*FSHSSR
Trigger: CCTGGAACTATGGCTGAAGCAGAGGACCTGGATGGA...AGCATTTCTCAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp AGTCTGGGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTCTTCCTCCTCCCTTATaGCCTGTGCCACGCGAGCTT +
Preference number: 4 (lower is better)
Translates to: SLGSQNSCLVFWYSVCYTLPPPL*PVPREL
Trigger: AAGCTCGCGTGGCACAGGGCATAAGGGAGGAGGAAG...AGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACCCAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp GTACAGTATTTTAGTAGTTACATGATTAGCAAGCAACAGAGAAGTAGTGAAAGCCGCCTTAGACCCTGGTaGCTGTCAGCTCGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: VQYFSSYMISKQQRSSESRLRPW*LSARLS
Trigger: GGACAGACGAGCTGACAGGCACCAGGGTCTAAGGCG...GCTTTCACTACTTCTCTGTTGCTTGCTAATCATGTAACTACTAAAATACTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381295.7
CDS-3UTR CCA 90 bp CACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGAGAAATGCTGCCAGAAGCAAGTCATaGCCTGGTCGAAGAGCTACA +
Preference number: 4 (lower is better)
Translates to: HKQLGNKGKFPIQSLRNAARSKS*PGRRAT
Trigger: TGTAGCTCTTCGACCAGGCCATGACTTGCTTCTGGC...AGCATTTCTCAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CCA 90 bp CCAAATGCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGCCACTCCATCAGCTTaGCATATCGGAGCAAATCTC +
Preference number: 4 (lower is better)
Translates to: PNALLIGQPLKHKQLGNKATPSA*HIGANL
Trigger: GAGATTTGCTCCGATATGCCAAGCTGATGGAGTGGC...TTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGCATTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CCA 90 bp GCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAAGCCACTCCATCAGCTTaGCATATCGGAGCAAATCTC +
Preference number: 4 (lower is better)
Translates to: ALLIGQPLKHKQLGNKGKATPSA*HIGANL
Trigger: GAGATTTGCTCCGATATGCCAAGCTGATGGAGTGGC...TTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CCA 90 bp CCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGGCCACTCCATCAGCTTaGCATATCGGAGCAAATCTC +
Preference number: 4 (lower is better)
Translates to: PLKHKQLGNKGKFPIQSLATPSA*HIGANL
Trigger: GAGATTTGCTCCGATATGCCAAGCTGATGGAGTGGC...CAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp CCAAATGCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAACCTCCTGTCACACTCTaGTTTTCTCCACTTGGAACA +
Preference number: 4 (lower is better)
Translates to: PNALLIGQPLKHKQLGNKPPVTL*FSPLGT
Trigger: TGTTCCAAGTGGAGAAAATCAGAGTGTGACAGGAGG...TTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGCATTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp GCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAATTCAGATGCCATGATTaGCTGGATGTTAGCCCCATC +
Preference number: 4 (lower is better)
Translates to: ALLIGQPLKHKQLGNKGKFRCHD*LDVSPI
Trigger: GATGGGGCTAACATCCAGTCAATCATGGCATCTGAA...TTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp CCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGTTCAGATGCCATGATTaGCTGGATGTTAGCCCCATC +
Preference number: 4 (lower is better)
Translates to: PLKHKQLGNKGKFPIQSLFRCHD*LDVSPI
Trigger: GATGGGGCTAACATCCAGTCAATCATGGCATCTGAA...CAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp GCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAAGAACAAAAACATTGTTaGGGTGACTGGCCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: ALLIGQPLKHKQLGNKGKEQKHC*GDWPVS
Trigger: GGAGACTGGCCAGTCACCTCAACAATGTTTTTGTTC...TTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp GCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAAAACAGGGAAGATGACTaGGATCTGCGATTCCCTGAA +
Preference number: 4 (lower is better)
Translates to: ALLIGQPLKHKQLGNKGKNREDD*DLRFPE
Trigger: TTCAGGGAATCGCAGATCTCAGTCATCTTCCCTGTT...TTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp GCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAACATATCTTTCTCAGATaGAACAGGCAGTGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: ALLIGQPLKHKQLGNKGKHIFLR*NRQWCA
Trigger: GGCACACCACTGCCTGTTTCATCTGAGAAAGATATG...TTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp CCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGCATATCTTTCTCAGATaGAACAGGCAGTGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: PLKHKQLGNKGKFPIQSLHIFLR*NRQWCA
Trigger: GGCACACCACTGCCTGTTTCATCTGAGAAAGATATG...CAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp CCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGGAGTGCCACACCACCTaGAGTAAGTTCTCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: PLKHKQLGNKGKFPIQSLECHTT*SKFSSS
Trigger: TGAAGAAGAGAACTTACTTCAGGTGGTGTGGCACTC...CAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp GCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAAGAGTGCCACACCACCTaGAGTAAGTTCTCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: ALLIGQPLKHKQLGNKGKECHTT*SKFSSS
Trigger: TGAAGAAGAGAACTTACTTCAGGTGGTGTGGCACTC...TTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp GGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTCAAATGCCCTCAATAAAGCGTTaGACGGGAAGCGGCCGTTCC +
Preference number: 4 (lower is better)
Translates to: GSQNSCLVFWYSVCYTQMPSIKR*TGSGRS
Trigger: GGAACGGCCGCTTCCCGTTCAACGCTTTATTGAGGG...CATTTGAGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346134.11
ENST00000381295.7
CDS-3UTR GCA 90 bp CACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGAGAAATGCTGCTACATTCATGCACTaGAGAAGGGCATCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: HKQLGNKGKFPIQSLRNAATFMH*RRASAA
Trigger: TGCTGCTGATGCCCTTCTGCAGTGCATGAATGTAGC...AGCATTTCTCAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp CCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGGAAGAGCTACATTCATaGACTGCAGAAGGGCATCAG +
Preference number: 4 (lower is better)
Translates to: PLKHKQLGNKGKFPIQSLEELHS*TAEGHQ
Trigger: CTGATGCCCTTCTGCAGTGCATGAATGTAGCTCTTC...CAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp GTACAGTATTTTAGTAGTTACATGATTAGCAAGCAACAGAGAAGTAGTGAAAGCCTCCCTTATGCCCTGTaGCACGCGAGCTTCAACACC +
Preference number: 4 (lower is better)
Translates to: VQYFSSYMISKQQRSSESLPYAL*HASFNT
Trigger: GGTGTTGAAGCTCGCGTGGCACAGGGCATAAGGGAG...GCTTTCACTACTTCTCTGTTGCTTGCTAATCATGTAACTACTAAAATACTGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp GTACAGTATTTTAGTAGTTACATGATTAGCAAGCAACAGAGAAGTAGTGAAAGCCTTCCTCCTCCCTTATaGCCTGTGCCACGCGAGCTT +
Preference number: 4 (lower is better)
Translates to: VQYFSSYMISKQQRSSESLPPPL*PVPREL
Trigger: AAGCTCGCGTGGCACAGGGCATAAGGGAGGAGGAAG...GCTTTCACTACTTCTCTGTTGCTTGCTAATCATGTAACTACTAAAATACTGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CCA 90 bp CCAAATGCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGCACCTGCAGCTCTCTaGACAATTTTTCTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: PNALLIGQPLKHKQLGNKAPAAL*TIFLQR
Trigger: CCTTTGCAGAAAAATTGTCCAGAGAGCTGCAGGTGC...TTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGCATTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CCA 90 bp AATGCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGGAGCACCTGCAGCTCTCTaGACAATTTTTCTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: NALLIGQPLKHKQLGNKGAPAAL*TIFLQR
Trigger: CCTTTGCAGAAAAATTGTCCAGAGAGCTGCAGGTGC...TCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CCA 90 bp AATGCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGGAGATGCCATGATTGACTaGATGTTAGCCCCATCTAGC +
Preference number: 4 (lower is better)
Translates to: NALLIGQPLKHKQLGNKGDAMID*MLAPSS
Trigger: GCTAGATGGGGCTAACATCCAGTCAATCATGGCATC...TCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CCA 90 bp CCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGGATGCCATGATTGACTaGATGTTAGCCCCATCTAGC +
Preference number: 4 (lower is better)
Translates to: PLKHKQLGNKGKFPIQSLDAMID*MLAPSS
Trigger: GCTAGATGGGGCTAACATCCAGTCAATCATGGCATC...CAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CCA 90 bp GCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAAAGGCCTCAATGCCTCTaGAAGAAGCAAGATCTCCTT +
Preference number: 4 (lower is better)
Translates to: ALLIGQPLKHKQLGNKGKRPQCL*KKQDLL
Trigger: AAGGAGATCTTGCTTCTTCCAGAGGCATTGAGGCCT...TTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CCA 90 bp CCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGAGGCCTCAATGCCTCTaGAAGAAGCAAGATCTCCTT +
Preference number: 4 (lower is better)
Translates to: PLKHKQLGNKGKFPIQSLRPQCL*KKQDLL
Trigger: AAGGAGATCTTGCTTCTTCCAGAGGCATTGAGGCCT...CAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CCA 90 bp CCAAATGCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAATCCCTGGGGGTCTTCTaGCTTTCATTTGCTACTTTC +
Preference number: 4 (lower is better)
Translates to: PNALLIGQPLKHKQLGNKSLGVF*LSFATF
Trigger: GAAAGTAGCAAATGAAAGCCAGAAGACCCCCAGGGA...TTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGCATTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CCA 90 bp AATGCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGGATCCCTGGGGGTCTTCTaGCTTTCATTTGCTACTTTC +
Preference number: 4 (lower is better)
Translates to: NALLIGQPLKHKQLGNKGSLGVF*LSFATF
Trigger: GAAAGTAGCAAATGAAAGCCAGAAGACCCCCAGGGA...TCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CCA 90 bp GGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTCAAATGAAAACGGAGACCGGATaGGGGCCACTAGGATACGCC +
Preference number: 4 (lower is better)
Translates to: GSQNSCLVFWYSVCYTQMKTETG*GPLGYA
Trigger: GGCGTATCCTAGTGGCCCCCATCCGGTCTCCGTTTT...CATTTGAGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000346134.11
ENST00000381295.7
CDS-3UTR TCA 90 bp AGTCTGGGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTAAAACATTGTTGAGGTaGCTGGCCAGTCTCCGGGCA +
Preference number: 4 (lower is better)
Translates to: SLGSQNSCLVFWYSVCYTKTLLR*LASLRA
Trigger: TGCCCGGAGACTGGCCAGTCACCTCAACAATGTTTT...AGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACCCAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp AATGCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGGATGCAGACATTCACAATaGTCAGCAGGCGTTCATCAT +
Preference number: 4 (lower is better)
Translates to: NALLIGQPLKHKQLGNKGCRHSQ*SAGVHH
Trigger: ATGATGAACGCCTGCTGAGCATTGTGAATGTCTGCA...TCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp CCAAATGCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAAGGGTCCACATTTTGTaGAGTCCACACATGATGACT +
Preference number: 4 (lower is better)
Translates to: PNALLIGQPLKHKQLGNKRVHIL*SPHMMT
Trigger: AGTCATCATGTGTGGACTGCACAAAATGTGGACCCT...TTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGCATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp CCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGAGGGTCCACATTTTGTaGAGTCCACACATGATGACT +
Preference number: 4 (lower is better)
Translates to: PLKHKQLGNKGKFPIQSLRVHIL*SPHMMT
Trigger: AGTCATCATGTGTGGACTGCACAAAATGTGGACCCT...CAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp GCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAACGTATAAATTCATCTTaGATGGAGTGCCACACCACC +
Preference number: 4 (lower is better)
Translates to: ALLIGQPLKHKQLGNKGKRINSS*MECHTT
Trigger: GGTGGTGTGGCACTCCATGCAAGATGAATTTATACG...TTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp CCAAATGCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAACGTATAAATTCATCTTaGATGGAGTGCCACACCACC +
Preference number: 4 (lower is better)
Translates to: PNALLIGQPLKHKQLGNKRINSS*MECHTT
Trigger: GGTGGTGTGGCACTCCATGCAAGATGAATTTATACG...TTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGCATTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CCA 90 bp CACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGAGAAATGCTAGGCCTCAATGCCTCTaGAAGAAGCAAGATCTCCTT +
Preference number: 4 (lower is better)
Translates to: HKQLGNKGKFPIQSLRNARPQCL*KKQDLL
Trigger: AAGGAGATCTTGCTTCTTCCAGAGGCATTGAGGCCT...AGCATTTCTCAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp AGTCTGGGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTGCTGCTGTTGCTGTTTaGCTGCCAGAAGCAAGTCAT +
Preference number: 4 (lower is better)
Translates to: SLGSQNSCLVFWYSVCYTAAVAV*LPEASH
Trigger: ATGACTTGCTTCTGGCAGTCAAACAGCAACAGCAGC...AGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACCCAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp TCTAAGTTCACAAATGATCATCACATGAGCCCTCTTCTCCATATACACATTTGTGCTCTCGCAAATCACTaGATCGCTGCTGTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: SKFTNDHHMSPLLHIHICALANH*IAAVAV
Trigger: AACAGCAACAGCAGCGATTCAGTGATTTGCGAGAGC...ACAAATGTGTATATGGAGAAGAGGGCTCATGTGATGATCATTTGTGAACTTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp GTACAGTATTTTAGTAGTTACATGATTAGCAAGCAACAGAGAAGTAGTGAAAGCAAAACATTGTTGAGGTaGCTGGCCAGTCTCCGGGCA +
Preference number: 4 (lower is better)
Translates to: VQYFSSYMISKQQRSSESKTLLR*LASLRA
Trigger: TGCCCGGAGACTGGCCAGTCACCTCAACAATGTTTT...GCTTTCACTACTTCTCTGTTGCTTGCTAATCATGTAACTACTAAAATACTGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp TCTAAGTTCACAAATGATCATCACATGAGCCCTCTTCTCCATATACACATTTGTATCCAACAGGGAAGATaGCTGAGATCTGCGATTCCC +
Preference number: 4 (lower is better)
Translates to: SKFTNDHHMSPLLHIHICIQQGR*LRSAIP
Trigger: GGGAATCGCAGATCTCAGTCATCTTCCCTGTTGGAT...ACAAATGTGTATATGGAGAAGAGGGCTCATGTGATGATCATTTGTGAACTTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp CACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGAGAAATGCTATCTCGAAGGGCCCATaGAATCTGCCTTTTGTAGAA +
Preference number: 4 (lower is better)
Translates to: HKQLGNKGKFPIQSLRNAISKGP*NLPFVE
Trigger: TTCTACAAAAGGCAGATTGCATGGGCCCTTCGAGAT...AGCATTTCTCAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp CCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGCATTCTTTTCAGCAGTaGTGCTGGCAACCCATTTAT +
Preference number: 4 (lower is better)
Translates to: PLKHKQLGNKGKFPIQSLHSFQQ*CWQPIY
Trigger: ATAAATGGGTTGCCAGCAGCACTGCTGAAAAGAATG...CAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp AATGCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGGATTCCGCATTCGAGATTaGATATTCACAGCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: NALLIGQPLKHKQLGNKGFRIRD*IFTAFH
Trigger: ATGGAAGGCTGTGAATATGCAATCTCGAATGCGGAA...TCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp CCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGTTCCGCATTCGAGATTaGATATTCACAGCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: PLKHKQLGNKGKFPIQSLFRIRD*IFTAFH
Trigger: ATGGAAGGCTGTGAATATGCAATCTCGAATGCGGAA...CAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp CCAAATGCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAATCTGGACAATTTTTCTaGAAAGGCTTCCGCATTCGA +
Preference number: 4 (lower is better)
Translates to: PNALLIGQPLKHKQLGNKSGQFF*KGFRIR
Trigger: TCGAATGCGGAAGCCTTTGCAGAAAAATTGTCCAGA...TTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGCATTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp CCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGTCTGGACAATTTTTCTaGAAAGGCTTCCGCATTCGA +
Preference number: 4 (lower is better)
Translates to: PLKHKQLGNKGKFPIQSLSGQFF*KGFRIR
Trigger: TCGAATGCGGAAGCCTTTGCAGAAAAATTGTCCAGA...CAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp AGTCTGGGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTGCCCCATCTAGCACCTaGAGCTCTCTGGACAATTTT +
Preference number: 4 (lower is better)
Translates to: SLGSQNSCLVFWYSVCYTAPSST*SSLDNF
Trigger: AAAATTGTCCAGAGAGCTGCAGGTGCTAGATGGGGC...AGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACCCAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp AGTCTGGGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTGCTACATTCATGCACTaGAGAAGGGCATCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: SLGSQNSCLVFWYSVCYTATFMH*RRASAA
Trigger: TGCTGCTGATGCCCTTCTGCAGTGCATGAATGTAGC...AGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACCCAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp TCTAAGTTCACAAATGATCATCACATGAGCCCTCTTCTCCATATACACATTTGTCTGTTGCTGTTTGACTaGCAGAAGCAAGTCATGGCC +
Preference number: 4 (lower is better)
Translates to: SKFTNDHHMSPLLHIHICLLLFD*QKQVMA
Trigger: GGCCATGACTTGCTTCTGGCAGTCAAACAGCAACAG...ACAAATGTGTATATGGAGAAGAGGGCTCATGTGATGATCATTTGTGAACTTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp AGTCTGGGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTCTGTTGCTGTTTGACTaGCAGAAGCAAGTCATGGCC +
Preference number: 4 (lower is better)
Translates to: SLGSQNSCLVFWYSVCYTLLLFD*QKQVMA
Trigger: GGCCATGACTTGCTTCTGGCAGTCAAACAGCAACAG...AGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACCCAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp GCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAAAAGATGACTGAGATCTaGGATTCCCTGAACTCTGAA +
Preference number: 4 (lower is better)
Translates to: ALLIGQPLKHKQLGNKGKKMTEI*DSLNSE
Trigger: TTCAGAGTTCAGGGAATCGCAGATCTCAGTCATCTT...TTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp CCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGGTGCCACAATTATGTTaGCGTGATAATGTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: PLKHKQLGNKGKFPIQSLVPQLC*RDNVPP
Trigger: TGGAGGAACATTATCACGGCAACATAATTGTGGCAC...CAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp AATGCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGGAGTGCCACAATTATGTTaGCGTGATAATGTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: NALLIGQPLKHKQLGNKGVPQLC*RDNVPP
Trigger: TGGAGGAACATTATCACGGCAACATAATTGTGGCAC...TCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp GCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAAGTGCCACAATTATGTTaGCGTGATAATGTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: ALLIGQPLKHKQLGNKGKVPQLC*RDNVPP
Trigger: TGGAGGAACATTATCACGGCAACATAATTGTGGCAC...TTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp CCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGGATAAGTTTGGTGTATaGTTTATCCAGGTCTCCACG +
Preference number: 4 (lower is better)
Translates to: PLKHKQLGNKGKFPIQSLDKFGV*FIQVST
Trigger: CGTGGAGACCTGGATAAAGCATACACCAAACTTATC...CAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp GCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAAAGTGGGACTGTGCAATaGTGGAACAATAATCCAGAA +
Preference number: 4 (lower is better)
Translates to: ALLIGQPLKHKQLGNKGKSGTVQ*WNNNPE
Trigger: TTCTGGATTATTGTTCCAGCATTGCACAGTCCCACT...TTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp CCAAATGCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAACTGAAGAACTCCAAATaGATTGCTCATAGGACAACC +
Preference number: 4 (lower is better)
Translates to: PNALLIGQPLKHKQLGNKLKNSK*IAHRTT
Trigger: GGTTGTCCTATGAGCAATGCATTTGGAGTTCTTCAG...TTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGCATTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp CCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGCTGAAGAACTCCAAATaGATTGCTCATAGGACAACC +
Preference number: 4 (lower is better)
Translates to: PLKHKQLGNKGKFPIQSLLKNSK*IAHRTT
Trigger: GGTTGTCCTATGAGCAATGCATTTGGAGTTCTTCAG...CAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CCA 90 bp CCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGCCTTTATATGACCTTTaGCCAAGTCCATGTGGTTCA +
Preference number: 4 (lower is better)
Translates to: PLKHKQLGNKGKFPIQSLPLYDL*PSPCGS
Trigger: TGAACCACATGGACTTGGCCAAAGGTCATATAAAGG...CAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CCA 90 bp CACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGAGAAATGCTAAGCAAGTCATGGCCTaGTCGAAGAGCTACATTCAT +
Preference number: 4 (lower is better)
Translates to: HKQLGNKGKFPIQSLRNAKQVMA*SKSYIH
Trigger: ATGAATGTAGCTCTTCGACCAGGCCATGACTTGCTT...AGCATTTCTCAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CCA 90 bp AATGCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGGAGGGACTGTGCAATGCTaGAACAATAATCCAGAATGT +
Preference number: 4 (lower is better)
Translates to: NALLIGQPLKHKQLGNKGGTVQC*NNNPEC
Trigger: ACATTCTGGATTATTGTTCCAGCATTGCACAGTCCC...TCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp AGTCTGGGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTCCTCCTGTCACACTCTaGTTTTCTCCACTTGGAACA +
Preference number: 4 (lower is better)
Translates to: SLGSQNSCLVFWYSVCYTPPVTL*FSPLGT
Trigger: TGTTCCAAGTGGAGAAAATCAGAGTGTGACAGGAGG...AGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACCCAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp TCTAAGTTCACAAATGATCATCACATGAGCCCTCTTCTCCATATACACATTTGTCCTCCTGTCACACTCTaGTTTTCTCCACTTGGAACA +
Preference number: 4 (lower is better)
Translates to: SKFTNDHHMSPLLHIHICPPVTL*FSPLGT
Trigger: TGTTCCAAGTGGAGAAAATCAGAGTGTGACAGGAGG...ACAAATGTGTATATGGAGAAGAGGGCTCATGTGATGATCATTTGTGAACTTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp GGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTCAAATGGCTGCTGTTGCTGTTTaGCTGCCAGAAGCAAGTCAT +
Preference number: 4 (lower is better)
Translates to: GSQNSCLVFWYSVCYTQMAAVAV*LPEASH
Trigger: ATGACTTGCTTCTGGCAGTCAAACAGCAACAGCAGC...CATTTGAGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp CCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGTTGTGCCAGTCATCTTaGTCTTTGCAACTTCAAAGA +
Preference number: 4 (lower is better)
Translates to: PLKHKQLGNKGKFPIQSLLCQSS*SLQLQR
Trigger: TCTTTGAAGTTGCAAAGATCAAGATGACTGGCACAA...CAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp AATGCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGGAGTTCCAGGCATACTTTaGTGTTGCTGTAGTTTGAAA +
Preference number: 4 (lower is better)
Translates to: NALLIGQPLKHKQLGNKGVPGIL*CCCSLK
Trigger: TTTCAAACTACAGCAACATCAAAGTATGCCTGGAAC...TCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp GCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAAGTTCCAGGCATACTTTaGTGTTGCTGTAGTTTGAAA +
Preference number: 4 (lower is better)
Translates to: ALLIGQPLKHKQLGNKGKVPGIL*CCCSLK
Trigger: TTTCAAACTACAGCAACATCAAAGTATGCCTGGAAC...TTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp AGTCTGGGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTCATATCTTTCTCAGATaGAACAGGCAGTGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: SLGSQNSCLVFWYSVCYTHIFLR*NRQWCA
Trigger: GGCACACCACTGCCTGTTTCATCTGAGAAAGATATG...AGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACCCAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp CCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGTTCCCATCCAGTCATTaGGAAATGCTAAAGGCATTT +
Preference number: 4 (lower is better)
Translates to: PLKHKQLGNKGKFPIQSLFPSSH*EMLKAF
Trigger: AAATGCCTTTAGCATTTCTCAATGACTGGATGGGAA...CAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp CCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGAGAAGTAGTGAAAGCTaGAGAACTCCAAATGCATTG +
Preference number: 4 (lower is better)
Translates to: PLKHKQLGNKGKFPIQSLRSSES*RTPNAL
Trigger: CAATGCATTTGGAGTTCTTCAGCTTTCACTACTTCT...CAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp AATGCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGGAAGAAGTAGTGAAAGCTaGAGAACTCCAAATGCATTG +
Preference number: 4 (lower is better)
Translates to: NALLIGQPLKHKQLGNKGRSSES*RTPNAL
Trigger: CAATGCATTTGGAGTTCTTCAGCTTTCACTACTTCT...TCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp GGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTCAAATGTTGACCACCTTAACCTaGACAGGGCGTTCAGTTGTC +
Preference number: 4 (lower is better)
Translates to: GSQNSCLVFWYSVCYTQMLTTLT*TGRSVV
Trigger: GACAACTGAACGCCCTGTGCAGGTTAAGGTGGTCAA...CATTTGAGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp CACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGAGAAATGCTTTCCGCATTCGAGATTaGATATTCACAGCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: HKQLGNKGKFPIQSLRNAFRIRD*IFTAFH
Trigger: ATGGAAGGCTGTGAATATGCAATCTCGAATGCGGAA...AGCATTTCTCAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp GTACAGTATTTTAGTAGTTACATGATTAGCAAGCAACAGAGAAGTAGTGAAAGCGCCCCATCTAGCACCTaGAGCTCTCTGGACAATTTT +
Preference number: 4 (lower is better)
Translates to: VQYFSSYMISKQQRSSESAPSST*SSLDNF
Trigger: AAAATTGTCCAGAGAGCTGCAGGTGCTAGATGGGGC...GCTTTCACTACTTCTCTGTTGCTTGCTAATCATGTAACTACTAAAATACTGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp TCTAAGTTCACAAATGATCATCACATGAGCCCTCTTCTCCATATACACATTTGTGAAGAGCTACATTCATaGACTGCAGAAGGGCATCAG +
Preference number: 4 (lower is better)
Translates to: SKFTNDHHMSPLLHIHICEELHS*TAEGHQ
Trigger: CTGATGCCCTTCTGCAGTGCATGAATGTAGCTCTTC...ACAAATGTGTATATGGAGAAGAGGGCTCATGTGATGATCATTTGTGAACTTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp GTACAGTATTTTAGTAGTTACATGATTAGCAAGCAACAGAGAAGTAGTGAAAGCCTGTTGCTGTTTGACTaGCAGAAGCAAGTCATGGCC +
Preference number: 4 (lower is better)
Translates to: VQYFSSYMISKQQRSSESLLLFD*QKQVMA
Trigger: GGCCATGACTTGCTTCTGGCAGTCAAACAGCAACAG...GCTTTCACTACTTCTCTGTTGCTTGCTAATCATGTAACTACTAAAATACTGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp GTACAGTATTTTAGTAGTTACATGATTAGCAAGCAACAGAGAAGTAGTGAAAGCCTGAATCGCTGCTGTTaGTGTTTGACTGCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: VQYFSSYMISKQQRSSESLNRCC*CLTARS
Trigger: GCTTCTGGCAGTCAAACAGCAACAGCAGCGATTCAG...GCTTTCACTACTTCTCTGTTGCTTGCTAATCATGTAACTACTAAAATACTGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp CACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGAGAAATGCTAAGATGACTGAGATCTaGGATTCCCTGAACTCTGAA +
Preference number: 4 (lower is better)
Translates to: HKQLGNKGKFPIQSLRNAKMTEI*DSLNSE
Trigger: TTCAGAGTTCAGGGAATCGCAGATCTCAGTCATCTT...AGCATTTCTCAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp CACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGAGAAATGCTAGTGGGACTGTGCAATaGTGGAACAATAATCCAGAA +
Preference number: 4 (lower is better)
Translates to: HKQLGNKGKFPIQSLRNASGTVQ*WNNNPE
Trigger: TTCTGGATTATTGTTCCAGCATTGCACAGTCCCACT...AGCATTTCTCAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp CACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGAGAAATGCTGGTTTAGTGGGACTGTaGAATGCTGGAACAATAATC +
Preference number: 4 (lower is better)
Translates to: HKQLGNKGKFPIQSLRNAGLVGL*NAGTII
Trigger: GATTATTGTTCCAGCATTGCACAGTCCCACTAAACC...AGCATTTCTCAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp CACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGAGAAATGCTCTGAAGAACTCCAAATaGATTGCTCATAGGACAACC +
Preference number: 4 (lower is better)
Translates to: HKQLGNKGKFPIQSLRNALKNSK*IAHRTT
Trigger: GGTTGTCCTATGAGCAATGCATTTGGAGTTCTTCAG...AGCATTTCTCAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp CACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGAGAAATGCTTTCCGGAGATATCGCTaGTTCAATTTCCAAATGCAT +
Preference number: 4 (lower is better)
Translates to: HKQLGNKGKFPIQSLRNAFRRYR*FNFQMH
Trigger: ATGCATTTGGAAATTGAATCAGCGATATCTCCGGAA...AGCATTTCTCAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp CCAAATGCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAATTCTTCCAAAAGCTGTaGGCTAACATTGACAAAATC +
Preference number: 4 (lower is better)
Translates to: PNALLIGQPLKHKQLGNKFFQKL*ANIDKI
Trigger: GATTTTGTCAATGTTAGCTCACAGCTTTTGGAAGAA...TTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGCATTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp GGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTCAAATGTTCAGATGCCATGATTaGCTGGATGTTAGCCCCATC +
Preference number: 4 (lower is better)
Translates to: GSQNSCLVFWYSVCYTQMFRCHD*LDVSPI
Trigger: GATGGGGCTAACATCCAGTCAATCATGGCATCTGAA...CATTTGAGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp GGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTCAAATGGAACAAAAACATTGTTaGGGTGACTGGCCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: GSQNSCLVFWYSVCYTQMEQKHC*GDWPVS
Trigger: GGAGACTGGCCAGTCACCTCAACAATGTTTTTGTTC...CATTTGAGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp CACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGAGAAATGCTTTGTGCCAGTCATCTTaGTCTTTGCAACTTCAAAGA +
Preference number: 4 (lower is better)
Translates to: HKQLGNKGKFPIQSLRNALCQSS*SLQLQR
Trigger: TCTTTGAAGTTGCAAAGATCAAGATGACTGGCACAA...AGCATTTCTCAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp GGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTCAAATGAACAGGGAAGATGACTaGGATCTGCGATTCCCTGAA +
Preference number: 4 (lower is better)
Translates to: GSQNSCLVFWYSVCYTQMNREDD*DLRFPE
Trigger: TTCAGGGAATCGCAGATCTCAGTCATCTTCCCTGTT...CATTTGAGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp AATGCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGGATGTCAAAGTTCCTTTTaGCAGTCACCAAAACATTTC +
Preference number: 4 (lower is better)
Translates to: NALLIGQPLKHKQLGNKGCQSSF*QSPKHF
Trigger: GAAATGTTTTGGTGACTGTCAAAAGGAACTTTGACA...TCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp GCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAAGTCCTAAAGAGTAAATaGCATAAGACTGAAGGTGAT +
Preference number: 4 (lower is better)
Translates to: ALLIGQPLKHKQLGNKGKVLKSK*HKTEGD
Trigger: ATCACCTTCAGTCTTATGTCATTTACTCTTTAGGAC...TTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp CCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGGTCCTAAAGAGTAAATaGCATAAGACTGAAGGTGAT +
Preference number: 4 (lower is better)
Translates to: PLKHKQLGNKGKFPIQSLVLKSK*HKTEGD
Trigger: ATCACCTTCAGTCTTATGTCATTTACTCTTTAGGAC...CAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp AATGCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGGAGTCCTAAAGAGTAAATaGCATAAGACTGAAGGTGAT +
Preference number: 4 (lower is better)
Translates to: NALLIGQPLKHKQLGNKGVLKSK*HKTEGD
Trigger: ATCACCTTCAGTCTTATGTCATTTACTCTTTAGGAC...TCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp GTACAGTATTTTAGTAGTTACATGATTAGCAAGCAACAGAGAAGTAGTGAAAGCGAGTGCCACACCACCTaGAGTAAGTTCTCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: VQYFSSYMISKQQRSSESECHTT*SKFSSS
Trigger: TGAAGAAGAGAACTTACTTCAGGTGGTGTGGCACTC...GCTTTCACTACTTCTCTGTTGCTTGCTAATCATGTAACTACTAAAATACTGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp TCTAAGTTCACAAATGATCATCACATGAGCCCTCTTCTCCATATACACATTTGTTGCAGACATTCACAATaGTCAGCAGGCGTTCATCAT +
Preference number: 4 (lower is better)
Translates to: SKFTNDHHMSPLLHIHICCRHSQ*SAGVHH
Trigger: ATGATGAACGCCTGCTGAGCATTGTGAATGTCTGCA...ACAAATGTGTATATGGAGAAGAGGGCTCATGTGATGATCATTTGTGAACTTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp TCTAAGTTCACAAATGATCATCACATGAGCCCTCTTCTCCATATACACATTTGTATCTCGAAGGGCCCATaGAATCTGCCTTTTGTAGAA +
Preference number: 4 (lower is better)
Translates to: SKFTNDHHMSPLLHIHICISKGP*NLPFVE
Trigger: TTCTACAAAAGGCAGATTGCATGGGCCCTTCGAGAT...ACAAATGTGTATATGGAGAAGAGGGCTCATGTGATGATCATTTGTGAACTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp GTACAGTATTTTAGTAGTTACATGATTAGCAAGCAACAGAGAAGTAGTGAAAGCGAAGAGCTACATTCATaGACTGCAGAAGGGCATCAG +
Preference number: 4 (lower is better)
Translates to: VQYFSSYMISKQQRSSESEELHS*TAEGHQ
Trigger: CTGATGCCCTTCTGCAGTGCATGAATGTAGCTCTTC...GCTTTCACTACTTCTCTGTTGCTTGCTAATCATGTAACTACTAAAATACTGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp CCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGCTTCTGGCTTTCATTTaGTACTTTCTCCACATTAAC +
Preference number: 4 (lower is better)
Translates to: PLKHKQLGNKGKFPIQSLLLAFI*YFLHIN
Trigger: GTTAATGTGGAGAAAGTAGCAAATGAAAGCCAGAAG...CAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp AATGCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGGACTTCTGGCTTTCATTTaGTACTTTCTCCACATTAAC +
Preference number: 4 (lower is better)
Translates to: NALLIGQPLKHKQLGNKGLLAFI*YFLHIN
Trigger: GTTAATGTGGAGAAAGTAGCAAATGAAAGCCAGAAG...TCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CCA 90 bp AATGCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGGACAGGCGTTCATCATTTaGTGTAAAAATGTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: NALLIGQPLKHKQLGNKGQAFII*CKNVSL
Trigger: CAAAGAGACATTTTTACACCAAATGATGAACGCCTG...TCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CCA 90 bp GGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTCAAATGGATGCCATGATTGACTaGATGTTAGCCCCATCTAGC +
Preference number: 4 (lower is better)
Translates to: GSQNSCLVFWYSVCYTQMDAMID*MLAPSS
Trigger: GCTAGATGGGGCTAACATCCAGTCAATCATGGCATC...CATTTGAGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CCA 90 bp AGTCTGGGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTAAGCAAGTCATGGCCTaGTCGAAGAGCTACATTCAT +
Preference number: 4 (lower is better)
Translates to: SLGSQNSCLVFWYSVCYTKQVMA*SKSYIH
Trigger: ATGAATGTAGCTCTTCGACCAGGCCATGACTTGCTT...AGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACCCAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CCA 90 bp GGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTCAAATGTCCCTGGGGGTCTTCTaGCTTTCATTTGCTACTTTC +
Preference number: 4 (lower is better)
Translates to: GSQNSCLVFWYSVCYTQMSLGVF*LSFATF
Trigger: GAAAGTAGCAAATGAAAGCCAGAAGACCCCCAGGGA...CATTTGAGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp CACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGAGAAATGCTTTTGTAATGCATGCTTaGTTGCTGTCATCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: HKQLGNKGKFPIQSLRNAFVMHA*LLSSFL
Trigger: GAGAAAAGATGACAGCAATCAAGCATGCATTACAAA...AGCATTTCTCAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp TCTAAGTTCACAAATGATCATCACATGAGCCCTCTTCTCCATATACACATTTGTGACGCTCAGCATTTTTaGAGATTGATTCTGCAAGTC +
Preference number: 4 (lower is better)
Translates to: SKFTNDHHMSPLLHIHICDAQHF*RLILQV
Trigger: GACTTGCAGAATCAATCTTCAAAAATGCTGAGCGTC...ACAAATGTGTATATGGAGAAGAGGGCTCATGTGATGATCATTTGTGAACTTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp AGTCTGGGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTCAAATGATCATCACATaGGCCCTCTTCTCCATATAC +
Preference number: 4 (lower is better)
Translates to: SLGSQNSCLVFWYSVCYTQMIIT*ALFSIY
Trigger: GTATATGGAGAAGAGGGCTCATGTGATGATCATTTG...AGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACCCAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp TCTAAGTTCACAAATGATCATCACATGAGCCCTCTTCTCCATATACACATTTGTCAAATGATCATCACATaGGCCCTCTTCTCCATATAC +
Preference number: 4 (lower is better)
Translates to: SKFTNDHHMSPLLHIHICQMIIT*ALFSIY
Trigger: GTATATGGAGAAGAGGGCTCATGTGATGATCATTTG...ACAAATGTGTATATGGAGAAGAGGGCTCATGTGATGATCATTTGTGAACTTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp AGTCTGGGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTTCTCTGTTTCCTGTTTaGCAGCACTTTCTTTTCGAG +
Preference number: 4 (lower is better)
Translates to: SLGSQNSCLVFWYSVCYTSLFPV*QHFLFE
Trigger: CTCGAAAAGAAAGTGCTGTCAAACAGGAAACAGAGA...AGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACCCAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000346134.11
ENST00000381295.7
CDS-3UTR TCA 90 bp TCTAAGTTCACAAATGATCATCACATGAGCCCTCTTCTCCATATACACATTTGTTCTCTGTTTCCTGTTTaGCAGCACTTTCTTTTCGAG +
Preference number: 4 (lower is better)
Translates to: SKFTNDHHMSPLLHIHICSLFPV*QHFLFE
Trigger: CTCGAAAAGAAAGTGCTGTCAAACAGGAAACAGAGA...ACAAATGTGTATATGGAGAAGAGGGCTCATGTGATGATCATTTGTGAACTTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346134.11
ENST00000381295.7
CDS-3UTR GCA 90 bp CCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGTCTCTTTGTAATGCATaGTTGATTGCTGTCATCTTT +
Preference number: 4 (lower is better)
Translates to: PLKHKQLGNKGKFPIQSLSLCNA*LIAVIF
Trigger: AAAGATGACAGCAATCAAGCATGCATTACAAAGAGA...CAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp GTACAGTATTTTAGTAGTTACATGATTAGCAAGCAACAGAGAAGTAGTGAAAGCATCTCGAAGGGCCCATaGAATCTGCCTTTTGTAGAA +
Preference number: 4 (lower is better)
Translates to: VQYFSSYMISKQQRSSESISKGP*NLPFVE
Trigger: TTCTACAAAAGGCAGATTGCATGGGCCCTTCGAGAT...GCTTTCACTACTTCTCTGTTGCTTGCTAATCATGTAACTACTAAAATACTGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp TCTAAGTTCACAAATGATCATCACATGAGCCCTCTTCTCCATATACACATTTGTCATTCTTTTCAGCAGTaGTGCTGGCAACCCATTTAT +
Preference number: 4 (lower is better)
Translates to: SKFTNDHHMSPLLHIHICHSFQQ*CWQPIY
Trigger: ATAAATGGGTTGCCAGCAGCACTGCTGAAAAGAATG...ACAAATGTGTATATGGAGAAGAGGGCTCATGTGATGATCATTTGTGAACTTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp TCTAAGTTCACAAATGATCATCACATGAGCCCTCTTCTCCATATACACATTTGTTCTGGACAATTTTTCTaGAAAGGCTTCCGCATTCGA +
Preference number: 4 (lower is better)
Translates to: SKFTNDHHMSPLLHIHICSGQFF*KGFRIR
Trigger: TCGAATGCGGAAGCCTTTGCAGAAAAATTGTCCAGA...ACAAATGTGTATATGGAGAAGAGGGCTCATGTGATGATCATTTGTGAACTTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp AATGCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGGAGCATTTCCTCATAACTaGTCAGTTTCAATTCAATCT +
Preference number: 4 (lower is better)
Translates to: NALLIGQPLKHKQLGNKGAFPHN*SVSIQS
Trigger: AGATTGAATTGAAACTGAGCAGTTATGAGGAAATGC...TCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp AGTCTGGGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTAAGATGACTGAGATCTaGGATTCCCTGAACTCTGAA +
Preference number: 4 (lower is better)
Translates to: SLGSQNSCLVFWYSVCYTKMTEI*DSLNSE
Trigger: TTCAGAGTTCAGGGAATCGCAGATCTCAGTCATCTT...AGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACCCAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp GGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTCAAATGCGTATAAATTCATCTTaGATGGAGTGCCACACCACC +
Preference number: 4 (lower is better)
Translates to: GSQNSCLVFWYSVCYTQMRINSS*MECHTT
Trigger: GGTGGTGTGGCACTCCATGCAAGATGAATTTATACG...CATTTGAGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp AGTCTGGGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTGGTTTAGTGGGACTGTaGAATGCTGGAACAATAATC +
Preference number: 4 (lower is better)
Translates to: SLGSQNSCLVFWYSVCYTGLVGL*NAGTII
Trigger: GATTATTGTTCCAGCATTGCACAGTCCCACTAAACC...AGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACCCAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CCA 90 bp AGTCTGGGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTCCTTTATATGACCTTTaGCCAAGTCCATGTGGTTCA +
Preference number: 4 (lower is better)
Translates to: SLGSQNSCLVFWYSVCYTPLYDL*PSPCGS
Trigger: TGAACCACATGGACTTGGCCAAAGGTCATATAAAGG...AGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACCCAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CCA 90 bp GTACAGTATTTTAGTAGTTACATGATTAGCAAGCAACAGAGAAGTAGTGAAAGCAAGCAAGTCATGGCCTaGTCGAAGAGCTACATTCAT +
Preference number: 4 (lower is better)
Translates to: VQYFSSYMISKQQRSSESKQVMA*SKSYIH
Trigger: ATGAATGTAGCTCTTCGACCAGGCCATGACTTGCTT...GCTTTCACTACTTCTCTGTTGCTTGCTAATCATGTAACTACTAAAATACTGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CCA 90 bp CCAAATGCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAATCAAAGTGCTTATACTaGCGTATAAATTCATCTTGC +
Preference number: 4 (lower is better)
Translates to: PNALLIGQPLKHKQLGNKSKCLY*RINSSC
Trigger: GCAAGATGAATTTATACGCCAGTATAAGCACTTTGA...TTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGCATTTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CCA 90 bp AATGCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGGATCAAAGTGCTTATACTaGCGTATAAATTCATCTTGC +
Preference number: 4 (lower is better)
Translates to: NALLIGQPLKHKQLGNKGSKCLY*RINSSC
Trigger: GCAAGATGAATTTATACGCCAGTATAAGCACTTTGA...TCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CCA 90 bp AGTCTGGGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTGGGACTGTGCAATGCTaGAACAATAATCCAGAATGT +
Preference number: 4 (lower is better)
Translates to: SLGSQNSCLVFWYSVCYTGTVQC*NNNPEC
Trigger: ACATTCTGGATTATTGTTCCAGCATTGCACAGTCCC...AGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACCCAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp GGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTCAAATGGACGCTCAGCATTTTTaGAGATTGATTCTGCAAGTC +
Preference number: 4 (lower is better)
Translates to: GSQNSCLVFWYSVCYTQMDAQHF*RLILQV
Trigger: GACTTGCAGAATCAATCTTCAAAAATGCTGAGCGTC...CATTTGAGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp GTACAGTATTTTAGTAGTTACATGATTAGCAAGCAACAGAGAAGTAGTGAAAGCGACGCTCAGCATTTTTaGAGATTGATTCTGCAAGTC +
Preference number: 4 (lower is better)
Translates to: VQYFSSYMISKQQRSSESDAQHF*RLILQV
Trigger: GACTTGCAGAATCAATCTTCAAAAATGCTGAGCGTC...GCTTTCACTACTTCTCTGTTGCTTGCTAATCATGTAACTACTAAAATACTGTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp AGTCTGGGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTTTCCCATCCAGTCATTaGGAAATGCTAAAGGCATTT +
Preference number: 4 (lower is better)
Translates to: SLGSQNSCLVFWYSVCYTFPSSH*EMLKAF
Trigger: AAATGCCTTTAGCATTTCTCAATGACTGGATGGGAA...AGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACCCAGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp GTACAGTATTTTAGTAGTTACATGATTAGCAAGCAACAGAGAAGTAGTGAAAGCCAAATGATCATCACATaGGCCCTCTTCTCCATATAC +
Preference number: 4 (lower is better)
Translates to: VQYFSSYMISKQQRSSESQMIIT*ALFSIY
Trigger: GTATATGGAGAAGAGGGCTCATGTGATGATCATTTG...GCTTTCACTACTTCTCTGTTGCTTGCTAATCATGTAACTACTAAAATACTGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp CACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGAGAAATGCTTCTCTTTGTAATGCATaGTTGATTGCTGTCATCTTT +
Preference number: 4 (lower is better)
Translates to: HKQLGNKGKFPIQSLRNASLCNA*LIAVIF
Trigger: AAAGATGACAGCAATCAAGCATGCATTACAAAGAGA...AGCATTTCTCAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp AGTCTGGGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTGATGAATTAGGTGGTTaGTTTCAGAGATCTGATCCA +
Preference number: 4 (lower is better)
Translates to: SLGSQNSCLVFWYSVCYTDELGG*FQRSDP
Trigger: TGGATCAGATCTCTGAAAGCAACCACCTAATTCATC...AGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACCCAGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp GGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTCAAATGGATAAGTTTGGTGTATaGTTTATCCAGGTCTCCACG +
Preference number: 4 (lower is better)
Translates to: GSQNSCLVFWYSVCYTQMDKFGV*FIQVST
Trigger: CGTGGAGACCTGGATAAAGCATACACCAAACTTATC...CATTTGAGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp GGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTCAAATGGGTTTAGTGGGACTGTaGAATGCTGGAACAATAATC +
Preference number: 4 (lower is better)
Translates to: GSQNSCLVFWYSVCYTQMGLVGL*NAGTII
Trigger: GATTATTGTTCCAGCATTGCACAGTCCCACTAAACC...CATTTGAGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp CACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGAGAAATGCTGGTTCTCAAAACAGTTaGTTGGTATTTTGGTATAGT +
Preference number: 4 (lower is better)
Translates to: HKQLGNKGKFPIQSLRNAGSQNS*LVFWYS
Trigger: ACTATACCAAAATACCAAGCAACTGTTTTGAGAACC...AGCATTTCTCAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CCA 90 bp GGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTCAAATGGGGACTGTGCAATGCTaGAACAATAATCCAGAATGT +
Preference number: 4 (lower is better)
Translates to: GSQNSCLVFWYSVCYTQMGTVQC*NNNPEC
Trigger: ACATTCTGGATTATTGTTCCAGCATTGCACAGTCCC...CATTTGAGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp TCTAAGTTCACAAATGATCATCACATGAGCCCTCTTCTCCATATACACATTTGTTTTGTAATGCATGCTTaGTTGCTGTCATCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: SKFTNDHHMSPLLHIHICFVMHA*LLSSFL
Trigger: GAGAAAAGATGACAGCAATCAAGCATGCATTACAAA...ACAAATGTGTATATGGAGAAGAGGGCTCATGTGATGATCATTTGTGAACTTAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp GTACAGTATTTTAGTAGTTACATGATTAGCAAGCAACAGAGAAGTAGTGAAAGCTTCCGGAGATATCGCTaGTTCAATTTCCAAATGCAT +
Preference number: 4 (lower is better)
Translates to: VQYFSSYMISKQQRSSESFRRYR*FNFQMH
Trigger: ATGCATTTGGAAATTGAATCAGCGATATCTCCGGAA...GCTTTCACTACTTCTCTGTTGCTTGCTAATCATGTAACTACTAAAATACTGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp GGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTCAAATGGTTCCAGGCATACTTTaGTGTTGCTGTAGTTTGAAA +
Preference number: 4 (lower is better)
Translates to: GSQNSCLVFWYSVCYTQMVPGIL*CCCSLK
Trigger: TTTCAAACTACAGCAACATCAAAGTATGCCTGGAAC...CATTTGAGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp TCTAAGTTCACAAATGATCATCACATGAGCCCTCTTCTCCATATACACATTTGTTGTCAAAGTTCCTTTTaGCAGTCACCAAAACATTTC +
Preference number: 4 (lower is better)
Translates to: SKFTNDHHMSPLLHIHICCQSSF*QSPKHF
Trigger: GAAATGTTTTGGTGACTGTCAAAAGGAACTTTGACA...ACAAATGTGTATATGGAGAAGAGGGCTCATGTGATGATCATTTGTGAACTTAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp GGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTCAAATGTTCCCATCCAGTCATTaGGAAATGCTAAAGGCATTT +
Preference number: 4 (lower is better)
Translates to: GSQNSCLVFWYSVCYTQMFPSSH*EMLKAF
Trigger: AAATGCCTTTAGCATTTCTCAATGACTGGATGGGAA...CATTTGAGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp GGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTCAAATGGATGAATTAGGTGGTTaGTTTCAGAGATCTGATCCA +
Preference number: 4 (lower is better)
Translates to: GSQNSCLVFWYSVCYTQMDELGG*FQRSDP
Trigger: TGGATCAGATCTCTGAAAGCAACCACCTAATTCATC...CATTTGAGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp GTACAGTATTTTAGTAGTTACATGATTAGCAAGCAACAGAGAAGTAGTGAAAGCGATGAATTAGGTGGTTaGTTTCAGAGATCTGATCCA +
Preference number: 4 (lower is better)
Translates to: VQYFSSYMISKQQRSSESDELGG*FQRSDP
Trigger: TGGATCAGATCTCTGAAAGCAACCACCTAATTCATC...GCTTTCACTACTTCTCTGTTGCTTGCTAATCATGTAACTACTAAAATACTGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CCA 90 bp TCTAAGTTCACAAATGATCATCACATGAGCCCTCTTCTCCATATACACATTTGTAGATCTTATCAAATTTaGTCCTGTCAGCAACATCGA +
Preference number: 4 (lower is better)
Translates to: SKFTNDHHMSPLLHIHICRSYQI*SCQQHR
Trigger: TCGATGTTGCTGACAGGACCAAATTTGATAAGATCT...ACAAATGTGTATATGGAGAAGAGGGCTCATGTGATGATCATTTGTGAACTTAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp GTACAGTATTTTAGTAGTTACATGATTAGCAAGCAACAGAGAAGTAGTGAAAGCTTTGTAATGCATGCTTaGTTGCTGTCATCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: VQYFSSYMISKQQRSSESFVMHA*LLSSFL
Trigger: GAGAAAAGATGACAGCAATCAAGCATGCATTACAAA...GCTTTCACTACTTCTCTGTTGCTTGCTAATCATGTAACTACTAAAATACTGTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp GGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTCAAATGTTCTTCCAAAAGCTGTaGGCTAACATTGACAAAATC +
Preference number: 4 (lower is better)
Translates to: GSQNSCLVFWYSVCYTQMFFQKL*ANIDKI
Trigger: GATTTTGTCAATGTTAGCTCACAGCTTTTGGAAGAA...CATTTGAGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR TCA 90 bp GTACAGTATTTTAGTAGTTACATGATTAGCAAGCAACAGAGAAGTAGTGAAAGCTGTCAAAGTTCCTTTTaGCAGTCACCAAAACATTTC +
Preference number: 4 (lower is better)
Translates to: VQYFSSYMISKQQRSSESCQSSF*QSPKHF
Trigger: GAAATGTTTTGGTGACTGTCAAAAGGAACTTTGACA...GCTTTCACTACTTCTCTGTTGCTTGCTAATCATGTAACTACTAAAATACTGTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp AGTCTGGGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTTCTCTTTGTAATGCATaGTTGATTGCTGTCATCTTT +
Preference number: 4 (lower is better)
Translates to: SLGSQNSCLVFWYSVCYTSLCNA*LIAVIF
Trigger: AAAGATGACAGCAATCAAGCATGCATTACAAAGAGA...AGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACCCAGACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp TCTAAGTTCACAAATGATCATCACATGAGCCCTCTTCTCCATATACACATTTGTGCATTTCCTCATAACTaGTCAGTTTCAATTCAATCT +
Preference number: 4 (lower is better)
Translates to: SKFTNDHHMSPLLHIHICAFPHN*SVSIQS
Trigger: AGATTGAATTGAAACTGAGCAGTTATGAGGAAATGC...ACAAATGTGTATATGGAGAAGAGGGCTCATGTGATGATCATTTGTGAACTTAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp AGTCTGGGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTGGTTCTCAAAACAGTTaGTTGGTATTTTGGTATAGT +
Preference number: 4 (lower is better)
Translates to: SLGSQNSCLVFWYSVCYTGSQNS*LVFWYS
Trigger: ACTATACCAAAATACCAAGCAACTGTTTTGAGAACC...AGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACCCAGACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CCA 90 bp GGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTCAAATGCAGGCGTTCATCATTTaGTGTAAAAATGTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: GSQNSCLVFWYSVCYTQMQAFII*CKNVSL
Trigger: CAAAGAGACATTTTTACACCAAATGATGAACGCCTG...CATTTGAGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CCA 90 bp GTACAGTATTTTAGTAGTTACATGATTAGCAAGCAACAGAGAAGTAGTGAAAGCCAGGCGTTCATCATTTaGTGTAAAAATGTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: VQYFSSYMISKQQRSSESQAFII*CKNVSL
Trigger: CAAAGAGACATTTTTACACCAAATGATGAACGCCTG...GCTTTCACTACTTCTCTGTTGCTTGCTAATCATGTAACTACTAAAATACTGTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CCA 90 bp GTACAGTATTTTAGTAGTTACATGATTAGCAAGCAACAGAGAAGTAGTGAAAGCAGATCTTATCAAATTTaGTCCTGTCAGCAACATCGA +
Preference number: 4 (lower is better)
Translates to: VQYFSSYMISKQQRSSESRSYQI*SCQQHR
Trigger: TCGATGTTGCTGACAGGACCAAATTTGATAAGATCT...GCTTTCACTACTTCTCTGTTGCTTGCTAATCATGTAACTACTAAAATACTGTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CCA 90 bp GGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTCAAATGAGATCTTATCAAATTTaGTCCTGTCAGCAACATCGA +
Preference number: 4 (lower is better)
Translates to: GSQNSCLVFWYSVCYTQMRSYQI*SCQQHR
Trigger: TCGATGTTGCTGACAGGACCAAATTTGATAAGATCT...CATTTGAGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp GTACAGTATTTTAGTAGTTACATGATTAGCAAGCAACAGAGAAGTAGTGAAAGCGCATTTCCTCATAACTaGTCAGTTTCAATTCAATCT +
Preference number: 4 (lower is better)
Translates to: VQYFSSYMISKQQRSSESAFPHN*SVSIQS
Trigger: AGATTGAATTGAAACTGAGCAGTTATGAGGAAATGC...GCTTTCACTACTTCTCTGTTGCTTGCTAATCATGTAACTACTAAAATACTGTAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR GCA 90 bp GTACAGTATTTTAGTAGTTACATGATTAGCAAGCAACAGAGAAGTAGTGAAAGCGGTTCTCAAAACAGTTaGTTGGTATTTTGGTATAGT +
Preference number: 4 (lower is better)
Translates to: VQYFSSYMISKQQRSSESGSQNS*LVFWYS
Trigger: ACTATACCAAAATACCAAGCAACTGTTTTGAGAACC...GCTTTCACTACTTCTCTGTTGCTTGCTAATCATGTAACTACTAAAATACTGTAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS GCA 90 bp GGCGTGGAGACAGCAGCCGGACTGAGGAGCCGCCTTAGACCCTGGTaGCTGTCAGCTCGTCTGTCCGCCGCCGCCGGGACTACCGGGCAG +
Preference number: 5 (lower is better)
Translates to: GVETAAGLRSRLRPW*LSARLSAAAGTTGQ
Trigger: CTGCCCGGTAGTCCCGGCGGCGGCGGACAGACGAGCTGACAGGCACCAGGGTCTAAGGCGGCTCCTCAGTCCGGCTGCTGTCTCCACGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381295.7
CDS CCA 90 bp CCAGGCGTGGAGACAGCAGCCGGACTGAGGAGCCGCCTTAGACCCTaGTGCCTGTCAGCTCGTCTGTCCGCCGCCGCCGGGACTACCGGG +
Preference number: 5 (lower is better)
Translates to: PGVETAAGLRSRLRP*CLSARLSAAAGTTG
Trigger: CCCGGTAGTCCCGGCGGCGGCGGACAGACGAGCTGACAGGCACCAGGGTCTAAGGCGGCTCCTCAGTCCGGCTGCTGTCTCCACGCCTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381295.7
CDS TCA 90 bp GGACTACCGGGCAGCCGCGGCCGAAGGCTTACCGCAAGGCCGGACTaGGCCTGGCTGTGCCGAGGCGGGTCTTCCAAAACGGAGACCGGA +
Preference number: 5 (lower is better)
Translates to: GLPGSRGRRLTARPD*AWLCRGGSSKTETG
Trigger: TCCGGTCTCCGTTTTGGAAGACCCGCCTCGGCACAGCCAGGCTCAGTCCGGCCTTGCGGTAAGCCTTCGGCCGCGGCTGCCCGGTAGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381295.7
CDS GCA 90 bp GCCAGAAGCAAGTCATGGCCTGGTCGAAGAGCTACATTCATGCACTaGAGAAGGGCATCAGCAGCATTGGTGCAGGCCTCAATGCCTCTG +
Preference number: 5 (lower is better)
Translates to: ARSKSWPGRRATFMH*RRASAALVQASMPL
Trigger: CAGAGGCATTGAGGCCTGCACCAATGCTGCTGATGCCCTTCTGCAGTGCATGAATGTAGCTCTTCGACCAGGCCATGACTTGCTTCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS GCA 90 bp CTGGCCAGTCTCCGGGCAAAAAGCTCTCGCAAATCACTGAATCGCTaGTGTTGCTGTTTGACTGCCAGAAGCAAGTCATGGCCTGGTCGA +
Preference number: 5 (lower is better)
Translates to: LASLRAKSSRKSLNR*CCCLTARSKSWPGR
Trigger: TCGACCAGGCCATGACTTGCTTCTGGCAGTCAAACAGCAACAGCAGCGATTCAGTGATTTGCGAGAGCTTTTTGCCCGGAGACTGGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS GCA 90 bp AGTCTCCGGGCAAAAAGCTCTCGCAAATCACTGAATCGCTGCTGTTaGTGTTTGACTGCCAGAAGCAAGTCATGGCCTGGTCGAAGAGCT +
Preference number: 5 (lower is better)
Translates to: SLRAKSSRKSLNRCC*CLTARSKSWPGRRA
Trigger: AGCTCTTCGACCAGGCCATGACTTGCTTCTGGCAGTCAAACAGCAACAGCAGCGATTCAGTGATTTGCGAGAGCTTTTTGCCCGGAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS CCA 90 bp GTCGAAGAGCTACATTCATGCACTGCAGAAGGGCATCAGCAGCATTaGTGCAGGCCTCAATGCCTCTGGAAGAAGCAAGATCTCCTTCCT +
Preference number: 5 (lower is better)
Translates to: VEELHSCTAEGHQQH*CRPQCLWKKQDLLP
Trigger: AGGAAGGAGATCTTGCTTCTTCCAGAGGCATTGAGGCCTGCACCAATGCTGCTGATGCCCTTCTGCAGTGCATGAATGTAGCTCTTCGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS GCA 90 bp GAAGAGCTACATTCATGCACTGCAGAAGGGCATCAGCAGCATTGGTaGAGGCCTCAATGCCTCTGGAAGAAGCAAGATCTCCTTCCTGAA +
Preference number: 5 (lower is better)
Translates to: EELHSCTAEGHQQHW*RPQCLWKKQDLLPE
Trigger: TTCAGGAAGGAGATCTTGCTTCTTCCAGAGGCATTGAGGCCTGCACCAATGCTGCTGATGCCCTTCTGCAGTGCATGAATGTAGCTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS CCA 90 bp ACTGCAGAAGGGCATCAGCAGCATTGGTGCAGGCCTCAATGCCTCTaGAAGAAGCAAGATCTCCTTCCTGAAGGGCCTTTATATGACCTT +
Preference number: 5 (lower is better)
Translates to: TAEGHQQHWCRPQCL*KKQDLLPEGPLYDL
Trigger: AAGGTCATATAAAGGCCCTTCAGGAAGGAGATCTTGCTTCTTCCAGAGGCATTGAGGCCTGCACCAATGCTGCTGATGCCCTTCTGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS GCA 90 bp ATATCTTTCTCAGATGAAACAGGCAGTGGTGTGCCACAATTATGTTaGCGTGATAATGTTCCTCCATCCAGGTCCTCTGCTTCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: ISFSDETGSGVPQLC*RDNVPPSRSSASAC
Trigger: GCAGGCTGAAGCAGAGGACCTGGATGGAGGAACATTATCACGGCAACATAATTGTGGCACACCACTGCCTGTTTCATCTGAGAAAGATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504321.1
CDS-3UTR CAA 90 bp CACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGAGAAATGCTCCCCTCAATAAAGCGTaGAACGGGAAGCGGCCGTTC +
Preference number: 5 (lower is better)
Translates to: HKQLGNKGKFPIQSLRNAPLNKA*NGKRPF
Trigger: GAACGGCCGCTTCCCGTTCAACGCTTTATTGAGGGG...AGCATTTCTCAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346134.11
ENST00000381295.7
CDS-3UTR CAA 90 bp GCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAACGCTGCTGTTGCTGTTaGACTGCCAGAAGCAAGTCA +
Preference number: 5 (lower is better)
Translates to: ALLIGQPLKHKQLGNKGKRCCCC*TARSKS
Trigger: TGACTTGCTTCTGGCAGTCAAACAGCAACAGCAGCG...TTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS GCA 90 bp AGCAGGCGTTCATCATTTGGTGTAAAAATGTCTCTTTGTAATGCATaGTTGATTGCTGTCATCTTTTCTCAGCGCAAGGCCGGACTGAGC +
Preference number: 5 (lower is better)
Translates to: SRRSSFGVKMSLCNA*LIAVIFSQRKAGLS
Trigger: GCTCAGTCCGGCCTTGCGCTGAGAAAAGATGACAGCAATCAAGCATGCATTACAAAGAGACATTTTTACACCAAATGATGAACGCCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346134.11
ENST00000349598.6
CDS GCA 90 bp GATAGCATCTTTGGCATCTACCACAGCAAGATCTCGAAGGGCCCATaGAATCTGCCTTTTGTAGAAATCTCCCTTATCGGATTTCTTGAC +
Preference number: 5 (lower is better)
Translates to: DSIFGIYHSKISKGP*NLPFVEISLIGFLD
Trigger: GTCAAGAAATCCGATAAGGGAGATTTCTACAAAAGGCAGATTGCATGGGCCCTTCGAGATCTTGCTGTGGTAGATGCCAAAGATGCTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
ENST00000505501.1
CDS GCA 90 bp ATATCTTTCTCAGATGAAACAGGCAGTGGTGTGCCACAATTATGTTaGCGTGATAATGTTCCTCCATCCAGGTCCTCTGCTTCAGCCATA +
Preference number: 5 (lower is better)
Translates to: ISFSDETGSGVPQLC*RDNVPPSRSSASAI
Trigger: TATGGCTGAAGCAGAGGACCTGGATGGAGGAACATTATCACGGCAACATAATTGTGGCACACCACTGCCTGTTTCATCTGAGAAAGATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
ENST00000509302.5
ENST00000511971.5
CDS-3UTR CAA 90 bp CCAAATGCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGCACAGGGCGTTCAGTaGTCACTGTGGCACATAAAA +
Preference number: 5 (lower is better)
Translates to: PNALLIGQPLKHKQLGNKAQGVQ*SLWHIK
Trigger: TTTTATGTGCCACAGTGACAACTGAACGCCCTGTGC...TTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGCATTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CAA 90 bp CCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGGCACAGGGCGTTCAGTaGTCACTGTGGCACATAAAA +
Preference number: 5 (lower is better)
Translates to: PLKHKQLGNKGKFPIQSLAQGVQ*SLWHIK
Trigger: TTTTATGTGCCACAGTGACAACTGAACGCCCTGTGC...CAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CAA 90 bp AGTCTGGGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTAGGGCATCAGCAGCATaGGTGCAGGCCTCAATGCCT +
Preference number: 5 (lower is better)
Translates to: SLGSQNSCLVFWYSVCYTRASAA*VQASMP
Trigger: AGGCATTGAGGCCTGCACCAATGCTGCTGATGCCCT...AGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACCCAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CAA 90 bp CACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGAGAAATGCTCGCTGCTGTTGCTGTTaGACTGCCAGAAGCAAGTCA +
Preference number: 5 (lower is better)
Translates to: HKQLGNKGKFPIQSLRNARCCCC*TARSKS
Trigger: TGACTTGCTTCTGGCAGTCAAACAGCAACAGCAGCG...AGCATTTCTCAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CAA 90 bp GCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAAACTGAATCGCTGCTGTaGCTGTTTGACTGCCAGAAG +
Preference number: 5 (lower is better)
Translates to: ALLIGQPLKHKQLGNKGKTESLL*LFDCQK
Trigger: CTTCTGGCAGTCAAACAGCAACAGCAGCGATTCAGT...TTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CAA 90 bp AATGCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGGAACTGAATCGCTGCTGTaGCTGTTTGACTGCCAGAAG +
Preference number: 5 (lower is better)
Translates to: NALLIGQPLKHKQLGNKGTESLL*LFDCQK
Trigger: CTTCTGGCAGTCAAACAGCAACAGCAGCGATTCAGT...TCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CAA 90 bp CCAAATGCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAACAGTTCAACAGAGTGTaGGGCAAGAGTCGAACTCTG +
Preference number: 5 (lower is better)
Translates to: PNALLIGQPLKHKQLGNKQFNRV*GKSRTL
Trigger: CAGAGTTCGACTCTTGCCCAACACTCTGTTGAACTG...TTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGCATTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CAA 90 bp CCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGAGCCACTCCATCAGCTaGGCATATCGGAGCAAATCT +
Preference number: 5 (lower is better)
Translates to: PLKHKQLGNKGKFPIQSLSHSIS*AYRSKS
Trigger: AGATTTGCTCCGATATGCCAAGCTGATGGAGTGGCT...CAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CAA 90 bp CCAAATGCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAAGCCACTCCATCAGCTaGGCATATCGGAGCAAATCT +
Preference number: 5 (lower is better)
Translates to: PNALLIGQPLKHKQLGNKSHSIS*AYRSKS
Trigger: AGATTTGCTCCGATATGCCAAGCTGATGGAGTGGCT...TTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGCATTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CAA 90 bp AATGCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGGAAGCAGGGTCCACATTTaGTGCAGTCCACACATGATG +
Preference number: 5 (lower is better)
Translates to: NALLIGQPLKHKQLGNKGSRVHI*CSPHMM
Trigger: CATCATGTGTGGACTGCACAAAATGTGGACCCTGCT...TCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CAA 90 bp TCTAAGTTCACAAATGATCATCACATGAGCCCTCTTCTCCATATACACATTTGTCCCCTCAATAAAGCGTaGAACGGGAAGCGGCCGTTC +
Preference number: 5 (lower is better)
Translates to: SKFTNDHHMSPLLHIHICPLNKA*NGKRPF
Trigger: GAACGGCCGCTTCCCGTTCAACGCTTTATTGAGGGG...ACAAATGTGTATATGGAGAAGAGGGCTCATGTGATGATCATTTGTGAACTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346134.11
ENST00000381295.7
CDS GCA 90 bp GTTAAATGCAAGTTGGTAACTTACTTCCTCCTCCCTTATGCCCTGTaGCACGCGAGCTTCAACACCTTCAAAGAAATGCTTCAAGGAAAT +
Preference number: 5 (lower is better)
Translates to: VKCKLVTYFLLPYAL*HASFNTFKEMLQGN
Trigger: ATTTCCTTGAAGCATTTCTTTGAAGGTGTTGAAGCTCGCGTGGCACAGGGCATAAGGGAGGAGGAAGTAAGTTACCAACTTGCATTTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506936.1
CDS GCA 90 bp TCACTTATTCATAGAATTCAGGAAAGTCTTACCCCATCTAGCACCTaGAGCTCTCTGGACAATTTTTCTGCAAAGGCTTCCGCATTCGAG +
Preference number: 5 (lower is better)
Translates to: SLIHRIQESLTPSST*SSLDNFSAKASAFE
Trigger: CTCGAATGCGGAAGCCTTTGCAGAAAAATTGTCCAGAGAGCTGCAGGTGCTAGATGGGGTAAGACTTTCCTGAATTCTATGAATAAGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505501.1
CDS-3UTR CAA 90 bp CACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGAGAAATGCTGCACAGGGCGTTCAGTaGTCACTGTGGCACATAAAA +
Preference number: 5 (lower is better)
Translates to: HKQLGNKGKFPIQSLRNAAQGVQ*SLWHIK
Trigger: TTTTATGTGCCACAGTGACAACTGAACGCCCTGTGC...AGCATTTCTCAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CAA 90 bp GTACAGTATTTTAGTAGTTACATGATTAGCAAGCAACAGAGAAGTAGTGAAAGCAGGGCATCAGCAGCATaGGTGCAGGCCTCAATGCCT +
Preference number: 5 (lower is better)
Translates to: VQYFSSYMISKQQRSSESRASAA*VQASMP
Trigger: AGGCATTGAGGCCTGCACCAATGCTGCTGATGCCCT...GCTTTCACTACTTCTCTGTTGCTTGCTAATCATGTAACTACTAAAATACTGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CAA 90 bp CACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGAGAAATGCTAGCCACTCCATCAGCTaGGCATATCGGAGCAAATCT +
Preference number: 5 (lower is better)
Translates to: HKQLGNKGKFPIQSLRNASHSIS*AYRSKS
Trigger: AGATTTGCTCCGATATGCCAAGCTGATGGAGTGGCT...AGCATTTCTCAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CAA 90 bp CCAAATGCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGCGTATAAATTCATCTaGCATGGAGTGCCACACCAC +
Preference number: 5 (lower is better)
Translates to: PNALLIGQPLKHKQLGNKAYKFI*HGVPHH
Trigger: GTGGTGTGGCACTCCATGCAAGATGAATTTATACGC...TTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGCATTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS CCA 90 bp TCAGCTTGGCATATCGGAGCAAATCTCTATGAAATGGATGATGATTaGGTAAAGTCAGTTCAACAGAGTGTTGGGCAAGAGTCGAACTCT +
Preference number: 5 (lower is better)
Translates to: SAWHIGANLYEMDDD*VKSVQQSVGQESNS
Trigger: AGAGTTCGACTCTTGCCCAACACTCTGTTGAACTGACTTTACCCAATCATCATCCATTTCATAGAGATTTGCTCCGATATGCCAAGCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS CCA 90 bp ATAGAATTCAGGAAAGTCTTACCCCATCTAGCACCTGCAGCTCTCTaGACAATTTTTCTGCAAAGGCTTCCGCATTCGAGATTGCATATT +
Preference number: 5 (lower is better)
Translates to: IEFRKVLPHLAPAAL*TIFLQRLPHSRLHI
Trigger: AATATGCAATCTCGAATGCGGAAGCCTTTGCAGAAAAATTGTCCAGAGAGCTGCAGGTGCTAGATGGGGTAAGACTTTCCTGAATTCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505501.1
CDS-3UTR CAA 90 bp CCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGTCGGATTTCTTGACTTaGACCACCTTAACCTGCACA +
Preference number: 5 (lower is better)
Translates to: PLKHKQLGNKGKFPIQSLSDFLT*TTLTCT
Trigger: TGTGCAGGTTAAGGTGGTCAAAGTCAAGAAATCCGA...CAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CAA 90 bp AATGCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGGACCTAATGCAATTAGGTaGTTCAGCTCTGGCTCAATG +
Preference number: 5 (lower is better)
Translates to: NALLIGQPLKHKQLGNKGPNAIR*FSSGSM
Trigger: CATTGAGCCAGAGCTGAACAACCTAATTGCATTAGG...TCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CAA 90 bp CACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGAGAAATGCTGCGTATAAATTCATCTaGCATGGAGTGCCACACCAC +
Preference number: 5 (lower is better)
Translates to: HKQLGNKGKFPIQSLRNAAYKFI*HGVPHH
Trigger: GTGGTGTGGCACTCCATGCAAGATGAATTTATACGC...AGCATTTCTCAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS GCA 90 bp CAGCTCTCTGGACAATTTTTCTGCAAAGGCTTCCGCATTCGAGATTaGATATTCACAGCCTTCCATCATTATTTCGATATCCTGTTCTTC +
Preference number: 5 (lower is better)
Translates to: QLSGQFFCKGFRIRD*IFTAFHHYFDILFF
Trigger: GAAGAACAGGATATCGAAATAATGATGGAAGGCTGTGAATATGCAATCTCGAATGCGGAAGCCTTTGCAGAAAAATTGTCCAGAGAGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
ENST00000505501.1
CDS-3UTR CAA 90 bp AATGCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGGATCTTTGATAGCATCTTaGGCATCTACCACAGCAAGA +
Preference number: 5 (lower is better)
Translates to: NALLIGQPLKHKQLGNKGSLIAS*ASTTAR
Trigger: TCTTGCTGTGGTAGATGCCAAAGATGCTATCAAAGA...TCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CAA 90 bp AGTCTGGGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTCAGTTCAACAGAGTGTaGGGCAAGAGTCGAACTCTG +
Preference number: 5 (lower is better)
Translates to: SLGSQNSCLVFWYSVCYTQFNRV*GKSRTL
Trigger: CAGAGTTCGACTCTTGCCCAACACTCTGTTGAACTG...AGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACCCAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CAA 90 bp AATGCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGGAGTTGTGCCAGTCATCTaGATCTTTGCAACTTCAAAG +
Preference number: 5 (lower is better)
Translates to: NALLIGQPLKHKQLGNKGVVPVI*IFATSK
Trigger: CTTTGAAGTTGCAAAGATCAAGATGACTGGCACAAC...TCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CAA 90 bp CCAAATGCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAGTTGTGCCAGTCATCTaGATCTTTGCAACTTCAAAG +
Preference number: 5 (lower is better)
Translates to: PNALLIGQPLKHKQLGNKVVPVI*IFATSK
Trigger: CTTTGAAGTTGCAAAGATCAAGATGACTGGCACAAC...TTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGCATTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CAA 90 bp CCAAATGCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAACTCCTCTGATAAGTTaGGTGTATGCTTTATCCAGG +
Preference number: 5 (lower is better)
Translates to: PNALLIGQPLKHKQLGNKTPLIS*VYALSR
Trigger: CCTGGATAAAGCATACACCAAACTTATCAGAGGAGT...TTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGCATTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CAA 90 bp CCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGACTCCTCTGATAAGTTaGGTGTATGCTTTATCCAGG +
Preference number: 5 (lower is better)
Translates to: PLKHKQLGNKGKFPIQSLTPLIS*VYALSR
Trigger: CCTGGATAAAGCATACACCAAACTTATCAGAGGAGT...CAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS TCA 90 bp GTTTGGTGTATGCTTTATCCAGGTCTCCACGACGCTCAGCATTTTTaGAGATTGATTCTGCAAGTCCAGCAAATTCTTCAAATTCAGCAA +
Preference number: 5 (lower is better)
Translates to: VWCMLYPGLHDAQHF*RLILQVQQILQIQQ
Trigger: TTGCTGAATTTGAAGAATTTGCTGGACTTGCAGAATCAATCTTCAAAAATGCTGAGCGTCGTGGAGACCTGGATAAAGCATACACCAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
ENST00000511971.5
CDS-3UTR CAA 90 bp CACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGAGAAATGCTTCTTTGATAGCATCTTaGGCATCTACCACAGCAAGA +
Preference number: 5 (lower is better)
Translates to: HKQLGNKGKFPIQSLRNASLIAS*ASTTAR
Trigger: TCTTGCTGTGGTAGATGCCAAAGATGCTATCAAAGA...AGCATTTCTCAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CAA 90 bp CCACTCAAACACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGCATCAGGATGTTGACTaGTTTTTCAGATGCCATGAT +
Preference number: 5 (lower is better)
Translates to: PLKHKQLGNKGKFPIQSLHQDVD*FFRCHD
Trigger: ATCATGGCATCTGAAAAACAAGTCAACATCCTGATG...CAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTGTTTGAGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CAA 90 bp GTACAGTATTTTAGTAGTTACATGATTAGCAAGCAACAGAGAAGTAGTGAAAGCACTGAATCGCTGCTGTaGCTGTTTGACTGCCAGAAG +
Preference number: 5 (lower is better)
Translates to: VQYFSSYMISKQQRSSESTESLL*LFDCQK
Trigger: CTTCTGGCAGTCAAACAGCAACAGCAGCGATTCAGT...GCTTTCACTACTTCTCTGTTGCTTGCTAATCATGTAACTACTAAAATACTGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CAA 90 bp CCAAATGCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAAAAGATCTTATCAAATTaGGTCCTGTCAGCAACATCG +
Preference number: 5 (lower is better)
Translates to: PNALLIGQPLKHKQLGNKKILSN*VLSATS
Trigger: CGATGTTGCTGACAGGACCAAATTTGATAAGATCTT...TTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGCATTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CAA 90 bp GTACAGTATTTTAGTAGTTACATGATTAGCAAGCAACAGAGAAGTAGTGAAAGCAGCAGGGTCCACATTTaGTGCAGTCCACACATGATG +
Preference number: 5 (lower is better)
Translates to: VQYFSSYMISKQQRSSESSRVHI*CSPHMM
Trigger: CATCATGTGTGGACTGCACAAAATGTGGACCCTGCT...GCTTTCACTACTTCTCTGTTGCTTGCTAATCATGTAACTACTAAAATACTGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CAA 90 bp GGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTCAAATGAGCAGGGTCCACATTTaGTGCAGTCCACACATGATG +
Preference number: 5 (lower is better)
Translates to: GSQNSCLVFWYSVCYTQMSRVHI*CSPHMM
Trigger: CATCATGTGTGGACTGCACAAAATGTGGACCCTGCT...CATTTGAGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CAA 90 bp CACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGAGAAATGCTCTCTCTGTTTCCTGTTaGACAGCACTTTCTTTTCGA +
Preference number: 5 (lower is better)
Translates to: HKQLGNKGKFPIQSLRNALSVSC*TALSFR
Trigger: TCGAAAAGAAAGTGCTGTCAAACAGGAAACAGAGAG...AGCATTTCTCAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000346134.11
ENST00000381295.7
CDS GCA 90 bp GACAGCACTTTCTTTTCGAGGCAGTGTAGCTGTGATGGATTAGGTTaGAAGCATCAAAGACAAAGACAAGTTAATAAACTGCAATTTGCA +
Preference number: 5 (lower is better)
Translates to: DSTFFSRQCSCDGLG*KHQRQRQVNKLQFA
Trigger: TGCAAATTGCAGTTTATTAACTTGTCTTTGTCTTTGATGCTTGCAACCTAATCCATCACAGCTACACTGCCTCGAAAAGAAAGTGCTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504321.1
CDS-3UTR CAA 90 bp TCTAAGTTCACAAATGATCATCACATGAGCCCTCTTCTCCATATACACATTTGTCCCTTATCGGATTTCTaGACTTTGACCACCTTAACC +
Preference number: 5 (lower is better)
Translates to: SKFTNDHHMSPLLHIHICPLSDF*TLTTLT
Trigger: GGTTAAGGTGGTCAAAGTCAAGAAATCCGATAAGGG...ACAAATGTGTATATGGAGAAGAGGGCTCATGTGATGATCATTTGTGAACTTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CAA 90 bp TCTAAGTTCACAAATGATCATCACATGAGCCCTCTTCTCCATATACACATTTGTCCTAATGCAATTAGGTaGTTCAGCTCTGGCTCAATG +
Preference number: 5 (lower is better)
Translates to: SKFTNDHHMSPLLHIHICPNAIR*FSSGSM
Trigger: CATTGAGCCAGAGCTGAACAACCTAATTGCATTAGG...ACAAATGTGTATATGGAGAAGAGGGCTCATGTGATGATCATTTGTGAACTTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CAA 90 bp CCAAATGCATTGCTCATAGGACAACCACTCAAACACAAGCAGCTAGGCAATAAATTTGTTAAATGCAAGTaGGTAACTTACTTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: PNALLIGQPLKHKQLGNKFVKCK*VTYFLL
Trigger: GAGGAGGAAGTAAGTTACCAACTTGCATTTAACAAA...TTTATTGCCTAGCTGCTTGTGTTTGAGTGGTTGTCCTATGAGCAATGCATTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CAA 90 bp GTACAGTATTTTAGTAGTTACATGATTAGCAAGCAACAGAGAAGTAGTGAAAGCGCGTATAAATTCATCTaGCATGGAGTGCCACACCAC +
Preference number: 5 (lower is better)
Translates to: VQYFSSYMISKQQRSSESAYKFI*HGVPHH
Trigger: GTGGTGTGGCACTCCATGCAAGATGAATTTATACGC...GCTTTCACTACTTCTCTGTTGCTTGCTAATCATGTAACTACTAAAATACTGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CAA 90 bp CACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGAGAAATGCTAGTGTAGCAAACTTCTaGCTTTCTTTAGTTGTGCCA +
Preference number: 5 (lower is better)
Translates to: HKQLGNKGKFPIQSLRNASVANF*LSLVVP
Trigger: TGGCACAACTAAAGAAAGCAAGAAGTTTGCTACACT...AGCATTTCTCAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346134.11
ENST00000381295.7
CDS-3UTR CAA 90 bp GTACAGTATTTTAGTAGTTACATGATTAGCAAGCAACAGAGAAGTAGTGAAAGCTCGGATTTCTTGACTTaGACCACCTTAACCTGCACA +
Preference number: 5 (lower is better)
Translates to: VQYFSSYMISKQQRSSESSDFLT*TTLTCT
Trigger: TGTGCAGGTTAAGGTGGTCAAAGTCAAGAAATCCGA...GCTTTCACTACTTCTCTGTTGCTTGCTAATCATGTAACTACTAAAATACTGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CAA 90 bp GGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTCAAATGCCCTTATCGGATTTCTaGACTTTGACCACCTTAACC +
Preference number: 5 (lower is better)
Translates to: GSQNSCLVFWYSVCYTQMPLSDF*TLTTLT
Trigger: GGTTAAGGTGGTCAAAGTCAAGAAATCCGATAAGGG...CATTTGAGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CAA 90 bp GTACAGTATTTTAGTAGTTACATGATTAGCAAGCAACAGAGAAGTAGTGAAAGCCCCTTATCGGATTTCTaGACTTTGACCACCTTAACC +
Preference number: 5 (lower is better)
Translates to: VQYFSSYMISKQQRSSESPLSDF*TLTTLT
Trigger: GGTTAAGGTGGTCAAAGTCAAGAAATCCGATAAGGG...GCTTTCACTACTTCTCTGTTGCTTGCTAATCATGTAACTACTAAAATACTGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CAA 90 bp AGTCTGGGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTTCTTTGATAGCATCTTaGGCATCTACCACAGCAAGA +
Preference number: 5 (lower is better)
Translates to: SLGSQNSCLVFWYSVCYTSLIAS*ASTTAR
Trigger: TCTTGCTGTGGTAGATGCCAAAGATGCTATCAAAGA...AGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACCCAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CAA 90 bp GGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTCAAATGCCTAATGCAATTAGGTaGTTCAGCTCTGGCTCAATG +
Preference number: 5 (lower is better)
Translates to: GSQNSCLVFWYSVCYTQMPNAIR*FSSGSM
Trigger: CATTGAGCCAGAGCTGAACAACCTAATTGCATTAGG...CATTTGAGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CAA 90 bp AGTCTGGGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTCGACGCTCAGCATTTTaGAAGATTGATTCTGCAAGT +
Preference number: 5 (lower is better)
Translates to: SLGSQNSCLVFWYSVCYTRRSAF*KIDSAS
Trigger: ACTTGCAGAATCAATCTTCAAAAATGCTGAGCGTCG...AGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACCCAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CAA 90 bp TCTAAGTTCACAAATGATCATCACATGAGCCCTCTTCTCCATATACACATTTGTACTCCTCTGATAAGTTaGGTGTATGCTTTATCCAGG +
Preference number: 5 (lower is better)
Translates to: SKFTNDHHMSPLLHIHICTPLIS*VYALSR
Trigger: CCTGGATAAAGCATACACCAAACTTATCAGAGGAGT...ACAAATGTGTATATGGAGAAGAGGGCTCATGTGATGATCATTTGTGAACTTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CAA 90 bp CACAAGCAGCTAGGCAATAAAGGAAAATTTCCCATCCAGTCATTGAGAAATGCTTCTCAAAACAGTTGCTaGGTATTTTGGTATAGTGTC +
Preference number: 5 (lower is better)
Translates to: HKQLGNKGKFPIQSLRNASQNSC*VFWYSV
Trigger: GACACTATACCAAAATACCAAGCAACTGTTTTGAGA...AGCATTTCTCAATGACTGGATGGGAAATTTTCCTTTATTGCCTAGCTGCTTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS TCA 90 bp ATCAATTTTCTTCCGGAGATATCGCTGATTCAATTTCCAAATGCATaGAATAAATGCATTCTTTTCAGCAGTGCTGCTGGCAACCCATTT +
Preference number: 5 (lower is better)
Translates to: INFLPEISLIQFPNA*NKCILFSSAAGNPF
Trigger: AAATGGGTTGCCAGCAGCACTGCTGAAAAGAATGCATTTATTTCATGCATTTGGAAATTGAATCAGCGATATCTCCGGAAGAAAATTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
ENST00000505501.1
CDS-3UTR CAA 90 bp AGTCTGGGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTCATCAGGATGTTGACTaGTTTTTCAGATGCCATGAT +
Preference number: 5 (lower is better)
Translates to: SLGSQNSCLVFWYSVCYTHQDVD*FFRCHD
Trigger: ATCATGGCATCTGAAAAACAAGTCAACATCCTGATG...AGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACCCAGACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CAA 90 bp TCTAAGTTCACAAATGATCATCACATGAGCCCTCTTCTCCATATACACATTTGTCTGATCATGACCCTGTaGAACAAAAACATTGTTGAG +
Preference number: 5 (lower is better)
Translates to: SKFTNDHHMSPLLHIHICLIMTL*NKNIVE
Trigger: CTCAACAATGTTTTTGTTCAACAGGGTCATGATCAG...ACAAATGTGTATATGGAGAAGAGGGCTCATGTGATGATCATTTGTGAACTTAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CAA 90 bp AGTCTGGGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTCTGATCATGACCCTGTaGAACAAAAACATTGTTGAG +
Preference number: 5 (lower is better)
Translates to: SLGSQNSCLVFWYSVCYTLIMTL*NKNIVE
Trigger: CTCAACAATGTTTTTGTTCAACAGGGTCATGATCAG...AGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACCCAGACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CAA 90 bp GGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTCAAATGGTTGTGCCAGTCATCTaGATCTTTGCAACTTCAAAG +
Preference number: 5 (lower is better)
Translates to: GSQNSCLVFWYSVCYTQMVVPVI*IFATSK
Trigger: CTTTGAAGTTGCAAAGATCAAGATGACTGGCACAAC...CATTTGAGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CAA 90 bp GGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTCAAATGCGACGCTCAGCATTTTaGAAGATTGATTCTGCAAGT +
Preference number: 5 (lower is better)
Translates to: GSQNSCLVFWYSVCYTQMRRSAF*KIDSAS
Trigger: ACTTGCAGAATCAATCTTCAAAAATGCTGAGCGTCG...CATTTGAGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CAA 90 bp GTACAGTATTTTAGTAGTTACATGATTAGCAAGCAACAGAGAAGTAGTGAAAGCCGACGCTCAGCATTTTaGAAGATTGATTCTGCAAGT +
Preference number: 5 (lower is better)
Translates to: VQYFSSYMISKQQRSSESRRSAF*KIDSAS
Trigger: ACTTGCAGAATCAATCTTCAAAAATGCTGAGCGTCG...GCTTTCACTACTTCTCTGTTGCTTGCTAATCATGTAACTACTAAAATACTGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CAA 90 bp GGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTCAAATGCTCTCTGTTTCCTGTTaGACAGCACTTTCTTTTCGA +
Preference number: 5 (lower is better)
Translates to: GSQNSCLVFWYSVCYTQMLSVSC*TALSFR
Trigger: TCGAAAAGAAAGTGCTGTCAAACAGGAAACAGAGAG...CATTTGAGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000346134.11
ENST00000381295.7
CDS-3UTR CAA 90 bp GTACAGTATTTTAGTAGTTACATGATTAGCAAGCAACAGAGAAGTAGTGAAAGCCATCAGGATGTTGACTaGTTTTTCAGATGCCATGAT +
Preference number: 5 (lower is better)
Translates to: VQYFSSYMISKQQRSSESHQDVD*FFRCHD
Trigger: ATCATGGCATCTGAAAAACAAGTCAACATCCTGATG...GCTTTCACTACTTCTCTGTTGCTTGCTAATCATGTAACTACTAAAATACTGTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CAA 90 bp TCTAAGTTCACAAATGATCATCACATGAGCCCTCTTCTCCATATACACATTTGTAGAGATCTGATCCATTaGTTCTTTTACACTTTGGAG +
Preference number: 5 (lower is better)
Translates to: SKFTNDHHMSPLLHIHICRDLIH*FFYTLE
Trigger: CTCCAAAGTGTAAAAGAACAAATGGATCAGATCTCT...ACAAATGTGTATATGGAGAAGAGGGCTCATGTGATGATCATTTGTGAACTTAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CAA 90 bp GGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTCAAATGCTGATCATGACCCTGTaGAACAAAAACATTGTTGAG +
Preference number: 5 (lower is better)
Translates to: GSQNSCLVFWYSVCYTQMLIMTL*NKNIVE
Trigger: CTCAACAATGTTTTTGTTCAACAGGGTCATGATCAG...CATTTGAGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CAA 90 bp GTACAGTATTTTAGTAGTTACATGATTAGCAAGCAACAGAGAAGTAGTGAAAGCAAGATCTTATCAAATTaGGTCCTGTCAGCAACATCG +
Preference number: 5 (lower is better)
Translates to: VQYFSSYMISKQQRSSESKILSN*VLSATS
Trigger: CGATGTTGCTGACAGGACCAAATTTGATAAGATCTT...GCTTTCACTACTTCTCTGTTGCTTGCTAATCATGTAACTACTAAAATACTGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CAA 90 bp AGTCTGGGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTTTTGTTAAATGCAAGTaGGTAACTTACTTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: SLGSQNSCLVFWYSVCYTFVKCK*VTYFLL
Trigger: GAGGAGGAAGTAAGTTACCAACTTGCATTTAACAAA...AGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACCCAGACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CAA 90 bp AGTCTGGGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTTCTCAAAACAGTTGCTaGGTATTTTGGTATAGTGTC +
Preference number: 5 (lower is better)
Translates to: SLGSQNSCLVFWYSVCYTSQNSC*VFWYSV
Trigger: GACACTATACCAAAATACCAAGCAACTGTTTTGAGA...AGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACCCAGACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CAA 90 bp GTACAGTATTTTAGTAGTTACATGATTAGCAAGCAACAGAGAAGTAGTGAAAGCAGTGTAGCAAACTTCTaGCTTTCTTTAGTTGTGCCA +
Preference number: 5 (lower is better)
Translates to: VQYFSSYMISKQQRSSESSVANF*LSLVVP
Trigger: TGGCACAACTAAAGAAAGCAAGAAGTTTGCTACACT...GCTTTCACTACTTCTCTGTTGCTTGCTAATCATGTAACTACTAAAATACTGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000346134.11
ENST00000381295.7
CDS-3UTR CAA 90 bp GTACAGTATTTTAGTAGTTACATGATTAGCAAGCAACAGAGAAGTAGTGAAAGCAGAGATCTGATCCATTaGTTCTTTTACACTTTGGAG +
Preference number: 5 (lower is better)
Translates to: VQYFSSYMISKQQRSSESRDLIH*FFYTLE
Trigger: CTCCAAAGTGTAAAAGAACAAATGGATCAGATCTCT...GCTTTCACTACTTCTCTGTTGCTTGCTAATCATGTAACTACTAAAATACTGTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS-3UTR CAA 90 bp GGTTCTCAAAACAGTTGCTTGGTATTTTGGTATAGTGTCTGTTATACTCAAATGTTTGTTAAATGCAAGTaGGTAACTTACTTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: GSQNSCLVFWYSVCYTQMFVKCK*VTYFLL
Trigger: GAGGAGGAAGTAAGTTACCAACTTGCATTTAACAAA...CATTTGAGTATAACAGACACTATACCAAAATACCAAGCAACTGTTTTGAGAACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS CCA 72 bp GAGACAGCAGCCGGACTGAGGAGCCGCCTTAGACCCTaGTGCCTGTCAGCTCGTCTGTCCGCCGCCGCCGGG +
Preference number: 6 (lower is better)
Translates to: ETAAGLRSRLRP*CLSARLSAAAG
Trigger: CCCGGCGGCGGCGGACAGACGAGCTGACAGGCACCAGGGTCTAAGGCGGCTCCTCAGTCCGGCTGCTGTCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381295.7
CDS TCA 72 bp GGCAGCCGCGGCCGAAGGCTTACCGCAAGGCCGGACTaGGCCTGGCTGTGCCGAGGCGGGTCTTCCAAAACG +
Preference number: 6 (lower is better)
Translates to: GSRGRRLTARPD*AWLCRGGSSKT
Trigger: CGTTTTGGAAGACCCGCCTCGGCACAGCCAGGCTCAGTCCGGCCTTGCGGTAAGCCTTCGGCCGCGGCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381295.7
CDS TCA 72 bp GGTGCCCGACCCCAGGCGTGGAGACAGCAGCCGGACTaGGGAGCCGCCTTAGACCCTGGTGCCTGTCAGCTC +
Preference number: 6 (lower is better)
Translates to: GARPQAWRQQPD*GAALDPGACQL
Trigger: GAGCTGACAGGCACCAGGGTCTAAGGCGGCTCCTCAGTCCGGCTGCTGTCTCCACGCCTGGGGTCGGGCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381295.7
CDS GCA 72 bp ACAGCAGCCGGACTGAGGAGCCGCCTTAGACCCTGGTaGCTGTCAGCTCGTCTGTCCGCCGCCGCCGGGACT +
Preference number: 6 (lower is better)
Translates to: TAAGLRSRLRPW*LSARLSAAAGT
Trigger: AGTCCCGGCGGCGGCGGACAGACGAGCTGACAGGCACCAGGGTCTAAGGCGGCTCCTCAGTCCGGCTGCTGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381295.7
CDS GCA 72 bp CGGGACAAACGGGGAAAGGAAGGTCAGAAGGAGCGGTaGCCGACCCCAGGCGTGGAGACAGCAGCCGGACTG +
Preference number: 6 (lower is better)
Translates to: RDKRGKEGQKER*PTPGVETAAGL
Trigger: CAGTCCGGCTGCTGTCTCCACGCCTGGGGTCGGGCACCGCTCCTTCTGACCTTCCTTTCCCCGTTTGTCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381295.7
CDS GCA 72 bp AAGTCATGGCCTGGTCGAAGAGCTACATTCATGCACTaGAGAAGGGCATCAGCAGCATTGGTGCAGGCCTCA +
Preference number: 6 (lower is better)
Translates to: KSWPGRRATFMH*RRASAALVQAS
Trigger: TGAGGCCTGCACCAATGCTGCTGATGCCCTTCTGCAGTGCATGAATGTAGCTCTTCGACCAGGCCATGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS GCA 72 bp GAAGCAAGTCATGGCCTGGTCGAAGAGCTACATTCATaGACTGCAGAAGGGCATCAGCAGCATTGGTGCAGG +
Preference number: 6 (lower is better)
Translates to: EASHGLVEELHS*TAEGHQQHWCR
Trigger: CCTGCACCAATGCTGCTGATGCCCTTCTGCAGTGCATGAATGTAGCTCTTCGACCAGGCCATGACTTGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS CAA 90 bp GGTCGAAGAGCTACATTCATGCACTGCAGAAGGGCATCAGCAGCATaGGTGCAGGCCTCAATGCCTCTGGAAGAAGCAAGATCTCCTTCC +
Preference number: 6 (lower is better)
Translates to: GRRATFMHCRRASAA*VQASMPLEEARSPS
Trigger: GGAAGGAGATCTTGCTTCTTCCAGAGGCATTGAGGCCTGCACCAATGCTGCTGATGCCCTTCTGCAGTGCATGAATGTAGCTCTTCGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS CAA 90 bp CAGTCTCCGGGCAAAAAGCTCTCGCAAATCACTGAATCGCTGCTGTaGCTGTTTGACTGCCAGAAGCAAGTCATGGCCTGGTCGAAGAGC +
Preference number: 6 (lower is better)
Translates to: QSPGKKLSQITESLL*LFDCQKQVMAWSKS
Trigger: GCTCTTCGACCAGGCCATGACTTGCTTCTGGCAGTCAAACAGCAACAGCAGCGATTCAGTGATTTGCGAGAGCTTTTTGCCCGGAGACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS CAA 72 bp GCTACATTCATGCACTGCAGAAGGGCATCAGCAGCATaGGTGCAGGCCTCAATGCCTCTGGAAGAAGCAAGA +
Preference number: 6 (lower is better)
Translates to: ATFMHCRRASAA*VQASMPLEEAR
Trigger: TCTTGCTTCTTCCAGAGGCATTGAGGCCTGCACCAATGCTGCTGATGCCCTTCTGCAGTGCATGAATGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS CAA 90 bp CGGGCAAAAAGCTCTCGCAAATCACTGAATCGCTGCTGTTGCTGTTaGACTGCCAGAAGCAAGTCATGGCCTGGTCGAAGAGCTACATTC +
Preference number: 6 (lower is better)
Translates to: RAKSSRKSLNRCCCC*TARSKSWPGRRATF
Trigger: GAATGTAGCTCTTCGACCAGGCCATGACTTGCTTCTGGCAGTCAAACAGCAACAGCAGCGATTCAGTGATTTGCGAGAGCTTTTTGCCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS GCA 72 bp TCGCAAATCACTGAATCGCTGCTGTTGCTGTTTGACTaGCAGAAGCAAGTCATGGCCTGGTCGAAGAGCTAC +
Preference number: 6 (lower is better)
Translates to: SQITESLLLLFD*QKQVMAWSKSY
Trigger: GTAGCTCTTCGACCAGGCCATGACTTGCTTCTGGCAGTCAAACAGCAACAGCAGCGATTCAGTGATTTGCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS GCA 72 bp CTCCGGGCAAAAAGCTCTCGCAAATCACTGAATCGCTaGTGTTGCTGTTTGACTGCCAGAAGCAAGTCATGG +
Preference number: 6 (lower is better)
Translates to: LRAKSSRKSLNR*CCCLTARSKSW
Trigger: CCATGACTTGCTTCTGGCAGTCAAACAGCAACAGCAGCGATTCAGTGATTTGCGAGAGCTTTTTGCCCGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS CAA 72 bp AGCTCTCGCAAATCACTGAATCGCTGCTGTTGCTGTTaGACTGCCAGAAGCAAGTCATGGCCTGGTCGAAGA +
Preference number: 6 (lower is better)
Translates to: SSRKSLNRCCCC*TARSKSWPGRR
Trigger: TCTTCGACCAGGCCATGACTTGCTTCTGGCAGTCAAACAGCAACAGCAGCGATTCAGTGATTTGCGAGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS CAA 72 bp GGCAAAAAGCTCTCGCAAATCACTGAATCGCTGCTGTaGCTGTTTGACTGCCAGAAGCAAGTCATGGCCTGG +
Preference number: 6 (lower is better)
Translates to: GKKLSQITESLL*LFDCQKQVMAW
Trigger: CCAGGCCATGACTTGCTTCTGGCAGTCAAACAGCAACAGCAGCGATTCAGTGATTTGCGAGAGCTTTTTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS GCA 72 bp GCCATGATTGACTGGATGTTAGCCCCATCTAGCACCTaGAGCTCTCTGGACAATTTTTCTGCAAAGGCTTCC +
Preference number: 6 (lower is better)
Translates to: AMIDWMLAPSST*SSLDNFSAKAS
Trigger: GGAAGCCTTTGCAGAAAAATTGTCCAGAGAGCTGCAGGTGCTAGATGGGGCTAACATCCAGTCAATCATGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS GCA 72 bp GCAAAAAGCTCTCGCAAATCACTGAATCGCTGCTGTTaGTGTTTGACTGCCAGAAGCAAGTCATGGCCTGGT +
Preference number: 6 (lower is better)
Translates to: AKSSRKSLNRCC*CLTARSKSWPG
Trigger: ACCAGGCCATGACTTGCTTCTGGCAGTCAAACAGCAACAGCAGCGATTCAGTGATTTGCGAGAGCTTTTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS GCA 72 bp TCAGATGAAACAGGCAGTGGTGTGCCACAATTATGTTaGCGTGATAATGTTCCTCCATCCAGGTCCTCTGCT +
Preference number: 6 (lower is better)
Translates to: SDETGSGVPQLC*RDNVPPSRSSA
Trigger: AGCAGAGGACCTGGATGGAGGAACATTATCACGGCAACATAATTGTGGCACACCACTGCCTGTTTCATCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
ENST00000504321.1
ENST00000509302.5
ENST00000511971.5
CDS CCA 72 bp AGGAAAGTCTTACCCCATCTAGCACCTGCAGCTCTCTaGACAATTTTTCTGCAAAGGCTTCCGCATTCGAGA +
Preference number: 6 (lower is better)
Translates to: RKVLPHLAPAAL*TIFLQRLPHSR
Trigger: TCTCGAATGCGGAAGCCTTTGCAGAAAAATTGTCCAGAGAGCTGCAGGTGCTAGATGGGGTAAGACTTTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505501.1
CDS TCA 72 bp AACTCTGATCATGACCCTGTTGAACAAAAACATTGTTaGGGTGACTGGCCAGTCTCCGGGCAAAAAGCTCTC +
Preference number: 6 (lower is better)
Translates to: NSDHDPVEQKHC*GDWPVSGQKAL
Trigger: GAGAGCTTTTTGCCCGGAGACTGGCCAGTCACCTCAACAATGTTTTTGTTCAACAGGGTCATGATCAGAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS GCA 72 bp CCCTTATCGGATTTCTTGACTTTGACCACCTTAACCTaGACAGGGCGTTCAGTTGTCACTGTGGCACATAAA +
Preference number: 6 (lower is better)
Translates to: PLSDFLTLTTLT*TGRSVVTVAHK
Trigger: TTTATGTGCCACAGTGACAACTGAACGCCCTGTGCAGGTTAAGGTGGTCAAAGTCAAGAAATCCGATAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
ENST00000505501.1
CDS GCA 72 bp TTTGGCATCTACCACAGCAAGATCTCGAAGGGCCCATaGAATCTGCCTTTTGTAGAAATCTCCCTTATCGGA +
Preference number: 6 (lower is better)
Translates to: FGIYHSKISKGP*NLPFVEISLIG
Trigger: TCCGATAAGGGAGATTTCTACAAAAGGCAGATTGCATGGGCCCTTCGAGATCTTGCTGTGGTAGATGCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
ENST00000505501.1
CDS GCA 72 bp AAGTTGGTAACTTACTTCCTCCTCCCTTATGCCCTGTaGCACGCGAGCTTCAACACCTTCAAAGAAATGCTT +
Preference number: 6 (lower is better)
Translates to: KLVTYFLLPYAL*HASFNTFKEML
Trigger: AAGCATTTCTTTGAAGGTGTTGAAGCTCGCGTGGCACAGGGCATAAGGGAGGAGGAAGTAAGTTACCAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506936.1
ENST00000511971.5
CDS CAA 90 bp AGGCGTTCATCATTTGGTGTAAAAATGTCTCTTTGTAATGCATGCTaGATTGCTGTCATCTTTTCTCAGCGCAAGGCCGGACTGAGCCTG +
Preference number: 6 (lower is better)
Translates to: RRSSFGVKMSLCNAC*IAVIFSQRKAGLSL
Trigger: CAGGCTCAGTCCGGCCTTGCGCTGAGAAAAGATGACAGCAATCAAGCATGCATTACAAAGAGACATTTTTACACCAAATGATGAACGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346134.11
ENST00000349598.6
CDS GCA 72 bp AAGTTGGTAACTTACTTCCTCCTCCCTTATGCCCTGTaGCACGCGAGCTTCAACACCTTCAAAGAAATGATT +
Preference number: 6 (lower is better)
Translates to: KLVTYFLLPYAL*HASFNTFKEMI
Trigger: AATCATTTCTTTGAAGGTGTTGAAGCTCGCGTGGCACAGGGCATAAGGGAGGAGGAAGTAAGTTACCAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS GCA 72 bp CATAGAATTCAGGAAAGTCTTACCCCATCTAGCACCTaGAGCTCTCTGGACAATTTTTCTGCAAAGGCTTCC +
Preference number: 6 (lower is better)
Translates to: HRIQESLTPSST*SSLDNFSAKAS
Trigger: GGAAGCCTTTGCAGAAAAATTGTCCAGAGAGCTGCAGGTGCTAGATGGGGTAAGACTTTCCTGAATTCTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505501.1
CDS CCA 72 bp CAAGATCTCCTTCCTGAAGGGCCTTTATATGACCTTTaGCCAAGTCCATGTGGTTCACAAGGAACTCTATCT +
Preference number: 6 (lower is better)
Translates to: QDLLPEGPLYDL*PSPCGSQGTLS
Trigger: AGATAGAGTTCCTTGTGAACCACATGGACTTGGCCAAAGGTCATATAAAGGCCCTTCAGGAAGGAGATCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS GCA 72 bp GGATCATATCTTTCTCAGATGAAACAGGCAGTGGTGTaGCACAATTATGTTGCCGTGATAATGTTCCTCCAT +
Preference number: 6 (lower is better)
Translates to: GSYLSQMKQAVV*HNYVAVIMFLH
Trigger: ATGGAGGAACATTATCACGGCAACATAATTGTGGCACACCACTGCCTGTTTCATCTGAGAAAGATATGATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
ENST00000504321.1
ENST00000509302.5
ENST00000511971.5
CDS GCA 72 bp CATAACCACATCCCTGGGGGTCTTCTGGCTTTCATTTaGTACTTTCTCCACATTAACAAATACTCCTCTGAT +
Preference number: 6 (lower is better)
Translates to: HNHIPGGLLAFI*YFLHINKYSSD
Trigger: ATCAGAGGAGTATTTGTTAATGTGGAGAAAGTAGCAAATGAAAGCCAGAAGACCCCCAGGGATGTGGTTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
ENST00000511971.5
CDS CAA 90 bp GCAGCTCTCTGGACAATTTTTCTGCAAAGGCTTCCGCATTCGAGATaGCATATTCACAGCCTTCCATCATTATTTCGATATCCTGTTCTT +
Preference number: 6 (lower is better)
Translates to: AALWTIFLQRLPHSR*HIHSLPSLFRYPVL
Trigger: AAGAACAGGATATCGAAATAATGATGGAAGGCTGTGAATATGCAATCTCGAATGCGGAAGCCTTTGCAGAAAAATTGTCCAGAGAGCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
ENST00000505501.1
CDS TCA 72 bp TCATCTACTACTTCTTCATCACCTCCTGTCACACTCTaGTTTTCTCCACTTGGAACAGATTCTTCCAAAAGC +
Preference number: 6 (lower is better)
Translates to: SSTTSSSPPVTL*FSPLGTDSSKS
Trigger: GCTTTTGGAAGAATCTGTTCCAAGTGGAGAAAATCAGAGTGTGACAGGAGGTGATGAAGAAGTAGTAGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
ENST00000505501.1
CDS TCA 72 bp ATGCTTTATCCAGGTCTCCACGACGCTCAGCATTTTTaGAGATTGATTCTGCAAGTCCAGCAAATTCTTCAA +
Preference number: 6 (lower is better)
Translates to: MLYPGLHDAQHF*RLILQVQQILQ
Trigger: TTGAAGAATTTGCTGGACTTGCAGAATCAATCTTCAAAAATGCTGAGCGTCGTGGAGACCTGGATAAAGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
ENST00000511971.5
CDS CCA 72 bp CATATCGGAGCAAATCTCTATGAAATGGATGATGATTaGGTAAAGTCAGTTCAACAGAGTGTTGGGCAAGAG +
Preference number: 6 (lower is better)
Translates to: HIGANLYEMDDD*VKSVQQSVGQE
Trigger: CTCTTGCCCAACACTCTGTTGAACTGACTTTACCCAATCATCATCCATTTCATAGAGATTTGCTCCGATATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS CAA 72 bp ACTTTCTCCACATTAACAAATACTCCTCTGATAAGTTaGGTGTATGCTTTATCCAGGTCTCCACGACGCTCA +
Preference number: 6 (lower is better)
Translates to: TFSTLTNTPLIS*VYALSRSPRRS
Trigger: TGAGCGTCGTGGAGACCTGGATAAAGCATACACCAAACTTATCAGAGGAGTATTTGTTAATGTGGAGAAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
ENST00000511971.5
CDS CAA 90 bp AGTTTGGTGTATGCTTTATCCAGGTCTCCACGACGCTCAGCATTTTaGAAGATTGATTCTGCAAGTCCAGCAAATTCTTCAAATTCAGCA +
Preference number: 6 (lower is better)
Translates to: SLVYALSRSPRRSAF*KIDSASPANSSNSA
Trigger: TGCTGAATTTGAAGAATTTGCTGGACTTGCAGAATCAATCTTCAAAAATGCTGAGCGTCGTGGAGACCTGGATAAAGCATACACCAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
ENST00000511971.5
CDS CAA 90 bp TCATTTGCTACTTTCTCCACATTAACAAATACTCCTCTGATAAGTTaGGTGTATGCTTTATCCAGGTCTCCACGACGCTCAGCATTTTTG +
Preference number: 6 (lower is better)
Translates to: SFATFSTLTNTPLIS*VYALSRSPRRSAFL
Trigger: CAAAAATGCTGAGCGTCGTGGAGACCTGGATAAAGCATACACCAAACTTATCAGAGGAGTATTTGTTAATGTGGAGAAAGTAGCAAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
ENST00000511971.5
CDS GCA 72 bp TCATCATTTGGTGTAAAAATGTCTCTTTGTAATGCATaGTTGATTGCTGTCATCTTTTCTCAGCGCAAGGCC +
Preference number: 6 (lower is better)
Translates to: SSFGVKMSLCNA*LIAVIFSQRKA
Trigger: GGCCTTGCGCTGAGAAAAGATGACAGCAATCAAGCATGCATTACAAAGAGACATTTTTACACCAAATGATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000346134.11
ENST00000349598.6
CDS GCA 72 bp GGACAATTTTTCTGCAAAGGCTTCCGCATTCGAGATTaGATATTCACAGCCTTCCATCATTATTTCGATATC +
Preference number: 6 (lower is better)
Translates to: GQFFCKGFRIRD*IFTAFHHYFDI
Trigger: GATATCGAAATAATGATGGAAGGCTGTGAATATGCAATCTCGAATGCGGAAGCCTTTGCAGAAAAATTGTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
ENST00000505501.1
CDS GCA 72 bp CACATTAACAAATACTCCTCTGATAAGTTTGGTGTATaGTTTATCCAGGTCTCCACGACGCTCAGCATTTTT +
Preference number: 6 (lower is better)
Translates to: HINKYSSDKFGV*FIQVSTTLSIF
Trigger: AAAAATGCTGAGCGTCGTGGAGACCTGGATAAAGCATACACCAAACTTATCAGAGGAGTATTTGTTAATGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
ENST00000511971.5
CDS CCA 72 bp TTCCATAATCTGTACTCTTTAGCCACTCCATCAGCTTaGCATATCGGAGCAAATCTCTATGAAATGGATGAT +
Preference number: 6 (lower is better)
Translates to: FHNLYSLATPSA*HIGANLYEMDD
Trigger: ATCATCCATTTCATAGAGATTTGCTCCGATATGCCAAGCTGATGGAGTGGCTAAAGAGTACAGATTATGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
CDS CCA 72 bp CTCCCCAAATCCAGAATCTCAGCCAACTGTCTTCATTaGCTTAACAGGAATAGTTCATCTTTTGAACAAGAA +
Preference number: 6 (lower is better)
Translates to: LPKSRISANCLH*LNRNSSSFEQE
Trigger: TTCTTGTTCAAAAGATGAACTATTCCTGTTAAGCCAATGAAGACAGTTGGCTGAGATTCTGGATTTGGGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505501.1
CDS TCA 72 bp AGGTCCTCTGCTTCAGCCATAGTTCCAGGCATACTTTaGTGTTGCTGTAGTTTGAAAAATTTACTTATGAAG +
Preference number: 6 (lower is better)
Translates to: RSSASAIVPGIL*CCCSLKNLLMK
Trigger: CTTCATAAGTAAATTTTTCAAACTACAGCAACATCAAAGTATGCCTGGAACTATGGCTGAAGCAGAGGACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
ENST00000509302.5
ENST00000511971.5
CDS GCA 72 bp TCATCATTTGGTGTAAAAATGTCTCTTTGTAATGCATaGTTGATTGCTGTCATCTTTTCTCAGCGGGACAAA +
Preference number: 6 (lower is better)
Translates to: SSFGVKMSLCNA*LIAVIFSQRDK
Trigger: TTTGTCCCGCTGAGAAAAGATGACAGCAATCAAGCATGCATTACAAAGAGACATTTTTACACCAAATGATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381295.7
CDS CAA 72 bp CTTTCCAGGGTACTCCTTAATGACTTTACGAAGTTCTaGTTTGTTAAATGCAAGTTGGTAACTTACTTCCTC +
Preference number: 6 (lower is better)
Translates to: LSRVLLNDFTKF*FVKCKLVTYFL
Trigger: GAGGAAGTAAGTTACCAACTTGCATTTAACAAACAAGAACTTCGTAAAGTCATTAAGGAGTACCCTGGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
ENST00000506936.1
ENST00000511971.5
CDS CAA 90 bp TTTTACTTCCTTTCCAGGGTACTCCTTAATGACTTTACGAAGTTCTaGTTTGTTAAATGCAAGTTGGTAACTTACTTCCTCCTCCCTTAT +
Preference number: 6 (lower is better)
Translates to: FYFLSRVLLNDFTKF*FVKCKLVTYFLLPY
Trigger: ATAAGGGAGGAGGAAGTAAGTTACCAACTTGCATTTAACAAACAAGAACTTCGTAAAGTCATTAAGGAGTACCCTGGAAAGGAAGTAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
ENST00000506936.1
ENST00000511971.5
CDS CAA 72 bp TTAAAGCTATCAATTTTGTCTCCTAATGCAATTAGGTaGTTCAGCTCTGGCTCAATGCAGCGAAATATTTTA +
Preference number: 6 (lower is better)
Translates to: LKLSILSPNAIR*FSSGSMQRNIL
Trigger: TAAAATATTTCGCTGCATTGAGCCAGAGCTGAACAACCTAATTGCATTAGGAGACAAAATTGATAGCTTTAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000346134.11
ENST00000349598.6
ENST00000381295.7
ENST00000511971.5