RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EXD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000081177

Ensembl transcript IDs: ENST00000312994.9, ENST00000409014.5, ENST00000409018.7, ENST00000409242.5, ENST00000409675.5, ENST00000409949.5, ENST00000413191.1, ENST00000461908.5, ENST00000465286.1, ENST00000487724.5, ENST00000489133.6, ENST00000492815.5, ENST00000494629.1

Found 719 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACGTGGGTTCATGGGCTGCTACTGATGGCCGATGGTGACTGTGTCTaGTATATCCATGCACACATACCATGGCACTGCCAGGAGGCAGGG +
Preference number: 1 (lower is better)
Translates to: TWVHGLLLMADGDCV*YIHAHIPWHCQEAG
Trigger: CCCTGCCTCCTGGCAGTGCCATGGTATGTGTGCATGGATATACCAGACACAGTCACCATCGGCCATCAGTAGCAGCCCATGAACCCACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312994.9
3UTR TCA 90 bp CAGGATGTGCACGTGGGTTCATGGGCTGCTACTGATGGCCGATGGTaGCTGTGTCTGGTATATCCATGCACACATACCATGGCACTGCCA +
Preference number: 1 (lower is better)
Translates to: QDVHVGSWAATDGRW*LCLVYPCTHTMALP
Trigger: TGGCAGTGCCATGGTATGTGTGCATGGATATACCAGACACAGTCACCATCGGCCATCAGTAGCAGCCCATGAACCCACGTGCACATCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312994.9
3UTR GCA 90 bp GATGGTGACTGTGTCTGGTATATCCATGCACACATACCATGGCACTaGCAGGAGGCAGGGACCTGTAGGATAAATAGCCCCTCCCCTAGG +
Preference number: 1 (lower is better)
Translates to: DGDCVWYIHAHIPWH*QEAGTCRINSPSPR
Trigger: CCTAGGGGAGGGGCTATTTATCCTACAGGTCCCTGCCTCCTGGCAGTGCCATGGTATGTGTGCATGGATATACCAGACACAGTCACCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312994.9
3UTR CCA 90 bp ATGGCCGATGGTGACTGTGTCTGGTATATCCATGCACACATACCATaGCACTGCCAGGAGGCAGGGACCTGTAGGATAAATAGCCCCTCC +
Preference number: 1 (lower is better)
Translates to: MADGDCVWYIHAHIP*HCQEAGTCRINSPS
Trigger: GGAGGGGCTATTTATCCTACAGGTCCCTGCCTCCTGGCAGTGCCATGGTATGTGTGCATGGATATACCAGACACAGTCACCATCGGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312994.9
3UTR TCA 90 bp GAAGAGCAAGATGCAGGATGTGCACGTGGGTTCATGGGCTGCTACTaGTGGCCGATGGTGACTGTGTCTGGTATATCCATGCACACATAC +
Preference number: 1 (lower is better)
Translates to: EEQDAGCARGFMGCY*WPMVTVSGISMHTY
Trigger: GTATGTGTGCATGGATATACCAGACACAGTCACCATCGGCCATCAGTAGCAGCCCATGAACCCACGTGCACATCCTGCATCTTGCTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312994.9
3UTR TCA 90 bp CAGTTCTGGGGCAGGAGGAGTGCAACAAGCAGGCAACAAACAGCATaGAAGGAAAAGCTGAGTGAATTTCAAAGTTCTATTGGGAGATGG +
Preference number: 1 (lower is better)
Translates to: QFWGRRSATSRQQTA*KEKLSEFQSSIGRW
Trigger: CCATCTCCCAATAGAACTTTGAAATTCACTCAGCTTTTCCTTTCATGCTGTTTGTTGCCTGCTTGTTGCACTCCTCCTGCCCCAGAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
3UTR TCA 90 bp CATAACACAGCCAGGAGGCAGAGACCCCATAATAACCCACTACAGTaGATGCACATTCCTCAAAGTGGCTGGTACTATTTGTTTTCAAGG +
Preference number: 1 (lower is better)
Translates to: HNTARRQRPHNNPLQ*MHIPQSGWYYLFSR
Trigger: CCTTGAAAACAAATAGTACCAGCCACTTTGAGGAATGTGCATTCACTGTAGTGGGTTATTATGGGGTCTCTGCCTCCTGGCTGTGTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312994.9
3UTR CCA 90 bp ACTTTGCTGCTGGCTCTATTTTACTGCGCCTCACAGAAAGCTCCATaGGAAAACCCTTTCCCTAGCACCTTAAATGACCTTAAGTGTTTC +
Preference number: 1 (lower is better)
Translates to: TLLLALFYCASQKAP*ENPFPSTLNDLKCF
Trigger: GAAACACTTAAGGTCATTTAAGGTGCTAGGGAAAGGGTTTTCCCATGGAGCTTTCTGTGAGGCGCAGTAAAATAGAGCCAGCAGCAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312994.9
3UTR GCA 90 bp ACACAGCCAGGAGGCAGAGACCCCATAATAACCCACTACAGTGAATaGACATTCCTCAAAGTGGCTGGTACTATTTGTTTTCAAGGATTT +
Preference number: 1 (lower is better)
Translates to: TQPGGRDPIITHYSE*TFLKVAGTICFQGF
Trigger: AAATCCTTGAAAACAAATAGTACCAGCCACTTTGAGGAATGTGCATTCACTGTAGTGGGTTATTATGGGGTCTCTGCCTCCTGGCTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312994.9
3UTR CCA 90 bp CTGAGTTGTGTCACACAGGCTTTGACAATTAATGATGTACTAAAATaGGAAGAGGTGACTCTTCAACCTTGGCTCCAGCTTCCCACTTGT +
Preference number: 1 (lower is better)
Translates to: LSCVTQALTINDVLK*EEVTLQPWLQLPTC
Trigger: ACAAGTGGGAAGCTGGAGCCAAGGTTGAAGAGTCACCTCTTCCCATTTTAGTACATCATTAATTGTCAAAGCCTGTGTGACACAACTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
3UTR CCA 90 bp GAAAAGCTGAGTGAATTTCAAAGTTCTATTGGGAGATGGAGTTTGTaGTTCTTTCTGCCCCACCCAGGTCAAAGGCTCATGTCCAGAAAA +
Preference number: 1 (lower is better)
Translates to: EKLSEFQSSIGRWSL*FFLPHPGQRLMSRK
Trigger: TTTTCTGGACATGAGCCTTTGACCTGGGTGGGGCAGAAAGAACCACAAACTCCATCTCCCAATAGAACTTTGAAATTCACTCAGCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
3UTR TCA 90 bp AATGAATATAAAAACAAATCTATGAGTGCCCTCTTGTGGCAAGCCTaGCTATTACCACAACCCAAGTACCAGCCTCTCCCTGTCTATTTC +
Preference number: 1 (lower is better)
Translates to: NEYKNKSMSALLWQA*LLPQPKYQPLPVYF
Trigger: GAAATAGACAGGGAGAGGCTGGTACTTGGGTTGTGGTAATAGTCAGGCTTGCCACAAGAGGGCACTCATAGATTTGTTTTTATATTCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312994.9
3UTR GCA 90 bp TACTATTTGTTTTCAAGGATTTCTAGTTTAGATCCCAGAAATGCCTaGCTGAAGACAAGTGGGAATGAAGGGTCAGAAGAGCAAGATGCA +
Preference number: 1 (lower is better)
Translates to: YYLFSRISSLDPRNA*LKTSGNEGSEEQDA
Trigger: TGCATCTTGCTCTTCTGACCCTTCATTCCCACTTGTCTTCAGGCAGGCATTTCTGGGATCTAAACTAGAAATCCTTGAAAACAAATAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312994.9
3UTR-3UTR CCA 90 bp CCCTGTCTATTTCCACGGCTCTCCTCCACTCCTGGGCTCCGCATAACACAGCCAGTTGCTGTTTGGTCCTaGAAGTGTAAAGGAAAGCCT +
Preference number: 2 (lower is better)
Translates to: PCLFPRLSSTPGLRITQPVAVWS*KCKGKP
Trigger: AGGCTTTCCTTTACACTTCCAGGACCAAACAGCAAC...TGGCTGTGTTATGCGGAGCCCAGGAGTGGAGGAGAGCCGTGGAAATAGACAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312994.9
3UTR-3UTR TCA 90 bp TCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTAGGTTAGTATTCTaGGTTGTGTCACACAGGCTT +
Preference number: 2 (lower is better)
Translates to: SSAQGQQKRESKNKGEGLSRLVF*VVSHRL
Trigger: AAGCCTGTGTGACACAACTCAGAATACTAACCTAGA...GAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
3UTR-3UTR CCA 90 bp AAGCTAAAAATCTTGCAGTTCTGGGGCAGGAGGAGTGCAACAAGCAGGCAACAAACAGGACCGATATACTaGACAGCCCCTGTTAGAGAT +
Preference number: 2 (lower is better)
Translates to: KLKILQFWGRRSATSRQQTGPIY*TAPVRD
Trigger: ATCTCTAACAGGGGCTGTCCAGTATATCGGTCCTGT...TTGTTGCCTGCTTGTTGCACTCCTCCTGCCCCAGAACTGCAAGATTTTTAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
3UTR-3UTR GCA 90 bp TCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTTCAAACAATATCTTTaGTCCAGCAGAAGCATCCTG +
Preference number: 2 (lower is better)
Translates to: SSAQGQQKRESKNKGEGLFKQYL*SSRSIL
Trigger: CAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAA...GAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
3UTR-3UTR CCA 90 bp AAGCTAAAAATCTTGCAGTTCTGGGGCAGGAGGAGTGCAACAAGCAGGCAACAACACTTCTCCAGCCTTTaGAAGAACTTTTTCTCCCCT +
Preference number: 2 (lower is better)
Translates to: KLKILQFWGRRSATSRQQHFSSL*KNFFSP
Trigger: AGGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTG...TTGTTGCCTGCTTGTTGCACTCCTCCTGCCCCAGAACTGCAAGATTTTTAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
3UTR-3UTR CCA 90 bp AATGTATTAAGTAAGCTCAGTGTCCCAGGCTTCAGAGGAGACAGAGAAGTCCTCAAAATCTTGCAGTTCTaGGGCAGGAGGAGTGCAACA +
Preference number: 2 (lower is better)
Translates to: NVLSKLSVPGFRGDREVLKILQF*GRRSAT
Trigger: TGTTGCACTCCTCCTGCCCCAGAACTGCAAGATTTT...GAGGACTTCTCTGTCTCCTCTGAAGCCTGGGACACTGAGCTTACTTAATACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
3UTR CAA 90 bp AAGGAAAAGCTGAGTGAATTTCAAAGTTCTATTGGGAGATGGAGTTaGTGGTTCTTTCTGCCCCACCCAGGTCAAAGGCTCATGTCCAGA +
Preference number: 2 (lower is better)
Translates to: KEKLSEFQSSIGRWS*WFFLPHPGQRLMSR
Trigger: TCTGGACATGAGCCTTTGACCTGGGTGGGGCAGAAAGAACCACAAACTCCATCTCCCAATAGAACTTTGAAATTCACTCAGCTTTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
3UTR-3UTR TCA 90 bp AAGCTAAAAATCTTGCAGTTCTGGGGCAGGAGGAGTGCAACAAGCAGGCAACAATCTAGGTTAGTATTCTaGGTTGTGTCACACAGGCTT +
Preference number: 2 (lower is better)
Translates to: KLKILQFWGRRSATSRQQSRLVF*VVSHRL
Trigger: AAGCCTGTGTGACACAACTCAGAATACTAACCTAGA...TTGTTGCCTGCTTGTTGCACTCCTCCTGCCCCAGAACTGCAAGATTTTTAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
3UTR-3UTR CCA 90 bp GCTGTTTGGTCCTGGAAGTGTAAAGGAAAGCCTTTTCAAGTACGTGAAGTAGACACAGGACCGATATACTaGACAGCCCCTGTTAGAGAT +
Preference number: 2 (lower is better)
Translates to: AVWSWKCKGKPFQVREVDTGPIY*TAPVRD
Trigger: ATCTCTAACAGGGGCTGTCCAGTATATCGGTCCTGT...GTCTACTTCACGTACTTGAAAAGGCTTTCCTTTACACTTCCAGGACCAAACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
3UTR-3UTR TCA 90 bp AATGTATTAAGTAAGCTCAGTGTCCCAGGCTTCAGAGGAGACAGAGAAGTCCTCTCTAGGTTAGTATTCTaGGTTGTGTCACACAGGCTT +
Preference number: 2 (lower is better)
Translates to: NVLSKLSVPGFRGDREVLSRLVF*VVSHRL
Trigger: AAGCCTGTGTGACACAACTCAGAATACTAACCTAGA...GAGGACTTCTCTGTCTCCTCTGAAGCCTGGGACACTGAGCTTACTTAATACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
3UTR-3UTR TCA 90 bp GGACAGCCCCTGTTAGAGATAAACCGAGGCACTAGACAAGGAAGAAATGCATTATCTAGGTTAGTATTCTaGGTTGTGTCACACAGGCTT +
Preference number: 2 (lower is better)
Translates to: GQPLLEINRGTRQGRNALSRLVF*VVSHRL
Trigger: AAGCCTGTGTGACACAACTCAGAATACTAACCTAGA...TAATGCATTTCTTCCTTGTCTAGTGCCTCGGTTTATCTCTAACAGGGGCTGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
ENST00000409949.5
3UTR-3UTR TCA 90 bp AAGATAACATTACTCTCAGAAAGGGGTGAAGCTAAAAATCTTGCAGTTCTGGGGGTACGTGAAGTAGACTaGAGTGACCCAGATGGGATG +
Preference number: 2 (lower is better)
Translates to: KITLLSERGEAKNLAVLGVREVD*SDPDGM
Trigger: CATCCCATCTGGGTCACTTCAGTCTACTTCACGTAC...CCCCAGAACTGCAAGATTTTTAGCTTCACCCCTTTCTGAGAGTAATGTTATCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
3UTR-3UTR GCA 90 bp CCCCAGCAATGTGAATCCCCCTCTTCACAGTCCAATTCTAAGATTCCATTCTTAACCCACTACAGTGAATaGACATTCCTCAAAGTGGCT +
Preference number: 2 (lower is better)
Translates to: PQQCESPSSQSNSKIPFLTHYSE*TFLKVA
Trigger: AGCCACTTTGAGGAATGTGCATTCACTGTAGTGGGT...TAAGAATGGAATCTTAGAATTGGACTGTGAAGAGGGGGATTCACATTGCTGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312994.9
3UTR-3UTR CCA 90 bp TCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCAATGATGTACTAAAATaGGAAGAGGTGACTCTTCAA +
Preference number: 2 (lower is better)
Translates to: SSAQGQQKRESKNKGEGLNDVLK*EEVTLQ
Trigger: TTGAAGAGTCACCTCTTCCCATTTTAGTACATCATT...GAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
3UTR-3UTR CCA 90 bp AAGCTAAAAATCTTGCAGTTCTGGGGCAGGAGGAGTGCAACAAGCAGGCAACAAAGTTCTATTGGGAGATaGAGTTTGTGGTTCTTTCTG +
Preference number: 2 (lower is better)
Translates to: KLKILQFWGRRSATSRQQSSIGR*SLWFFL
Trigger: CAGAAAGAACCACAAACTCCATCTCCCAATAGAACT...TTGTTGCCTGCTTGTTGCACTCCTCCTGCCCCAGAACTGCAAGATTTTTAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
3UTR-3UTR CCA 90 bp CTTTGGAAGAACTTTTTCTCCCCTCCTAACAGGACCGATATACTGGACAGCCCCAATGATGTACTAAAATaGGAAGAGGTGACTCTTCAA +
Preference number: 2 (lower is better)
Translates to: LWKNFFSPPNRTDILDSPNDVLK*EEVTLQ
Trigger: TTGAAGAGTCACCTCTTCCCATTTTAGTACATCATT...GGGGCTGTCCAGTATATCGGTCCTGTTAGGAGGGGAGAAAAAGTTCTTCCAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
3UTR-3UTR CCA 90 bp AAGATAACATTACTCTCAGAAAGGGGTGAAGCTAAAAATCTTGCAGTTCTGGGGACAGGACCGATATACTaGACAGCCCCTGTTAGAGAT +
Preference number: 2 (lower is better)
Translates to: KITLLSERGEAKNLAVLGTGPIY*TAPVRD
Trigger: ATCTCTAACAGGGGCTGTCCAGTATATCGGTCCTGT...CCCCAGAACTGCAAGATTTTTAGCTTCACCCCTTTCTGAGAGTAATGTTATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
3UTR-3UTR CCA 90 bp AATGTATTAAGTAAGCTCAGTGTCCCAGGCTTCAGAGGAGACAGAGAAGTCCTCAGTTCTATTGGGAGATaGAGTTTGTGGTTCTTTCTG +
Preference number: 2 (lower is better)
Translates to: NVLSKLSVPGFRGDREVLSSIGR*SLWFFL
Trigger: CAGAAAGAACCACAAACTCCATCTCCCAATAGAACT...GAGGACTTCTCTGTCTCCTCTGAAGCCTGGGACACTGAGCTTACTTAATACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
3UTR-3UTR GCA 90 bp AGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGAGGTTCAAACAATATCTTTaGTCCAGCAGAAGCATCCTG +
Preference number: 2 (lower is better)
Translates to: RGRVKIKAKASLVHKNERFKQYL*SSRSIL
Trigger: CAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAA...CCTCTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
3UTR-3UTR GCA 90 bp GCTGTTTGGTCCTGGAAGTGTAAAGGAAAGCCTTTTCAAGTACGTGAAGTAGACTTCAAACAATATCTTTaGTCCAGCAGAAGCATCCTG +
Preference number: 2 (lower is better)
Translates to: AVWSWKCKGKPFQVREVDFKQYL*SSRSIL
Trigger: CAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAA...GTCTACTTCACGTACTTGAAAAGGCTTTCCTTTACACTTCCAGGACCAAACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
3UTR-3UTR CCA 90 bp AAGATAACATTACTCTCAGAAAGGGGTGAAGCTAAAAATCTTGCAGTTCTGGGGCACTTCTCCAGCCTTTaGAAGAACTTTTTCTCCCCT +
Preference number: 2 (lower is better)
Translates to: KITLLSERGEAKNLAVLGHFSSL*KNFFSP
Trigger: AGGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTG...CCCCAGAACTGCAAGATTTTTAGCTTCACCCCTTTCTGAGAGTAATGTTATCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
3UTR-3UTR TCA 90 bp CATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATTATCTAGGTTAGTATTCTaGGTTGTGTCACACAGGCTT +
Preference number: 2 (lower is better)
Translates to: HKLSFKQYLCSSRSILGLSRLVF*VVSHRL
Trigger: AAGCCTGTGTGACACAACTCAGAATACTAACCTAGA...TAATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
3UTR-3UTR GCA 90 bp AGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGTTCAAACAATATCTTTaGTCCAGCAGAAGCATCCTG +
Preference number: 2 (lower is better)
Translates to: RRGRVKIKAKASLVHKNEFKQYL*SSRSIL
Trigger: CAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAA...CTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
3UTR-3UTR CCA 90 bp TTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCTCCTAACAGGACCGATATTGACAAGTCACTTCTaGGAGAATTCTTCATTTTTC +
Preference number: 2 (lower is better)
Translates to: FTSPAFGRTFSPLLTGPILTSHF*ENSSFF
Trigger: GAAAAATGAAGAATTCTCCCAGAAGTGACTTGTCAA...TATCGGTCCTGTTAGGAGGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
3UTR-3UTR CCA 90 bp CCCCAGCAATGTGAATCCCCCTCTTCACAGTCCAATTCTAAGATTCCATTCTTAATTCCTCAAAGTGGCTaGTACTATTTGTTTTCAAGG +
Preference number: 2 (lower is better)
Translates to: PQQCESPSSQSNSKIPFLIPQSG*YYLFSR
Trigger: CCTTGAAAACAAATAGTACCAGCCACTTTGAGGAAT...TAAGAATGGAATCTTAGAATTGGACTGTGAAGAGGGGGATTCACATTGCTGGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000312994.9
3UTR-3UTR GCA 90 bp AAGATAACATTACTCTCAGAAAGGGGTGAAGCTAAAAATCTTGCAGTTCTGGGGTTCAAACAATATCTTTaGTCCAGCAGAAGCATCCTG +
Preference number: 2 (lower is better)
Translates to: KITLLSERGEAKNLAVLGFKQYL*SSRSIL
Trigger: CAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAA...CCCCAGAACTGCAAGATTTTTAGCTTCACCCCTTTCTGAGAGTAATGTTATCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
3UTR-3UTR CCA 90 bp AGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGAGGAATGATGTACTAAAATaGGAAGAGGTGACTCTTCAA +
Preference number: 2 (lower is better)
Translates to: RGRVKIKAKASLVHKNERNDVLK*EEVTLQ
Trigger: TTGAAGAGTCACCTCTTCCCATTTTAGTACATCATT...CCTCTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
3UTR-3UTR CCA 90 bp GCTGTTTGGTCCTGGAAGTGTAAAGGAAAGCCTTTTCAAGTACGTGAAGTAGACTTGACAAGTCACTTCTaGGAGAATTCTTCATTTTTC +
Preference number: 2 (lower is better)
Translates to: AVWSWKCKGKPFQVREVDLTSHF*ENSSFF
Trigger: GAAAAATGAAGAATTCTCCCAGAAGTGACTTGTCAA...GTCTACTTCACGTACTTGAAAAGGCTTTCCTTTACACTTCCAGGACCAAACAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
3UTR-3UTR CCA 90 bp AGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGAATGATGTACTAAAATaGGAAGAGGTGACTCTTCAA +
Preference number: 2 (lower is better)
Translates to: RRGRVKIKAKASLVHKNENDVLK*EEVTLQ
Trigger: TTGAAGAGTCACCTCTTCCCATTTTAGTACATCATT...CTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
3UTR-3UTR CCA 90 bp ACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATAATGATGTACTAAAATaGGAAGAGGTGACTCTTCAA +
Preference number: 2 (lower is better)
Translates to: TINSPSNNIFAPAEASWDNDVLK*EEVTLQ
Trigger: TTGAAGAGTCACCTCTTCCCATTTTAGTACATCATT...ATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
3UTR TCA 72 bp GATGCAGGATGTGCACGTGGGTTCATGGGCTGCTACTaGTGGCCGATGGTGACTGTGTCTGGTATATCCATG +
Preference number: 3 (lower is better)
Translates to: DAGCARGFMGCY*WPMVTVSGISM
Trigger: CATGGATATACCAGACACAGTCACCATCGGCCATCAGTAGCAGCCCATGAACCCACGTGCACATCCTGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312994.9
3UTR-3UTR CAA 90 bp CTTTGGAAGAACTTTTTCTCCCCTCCTAACAGGACCGATATACTGGACAGCCCCGGTGACTCTTCAACCTaGGCTCCAGCTTCCCACTTG +
Preference number: 3 (lower is better)
Translates to: LWKNFFSPPNRTDILDSPGDSST*APASHL
Trigger: CAAGTGGGAAGCTGGAGCCAAGGTTGAAGAGTCACC...GGGGCTGTCCAGTATATCGGTCCTGTTAGGAGGGGAGAAAAAGTTCTTCCAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
3UTR TCA 72 bp AGATCCCAGAAATGCCTGCCTGAAGACAAGTGGGAATaGAGGGTCAGAAGAGCAAGATGCAGGATGTGCACG +
Preference number: 3 (lower is better)
Translates to: RSQKCLPEDKWE*RVRRARCRMCT
Trigger: CGTGCACATCCTGCATCTTGCTCTTCTGACCCTTCATTCCCACTTGTCTTCAGGCAGGCATTTCTGGGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312994.9
3UTR TCA 72 bp ACACTGTCCTCTCACTGCTACTCCTATGAAGCCCAGTaGCTATGCTGGGACACTGGAGCTAAAGGGTCAAAG +
Preference number: 3 (lower is better)
Translates to: TLSSHCYSYEAQ*LCWDTGAKGSK
Trigger: CTTTGACCCTTTAGCTCCAGTGTCCCAGCATAGTCACTGGGCTTCATAGGAGTAGCAGTGAGAGGACAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312994.9
3UTR-3UTR CAA 90 bp GGACAGCCCCTGTTAGAGATAAACCGAGGCACTAGACAAGGAAGAAATGCATTAGGTGACTCTTCAACCTaGGCTCCAGCTTCCCACTTG +
Preference number: 3 (lower is better)
Translates to: GQPLLEINRGTRQGRNALGDSST*APASHL
Trigger: CAAGTGGGAAGCTGGAGCCAAGGTTGAAGAGTCACC...TAATGCATTTCTTCCTTGTCTAGTGCCTCGGTTTATCTCTAACAGGGGCTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
ENST00000409949.5
3UTR CCA 72 bp CTCATGTCCAGAAAAGGATTTCTCCCAGTGATAGGGTaGAAGTGTGTGGCAGGAAGTTGCTGTTTGGTCCTG +
Preference number: 3 (lower is better)
Translates to: LMSRKGFLPVIG*KCVAGSCCLVL
Trigger: CAGGACCAAACAGCAACTTCCTGCCACACACTTCCACCCTATCACTGGGAGAAATCCTTTTCTGGACATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
3UTR-3UTR CAA 90 bp AGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGAGGGGTGACTCTTCAACCTaGGCTCCAGCTTCCCACTTG +
Preference number: 3 (lower is better)
Translates to: RGRVKIKAKASLVHKNERGDSST*APASHL
Trigger: CAAGTGGGAAGCTGGAGCCAAGGTTGAAGAGTCACC...CCTCTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
3UTR-3UTR CAA 90 bp AAGCTAAAAATCTTGCAGTTCTGGGGCAGGAGGAGTGCAACAAGCAGGCAACAAAGGCGAAGGCCTCTCTaGTCCACAAAAATGAGAGGA +
Preference number: 3 (lower is better)
Translates to: KLKILQFWGRRSATSRQQRRRPL*STKMRG
Trigger: TCCTCTCATTTTTGTGGACAAGAGAGGCCTTCGCCT...TTGTTGCCTGCTTGTTGCACTCCTCCTGCCCCAGAACTGCAAGATTTTTAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
3UTR TCA 72 bp GCCAGGAGGCAGAGACCCCATAATAACCCACTACAGTaGATGCACATTCCTCAAAGTGGCTGGTACTATTTG +
Preference number: 3 (lower is better)
Translates to: ARRQRPHNNPLQ*MHIPQSGWYYL
Trigger: CAAATAGTACCAGCCACTTTGAGGAATGTGCATTCACTGTAGTGGGTTATTATGGGGTCTCTGCCTCCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312994.9
3UTR GCA 72 bp TTGTGTGACGCAGTCTGGCTTTTTCCTCTACTTTGCTaGTGGCTCTATTTTACTGCGCCTCACAGAAAGCTC +
Preference number: 3 (lower is better)
Translates to: LCDAVWLFPLLC*WLYFTAPHRKL
Trigger: GAGCTTTCTGTGAGGCGCAGTAAAATAGAGCCAGCAGCAAAGTAGAGGAAAAAGCCAGACTGCGTCACACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312994.9
3UTR-3UTR CAA 90 bp AATGTATTAAGTAAGCTCAGTGTCCCAGGCTTCAGAGGAGACAGAGAAGTCCTCGTGAAGCTAAAAATCTaGCAGTTCTGGGGCAGGAGG +
Preference number: 3 (lower is better)
Translates to: NVLSKLSVPGFRGDREVLVKLKI*QFWGRR
Trigger: CCTCCTGCCCCAGAACTGCAAGATTTTTAGCTTCAC...GAGGACTTCTCTGTCTCCTCTGAAGCCTGGGACACTGAGCTTACTTAATACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
3UTR-3UTR CAA 90 bp AGAATTCTTCATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATGGTGACTCTTCAACCTaGGCTCCAGCTTCCCACTTG +
Preference number: 3 (lower is better)
Translates to: RILHFSSAQGQQKRESKNGDSST*APASHL
Trigger: CAAGTGGGAAGCTGGAGCCAAGGTTGAAGAGTCACC...ATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAATGAAGAATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
3UTR-3UTR CAA 90 bp GCTGTTTGGTCCTGGAAGTGTAAAGGAAAGCCTTTTCAAGTACGTGAAGTAGACAGGCGAAGGCCTCTCTaGTCCACAAAAATGAGAGGA +
Preference number: 3 (lower is better)
Translates to: AVWSWKCKGKPFQVREVDRRRPL*STKMRG
Trigger: TCCTCTCATTTTTGTGGACAAGAGAGGCCTTCGCCT...GTCTACTTCACGTACTTGAAAAGGCTTTCCTTTACACTTCCAGGACCAAACAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
3UTR TCA 72 bp ACTGAAGTGACCCAGATGGGATGGATCCCAACCACATaGGTTACGGGAGAGCATGAAGCCAAAGAAATGATA +
Preference number: 3 (lower is better)
Translates to: TEVTQMGWIPTT*VTGEHEAKEMI
Trigger: TATCATTTCTTTGGCTTCATGCTCTCCCGTAACTCATGTGGTTGGGATCCATCCCATCTGGGTCACTTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
3UTR CCA 72 bp GGTGGAAGTGTGTGGCAGGAAGTTGCTGTTTGGTCCTaGAAGTGTAAAGGAAAGCCTTTTCAAGTACGTGAA +
Preference number: 3 (lower is better)
Translates to: GGSVWQEVAVWS*KCKGKPFQVRE
Trigger: TTCACGTACTTGAAAAGGCTTTCCTTTACACTTCCAGGACCAAACAGCAACTTCCTGCCACACACTTCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
3UTR CCA 72 bp CTGGCTCTATTTTACTGCGCCTCACAGAAAGCTCCATaGGAAAACCCTTTCCCTAGCACCTTAAATGACCTT +
Preference number: 3 (lower is better)
Translates to: LALFYCASQKAP*ENPFPSTLNDL
Trigger: AAGGTCATTTAAGGTGCTAGGGAAAGGGTTTTCCCATGGAGCTTTCTGTGAGGCGCAGTAAAATAGAGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312994.9
3UTR GCA 72 bp GGAGGCAGAGACCCCATAATAACCCACTACAGTGAATaGACATTCCTCAAAGTGGCTGGTACTATTTGTTTT +
Preference number: 3 (lower is better)
Translates to: GGRDPIITHYSE*TFLKVAGTICF
Trigger: AAAACAAATAGTACCAGCCACTTTGAGGAATGTGCATTCACTGTAGTGGGTTATTATGGGGTCTCTGCCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312994.9
3UTR-3UTR CAA 90 bp ATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGCTTCAAACAATATCTTaGCTCCAGCAGAAGCATCCT +
Preference number: 3 (lower is better)
Translates to: IFPLHRDSRRGRVKIKAKLQTIS*LQQKHP
Trigger: AGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAG...CTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
3UTR GCA 72 bp TTTTCAAGGATTTCTAGTTTAGATCCCAGAAATGCCTaGCTGAAGACAAGTGGGAATGAAGGGTCAGAAGAG +
Preference number: 3 (lower is better)
Translates to: FSRISSLDPRNA*LKTSGNEGSEE
Trigger: CTCTTCTGACCCTTCATTCCCACTTGTCTTCAGGCAGGCATTTCTGGGATCTAAACTAGAAATCCTTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312994.9
3UTR CCA 72 bp GTCACACAGGCTTTGACAATTAATGATGTACTAAAATaGGAAGAGGTGACTCTTCAACCTTGGCTCCAGCTT +
Preference number: 3 (lower is better)
Translates to: VTQALTINDVLK*EEVTLQPWLQL
Trigger: AAGCTGGAGCCAAGGTTGAAGAGTCACCTCTTCCCATTTTAGTACATCATTAATTGTCAAAGCCTGTGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
3UTR-3UTR CAA 90 bp GCTGTTTGGTCCTGGAAGTGTAAAGGAAAGCCTTTTCAAGTACGTGAAGTAGACAATAAATTTGACTCCTaGTTCACTTCTCCAGCCTTT +
Preference number: 3 (lower is better)
Translates to: AVWSWKCKGKPFQVREVDNKFDS*FTSPAF
Trigger: AAAGGCTGGAGAAGTGAACAAGGAGTCAAATTTATT...GTCTACTTCACGTACTTGAAAAGGCTTTCCTTTACACTTCCAGGACCAAACAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
3UTR TCA 72 bp AAGCAGGCAACAAACAGCATGAAAGGAAAAGCTGAGTaGATTTCAAAGTTCTATTGGGAGATGGAGTTTGTG +
Preference number: 3 (lower is better)
Translates to: KQATNSMKGKAE*ISKFYWEMEFV
Trigger: CACAAACTCCATCTCCCAATAGAACTTTGAAATTCACTCAGCTTTTCCTTTCATGCTGTTTGTTGCCTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
3UTR TCA 72 bp GACATTTGCCATAAAATAAGTCTACCCTCAAATCTCTaGTTTAAGACGACAATTGTCAGTCTTAGGAAAAGC +
Preference number: 3 (lower is better)
Translates to: DICHKISLPSNL*FKTTIVSLRKS
Trigger: GCTTTTCCTAAGACTGACAATTGTCGTCTTAAATCAGAGATTTGAGGGTAGACTTATTTTATGGCAAATGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR GCA 90 bp CCCTGTCTATTTCCACGGCTCTCCTCCACTCCTGGGCTCCGCATAACACAGCCACGAGGAGCTACCAGGTaGCGCGGGCGGGGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: PCLFPRLSSTPGLRITQPRGATR*RGRGLL
Trigger: AAGGAGGCCCCGCCCGCGGCACCTGGTAGCTCCTCG...TGGCTGTGTTATGCGGAGCCCAGGAGTGGAGGAGAGCCGTGGAAATAGACAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR TCA 90 bp CCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTGGCCGCGGGCAGGGGTaGGGCCCTCCTTGCGCACCT +
Preference number: 4 (lower is better)
Translates to: PLHRDSRRGRVKIKAKASGRGQG*GPPCAP
Trigger: AGGTGCGCAAGGAGGGCCTCACCCCTGCCCGCGGCC...AGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312994.9
ENST00000409242.5
ENST00000409949.5
CDS-3UTR CCA 90 bp CCCTGTCTATTTCCACGGCTCTCCTCCACTCCTGGGCTCCGCATAACACAGCCACTGGGGTCTCTCCCTTaGTGGTTGCCTGGCACCATC +
Preference number: 4 (lower is better)
Translates to: PCLFPRLSSTPGLRITQPLGSLP*WLPGTI
Trigger: GATGGTGCCAGGCAACCACCAAGGGAGAGACCCCAG...TGGCTGTGTTATGCGGAGCCCAGGAGTGGAGGAGAGCCGTGGAAATAGACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR TCA 90 bp ATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGGCCGCGGGCAGGGGTaGGGCCCTCCTTGCGCACCT +
Preference number: 4 (lower is better)
Translates to: IFPLHRDSRRGRVKIKAKGRGQG*GPPCAP
Trigger: AGGTGCGCAAGGAGGGCCTCACCCCTGCCCGCGGCC...CTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312994.9
ENST00000409242.5
ENST00000409949.5
CDS-3UTR TCA 90 bp AGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGAGGGGCCGCGGGCAGGGGTaGGGCCCTCCTTGCGCACCT +
Preference number: 4 (lower is better)
Translates to: RGRVKIKAKASLVHKNERGRGQG*GPPCAP
Trigger: AGGTGCGCAAGGAGGGCCTCACCCCTGCCCGCGGCC...CCTCTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000312994.9
ENST00000409242.5
ENST00000409949.5
CDS-3UTR TCA 90 bp TTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCTCCTAACAGGACCGATAGCAGGCTCTCCGCGTTaGGCAGGGCCCTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: FTSPAFGRTFSPLLTGPIAGSPR*AGPWPQ
Trigger: CTGGGGCCAGGGCCCTGCTCAACGCGGAGAGCCTGC...TATCGGTCCTGTTAGGAGGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR TCA 90 bp TCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCGAGTCCAGGAAGTGCTaGCGCCAGCGGCTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SSAQGQQKRESKNKGEGLESRKC*RQRLSS
Trigger: GCTGGAGAGCCGCTGGCGTCAGCACTTCCTGGACTC...GAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp TCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCCAGCGGCTCTCCAGCTaGATGAGGGAGCGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: SSAQGQQKRESKNKGEGLQRLSS*MRERRP
Trigger: TGGCCTGCGCTCCCTCATGCAGCTGGAGAGCCGCTG...GAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp ATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGTGCGCACCTGGGTGCTaGACCGCCCCGCCGTGTGCG +
Preference number: 4 (lower is better)
Translates to: IFPLHRDSRRGRVKIKAKCAPGC*TAPPCA
Trigger: CGCACACGGCGGGGCGGTTCAGCACCCAGGTGCGCA...CTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000312994.9
ENST00000409949.5
CDS-3UTR TCA 90 bp CCCTGTCTATTTCCACGGCTCTCCTCCACTCCTGGGCTCCGCATAACACAGCCATTACCTGGTCCTCTGTaGGAGTCTCAGCATCCCAGT +
Preference number: 4 (lower is better)
Translates to: PCLFPRLSSTPGLRITQPLPGPL*ESQHPS
Trigger: ACTGGGATGCTGAGACTCTCACAGAGGACCAGGTAA...TGGCTGTGTTATGCGGAGCCCAGGAGTGGAGGAGAGCCGTGGAAATAGACAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR TCA 90 bp CCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTAGGCCACCCTGGCTGTaGCACTGCACCACCTTCAGC +
Preference number: 4 (lower is better)
Translates to: PLHRDSRRGRVKIKAKASRPPWL*HCTTFS
Trigger: GCTGAAGGTGGTGCAGTGTCACAGCCAGGGTGGCCT...AGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp TCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCCACTGCTGGGGCAGGTaGTTGGGCTGCATGGAGTCC +
Preference number: 4 (lower is better)
Translates to: SSAQGQQKRESKNKGEGLHCWGR*LGCMES
Trigger: GGACTCCATGCAGCCCAAGCACCTGCCCCAGCAGTG...GAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp CCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCACTGCTGGGGCAGGTaGTTGGGCTGCATGGAGTCC +
Preference number: 4 (lower is better)
Translates to: PLHRDSRRGRVKIKAKASHCWGR*LGCMES
Trigger: GGACTCCATGCAGCCCAAGCACCTGCCCCAGCAGTG...AGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp TCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTGGTCCACTGACCACTaGTGGGGCAGGTGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: SSAQGQQKRESKNKGEGLWSTDH*WGRCLG
Trigger: GCCCAAGCACCTGCCCCAGCAGTGGTCAGTGGACCA...GAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp CCCTGTCTATTTCCACGGCTCTCCTCCACTCCTGGGCTCCGCATAACACAGCCAGGTCCTTCATCTCGATaGGGAAGTGCTTCCGGTACT +
Preference number: 4 (lower is better)
Translates to: PCLFPRLSSTPGLRITQPGPSSR*GSASGT
Trigger: AGTACCGGAAGCACTTCCCCATCGAGATGAAGGACC...TGGCTGTGTTATGCGGAGCCCAGGAGTGGAGGAGAGCCGTGGAAATAGACAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR CCA 90 bp CCCTGTCTATTTCCACGGCTCTCCTCCACTCCTGGGCTCCGCATAACACAGCCATTCTGGTCTCCAGGCTaGCAGCCTCTTGAAGCATCT +
Preference number: 4 (lower is better)
Translates to: PCLFPRLSSTPGLRITQPFWSPG*QPLEAS
Trigger: AGATGCTTCAAGAGGCTGCCAGCCTGGAGACCAGAA...TGGCTGTGTTATGCGGAGCCCAGGAGTGGAGGAGAGCCGTGGAAATAGACAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR CCA 90 bp CCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTGCTGGGGCAGGTGCTTaGGCTGCATGGAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PLHRDSRRGRVKIKAKASAGAGA*AAWSPG
Trigger: TCCTGGACTCCATGCAGCCCAAGCACCTGCCCCAGC...AGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp AGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGTGCGCACCTGGGTGCTaGACCGCCCCGCCGTGTGCG +
Preference number: 4 (lower is better)
Translates to: RRGRVKIKAKASLVHKNECAPGC*TAPPCA
Trigger: CGCACACGGCGGGGCGGTTCAGCACCCAGGTGCGCA...CTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000312994.9
ENST00000409949.5
CDS-3UTR TCA 90 bp TCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCGGCCTCCTTTTTAGCTaGCTGGGACACGCAGCCTCG +
Preference number: 4 (lower is better)
Translates to: SSAQGQQKRESKNKGEGLGLLFS*LGHAAS
Trigger: CGAGGCTGCGTGTCCCAGTCAGCTAAAAAGGAGGCC...GAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312994.9
ENST00000409242.5
ENST00000409949.5
CDS-3UTR TCA 90 bp TCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCGCACTGGAGTGCAGCTaGTCATCTTCTGGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: SSAQGQQKRESKNKGEGLALECS*SSSGGG
Trigger: GCCCCCTCCAGAAGATGATCAGCTGCACTCCAGTGC...GAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409949.5
CDS-3UTR TCA 90 bp AGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGGCAGGCTCTCCGCGTTaGGCAGGGCCCTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: RRGRVKIKAKASLVHKNEAGSPR*AGPWPQ
Trigger: CTGGGGCCAGGGCCCTGCTCAACGCGGAGAGCCTGC...CTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp TCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCATGGTTGTGGTCCACTaGCCACTGCTGGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: SSAQGQQKRESKNKGEGLMVVVH*PLLGQV
Trigger: CACCTGCCCCAGCAGTGGTCAGTGGACCACAACCAT...GAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp CCCTGTCTATTTCCACGGCTCTCCTCCACTCCTGGGCTCCGCATAACACAGCCATCACTGCTACTCCTATaGAGCCCAGTGACTATGCTG +
Preference number: 4 (lower is better)
Translates to: PCLFPRLSSTPGLRITQPSLLLL*SPVTML
Trigger: CAGCATAGTCACTGGGCTTCATAGGAGTAGCAGTGA...TGGCTGTGTTATGCGGAGCCCAGGAGTGGAGGAGAGCCGTGGAAATAGACAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR GCA 90 bp CCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTGAAAACAGCAGCTGTTaGCGCGTCGAACCCGCAGCG +
Preference number: 4 (lower is better)
Translates to: PLHRDSRRGRVKIKAKASENSSC*RVEPAA
Trigger: CGCTGCGGGTTCGACGCGGCAACAGCTGCTGTTTTC...AGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312994.9
ENST00000409242.5
ENST00000409949.5
CDS-3UTR GCA 90 bp TCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCGGCAGGTGCTTGGGCTaGATGGAGTCCAGGAAGTGC +
Preference number: 4 (lower is better)
Translates to: SSAQGQQKRESKNKGEGLGRCLG*MESRKC
Trigger: GCACTTCCTGGACTCCATGCAGCCCAAGCACCTGCC...GAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp AGAATTCTTCATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATGCAGGCTCTCCGCGTTaGGCAGGGCCCTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: RILHFSSAQGQQKRESKNAGSPR*AGPWPQ
Trigger: CTGGGGCCAGGGCCCTGCTCAACGCGGAGAGCCTGC...ATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAATGAAGAATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp CCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTAGGCTGGCAGCCTCTTaGAGCATCTCCTCTGTGACC +
Preference number: 4 (lower is better)
Translates to: PLHRDSRRGRVKIKAKASRLAAS*SISSVT
Trigger: GGTCACAGAGGAGATGCTTCAAGAGGCTGCCAGCCT...AGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp GGACAGCCCCTGTTAGAGATAAACCGAGGCACTAGACAAGGAAGAAATGCATTAGCCCCAGAACGCACCTaGCGGCGCTCAGGATCTTCC +
Preference number: 4 (lower is better)
Translates to: GQPLLEINRGTRQGRNALAPERT*RRSGSS
Trigger: GGAAGATCCTGAGCGCCGGCAGGTGCGTTCTGGGGC...TAATGCATTTCTTCCTTGTCTAGTGCCTCGGTTTATCTCTAACAGGGGCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp AATGTATTAAGTAAGCTCAGTGTCCCAGGCTTCAGAGGAGACAGAGAAGTCCTCCAGCGGCTCTCCAGCTaGATGAGGGAGCGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: NVLSKLSVPGFRGDREVLQRLSS*MRERRP
Trigger: TGGCCTGCGCTCCCTCATGCAGCTGGAGAGCCGCTG...GAGGACTTCTCTGTCTCCTCTGAAGCCTGGGACACTGAGCTTACTTAATACATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR GCA 90 bp ATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGAAGACCTGGAACCTGTaGGGCCGCCTGCGCGCACCC +
Preference number: 4 (lower is better)
Translates to: IFPLHRDSRRGRVKIKAKKTWNL*GRLRAP
Trigger: GGGTGCGCGCAGGCGGCCGCACAGGTTCCAGGTCTT...CTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409018.7
CDS-3UTR CCA 90 bp ACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATCCCTCCTTGCGCACCTaGGTGCTGAACCGCCCCGCC +
Preference number: 4 (lower is better)
Translates to: TINSPSNNIFAPAEASWDPSLRT*VLNRPA
Trigger: GGCGGGGCGGTTCAGCACCCAGGTGCGCAAGGAGGG...ATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312994.9
ENST00000409949.5
CDS-3UTR CCA 90 bp AGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGCCCTCCTTGCGCACCTaGGTGCTGAACCGCCCCGCC +
Preference number: 4 (lower is better)
Translates to: RRGRVKIKAKASLVHKNEPSLRT*VLNRPA
Trigger: GGCGGGGCGGTTCAGCACCCAGGTGCGCAAGGAGGG...CTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000312994.9
ENST00000409949.5
CDS-3UTR CCA 90 bp TCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCGGTGCTTGGGCTGCATaGAGTCCAGGAAGTGCTGAC +
Preference number: 4 (lower is better)
Translates to: SSAQGQQKRESKNKGEGLGAWAA*SPGSAD
Trigger: GTCAGCACTTCCTGGACTCCATGCAGCCCAAGCACC...GAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp CCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTGGTGCTTGGGCTGCATaGAGTCCAGGAAGTGCTGAC +
Preference number: 4 (lower is better)
Translates to: PLHRDSRRGRVKIKAKASGAWAA*SPGSAD
Trigger: GTCAGCACTTCCTGGACTCCATGCAGCCCAAGCACC...AGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp CCCTGTCTATTTCCACGGCTCTCCTCCACTCCTGGGCTCCGCATAACACAGCCACCCACTTGTCCTAACTaGGAGGAAAGCAGCTATCAA +
Preference number: 4 (lower is better)
Translates to: PCLFPRLSSTPGLRITQPPTCPN*EESSYQ
Trigger: TTGATAGCTGCTTTCCTCCCAGTTAGGACAAGTGGG...TGGCTGTGTTATGCGGAGCCCAGGAGTGGAGGAGAGCCGTGGAAATAGACAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR CCA 90 bp TTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCTCCTAACAGGACCGATATCTGCTGTCTCGGACTaGGCCGCACACCTGCAGCGG +
Preference number: 4 (lower is better)
Translates to: FTSPAFGRTFSPLLTGPISAVSD*AAHLQR
Trigger: CCGCTGCAGGTGTGCGGCCCAGTCCGAGACAGCAGA...TATCGGTCCTGTTAGGAGGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409014.5
ENST00000409018.7
CDS-3UTR TCA 90 bp CTTTGGAAGAACTTTTTCTCCCCTCCTAACAGGACCGATATACTGGACAGCCCCAGGCTGGCAGCCTCTTaGAGCATCTCCTCTGTGACC +
Preference number: 4 (lower is better)
Translates to: LWKNFFSPPNRTDILDSPRLAAS*SISSVT
Trigger: GGTCACAGAGGAGATGCTTCAAGAGGCTGCCAGCCT...GGGGCTGTCCAGTATATCGGTCCTGTTAGGAGGGGAGAAAAAGTTCTTCCAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR TCA 90 bp TTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCTCCTAACAGGACCGATAAGGCCACCCTGGCTGTaGCACTGCACCACCTTCAGC +
Preference number: 4 (lower is better)
Translates to: FTSPAFGRTFSPLLTGPIRPPWL*HCTTFS
Trigger: GCTGAAGGTGGTGCAGTGTCACAGCCAGGGTGGCCT...TATCGGTCCTGTTAGGAGGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR TCA 90 bp AGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGAGGGAGTCCAGGAAGTGCTaGCGCCAGCGGCTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RGRVKIKAKASLVHKNERESRKC*RQRLSS
Trigger: GCTGGAGAGCCGCTGGCGTCAGCACTTCCTGGACTC...CCTCTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp CCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTTTCCGGAGCAGCTTCTaGTGGTTGTGGTCCACTGAC +
Preference number: 4 (lower is better)
Translates to: PLHRDSRRGRVKIKAKASFRSSF*WLWSTD
Trigger: GTCAGTGGACCACAACCATCAGAAGCTGCTCCGGAA...AGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp CCCTGTCTATTTCCACGGCTCTCCTCCACTCCTGGGCTCCGCATAACACAGCCAGTCTTGCAAATTCGATaGAGCACAGAATACAGGGGA +
Preference number: 4 (lower is better)
Translates to: PCLFPRLSSTPGLRITQPVLQIR*STEYRG
Trigger: TCCCCTGTATTCTGTGCTTCATCGAATTTGCAAGAC...TGGCTGTGTTATGCGGAGCCCAGGAGTGGAGGAGAGCCGTGGAAATAGACAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR TCA 90 bp TCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTTCATGGGCTGCTACTaGTGGCCGATGGTGACTGTG +
Preference number: 4 (lower is better)
Translates to: SSAQGQQKRESKNKGEGLFMGCY*WPMVTV
Trigger: CACAGTCACCATCGGCCATCAGTAGCAGCCCATGAA...GAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR GCA 90 bp CAAAACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGCGAGGAGCTACCAGGTaGCGCGGGCGGGGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: QNHKLSFKQYLCSSRSILRGATR*RGRGLL
Trigger: AAGGAGGCCCCGCCCGCGGCACCTGGTAGCTCCTCG...CAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312994.9
ENST00000409242.5
ENST00000409949.5
CDS-3UTR GCA 90 bp GCTGTTTGGTCCTGGAAGTGTAAAGGAAAGCCTTTTCAAGTACGTGAAGTAGACCAGCGGCTCTCCAGCTaGATGAGGGAGCGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: AVWSWKCKGKPFQVREVDQRLSS*MRERRP
Trigger: TGGCCTGCGCTCCCTCATGCAGCTGGAGAGCCGCTG...GTCTACTTCACGTACTTGAAAAGGCTTTCCTTTACACTTCCAGGACCAAACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR GCA 90 bp GGACAGCCCCTGTTAGAGATAAACCGAGGCACTAGACAAGGAAGAAATGCATTACACTGCTGGGGCAGGTaGTTGGGCTGCATGGAGTCC +
Preference number: 4 (lower is better)
Translates to: GQPLLEINRGTRQGRNALHCWGR*LGCMES
Trigger: GGACTCCATGCAGCCCAAGCACCTGCCCCAGCAGTG...TAATGCATTTCTTCCTTGTCTAGTGCCTCGGTTTATCTCTAACAGGGGCTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp TCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCCCCTTGGTGGTTGCCTaGCACCATCCCATCCATCTT +
Preference number: 4 (lower is better)
Translates to: SSAQGQQKRESKNKGEGLPLVVA*HHPIHL
Trigger: AAGATGGATGGGATGGTGCCAGGCAACCACCAAGGG...GAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp CCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCCCTTGGTGGTTGCCTaGCACCATCCCATCCATCTT +
Preference number: 4 (lower is better)
Translates to: PLHRDSRRGRVKIKAKASPLVVA*HHPIHL
Trigger: AAGATGGATGGGATGGTGCCAGGCAACCACCAAGGG...AGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp GGACAGCCCCTGTTAGAGATAAACCGAGGCACTAGACAAGGAAGAAATGCATTATCCACTGACCACTGCTaGGGCAGGTGCTTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GQPLLEINRGTRQGRNALSTDHC*GRCLGC
Trigger: GCAGCCCAAGCACCTGCCCCAGCAGTGGTCAGTGGA...TAATGCATTTCTTCCTTGTCTAGTGCCTCGGTTTATCTCTAACAGGGGCTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp CCCTGTCTATTTCCACGGCTCTCCTCCACTCCTGGGCTCCGCATAACACAGCCACACTTCTCCAGCCTTTaGAAGAACTTTTTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: PCLFPRLSSTPGLRITQPHFSSL*KNFFSP
Trigger: AGGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTG...TGGCTGTGTTATGCGGAGCCCAGGAGTGGAGGAGAGCCGTGGAAATAGACAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR TCA 90 bp TTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCTCCTAACAGGACCGATAGCACTGGAGTGCAGCTaGTCATCTTCTGGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: FTSPAFGRTFSPLLTGPIALECS*SSSGGG
Trigger: GCCCCCTCCAGAAGATGATCAGCTGCACTCCAGTGC...TATCGGTCCTGTTAGGAGGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
CDS-3UTR TCA 90 bp GGACAGCCCCTGTTAGAGATAAACCGAGGCACTAGACAAGGAAGAAATGCATTAGCACTGGAGTGCAGCTaGTCATCTTCTGGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: GQPLLEINRGTRQGRNALALECS*SSSGGG
Trigger: GCCCCCTCCAGAAGATGATCAGCTGCACTCCAGTGC...TAATGCATTTCTTCCTTGTCTAGTGCCTCGGTTTATCTCTAACAGGGGCTGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409949.5
CDS-3UTR TCA 90 bp CCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTTTACCTGGTCCTCTGTaGGAGTCTCAGCATCCCAGT +
Preference number: 4 (lower is better)
Translates to: PLHRDSRRGRVKIKAKASLPGPL*ESQHPS
Trigger: ACTGGGATGCTGAGACTCTCACAGAGGACCAGGTAA...AGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp TCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTTACCTGGTCCTCTGTaGGAGTCTCAGCATCCCAGT +
Preference number: 4 (lower is better)
Translates to: SSAQGQQKRESKNKGEGLLPGPL*ESQHPS
Trigger: ACTGGGATGCTGAGACTCTCACAGAGGACCAGGTAA...GAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp CCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTAAGAAAGAGAGCCACTaGAATCTGGGCATCCCTGGC +
Preference number: 4 (lower is better)
Translates to: PLHRDSRRGRVKIKAKASKKESH*NLGIPG
Trigger: GCCAGGGATGCCCAGATTTCAGTGGCTCTCTTTCTT...AGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp ATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGAGCTCCTCCTTTCGCTaGGTAGGCAGGCTCTCCGCG +
Preference number: 4 (lower is better)
Translates to: IFPLHRDSRRGRVKIKAKSSSFR*VGRLSA
Trigger: CGCGGAGAGCCTGCCTACTCAGCGAAAGGAGGAGCT...CTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp AAGCTAAAAATCTTGCAGTTCTGGGGCAGGAGGAGTGCAACAAGCAGGCAACAAAGGCTGGCAGCCTCTTaGAGCATCTCCTCTGTGACC +
Preference number: 4 (lower is better)
Translates to: KLKILQFWGRRSATSRQQRLAAS*SISSVT
Trigger: GGTCACAGAGGAGATGCTTCAAGAGGCTGCCAGCCT...TTGTTGCCTGCTTGTTGCACTCCTCCTGCCCCAGAACTGCAAGATTTTTAGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR TCA 90 bp AGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGAGGAGGCCACCCTGGCTGTaGCACTGCACCACCTTCAGC +
Preference number: 4 (lower is better)
Translates to: RGRVKIKAKASLVHKNERRPPWL*HCTTFS
Trigger: GCTGAAGGTGGTGCAGTGTCACAGCCAGGGTGGCCT...CCTCTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp AGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGGAGTCCAGGAAGTGCTaGCGCCAGCGGCTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RRGRVKIKAKASLVHKNEESRKC*RQRLSS
Trigger: GCTGGAGAGCCGCTGGCGTCAGCACTTCCTGGACTC...CTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp GGACAGCCCCTGTTAGAGATAAACCGAGGCACTAGACAAGGAAGAAATGCATTAATGGTTGTGGTCCACTaGCCACTGCTGGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: GQPLLEINRGTRQGRNALMVVVH*PLLGQV
Trigger: CACCTGCCCCAGCAGTGGTCAGTGGACCACAACCAT...TAATGCATTTCTTCCTTGTCTAGTGCCTCGGTTTATCTCTAACAGGGGCTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp CCCTGTCTATTTCCACGGCTCTCCTCCACTCCTGGGCTCCGCATAACACAGCCATCTCACCTCTTGGCATaGGGATTAGAAGGAAAGAAA +
Preference number: 4 (lower is better)
Translates to: PCLFPRLSSTPGLRITQPSHLLA*GLEGKK
Trigger: TTTCTTTCCTTCTAATCCTCATGCCAAGAGGTGAGA...TGGCTGTGTTATGCGGAGCCCAGGAGTGGAGGAGAGCCGTGGAAATAGACAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR GCA 90 bp TCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCGATTTGATCCCACTCTaGCTCCTGAGACACCGTCAC +
Preference number: 4 (lower is better)
Translates to: SSAQGQQKRESKNKGEGLDLIPL*LLRHRH
Trigger: GTGACGGTGTCTCAGGAGGCAGAGTGGGATCAAATC...GAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409949.5
CDS-3UTR GCA 90 bp ACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATGCCCCAGAACGCACCTaGCGGCGCTCAGGATCTTCC +
Preference number: 4 (lower is better)
Translates to: TINSPSNNIFAPAEASWDAPERT*RRSGSS
Trigger: GGAAGATCCTGAGCGCCGGCAGGTGCGTTCTGGGGC...ATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp CCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTAACTCTCTGAGTGCTTaGAGCAGCTCCTCCTTTCGC +
Preference number: 4 (lower is better)
Translates to: PLHRDSRRGRVKIKAKASNSLSA*SSSSFR
Trigger: GCGAAAGGAGGAGCTGCTGCAAGCACTCAGAGAGTT...AGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp TCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCAACTCTCTGAGTGCTTaGAGCAGCTCCTCCTTTCGC +
Preference number: 4 (lower is better)
Translates to: SSAQGQQKRESKNKGEGLNSLSA*SSSSFR
Trigger: GCGAAAGGAGGAGCTGCTGCAAGCACTCAGAGAGTT...GAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp GCTGTTTGGTCCTGGAAGTGTAAAGGAAAGCCTTTTCAAGTACGTGAAGTAGACTGGTCCACTGACCACTaGTGGGGCAGGTGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: AVWSWKCKGKPFQVREVDWSTDH*WGRCLG
Trigger: GCCCAAGCACCTGCCCCAGCAGTGGTCAGTGGACCA...GTCTACTTCACGTACTTGAAAAGGCTTTCCTTTACACTTCCAGGACCAAACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR GCA 90 bp AGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGAGGTGGTCCACTGACCACTaGTGGGGCAGGTGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: RGRVKIKAKASLVHKNERWSTDH*WGRCLG
Trigger: GCCCAAGCACCTGCCCCAGCAGTGGTCAGTGGACCA...CCTCTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp TTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCTCCTAACAGGACCGATAACTGGGCCGCACACCTaGAGCGGGCTCACGTTAAAG +
Preference number: 4 (lower is better)
Translates to: FTSPAFGRTFSPLLTGPITGPHT*SGLTLK
Trigger: CTTTAACGTGAGCCCGCTGCAGGTGTGCGGCCCAGT...TATCGGTCCTGTTAGGAGGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409014.5
ENST00000409018.7
CDS-3UTR CCA 90 bp TTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCTCCTAACAGGACCGATACTCCTTCGGCGGCGCTaGATGCCTTTCCAGAGGACA +
Preference number: 4 (lower is better)
Translates to: FTSPAFGRTFSPLLTGPILLRRR*MPFQRT
Trigger: TGTCCTCTGGAAAGGCATCCAGCGCCGCCGAAGGAG...TATCGGTCCTGTTAGGAGGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
CDS-3UTR CCA 90 bp CCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCAGCACTTTCTGCTGTaGCTGTTGGGTCACAGGACT +
Preference number: 4 (lower is better)
Translates to: PLHRDSRRGRVKIKAKASQHFLL*LLGHRT
Trigger: AGTCCTGTGACCCAACAGCCACAGCAGAAAGTGCTG...AGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409949.5
CDS-3UTR CCA 90 bp TCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCCCTGCAGAAGCTTGCTaGCATCTTCTGAGCATCCCA +
Preference number: 4 (lower is better)
Translates to: SSAQGQQKRESKNKGEGLPAEAC*HLLSIP
Trigger: TGGGATGCTCAGAAGATGCCAGCAAGCTTCTGCAGG...GAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp TCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCACATCGTGGGAGTTGTaGTCCTTCATCTCGATGGGG +
Preference number: 4 (lower is better)
Translates to: SSAQGQQKRESKNKGEGLTSWEL*SFISMG
Trigger: CCCCATCGAGATGAAGGACCACAACTCCCACGATGT...GAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp CCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTAGCAGCAGCACATCGTaGGAGTTGTGGTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: PLHRDSRRGRVKIKAKASSSSTS*ELWSFI
Trigger: GATGAAGGACCACAACTCCCACGATGTGCTGCTGCT...AGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp TCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCAGCAGCAGCACATCGTaGGAGTTGTGGTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: SSAQGQQKRESKNKGEGLSSSTS*ELWSFI
Trigger: GATGAAGGACCACAACTCCCACGATGTGCTGCTGCT...GAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp CCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTTTCTGGTCTCCAGGCTaGCAGCCTCTTGAAGCATCT +
Preference number: 4 (lower is better)
Translates to: PLHRDSRRGRVKIKAKASFWSPG*QPLEAS
Trigger: AGATGCTTCAAGAGGCTGCCAGCCTGGAGACCAGAA...AGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp CCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTCCCAGTGATAGGGTaGAAGTGTGTGGCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: PLHRDSRRGRVKIKAKASLPVIG*KCVAGS
Trigger: ACTTCCTGCCACACACTTCCACCCTATCACTGGGAG...AGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp ACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATTCTGCTGTCTCGGACTaGGCCGCACACCTGCAGCGG +
Preference number: 4 (lower is better)
Translates to: TINSPSNNIFAPAEASWDSAVSD*AAHLQR
Trigger: CCGCTGCAGGTGTGCGGCCCAGTCCGAGACAGCAGA...ATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409014.5
ENST00000409018.7
CDS-3UTR TCA 90 bp AGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGAGGGGCCTCCTTTTTAGCTaGCTGGGACACGCAGCCTCG +
Preference number: 4 (lower is better)
Translates to: RGRVKIKAKASLVHKNERGLLFS*LGHAAS
Trigger: CGAGGCTGCGTGTCCCAGTCAGCTAAAAAGGAGGCC...CCTCTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000312994.9
ENST00000409242.5
ENST00000409949.5
CDS-3UTR TCA 90 bp TCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCCTTGCTGGCATCTTCTaGGCATCCCACTCCAACTTT +
Preference number: 4 (lower is better)
Translates to: SSAQGQQKRESKNKGEGLLAGIF*ASHSNF
Trigger: AAAGTTGGAGTGGGATGCTCAGAAGATGCCAGCAAG...GAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp CCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGCTGGCATCTTCTaGGCATCCCACTCCAACTTT +
Preference number: 4 (lower is better)
Translates to: PLHRDSRRGRVKIKAKASLAGIF*ASHSNF
Trigger: AAAGTTGGAGTGGGATGCTCAGAAGATGCCAGCAAG...AGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp ATTCTGAGTTGTGTCACACAGGCTTTGACAATTAATGATGTACTAAAATGGGAAGCAGGCTCTCCGCGTTaGGCAGGGCCCTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: ILSCVTQALTINDVLKWEAGSPR*AGPWPQ
Trigger: CTGGGGCCAGGGCCCTGCTCAACGCGGAGAGCCTGC...TTCCCATTTTAGTACATCATTAATTGTCAAAGCCTGTGTGACACAACTCAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp AGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGAGCTCCTCCTTTCGCTaGGTAGGCAGGCTCTCCGCG +
Preference number: 4 (lower is better)
Translates to: RRGRVKIKAKASLVHKNESSSFR*VGRLSA
Trigger: CGCGGAGAGCCTGCCTACTCAGCGAAAGGAGGAGCT...CTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp CAAAACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGAGTCCAGGAAGTGCTaGCGCCAGCGGCTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: QNHKLSFKQYLCSSRSILESRKC*RQRLSS
Trigger: GCTGGAGAGCCGCTGGCGTCAGCACTTCCTGGACTC...CAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp ATAAATTTGACTCCTTGTTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCGAGTCCAGGAAGTGCTaGCGCCAGCGGCTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: INLTPCSLLQPLEELFLPESRKC*RQRLSS
Trigger: GCTGGAGAGCCGCTGGCGTCAGCACTTCCTGGACTC...GGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAACAAGGAGTCAAATTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR TCA 90 bp AGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGAGGATGGTTGTGGTCCACTaGCCACTGCTGGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: RGRVKIKAKASLVHKNERMVVVH*PLLGQV
Trigger: CACCTGCCCCAGCAGTGGTCAGTGGACCACAACCAT...CCTCTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp ATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGATGGTTGTGGTCCACTaGCCACTGCTGGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: IFPLHRDSRRGRVKIKAKMVVVH*PLLGQV
Trigger: CACCTGCCCCAGCAGTGGTCAGTGGACCACAACCAT...CTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp ATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGAAAACAGCAGCTGTTaGCGCGTCGAACCCGCAGCG +
Preference number: 4 (lower is better)
Translates to: IFPLHRDSRRGRVKIKAKENSSC*RVEPAA
Trigger: CGCTGCGGGTTCGACGCGGCAACAGCTGCTGTTTTC...CTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312994.9
ENST00000409242.5
ENST00000409949.5
CDS-3UTR GCA 90 bp AAGCTAAAAATCTTGCAGTTCTGGGGCAGGAGGAGTGCAACAAGCAGGCAACAACTGCCCAGCACTTTCTaGTGTGGCTGTTGGGTCACA +
Preference number: 4 (lower is better)
Translates to: KLKILQFWGRRSATSRQQLPSTF*CGCWVT
Trigger: TGTGACCCAACAGCCACAGCAGAAAGTGCTGGGCAG...TTGTTGCCTGCTTGTTGCACTCCTCCTGCCCCAGAACTGCAAGATTTTTAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
CDS-3UTR GCA 90 bp AATGTATTAAGTAAGCTCAGTGTCCCAGGCTTCAGAGGAGACAGAGAAGTCCTCGGGGCAGCTCTCTACTaGCCAGCACTTTCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: NVLSKLSVPGFRGDREVLGAALY*PALSAV
Trigger: CACAGCAGAAAGTGCTGGGCAGTAGAGAGCTGCCCC...GAGGACTTCTCTGTCTCCTCTGAAGCCTGGGACACTGAGCTTACTTAATACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
CDS-3UTR GCA 90 bp GGACAGCCCCTGTTAGAGATAAACCGAGGCACTAGACAAGGAAGAAATGCATTAGGGGCAGCTCTCTACTaGCCAGCACTTTCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: GQPLLEINRGTRQGRNALGAALY*PALSAV
Trigger: CACAGCAGAAAGTGCTGGGCAGTAGAGAGCTGCCCC...TAATGCATTTCTTCCTTGTCTAGTGCCTCGGTTTATCTCTAACAGGGGCTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409949.5
CDS-3UTR GCA 90 bp CTTTGGAAGAACTTTTTCTCCCCTCCTAACAGGACCGATATACTGGACAGCCCCGATTTGATCCCACTCTaGCTCCTGAGACACCGTCAC +
Preference number: 4 (lower is better)
Translates to: LWKNFFSPPNRTDILDSPDLIPL*LLRHRH
Trigger: GTGACGGTGTCTCAGGAGGCAGAGTGGGATCAAATC...GGGGCTGTCCAGTATATCGGTCCTGTTAGGAGGGGAGAAAAAGTTCTTCCAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
CDS-3UTR GCA 90 bp TCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTCAGCATCCCAGTTaGTGCAACGAAGTAGAAGGG +
Preference number: 4 (lower is better)
Translates to: SSAQGQQKRESKNKGEGLSQHPS*CNEVEG
Trigger: CCCTTCTACTTCGTTGCAGCAACTGGGATGCTGAGA...GAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp CCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTTCTCAGCATCCCAGTTaGTGCAACGAAGTAGAAGGG +
Preference number: 4 (lower is better)
Translates to: PLHRDSRRGRVKIKAKASSQHPS*CNEVEG
Trigger: CCCTTCTACTTCGTTGCAGCAACTGGGATGCTGAGA...AGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp CCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTTCACCAGCTCACCAATaGCTTTGTCCAGGTACCACT +
Preference number: 4 (lower is better)
Translates to: PLHRDSRRGRVKIKAKASSPAHQ*LCPGTT
Trigger: AGTGGTACCTGGACAAAGGCATTGGTGAGCTGGTGA...AGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp CCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTAACTCCTTGGCCAGCTaGTGCTTCAGATGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: PLHRDSRRGRVKIKAKASNSLAS*CFRWLS
Trigger: TGACAACCATCTGAAGCAGCAGCTGGCCAAGGAGTT...AGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp AAGATAACATTACTCTCAGAAAGGGGTGAAGCTAAAAATCTTGCAGTTCTGGGGCAGCGGCTCTCCAGCTaGATGAGGGAGCGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: KITLLSERGEAKNLAVLGQRLSS*MRERRP
Trigger: TGGCCTGCGCTCCCTCATGCAGCTGGAGAGCCGCTG...CCCCAGAACTGCAAGATTTTTAGCTTCACCCCTTTCTGAGAGTAATGTTATCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR GCA 90 bp CAAAACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGCAGCGGCTCTCCAGCTaGATGAGGGAGCGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: QNHKLSFKQYLCSSRSILQRLSS*MRERRP
Trigger: TGGCCTGCGCTCCCTCATGCAGCTGGAGAGCCGCTG...CAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp AGAATTCTTCATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATCAGCGGCTCTCCAGCTaGATGAGGGAGCGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: RILHFSSAQGQQKRESKNQRLSS*MRERRP
Trigger: TGGCCTGCGCTCCCTCATGCAGCTGGAGAGCCGCTG...ATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAATGAAGAATTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp ACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATCACTGCTGGGGCAGGTaGTTGGGCTGCATGGAGTCC +
Preference number: 4 (lower is better)
Translates to: TINSPSNNIFAPAEASWDHCWGR*LGCMES
Trigger: GGACTCCATGCAGCCCAAGCACCTGCCCCAGCAGTG...ATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp AGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGTGGTCCACTGACCACTaGTGGGGCAGGTGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: RRGRVKIKAKASLVHKNEWSTDH*WGRCLG
Trigger: GCCCAAGCACCTGCCCCAGCAGTGGTCAGTGGACCA...CTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp TCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCACACTGTCCTCTCACTaGTACTCCTATGAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: SSAQGQQKRESKNKGEGLTLSSH*YSYEAQ
Trigger: CTGGGCTTCATAGGAGTAGCAGTGAGAGGACAGTGT...GAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR CCA 90 bp AGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGAGGCTGGGGTCTCTCCCTTaGTGGTTGCCTGGCACCATC +
Preference number: 4 (lower is better)
Translates to: RGRVKIKAKASLVHKNERLGSLP*WLPGTI
Trigger: GATGGTGCCAGGCAACCACCAAGGGAGAGACCCCAG...CCTCTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp CCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTTTTCATTGGAGATTCTaGTCTCCAGGCTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: PLHRDSRRGRVKIKAKASFHWRF*SPGWQP
Trigger: AGGCTGCCAGCCTGGAGACCAGAATCTCCAATGAAA...AGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp AGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGGCTGGGGCAGGTGCTTaGGCTGCATGGAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: RRGRVKIKAKASLVHKNEAGAGA*AAWSPG
Trigger: TCCTGGACTCCATGCAGCCCAAGCACCTGCCCCAGC...CTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp ACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATGCTGGGGCAGGTGCTTaGGCTGCATGGAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: TINSPSNNIFAPAEASWDAGAGA*AAWSPG
Trigger: TCCTGGACTCCATGCAGCCCAAGCACCTGCCCCAGC...ATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp ACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATTCCACTGACCACTGCTaGGGCAGGTGCTTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: TINSPSNNIFAPAEASWDSTDHC*GRCLGC
Trigger: GCAGCCCAAGCACCTGCCCCAGCAGTGGTCAGTGGA...ATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp CTTTGGAAGAACTTTTTCTCCCCTCCTAACAGGACCGATATACTGGACAGCCCCCTCCCAGTGATAGGGTaGAAGTGTGTGGCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: LWKNFFSPPNRTDILDSPLPVIG*KCVAGS
Trigger: ACTTCCTGCCACACACTTCCACCCTATCACTGGGAG...GGGGCTGTCCAGTATATCGGTCCTGTTAGGAGGGGAGAAAAAGTTCTTCCAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp CTTTGGAAGAACTTTTTCTCCCCTCCTAACAGGACCGATATACTGGACAGCCCCGGGAGATGGAGTTTGTaGTTCTTTCTGCCCCACCCA +
Preference number: 4 (lower is better)
Translates to: LWKNFFSPPNRTDILDSPGRWSL*FFLPHP
Trigger: TGGGTGGGGCAGAAAGAACCACAAACTCCATCTCCC...GGGGCTGTCCAGTATATCGGTCCTGTTAGGAGGGGAGAAAAAGTTCTTCCAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR TCA 90 bp TCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTTTCTTGGCTTCTGCTaGGATTCTGTTGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: SSAQGQQKRESKNKGEGLFLGFC*DSVASP
Trigger: TGGGGAAGCAACAGAATCTCAGCAGAAGCCAAGAAA...GAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp AAGATAACATTACTCTCAGAAAGGGGTGAAGCTAAAAATCTTGCAGTTCTGGGGAGCTCCTCCTTTCGCTaGGTAGGCAGGCTCTCCGCG +
Preference number: 4 (lower is better)
Translates to: KITLLSERGEAKNLAVLGSSSFR*VGRLSA
Trigger: CGCGGAGAGCCTGCCTACTCAGCGAAAGGAGGAGCT...CCCCAGAACTGCAAGATTTTTAGCTTCACCCCTTTCTGAGAGTAATGTTATCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR TCA 90 bp AGAATTCTTCATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAGCTCCTCCTTTCGCTaGGTAGGCAGGCTCTCCGCG +
Preference number: 4 (lower is better)
Translates to: RILHFSSAQGQQKRESKNSSSFR*VGRLSA
Trigger: CGCGGAGAGCCTGCCTACTCAGCGAAAGGAGGAGCT...ATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAATGAAGAATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp ATAAATTTGACTCCTTGTTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCAGGCCACCCTGGCTGTaGCACTGCACCACCTTCAGC +
Preference number: 4 (lower is better)
Translates to: INLTPCSLLQPLEELFLPRPPWL*HCTTFS
Trigger: GCTGAAGGTGGTGCAGTGTCACAGCCAGGGTGGCCT...GGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAACAAGGAGTCAAATTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR TCA 90 bp AGAATTCTTCATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAGGCCACCCTGGCTGTaGCACTGCACCACCTTCAGC +
Preference number: 4 (lower is better)
Translates to: RILHFSSAQGQQKRESKNRPPWL*HCTTFS
Trigger: GCTGAAGGTGGTGCAGTGTCACAGCCAGGGTGGCCT...ATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAATGAAGAATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp CAAAACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGAGGCCACCCTGGCTGTaGCACTGCACCACCTTCAGC +
Preference number: 4 (lower is better)
Translates to: QNHKLSFKQYLCSSRSILRPPWL*HCTTFS
Trigger: GCTGAAGGTGGTGCAGTGTCACAGCCAGGGTGGCCT...CAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp TTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCTCCTAACAGGACCGATATTCCGGAGCAGCTTCTaGTGGTTGTGGTCCACTGAC +
Preference number: 4 (lower is better)
Translates to: FTSPAFGRTFSPLLTGPIFRSSF*WLWSTD
Trigger: GTCAGTGGACCACAACCATCAGAAGCTGCTCCGGAA...TATCGGTCCTGTTAGGAGGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR GCA 90 bp ATTCTGAGTTGTGTCACACAGGCTTTGACAATTAATGATGTACTAAAATGGGAACGAGGAGCTACCAGGTaGCGCGGGCGGGGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: ILSCVTQALTINDVLKWERGATR*RGRGLL
Trigger: AAGGAGGCCCCGCCCGCGGCACCTGGTAGCTCCTCG...TTCCCATTTTAGTACATCATTAATTGTCAAAGCCTGTGTGACACAACTCAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312994.9
ENST00000409242.5
ENST00000409949.5
CDS-3UTR GCA 90 bp AGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGAGGTTCGGCGGCGCTGGATaGCTTTCCAGAGGACAAACC +
Preference number: 4 (lower is better)
Translates to: RGRVKIKAKASLVHKNERFGGAG*LSRGQT
Trigger: GGTTTGTCCTCTGGAAAGGCATCCAGCGCCGCCGAA...CCTCTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409949.5
CDS-3UTR GCA 90 bp TCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCCACCGTCACCACCTTTaGTTTAAGGATCCGTTCCTT +
Preference number: 4 (lower is better)
Translates to: SSAQGQQKRESKNKGEGLHRHHL*FKDPFL
Trigger: AAGGAACGGATCCTTAAAGCAAAGGTGGTGACGGTG...GAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409949.5
CDS-3UTR GCA 90 bp CCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTAGCAAATTGTTTCTCTaGCGCATGGCTAGGTATCGG +
Preference number: 4 (lower is better)
Translates to: PLHRDSRRGRVKIKAKASSKLFL*RMARYR
Trigger: CCGATACCTAGCCATGCGGCAGAGAAACAATTTGCT...AGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp CTTTGGAAGAACTTTTTCTCCCCTCCTAACAGGACCGATATACTGGACAGCCCCTCTCAGCATCCCAGTTaGTGCAACGAAGTAGAAGGG +
Preference number: 4 (lower is better)
Translates to: LWKNFFSPPNRTDILDSPSQHPS*CNEVEG
Trigger: CCCTTCTACTTCGTTGCAGCAACTGGGATGCTGAGA...GGGGCTGTCCAGTATATCGGTCCTGTTAGGAGGGGAGAAAAAGTTCTTCCAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR GCA 90 bp ATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGCTCTCCCTTGGTGGTTaGCTGGCACCATCCCATCCA +
Preference number: 4 (lower is better)
Translates to: IFPLHRDSRRGRVKIKAKLSLGG*LAPSHP
Trigger: TGGATGGGATGGTGCCAGGCAACCACCAAGGGAGAG...CTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp TCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTTCTTCTATCACAAGTaGAGAGGGGCTGTCCATCAG +
Preference number: 4 (lower is better)
Translates to: SSAQGQQKRESKNKGEGLFFYHK*RGAVHQ
Trigger: CTGATGGACAGCCCCTCTGCACTTGTGATAGAAGAA...GAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp CTTTGGAAGAACTTTTTCTCCCCTCCTAACAGGACCGATATACTGGACAGCCCCATCTCGATGGGGAAGTaGTTCCGGTACTCATGTGGA +
Preference number: 4 (lower is better)
Translates to: LWKNFFSPPNRTDILDSPISMGK*FRYSCG
Trigger: TCCACATGAGTACCGGAAGCACTTCCCCATCGAGAT...GGGGCTGTCCAGTATATCGGTCCTGTTAGGAGGGGAGAAAAAGTTCTTCCAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR GCA 90 bp AGTCGCGAAGTTTTACATTTACATCCAGTGAGCCTTGTGCTTACAAGTAGTTTTGCCCCAGAACGCACCTaGCGGCGCTCAGGATCTTCC +
Preference number: 4 (lower is better)
Translates to: SREVLHLHPVSLVLTSSFAPERT*RRSGSS
Trigger: GGAAGATCCTGAGCGCCGGCAGGTGCGTTCTGGGGC...AAAACTACTTGTAAGCACAAGGCTCACTGGATGTAAATGTAAAACTTCGCGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR GCA 90 bp ATAAATTTGACTCCTTGTTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCTGGTCCACTGACCACTaGTGGGGCAGGTGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: INLTPCSLLQPLEELFLPWSTDH*WGRCLG
Trigger: GCCCAAGCACCTGCCCCAGCAGTGGTCAGTGGACCA...GGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAACAAGGAGTCAAATTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR GCA 90 bp AGAATTCTTCATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATTGGTCCACTGACCACTaGTGGGGCAGGTGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: RILHFSSAQGQQKRESKNWSTDH*WGRCLG
Trigger: GCCCAAGCACCTGCCCCAGCAGTGGTCAGTGGACCA...ATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAATGAAGAATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp AATGTATTAAGTAAGCTCAGTGTCCCAGGCTTCAGAGGAGACAGAGAAGTCCTCCCTTCCAAATTTACCTaGTGTCTCGGACTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: NVLSKLSVPGFRGDREVLPSKFT*CLGLGR
Trigger: GCGGCCCAGTCCGAGACAGCAGGTAAATTTGGAAGG...GAGGACTTCTCTGTCTCCTCTGAAGCCTGGGACACTGAGCTTACTTAATACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409675.5
CDS-3UTR CCA 90 bp TCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTTCTGCTGTGGCTGTTaGGTCACAGGACTCGTTTTA +
Preference number: 4 (lower is better)
Translates to: SSAQGQQKRESKNKGEGLFCCGC*VTGLVL
Trigger: TAAAACGAGTCCTGTGACCCAACAGCCACAGCAGAA...GAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409949.5
CDS-3UTR CCA 90 bp AAGCTAAAAATCTTGCAGTTCTGGGGCAGGAGGAGTGCAACAAGCAGGCAACAATGTTTCTCTGCCGCATaGCTAGGTATCGGAGGTCCA +
Preference number: 4 (lower is better)
Translates to: KLKILQFWGRRSATSRQQCFSAA*LGIGGP
Trigger: TGGACCTCCGATACCTAGCCATGCGGCAGAGAAACA...TTGTTGCCTGCTTGTTGCACTCCTCCTGCCCCAGAACTGCAAGATTTTTAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp AATGTATTAAGTAAGCTCAGTGTCCCAGGCTTCAGAGGAGACAGAGAAGTCCTCCCCTTGGTGGTTGCCTaGCACCATCCCATCCATCTT +
Preference number: 4 (lower is better)
Translates to: NVLSKLSVPGFRGDREVLPLVVA*HHPIHL
Trigger: AAGATGGATGGGATGGTGCCAGGCAACCACCAAGGG...GAGGACTTCTCTGTCTCCTCTGAAGCCTGGGACACTGAGCTTACTTAATACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp AGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGCTGGGGTCTCTCCCTTaGTGGTTGCCTGGCACCATC +
Preference number: 4 (lower is better)
Translates to: RRGRVKIKAKASLVHKNELGSLP*WLPGTI
Trigger: GATGGTGCCAGGCAACCACCAAGGGAGAGACCCCAG...CTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp TCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCCATAGTAGTTGGAAATaGCATGGCAGGAGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: SSAQGQQKRESKNKGEGLHSSWK*HGRRCR
Trigger: TCTGCACCTCCTGCCATGCCATTTCCAACTACTATG...GAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp GCTGTTTGGTCCTGGAAGTGTAAAGGAAAGCCTTTTCAAGTACGTGAAGTAGACGGTGCTTGGGCTGCATaGAGTCCAGGAAGTGCTGAC +
Preference number: 4 (lower is better)
Translates to: AVWSWKCKGKPFQVREVDGAWAA*SPGSAD
Trigger: GTCAGCACTTCCTGGACTCCATGCAGCCCAAGCACC...GTCTACTTCACGTACTTGAAAAGGCTTTCCTTTACACTTCCAGGACCAAACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp ATAAATTTGACTCCTTGTTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCGCTGGGGCAGGTGCTTaGGCTGCATGGAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: INLTPCSLLQPLEELFLPAGAGA*AAWSPG
Trigger: TCCTGGACTCCATGCAGCCCAAGCACCTGCCCCAGC...GGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAACAAGGAGTCAAATTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp AAGATAACATTACTCTCAGAAAGGGGTGAAGCTAAAAATCTTGCAGTTCTGGGGTCCACTGACCACTGCTaGGGCAGGTGCTTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: KITLLSERGEAKNLAVLGSTDHC*GRCLGC
Trigger: GCAGCCCAAGCACCTGCCCCAGCAGTGGTCAGTGGA...CCCCAGAACTGCAAGATTTTTAGCTTCACCCCTTTCTGAGAGTAATGTTATCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp AGAATTCTTCATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATTCCACTGACCACTGCTaGGGCAGGTGCTTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: RILHFSSAQGQQKRESKNSTDHC*GRCLGC
Trigger: GCAGCCCAAGCACCTGCCCCAGCAGTGGTCAGTGGA...ATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAATGAAGAATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp CATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATTATCCACTGACCACTGCTaGGGCAGGTGCTTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: HKLSFKQYLCSSRSILGLSTDHC*GRCLGC
Trigger: GCAGCCCAAGCACCTGCCCCAGCAGTGGTCAGTGGA...TAATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp CAAAACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGTCCACTGACCACTGCTaGGGCAGGTGCTTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: QNHKLSFKQYLCSSRSILSTDHC*GRCLGC
Trigger: GCAGCCCAAGCACCTGCCCCAGCAGTGGTCAGTGGA...CAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp CCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTACAGGACCGATATACTaGACAGCCCCTGTTAGAGAT +
Preference number: 4 (lower is better)
Translates to: PLHRDSRRGRVKIKAKASTGPIY*TAPVRD
Trigger: ATCTCTAACAGGGGCTGTCCAGTATATCGGTCCTGT...AGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp GCTGTTTGGTCCTGGAAGTGTAAAGGAAAGCCTTTTCAAGTACGTGAAGTAGACCTCACGTTAAAGACCTaGAACCTGTGCGGCCGCCTG +
Preference number: 4 (lower is better)
Translates to: AVWSWKCKGKPFQVREVDLTLKT*NLCGRL
Trigger: CAGGCGGCCGCACAGGTTCCAGGTCTTTAACGTGAG...GTCTACTTCACGTACTTGAAAAGGCTTTCCTTTACACTTCCAGGACCAAACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409018.7
CDS-3UTR TCA 90 bp CAAAACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGCCTCCTTTTTAGCTaGCTGGGACACGCAGCCTCG +
Preference number: 4 (lower is better)
Translates to: QNHKLSFKQYLCSSRSILGLLFS*LGHAAS
Trigger: CGAGGCTGCGTGTCCCAGTCAGCTAAAAAGGAGGCC...CAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312994.9
ENST00000409242.5
ENST00000409949.5
CDS-3UTR TCA 90 bp AAGATAACATTACTCTCAGAAAGGGGTGAAGCTAAAAATCTTGCAGTTCTGGGGGCACTGGAGTGCAGCTaGTCATCTTCTGGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: KITLLSERGEAKNLAVLGALECS*SSSGGG
Trigger: GCCCCCTCCAGAAGATGATCAGCTGCACTCCAGTGC...CCCCAGAACTGCAAGATTTTTAGCTTCACCCCTTTCTGAGAGTAATGTTATCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
CDS-3UTR TCA 90 bp CAAAACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGCACTGGAGTGCAGCTaGTCATCTTCTGGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: QNHKLSFKQYLCSSRSILALECS*SSSGGG
Trigger: GCCCCCTCCAGAAGATGATCAGCTGCACTCCAGTGC...CAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409949.5
CDS-3UTR TCA 90 bp TTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCTCCTAACAGGACCGATAAAGAAAGAGAGCCACTaGAATCTGGGCATCCCTGGC +
Preference number: 4 (lower is better)
Translates to: FTSPAFGRTFSPLLTGPIKKESH*NLGIPG
Trigger: GCCAGGGATGCCCAGATTTCAGTGGCTCTCTTTCTT...TATCGGTCCTGTTAGGAGGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR TCA 90 bp TCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTGTTATAAAACTCTCTaGGTGCTTGCAGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SSAQGQQKRESKNKGEGLCYKTL*VLAAAP
Trigger: AGGAGCTGCTGCAAGCACTCAGAGAGTTTTATAACA...GAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp CCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTGAAGCATCTCCTCTGTaGCCACGTCTGTGTTATAAA +
Preference number: 4 (lower is better)
Translates to: PLHRDSRRGRVKIKAKASEASPL*PRLCYK
Trigger: TTTATAACACAGACGTGGTCACAGAGGAGATGCTTC...AGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp ACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATAGGCTGGCAGCCTCTTaGAGCATCTCCTCTGTGACC +
Preference number: 4 (lower is better)
Translates to: TINSPSNNIFAPAEASWDRLAAS*SISSVT
Trigger: GGTCACAGAGGAGATGCTTCAAGAGGCTGCCAGCCT...ATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp AGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGAGGCTGGCAGCCTCTTaGAGCATCTCCTCTGTGACC +
Preference number: 4 (lower is better)
Translates to: RRGRVKIKAKASLVHKNERLAAS*SISSVT
Trigger: GGTCACAGAGGAGATGCTTCAAGAGGCTGCCAGCCT...CTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp ATAAATTTGACTCCTTGTTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCATGGTTGTGGTCCACTaGCCACTGCTGGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: INLTPCSLLQPLEELFLPMVVVH*PLLGQV
Trigger: CACCTGCCCCAGCAGTGGTCAGTGGACCACAACCAT...GGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAACAAGGAGTCAAATTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR TCA 90 bp AGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGAGGTTCCGGAGCAGCTTCTaGTGGTTGTGGTCCACTGAC +
Preference number: 4 (lower is better)
Translates to: RGRVKIKAKASLVHKNERFRSSF*WLWSTD
Trigger: GTCAGTGGACCACAACCATCAGAAGCTGCTCCGGAA...CCTCTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp AAGCTAAAAATCTTGCAGTTCTGGGGCAGGAGGAGTGCAACAAGCAGGCAACAAGTACGTGAAGTAGACTaGAGTGACCCAGATGGGATG +
Preference number: 4 (lower is better)
Translates to: KLKILQFWGRRSATSRQQVREVD*SDPDGM
Trigger: CATCCCATCTGGGTCACTTCAGTCTACTTCACGTAC...TTGTTGCCTGCTTGTTGCACTCCTCCTGCCCCAGAACTGCAAGATTTTTAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR GCA 90 bp ACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATTTCGGCGGCGCTGGATaGCTTTCCAGAGGACAAACC +
Preference number: 4 (lower is better)
Translates to: TINSPSNNIFAPAEASWDFGGAG*LSRGQT
Trigger: GGTTTGTCCTCTGGAAAGGCATCCAGCGCCGCCGAA...ATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409949.5
CDS-3UTR GCA 90 bp AGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGGGGGCAGCTCTCTACTaGCCAGCACTTTCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: RRGRVKIKAKASLVHKNEGAALY*PALSAV
Trigger: CACAGCAGAAAGTGCTGGGCAGTAGAGAGCTGCCCC...CTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409949.5
CDS-3UTR GCA 90 bp CTTTGGAAGAACTTTTTCTCCCCTCCTAACAGGACCGATATACTGGACAGCCCCCACCGTCACCACCTTTaGTTTAAGGATCCGTTCCTT +
Preference number: 4 (lower is better)
Translates to: LWKNFFSPPNRTDILDSPHRHHL*FKDPFL
Trigger: AAGGAACGGATCCTTAAAGCAAAGGTGGTGACGGTG...GGGGCTGTCCAGTATATCGGTCCTGTTAGGAGGGGAGAAAAAGTTCTTCCAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
CDS-3UTR GCA 90 bp CCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCCTCTTCTCCCAATCTaGTCATTCCTTTGCTTCGAA +
Preference number: 4 (lower is better)
Translates to: PLHRDSRRGRVKIKAKASPLLPI*SFLCFE
Trigger: TTCGAAGCAAAGGAATGAGCAGATTGGGAGAAGAGG...AGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp TCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCCCTCTTCTCCCAATCTaGTCATTCCTTTGCTTCGAA +
Preference number: 4 (lower is better)
Translates to: SSAQGQQKRESKNKGEGLPLLPI*SFLCFE
Trigger: TTCGAAGCAAAGGAATGAGCAGATTGGGAGAAGAGG...GAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp ACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATCTCTCCCTTGGTGGTTaGCTGGCACCATCCCATCCA +
Preference number: 4 (lower is better)
Translates to: TINSPSNNIFAPAEASWDLSLGG*LAPSHP
Trigger: TGGATGGGATGGTGCCAGGCAACCACCAAGGGAGAG...ATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp CTTTGGAAGAACTTTTTCTCCCCTCCTAACAGGACCGATATACTGGACAGCCCCTGTAGGAGTCTCTCTTaGCACACACTACACACAGGT +
Preference number: 4 (lower is better)
Translates to: LWKNFFSPPNRTDILDSPCRSLS*HTLHTG
Trigger: ACCTGTGTGTAGTGTGTGGCAAGAGAGACTCCTACA...GGGGCTGTCCAGTATATCGGTCCTGTTAGGAGGGGAGAAAAAGTTCTTCCAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR GCA 90 bp CCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTATAAAACTCTCTGAGTaGTTGCAGCAGCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: PLHRDSRRGRVKIKAKASIKLSE*LQQLLL
Trigger: AAGGAGGAGCTGCTGCAAGCACTCAGAGAGTTTTAT...AGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp AAGATAACATTACTCTCAGAAAGGGGTGAAGCTAAAAATCTTGCAGTTCTGGGGGGCAGGTGCTTGGGCTaGATGGAGTCCAGGAAGTGC +
Preference number: 4 (lower is better)
Translates to: KITLLSERGEAKNLAVLGGRCLG*MESRKC
Trigger: GCACTTCCTGGACTCCATGCAGCCCAAGCACCTGCC...CCCCAGAACTGCAAGATTTTTAGCTTCACCCCTTTCTGAGAGTAATGTTATCTT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR GCA 90 bp CATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATTAGGCAGGTGCTTGGGCTaGATGGAGTCCAGGAAGTGC +
Preference number: 4 (lower is better)
Translates to: HKLSFKQYLCSSRSILGLGRCLG*MESRKC
Trigger: GCACTTCCTGGACTCCATGCAGCCCAAGCACCTGCC...TAATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp ATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCAAGATGCAGGATGTaGACGTGGGTTCATGGGCTG +
Preference number: 4 (lower is better)
Translates to: IFPLHRDSRRGRVKIKAKARCRM*TWVHGL
Trigger: CAGCCCATGAACCCACGTGCACATCCTGCATCTTGC...CTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR GCA 90 bp ATAAATTTGACTCCTTGTTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCACTGGGCCGCACACCTaGAGCGGGCTCACGTTAAAG +
Preference number: 4 (lower is better)
Translates to: INLTPCSLLQPLEELFLPTGPHT*SGLTLK
Trigger: CTTTAACGTGAGCCCGCTGCAGGTGTGCGGCCCAGT...GGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAACAAGGAGTCAAATTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409014.5
ENST00000409018.7
CDS-3UTR CCA 90 bp AATGTATTAAGTAAGCTCAGTGTCCCAGGCTTCAGAGGAGACAGAGAAGTCCTCTCCTTTTTAGCTGACTaGGACACGCAGCCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: NVLSKLSVPGFRGDREVLSFLAD*DTQPRR
Trigger: CCTTCGAGGCTGCGTGTCCCAGTCAGCTAAAAAGGA...GAGGACTTCTCTGTCTCCTCTGAAGCCTGGGACACTGAGCTTACTTAATACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR CCA 90 bp CATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATTACTCCTTCGGCGGCGCTaGATGCCTTTCCAGAGGACA +
Preference number: 4 (lower is better)
Translates to: HKLSFKQYLCSSRSILGLLLRRR*MPFQRT
Trigger: TGTCCTCTGGAAAGGCATCCAGCGCCGCCGAAGGAG...TAATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409949.5
CDS-3UTR CCA 90 bp CAAAACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGCTCCTTCGGCGGCGCTaGATGCCTTTCCAGAGGACA +
Preference number: 4 (lower is better)
Translates to: QNHKLSFKQYLCSSRSILLLRRR*MPFQRT
Trigger: TGTCCTCTGGAAAGGCATCCAGCGCCGCCGAAGGAG...CAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409949.5
CDS-3UTR CCA 90 bp GGACAGCCCCTGTTAGAGATAAACCGAGGCACTAGACAAGGAAGAAATGCATTACAGCACTTTCTGCTGTaGCTGTTGGGTCACAGGACT +
Preference number: 4 (lower is better)
Translates to: GQPLLEINRGTRQGRNALQHFLL*LLGHRT
Trigger: AGTCCTGTGACCCAACAGCCACAGCAGAAAGTGCTG...TAATGCATTTCTTCCTTGTCTAGTGCCTCGGTTTATCTCTAACAGGGGCTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409949.5
CDS-3UTR CCA 90 bp GGACAGCCCCTGTTAGAGATAAACCGAGGCACTAGACAAGGAAGAAATGCATTACTCCACAGATTAGCTTaGGCAGGCGAACCAAGACAC +
Preference number: 4 (lower is better)
Translates to: GQPLLEINRGTRQGRNALLHRLA*AGEPRH
Trigger: GTGTCTTGGTTCGCCTGCCCAAGCTAATCTGTGGAG...TAATGCATTTCTTCCTTGTCTAGTGCCTCGGTTTATCTCTAACAGGGGCTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp TTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCTCCTAACAGGACCGATACTCCACAGATTAGCTTaGGCAGGCGAACCAAGACAC +
Preference number: 4 (lower is better)
Translates to: FTSPAFGRTFSPLLTGPILHRLA*AGEPRH
Trigger: GTGTCTTGGTTCGCCTGCCCAAGCTAATCTGTGGAG...TATCGGTCCTGTTAGGAGGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp AATGTATTAAGTAAGCTCAGTGTCCCAGGCTTCAGAGGAGACAGAGAAGTCCTCCTCCACAGATTAGCTTaGGCAGGCGAACCAAGACAC +
Preference number: 4 (lower is better)
Translates to: NVLSKLSVPGFRGDREVLLHRLA*AGEPRH
Trigger: GTGTCTTGGTTCGCCTGCCCAAGCTAATCTGTGGAG...GAGGACTTCTCTGTCTCCTCTGAAGCCTGGGACACTGAGCTTACTTAATACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp TTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCTCCTAACAGGACCGATACCTGCAGAAGCTTGCTaGCATCTTCTGAGCATCCCA +
Preference number: 4 (lower is better)
Translates to: FTSPAFGRTFSPLLTGPIPAEAC*HLLSIP
Trigger: TGGGATGCTCAGAAGATGCCAGCAAGCTTCTGCAGG...TATCGGTCCTGTTAGGAGGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp AATGTATTAAGTAAGCTCAGTGTCCCAGGCTTCAGAGGAGACAGAGAAGTCCTCTGTTTCTCTGCCGCATaGCTAGGTATCGGAGGTCCA +
Preference number: 4 (lower is better)
Translates to: NVLSKLSVPGFRGDREVLCFSAA*LGIGGP
Trigger: TGGACCTCCGATACCTAGCCATGCGGCAGAGAAACA...GAGGACTTCTCTGTCTCCTCTGAAGCCTGGGACACTGAGCTTACTTAATACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp GGACAGCCCCTGTTAGAGATAAACCGAGGCACTAGACAAGGAAGAAATGCATTATGTTTCTCTGCCGCATaGCTAGGTATCGGAGGTCCA +
Preference number: 4 (lower is better)
Translates to: GQPLLEINRGTRQGRNALCFSAA*LGIGGP
Trigger: TGGACCTCCGATACCTAGCCATGCGGCAGAGAAACA...TAATGCATTTCTTCCTTGTCTAGTGCCTCGGTTTATCTCTAACAGGGGCTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp CCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTAAATCTGGGCATCCCTaGCAGCATAAATTACCTGGT +
Preference number: 4 (lower is better)
Translates to: PLHRDSRRGRVKIKAKASKSGHP*QHKLPG
Trigger: ACCAGGTAATTTATGCTGCCAGGGATGCCCAGATTT...AGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp AAGCTAAAAATCTTGCAGTTCTGGGGCAGGAGGAGTGCAACAAGCAGGCAACAATCCTTTGCTTCGAAATaGGATGTCGACCACACCCTG +
Preference number: 4 (lower is better)
Translates to: KLKILQFWGRRSATSRQQSFASK*DVDHTL
Trigger: CAGGGTGTGGTCGACATCCCATTTCGAAGCAAAGGA...TTGTTGCCTGCTTGTTGCACTCCTCCTGCCCCAGAACTGCAAGATTTTTAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp AGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGAGGCCCTTGGTGGTTGCCTaGCACCATCCCATCCATCTT +
Preference number: 4 (lower is better)
Translates to: RGRVKIKAKASLVHKNERPLVVA*HHPIHL
Trigger: AAGATGGATGGGATGGTGCCAGGCAACCACCAAGGG...CCTCTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp CAAAACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGCTGGGGTCTCTCCCTTaGTGGTTGCCTGGCACCATC +
Preference number: 4 (lower is better)
Translates to: QNHKLSFKQYLCSSRSILLGSLP*WLPGTI
Trigger: GATGGTGCCAGGCAACCACCAAGGGAGAGACCCCAG...CAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp AGAATTCTTCATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATCTGGGGTCTCTCCCTTaGTGGTTGCCTGGCACCATC +
Preference number: 4 (lower is better)
Translates to: RILHFSSAQGQQKRESKNLGSLP*WLPGTI
Trigger: GATGGTGCCAGGCAACCACCAAGGGAGAGACCCCAG...ATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAATGAAGAATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp GGACAGCCCCTGTTAGAGATAAACCGAGGCACTAGACAAGGAAGAAATGCATTAACATCGTGGGAGTTGTaGTCCTTCATCTCGATGGGG +
Preference number: 4 (lower is better)
Translates to: GQPLLEINRGTRQGRNALTSWEL*SFISMG
Trigger: CCCCATCGAGATGAAGGACCACAACTCCCACGATGT...TAATGCATTTCTTCCTTGTCTAGTGCCTCGGTTTATCTCTAACAGGGGCTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp TTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCTCCTAACAGGACCGATAAGCAGCAGCACATCGTaGGAGTTGTGGTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: FTSPAFGRTFSPLLTGPISSSTS*ELWSFI
Trigger: GATGAAGGACCACAACTCCCACGATGTGCTGCTGCT...TATCGGTCCTGTTAGGAGGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp AGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGGGTGCTTGGGCTGCATaGAGTCCAGGAAGTGCTGAC +
Preference number: 4 (lower is better)
Translates to: RRGRVKIKAKASLVHKNEGAWAA*SPGSAD
Trigger: GTCAGCACTTCCTGGACTCCATGCAGCCCAAGCACC...CTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp TCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCATCAAGACAGCTGGATaGGAAGATCTTCCCCGAATT +
Preference number: 4 (lower is better)
Translates to: SSAQGQQKRESKNKGEGLIKTAG*EDLPRI
Trigger: AATTCGGGGAAGATCTTCCCATCCAGCTGTCTTGAT...GAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp CCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCACTTCTCCAGCCTTTaGAAGAACTTTTTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: PLHRDSRRGRVKIKAKASHFSSL*KNFFSP
Trigger: AGGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTG...AGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp TCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCGTTGCTGTTTGGTCCTaGAAGTGTAAAGGAAAGCCT +
Preference number: 4 (lower is better)
Translates to: SSAQGQQKRESKNKGEGLVAVWS*KCKGKP
Trigger: AGGCTTTCCTTTACACTTCCAGGACCAAACAGCAAC...GAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp ATTCTGAGTTGTGTCACACAGGCTTTGACAATTAATGATGTACTAAAATGGGAACCTGCTGTCTCGGACTaGGCCGCACACCTGCAGCGG +
Preference number: 4 (lower is better)
Translates to: ILSCVTQALTINDVLKWEPAVSD*AAHLQR
Trigger: CCGCTGCAGGTGTGCGGCCCAGTCCGAGACAGCAGG...TTCCCATTTTAGTACATCATTAATTGTCAAAGCCTGTGTGACACAACTCAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409675.5
CDS-3UTR TCA 90 bp TTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCTCCTAACAGGACCGATACTTGCTGGCATCTTCTaGGCATCCCACTCCAACTTT +
Preference number: 4 (lower is better)
Translates to: FTSPAFGRTFSPLLTGPILAGIF*ASHSNF
Trigger: AAAGTTGGAGTGGGATGCTCAGAAGATGCCAGCAAG...TATCGGTCCTGTTAGGAGGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR TCA 90 bp ATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGAAGAAAGAGAGCCACTaGAATCTGGGCATCCCTGGC +
Preference number: 4 (lower is better)
Translates to: IFPLHRDSRRGRVKIKAKKKESH*NLGIPG
Trigger: GCCAGGGATGCCCAGATTTCAGTGGCTCTCTTTCTT...CTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp GCTGTTTGGTCCTGGAAGTGTAAAGGAAAGCCTTTTCAAGTACGTGAAGTAGACAAGAAAGAGAGCCACTaGAATCTGGGCATCCCTGGC +
Preference number: 4 (lower is better)
Translates to: AVWSWKCKGKPFQVREVDKKESH*NLGIPG
Trigger: GCCAGGGATGCCCAGATTTCAGTGGCTCTCTTTCTT...GTCTACTTCACGTACTTGAAAAGGCTTTCCTTTACACTTCCAGGACCAAACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR TCA 90 bp TCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTTGTCCAGGTACCACTaGGCTTTTCTTCTATCACAA +
Preference number: 4 (lower is better)
Translates to: SSAQGQQKRESKNKGEGLLSRYH*AFLLSQ
Trigger: TTGTGATAGAAGAAAAGCTCAGTGGTACCTGGACAA...GAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp CTTTGGAAGAACTTTTTCTCCCCTCCTAACAGGACCGATATACTGGACAGCCCCTGTTATAAAACTCTCTaGGTGCTTGCAGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LWKNFFSPPNRTDILDSPCYKTL*VLAAAP
Trigger: AGGAGCTGCTGCAAGCACTCAGAGAGTTTTATAACA...GGGGCTGTCCAGTATATCGGTCCTGTTAGGAGGGGAGAAAAAGTTCTTCCAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR TCA 90 bp CAAAACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGAGGCTGGCAGCCTCTTaGAGCATCTCCTCTGTGACC +
Preference number: 4 (lower is better)
Translates to: QNHKLSFKQYLCSSRSILRLAAS*SISSVT
Trigger: GGTCACAGAGGAGATGCTTCAAGAGGCTGCCAGCCT...CAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp ATTCTGAGTTGTGTCACACAGGCTTTGACAATTAATGATGTACTAAAATGGGAAGAGTCCAGGAAGTGCTaGCGCCAGCGGCTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ILSCVTQALTINDVLKWEESRKC*RQRLSS
Trigger: GCTGGAGAGCCGCTGGCGTCAGCACTTCCTGGACTC...TTCCCATTTTAGTACATCATTAATTGTCAAAGCCTGTGTGACACAACTCAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp AGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGTTCCGGAGCAGCTTCTaGTGGTTGTGGTCCACTGAC +
Preference number: 4 (lower is better)
Translates to: RRGRVKIKAKASLVHKNEFRSSF*WLWSTD
Trigger: GTCAGTGGACCACAACCATCAGAAGCTGCTCCGGAA...CTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp TTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCTCCTAACAGGACCGATATGGATCCCAACCACATaGGTTACGGGAGAGCATGAA +
Preference number: 4 (lower is better)
Translates to: FTSPAFGRTFSPLLTGPIWIPTT*VTGEHE
Trigger: TTCATGCTCTCCCGTAACTCATGTGGTTGGGATCCA...TATCGGTCCTGTTAGGAGGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR TCA 90 bp GGACAGCCCCTGTTAGAGATAAACCGAGGCACTAGACAAGGAAGAAATGCATTATGGATCCCAACCACATaGGTTACGGGAGAGCATGAA +
Preference number: 4 (lower is better)
Translates to: GQPLLEINRGTRQGRNALWIPTT*VTGEHE
Trigger: TTCATGCTCTCCCGTAACTCATGTGGTTGGGATCCA...TAATGCATTTCTTCCTTGTCTAGTGCCTCGGTTTATCTCTAACAGGGGCTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR TCA 90 bp GGACAGCCCCTGTTAGAGATAAACCGAGGCACTAGACAAGGAAGAAATGCATTAGTACGTGAAGTAGACTaGAGTGACCCAGATGGGATG +
Preference number: 4 (lower is better)
Translates to: GQPLLEINRGTRQGRNALVREVD*SDPDGM
Trigger: CATCCCATCTGGGTCACTTCAGTCTACTTCACGTAC...TAATGCATTTCTTCCTTGTCTAGTGCCTCGGTTTATCTCTAACAGGGGCTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR TCA 90 bp TTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCTCCTAACAGGACCGATACCTCATATTGCAACCTaGCCAGATGACTCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: FTSPAFGRTFSPLLTGPIPHIAT*PDDSGS
Trigger: ACTCCCAGAGTCATCTGGTCAGGTTGCAATATGAGG...TATCGGTCCTGTTAGGAGGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR TCA 90 bp CCCCAGCAATGTGAATCCCCCTCTTCACAGTCCAATTCTAAGATTCCATTCTTATCCTATGAAGCCCAGTaGCTATGCTGGGACACTGGA +
Preference number: 4 (lower is better)
Translates to: PQQCESPSSQSNSKIPFLSYEAQ*LCWDTG
Trigger: TCCAGTGTCCCAGCATAGTCACTGGGCTTCATAGGA...TAAGAATGGAATCTTAGAATTGGACTGTGAAGAGGGGGATTCACATTGCTGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR GCA 90 bp AGAATTCTTCATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATTTCGGCGGCGCTGGATaGCTTTCCAGAGGACAAACC +
Preference number: 4 (lower is better)
Translates to: RILHFSSAQGQQKRESKNFGGAG*LSRGQT
Trigger: GGTTTGTCCTCTGGAAAGGCATCCAGCGCCGCCGAA...ATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAATGAAGAATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409949.5
CDS-3UTR GCA 90 bp CAAAACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGTTCGGCGGCGCTGGATaGCTTTCCAGAGGACAAACC +
Preference number: 4 (lower is better)
Translates to: QNHKLSFKQYLCSSRSILFGGAG*LSRGQT
Trigger: GGTTTGTCCTCTGGAAAGGCATCCAGCGCCGCCGAA...CAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409949.5
CDS-3UTR GCA 90 bp ACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATCTGCCCAGCACTTTCTaGTGTGGCTGTTGGGTCACA +
Preference number: 4 (lower is better)
Translates to: TINSPSNNIFAPAEASWDLPSTF*CGCWVT
Trigger: TGTGACCCAACAGCCACAGCAGAAAGTGCTGGGCAG...ATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409949.5
CDS-3UTR GCA 90 bp AGAATTCTTCATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATGGGGCAGCTCTCTACTaGCCAGCACTTTCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: RILHFSSAQGQQKRESKNGAALY*PALSAV
Trigger: CACAGCAGAAAGTGCTGGGCAGTAGAGAGCTGCCCC...ATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAATGAAGAATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409949.5
CDS-3UTR GCA 90 bp CATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATTAGGGGCAGCTCTCTACTaGCCAGCACTTTCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: HKLSFKQYLCSSRSILGLGAALY*PALSAV
Trigger: CACAGCAGAAAGTGCTGGGCAGTAGAGAGCTGCCCC...TAATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409949.5
CDS-3UTR GCA 90 bp GGACAGCCCCTGTTAGAGATAAACCGAGGCACTAGACAAGGAAGAAATGCATTACAGCATCCCAGTTGCTaGAACGAAGTAGAAGGGACT +
Preference number: 4 (lower is better)
Translates to: GQPLLEINRGTRQGRNALQHPSC*NEVEGT
Trigger: AGTCCCTTCTACTTCGTTGCAGCAACTGGGATGCTG...TAATGCATTTCTTCCTTGTCTAGTGCCTCGGTTTATCTCTAACAGGGGCTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp TCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCATCTGCTCATTCCTTTaGTTCGAAATGGGATGTCGA +
Preference number: 4 (lower is better)
Translates to: SSAQGQQKRESKNKGEGLICSFL*FEMGCR
Trigger: TCGACATCCCATTTCGAAGCAAAGGAATGAGCAGAT...GAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp AAGCTAAAAATCTTGCAGTTCTGGGGCAGGAGGAGTGCAACAAGCAGGCAACAATTCTTCTATCACAAGTaGAGAGGGGCTGTCCATCAG +
Preference number: 4 (lower is better)
Translates to: KLKILQFWGRRSATSRQQFFYHK*RGAVHQ
Trigger: CTGATGGACAGCCCCTCTGCACTTGTGATAGAAGAA...TTGTTGCCTGCTTGTTGCACTCCTCCTGCCCCAGAACTGCAAGATTTTTAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR GCA 90 bp AATGTATTAAGTAAGCTCAGTGTCCCAGGCTTCAGAGGAGACAGAGAAGTCCTCTCACCAGCTCACCAATaGCTTTGTCCAGGTACCACT +
Preference number: 4 (lower is better)
Translates to: NVLSKLSVPGFRGDREVLSPAHQ*LCPGTT
Trigger: AGTGGTACCTGGACAAAGGCATTGGTGAGCTGGTGA...GAGGACTTCTCTGTCTCCTCTGAAGCCTGGGACACTGAGCTTACTTAATACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR GCA 90 bp TTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCTCCTAACAGGACCGATATCACCAGCTCACCAATaGCTTTGTCCAGGTACCACT +
Preference number: 4 (lower is better)
Translates to: FTSPAFGRTFSPLLTGPISPAHQ*LCPGTT
Trigger: AGTGGTACCTGGACAAAGGCATTGGTGAGCTGGTGA...TATCGGTCCTGTTAGGAGGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR GCA 90 bp AAGCTAAAAATCTTGCAGTTCTGGGGCAGGAGGAGTGCAACAAGCAGGCAACAATGTAGGAGTCTCTCTTaGCACACACTACACACAGGT +
Preference number: 4 (lower is better)
Translates to: KLKILQFWGRRSATSRQQCRSLS*HTLHTG
Trigger: ACCTGTGTGTAGTGTGTGGCAAGAGAGACTCCTACA...TTGTTGCCTGCTTGTTGCACTCCTCCTGCCCCAGAACTGCAAGATTTTTAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR GCA 90 bp GGACAGCCCCTGTTAGAGATAAACCGAGGCACTAGACAAGGAAGAAATGCATTAATCTCGATGGGGAAGTaGTTCCGGTACTCATGTGGA +
Preference number: 4 (lower is better)
Translates to: GQPLLEINRGTRQGRNALISMGK*FRYSCG
Trigger: TCCACATGAGTACCGGAAGCACTTCCCCATCGAGAT...TAATGCATTTCTTCCTTGTCTAGTGCCTCGGTTTATCTCTAACAGGGGCTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp TTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCTCCTAACAGGACCGATAAACTCCTTGGCCAGCTaGTGCTTCAGATGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: FTSPAFGRTFSPLLTGPINSLAS*CFRWLS
Trigger: TGACAACCATCTGAAGCAGCAGCTGGCCAAGGAGTT...TATCGGTCCTGTTAGGAGGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR GCA 90 bp ATTCTGAGTTGTGTCACACAGGCTTTGACAATTAATGATGTACTAAAATGGGAAGCCCCAGAACGCACCTaGCGGCGCTCAGGATCTTCC +
Preference number: 4 (lower is better)
Translates to: ILSCVTQALTINDVLKWEAPERT*RRSGSS
Trigger: GGAAGATCCTGAGCGCCGGCAGGTGCGTTCTGGGGC...TTCCCATTTTAGTACATCATTAATTGTCAAAGCCTGTGTGACACAACTCAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp AGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGAGGAACTCTCTGAGTGCTTaGAGCAGCTCCTCCTTTCGC +
Preference number: 4 (lower is better)
Translates to: RGRVKIKAKASLVHKNERNSLSA*SSSSFR
Trigger: GCGAAAGGAGGAGCTGCTGCAAGCACTCAGAGAGTT...CCTCTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp AGTCGCGAAGTTTTACATTTACATCCAGTGAGCCTTGTGCTTACAAGTAGTTTTGGCAGGTGCTTGGGCTaGATGGAGTCCAGGAAGTGC +
Preference number: 4 (lower is better)
Translates to: SREVLHLHPVSLVLTSSFGRCLG*MESRKC
Trigger: GCACTTCCTGGACTCCATGCAGCCCAAGCACCTGCC...AAAACTACTTGTAAGCACAAGGCTCACTGGATGTAAATGTAAAACTTCGCGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR GCA 90 bp CTTTGGAAGAACTTTTTCTCCCCTCCTAACAGGACCGATATACTGGACAGCCCCACCCACTACAGTGAATaGACATTCCTCAAAGTGGCT +
Preference number: 4 (lower is better)
Translates to: LWKNFFSPPNRTDILDSPTHYSE*TFLKVA
Trigger: AGCCACTTTGAGGAATGTGCATTCACTGTAGTGGGT...GGGGCTGTCCAGTATATCGGTCCTGTTAGGAGGGGAGAAAAAGTTCTTCCAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR GCA 90 bp TCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCACAGAGGGCTGGCTTTaGCTTCCAAATTTACTACTA +
Preference number: 4 (lower is better)
Translates to: SSAQGQQKRESKNKGEGLTEGWL*LPNLLL
Trigger: TAGTAGTAAATTTGGAAGGCAAAGCCAGCCCTCTGT...GAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409014.5
CDS-3UTR CCA 90 bp ATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGTCCTTTTTAGCTGACTaGGACACGCAGCCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: IFPLHRDSRRGRVKIKAKSFLAD*DTQPRR
Trigger: CCTTCGAGGCTGCGTGTCCCAGTCAGCTAAAAAGGA...CTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000312994.9
ENST00000409242.5
ENST00000409949.5
CDS-3UTR CCA 90 bp AGTCGCGAAGTTTTACATTTACATCCAGTGAGCCTTGTGCTTACAAGTAGTTTTCTCCTTCGGCGGCGCTaGATGCCTTTCCAGAGGACA +
Preference number: 4 (lower is better)
Translates to: SREVLHLHPVSLVLTSSFLLRRR*MPFQRT
Trigger: TGTCCTCTGGAAAGGCATCCAGCGCCGCCGAAGGAG...AAAACTACTTGTAAGCACAAGGCTCACTGGATGTAAATGTAAAACTTCGCGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR CCA 90 bp ATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGAGGATCTGGGGGCACTaGAGTGCAGCTGATCATCTT +
Preference number: 4 (lower is better)
Translates to: IFPLHRDSRRGRVKIKAKRIWGH*SAADHL
Trigger: AAGATGATCAGCTGCACTCCAGTGCCCCCAGATCCT...CTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409949.5
CDS-3UTR CCA 90 bp GCTGTTTGGTCCTGGAAGTGTAAAGGAAAGCCTTTTCAAGTACGTGAAGTAGACCTCCACAGATTAGCTTaGGCAGGCGAACCAAGACAC +
Preference number: 4 (lower is better)
Translates to: AVWSWKCKGKPFQVREVDLHRLA*AGEPRH
Trigger: GTGTCTTGGTTCGCCTGCCCAAGCTAATCTGTGGAG...GTCTACTTCACGTACTTGAAAAGGCTTTCCTTTACACTTCCAGGACCAAACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp CCCCAGCAATGTGAATCCCCCTCTTCACAGTCCAATTCTAAGATTCCATTCTTACCTGCAGAAGCTTGCTaGCATCTTCTGAGCATCCCA +
Preference number: 4 (lower is better)
Translates to: PQQCESPSSQSNSKIPFLPAEAC*HLLSIP
Trigger: TGGGATGCTCAGAAGATGCCAGCAAGCTTCTGCAGG...TAAGAATGGAATCTTAGAATTGGACTGTGAAGAGGGGGATTCACATTGCTGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR CCA 90 bp ATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGCCTGCAGAAGCTTGCTaGCATCTTCTGAGCATCCCA +
Preference number: 4 (lower is better)
Translates to: IFPLHRDSRRGRVKIKAKPAEAC*HLLSIP
Trigger: TGGGATGCTCAGAAGATGCCAGCAAGCTTCTGCAGG...CTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp TCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCATGTCGACCACACCCTaGCATTTTTCCAAGACTTTT +
Preference number: 4 (lower is better)
Translates to: SSAQGQQKRESKNKGEGLMSTTP*HFSKTF
Trigger: AAAAGTCTTGGAAAAATGCCAGGGTGTGGTCGACAT...GAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp ACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATCCCTTGGTGGTTGCCTaGCACCATCCCATCCATCTT +
Preference number: 4 (lower is better)
Translates to: TINSPSNNIFAPAEASWDPLVVA*HHPIHL
Trigger: AAGATGGATGGGATGGTGCCAGGCAACCACCAAGGG...ATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp TCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTTCTTTTATGTTTTCTaGGGTCTCTCCCTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: SSAQGQQKRESKNKGEGLFFYVF*GLSLGG
Trigger: ACCACCAAGGGAGAGACCCCAGAAAACATAAAAGAA...GAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp AGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGAGGGGTCCTTCATCTCGATaGGGAAGTGCTTCCGGTACT +
Preference number: 4 (lower is better)
Translates to: RGRVKIKAKASLVHKNERGPSSR*GSASGT
Trigger: AGTACCGGAAGCACTTCCCCATCGAGATGAAGGACC...CCTCTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp GCTGTTTGGTCCTGGAAGTGTAAAGGAAAGCCTTTTCAAGTACGTGAAGTAGACGGTCCTTCATCTCGATaGGGAAGTGCTTCCGGTACT +
Preference number: 4 (lower is better)
Translates to: AVWSWKCKGKPFQVREVDGPSSR*GSASGT
Trigger: AGTACCGGAAGCACTTCCCCATCGAGATGAAGGACC...GTCTACTTCACGTACTTGAAAAGGCTTTCCTTTACACTTCCAGGACCAAACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp ATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGACATCGTGGGAGTTGTaGTCCTTCATCTCGATGGGG +
Preference number: 4 (lower is better)
Translates to: IFPLHRDSRRGRVKIKAKTSWEL*SFISMG
Trigger: CCCCATCGAGATGAAGGACCACAACTCCCACGATGT...CTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp GCTGTTTGGTCCTGGAAGTGTAAAGGAAAGCCTTTTCAAGTACGTGAAGTAGACTTCTGGTCTCCAGGCTaGCAGCCTCTTGAAGCATCT +
Preference number: 4 (lower is better)
Translates to: AVWSWKCKGKPFQVREVDFWSPG*QPLEAS
Trigger: AGATGCTTCAAGAGGCTGCCAGCCTGGAGACCAGAA...GTCTACTTCACGTACTTGAAAAGGCTTTCCTTTACACTTCCAGGACCAAACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp AGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGAGGTTCTGGTCTCCAGGCTaGCAGCCTCTTGAAGCATCT +
Preference number: 4 (lower is better)
Translates to: RGRVKIKAKASLVHKNERFWSPG*QPLEAS
Trigger: AGATGCTTCAAGAGGCTGCCAGCCTGGAGACCAGAA...CCTCTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp TCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCGAACATAGTTTTCATTaGAGATTCTGGTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: SSAQGQQKRESKNKGEGLEHSFH*RFWSPG
Trigger: GCCTGGAGACCAGAATCTCCAATGAAAACTATGTTC...GAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp ATAAATTTGACTCCTTGTTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCGGTGCTTGGGCTGCATaGAGTCCAGGAAGTGCTGAC +
Preference number: 4 (lower is better)
Translates to: INLTPCSLLQPLEELFLPGAWAA*SPGSAD
Trigger: GTCAGCACTTCCTGGACTCCATGCAGCCCAAGCACC...GGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAACAAGGAGTCAAATTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp AAGATAACATTACTCTCAGAAAGGGGTGAAGCTAAAAATCTTGCAGTTCTGGGGGTGCACGTGGGTTCATaGGCTGCTACTGATGGCCGA +
Preference number: 4 (lower is better)
Translates to: KITLLSERGEAKNLAVLGVHVGS*AATDGR
Trigger: TCGGCCATCAGTAGCAGCCCATGAACCCACGTGCAC...CCCCAGAACTGCAAGATTTTTAGCTTCACCCCTTTCTGAGAGTAATGTTATCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR CCA 90 bp AGTCGCGAAGTTTTACATTTACATCCAGTGAGCCTTGTGCTTACAAGTAGTTTTGCTCTCCTCCACTCCTaGGCTCCGCATAACACAGCC +
Preference number: 4 (lower is better)
Translates to: SREVLHLHPVSLVLTSSFALLHS*APHNTA
Trigger: GGCTGTGTTATGCGGAGCCCAGGAGTGGAGGAGAGC...AAAACTACTTGTAAGCACAAGGCTCACTGGATGTAAATGTAAAACTTCGCGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR TCA 90 bp GCTGTTTGGTCCTGGAAGTGTAAAGGAAAGCCTTTTCAAGTACGTGAAGTAGACCTTGCTGGCATCTTCTaGGCATCCCACTCCAACTTT +
Preference number: 4 (lower is better)
Translates to: AVWSWKCKGKPFQVREVDLAGIF*ASHSNF
Trigger: AAAGTTGGAGTGGGATGCTCAGAAGATGCCAGCAAG...GTCTACTTCACGTACTTGAAAAGGCTTTCCTTTACACTTCCAGGACCAAACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR TCA 90 bp ACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATTTACCTGGTCCTCTGTaGGAGTCTCAGCATCCCAGT +
Preference number: 4 (lower is better)
Translates to: TINSPSNNIFAPAEASWDLPGPL*ESQHPS
Trigger: ACTGGGATGCTGAGACTCTCACAGAGGACCAGGTAA...ATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp ATTCTGAGTTGTGTCACACAGGCTTTGACAATTAATGATGTACTAAAATGGGAAAGCTCCTCCTTTCGCTaGGTAGGCAGGCTCTCCGCG +
Preference number: 4 (lower is better)
Translates to: ILSCVTQALTINDVLKWESSSFR*VGRLSA
Trigger: CGCGGAGAGCCTGCCTACTCAGCGAAAGGAGGAGCT...TTCCCATTTTAGTACATCATTAATTGTCAAAGCCTGTGTGACACAACTCAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp AAGCTAAAAATCTTGCAGTTCTGGGGCAGGAGGAGTGCAACAAGCAGGCAACAAGAAGCATCTCCTCTGTaGCCACGTCTGTGTTATAAA +
Preference number: 4 (lower is better)
Translates to: KLKILQFWGRRSATSRQQEASPL*PRLCYK
Trigger: TTTATAACACAGACGTGGTCACAGAGGAGATGCTTC...TTGTTGCCTGCTTGTTGCACTCCTCCTGCCCCAGAACTGCAAGATTTTTAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR TCA 90 bp AGAATTCTTCATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATTTCCGGAGCAGCTTCTaGTGGTTGTGGTCCACTGAC +
Preference number: 4 (lower is better)
Translates to: RILHFSSAQGQQKRESKNFRSSF*WLWSTD
Trigger: GTCAGTGGACCACAACCATCAGAAGCTGCTCCGGAA...ATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAATGAAGAATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp CCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTAATGGCCTAACATTTTaGAAGATGAAACAACGCTCC +
Preference number: 4 (lower is better)
Translates to: PLHRDSRRGRVKIKAKASNGLTF*KMKQRS
Trigger: GGAGCGTTGTTTCATCTTTCAAAATGTTAGGCCATT...AGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR TCA 90 bp TCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCCTACCCTCAAATCTCTaGTTTAAGACGACAATTGTC +
Preference number: 4 (lower is better)
Translates to: SSAQGQQKRESKNKGEGLLPSNL*FKTTIV
Trigger: GACAATTGTCGTCTTAAATCAGAGATTTGAGGGTAG...GAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR GCA 90 bp AGAATTCTTCATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATCTGCCCAGCACTTTCTaGTGTGGCTGTTGGGTCACA +
Preference number: 4 (lower is better)
Translates to: RILHFSSAQGQQKRESKNLPSTF*CGCWVT
Trigger: TGTGACCCAACAGCCACAGCAGAAAGTGCTGGGCAG...ATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAATGAAGAATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409949.5
CDS-3UTR GCA 90 bp TTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCTCCTAACAGGACCGATACACCGTCACCACCTTTaGTTTAAGGATCCGTTCCTT +
Preference number: 4 (lower is better)
Translates to: FTSPAFGRTFSPLLTGPIHRHHL*FKDPFL
Trigger: AAGGAACGGATCCTTAAAGCAAAGGTGGTGACGGTG...TATCGGTCCTGTTAGGAGGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
CDS-3UTR GCA 90 bp GGACAGCCCCTGTTAGAGATAAACCGAGGCACTAGACAAGGAAGAAATGCATTAAGCAAATTGTTTCTCTaGCGCATGGCTAGGTATCGG +
Preference number: 4 (lower is better)
Translates to: GQPLLEINRGTRQGRNALSKLFL*RMARYR
Trigger: CCGATACCTAGCCATGCGGCAGAGAAACAATTTGCT...TAATGCATTTCTTCCTTGTCTAGTGCCTCGGTTTATCTCTAACAGGGGCTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp ATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGTCTCAGCATCCCAGTTaGTGCAACGAAGTAGAAGGG +
Preference number: 4 (lower is better)
Translates to: IFPLHRDSRRGRVKIKAKSQHPS*CNEVEG
Trigger: CCCTTCTACTTCGTTGCAGCAACTGGGATGCTGAGA...CTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp AGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGAGGTCTCAGCATCCCAGTTaGTGCAACGAAGTAGAAGGG +
Preference number: 4 (lower is better)
Translates to: RGRVKIKAKASLVHKNERSQHPS*CNEVEG
Trigger: CCCTTCTACTTCGTTGCAGCAACTGGGATGCTGAGA...CCTCTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp AAGCTAAAAATCTTGCAGTTCTGGGGCAGGAGGAGTGCAACAAGCAGGCAACAACCTCTTCTCCCAATCTaGTCATTCCTTTGCTTCGAA +
Preference number: 4 (lower is better)
Translates to: KLKILQFWGRRSATSRQQPLLPI*SFLCFE
Trigger: TTCGAAGCAAAGGAATGAGCAGATTGGGAGAAGAGG...TTGTTGCCTGCTTGTTGCACTCCTCCTGCCCCAGAACTGCAAGATTTTTAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR GCA 90 bp AATGTATTAAGTAAGCTCAGTGTCCCAGGCTTCAGAGGAGACAGAGAAGTCCTCTGTAGGAGTCTCTCTTaGCACACACTACACACAGGT +
Preference number: 4 (lower is better)
Translates to: NVLSKLSVPGFRGDREVLCRSLS*HTLHTG
Trigger: ACCTGTGTGTAGTGTGTGGCAAGAGAGACTCCTACA...GAGGACTTCTCTGTCTCCTCTGAAGCCTGGGACACTGAGCTTACTTAATACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR GCA 90 bp ATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGAACTCCTTGGCCAGCTaGTGCTTCAGATGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: IFPLHRDSRRGRVKIKAKNSLAS*CFRWLS
Trigger: TGACAACCATCTGAAGCAGCAGCTGGCCAAGGAGTT...CTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp ATTCTGAGTTGTGTCACACAGGCTTTGACAATTAATGATGTACTAAAATGGGAACACTGCTGGGGCAGGTaGTTGGGCTGCATGGAGTCC +
Preference number: 4 (lower is better)
Translates to: ILSCVTQALTINDVLKWEHCWGR*LGCMES
Trigger: GGACTCCATGCAGCCCAAGCACCTGCCCCAGCAGTG...TTCCCATTTTAGTACATCATTAATTGTCAAAGCCTGTGTGACACAACTCAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp AAGCTAAAAATCTTGCAGTTCTGGGGCAGGAGGAGTGCAACAAGCAGGCAACAATGTCTGGTATATCCATaGACACATACCATGGCACTG +
Preference number: 4 (lower is better)
Translates to: KLKILQFWGRRSATSRQQCLVYP*THTMAL
Trigger: CAGTGCCATGGTATGTGTGCATGGATATACCAGACA...TTGTTGCCTGCTTGTTGCACTCCTCCTGCCCCAGAACTGCAAGATTTTTAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR GCA 90 bp AGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGAATGATCAGGGAGCATaGAGAGAGGCCCTTGCTGTG +
Preference number: 4 (lower is better)
Translates to: RRGRVKIKAKASLVHKNENDQGA*REALAV
Trigger: CACAGCAAGGGCCTCTCTGCATGCTCCCTGATCATT...CTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR CCA 90 bp AGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGTCCTTTTTAGCTGACTaGGACACGCAGCCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: RRGRVKIKAKASLVHKNESFLAD*DTQPRR
Trigger: CCTTCGAGGCTGCGTGTCCCAGTCAGCTAAAAAGGA...CTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000312994.9
ENST00000409242.5
ENST00000409949.5
CDS-3UTR CCA 90 bp TTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCTCCTAACAGGACCGATATTCTGCTGTGGCTGTTaGGTCACAGGACTCGTTTTA +
Preference number: 4 (lower is better)
Translates to: FTSPAFGRTFSPLLTGPIFCCGC*VTGLVL
Trigger: TAAAACGAGTCCTGTGACCCAACAGCCACAGCAGAA...TATCGGTCCTGTTAGGAGGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
CDS-3UTR CCA 90 bp AGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGCAGCACTTTCTGCTGTaGCTGTTGGGTCACAGGACT +
Preference number: 4 (lower is better)
Translates to: RRGRVKIKAKASLVHKNEQHFLL*LLGHRT
Trigger: AGTCCTGTGACCCAACAGCCACAGCAGAAAGTGCTG...CTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409949.5
CDS-3UTR CCA 90 bp ACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATCTCCACAGATTAGCTTaGGCAGGCGAACCAAGACAC +
Preference number: 4 (lower is better)
Translates to: TINSPSNNIFAPAEASWDLHRLA*AGEPRH
Trigger: GTGTCTTGGTTCGCCTGCCCAAGCTAATCTGTGGAG...ATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp ACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATTGTTTCTCTGCCGCATaGCTAGGTATCGGAGGTCCA +
Preference number: 4 (lower is better)
Translates to: TINSPSNNIFAPAEASWDCFSAA*LGIGGP
Trigger: TGGACCTCCGATACCTAGCCATGCGGCAGAGAAACA...ATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp ATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGTCCTTTGCTTCGAAATaGGATGTCGACCACACCCTG +
Preference number: 4 (lower is better)
Translates to: IFPLHRDSRRGRVKIKAKSFASK*DVDHTL
Trigger: CAGGGTGTGGTCGACATCCCATTTCGAAGCAAAGGA...CTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp GGACAGCCCCTGTTAGAGATAAACCGAGGCACTAGACAAGGAAGAAATGCATTAAAAGAGGTGATTTTCTaGCAGAATAGCCCACCCCCA +
Preference number: 4 (lower is better)
Translates to: GQPLLEINRGTRQGRNALKEVIF*QNSPPP
Trigger: TGGGGGTGGGCTATTCTGCCAGAAAATCACCTCTTT...TAATGCATTTCTTCCTTGTCTAGTGCCTCGGTTTATCTCTAACAGGGGCTGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp ACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATGGTCCTTCATCTCGATaGGGAAGTGCTTCCGGTACT +
Preference number: 4 (lower is better)
Translates to: TINSPSNNIFAPAEASWDGPSSR*GSASGT
Trigger: AGTACCGGAAGCACTTCCCCATCGAGATGAAGGACC...ATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp AGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGACATCGTGGGAGTTGTaGTCCTTCATCTCGATGGGG +
Preference number: 4 (lower is better)
Translates to: RRGRVKIKAKASLVHKNETSWEL*SFISMG
Trigger: CCCCATCGAGATGAAGGACCACAACTCCCACGATGT...CTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp GCTGTTTGGTCCTGGAAGTGTAAAGGAAAGCCTTTTCAAGTACGTGAAGTAGACTTTCATTGGAGATTCTaGTCTCCAGGCTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: AVWSWKCKGKPFQVREVDFHWRF*SPGWQP
Trigger: AGGCTGCCAGCCTGGAGACCAGAATCTCCAATGAAA...GTCTACTTCACGTACTTGAAAAGGCTTTCCTTTACACTTCCAGGACCAAACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp ATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGTTTCATTGGAGATTCTaGTCTCCAGGCTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: IFPLHRDSRRGRVKIKAKFHWRF*SPGWQP
Trigger: AGGCTGCCAGCCTGGAGACCAGAATCTCCAATGAAA...CTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp AGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGAGGTTTCATTGGAGATTCTaGTCTCCAGGCTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: RGRVKIKAKASLVHKNERFHWRF*SPGWQP
Trigger: AGGCTGCCAGCCTGGAGACCAGAATCTCCAATGAAA...CCTCTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp ATTCTGAGTTGTGTCACACAGGCTTTGACAATTAATGATGTACTAAAATGGGAAGCTGGGGCAGGTGCTTaGGCTGCATGGAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: ILSCVTQALTINDVLKWEAGAGA*AAWSPG
Trigger: TCCTGGACTCCATGCAGCCCAAGCACCTGCCCCAGC...TTCCCATTTTAGTACATCATTAATTGTCAAAGCCTGTGTGACACAACTCAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp CCCCAGCAATGTGAATCCCCCTCTTCACAGTCCAATTCTAAGATTCCATTCTTAAGCTATCAAGACAGCTaGATGGGAAGATCTTCCCCG +
Preference number: 4 (lower is better)
Translates to: PQQCESPSSQSNSKIPFLSYQDS*MGRSSP
Trigger: CGGGGAAGATCTTCCCATCCAGCTGTCTTGATAGCT...TAAGAATGGAATCTTAGAATTGGACTGTGAAGAGGGGGATTCACATTGCTGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR CCA 90 bp AGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGAGGAGCTATCAAGACAGCTaGATGGGAAGATCTTCCCCG +
Preference number: 4 (lower is better)
Translates to: RGRVKIKAKASLVHKNERSYQDS*MGRSSP
Trigger: CGGGGAAGATCTTCCCATCCAGCTGTCTTGATAGCT...CCTCTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp TTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCTCCTAACAGGACCGATAACAGGACCGATATACTaGACAGCCCCTGTTAGAGAT +
Preference number: 4 (lower is better)
Translates to: FTSPAFGRTFSPLLTGPITGPIY*TAPVRD
Trigger: ATCTCTAACAGGGGCTGTCCAGTATATCGGTCCTGT...TATCGGTCCTGTTAGGAGGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp ACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATGGGAGATGGAGTTTGTaGTTCTTTCTGCCCCACCCA +
Preference number: 4 (lower is better)
Translates to: TINSPSNNIFAPAEASWDGRWSL*FFLPHP
Trigger: TGGGTGGGGCAGAAAGAACCACAAACTCCATCTCCC...ATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR TCA 90 bp ACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATCTTGCTGGCATCTTCTaGGCATCCCACTCCAACTTT +
Preference number: 4 (lower is better)
Translates to: TINSPSNNIFAPAEASWDLAGIF*ASHSNF
Trigger: AAAGTTGGAGTGGGATGCTCAGAAGATGCCAGCAAG...ATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp ATAAATTTGACTCCTTGTTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCTTACCTGGTCCTCTGTaGGAGTCTCAGCATCCCAGT +
Preference number: 4 (lower is better)
Translates to: INLTPCSLLQPLEELFLPLPGPL*ESQHPS
Trigger: ACTGGGATGCTGAGACTCTCACAGAGGACCAGGTAA...GGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAACAAGGAGTCAAATTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR TCA 90 bp AGAATTCTTCATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATTTACCTGGTCCTCTGTaGGAGTCTCAGCATCCCAGT +
Preference number: 4 (lower is better)
Translates to: RILHFSSAQGQQKRESKNLPGPL*ESQHPS
Trigger: ACTGGGATGCTGAGACTCTCACAGAGGACCAGGTAA...ATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAATGAAGAATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp AAGATAACATTACTCTCAGAAAGGGGTGAAGCTAAAAATCTTGCAGTTCTGGGGAAGAAAGAGAGCCACTaGAATCTGGGCATCCCTGGC +
Preference number: 4 (lower is better)
Translates to: KITLLSERGEAKNLAVLGKKESH*NLGIPG
Trigger: GCCAGGGATGCCCAGATTTCAGTGGCTCTCTTTCTT...CCCCAGAACTGCAAGATTTTTAGCTTCACCCCTTTCTGAGAGTAATGTTATCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR TCA 90 bp GGACAGCCCCTGTTAGAGATAAACCGAGGCACTAGACAAGGAAGAAATGCATTAGAAGCATCTCCTCTGTaGCCACGTCTGTGTTATAAA +
Preference number: 4 (lower is better)
Translates to: GQPLLEINRGTRQGRNALEASPL*PRLCYK
Trigger: TTTATAACACAGACGTGGTCACAGAGGAGATGCTTC...TAATGCATTTCTTCCTTGTCTAGTGCCTCGGTTTATCTCTAACAGGGGCTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp ATTCTGAGTTGTGTCACACAGGCTTTGACAATTAATGATGTACTAAAATGGGAAATGGTTGTGGTCCACTaGCCACTGCTGGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: ILSCVTQALTINDVLKWEMVVVH*PLLGQV
Trigger: CACCTGCCCCAGCAGTGGTCAGTGGACCACAACCAT...TTCCCATTTTAGTACATCATTAATTGTCAAAGCCTGTGTGACACAACTCAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp AGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGCCTCATATTGCAACCTaGCCAGATGACTCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: RRGRVKIKAKASLVHKNEPHIAT*PDDSGS
Trigger: ACTCCCAGAGTCATCTGGTCAGGTTGCAATATGAGG...CTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR TCA 90 bp CCCCAGCAATGTGAATCCCCCTCTTCACAGTCCAATTCTAAGATTCCATTCTTAGAAGACAAGTGGGAATaGAGGGTCAGAAGAGCAAGA +
Preference number: 4 (lower is better)
Translates to: PQQCESPSSQSNSKIPFLEDKWE*RVRRAR
Trigger: TCTTGCTCTTCTGACCCTTCATTCCCACTTGTCTTC...TAAGAATGGAATCTTAGAATTGGACTGTGAAGAGGGGGATTCACATTGCTGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR GCA 90 bp AGTCGCGAAGTTTTACATTTACATCCAGTGAGCCTTGTGCTTACAAGTAGTTTTCTGCCCAGCACTTTCTaGTGTGGCTGTTGGGTCACA +
Preference number: 4 (lower is better)
Translates to: SREVLHLHPVSLVLTSSFLPSTF*CGCWVT
Trigger: TGTGACCCAACAGCCACAGCAGAAAGTGCTGGGCAG...AAAACTACTTGTAAGCACAAGGCTCACTGGATGTAAATGTAAAACTTCGCGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR GCA 90 bp ATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGCACCGTCACCACCTTTaGTTTAAGGATCCGTTCCTT +
Preference number: 4 (lower is better)
Translates to: IFPLHRDSRRGRVKIKAKHRHHL*FKDPFL
Trigger: AAGGAACGGATCCTTAAAGCAAAGGTGGTGACGGTG...CTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409949.5
CDS-3UTR GCA 90 bp CATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATTAGATTTGATCCCACTCTaGCTCCTGAGACACCGTCAC +
Preference number: 4 (lower is better)
Translates to: HKLSFKQYLCSSRSILGLDLIPL*LLRHRH
Trigger: GTGACGGTGTCTCAGGAGGCAGAGTGGGATCAAATC...TAATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409949.5
CDS-3UTR GCA 90 bp AGAATTCTTCATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATGATTTGATCCCACTCTaGCTCCTGAGACACCGTCAC +
Preference number: 4 (lower is better)
Translates to: RILHFSSAQGQQKRESKNDLIPL*LLRHRH
Trigger: GTGACGGTGTCTCAGGAGGCAGAGTGGGATCAAATC...ATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAATGAAGAATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409949.5
CDS-3UTR GCA 90 bp CCCCAGCAATGTGAATCCCCCTCTTCACAGTCCAATTCTAAGATTCCATTCTTAACAGAGGGCTGGCTTTaGCTTCCAAATTTACCCACT +
Preference number: 4 (lower is better)
Translates to: PQQCESPSSQSNSKIPFLTEGWL*LPNLPT
Trigger: AGTGGGTAAATTTGGAAGGCAAAGCCAGCCCTCTGT...TAAGAATGGAATCTTAGAATTGGACTGTGAAGAGGGGGATTCACATTGCTGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR GCA 90 bp GCTGTTTGGTCCTGGAAGTGTAAAGGAAAGCCTTTTCAAGTACGTGAAGTAGACAATCCTGCAGAAGCTTaGTGGCATCTTCTGAGCATC +
Preference number: 4 (lower is better)
Translates to: AVWSWKCKGKPFQVREVDNPAEA*WHLLSI
Trigger: GATGCTCAGAAGATGCCAGCAAGCTTCTGCAGGATT...GTCTACTTCACGTACTTGAAAAGGCTTTCCTTTACACTTCCAGGACCAAACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR GCA 90 bp AGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGAGGAATCCTGCAGAAGCTTaGTGGCATCTTCTGAGCATC +
Preference number: 4 (lower is better)
Translates to: RGRVKIKAKASLVHKNERNPAEA*WHLLSI
Trigger: GATGCTCAGAAGATGCCAGCAAGCTTCTGCAGGATT...CCTCTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp CCCCAGCAATGTGAATCCCCCTCTTCACAGTCCAATTCTAAGATTCCATTCTTAAGCAAATTGTTTCTCTaGCGCATGGCTAGGTATCGG +
Preference number: 4 (lower is better)
Translates to: PQQCESPSSQSNSKIPFLSKLFL*RMARYR
Trigger: CCGATACCTAGCCATGCGGCAGAGAAACAATTTGCT...TAAGAATGGAATCTTAGAATTGGACTGTGAAGAGGGGGATTCACATTGCTGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR GCA 90 bp AGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGCAGCATCCCAGTTGCTaGAACGAAGTAGAAGGGACT +
Preference number: 4 (lower is better)
Translates to: RRGRVKIKAKASLVHKNEQHPSC*NEVEGT
Trigger: AGTCCCTTCTACTTCGTTGCAGCAACTGGGATGCTG...CTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp ACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATCAGCATCCCAGTTGCTaGAACGAAGTAGAAGGGACT +
Preference number: 4 (lower is better)
Translates to: TINSPSNNIFAPAEASWDQHPSC*NEVEGT
Trigger: AGTCCCTTCTACTTCGTTGCAGCAACTGGGATGCTG...ATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp AAGCTAAAAATCTTGCAGTTCTGGGGCAGGAGGAGTGCAACAAGCAGGCAACAAATCTGCTCATTCCTTTaGTTCGAAATGGGATGTCGA +
Preference number: 4 (lower is better)
Translates to: KLKILQFWGRRSATSRQQICSFL*FEMGCR
Trigger: TCGACATCCCATTTCGAAGCAAAGGAATGAGCAGAT...TTGTTGCCTGCTTGTTGCACTCCTCCTGCCCCAGAACTGCAAGATTTTTAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR GCA 90 bp GGACAGCCCCTGTTAGAGATAAACCGAGGCACTAGACAAGGAAGAAATGCATTACCTCTTCTCCCAATCTaGTCATTCCTTTGCTTCGAA +
Preference number: 4 (lower is better)
Translates to: GQPLLEINRGTRQGRNALPLLPI*SFLCFE
Trigger: TTCGAAGCAAAGGAATGAGCAGATTGGGAGAAGAGG...TAATGCATTTCTTCCTTGTCTAGTGCCTCGGTTTATCTCTAACAGGGGCTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp GGACAGCCCCTGTTAGAGATAAACCGAGGCACTAGACAAGGAAGAAATGCATTACTGCTGAGATTCTGTTaGTTCCCCATTAACCTCTTC +
Preference number: 4 (lower is better)
Translates to: GQPLLEINRGTRQGRNALLLRFC*FPINLF
Trigger: GAAGAGGTTAATGGGGAAGCAACAGAATCTCAGCAG...TAATGCATTTCTTCCTTGTCTAGTGCCTCGGTTTATCTCTAACAGGGGCTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp ACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATTCACCAGCTCACCAATaGCTTTGTCCAGGTACCACT +
Preference number: 4 (lower is better)
Translates to: TINSPSNNIFAPAEASWDSPAHQ*LCPGTT
Trigger: AGTGGTACCTGGACAAAGGCATTGGTGAGCTGGTGA...ATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp GGACAGCCCCTGTTAGAGATAAACCGAGGCACTAGACAAGGAAGAAATGCATTAATAAAACTCTCTGAGTaGTTGCAGCAGCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: GQPLLEINRGTRQGRNALIKLSE*LQQLLL
Trigger: AAGGAGGAGCTGCTGCAAGCACTCAGAGAGTTTTAT...TAATGCATTTCTTCCTTGTCTAGTGCCTCGGTTTATCTCTAACAGGGGCTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp CTTTGGAAGAACTTTTTCTCCCCTCCTAACAGGACCGATATACTGGACAGCCCCAAAAGAGGTCAGTCTTaGAAATTCGATGAAGCACAG +
Preference number: 4 (lower is better)
Translates to: LWKNFFSPPNRTDILDSPKRGQS*KFDEAQ
Trigger: CTGTGCTTCATCGAATTTGCAAGACTGACCTCTTTT...GGGGCTGTCCAGTATATCGGTCCTGTTAGGAGGGGAGAAAAAGTTCTTCCAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR GCA 90 bp ACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATGTCAGAAGAGCAAGATaGAGGATGTGCACGTGGGTT +
Preference number: 4 (lower is better)
Translates to: TINSPSNNIFAPAEASWDVRRAR*RMCTWV
Trigger: AACCCACGTGCACATCCTGCATCTTGCTCTTCTGAC...ATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR GCA 90 bp ATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGACAGAGGGCTGGCTTTaGCTTCCAAATTTACCTGCT +
Preference number: 4 (lower is better)
Translates to: IFPLHRDSRRGRVKIKAKTEGWL*LPNLPA
Trigger: AGCAGGTAAATTTGGAAGGCAAAGCCAGCCCTCTGT...CTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409675.5
CDS-3UTR CCA 90 bp AGAATTCTTCATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATCAGCACTTTCTGCTGTaGCTGTTGGGTCACAGGACT +
Preference number: 4 (lower is better)
Translates to: RILHFSSAQGQQKRESKNQHFLL*LLGHRT
Trigger: AGTCCTGTGACCCAACAGCCACAGCAGAAAGTGCTG...ATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAATGAAGAATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409949.5
CDS-3UTR CCA 90 bp CATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATTAAGGATCTGGGGGCACTaGAGTGCAGCTGATCATCTT +
Preference number: 4 (lower is better)
Translates to: HKLSFKQYLCSSRSILGLRIWGH*SAADHL
Trigger: AAGATGATCAGCTGCACTCCAGTGCCCCCAGATCCT...TAATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409949.5
CDS-3UTR CCA 90 bp AGAATTCTTCATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAGGATCTGGGGGCACTaGAGTGCAGCTGATCATCTT +
Preference number: 4 (lower is better)
Translates to: RILHFSSAQGQQKRESKNRIWGH*SAADHL
Trigger: AAGATGATCAGCTGCACTCCAGTGCCCCCAGATCCT...ATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAATGAAGAATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409949.5
CDS-3UTR CCA 90 bp TCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCCTCCAACTTTCAAAATaGTGCCATCTGCCAAAATAT +
Preference number: 4 (lower is better)
Translates to: SSAQGQQKRESKNKGEGLLQLSK*CHLPKY
Trigger: ATATTTTGGCAGATGGCACCATTTTGAAAGTTGGAG...GAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp CATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATTACCTGCAGAAGCTTGCTaGCATCTTCTGAGCATCCCA +
Preference number: 4 (lower is better)
Translates to: HKLSFKQYLCSSRSILGLPAEAC*HLLSIP
Trigger: TGGGATGCTCAGAAGATGCCAGCAAGCTTCTGCAGG...TAATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp CAAAACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGCCTGCAGAAGCTTGCTaGCATCTTCTGAGCATCCCA +
Preference number: 4 (lower is better)
Translates to: QNHKLSFKQYLCSSRSILPAEAC*HLLSIP
Trigger: TGGGATGCTCAGAAGATGCCAGCAAGCTTCTGCAGG...CAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp GGACAGCCCCTGTTAGAGATAAACCGAGGCACTAGACAAGGAAGAAATGCATTAAAATCTGGGCATCCCTaGCAGCATAAATTACCTGGT +
Preference number: 4 (lower is better)
Translates to: GQPLLEINRGTRQGRNALKSGHP*QHKLPG
Trigger: ACCAGGTAATTTATGCTGCCAGGGATGCCCAGATTT...TAATGCATTTCTTCCTTGTCTAGTGCCTCGGTTTATCTCTAACAGGGGCTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp GGACAGCCCCTGTTAGAGATAAACCGAGGCACTAGACAAGGAAGAAATGCATTACTTCCGGTACTCATGTaGAATCACGTTCTTCCGAAT +
Preference number: 4 (lower is better)
Translates to: GQPLLEINRGTRQGRNALLPVLM*NHVLPN
Trigger: ATTCGGAAGAACGTGATTCCACATGAGTACCGGAAG...TAATGCATTTCTTCCTTGTCTAGTGCCTCGGTTTATCTCTAACAGGGGCTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp CATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATTAGGTCCTTCATCTCGATaGGGAAGTGCTTCCGGTACT +
Preference number: 4 (lower is better)
Translates to: HKLSFKQYLCSSRSILGLGPSSR*GSASGT
Trigger: AGTACCGGAAGCACTTCCCCATCGAGATGAAGGACC...TAATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp AGAATTCTTCATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATACATCGTGGGAGTTGTaGTCCTTCATCTCGATGGGG +
Preference number: 4 (lower is better)
Translates to: RILHFSSAQGQQKRESKNTSWEL*SFISMG
Trigger: CCCCATCGAGATGAAGGACCACAACTCCCACGATGT...ATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAATGAAGAATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp AGAATTCTTCATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAGCAGCAGCACATCGTaGGAGTTGTGGTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: RILHFSSAQGQQKRESKNSSSTS*ELWSFI
Trigger: GATGAAGGACCACAACTCCCACGATGTGCTGCTGCT...ATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAATGAAGAATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp AGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGAGGCATAGTAGTTGGAAATaGCATGGCAGGAGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: RGRVKIKAKASLVHKNERHSSWK*HGRRCR
Trigger: TCTGCACCTCCTGCCATGCCATTTCCAACTACTATG...CCTCTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp ATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGCATAGTAGTTGGAAATaGCATGGCAGGAGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: IFPLHRDSRRGRVKIKAKHSSWK*HGRRCR
Trigger: TCTGCACCTCCTGCCATGCCATTTCCAACTACTATG...CTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp CATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATTATTCTGGTCTCCAGGCTaGCAGCCTCTTGAAGCATCT +
Preference number: 4 (lower is better)
Translates to: HKLSFKQYLCSSRSILGLFWSPG*QPLEAS
Trigger: AGATGCTTCAAGAGGCTGCCAGCCTGGAGACCAGAA...TAATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp AGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGTTTCATTGGAGATTCTaGTCTCCAGGCTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: RRGRVKIKAKASLVHKNEFHWRF*SPGWQP
Trigger: AGGCTGCCAGCCTGGAGACCAGAATCTCCAATGAAA...CTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp AGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGAGCTATCAAGACAGCTaGATGGGAAGATCTTCCCCG +
Preference number: 4 (lower is better)
Translates to: RRGRVKIKAKASLVHKNESYQDS*MGRSSP
Trigger: CGGGGAAGATCTTCCCATCCAGCTGTCTTGATAGCT...CTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp GCTGTTTGGTCCTGGAAGTGTAAAGGAAAGCCTTTTCAAGTACGTGAAGTAGACCCCACTTGTCCTAACTaGGAGGAAAGCAGCTATCAA +
Preference number: 4 (lower is better)
Translates to: AVWSWKCKGKPFQVREVDPTCPN*EESSYQ
Trigger: TTGATAGCTGCTTTCCTCCCAGTTAGGACAAGTGGG...GTCTACTTCACGTACTTGAAAAGGCTTTCCTTTACACTTCCAGGACCAAACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp ATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGACAGGACCGATATACTaGACAGCCCCTGTTAGAGAT +
Preference number: 4 (lower is better)
Translates to: IFPLHRDSRRGRVKIKAKTGPIY*TAPVRD
Trigger: ATCTCTAACAGGGGCTGTCCAGTATATCGGTCCTGT...CTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp AGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGAGGACAGGACCGATATACTaGACAGCCCCTGTTAGAGAT +
Preference number: 4 (lower is better)
Translates to: RGRVKIKAKASLVHKNERTGPIY*TAPVRD
Trigger: ATCTCTAACAGGGGCTGTCCAGTATATCGGTCCTGT...CCTCTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp AATGTATTAAGTAAGCTCAGTGTCCCAGGCTTCAGAGGAGACAGAGAAGTCCTCCAGGAAGTTGCTGTTTaGTCCTGGAAGTGTAAAGGA +
Preference number: 4 (lower is better)
Translates to: NVLSKLSVPGFRGDREVLQEVAV*SWKCKG
Trigger: TCCTTTACACTTCCAGGACCAAACAGCAACTTCCTG...GAGGACTTCTCTGTCTCCTCTGAAGCCTGGGACACTGAGCTTACTTAATACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp TTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCTCCTAACAGGACCGATACAGGAAGTTGCTGTTTaGTCCTGGAAGTGTAAAGGA +
Preference number: 4 (lower is better)
Translates to: FTSPAFGRTFSPLLTGPIQEVAV*SWKCKG
Trigger: TCCTTTACACTTCCAGGACCAAACAGCAACTTCCTG...TATCGGTCCTGTTAGGAGGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp CATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATTACTCCCAGTGATAGGGTaGAAGTGTGTGGCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: HKLSFKQYLCSSRSILGLLPVIG*KCVAGS
Trigger: ACTTCCTGCCACACACTTCCACCCTATCACTGGGAG...TAATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp CAAAACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGCTCCCAGTGATAGGGTaGAAGTGTGTGGCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: QNHKLSFKQYLCSSRSILLPVIG*KCVAGS
Trigger: ACTTCCTGCCACACACTTCCACCCTATCACTGGGAG...CAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp AGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGAGGAAAATCTTGCAGTTCTaGGGCAGGAGGAGTGCAACA +
Preference number: 4 (lower is better)
Translates to: RGRVKIKAKASLVHKNERKILQF*GRRSAT
Trigger: TGTTGCACTCCTCCTGCCCCAGAACTGCAAGATTTT...CCTCTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp GCTGTTTGGTCCTGGAAGTGTAAAGGAAAGCCTTTTCAAGTACGTGAAGTAGACAAAATCTTGCAGTTCTaGGGCAGGAGGAGTGCAACA +
Preference number: 4 (lower is better)
Translates to: AVWSWKCKGKPFQVREVDKILQF*GRRSAT
Trigger: TGTTGCACTCCTCCTGCCCCAGAACTGCAAGATTTT...GTCTACTTCACGTACTTGAAAAGGCTTTCCTTTACACTTCCAGGACCAAACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp AGTCGCGAAGTTTTACATTTACATCCAGTGAGCCTTGTGCTTACAAGTAGTTTTTGCAGGATGTGCACGTaGGTTCATGGGCTGCTACTG +
Preference number: 4 (lower is better)
Translates to: SREVLHLHPVSLVLTSSFCRMCT*VHGLLL
Trigger: CAGTAGCAGCCCATGAACCCACGTGCACATCCTGCA...AAAACTACTTGTAAGCACAAGGCTCACTGGATGTAAATGTAAAACTTCGCGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR CCA 90 bp TCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCATTCCTCAAAGTGGCTaGTACTATTTGTTTTCAAGG +
Preference number: 4 (lower is better)
Translates to: SSAQGQQKRESKNKGEGLIPQSG*YYLFSR
Trigger: CCTTGAAAACAAATAGTACCAGCCACTTTGAGGAAT...GAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR CCA 90 bp GCTGTTTGGTCCTGGAAGTGTAAAGGAAAGCCTTTTCAAGTACGTGAAGTAGACTCACAGAAAGCTCCATaGGAAAACCCTTTCCCTAGC +
Preference number: 4 (lower is better)
Translates to: AVWSWKCKGKPFQVREVDSQKAP*ENPFPS
Trigger: GCTAGGGAAAGGGTTTTCCCATGGAGCTTTCTGTGA...GTCTACTTCACGTACTTGAAAAGGCTTTCCTTTACACTTCCAGGACCAAACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR TCA 90 bp GGACAGCCCCTGTTAGAGATAAACCGAGGCACTAGACAAGGAAGAAATGCATTATTGTCCAGGTACCACTaGGCTTTTCTTCTATCACAA +
Preference number: 4 (lower is better)
Translates to: GQPLLEINRGTRQGRNALLSRYH*AFLLSQ
Trigger: TTGTGATAGAAGAAAAGCTCAGTGGTACCTGGACAA...TAATGCATTTCTTCCTTGTCTAGTGCCTCGGTTTATCTCTAACAGGGGCTGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp ATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGTGTTATAAAACTCTCTaGGTGCTTGCAGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: IFPLHRDSRRGRVKIKAKCYKTL*VLAAAP
Trigger: AGGAGCTGCTGCAAGCACTCAGAGAGTTTTATAACA...CTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp AGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGAGGGAAGCATCTCCTCTGTaGCCACGTCTGTGTTATAAA +
Preference number: 4 (lower is better)
Translates to: RGRVKIKAKASLVHKNEREASPL*PRLCYK
Trigger: TTTATAACACAGACGTGGTCACAGAGGAGATGCTTC...CCTCTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp AGAATTCTTCATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATTGGATCCCAACCACATaGGTTACGGGAGAGCATGAA +
Preference number: 4 (lower is better)
Translates to: RILHFSSAQGQQKRESKNWIPTT*VTGEHE
Trigger: TTCATGCTCTCCCGTAACTCATGTGGTTGGGATCCA...ATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAATGAAGAATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR TCA 90 bp ATAAATTTGACTCCTTGTTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCGTACGTGAAGTAGACTaGAGTGACCCAGATGGGATG +
Preference number: 4 (lower is better)
Translates to: INLTPCSLLQPLEELFLPVREVD*SDPDGM
Trigger: CATCCCATCTGGGTCACTTCAGTCTACTTCACGTAC...GGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAACAAGGAGTCAAATTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR TCA 90 bp GCTGTTTGGTCCTGGAAGTGTAAAGGAAAGCCTTTTCAAGTACGTGAAGTAGACGTCTTGCAAATTCGATaGAGCACAGAATACAGGGGA +
Preference number: 4 (lower is better)
Translates to: AVWSWKCKGKPFQVREVDVLQIR*STEYRG
Trigger: TCCCCTGTATTCTGTGCTTCATCGAATTTGCAAGAC...GTCTACTTCACGTACTTGAAAAGGCTTTCCTTTACACTTCCAGGACCAAACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR TCA 90 bp CATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATTACCTCATATTGCAACCTaGCCAGATGACTCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: HKLSFKQYLCSSRSILGLPHIAT*PDDSGS
Trigger: ACTCCCAGAGTCATCTGGTCAGGTTGCAATATGAGG...TAATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR TCA 90 bp AGTCGCGAAGTTTTACATTTACATCCAGTGAGCCTTGTGCTTACAAGTAGTTTTTTAGCCCCAGCAATGTaGATCCCCCTCTTCACAGTC +
Preference number: 4 (lower is better)
Translates to: SREVLHLHPVSLVLTSSFLAPAM*IPLFTV
Trigger: GACTGTGAAGAGGGGGATTCACATTGCTGGGGCTAA...AAAACTACTTGTAAGCACAAGGCTCACTGGATGTAAATGTAAAACTTCGCGACT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR GCA 90 bp ATTCTGAGTTGTGTCACACAGGCTTTGACAATTAATGATGTACTAAAATGGGAATTCGGCGGCGCTGGATaGCTTTCCAGAGGACAAACC +
Preference number: 4 (lower is better)
Translates to: ILSCVTQALTINDVLKWEFGGAG*LSRGQT
Trigger: GGTTTGTCCTCTGGAAAGGCATCCAGCGCCGCCGAA...TTCCCATTTTAGTACATCATTAATTGTCAAAGCCTGTGTGACACAACTCAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409949.5
CDS-3UTR GCA 90 bp AGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGACAGAGGGCTGGCTTTaGCTTCCAAATTTACCCACT +
Preference number: 4 (lower is better)
Translates to: RRGRVKIKAKASLVHKNETEGWL*LPNLPT
Trigger: AGTGGGTAAATTTGGAAGGCAAAGCCAGCCCTCTGT...CTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409018.7
ENST00000409242.5
ENST00000409949.5
CDS-3UTR GCA 90 bp AGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGAATCCTGCAGAAGCTTaGTGGCATCTTCTGAGCATC +
Preference number: 4 (lower is better)
Translates to: RRGRVKIKAKASLVHKNENPAEA*WHLLSI
Trigger: GATGCTCAGAAGATGCCAGCAAGCTTCTGCAGGATT...CTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp AGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGAGCAAATTGTTTCTCTaGCGCATGGCTAGGTATCGG +
Preference number: 4 (lower is better)
Translates to: RRGRVKIKAKASLVHKNESKLFL*RMARYR
Trigger: CCGATACCTAGCCATGCGGCAGAGAAACAATTTGCT...CTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp ACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATAGCAAATTGTTTCTCTaGCGCATGGCTAGGTATCGG +
Preference number: 4 (lower is better)
Translates to: TINSPSNNIFAPAEASWDSKLFL*RMARYR
Trigger: CCGATACCTAGCCATGCGGCAGAGAAACAATTTGCT...ATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp CAAAACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGCAGCATCCCAGTTGCTaGAACGAAGTAGAAGGGACT +
Preference number: 4 (lower is better)
Translates to: QNHKLSFKQYLCSSRSILQHPSC*NEVEGT
Trigger: AGTCCCTTCTACTTCGTTGCAGCAACTGGGATGCTG...CAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp CATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATTACAGCATCCCAGTTGCTaGAACGAAGTAGAAGGGACT +
Preference number: 4 (lower is better)
Translates to: HKLSFKQYLCSSRSILGLQHPSC*NEVEGT
Trigger: AGTCCCTTCTACTTCGTTGCAGCAACTGGGATGCTG...TAATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp CATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATTATCTCAGCATCCCAGTTaGTGCAACGAAGTAGAAGGG +
Preference number: 4 (lower is better)
Translates to: HKLSFKQYLCSSRSILGLSQHPS*CNEVEG
Trigger: CCCTTCTACTTCGTTGCAGCAACTGGGATGCTGAGA...TAATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp TTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCTCCTAACAGGACCGATAATCTGCTCATTCCTTTaGTTCGAAATGGGATGTCGA +
Preference number: 4 (lower is better)
Translates to: FTSPAFGRTFSPLLTGPIICSFL*FEMGCR
Trigger: TCGACATCCCATTTCGAAGCAAAGGAATGAGCAGAT...TATCGGTCCTGTTAGGAGGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR GCA 90 bp AATGTATTAAGTAAGCTCAGTGTCCCAGGCTTCAGAGGAGACAGAGAAGTCCTCATCTGCTCATTCCTTTaGTTCGAAATGGGATGTCGA +
Preference number: 4 (lower is better)
Translates to: NVLSKLSVPGFRGDREVLICSFL*FEMGCR
Trigger: TCGACATCCCATTTCGAAGCAAAGGAATGAGCAGAT...GAGGACTTCTCTGTCTCCTCTGAAGCCTGGGACACTGAGCTTACTTAATACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR GCA 90 bp ATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGCTGCTGAGATTCTGTTaGTTCCCCATTAACCTCTTC +
Preference number: 4 (lower is better)
Translates to: IFPLHRDSRRGRVKIKAKLLRFC*FPINLF
Trigger: GAAGAGGTTAATGGGGAAGCAACAGAATCTCAGCAG...CTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp ATTCTGAGTTGTGTCACACAGGCTTTGACAATTAATGATGTACTAAAATGGGAACTCTCCCTTGGTGGTTaGCTGGCACCATCCCATCCA +
Preference number: 4 (lower is better)
Translates to: ILSCVTQALTINDVLKWELSLGG*LAPSHP
Trigger: TGGATGGGATGGTGCCAGGCAACCACCAAGGGAGAG...TTCCCATTTTAGTACATCATTAATTGTCAAAGCCTGTGTGACACAACTCAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp ACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATTTCTTCTATCACAAGTaGAGAGGGGCTGTCCATCAG +
Preference number: 4 (lower is better)
Translates to: TINSPSNNIFAPAEASWDFFYHK*RGAVHQ
Trigger: CTGATGGACAGCCCCTCTGCACTTGTGATAGAAGAA...ATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp AGAATTCTTCATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATTCACCAGCTCACCAATaGCTTTGTCCAGGTACCACT +
Preference number: 4 (lower is better)
Translates to: RILHFSSAQGQQKRESKNSPAHQ*LCPGTT
Trigger: AGTGGTACCTGGACAAAGGCATTGGTGAGCTGGTGA...ATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAATGAAGAATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp ACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATTGTAGGAGTCTCTCTTaGCACACACTACACACAGGT +
Preference number: 4 (lower is better)
Translates to: TINSPSNNIFAPAEASWDCRSLS*HTLHTG
Trigger: ACCTGTGTGTAGTGTGTGGCAAGAGAGACTCCTACA...ATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp AGAATTCTTCATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATATCTCGATGGGGAAGTaGTTCCGGTACTCATGTGGA +
Preference number: 4 (lower is better)
Translates to: RILHFSSAQGQQKRESKNISMGK*FRYSCG
Trigger: TCCACATGAGTACCGGAAGCACTTCCCCATCGAGAT...ATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAATGAAGAATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp AGAATTCTTCATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAACTCCTTGGCCAGCTaGTGCTTCAGATGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: RILHFSSAQGQQKRESKNNSLAS*CFRWLS
Trigger: TGACAACCATCTGAAGCAGCAGCTGGCCAAGGAGTT...ATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAATGAAGAATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp AAGATAACATTACTCTCAGAAAGGGGTGAAGCTAAAAATCTTGCAGTTCTGGGGAACTCCTTGGCCAGCTaGTGCTTCAGATGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: KITLLSERGEAKNLAVLGNSLAS*CFRWLS
Trigger: TGACAACCATCTGAAGCAGCAGCTGGCCAAGGAGTT...CCCCAGAACTGCAAGATTTTTAGCTTCACCCCTTTCTGAGAGTAATGTTATCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR GCA 90 bp ACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATGATCCCAGAAATGCCTaGCTGAAGACAAGTGGGAAT +
Preference number: 4 (lower is better)
Translates to: TINSPSNNIFAPAEASWDDPRNA*LKTSGN
Trigger: ATTCCCACTTGTCTTCAGGCAGGCATTTCTGGGATC...ATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR GCA 90 bp AATGTATTAAGTAAGCTCAGTGTCCCAGGCTTCAGAGGAGACAGAGAAGTCCTCTTTCCTCTACTTTGCTaGTGGCTCTATTTTACTGCG +
Preference number: 4 (lower is better)
Translates to: NVLSKLSVPGFRGDREVLFPLLC*WLYFTA
Trigger: CGCAGTAAAATAGAGCCAGCAGCAAAGTAGAGGAAA...GAGGACTTCTCTGTCTCCTCTGAAGCCTGGGACACTGAGCTTACTTAATACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR CCA 90 bp ACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATTTCTGCTGTGGCTGTTaGGTCACAGGACTCGTTTTA +
Preference number: 4 (lower is better)
Translates to: TINSPSNNIFAPAEASWDFCCGC*VTGLVL
Trigger: TAAAACGAGTCCTGTGACCCAACAGCCACAGCAGAA...ATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409949.5
CDS-3UTR CCA 90 bp AATGTATTAAGTAAGCTCAGTGTCCCAGGCTTCAGAGGAGACAGAGAAGTCCTCATGTCGACCACACCCTaGCATTTTTCCAAGACTTTT +
Preference number: 4 (lower is better)
Translates to: NVLSKLSVPGFRGDREVLMSTTP*HFSKTF
Trigger: AAAAGTCTTGGAAAAATGCCAGGGTGTGGTCGACAT...GAGGACTTCTCTGTCTCCTCTGAAGCCTGGGACACTGAGCTTACTTAATACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp ATAAATTTGACTCCTTGTTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCTCCTTTGCTTCGAAATaGGATGTCGACCACACCCTG +
Preference number: 4 (lower is better)
Translates to: INLTPCSLLQPLEELFLPSFASK*DVDHTL
Trigger: CAGGGTGTGGTCGACATCCCATTTCGAAGCAAAGGA...GGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAACAAGGAGTCAAATTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp ACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATAAAGAGGTGATTTTCTaGCAGAATAGCCCACCCCCA +
Preference number: 4 (lower is better)
Translates to: TINSPSNNIFAPAEASWDKEVIF*QNSPPP
Trigger: TGGGGGTGGGCTATTCTGCCAGAAAATCACCTCTTT...ATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp GCTGTTTGGTCCTGGAAGTGTAAAGGAAAGCCTTTTCAAGTACGTGAAGTAGACCTTCCGGTACTCATGTaGAATCACGTTCTTCCGAAT +
Preference number: 4 (lower is better)
Translates to: AVWSWKCKGKPFQVREVDLPVLM*NHVLPN
Trigger: ATTCGGAAGAACGTGATTCCACATGAGTACCGGAAG...GTCTACTTCACGTACTTGAAAAGGCTTTCCTTTACACTTCCAGGACCAAACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp AGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGCATAGTAGTTGGAAATaGCATGGCAGGAGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: RRGRVKIKAKASLVHKNEHSSWK*HGRRCR
Trigger: TCTGCACCTCCTGCCATGCCATTTCCAACTACTATG...CTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp AGAATTCTTCATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATTTTCATTGGAGATTCTaGTCTCCAGGCTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: RILHFSSAQGQQKRESKNFHWRF*SPGWQP
Trigger: AGGCTGCCAGCCTGGAGACCAGAATCTCCAATGAAA...ATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAATGAAGAATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp CAAAACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGAGCTATCAAGACAGCTaGATGGGAAGATCTTCCCCG +
Preference number: 4 (lower is better)
Translates to: QNHKLSFKQYLCSSRSILSYQDS*MGRSSP
Trigger: CGGGGAAGATCTTCCCATCCAGCTGTCTTGATAGCT...CAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp ATAAATTTGACTCCTTGTTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCAGCTATCAAGACAGCTaGATGGGAAGATCTTCCCCG +
Preference number: 4 (lower is better)
Translates to: INLTPCSLLQPLEELFLPSYQDS*MGRSSP
Trigger: CGGGGAAGATCTTCCCATCCAGCTGTCTTGATAGCT...GGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAACAAGGAGTCAAATTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp CATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATTAAGCTATCAAGACAGCTaGATGGGAAGATCTTCCCCG +
Preference number: 4 (lower is better)
Translates to: HKLSFKQYLCSSRSILGLSYQDS*MGRSSP
Trigger: CGGGGAAGATCTTCCCATCCAGCTGTCTTGATAGCT...TAATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp AGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGCCCACTTGTCCTAACTaGGAGGAAAGCAGCTATCAA +
Preference number: 4 (lower is better)
Translates to: RRGRVKIKAKASLVHKNEPTCPN*EESSYQ
Trigger: TTGATAGCTGCTTTCCTCCCAGTTAGGACAAGTGGG...CTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp CCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTAATGATGTACTAAAATaGGAAGAGGTGACTCTTCAA +
Preference number: 4 (lower is better)
Translates to: PLHRDSRRGRVKIKAKASNDVLK*EEVTLQ
Trigger: TTGAAGAGTCACCTCTTCCCATTTTAGTACATCATT...AGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp AGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGACAGGACCGATATACTaGACAGCCCCTGTTAGAGAT +
Preference number: 4 (lower is better)
Translates to: RRGRVKIKAKASLVHKNETGPIY*TAPVRD
Trigger: ATCTCTAACAGGGGCTGTCCAGTATATCGGTCCTGT...CTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp GCTGTTTGGTCCTGGAAGTGTAAAGGAAAGCCTTTTCAAGTACGTGAAGTAGACCACTTCTCCAGCCTTTaGAAGAACTTTTTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: AVWSWKCKGKPFQVREVDHFSSL*KNFFSP
Trigger: AGGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTG...GTCTACTTCACGTACTTGAAAAGGCTTTCCTTTACACTTCCAGGACCAAACAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp ACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATAAAATCTTGCAGTTCTaGGGCAGGAGGAGTGCAACA +
Preference number: 4 (lower is better)
Translates to: TINSPSNNIFAPAEASWDKILQF*GRRSAT
Trigger: TGTTGCACTCCTCCTGCCCCAGAACTGCAAGATTTT...ATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR TCA 90 bp AAGATAACATTACTCTCAGAAAGGGGTGAAGCTAAAAATCTTGCAGTTCTGGGGTTTCTTGGCTTCTGCTaGGATTCTGTTGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: KITLLSERGEAKNLAVLGFLGFC*DSVASP
Trigger: TGGGGAAGCAACAGAATCTCAGCAGAAGCCAAGAAA...CCCCAGAACTGCAAGATTTTTAGCTTCACCCCTTTCTGAGAGTAATGTTATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR TCA 90 bp CATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATTATTTCTTGGCTTCTGCTaGGATTCTGTTGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: HKLSFKQYLCSSRSILGLFLGFC*DSVASP
Trigger: TGGGGAAGCAACAGAATCTCAGCAGAAGCCAAGAAA...TAATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp AGAATTCTTCATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATTTTCTTGGCTTCTGCTaGGATTCTGTTGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: RILHFSSAQGQQKRESKNFLGFC*DSVASP
Trigger: TGGGGAAGCAACAGAATCTCAGCAGAAGCCAAGAAA...ATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAATGAAGAATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp ACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATTGTTATAAAACTCTCTaGGTGCTTGCAGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: TINSPSNNIFAPAEASWDCYKTL*VLAAAP
Trigger: AGGAGCTGCTGCAAGCACTCAGAGAGTTTTATAACA...ATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp AGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGTGTTATAAAACTCTCTaGGTGCTTGCAGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: RRGRVKIKAKASLVHKNECYKTL*VLAAAP
Trigger: AGGAGCTGCTGCAAGCACTCAGAGAGTTTTATAACA...CTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp ACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATGAAGCATCTCCTCTGTaGCCACGTCTGTGTTATAAA +
Preference number: 4 (lower is better)
Translates to: TINSPSNNIFAPAEASWDEASPL*PRLCYK
Trigger: TTTATAACACAGACGTGGTCACAGAGGAGATGCTTC...ATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp ATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGTCTAGGTTAGTATTCTaGGTTGTGTCACACAGGCTT +
Preference number: 4 (lower is better)
Translates to: IFPLHRDSRRGRVKIKAKSRLVF*VVSHRL
Trigger: AAGCCTGTGTGACACAACTCAGAATACTAACCTAGA...CTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp AGTCGCGAAGTTTTACATTTACATCCAGTGAGCCTTGTGCTTACAAGTAGTTTTTGGATCCCAACCACATaGGTTACGGGAGAGCATGAA +
Preference number: 4 (lower is better)
Translates to: SREVLHLHPVSLVLTSSFWIPTT*VTGEHE
Trigger: TTCATGCTCTCCCGTAACTCATGTGGTTGGGATCCA...AAAACTACTTGTAAGCACAAGGCTCACTGGATGTAAATGTAAAACTTCGCGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR TCA 90 bp AATGTATTAAGTAAGCTCAGTGTCCCAGGCTTCAGAGGAGACAGAGAAGTCCTCAATGGCCTAACATTTTaGAAGATGAAACAACGCTCC +
Preference number: 4 (lower is better)
Translates to: NVLSKLSVPGFRGDREVLNGLTF*KMKQRS
Trigger: GGAGCGTTGTTTCATCTTTCAAAATGTTAGGCCATT...GAGGACTTCTCTGTCTCCTCTGAAGCCTGGGACACTGAGCTTACTTAATACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR TCA 90 bp AATGTATTAAGTAAGCTCAGTGTCCCAGGCTTCAGAGGAGACAGAGAAGTCCTCATAAAAACAAATCTATaGGTGCCCTCTTGTGGCAAG +
Preference number: 4 (lower is better)
Translates to: NVLSKLSVPGFRGDREVLIKTNL*VPSCGK
Trigger: CTTGCCACAAGAGGGCACTCATAGATTTGTTTTTAT...GAGGACTTCTCTGTCTCCTCTGAAGCCTGGGACACTGAGCTTACTTAATACATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR GCA 90 bp ATTCTGAGTTGTGTCACACAGGCTTTGACAATTAATGATGTACTAAAATGGGAACTGCCCAGCACTTTCTaGTGTGGCTGTTGGGTCACA +
Preference number: 4 (lower is better)
Translates to: ILSCVTQALTINDVLKWELPSTF*CGCWVT
Trigger: TGTGACCCAACAGCCACAGCAGAAAGTGCTGGGCAG...TTCCCATTTTAGTACATCATTAATTGTCAAAGCCTGTGTGACACAACTCAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409949.5
CDS-3UTR GCA 90 bp CAAAACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGCACCGTCACCACCTTTaGTTTAAGGATCCGTTCCTT +
Preference number: 4 (lower is better)
Translates to: QNHKLSFKQYLCSSRSILHRHHL*FKDPFL
Trigger: AAGGAACGGATCCTTAAAGCAAAGGTGGTGACGGTG...CAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409949.5
CDS-3UTR GCA 90 bp CATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATTAACAGAGGGCTGGCTTTaGCTTCCAAATTTACCCACT +
Preference number: 4 (lower is better)
Translates to: HKLSFKQYLCSSRSILGLTEGWL*LPNLPT
Trigger: AGTGGGTAAATTTGGAAGGCAAAGCCAGCCCTCTGT...TAATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409018.7
ENST00000409242.5
ENST00000409949.5
CDS-3UTR GCA 90 bp CAAAACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGACAGAGGGCTGGCTTTaGCTTCCAAATTTACCCACT +
Preference number: 4 (lower is better)
Translates to: QNHKLSFKQYLCSSRSILTEGWL*LPNLPT
Trigger: AGTGGGTAAATTTGGAAGGCAAAGCCAGCCCTCTGT...CAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409018.7
ENST00000409242.5
ENST00000409949.5
CDS-3UTR GCA 90 bp CATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATTAAATCCTGCAGAAGCTTaGTGGCATCTTCTGAGCATC +
Preference number: 4 (lower is better)
Translates to: HKLSFKQYLCSSRSILGLNPAEA*WHLLSI
Trigger: GATGCTCAGAAGATGCCAGCAAGCTTCTGCAGGATT...TAATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp AGAATTCTTCATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAATCCTGCAGAAGCTTaGTGGCATCTTCTGAGCATC +
Preference number: 4 (lower is better)
Translates to: RILHFSSAQGQQKRESKNNPAEA*WHLLSI
Trigger: GATGCTCAGAAGATGCCAGCAAGCTTCTGCAGGATT...ATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAATGAAGAATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp CATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATTAAGCAAATTGTTTCTCTaGCGCATGGCTAGGTATCGG +
Preference number: 4 (lower is better)
Translates to: HKLSFKQYLCSSRSILGLSKLFL*RMARYR
Trigger: CCGATACCTAGCCATGCGGCAGAGAAACAATTTGCT...TAATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp GCTGTTTGGTCCTGGAAGTGTAAAGGAAAGCCTTTTCAAGTACGTGAAGTAGACATCTGCTCATTCCTTTaGTTCGAAATGGGATGTCGA +
Preference number: 4 (lower is better)
Translates to: AVWSWKCKGKPFQVREVDICSFL*FEMGCR
Trigger: TCGACATCCCATTTCGAAGCAAAGGAATGAGCAGAT...GTCTACTTCACGTACTTGAAAAGGCTTTCCTTTACACTTCCAGGACCAAACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR GCA 90 bp ACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATCTGCTGAGATTCTGTTaGTTCCCCATTAACCTCTTC +
Preference number: 4 (lower is better)
Translates to: TINSPSNNIFAPAEASWDLLRFC*FPINLF
Trigger: GAAGAGGTTAATGGGGAAGCAACAGAATCTCAGCAG...ATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp AGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGCTGCTGAGATTCTGTTaGTTCCCCATTAACCTCTTC +
Preference number: 4 (lower is better)
Translates to: RRGRVKIKAKASLVHKNELLRFC*FPINLF
Trigger: GAAGAGGTTAATGGGGAAGCAACAGAATCTCAGCAG...CTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp ATAAATTTGACTCCTTGTTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCTTCTTCTATCACAAGTaGAGAGGGGCTGTCCATCAG +
Preference number: 4 (lower is better)
Translates to: INLTPCSLLQPLEELFLPFFYHK*RGAVHQ
Trigger: CTGATGGACAGCCCCTCTGCACTTGTGATAGAAGAA...GGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAACAAGGAGTCAAATTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR GCA 90 bp CAAAACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGTTCTTCTATCACAAGTaGAGAGGGGCTGTCCATCAG +
Preference number: 4 (lower is better)
Translates to: QNHKLSFKQYLCSSRSILFFYHK*RGAVHQ
Trigger: CTGATGGACAGCCCCTCTGCACTTGTGATAGAAGAA...CAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp AGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGATAAAACTCTCTGAGTaGTTGCAGCAGCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: RRGRVKIKAKASLVHKNEIKLSE*LQQLLL
Trigger: AAGGAGGAGCTGCTGCAAGCACTCAGAGAGTTTTAT...CTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp GGACAGCCCCTGTTAGAGATAAACCGAGGCACTAGACAAGGAAGAAATGCATTATTCAAACAATATCTTTaGTCCAGCAGAAGCATCCTG +
Preference number: 4 (lower is better)
Translates to: GQPLLEINRGTRQGRNALFKQYL*SSRSIL
Trigger: CAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAA...TAATGCATTTCTTCCTTGTCTAGTGCCTCGGTTTATCTCTAACAGGGGCTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp AGAATTCTTCATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATTTCTGCTGTGGCTGTTaGGTCACAGGACTCGTTTTA +
Preference number: 4 (lower is better)
Translates to: RILHFSSAQGQQKRESKNFCCGC*VTGLVL
Trigger: TAAAACGAGTCCTGTGACCCAACAGCCACAGCAGAA...ATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAATGAAGAATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409949.5
CDS-3UTR CCA 90 bp AGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGAAATCTGGGCATCCCTaGCAGCATAAATTACCTGGT +
Preference number: 4 (lower is better)
Translates to: RRGRVKIKAKASLVHKNEKSGHP*QHKLPG
Trigger: ACCAGGTAATTTATGCTGCCAGGGATGCCCAGATTT...CTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp GCTGTTTGGTCCTGGAAGTGTAAAGGAAAGCCTTTTCAAGTACGTGAAGTAGACTTCTTTTATGTTTTCTaGGGTCTCTCCCTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: AVWSWKCKGKPFQVREVDFFYVF*GLSLGG
Trigger: ACCACCAAGGGAGAGACCCCAGAAAACATAAAAGAA...GTCTACTTCACGTACTTGAAAAGGCTTTCCTTTACACTTCCAGGACCAAACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp AAGATAACATTACTCTCAGAAAGGGGTGAAGCTAAAAATCTTGCAGTTCTGGGGAAAGAGGTGATTTTCTaGCAGAATAGCCCACCCCCA +
Preference number: 4 (lower is better)
Translates to: KITLLSERGEAKNLAVLGKEVIF*QNSPPP
Trigger: TGGGGGTGGGCTATTCTGCCAGAAAATCACCTCTTT...CCCCAGAACTGCAAGATTTTTAGCTTCACCCCTTTCTGAGAGTAATGTTATCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp ACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATCTTCCGGTACTCATGTaGAATCACGTTCTTCCGAAT +
Preference number: 4 (lower is better)
Translates to: TINSPSNNIFAPAEASWDLPVLM*NHVLPN
Trigger: ATTCGGAAGAACGTGATTCCACATGAGTACCGGAAG...ATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp AGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGCTTCCGGTACTCATGTaGAATCACGTTCTTCCGAAT +
Preference number: 4 (lower is better)
Translates to: RRGRVKIKAKASLVHKNELPVLM*NHVLPN
Trigger: ATTCGGAAGAACGTGATTCCACATGAGTACCGGAAG...CTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp CAAAACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGCATAGTAGTTGGAAATaGCATGGCAGGAGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: QNHKLSFKQYLCSSRSILHSSWK*HGRRCR
Trigger: TCTGCACCTCCTGCCATGCCATTTCCAACTACTATG...CAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp GCTGTTTGGTCCTGGAAGTGTAAAGGAAAGCCTTTTCAAGTACGTGAAGTAGACGAACATAGTTTTCATTaGAGATTCTGGTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: AVWSWKCKGKPFQVREVDEHSFH*RFWSPG
Trigger: GCCTGGAGACCAGAATCTCCAATGAAAACTATGTTC...GTCTACTTCACGTACTTGAAAAGGCTTTCCTTTACACTTCCAGGACCAAACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp AGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGAGGGAACATAGTTTTCATTaGAGATTCTGGTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: RGRVKIKAKASLVHKNEREHSFH*RFWSPG
Trigger: GCCTGGAGACCAGAATCTCCAATGAAAACTATGTTC...CCTCTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp ACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATATCAAGACAGCTGGATaGGAAGATCTTCCCCGAATT +
Preference number: 4 (lower is better)
Translates to: TINSPSNNIFAPAEASWDIKTAG*EDLPRI
Trigger: AATTCGGGGAAGATCTTCCCATCCAGCTGTCTTGAT...ATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp AGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGATCAAGACAGCTGGATaGGAAGATCTTCCCCGAATT +
Preference number: 4 (lower is better)
Translates to: RRGRVKIKAKASLVHKNEIKTAG*EDLPRI
Trigger: AATTCGGGGAAGATCTTCCCATCCAGCTGTCTTGAT...CTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp ATAAATTTGACTCCTTGTTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCCCCACTTGTCCTAACTaGGAGGAAAGCAGCTATCAA +
Preference number: 4 (lower is better)
Translates to: INLTPCSLLQPLEELFLPPTCPN*EESSYQ
Trigger: TTGATAGCTGCTTTCCTCCCAGTTAGGACAAGTGGG...GGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAACAAGGAGTCAAATTTAT
43% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp AGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGCACTTCTCCAGCCTTTaGAAGAACTTTTTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: RRGRVKIKAKASLVHKNEHFSSL*KNFFSP
Trigger: AGGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTG...CTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp ACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATGTTGCTGTTTGGTCCTaGAAGTGTAAAGGAAAGCCT +
Preference number: 4 (lower is better)
Translates to: TINSPSNNIFAPAEASWDVAVWS*KCKGKP
Trigger: AGGCTTTCCTTTACACTTCCAGGACCAAACAGCAAC...ATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp GGACAGCCCCTGTTAGAGATAAACCGAGGCACTAGACAAGGAAGAAATGCATTAAGTTCTATTGGGAGATaGAGTTTGTGGTTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: GQPLLEINRGTRQGRNALSSIGR*SLWFFL
Trigger: CAGAAAGAACCACAAACTCCATCTCCCAATAGAACT...TAATGCATTTCTTCCTTGTCTAGTGCCTCGGTTTATCTCTAACAGGGGCTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp CATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATTAAAAATCTTGCAGTTCTaGGGCAGGAGGAGTGCAACA +
Preference number: 4 (lower is better)
Translates to: HKLSFKQYLCSSRSILGLKILQF*GRRSAT
Trigger: TGTTGCACTCCTCCTGCCCCAGAACTGCAAGATTTT...TAATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp CATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATTACCTCTACTTTGCTGCTaGCTCTATTTTACTGCGCCT +
Preference number: 4 (lower is better)
Translates to: HKLSFKQYLCSSRSILGLPLLCC*LYFTAP
Trigger: AGGCGCAGTAAAATAGAGCCAGCAGCAAAGTAGAGG...TAATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR CCA 90 bp ACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATTTGTGTGACGCAGTCTaGCTTTTTCCTCTACTTTGC +
Preference number: 4 (lower is better)
Translates to: TINSPSNNIFAPAEASWDLCDAV*LFPLLC
Trigger: GCAAAGTAGAGGAAAAAGCCAGACTGCGTCACACAA...ATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR TCA 90 bp CCCCAGCAATGTGAATCCCCCTCTTCACAGTCCAATTCTAAGATTCCATTCTTAGTTATCATAAAGAGGTaGTTTTCTGGCAGAATAGCC +
Preference number: 4 (lower is better)
Translates to: PQQCESPSSQSNSKIPFLVIIKR*FSGRIA
Trigger: GGCTATTCTGCCAGAAAATCACCTCTTTATGATAAC...TAAGAATGGAATCTTAGAATTGGACTGTGAAGAGGGGGATTCACATTGCTGGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR TCA 90 bp CATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATTATGTTATAAAACTCTCTaGGTGCTTGCAGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: HKLSFKQYLCSSRSILGLCYKTL*VLAAAP
Trigger: AGGAGCTGCTGCAAGCACTCAGAGAGTTTTATAACA...TAATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp ACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATTCTAGGTTAGTATTCTaGGTTGTGTCACACAGGCTT +
Preference number: 4 (lower is better)
Translates to: TINSPSNNIFAPAEASWDSRLVF*VVSHRL
Trigger: AAGCCTGTGTGACACAACTCAGAATACTAACCTAGA...ATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp ATAAATTTGACTCCTTGTTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCGTCTTGCAAATTCGATaGAGCACAGAATACAGGGGA +
Preference number: 4 (lower is better)
Translates to: INLTPCSLLQPLEELFLPVLQIR*STEYRG
Trigger: TCCCCTGTATTCTGTGCTTCATCGAATTTGCAAGAC...GGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAACAAGGAGTCAAATTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR TCA 90 bp AGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGAGGAATGGCCTAACATTTTaGAAGATGAAACAACGCTCC +
Preference number: 4 (lower is better)
Translates to: RGRVKIKAKASLVHKNERNGLTF*KMKQRS
Trigger: GGAGCGTTGTTTCATCTTTCAAAATGTTAGGCCATT...CCTCTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR TCA 90 bp ATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGTTCAAATCTACACAGTaGCTCTCTCCTGAAAAGGAT +
Preference number: 4 (lower is better)
Translates to: IFPLHRDSRRGRVKIKAKFKSTQ*LSPEKD
Trigger: ATCCTTTTCAGGAGAGAGTCACTGTGTAGATTTGAA...CTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR TCA 90 bp GCTGTTTGGTCCTGGAAGTGTAAAGGAAAGCCTTTTCAAGTACGTGAAGTAGACCTCAAGAAGAAATGCTaGACCTGCAAACACAATGAT +
Preference number: 4 (lower is better)
Translates to: AVWSWKCKGKPFQVREVDLKKKC*TCKHND
Trigger: ATCATTGTGTTTGCAGGTTCAGCATTTCTTCTTGAG...GTCTACTTCACGTACTTGAAAAGGCTTTCCTTTACACTTCCAGGACCAAACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR TCA 90 bp CAAAACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGACTACAAGGGGGAAATaGGGCAATAAGGTTGGAAGA +
Preference number: 4 (lower is better)
Translates to: QNHKLSFKQYLCSSRSILTTRGK*GNKVGR
Trigger: TCTTCCAACCTTATTGCCTCATTTCCCCCTTGTAGT...CAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR GCA 90 bp ATTCTGAGTTGTGTCACACAGGCTTTGACAATTAATGATGTACTAAAATGGGAAGATTTGATCCCACTCTaGCTCCTGAGACACCGTCAC +
Preference number: 4 (lower is better)
Translates to: ILSCVTQALTINDVLKWEDLIPL*LLRHRH
Trigger: GTGACGGTGTCTCAGGAGGCAGAGTGGGATCAAATC...TTCCCATTTTAGTACATCATTAATTGTCAAAGCCTGTGTGACACAACTCAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409949.5
CDS-3UTR GCA 90 bp CAAAACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGCTGCTGAGATTCTGTTaGTTCCCCATTAACCTCTTC +
Preference number: 4 (lower is better)
Translates to: QNHKLSFKQYLCSSRSILLLRFC*FPINLF
Trigger: GAAGAGGTTAATGGGGAAGCAACAGAATCTCAGCAG...CAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp AGAATTCTTCATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATATAAAACTCTCTGAGTaGTTGCAGCAGCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: RILHFSSAQGQQKRESKNIKLSE*LQQLLL
Trigger: AAGGAGGAGCTGCTGCAAGCACTCAGAGAGTTTTAT...ATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAATGAAGAATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp ATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGTTCAAACAATATCTTTaGTCCAGCAGAAGCATCCTG +
Preference number: 4 (lower is better)
Translates to: IFPLHRDSRRGRVKIKAKFKQYL*SSRSIL
Trigger: CAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAA...CTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp GCTGTTTGGTCCTGGAAGTGTAAAGGAAAGCCTTTTCAAGTACGTGAAGTAGACAAAAGAGGTCAGTCTTaGAAATTCGATGAAGCACAG +
Preference number: 4 (lower is better)
Translates to: AVWSWKCKGKPFQVREVDKRGQS*KFDEAQ
Trigger: CTGTGCTTCATCGAATTTGCAAGACTGACCTCTTTT...GTCTACTTCACGTACTTGAAAAGGCTTTCCTTTACACTTCCAGGACCAAACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR GCA 90 bp ATAAATTTGACTCCTTGTTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCTTTAGATCCCAGAAATaGCTGCCTGAAGACAAGTGG +
Preference number: 4 (lower is better)
Translates to: INLTPCSLLQPLEELFLPFRSQK*LPEDKW
Trigger: CCACTTGTCTTCAGGCAGGCATTTCTGGGATCTAAA...GGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAACAAGGAGTCAAATTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR CCA 90 bp ATTCTGAGTTGTGTCACACAGGCTTTGACAATTAATGATGTACTAAAATGGGAAAGGATCTGGGGGCACTaGAGTGCAGCTGATCATCTT +
Preference number: 4 (lower is better)
Translates to: ILSCVTQALTINDVLKWERIWGH*SAADHL
Trigger: AAGATGATCAGCTGCACTCCAGTGCCCCCAGATCCT...TTCCCATTTTAGTACATCATTAATTGTCAAAGCCTGTGTGACACAACTCAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409949.5
CDS-3UTR CCA 90 bp TTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCTCCTAACAGGACCGATACTCCAACTTTCAAAATaGTGCCATCTGCCAAAATAT +
Preference number: 4 (lower is better)
Translates to: FTSPAFGRTFSPLLTGPILQLSK*CHLPKY
Trigger: ATATTTTGGCAGATGGCACCATTTTGAAAGTTGGAG...TATCGGTCCTGTTAGGAGGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp ATTCTGAGTTGTGTCACACAGGCTTTGACAATTAATGATGTACTAAAATGGGAATGTTTCTCTGCCGCATaGCTAGGTATCGGAGGTCCA +
Preference number: 4 (lower is better)
Translates to: ILSCVTQALTINDVLKWECFSAA*LGIGGP
Trigger: TGGACCTCCGATACCTAGCCATGCGGCAGAGAAACA...TTCCCATTTTAGTACATCATTAATTGTCAAAGCCTGTGTGACACAACTCAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp ATAAATTTGACTCCTTGTTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCAAATCTGGGCATCCCTaGCAGCATAAATTACCTGGT +
Preference number: 4 (lower is better)
Translates to: INLTPCSLLQPLEELFLPKSGHP*QHKLPG
Trigger: ACCAGGTAATTTATGCTGCCAGGGATGCCCAGATTT...GGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAACAAGGAGTCAAATTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp ACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATATGTCGACCACACCCTaGCATTTTTCCAAGACTTTT +
Preference number: 4 (lower is better)
Translates to: TINSPSNNIFAPAEASWDMSTTP*HFSKTF
Trigger: AAAAGTCTTGGAAAAATGCCAGGGTGTGGTCGACAT...ATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp AGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGGAACATAGTTTTCATTaGAGATTCTGGTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: RRGRVKIKAKASLVHKNEEHSFH*RFWSPG
Trigger: GCCTGGAGACCAGAATCTCCAATGAAAACTATGTTC...CTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp AAGATAACATTACTCTCAGAAAGGGGTGAAGCTAAAAATCTTGCAGTTCTGGGGATCAAGACAGCTGGATaGGAAGATCTTCCCCGAATT +
Preference number: 4 (lower is better)
Translates to: KITLLSERGEAKNLAVLGIKTAG*EDLPRI
Trigger: AATTCGGGGAAGATCTTCCCATCCAGCTGTCTTGAT...CCCCAGAACTGCAAGATTTTTAGCTTCACCCCTTTCTGAGAGTAATGTTATCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp AGAATTCTTCATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATATCAAGACAGCTGGATaGGAAGATCTTCCCCGAATT +
Preference number: 4 (lower is better)
Translates to: RILHFSSAQGQQKRESKNIKTAG*EDLPRI
Trigger: AATTCGGGGAAGATCTTCCCATCCAGCTGTCTTGAT...ATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAATGAAGAATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp CATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATTAATCAAGACAGCTGGATaGGAAGATCTTCCCCGAATT +
Preference number: 4 (lower is better)
Translates to: HKLSFKQYLCSSRSILGLIKTAG*EDLPRI
Trigger: AATTCGGGGAAGATCTTCCCATCCAGCTGTCTTGAT...TAATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp ATAAATTTGACTCCTTGTTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCGTTGCTGTTTGGTCCTaGAAGTGTAAAGGAAAGCCT +
Preference number: 4 (lower is better)
Translates to: INLTPCSLLQPLEELFLPVAVWS*KCKGKP
Trigger: AGGCTTTCCTTTACACTTCCAGGACCAAACAGCAAC...GGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAACAAGGAGTCAAATTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp AGAATTCTTCATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATGTTGCTGTTTGGTCCTaGAAGTGTAAAGGAAAGCCT +
Preference number: 4 (lower is better)
Translates to: RILHFSSAQGQQKRESKNVAVWS*KCKGKP
Trigger: AGGCTTTCCTTTACACTTCCAGGACCAAACAGCAAC...ATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAATGAAGAATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp AAGATAACATTACTCTCAGAAAGGGGTGAAGCTAAAAATCTTGCAGTTCTGGGGCAGGAAGTTGCTGTTTaGTCCTGGAAGTGTAAAGGA +
Preference number: 4 (lower is better)
Translates to: KITLLSERGEAKNLAVLGQEVAV*SWKCKG
Trigger: TCCTTTACACTTCCAGGACCAAACAGCAACTTCCTG...CCCCAGAACTGCAAGATTTTTAGCTTCACCCCTTTCTGAGAGTAATGTTATCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp ATTCTGAGTTGTGTCACACAGGCTTTGACAATTAATGATGTACTAAAATGGGAAGGGAGATGGAGTTTGTaGTTCTTTCTGCCCCACCCA +
Preference number: 4 (lower is better)
Translates to: ILSCVTQALTINDVLKWEGRWSL*FFLPHP
Trigger: TGGGTGGGGCAGAAAGAACCACAAACTCCATCTCCC...TTCCCATTTTAGTACATCATTAATTGTCAAAGCCTGTGTGACACAACTCAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp AGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGAGGAGTTCTATTGGGAGATaGAGTTTGTGGTTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: RGRVKIKAKASLVHKNERSSIGR*SLWFFL
Trigger: CAGAAAGAACCACAAACTCCATCTCCCAATAGAACT...CCTCTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR TCA 90 bp ACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATGTTATCATAAAGAGGTaGTTTTCTGGCAGAATAGCC +
Preference number: 4 (lower is better)
Translates to: TINSPSNNIFAPAEASWDVIIKR*FSGRIA
Trigger: GGCTATTCTGCCAGAAAATCACCTCTTTATGATAAC...ATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp AGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGGTTATCATAAAGAGGTaGTTTTCTGGCAGAATAGCC +
Preference number: 4 (lower is better)
Translates to: RRGRVKIKAKASLVHKNEVIIKR*FSGRIA
Trigger: GGCTATTCTGCCAGAAAATCACCTCTTTATGATAAC...CTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp CATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATTATTGTCCAGGTACCACTaGGCTTTTCTTCTATCACAA +
Preference number: 4 (lower is better)
Translates to: HKLSFKQYLCSSRSILGLLSRYH*AFLLSQ
Trigger: TTGTGATAGAAGAAAAGCTCAGTGGTACCTGGACAA...TAATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp ATTCTGAGTTGTGTCACACAGGCTTTGACAATTAATGATGTACTAAAATGGGAAGTACGTGAAGTAGACTaGAGTGACCCAGATGGGATG +
Preference number: 4 (lower is better)
Translates to: ILSCVTQALTINDVLKWEVREVD*SDPDGM
Trigger: CATCCCATCTGGGTCACTTCAGTCTACTTCACGTAC...TTCCCATTTTAGTACATCATTAATTGTCAAAGCCTGTGTGACACAACTCAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR TCA 90 bp ATTCTGAGTTGTGTCACACAGGCTTTGACAATTAATGATGTACTAAAATGGGAACCTCATATTGCAACCTaGCCAGATGACTCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: ILSCVTQALTINDVLKWEPHIAT*PDDSGS
Trigger: ACTCCCAGAGTCATCTGGTCAGGTTGCAATATGAGG...TTCCCATTTTAGTACATCATTAATTGTCAAAGCCTGTGTGACACAACTCAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR TCA 90 bp AGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGAATAACCCACTACAGTaGATGCACATTCCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: RRGRVKIKAKASLVHKNENNPLQ*MHIPQS
Trigger: ACTTTGAGGAATGTGCATTCACTGTAGTGGGTTATT...CTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR GCA 90 bp CAAAACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGATCTGCTCATTCCTTTaGTTCGAAATGGGATGTCGA +
Preference number: 4 (lower is better)
Translates to: QNHKLSFKQYLCSSRSILICSFL*FEMGCR
Trigger: TCGACATCCCATTTCGAAGCAAAGGAATGAGCAGAT...CAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp AGTCGCGAAGTTTTACATTTACATCCAGTGAGCCTTGTGCTTACAAGTAGTTTTCTGCTGAGATTCTGTTaGTTCCCCATTAACCTCTTC +
Preference number: 4 (lower is better)
Translates to: SREVLHLHPVSLVLTSSFLLRFC*FPINLF
Trigger: GAAGAGGTTAATGGGGAAGCAACAGAATCTCAGCAG...AAAACTACTTGTAAGCACAAGGCTCACTGGATGTAAATGTAAAACTTCGCGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR GCA 90 bp ATTCTGAGTTGTGTCACACAGGCTTTGACAATTAATGATGTACTAAAATGGGAATCACCAGCTCACCAATaGCTTTGTCCAGGTACCACT +
Preference number: 4 (lower is better)
Translates to: ILSCVTQALTINDVLKWESPAHQ*LCPGTT
Trigger: AGTGGTACCTGGACAAAGGCATTGGTGAGCTGGTGA...TTCCCATTTTAGTACATCATTAATTGTCAAAGCCTGTGTGACACAACTCAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp ATTCTGAGTTGTGTCACACAGGCTTTGACAATTAATGATGTACTAAAATGGGAAATCTCGATGGGGAAGTaGTTCCGGTACTCATGTGGA +
Preference number: 4 (lower is better)
Translates to: ILSCVTQALTINDVLKWEISMGK*FRYSCG
Trigger: TCCACATGAGTACCGGAAGCACTTCCCCATCGAGAT...TTCCCATTTTAGTACATCATTAATTGTCAAAGCCTGTGTGACACAACTCAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp CCCCAGCAATGTGAATCCCCCTCTTCACAGTCCAATTCTAAGATTCCATTCTTACTCCAACTTTCAAAATaGTGCCATCTGCCAAAATAT +
Preference number: 4 (lower is better)
Translates to: PQQCESPSSQSNSKIPFLLQLSK*CHLPKY
Trigger: ATATTTTGGCAGATGGCACCATTTTGAAAGTTGGAG...TAAGAATGGAATCTTAGAATTGGACTGTGAAGAGGGGGATTCACATTGCTGGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR CCA 90 bp AGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGAGGCTCCAACTTTCAAAATaGTGCCATCTGCCAAAATAT +
Preference number: 4 (lower is better)
Translates to: RGRVKIKAKASLVHKNERLQLSK*CHLPKY
Trigger: ATATTTTGGCAGATGGCACCATTTTGAAAGTTGGAG...CCTCTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp AGAATTCTTCATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATATGTCGACCACACCCTaGCATTTTTCCAAGACTTTT +
Preference number: 4 (lower is better)
Translates to: RILHFSSAQGQQKRESKNMSTTP*HFSKTF
Trigger: AAAAGTCTTGGAAAAATGCCAGGGTGTGGTCGACAT...ATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAATGAAGAATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp ATAAATTTGACTCCTTGTTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCATGTCGACCACACCCTaGCATTTTTCCAAGACTTTT +
Preference number: 4 (lower is better)
Translates to: INLTPCSLLQPLEELFLPMSTTP*HFSKTF
Trigger: AAAAGTCTTGGAAAAATGCCAGGGTGTGGTCGACAT...GGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAACAAGGAGTCAAATTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp ATTCTGAGTTGTGTCACACAGGCTTTGACAATTAATGATGTACTAAAATGGGAATCCTTTGCTTCGAAATaGGATGTCGACCACACCCTG +
Preference number: 4 (lower is better)
Translates to: ILSCVTQALTINDVLKWESFASK*DVDHTL
Trigger: CAGGGTGTGGTCGACATCCCATTTCGAAGCAAAGGA...TTCCCATTTTAGTACATCATTAATTGTCAAAGCCTGTGTGACACAACTCAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp ATAAATTTGACTCCTTGTTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCTTCTTTTATGTTTTCTaGGGTCTCTCCCTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: INLTPCSLLQPLEELFLPFFYVF*GLSLGG
Trigger: ACCACCAAGGGAGAGACCCCAGAAAACATAAAAGAA...GGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAACAAGGAGTCAAATTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp AGAATTCTTCATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATTTCTTTTATGTTTTCTaGGGTCTCTCCCTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: RILHFSSAQGQQKRESKNFFYVF*GLSLGG
Trigger: ACCACCAAGGGAGAGACCCCAGAAAACATAAAAGAA...ATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAATGAAGAATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp CATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATTATTCTTTTATGTTTTCTaGGGTCTCTCCCTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: HKLSFKQYLCSSRSILGLFFYVF*GLSLGG
Trigger: ACCACCAAGGGAGAGACCCCAGAAAACATAAAAGAA...TAATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp CATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATTAGAACATAGTTTTCATTaGAGATTCTGGTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: HKLSFKQYLCSSRSILGLEHSFH*RFWSPG
Trigger: GCCTGGAGACCAGAATCTCCAATGAAAACTATGTTC...TAATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp AATGTATTAAGTAAGCTCAGTGTCCCAGGCTTCAGAGGAGACAGAGAAGTCCTCAATGATGTACTAAAATaGGAAGAGGTGACTCTTCAA +
Preference number: 4 (lower is better)
Translates to: NVLSKLSVPGFRGDREVLNDVLK*EEVTLQ
Trigger: TTGAAGAGTCACCTCTTCCCATTTTAGTACATCATT...GAGGACTTCTCTGTCTCCTCTGAAGCCTGGGACACTGAGCTTACTTAATACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp AATGTATTAAGTAAGCTCAGTGTCCCAGGCTTCAGAGGAGACAGAGAAGTCCTCTTGACAAGTCACTTCTaGGAGAATTCTTCATTTTTC +
Preference number: 4 (lower is better)
Translates to: NVLSKLSVPGFRGDREVLLTSHF*ENSSFF
Trigger: GAAAAATGAAGAATTCTCCCAGAAGTGACTTGTCAA...GAGGACTTCTCTGTCTCCTCTGAAGCCTGGGACACTGAGCTTACTTAATACATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp ACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATAGTTCTATTGGGAGATaGAGTTTGTGGTTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: TINSPSNNIFAPAEASWDSSIGR*SLWFFL
Trigger: CAGAAAGAACCACAAACTCCATCTCCCAATAGAACT...ATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR TCA 90 bp ATTCTGAGTTGTGTCACACAGGCTTTGACAATTAATGATGTACTAAAATGGGAATTTCTTGGCTTCTGCTaGGATTCTGTTGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: ILSCVTQALTINDVLKWEFLGFC*DSVASP
Trigger: TGGGGAAGCAACAGAATCTCAGCAGAAGCCAAGAAA...TTCCCATTTTAGTACATCATTAATTGTCAAAGCCTGTGTGACACAACTCAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp AAGATAACATTACTCTCAGAAAGGGGTGAAGCTAAAAATCTTGCAGTTCTGGGGGTTATCATAAAGAGGTaGTTTTCTGGCAGAATAGCC +
Preference number: 4 (lower is better)
Translates to: KITLLSERGEAKNLAVLGVIIKR*FSGRIA
Trigger: GGCTATTCTGCCAGAAAATCACCTCTTTATGATAAC...CCCCAGAACTGCAAGATTTTTAGCTTCACCCCTTTCTGAGAGTAATGTTATCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR TCA 90 bp CAAAACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGTTATCATAAAGAGGTaGTTTTCTGGCAGAATAGCC +
Preference number: 4 (lower is better)
Translates to: QNHKLSFKQYLCSSRSILVIIKR*FSGRIA
Trigger: GGCTATTCTGCCAGAAAATCACCTCTTTATGATAAC...CAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp ATAAATTTGACTCCTTGTTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCGTTATCATAAAGAGGTaGTTTTCTGGCAGAATAGCC +
Preference number: 4 (lower is better)
Translates to: INLTPCSLLQPLEELFLPVIIKR*FSGRIA
Trigger: GGCTATTCTGCCAGAAAATCACCTCTTTATGATAAC...GGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAACAAGGAGTCAAATTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR TCA 90 bp ATAAATTTGACTCCTTGTTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCAATGGCCTAACATTTTaGAAGATGAAACAACGCTCC +
Preference number: 4 (lower is better)
Translates to: INLTPCSLLQPLEELFLPNGLTF*KMKQRS
Trigger: GGAGCGTTGTTTCATCTTTCAAAATGTTAGGCCATT...GGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAACAAGGAGTCAAATTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR GCA 90 bp ATTCTGAGTTGTGTCACACAGGCTTTGACAATTAATGATGTACTAAAATGGGAATGTAGGAGTCTCTCTTaGCACACACTACACACAGGT +
Preference number: 4 (lower is better)
Translates to: ILSCVTQALTINDVLKWECRSLS*HTLHTG
Trigger: ACCTGTGTGTAGTGTGTGGCAAGAGAGACTCCTACA...TTCCCATTTTAGTACATCATTAATTGTCAAAGCCTGTGTGACACAACTCAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp AGAATTCTTCATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATTTCAAACAATATCTTTaGTCCAGCAGAAGCATCCTG +
Preference number: 4 (lower is better)
Translates to: RILHFSSAQGQQKRESKNFKQYL*SSRSIL
Trigger: CAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAA...ATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAATGAAGAATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp AGAATTCTTCATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAAGAGGTCAGTCTTaGAAATTCGATGAAGCACAG +
Preference number: 4 (lower is better)
Translates to: RILHFSSAQGQQKRESKNKRGQS*KFDEAQ
Trigger: CTGTGCTTCATCGAATTTGCAAGACTGACCTCTTTT...ATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAATGAAGAATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR GCA 90 bp AAGATAACATTACTCTCAGAAAGGGGTGAAGCTAAAAATCTTGCAGTTCTGGGGAAAAGAGGTCAGTCTTaGAAATTCGATGAAGCACAG +
Preference number: 4 (lower is better)
Translates to: KITLLSERGEAKNLAVLGKRGQS*KFDEAQ
Trigger: CTGTGCTTCATCGAATTTGCAAGACTGACCTCTTTT...CCCCAGAACTGCAAGATTTTTAGCTTCACCCCTTTCTGAGAGTAATGTTATCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp ATTCTGAGTTGTGTCACACAGGCTTTGACAATTAATGATGTACTAAAATGGGAATTCTGCTGTGGCTGTTaGGTCACAGGACTCGTTTTA +
Preference number: 4 (lower is better)
Translates to: ILSCVTQALTINDVLKWEFCCGC*VTGLVL
Trigger: TAAAACGAGTCCTGTGACCCAACAGCCACAGCAGAA...TTCCCATTTTAGTACATCATTAATTGTCAAAGCCTGTGTGACACAACTCAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409949.5
CDS-3UTR CCA 90 bp ACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATCTCCAACTTTCAAAATaGTGCCATCTGCCAAAATAT +
Preference number: 4 (lower is better)
Translates to: TINSPSNNIFAPAEASWDLQLSK*CHLPKY
Trigger: ATATTTTGGCAGATGGCACCATTTTGAAAGTTGGAG...ATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp ATTCTGAGTTGTGTCACACAGGCTTTGACAATTAATGATGTACTAAAATGGGAAAAAGAGGTGATTTTCTaGCAGAATAGCCCACCCCCA +
Preference number: 4 (lower is better)
Translates to: ILSCVTQALTINDVLKWEKEVIF*QNSPPP
Trigger: TGGGGGTGGGCTATTCTGCCAGAAAATCACCTCTTT...TTCCCATTTTAGTACATCATTAATTGTCAAAGCCTGTGTGACACAACTCAGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp ATTCTGAGTTGTGTCACACAGGCTTTGACAATTAATGATGTACTAAAATGGGAACCCACTTGTCCTAACTaGGAGGAAAGCAGCTATCAA +
Preference number: 4 (lower is better)
Translates to: ILSCVTQALTINDVLKWEPTCPN*EESSYQ
Trigger: TTGATAGCTGCTTTCCTCCCAGTTAGGACAAGTGGG...TTCCCATTTTAGTACATCATTAATTGTCAAAGCCTGTGTGACACAACTCAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp GCTGTTTGGTCCTGGAAGTGTAAAGGAAAGCCTTTTCAAGTACGTGAAGTAGACAATGATGTACTAAAATaGGAAGAGGTGACTCTTCAA +
Preference number: 4 (lower is better)
Translates to: AVWSWKCKGKPFQVREVDNDVLK*EEVTLQ
Trigger: TTGAAGAGTCACCTCTTCCCATTTTAGTACATCATT...GTCTACTTCACGTACTTGAAAAGGCTTTCCTTTACACTTCCAGGACCAAACAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp ATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGTTGACAAGTCACTTCTaGGAGAATTCTTCATTTTTC +
Preference number: 4 (lower is better)
Translates to: IFPLHRDSRRGRVKIKAKLTSHF*ENSSFF
Trigger: GAAAAATGAAGAATTCTCCCAGAAGTGACTTGTCAA...CTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp ATTCTGAGTTGTGTCACACAGGCTTTGACAATTAATGATGTACTAAAATGGGAAGAAGCATCTCCTCTGTaGCCACGTCTGTGTTATAAA +
Preference number: 4 (lower is better)
Translates to: ILSCVTQALTINDVLKWEEASPL*PRLCYK
Trigger: TTTATAACACAGACGTGGTCACAGAGGAGATGCTTC...TTCCCATTTTAGTACATCATTAATTGTCAAAGCCTGTGTGACACAACTCAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR TCA 90 bp ATTCTGAGTTGTGTCACACAGGCTTTGACAATTAATGATGTACTAAAATGGGAAGTCTTGCAAATTCGATaGAGCACAGAATACAGGGGA +
Preference number: 4 (lower is better)
Translates to: ILSCVTQALTINDVLKWEVLQIR*STEYRG
Trigger: TCCCCTGTATTCTGTGCTTCATCGAATTTGCAAGAC...TTCCCATTTTAGTACATCATTAATTGTCAAAGCCTGTGTGACACAACTCAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR TCA 90 bp AGTCGCGAAGTTTTACATTTACATCCAGTGAGCCTTGTGCTTACAAGTAGTTTTTACATTTACATCCAGTaGGCCTTGTGCTTACAAGTA +
Preference number: 4 (lower is better)
Translates to: SREVLHLHPVSLVLTSSFYIYIQ*ALCLQV
Trigger: TACTTGTAAGCACAAGGCTCACTGGATGTAAATGTA...AAAACTACTTGTAAGCACAAGGCTCACTGGATGTAAATGTAAAACTTCGCGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR GCA 90 bp ATTCTGAGTTGTGTCACACAGGCTTTGACAATTAATGATGTACTAAAATGGGAACCTCTTCTCCCAATCTaGTCATTCCTTTGCTTCGAA +
Preference number: 4 (lower is better)
Translates to: ILSCVTQALTINDVLKWEPLLPI*SFLCFE
Trigger: TTCGAAGCAAAGGAATGAGCAGATTGGGAGAAGAGG...TTCCCATTTTAGTACATCATTAATTGTCAAAGCCTGTGTGACACAACTCAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR GCA 90 bp ATTCTGAGTTGTGTCACACAGGCTTTGACAATTAATGATGTACTAAAATGGGAAATAAAACTCTCTGAGTaGTTGCAGCAGCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: ILSCVTQALTINDVLKWEIKLSE*LQQLLL
Trigger: AAGGAGGAGCTGCTGCAAGCACTCAGAGAGTTTTAT...TTCCCATTTTAGTACATCATTAATTGTCAAAGCCTGTGTGACACAACTCAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp ATTCTGAGTTGTGTCACACAGGCTTTGACAATTAATGATGTACTAAAATGGGAAAAATCTGGGCATCCCTaGCAGCATAAATTACCTGGT +
Preference number: 4 (lower is better)
Translates to: ILSCVTQALTINDVLKWEKSGHP*QHKLPG
Trigger: ACCAGGTAATTTATGCTGCCAGGGATGCCCAGATTT...TTCCCATTTTAGTACATCATTAATTGTCAAAGCCTGTGTGACACAACTCAGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp ATTCTGAGTTGTGTCACACAGGCTTTGACAATTAATGATGTACTAAAATGGGAACTTCCGGTACTCATGTaGAATCACGTTCTTCCGAAT +
Preference number: 4 (lower is better)
Translates to: ILSCVTQALTINDVLKWELPVLM*NHVLPN
Trigger: ATTCGGAAGAACGTGATTCCACATGAGTACCGGAAG...TTCCCATTTTAGTACATCATTAATTGTCAAAGCCTGTGTGACACAACTCAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp ACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATTTGACAAGTCACTTCTaGGAGAATTCTTCATTTTTC +
Preference number: 4 (lower is better)
Translates to: TINSPSNNIFAPAEASWDLTSHF*ENSSFF
Trigger: GAAAAATGAAGAATTCTCCCAGAAGTGACTTGTCAA...ATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp ATTCTGAGTTGTGTCACACAGGCTTTGACAATTAATGATGTACTAAAATGGGAACAGGAAGTTGCTGTTTaGTCCTGGAAGTGTAAAGGA +
Preference number: 4 (lower is better)
Translates to: ILSCVTQALTINDVLKWEQEVAV*SWKCKG
Trigger: TCCTTTACACTTCCAGGACCAAACAGCAACTTCCTG...TTCCCATTTTAGTACATCATTAATTGTCAAAGCCTGTGTGACACAACTCAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp AGTCGCGAAGTTTTACATTTACATCCAGTGAGCCTTGTGCTTACAAGTAGTTTTGCACATTCCTCAAAGTaGCTGGTACTATTTGTTTTC +
Preference number: 4 (lower is better)
Translates to: SREVLHLHPVSLVLTSSFAHSSK*LVLFVF
Trigger: GAAAACAAATAGTACCAGCCACTTTGAGGAATGTGC...AAAACTACTTGTAAGCACAAGGCTCACTGGATGTAAATGTAAAACTTCGCGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR CCA 90 bp ATTCTGAGTTGTGTCACACAGGCTTTGACAATTAATGATGTACTAAAATGGGAAGAACATAGTTTTCATTaGAGATTCTGGTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: ILSCVTQALTINDVLKWEEHSFH*RFWSPG
Trigger: GCCTGGAGACCAGAATCTCCAATGAAAACTATGTTC...TTCCCATTTTAGTACATCATTAATTGTCAAAGCCTGTGTGACACAACTCAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp ATAAATTTGACTCCTTGTTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCAATGATGTACTAAAATaGGAAGAGGTGACTCTTCAA +
Preference number: 4 (lower is better)
Translates to: INLTPCSLLQPLEELFLPNDVLK*EEVTLQ
Trigger: TTGAAGAGTCACCTCTTCCCATTTTAGTACATCATT...GGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAACAAGGAGTCAAATTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CCA 90 bp CAAAACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGTTGACAAGTCACTTCTaGGAGAATTCTTCATTTTTC +
Preference number: 4 (lower is better)
Translates to: QNHKLSFKQYLCSSRSILLTSHF*ENSSFF
Trigger: GAAAAATGAAGAATTCTCCCAGAAGTGACTTGTCAA...CAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGTTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CCA 90 bp ATTCTGAGTTGTGTCACACAGGCTTTGACAATTAATGATGTACTAAAATGGGAAAATGATGTACTAAAATaGGAAGAGGTGACTCTTCAA +
Preference number: 4 (lower is better)
Translates to: ILSCVTQALTINDVLKWENDVLK*EEVTLQ
Trigger: TTGAAGAGTCACCTCTTCCCATTTTAGTACATCATT...TTCCCATTTTAGTACATCATTAATTGTCAAAGCCTGTGTGACACAACTCAGAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS GCA 90 bp GGCAGGCTCTCCGCGTTGAGCAGGGCCCTGGCCCCAGAACGCACCTaGCGGCGCTCAGGATCTTCCAGCAGGCGCAAGCCCTCCTCAGAG +
Preference number: 5 (lower is better)
Translates to: GRLSALSRALAPERT*RRSGSSSRRKPSSE
Trigger: CTCTGAGGAGGGCTTGCGCCTGCTGGAAGATCCTGAGCGCCGGCAGGTGCGTTCTGGGGCCAGGGCCCTGCTCAACGCGGAGAGCCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
ENST00000492815.5
CDS TCA 90 bp CACTGCTGGGGCAGGTGCTTGGGCTGCATGGAGTCCAGGAAGTGCTaGCGCCAGCGGCTCTCCAGCTGCATGAGGGAGCGCAGGCCACCC +
Preference number: 5 (lower is better)
Translates to: HCWGRCLGCMESRKC*RQRLSSCMRERRPP
Trigger: GGGTGGCCTGCGCTCCCTCATGCAGCTGGAGAGCCGCTGGCGTCAGCACTTCCTGGACTCCATGCAGCCCAAGCACCTGCCCCAGCAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
ENST00000492815.5
CDS CCA 90 bp GAGGAGCTACCAGGTGCCGCGGGCGGGGCCTCCTTTTTAGCTGACTaGGACACGCAGCCTCGAAGGTCTGGTAGAGTCTCCCAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: EELPGAAGGASFLAD*DTQPRRSGRVSQGE
Trigger: CTCTCCCTGGGAGACTCTACCAGACCTTCGAGGCTGCGTGTCCCAGTCAGCTAAAAAGGAGGCCCCGCCCGCGGCACCTGGTAGCTCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409242.5
ENST00000409949.5
ENST00000413191.1
ENST00000461908.5
CDS CCA 90 bp GGCGCTCAGGATCTTCCAGCAGGCGCAAGCCCTCCTCAGAGCCGATaGGGGCCTGGAACTCCTTGGCCAGCTGCTGCTTCAGATGGTTGT +
Preference number: 5 (lower is better)
Translates to: GAQDLPAGASPPQSR*GPGTPWPAAASDGC
Trigger: ACAACCATCTGAAGCAGCAGCTGGCCAAGGAGTTCCAGGCCCCCATCGGCTCTGAGGAGGGCTTGCGCCTGCTGGAAGATCCTGAGCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
ENST00000492815.5
CDS GCA 90 bp AGGACAGTCTCCTCATACGAATCCAGGAGAGAAAACAGCAGCTGTTaGCGCGTCGAACCCGCAGCGCCCGAGGAGCTACCAGGTGCCGCG +
Preference number: 5 (lower is better)
Translates to: RTVSSYESRRENSSC*RVEPAAPEELPGAA
Trigger: CGCGGCACCTGGTAGCTCCTCGGGCGCTGCGGGTTCGACGCGGCAACAGCTGCTGTTTTCTCTCCTGGATTCGTATGAGGAGACTGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409949.5
ENST00000413191.1
ENST00000461908.5
CDS-3UTR CAA 90 bp TCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCGGCAGGCTCTCCGCGTaGAGCAGGGCCCTGGCCCCA +
Preference number: 5 (lower is better)
Translates to: SSAQGQQKRESKNKGEGLGRLSA*SRALAP
Trigger: TGGGGCCAGGGCCCTGCTCAACGCGGAGAGCCTGCC...GAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CAA 90 bp CTTTGGAAGAACTTTTTCTCCCCTCCTAACAGGACCGATATACTGGACAGCCCCGGCAGGCTCTCCGCGTaGAGCAGGGCCCTGGCCCCA +
Preference number: 5 (lower is better)
Translates to: LWKNFFSPPNRTDILDSPGRLSA*SRALAP
Trigger: TGGGGCCAGGGCCCTGCTCAACGCGGAGAGCCTGCC...GGGGCTGTCCAGTATATCGGTCCTGTTAGGAGGGGAGAAAAAGTTCTTCCAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS CCA 90 bp ATCTTCTGGAGGGGGCAGCTCTCTACTGCCCAGCACTTTCTGCTGTaGCTGTTGGGTCACAGGACTCGTTTTACTCCTTCGGCGGCGCTG +
Preference number: 5 (lower is better)
Translates to: IFWRGQLSTAQHFLL*LLGHRTRFTPSAAL
Trigger: CAGCGCCGCCGAAGGAGTAAAACGAGTCCTGTGACCCAACAGCCACAGCAGAAAGTGCTGGGCAGTAGAGAGCTGCCCCCTCCAGAAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409949.5
ENST00000413191.1
ENST00000492815.5
CDS CCA 90 bp GCAGGCGCAAGCCCTCCTCAGAGCCGATGGGGGCCTGGAACTCCTTaGCCAGCTGCTGCTTCAGATGGTTGTCATAGTAGTTGGAAATGG +
Preference number: 5 (lower is better)
Translates to: AGASPPQSRWGPGTP*PAAASDGCHSSWKW
Trigger: CCATTTCCAACTACTATGACAACCATCTGAAGCAGCAGCTGGCCAAGGAGTTCCAGGCCCCCATCGGCTCTGAGGAGGGCTTGCGCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
ENST00000492815.5
CDS-3UTR CAA 90 bp TCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCGGGGTGAGGCCCTCCTaGCGCACCTGGGTGCTGAAC +
Preference number: 5 (lower is better)
Translates to: SSAQGQQKRESKNKGEGLGVRPS*RTWVLN
Trigger: GTTCAGCACCCAGGTGCGCAAGGAGGGCCTCACCCC...GAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312994.9
ENST00000409242.5
ENST00000409949.5
CDS TCA 90 bp ATCTTCCCCGAATTTCCGGAGCAGCTTCTGATGGTTGTGGTCCACTaGCCACTGCTGGGGCAGGTGCTTGGGCTGCATGGAGTCCAGGAA +
Preference number: 5 (lower is better)
Translates to: IFPEFPEQLLMVVVH*PLLGQVLGLHGVQE
Trigger: TTCCTGGACTCCATGCAGCCCAAGCACCTGCCCCAGCAGTGGTCAGTGGACCACAACCATCAGAAGCTGCTCCGGAAATTCGGGGAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
ENST00000492815.5
CDS-3UTR CAA 90 bp AATGTATTAAGTAAGCTCAGTGTCCCAGGCTTCAGAGGAGACAGAGAAGTCCTCGGCAGGCTCTCCGCGTaGAGCAGGGCCCTGGCCCCA +
Preference number: 5 (lower is better)
Translates to: NVLSKLSVPGFRGDREVLGRLSA*SRALAP
Trigger: TGGGGCCAGGGCCCTGCTCAACGCGGAGAGCCTGCC...GAGGACTTCTCTGTCTCCTCTGAAGCCTGGGACACTGAGCTTACTTAATACATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS GCA 90 bp CACTGGAGTGCAGCTGATCATCTTCTGGAGGGGGCAGCTCTCTACTaGCCAGCACTTTCTGCTGTGGCTGTTGGGTCACAGGACTCGTTT +
Preference number: 5 (lower is better)
Translates to: HWSAADHLLEGAALY*PALSAVAVGSQDSF
Trigger: AAACGAGTCCTGTGACCCAACAGCCACAGCAGAAAGTGCTGGGCAGTAGAGAGCTGCCCCCTCCAGAAGATGATCAGCTGCACTCCAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409949.5
ENST00000413191.1
ENST00000492815.5
CDS-3UTR CAA 90 bp AGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGAGGGGCAGGCTCTCCGCGTaGAGCAGGGCCCTGGCCCCA +
Preference number: 5 (lower is better)
Translates to: RGRVKIKAKASLVHKNERGRLSA*SRALAP
Trigger: TGGGGCCAGGGCCCTGCTCAACGCGGAGAGCCTGCC...CCTCTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CAA 90 bp GGACAGCCCCTGTTAGAGATAAACCGAGGCACTAGACAAGGAAGAAATGCATTAGGGGTGAGGCCCTCCTaGCGCACCTGGGTGCTGAAC +
Preference number: 5 (lower is better)
Translates to: GQPLLEINRGTRQGRNALGVRPS*RTWVLN
Trigger: GTTCAGCACCCAGGTGCGCAAGGAGGGCCTCACCCC...TAATGCATTTCTTCCTTGTCTAGTGCCTCGGTTTATCTCTAACAGGGGCTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312994.9
ENST00000409949.5
CDS CCA 90 bp CCTTGGCCAGCTGCTGCTTCAGATGGTTGTCATAGTAGTTGGAAATaGCATGGCAGGAGGTGCAGAGCAGCAGCACATCGTGGGAGTTGT +
Preference number: 5 (lower is better)
Translates to: PWPAAASDGCHSSWK*HGRRCRAAAHRGSC
Trigger: ACAACTCCCACGATGTGCTGCTGCTCTGCACCTCCTGCCATGCCATTTCCAACTACTATGACAACCATCTGAAGCAGCAGCTGGCCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
ENST00000492815.5
CDS-3UTR CAA 90 bp AAGATAACATTACTCTCAGAAAGGGGTGAAGCTAAAAATCTTGCAGTTCTGGGGGGCAGGCTCTCCGCGTaGAGCAGGGCCCTGGCCCCA +
Preference number: 5 (lower is better)
Translates to: KITLLSERGEAKNLAVLGGRLSA*SRALAP
Trigger: TGGGGCCAGGGCCCTGCTCAACGCGGAGAGCCTGCC...CCCCAGAACTGCAAGATTTTTAGCTTCACCCCTTTCTGAGAGTAATGTTATCTT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CAA 90 bp CATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATTAGGCAGGCTCTCCGCGTaGAGCAGGGCCCTGGCCCCA +
Preference number: 5 (lower is better)
Translates to: HKLSFKQYLCSSRSILGLGRLSA*SRALAP
Trigger: TGGGGCCAGGGCCCTGCTCAACGCGGAGAGCCTGCC...TAATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS GCA 90 bp AAGCATCTCCTCTGTGACCACGTCTGTGTTATAAAACTCTCTGAGTaGTTGCAGCAGCTCCTCCTTTCGCTGAGTAGGCAGGCTCTCCGC +
Preference number: 5 (lower is better)
Translates to: KHLLCDHVCVIKLSE*LQQLLLSLSRQALR
Trigger: GCGGAGAGCCTGCCTACTCAGCGAAAGGAGGAGCTGCTGCAAGCACTCAGAGAGTTTTATAACACAGACGTGGTCACAGAGGAGATGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
ENST00000492815.5
CDS CCA 90 bp TGCAGAGCAGCAGCACATCGTGGGAGTTGTGGTCCTTCATCTCGATaGGGAAGTGCTTCCGGTACTCATGTGGAATCACGTTCTTCCGAA +
Preference number: 5 (lower is better)
Translates to: CRAAAHRGSCGPSSR*GSASGTHVESRSSE
Trigger: TTCGGAAGAACGTGATTCCACATGAGTACCGGAAGCACTTCCCCATCGAGATGAAGGACCACAACTCCCACGATGTGCTGCTGCTCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
ENST00000492815.5
CDS-3UTR CAA 90 bp AGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGGGGGTGAGGCCCTCCTaGCGCACCTGGGTGCTGAAC +
Preference number: 5 (lower is better)
Translates to: RRGRVKIKAKASLVHKNEGVRPS*RTWVLN
Trigger: GTTCAGCACCCAGGTGCGCAAGGAGGGCCTCACCCC...CTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000312994.9
ENST00000409242.5
ENST00000409949.5
CDS-3UTR CAA 90 bp AAGCTAAAAATCTTGCAGTTCTGGGGCAGGAGGAGTGCAACAAGCAGGCAACAAAGAAAACAGCAGCTGTaGCCGCGTCGAACCCGCAGC +
Preference number: 5 (lower is better)
Translates to: KLKILQFWGRRSATSRQQRKQQL*PRRTRS
Trigger: GCTGCGGGTTCGACGCGGCAACAGCTGCTGTTTTCT...TTGTTGCCTGCTTGTTGCACTCCTCCTGCCCCAGAACTGCAAGATTTTTAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR CAA 90 bp CCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCCTCCACAGATTAGCTaGGGCAGGCGAACCAAGACA +
Preference number: 5 (lower is better)
Translates to: PLHRDSRRGRVKIKAKASPPQIS*GRRTKT
Trigger: TGTCTTGGTTCGCCTGCCCAAGCTAATCTGTGGAGG...AGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CAA 90 bp TCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCGGTGACTCTTCAACCTaGGCTCCAGCTTCCCACTTG +
Preference number: 5 (lower is better)
Translates to: SSAQGQQKRESKNKGEGLGDSST*APASHL
Trigger: CAAGTGGGAAGCTGGAGCCAAGGTTGAAGAGTCACC...GAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS TCA 90 bp GGCTCTTCACTCACCAGCTCACCAATGCCTTTGTCCAGGTACCACTaGGCTTTTCTTCTATCACAAGTGCAGAGGGGCTGTCCATCAGGA +
Preference number: 5 (lower is better)
Translates to: GSSLTSSPMPLSRYH*AFLLSQVQRGCPSG
Trigger: TCCTGATGGACAGCCCCTCTGCACTTGTGATAGAAGAAAAGCTCAGTGGTACCTGGACAAAGGCATTGGTGAGCTGGTGAGTGAAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
ENST00000465286.1
ENST00000492815.5
CDS TCA 90 bp ACTTCTCTGGAAGGTGCGGCAGTGAGGGAGTGGAGGAAACAGGTTTaGCTCAACACTTTCTGTTGCTCCAGAAGGCTCAGCAGTTCTCCA +
Preference number: 5 (lower is better)
Translates to: TSLEGAAVREWRKQV*LNTFCCSRRLSSSP
Trigger: TGGAGAACTGCTGAGCCTTCTGGAGCAACAGAAAGTGTTGAGTCAAACCTGTTTCCTCCACTCCCTCACTGCCGCACCTTCCAGAGAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461908.5
ENST00000487724.5
CDS CCA 90 bp GAGGTGACTCTTCAACCTTGGCTCCAGCTTCCCACTTGTCCTAACTaGGAGGAAAGCAGCTATCAAGACAGCTGGATGGGAAGATCTTCC +
Preference number: 5 (lower is better)
Translates to: EVTLQPWLQLPTCPN*EESSYQDSWMGRSS
Trigger: GGAAGATCTTCCCATCCAGCTGTCTTGATAGCTGCTTTCCTCCCAGTTAGGACAAGTGGGAAGCTGGAGCCAAGGTTGAAGAGTCACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
ENST00000492815.5
CDS-3UTR CAA 90 bp GGACAGCCCCTGTTAGAGATAAACCGAGGCACTAGACAAGGAAGAAATGCATTATCTCTCCCTTGGTGGTaGCCTGGCACCATCCCATCC +
Preference number: 5 (lower is better)
Translates to: GQPLLEINRGTRQGRNALSLPWW*PGTIPS
Trigger: GGATGGGATGGTGCCAGGCAACCACCAAGGGAGAGA...TAATGCATTTCTTCCTTGTCTAGTGCCTCGGTTTATCTCTAACAGGGGCTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CAA 90 bp TCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCAAACTCTCTGAGTGCTaGCAGCAGCTCCTCCTTTCG +
Preference number: 5 (lower is better)
Translates to: SSAQGQQKRESKNKGEGLKLSEC*QQLLLS
Trigger: CGAAAGGAGGAGCTGCTGCAAGCACTCAGAGAGTTT...GAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CAA 90 bp CTTTGGAAGAACTTTTTCTCCCCTCCTAACAGGACCGATATACTGGACAGCCCCGTCTCAGCATCCCAGTaGCTGCAACGAAGTAGAAGG +
Preference number: 5 (lower is better)
Translates to: LWKNFFSPPNRTDILDSPVSASQ*LQRSRR
Trigger: CCTTCTACTTCGTTGCAGCAACTGGGATGCTGAGAC...GGGGCTGTCCAGTATATCGGTCCTGTTAGGAGGGGAGAAAAAGTTCTTCCAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CAA 90 bp ATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGTCTCTCCCTTGGTGGTaGCCTGGCACCATCCCATCC +
Preference number: 5 (lower is better)
Translates to: IFPLHRDSRRGRVKIKAKSLPWW*PGTIPS
Trigger: GGATGGGATGGTGCCAGGCAACCACCAAGGGAGAGA...CTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CAA 90 bp CTTTGGAAGAACTTTTTCTCCCCTCCTAACAGGACCGATATACTGGACAGCCCCAGCACATCGTGGGAGTaGTGGTCCTTCATCTCGATG +
Preference number: 5 (lower is better)
Translates to: LWKNFFSPPNRTDILDSPSTSWE*WSFISM
Trigger: CATCGAGATGAAGGACCACAACTCCCACGATGTGCT...GGGGCTGTCCAGTATATCGGTCCTGTTAGGAGGGGAGAAAAAGTTCTTCCAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CAA 90 bp CCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTAGGCGAAGGCCTCTCTaGTCCACAAAAATGAGAGGA +
Preference number: 5 (lower is better)
Translates to: PLHRDSRRGRVKIKAKASRRRPL*STKMRG
Trigger: TCCTCTCATTTTTGTGGACAAGAGAGGCCTTCGCCT...AGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CAA 90 bp TCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCGTGAAGCTAAAAATCTaGCAGTTCTGGGGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: SSAQGQQKRESKNKGEGLVKLKI*QFWGRR
Trigger: CCTCCTGCCCCAGAACTGCAAGATTTTTAGCTTCAC...GAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CAA 90 bp TTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCTCCTAACAGGACCGATACCTCCACAGATTAGCTaGGGCAGGCGAACCAAGACA +
Preference number: 5 (lower is better)
Translates to: FTSPAFGRTFSPLLTGPIPPQIS*GRRTKT
Trigger: TGTCTTGGTTCGCCTGCCCAAGCTAATCTGTGGAGG...TATCGGTCCTGTTAGGAGGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CAA 90 bp ACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATTCTCTCCCTTGGTGGTaGCCTGGCACCATCCCATCC +
Preference number: 5 (lower is better)
Translates to: TINSPSNNIFAPAEASWDSLPWW*PGTIPS
Trigger: GGATGGGATGGTGCCAGGCAACCACCAAGGGAGAGA...ATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CAA 90 bp AAGCTAAAAATCTTGCAGTTCTGGGGCAGGAGGAGTGCAACAAGCAGGCAACAAAGCACATCGTGGGAGTaGTGGTCCTTCATCTCGATG +
Preference number: 5 (lower is better)
Translates to: KLKILQFWGRRSATSRQQSTSWE*WSFISM
Trigger: CATCGAGATGAAGGACCACAACTCCCACGATGTGCT...TTGTTGCCTGCTTGTTGCACTCCTCCTGCCCCAGAACTGCAAGATTTTTAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CAA 90 bp AATGTATTAAGTAAGCTCAGTGTCCCAGGCTTCAGAGGAGACAGAGAAGTCCTCGGTGACTCTTCAACCTaGGCTCCAGCTTCCCACTTG +
Preference number: 5 (lower is better)
Translates to: NVLSKLSVPGFRGDREVLGDSST*APASHL
Trigger: CAAGTGGGAAGCTGGAGCCAAGGTTGAAGAGTCACC...GAGGACTTCTCTGTCTCCTCTGAAGCCTGGGACACTGAGCTTACTTAATACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CAA 90 bp TCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCACTTCTCCAGCCTTaGGAAGAACTTTTTCTCCCC +
Preference number: 5 (lower is better)
Translates to: SSAQGQQKRESKNKGEGLSLLQP*EELFLP
Trigger: GGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGA...GAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CAA 90 bp TCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCGACAGAGGGCTGGCTTaGCCTTCCAAATTTACTACT +
Preference number: 5 (lower is better)
Translates to: SSAQGQQKRESKNKGEGLDRGLA*PSKFTT
Trigger: AGTAGTAAATTTGGAAGGCAAAGCCAGCCCTCTGTC...GAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409014.5
CDS CCA 90 bp CACACAGGCCACTTGGGGAGGCCATTTGTAGAAGTGACAGAGGGCTaGCTTTGCCTTCCAAATTTACTACTATATGTTCACACTGTGCTG +
Preference number: 5 (lower is better)
Translates to: HTGHLGRPFVEVTEG*LCLPNLLLYVHTVL
Trigger: CAGCACAGTGTGAACATATAGTAGTAAATTTGGAAGGCAAAGCCAGCCCTCTGTCACTTCTACAAATGGCCTCCCCAAGTGGCCTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409014.5
ENST00000413191.1
CDS-3UTR CAA 90 bp AGAATTCTTCATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAGAAAACAGCAGCTGTaGCCGCGTCGAACCCGCAGC +
Preference number: 5 (lower is better)
Translates to: RILHFSSAQGQQKRESKNRKQQL*PRRTRS
Trigger: GCTGCGGGTTCGACGCGGCAACAGCTGCTGTTTTCT...ATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAATGAAGAATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000312994.9
ENST00000409242.5
ENST00000409949.5
CDS-3UTR CAA 90 bp GCTGTTTGGTCCTGGAAGTGTAAAGGAAAGCCTTTTCAAGTACGTGAAGTAGACCCTCCACAGATTAGCTaGGGCAGGCGAACCAAGACA +
Preference number: 5 (lower is better)
Translates to: AVWSWKCKGKPFQVREVDPPQIS*GRRTKT
Trigger: TGTCTTGGTTCGCCTGCCCAAGCTAATCTGTGGAGG...GTCTACTTCACGTACTTGAAAAGGCTTTCCTTTACACTTCCAGGACCAAACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CAA 90 bp ATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGCCTCCACAGATTAGCTaGGGCAGGCGAACCAAGACA +
Preference number: 5 (lower is better)
Translates to: IFPLHRDSRRGRVKIKAKPPQIS*GRRTKT
Trigger: TGTCTTGGTTCGCCTGCCCAAGCTAATCTGTGGAGG...CTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CAA 90 bp CTTTGGAAGAACTTTTTCTCCCCTCCTAACAGGACCGATATACTGGACAGCCCCCCATTACAGAGCAAATaGTTTCTCTGCCGCATGGCT +
Preference number: 5 (lower is better)
Translates to: LWKNFFSPPNRTDILDSPPLQSK*FLCRMA
Trigger: AGCCATGCGGCAGAGAAACAATTTGCTCTGTAATGG...GGGGCTGTCCAGTATATCGGTCCTGTTAGGAGGGGAGAAAAAGTTCTTCCAAAG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CAA 90 bp GGACAGCCCCTGTTAGAGATAAACCGAGGCACTAGACAAGGAAGAAATGCATTAGTCTCAGCATCCCAGTaGCTGCAACGAAGTAGAAGG +
Preference number: 5 (lower is better)
Translates to: GQPLLEINRGTRQGRNALVSASQ*LQRSRR
Trigger: CCTTCTACTTCGTTGCAGCAACTGGGATGCTGAGAC...TAATGCATTTCTTCCTTGTCTAGTGCCTCGGTTTATCTCTAACAGGGGCTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CAA 90 bp AGAATTCTTCATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATTCTCTCCCTTGGTGGTaGCCTGGCACCATCCCATCC +
Preference number: 5 (lower is better)
Translates to: RILHFSSAQGQQKRESKNSLPWW*PGTIPS
Trigger: GGATGGGATGGTGCCAGGCAACCACCAAGGGAGAGA...ATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAATGAAGAATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CAA 90 bp AAGATAACATTACTCTCAGAAAGGGGTGAAGCTAAAAATCTTGCAGTTCTGGGGTCTCTCCCTTGGTGGTaGCCTGGCACCATCCCATCC +
Preference number: 5 (lower is better)
Translates to: KITLLSERGEAKNLAVLGSLPWW*PGTIPS
Trigger: GGATGGGATGGTGCCAGGCAACCACCAAGGGAGAGA...CCCCAGAACTGCAAGATTTTTAGCTTCACCCCTTTCTGAGAGTAATGTTATCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CAA 90 bp GGACAGCCCCTGTTAGAGATAAACCGAGGCACTAGACAAGGAAGAAATGCATTAAGCACATCGTGGGAGTaGTGGTCCTTCATCTCGATG +
Preference number: 5 (lower is better)
Translates to: GQPLLEINRGTRQGRNALSTSWE*WSFISM
Trigger: CATCGAGATGAAGGACCACAACTCCCACGATGTGCT...TAATGCATTTCTTCCTTGTCTAGTGCCTCGGTTTATCTCTAACAGGGGCTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CAA 90 bp GGACAGCCCCTGTTAGAGATAAACCGAGGCACTAGACAAGGAAGAAATGCATTAAAACTCTCTGAGTGCTaGCAGCAGCTCCTCCTTTCG +
Preference number: 5 (lower is better)
Translates to: GQPLLEINRGTRQGRNALKLSEC*QQLLLS
Trigger: CGAAAGGAGGAGCTGCTGCAAGCACTCAGAGAGTTT...TAATGCATTTCTTCCTTGTCTAGTGCCTCGGTTTATCTCTAACAGGGGCTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CAA 90 bp GCTGTTTGGTCCTGGAAGTGTAAAGGAAAGCCTTTTCAAGTACGTGAAGTAGACGGTGACTCTTCAACCTaGGCTCCAGCTTCCCACTTG +
Preference number: 5 (lower is better)
Translates to: AVWSWKCKGKPFQVREVDGDSST*APASHL
Trigger: CAAGTGGGAAGCTGGAGCCAAGGTTGAAGAGTCACC...GTCTACTTCACGTACTTGAAAAGGCTTTCCTTTACACTTCCAGGACCAAACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CAA 90 bp AAGCTAAAAATCTTGCAGTTCTGGGGCAGGAGGAGTGCAACAAGCAGGCAACAAGTGAAGCTAAAAATCTaGCAGTTCTGGGGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: KLKILQFWGRRSATSRQQVKLKI*QFWGRR
Trigger: CCTCCTGCCCCAGAACTGCAAGATTTTTAGCTTCAC...TTGTTGCCTGCTTGTTGCACTCCTCCTGCCCCAGAACTGCAAGATTTTTAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS GCA 90 bp GGCCACTTGGGGAGGCCATTTGTAGAAGTGACAGAGGGCTGGCTTTaGCTTCCAAATTTACTACTATATGTTCACACTGTGCTGAATCCT +
Preference number: 5 (lower is better)
Translates to: GHLGRPFVEVTEGWL*LPNLLLYVHTVLNP
Trigger: AGGATTCAGCACAGTGTGAACATATAGTAGTAAATTTGGAAGGCAAAGCCAGCCCTCTGTCACTTCTACAAATGGCCTCCCCAAGTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409014.5
ENST00000413191.1
CDS CCA 90 bp GTGGTTGCCTGGCACCATCCCATCCATCTTAGACTTCTTATTTCTTaGCTTCTGCTGAGATTCTGTTGCTTCCCCATTAACCTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: VVAWHHPIHLRLLIS*LLLRFCCFPINLFS
Trigger: GGAGAAGAGGTTAATGGGGAAGCAACAGAATCTCAGCAGAAGCCAAGAAATAAGAAGTCTAAGATGGATGGGATGGTGCCAGGCAACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
ENST00000492815.5
CDS-3UTR CAA 90 bp AGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGGGTGACTCTTCAACCTaGGCTCCAGCTTCCCACTTG +
Preference number: 5 (lower is better)
Translates to: RRGRVKIKAKASLVHKNEGDSST*APASHL
Trigger: CAAGTGGGAAGCTGGAGCCAAGGTTGAAGAGTCACC...CTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CAA 90 bp CCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTCAAACAATATCTTaGCTCCAGCAGAAGCATCCT +
Preference number: 5 (lower is better)
Translates to: PLHRDSRRGRVKIKAKASLQTIS*LQQKHP
Trigger: AGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAG...AGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CAA 90 bp TTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCTCCTAACAGGACCGATAGTGAAGCTAAAAATCTaGCAGTTCTGGGGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: FTSPAFGRTFSPLLTGPIVKLKI*QFWGRR
Trigger: CCTCCTGCCCCAGAACTGCAAGATTTTTAGCTTCAC...TATCGGTCCTGTTAGGAGGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CAA 90 bp CTTTGGAAGAACTTTTTCTCCCCTCCTAACAGGACCGATATACTGGACAGCCCCAGAGAAGTCCTCATATaGCAACCTGACCAGATGACT +
Preference number: 5 (lower is better)
Translates to: LWKNFFSPPNRTDILDSPREVLI*QPDQMT
Trigger: AGTCATCTGGTCAGGTTGCAATATGAGGACTTCTCT...GGGGCTGTCCAGTATATCGGTCCTGTTAGGAGGGGAGAAAAAGTTCTTCCAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CAA 90 bp ATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGACAGAGGGCTGGCTTaGCCTTCCAAATTTACCTGC +
Preference number: 5 (lower is better)
Translates to: IFPLHRDSRRGRVKIKAKDRGLA*PSKFTC
Trigger: GCAGGTAAATTTGGAAGGCAAAGCCAGCCCTCTGTC...CTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409675.5
CDS CCA 90 bp CCCATTAACCTCTTCTCCCAATCTGCTCATTCCTTTGCTTCGAAATaGGATGTCGACCACACCCTGGCATTTTTCCAAGACTTTTCTCCA +
Preference number: 5 (lower is better)
Translates to: PINLFSQSAHSFASK*DVDHTLAFFQDFSP
Trigger: TGGAGAAAAGTCTTGGAAAAATGCCAGGGTGTGGTCGACATCCCATTTCGAAGCAAAGGAATGAGCAGATTGGGAGAAGAGGTTAATGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
ENST00000492815.5
CDS-3UTR CAA 90 bp ACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATGACAGAGGGCTGGCTTaGCCTTCCAAATTTACCCAC +
Preference number: 5 (lower is better)
Translates to: TINSPSNNIFAPAEASWDDRGLA*PSKFTH
Trigger: GTGGGTAAATTTGGAAGGCAAAGCCAGCCCTCTGTC...ATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409018.7
ENST00000409242.5
ENST00000409949.5
CDS-3UTR CAA 90 bp CAAAACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGCCTCCACAGATTAGCTaGGGCAGGCGAACCAAGACA +
Preference number: 5 (lower is better)
Translates to: QNHKLSFKQYLCSSRSILPPQIS*GRRTKT
Trigger: TGTCTTGGTTCGCCTGCCCAAGCTAATCTGTGGAGG...CAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CAA 90 bp CCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTTATCCAATAACGTTCTaGGTAGTGTTTTTCCTCCAC +
Preference number: 5 (lower is better)
Translates to: PLHRDSRRGRVKIKAKASYPITF*VVFFLH
Trigger: GTGGAGGAAAAACACTACCAAGAACGTTATTGGATA...AGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CAA 90 bp ACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATGTCTCAGCATCCCAGTaGCTGCAACGAAGTAGAAGG +
Preference number: 5 (lower is better)
Translates to: TINSPSNNIFAPAEASWDVSASQ*LQRSRR
Trigger: CCTTCTACTTCGTTGCAGCAACTGGGATGCTGAGAC...ATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CAA 90 bp AGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGAAACTCTCTGAGTGCTaGCAGCAGCTCCTCCTTTCG +
Preference number: 5 (lower is better)
Translates to: RRGRVKIKAKASLVHKNEKLSEC*QQLLLS
Trigger: CGAAAGGAGGAGCTGCTGCAAGCACTCAGAGAGTTT...CTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CAA 90 bp CATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATTAGGTGACTCTTCAACCTaGGCTCCAGCTTCCCACTTG +
Preference number: 5 (lower is better)
Translates to: HKLSFKQYLCSSRSILGLGDSST*APASHL
Trigger: CAAGTGGGAAGCTGGAGCCAAGGTTGAAGAGTCACC...TAATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CAA 90 bp AGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGAGGAGGCGAAGGCCTCTCTaGTCCACAAAAATGAGAGGA +
Preference number: 5 (lower is better)
Translates to: RGRVKIKAKASLVHKNERRRRPL*STKMRG
Trigger: TCCTCTCATTTTTGTGGACAAGAGAGGCCTTCGCCT...CCTCTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CAA 90 bp GGACAGCCCCTGTTAGAGATAAACCGAGGCACTAGACAAGGAAGAAATGCATTATCACTTCTCCAGCCTTaGGAAGAACTTTTTCTCCCC +
Preference number: 5 (lower is better)
Translates to: GQPLLEINRGTRQGRNALSLLQP*EELFLP
Trigger: GGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGA...TAATGCATTTCTTCCTTGTCTAGTGCCTCGGTTTATCTCTAACAGGGGCTGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS CCA 90 bp AATCTGCTCATTCCTTTGCTTCGAAATGGGATGTCGACCACACCCTaGCATTTTTCCAAGACTTTTCTCCAGCTACTGTGGTCATCGTTT +
Preference number: 5 (lower is better)
Translates to: NLLIPLLRNGMSTTP*HFSKTFLQLLWSSF
Trigger: AAACGATGACCACAGTAGCTGGAGAAAAGTCTTGGAAAAATGCCAGGGTGTGGTCGACATCCCATTTCGAAGCAAAGGAATGAGCAGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
ENST00000492815.5
CDS-3UTR CAA 90 bp ACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATTTTCTGCTGTGGCTGTaGGGTCACAGGACTCGTTTT +
Preference number: 5 (lower is better)
Translates to: TINSPSNNIFAPAEASWDFLLWL*GHRTRF
Trigger: AAAACGAGTCCTGTGACCCAACAGCCACAGCAGAAA...ATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409949.5
CDS-3UTR CAA 90 bp ATAAATTTGACTCCTTGTTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCGACAGAGGGCTGGCTTaGCCTTCCAAATTTACCCAC +
Preference number: 5 (lower is better)
Translates to: INLTPCSLLQPLEELFLPDRGLA*PSKFTH
Trigger: GTGGGTAAATTTGGAAGGCAAAGCCAGCCCTCTGTC...GGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAACAAGGAGTCAAATTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312994.9
ENST00000409018.7
CDS-3UTR CAA 90 bp CAAAACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGACAGAGGGCTGGCTTaGCCTTCCAAATTTACCCAC +
Preference number: 5 (lower is better)
Translates to: QNHKLSFKQYLCSSRSILDRGLA*PSKFTH
Trigger: GTGGGTAAATTTGGAAGGCAAAGCCAGCCCTCTGTC...CAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409018.7
ENST00000409242.5
ENST00000409949.5
CDS-3UTR CAA 90 bp CTTTGGAAGAACTTTTTCTCCCCTCCTAACAGGACCGATATACTGGACAGCCCCTATCCAATAACGTTCTaGGTAGTGTTTTTCCTCCAC +
Preference number: 5 (lower is better)
Translates to: LWKNFFSPPNRTDILDSPYPITF*VVFFLH
Trigger: GTGGAGGAAAAACACTACCAAGAACGTTATTGGATA...GGGGCTGTCCAGTATATCGGTCCTGTTAGGAGGGGAGAAAAAGTTCTTCCAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CAA 90 bp GCTGTTTGGTCCTGGAAGTGTAAAGGAAAGCCTTTTCAAGTACGTGAAGTAGACCCATTACAGAGCAAATaGTTTCTCTGCCGCATGGCT +
Preference number: 5 (lower is better)
Translates to: AVWSWKCKGKPFQVREVDPLQSK*FLCRMA
Trigger: AGCCATGCGGCAGAGAAACAATTTGCTCTGTAATGG...GTCTACTTCACGTACTTGAAAAGGCTTTCCTTTACACTTCCAGGACCAAACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CAA 90 bp AGAATTCTTCATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATGTCTCAGCATCCCAGTaGCTGCAACGAAGTAGAAGG +
Preference number: 5 (lower is better)
Translates to: RILHFSSAQGQQKRESKNVSASQ*LQRSRR
Trigger: CCTTCTACTTCGTTGCAGCAACTGGGATGCTGAGAC...ATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAATGAAGAATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CAA 90 bp ATAAATTTGACTCCTTGTTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCGTCTCAGCATCCCAGTaGCTGCAACGAAGTAGAAGG +
Preference number: 5 (lower is better)
Translates to: INLTPCSLLQPLEELFLPVSASQ*LQRSRR
Trigger: CCTTCTACTTCGTTGCAGCAACTGGGATGCTGAGAC...GGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAACAAGGAGTCAAATTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CAA 90 bp TTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCTCCTAACAGGACCGATAAATCTGCTCATTCCTTaGCTTCGAAATGGGATGTCG +
Preference number: 5 (lower is better)
Translates to: FTSPAFGRTFSPLLTGPINLLIP*LRNGMS
Trigger: CGACATCCCATTTCGAAGCAAAGGAATGAGCAGATT...TATCGGTCCTGTTAGGAGGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CAA 90 bp AAGATAACATTACTCTCAGAAAGGGGTGAAGCTAAAAATCTTGCAGTTCTGGGGAGCACATCGTGGGAGTaGTGGTCCTTCATCTCGATG +
Preference number: 5 (lower is better)
Translates to: KITLLSERGEAKNLAVLGSTSWE*WSFISM
Trigger: CATCGAGATGAAGGACCACAACTCCCACGATGTGCT...CCCCAGAACTGCAAGATTTTTAGCTTCACCCCTTTCTGAGAGTAATGTTATCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CAA 90 bp CAAAACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGAGCACATCGTGGGAGTaGTGGTCCTTCATCTCGATG +
Preference number: 5 (lower is better)
Translates to: QNHKLSFKQYLCSSRSILSTSWE*WSFISM
Trigger: CATCGAGATGAAGGACCACAACTCCCACGATGTGCT...CAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CAA 90 bp ATAAATTTGACTCCTTGTTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCAAACTCTCTGAGTGCTaGCAGCAGCTCCTCCTTTCG +
Preference number: 5 (lower is better)
Translates to: INLTPCSLLQPLEELFLPKLSEC*QQLLLS
Trigger: CGAAAGGAGGAGCTGCTGCAAGCACTCAGAGAGTTT...GGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAACAAGGAGTCAAATTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS CCA 90 bp ACAATTAATGATGTACTAAAATGGGAAGAGGTGACTCTTCAACCTTaGCTCCAGCTTCCCACTTGTCCTAACTGGGAGGAAAGCAGCTAT +
Preference number: 5 (lower is better)
Translates to: TINDVLKWEEVTLQP*LQLPTCPNWEESSY
Trigger: ATAGCTGCTTTCCTCCCAGTTAGGACAAGTGGGAAGCTGGAGCCAAGGTTGAAGAGTCACCTCTTCCCATTTTAGTACATCATTAATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
ENST00000492815.5
CDS-3UTR CAA 90 bp ATAAATTTGACTCCTTGTTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCTTTCTGCTGTGGCTGTaGGGTCACAGGACTCGTTTT +
Preference number: 5 (lower is better)
Translates to: INLTPCSLLQPLEELFLPFLLWL*GHRTRF
Trigger: AAAACGAGTCCTGTGACCCAACAGCCACAGCAGAAA...GGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAACAAGGAGTCAAATTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
CDS-3UTR CAA 90 bp CAAAACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGTTTCTGCTGTGGCTGTaGGGTCACAGGACTCGTTTT +
Preference number: 5 (lower is better)
Translates to: QNHKLSFKQYLCSSRSILFLLWL*GHRTRF
Trigger: AAAACGAGTCCTGTGACCCAACAGCCACAGCAGAAA...CAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409949.5
CDS-3UTR CAA 90 bp ACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATCCATTACAGAGCAAATaGTTTCTCTGCCGCATGGCT +
Preference number: 5 (lower is better)
Translates to: TINSPSNNIFAPAEASWDPLQSK*FLCRMA
Trigger: AGCCATGCGGCAGAGAAACAATTTGCTCTGTAATGG...ATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CAA 90 bp AGTCGCGAAGTTTTACATTTACATCCAGTGAGCCTTGTGCTTACAAGTAGTTTTGTCTCAGCATCCCAGTaGCTGCAACGAAGTAGAAGG +
Preference number: 5 (lower is better)
Translates to: SREVLHLHPVSLVLTSSFVSASQ*LQRSRR
Trigger: CCTTCTACTTCGTTGCAGCAACTGGGATGCTGAGAC...AAAACTACTTGTAAGCACAAGGCTCACTGGATGTAAATGTAAAACTTCGCGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR CAA 90 bp ATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGAATCTGCTCATTCCTTaGCTTCGAAATGGGATGTCG +
Preference number: 5 (lower is better)
Translates to: IFPLHRDSRRGRVKIKAKNLLIP*LRNGMS
Trigger: CGACATCCCATTTCGAAGCAAAGGAATGAGCAGATT...CTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CAA 90 bp AAGATAACATTACTCTCAGAAAGGGGTGAAGCTAAAAATCTTGCAGTTCTGGGGAGGCGAAGGCCTCTCTaGTCCACAAAAATGAGAGGA +
Preference number: 5 (lower is better)
Translates to: KITLLSERGEAKNLAVLGRRRPL*STKMRG
Trigger: TCCTCTCATTTTTGTGGACAAGAGAGGCCTTCGCCT...CCCCAGAACTGCAAGATTTTTAGCTTCACCCCTTTCTGAGAGTAATGTTATCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CAA 90 bp ATAAATTTGACTCCTTGTTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCAGGCGAAGGCCTCTCTaGTCCACAAAAATGAGAGGA +
Preference number: 5 (lower is better)
Translates to: INLTPCSLLQPLEELFLPRRRPL*STKMRG
Trigger: TCCTCTCATTTTTGTGGACAAGAGAGGCCTTCGCCT...GGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAACAAGGAGTCAAATTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CAA 90 bp CAAAACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGTGAAGCTAAAAATCTaGCAGTTCTGGGGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: QNHKLSFKQYLCSSRSILVKLKI*QFWGRR
Trigger: CCTCCTGCCCCAGAACTGCAAGATTTTTAGCTTCAC...CAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CAA 90 bp ATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAAAGGCGAAGAGAGAAGTCCTCATATaGCAACCTGACCAGATGACT +
Preference number: 5 (lower is better)
Translates to: IFPLHRDSRRGRVKIKAKREVLI*QPDQMT
Trigger: AGTCATCTGGTCAGGTTGCAATATGAGGACTTCTCT...CTTCGCCTTTATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS CCA 90 bp GAAGCTTGCTGGCATCTTCTGAGCATCCCACTCCAACTTTCAAAATaGTGCCATCTGCCAAAATATCCAATAACGTTCTTGGTAGTGTTT +
Preference number: 5 (lower is better)
Translates to: EACWHLLSIPLQLSK*CHLPKYPITFLVVF
Trigger: AAACACTACCAAGAACGTTATTGGATATTTTGGCAGATGGCACCATTTTGAAAGTTGGAGTGGGATGCTCAGAAGATGCCAGCAAGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
ENST00000413191.1
ENST00000489133.6
ENST00000492815.5
ENST00000494629.1
CDS-3UTR CAA 90 bp GGACAGCCCCTGTTAGAGATAAACCGAGGCACTAGACAAGGAAGAAATGCATTATATCCAATAACGTTCTaGGTAGTGTTTTTCCTCCAC +
Preference number: 5 (lower is better)
Translates to: GQPLLEINRGTRQGRNALYPITF*VVFFLH
Trigger: GTGGAGGAAAAACACTACCAAGAACGTTATTGGATA...TAATGCATTTCTTCCTTGTCTAGTGCCTCGGTTTATCTCTAACAGGGGCTGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CAA 90 bp AGAATTCTTCATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATCCATTACAGAGCAAATaGTTTCTCTGCCGCATGGCT +
Preference number: 5 (lower is better)
Translates to: RILHFSSAQGQQKRESKNPLQSK*FLCRMA
Trigger: AGCCATGCGGCAGAGAAACAATTTGCTCTGTAATGG...ATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAATGAAGAATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CAA 90 bp CAAAACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGCCATTACAGAGCAAATaGTTTCTCTGCCGCATGGCT +
Preference number: 5 (lower is better)
Translates to: QNHKLSFKQYLCSSRSILPLQSK*FLCRMA
Trigger: AGCCATGCGGCAGAGAAACAATTTGCTCTGTAATGG...CAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CAA 90 bp AGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGAATCTGCTCATTCCTTaGCTTCGAAATGGGATGTCG +
Preference number: 5 (lower is better)
Translates to: RRGRVKIKAKASLVHKNENLLIP*LRNGMS
Trigger: CGACATCCCATTTCGAAGCAAAGGAATGAGCAGATT...CTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CAA 90 bp ATTCTGAGTTGTGTCACACAGGCTTTGACAATTAATGATGTACTAAAATGGGAAGGTGACTCTTCAACCTaGGCTCCAGCTTCCCACTTG +
Preference number: 5 (lower is better)
Translates to: ILSCVTQALTINDVLKWEGDSST*APASHL
Trigger: CAAGTGGGAAGCTGGAGCCAAGGTTGAAGAGTCACC...TTCCCATTTTAGTACATCATTAATTGTCAAAGCCTGTGTGACACAACTCAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CAA 90 bp CCCCAGCAATGTGAATCCCCCTCTTCACAGTCCAATTCTAAGATTCCATTCTTACTTCAAACAATATCTTaGCTCCAGCAGAAGCATCCT +
Preference number: 5 (lower is better)
Translates to: PQQCESPSSQSNSKIPFLLQTIS*LQQKHP
Trigger: AGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAG...TAAGAATGGAATCTTAGAATTGGACTGTGAAGAGGGGGATTCACATTGCTGGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR CAA 90 bp AGAATTCTTCATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATTCACTTCTCCAGCCTTaGGAAGAACTTTTTCTCCCC +
Preference number: 5 (lower is better)
Translates to: RILHFSSAQGQQKRESKNSLLQP*EELFLP
Trigger: GGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGA...ATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAATGAAGAATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CAA 90 bp CAAAACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGTCACTTCTCCAGCCTTaGGAAGAACTTTTTCTCCCC +
Preference number: 5 (lower is better)
Translates to: QNHKLSFKQYLCSSRSILSLLQP*EELFLP
Trigger: GGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGA...CAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CAA 90 bp ACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATAGAGAAGTCCTCATATaGCAACCTGACCAGATGACT +
Preference number: 5 (lower is better)
Translates to: TINSPSNNIFAPAEASWDREVLI*QPDQMT
Trigger: AGTCATCTGGTCAGGTTGCAATATGAGGACTTCTCT...ATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS GCA 90 bp ATCCATCTTAGACTTCTTATTTCTTGGCTTCTGCTGAGATTCTGTTaGTTCCCCATTAACCTCTTCTCCCAATCTGCTCATTCCTTTGCT +
Preference number: 5 (lower is better)
Translates to: IHLRLLISWLLLRFC*FPINLFSQSAHSFA
Trigger: AGCAAAGGAATGAGCAGATTGGGAGAAGAGGTTAATGGGGAAGCAACAGAATCTCAGCAGAAGCCAAGAAATAAGAAGTCTAAGATGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
ENST00000492815.5
CDS-3UTR CAA 90 bp AGAATTCTTCATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAATCTGCTCATTCCTTaGCTTCGAAATGGGATGTCG +
Preference number: 5 (lower is better)
Translates to: RILHFSSAQGQQKRESKNNLLIP*LRNGMS
Trigger: CGACATCCCATTTCGAAGCAAAGGAATGAGCAGATT...ATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAATGAAGAATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CAA 90 bp ATTCTGAGTTGTGTCACACAGGCTTTGACAATTAATGATGTACTAAAATGGGAAAAACTCTCTGAGTGCTaGCAGCAGCTCCTCCTTTCG +
Preference number: 5 (lower is better)
Translates to: ILSCVTQALTINDVLKWEKLSEC*QQLLLS
Trigger: CGAAAGGAGGAGCTGCTGCAAGCACTCAGAGAGTTT...TTCCCATTTTAGTACATCATTAATTGTCAAAGCCTGTGTGACACAACTCAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CAA 90 bp ACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATCTTCAAACAATATCTTaGCTCCAGCAGAAGCATCCT +
Preference number: 5 (lower is better)
Translates to: TINSPSNNIFAPAEASWDLQTIS*LQQKHP
Trigger: AGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAG...ATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CAA 90 bp GGACAGCCCCTGTTAGAGATAAACCGAGGCACTAGACAAGGAAGAAATGCATTAAATAAATTTGACTCCTaGTTCACTTCTCCAGCCTTT +
Preference number: 5 (lower is better)
Translates to: GQPLLEINRGTRQGRNALNKFDS*FTSPAF
Trigger: AAAGGCTGGAGAAGTGAACAAGGAGTCAAATTTATT...TAATGCATTTCTTCCTTGTCTAGTGCCTCGGTTTATCTCTAACAGGGGCTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CAA 90 bp TTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCTCCTAACAGGACCGATAAATAAATTTGACTCCTaGTTCACTTCTCCAGCCTTT +
Preference number: 5 (lower is better)
Translates to: FTSPAFGRTFSPLLTGPINKFDS*FTSPAF
Trigger: AAAGGCTGGAGAAGTGAACAAGGAGTCAAATTTATT...TATCGGTCCTGTTAGGAGGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CAA 90 bp AAGATAACATTACTCTCAGAAAGGGGTGAAGCTAAAAATCTTGCAGTTCTGGGGAGAGAAGTCCTCATATaGCAACCTGACCAGATGACT +
Preference number: 5 (lower is better)
Translates to: KITLLSERGEAKNLAVLGREVLI*QPDQMT
Trigger: AGTCATCTGGTCAGGTTGCAATATGAGGACTTCTCT...CCCCAGAACTGCAAGATTTTTAGCTTCACCCCTTTCTGAGAGTAATGTTATCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CAA 90 bp ACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGGGATAAAGGTGATGTCAATTaGTACTTAGCCCCAGCAATG +
Preference number: 5 (lower is better)
Translates to: TINSPSNNIFAPAEASWDKGDVN*YLAPAM
Trigger: CATTGCTGGGGCTAAGTACAAATTGACATCACCTTT...ATCCCAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR CAA 90 bp AGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGAGGAACTTAGCCAATTaGCCAAACTTCTCTAAGCCT +
Preference number: 5 (lower is better)
Translates to: RRGRVKIKAKASLVHKNERNLAN*PNFSKP
Trigger: AGGCTTAGAGAAGTTTGGCAAATTGGCTAAGTTCCT...CTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409014.5
ENST00000409949.5
CDS-3UTR CAA 90 bp ATTCTGAGTTGTGTCACACAGGCTTTGACAATTAATGATGTACTAAAATGGGAATTTCTGCTGTGGCTGTaGGGTCACAGGACTCGTTTT +
Preference number: 5 (lower is better)
Translates to: ILSCVTQALTINDVLKWEFLLWL*GHRTRF
Trigger: AAAACGAGTCCTGTGACCCAACAGCCACAGCAGAAA...TTCCCATTTTAGTACATCATTAATTGTCAAAGCCTGTGTGACACAACTCAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409949.5
CDS-3UTR CAA 90 bp AGAAGAGGGAGAGTAAAAATAAAGGCGAAGGCCTCTCTTGTCCACAAAAATGAGTATCCAATAACGTTCTaGGTAGTGTTTTTCCTCCAC +
Preference number: 5 (lower is better)
Translates to: RRGRVKIKAKASLVHKNEYPITF*VVFFLH
Trigger: GTGGAGGAAAAACACTACCAAGAACGTTATTGGATA...CTCATTTTTGTGGACAAGAGAGGCCTTCGCCTTTATTTTTACTCTCCCTCTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CAA 90 bp CAAAACCATAAACTCTCCTTCAAACAATATCTTTGCTCCAGCAGAAGCATCCTGCTTCAAACAATATCTTaGCTCCAGCAGAAGCATCCT +
Preference number: 5 (lower is better)
Translates to: QNHKLSFKQYLCSSRSILLQTIS*LQQKHP
Trigger: AGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAG...CAGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAGGAGAGTTTATGGTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CAA 90 bp AGAATTCTTCATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATCTTCAAACAATATCTTaGCTCCAGCAGAAGCATCCT +
Preference number: 5 (lower is better)
Translates to: RILHFSSAQGQQKRESKNLQTIS*LQQKHP
Trigger: AGGATGCTTCTGCTGGAGCAAAGATATTGTTTGAAG...ATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAATGAAGAATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CAA 90 bp GCTGTTTGGTCCTGGAAGTGTAAAGGAAAGCCTTTTCAAGTACGTGAAGTAGACAGTGGCTGGTACTATTaGTTTTCAAGGATTTCTAGT +
Preference number: 5 (lower is better)
Translates to: AVWSWKCKGKPFQVREVDSGWYY*FSRISS
Trigger: ACTAGAAATCCTTGAAAACAAATAGTACCAGCCACT...GTCTACTTCACGTACTTGAAAAGGCTTTCCTTTACACTTCCAGGACCAAACAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS-3UTR CAA 90 bp CCCCAGCAATGTGAATCCCCCTCTTCACAGTCCAATTCTAAGATTCCATTCTTAAACAGCCCTACTCCCTaGTTTCAAAGGAAAAATTTT +
Preference number: 5 (lower is better)
Translates to: PQQCESPSSQSNSKIPFLNSPTP*FQRKNF
Trigger: AAAATTTTTCCTTTGAAACAAGGGAGTAGGGCTGTT...TAAGAATGGAATCTTAGAATTGGACTGTGAAGAGGGGGATTCACATTGCTGGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS TCA 90 bp GCTGGCTTTGCCTTCCAAATTTACTACTATATGTTCACACTGTGCTaGATCCTTTATGGGGGTGATCTATTTGAATCCTTAGAAAAGCCA +
Preference number: 5 (lower is better)
Translates to: AGFAFQIYYYMFTLC*ILYGGDLFESLEKP
Trigger: TGGCTTTTCTAAGGATTCAAATAGATCACCCCCATAAAGGATTCAGCACAGTGTGAACATATAGTAGTAAATTTGGAAGGCAAAGCCAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409014.5
ENST00000413191.1
CDS-3UTR CAA 90 bp AGAATTCTTCATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATTATCCAATAACGTTCTaGGTAGTGTTTTTCCTCCAC +
Preference number: 5 (lower is better)
Translates to: RILHFSSAQGQQKRESKNYPITF*VVFFLH
Trigger: GTGGAGGAAAAACACTACCAAGAACGTTATTGGATA...ATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAATGAAGAATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CAA 90 bp ATTCTGAGTTGTGTCACACAGGCTTTGACAATTAATGATGTACTAAAATGGGAAAATCTGCTCATTCCTTaGCTTCGAAATGGGATGTCG +
Preference number: 5 (lower is better)
Translates to: ILSCVTQALTINDVLKWENLLIP*LRNGMS
Trigger: CGACATCCCATTTCGAAGCAAAGGAATGAGCAGATT...TTCCCATTTTAGTACATCATTAATTGTCAAAGCCTGTGTGACACAACTCAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CAA 90 bp ATAAATTTGACTCCTTGTTCACTTCTCCAGCCTTTGGAAGAACTTTTTCTCCCCAATAAATTTGACTCCTaGTTCACTTCTCCAGCCTTT +
Preference number: 5 (lower is better)
Translates to: INLTPCSLLQPLEELFLPNKFDS*FTSPAF
Trigger: AAAGGCTGGAGAAGTGAACAAGGAGTCAAATTTATT...GGGGAGAAAAAGTTCTTCCAAAGGCTGGAGAAGTGAACAAGGAGTCAAATTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CAA 90 bp AGAATTCTTCATTTTTCCTCTGCACAGGGACAGCAGAAGAGGGAGAGTAAAAATAATAAATTTGACTCCTaGTTCACTTCTCCAGCCTTT +
Preference number: 5 (lower is better)
Translates to: RILHFSSAQGQQKRESKNNKFDS*FTSPAF
Trigger: AAAGGCTGGAGAAGTGAACAAGGAGTCAAATTTATT...ATTTTTACTCTCCCTCTTCTGCTGTCCCTGTGCAGAGGAAAAATGAAGAATTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409675.5
CDS-3UTR CAA 90 bp ATTCTGAGTTGTGTCACACAGGCTTTGACAATTAATGATGTACTAAAATGGGAAAGGAACTTAGCCAATTaGCCAAACTTCTCTAAGCCT +
Preference number: 5 (lower is better)
Translates to: ILSCVTQALTINDVLKWERNLAN*PNFSKP
Trigger: AGGCTTAGAGAAGTTTGGCAAATTGGCTAAGTTCCT...TTCCCATTTTAGTACATCATTAATTGTCAAAGCCTGTGTGACACAACTCAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409014.5
ENST00000409949.5
CDS-3UTR CAA 90 bp ATTCTGAGTTGTGTCACACAGGCTTTGACAATTAATGATGTACTAAAATGGGAATATCCAATAACGTTCTaGGTAGTGTTTTTCCTCCAC +
Preference number: 5 (lower is better)
Translates to: ILSCVTQALTINDVLKWEYPITF*VVFFLH
Trigger: GTGGAGGAAAAACACTACCAAGAACGTTATTGGATA...TTCCCATTTTAGTACATCATTAATTGTCAAAGCCTGTGTGACACAACTCAGAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
CDS-3UTR CAA 90 bp ATTCTGAGTTGTGTCACACAGGCTTTGACAATTAATGATGTACTAAAATGGGAAGATTTAAGACGACAATaGTCAGTCTTAGGAAAAGCC +
Preference number: 5 (lower is better)
Translates to: ILSCVTQALTINDVLKWEDLRRQ*SVLGKA
Trigger: GGCTTTTCCTAAGACTGACAATTGTCGTCTTAAATC...TTCCCATTTTAGTACATCATTAATTGTCAAAGCCTGTGTGACACAACTCAGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312994.9
CDS GCA 72 bp TCCGCGTTGAGCAGGGCCCTGGCCCCAGAACGCACCTaGCGGCGCTCAGGATCTTCCAGCAGGCGCAAGCCC +
Preference number: 6 (lower is better)
Translates to: SALSRALAPERT*RRSGSSSRRKP
Trigger: GGGCTTGCGCCTGCTGGAAGATCCTGAGCGCCGGCAGGTGCGTTCTGGGGCCAGGGCCCTGCTCAACGCGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
ENST00000492815.5
CDS TCA 72 bp GGCAGGTGCTTGGGCTGCATGGAGTCCAGGAAGTGCTaGCGCCAGCGGCTCTCCAGCTGCATGAGGGAGCGC +
Preference number: 6 (lower is better)
Translates to: GRCLGCMESRKC*RQRLSSCMRER
Trigger: GCGCTCCCTCATGCAGCTGGAGAGCCGCTGGCGTCAGCACTTCCTGGACTCCATGCAGCCCAAGCACCTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
ENST00000492815.5
CDS CCA 72 bp CCAGGTGCCGCGGGCGGGGCCTCCTTTTTAGCTGACTaGGACACGCAGCCTCGAAGGTCTGGTAGAGTCTCC +
Preference number: 6 (lower is better)
Translates to: PGAAGGASFLAD*DTQPRRSGRVS
Trigger: GGAGACTCTACCAGACCTTCGAGGCTGCGTGTCCCAGTCAGCTAAAAAGGAGGCCCCGCCCGCGGCACCTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312994.9
ENST00000409242.5
ENST00000409949.5
ENST00000413191.1
ENST00000461908.5
CDS CAA 90 bp AAGGACAGTCTCCTCATACGAATCCAGGAGAGAAAACAGCAGCTGTaGCCGCGTCGAACCCGCAGCGCCCGAGGAGCTACCAGGTGCCGC +
Preference number: 6 (lower is better)
Translates to: KDSLLIRIQERKQQL*PRRTRSARGATRCR
Trigger: GCGGCACCTGGTAGCTCCTCGGGCGCTGCGGGTTCGACGCGGCAACAGCTGCTGTTTTCTCTCCTGGATTCGTATGAGGAGACTGTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409949.5
ENST00000413191.1
ENST00000461908.5
CDS TCA 72 bp AACTCTCTGAGTGCTTGCAGCAGCTCCTCCTTTCGCTaGGTAGGCAGGCTCTCCGCGTTGAGCAGGGCCCTG +
Preference number: 6 (lower is better)
Translates to: NSLSACSSSSFR*VGRLSALSRAL
Trigger: CAGGGCCCTGCTCAACGCGGAGAGCCTGCCTACTCAGCGAAAGGAGGAGCTGCTGCAAGCACTCAGAGAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
ENST00000492815.5
CDS GCA 72 bp TCCCACAATCTGCTGTCTCGGACTGGGCCGCACACCTaGAGCGGGCTCACGTTAAAGACCTGGAACCTGTGC +
Preference number: 6 (lower is better)
Translates to: SHNLLSRTGPHT*SGLTLKTWNLC
Trigger: GCACAGGTTCCAGGTCTTTAACGTGAGCCCGCTGCAGGTGTGCGGCCCAGTCCGAGACAGCAGATTGTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409018.7
CDS GCA 72 bp TCTCCTCATCTGCTGTCTCGGACTGGGCCGCACACCTaGAGCGGGCTCACGTTAAAGACCTGGAACCTGTGC +
Preference number: 6 (lower is better)
Translates to: SPHLLSRTGPHT*SGLTLKTWNLC
Trigger: GCACAGGTTCCAGGTCTTTAACGTGAGCCCGCTGCAGGTGTGCGGCCCAGTCCGAGACAGCAGATGAGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492815.5
CDS CAA 72 bp CCCACAATACGAATCCAGGAGAGAAAACAGCAGCTGTaGCCGCGTCGAACCCGCAGCGCCCGAGGAGCTACC +
Preference number: 6 (lower is better)
Translates to: PTIRIQERKQQL*PRRTRSARGAT
Trigger: GGTAGCTCCTCGGGCGCTGCGGGTTCGACGCGGCAACAGCTGCTGTTTTCTCTCCTGGATTCGTATTGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312994.9
ENST00000409242.5
CDS CAA 72 bp CTCCTCATACGAATCCAGGAGAGAAAACAGCAGCTGTaGCCGCGTCGAACCCGCAGCGCCCGAGGAGCTACC +
Preference number: 6 (lower is better)
Translates to: LLIRIQERKQQL*PRRTRSARGAT
Trigger: GGTAGCTCCTCGGGCGCTGCGGGTTCGACGCGGCAACAGCTGCTGTTTTCTCTCCTGGATTCGTATGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409949.5
ENST00000413191.1
ENST00000461908.5
CDS GCA 72 bp CCACAATACGAATCCAGGAGAGAAAACAGCAGCTGTTaGCGCGTCGAACCCGCAGCGCCCGAGGAGCTACCA +
Preference number: 6 (lower is better)
Translates to: PQYESRRENSSC*RVEPAAPEELP
Trigger: TGGTAGCTCCTCGGGCGCTGCGGGTTCGACGCGGCAACAGCTGCTGTTTTCTCTCCTGGATTCGTATTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312994.9
ENST00000409242.5
CDS GCA 72 bp TCCTCATACGAATCCAGGAGAGAAAACAGCAGCTGTTaGCGCGTCGAACCCGCAGCGCCCGAGGAGCTACCA +
Preference number: 6 (lower is better)
Translates to: SSYESRRENSSC*RVEPAAPEELP
Trigger: TGGTAGCTCCTCGGGCGCTGCGGGTTCGACGCGGCAACAGCTGCTGTTTTCTCTCCTGGATTCGTATGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409949.5
ENST00000413191.1
ENST00000461908.5
CDS CAA 72 bp TGGCAGGAGGTGCAGAGCAGCAGCACATCGTGGGAGTaGTGGTCCTTCATCTCGATGGGGAAGTGCTTCCGG +
Preference number: 6 (lower is better)
Translates to: WQEVQSSSTSWE*WSFISMGKCFR
Trigger: CCGGAAGCACTTCCCCATCGAGATGAAGGACCACAACTCCCACGATGTGCTGCTGCTCTGCACCTCCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
ENST00000492815.5
CDS TCA 72 bp GAATTTCCGGAGCAGCTTCTGATGGTTGTGGTCCACTaGCCACTGCTGGGGCAGGTGCTTGGGCTGCATGGA +
Preference number: 6 (lower is better)
Translates to: EFPEQLLMVVVH*PLLGQVLGLHG
Trigger: TCCATGCAGCCCAAGCACCTGCCCCAGCAGTGGTCAGTGGACCACAACCATCAGAAGCTGCTCCGGAAATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
ENST00000492815.5
CDS CCA 72 bp AGCTCTCTACTGCCCAGCACTTTCTGCTGTGGCTGTTaGGTCACAGGACTCGTTTTACTCCTTCGGCGGCGC +
Preference number: 6 (lower is better)
Translates to: SSLLPSTFCCGC*VTGLVLLLRRR
Trigger: GCGCCGCCGAAGGAGTAAAACGAGTCCTGTGACCCAACAGCCACAGCAGAAAGTGCTGGGCAGTAGAGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409949.5
ENST00000413191.1
ENST00000492815.5
CDS CCA 72 bp CAGGAGGTGCAGAGCAGCAGCACATCGTGGGAGTTGTaGTCCTTCATCTCGATGGGGAAGTGCTTCCGGTAC +
Preference number: 6 (lower is better)
Translates to: QEVQSSSTSWEL*SFISMGKCFRY
Trigger: GTACCGGAAGCACTTCCCCATCGAGATGAAGGACCACAACTCCCACGATGTGCTGCTGCTCTGCACCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
ENST00000492815.5
CDS GCA 72 bp TCTGGAGGGGGCAGCTCTCTACTGCCCAGCACTTTCTaGTGTGGCTGTTGGGTCACAGGACTCGTTTTACTC +
Preference number: 6 (lower is better)
Translates to: SGGGSSLLPSTF*CGCWVTGLVLL
Trigger: GAGTAAAACGAGTCCTGTGACCCAACAGCCACAGCAGAAAGTGCTGGGCAGTAGAGAGCTGCCCCCTCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409949.5
ENST00000413191.1
ENST00000492815.5
CDS CAA 72 bp TTAGCTTGGGCAGGCGAACCAAGACACACAGGCCACTaGGGGAGGCCATTTGTAGAAGTGACAGAGGGCTGG +
Preference number: 6 (lower is better)
Translates to: LAWAGEPRHTGH*GRPFVEVTEGW
Trigger: CCAGCCCTCTGTCACTTCTACAAATGGCCTCCCCAAGTGGCCTGTGTGTCTTGGTTCGCCTGCCCAAGCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
ENST00000413191.1
ENST00000489133.6
ENST00000492815.5
ENST00000494629.1
CDS CAA 90 bp CTCCACAGATTAGCTTGGGCAGGCGAACCAAGACACACAGGCCACTaGGGGAGGCCATTTGTAGAAGTGACAGAGGGCTGGCTTTGCCTT +
Preference number: 6 (lower is better)
Translates to: LHRLAWAGEPRHTGH*GRPFVEVTEGWLCL
Trigger: AAGGCAAAGCCAGCCCTCTGTCACTTCTACAAATGGCCTCCCCAAGTGGCCTGTGTGTCTTGGTTCGCCTGCCCAAGCTAATCTGTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
ENST00000413191.1
ENST00000489133.6
ENST00000492815.5
ENST00000494629.1
CDS GCA 72 bp ATCCCACTCTGCCTCCTGAGACACCGTCACCACCTTTaGTTTAAGGATCCGTTCCTTCCACGAGGATCTGGG +
Preference number: 6 (lower is better)
Translates to: IPLCLLRHRHHL*FKDPFLPRGSG
Trigger: CCCAGATCCTCGTGGAAGGAACGGATCCTTAAAGCAAAGGTGGTGACGGTGTCTCAGGAGGCAGAGTGGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409949.5
ENST00000413191.1
ENST00000492815.5
CDS GCA 72 bp GGGAGGCCATTTGTAGAAGTGACAGAGGGCTGGCTTTaGCTTCCAAATTTACCTGCTGTCTCGGACTGGGCC +
Preference number: 6 (lower is better)
Translates to: GRPFVEVTEGWL*LPNLPAVSDWA
Trigger: GGCCCAGTCCGAGACAGCAGGTAAATTTGGAAGGCAAAGCCAGCCCTCTGTCACTTCTACAAATGGCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409675.5
CDS CAA 72 bp GGGGAGGCCATTTGTAGAAGTGACAGAGGGCTGGCTTaGCCTTCCAAATTTACCTGCTGTCTCGGACTGGGC +
Preference number: 6 (lower is better)
Translates to: GEAICRSDRGLA*PSKFTCCLGLG
Trigger: GCCCAGTCCGAGACAGCAGGTAAATTTGGAAGGCAAAGCCAGCCCTCTGTCACTTCTACAAATGGCCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409675.5
CDS TCA 72 bp GAAGGTGCGGCAGTGAGGGAGTGGAGGAAACAGGTTTaGCTCAACACTTTCTGTTGCTCCAGAAGGCTCAGC +
Preference number: 6 (lower is better)
Translates to: EGAAVREWRKQV*LNTFCCSRRLS
Trigger: GCTGAGCCTTCTGGAGCAACAGAAAGTGTTGAGTCAAACCTGTTTCCTCCACTCCCTCACTGCCGCACCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461908.5
ENST00000487724.5
CDS CCA 72 bp GCAGCACATCGTGGGAGTTGTGGTCCTTCATCTCGATaGGGAAGTGCTTCCGGTACTCATGTGGAATCACGT +
Preference number: 6 (lower is better)
Translates to: AAHRGSCGPSSR*GSASGTHVESR
Trigger: ACGTGATTCCACATGAGTACCGGAAGCACTTCCCCATCGAGATGAAGGACCACAACTCCCACGATGTGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
ENST00000492815.5
CDS CAA 72 bp GGAAGGTGCGGCAGTGAGGGAGTGGAGGAAACAGGTTaGACTCAACACTTTCTGTTGCTCCAGAAGGCTCAG +
Preference number: 6 (lower is better)
Translates to: GRCGSEGVEETG*TQHFLLLQKAQ
Trigger: CTGAGCCTTCTGGAGCAACAGAAAGTGTTGAGTCAAACCTGTTTCCTCCACTCCCTCACTGCCGCACCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461908.5
ENST00000487724.5
CDS CAA 90 bp CATCTCCTCTGTGACCACGTCTGTGTTATAAAACTCTCTGAGTGCTaGCAGCAGCTCCTCCTTTCGCTGAGTAGGCAGGCTCTCCGCGTT +
Preference number: 6 (lower is better)
Translates to: HLLCDHVCVIKLSEC*QQLLLSLSRQALRV
Trigger: AACGCGGAGAGCCTGCCTACTCAGCGAAAGGAGGAGCTGCTGCAAGCACTCAGAGAGTTTTATAACACAGACGTGGTCACAGAGGAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
ENST00000492815.5
CDS GCA 72 bp TCGTGGGAGTTGTGGTCCTTCATCTCGATGGGGAAGTaGTTCCGGTACTCATGTGGAATCACGTTCTTCCGA +
Preference number: 6 (lower is better)
Translates to: SWELWSFISMGK*FRYSCGITFFR
Trigger: TCGGAAGAACGTGATTCCACATGAGTACCGGAAGCACTTCCCCATCGAGATGAAGGACCACAACTCCCACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
ENST00000492815.5
CDS CCA 72 bp TGTCCTAACTGGGAGGAAAGCAGCTATCAAGACAGCTaGATGGGAAGATCTTCCCCGAATTTCCGGAGCAGC +
Preference number: 6 (lower is better)
Translates to: CPNWEESSYQDS*MGRSSPNFRSS
Trigger: GCTGCTCCGGAAATTCGGGGAAGATCTTCCCATCCAGCTGTCTTGATAGCTGCTTTCCTCCCAGTTAGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
ENST00000492815.5
CDS CCA 72 bp CTTCAACCTTGGCTCCAGCTTCCCACTTGTCCTAACTaGGAGGAAAGCAGCTATCAAGACAGCTGGATGGGA +
Preference number: 6 (lower is better)
Translates to: LQPWLQLPTCPN*EESSYQDSWMG
Trigger: TCCCATCCAGCTGTCTTGATAGCTGCTTTCCTCCCAGTTAGGACAAGTGGGAAGCTGGAGCCAAGGTTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
ENST00000492815.5
CDS CAA 90 bp TACTTCTCTGGAAGGTGCGGCAGTGAGGGAGTGGAGGAAACAGGTTaGACTCAACACTTTCTGTTGCTCCAGAAGGCTCAGCAGTTCTCC +
Preference number: 6 (lower is better)
Translates to: YFSGRCGSEGVEETG*TQHFLLLQKAQQFS
Trigger: GGAGAACTGCTGAGCCTTCTGGAGCAACAGAAAGTGTTGAGTCAAACCTGTTTCCTCCACTCCCTCACTGCCGCACCTTCCAGAGAAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000461908.5
ENST00000487724.5
CDS CAA 90 bp GTGAGAGTCTCAGCATCCCAGTTGCTGCAACGAAGTAGAAGGGACTaGTCAAGGGGAAAGTTCAAAACAGTCTCAGCGAGGGACTTCAGG +
Preference number: 6 (lower is better)
Translates to: VRVSASQLLQRSRRD*SRGKFKTVSARDFR
Trigger: CCTGAAGTCCCTCGCTGAGACTGTTTTGAACTTTCCCCTTGACAAGTCCCTTCTACTTCGTTGCAGCAACTGGGATGCTGAGACTCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
ENST00000413191.1
ENST00000492815.5
ENST00000494629.1
CDS GCA 72 bp CTCTGTGACCACGTCTGTGTTATAAAACTCTCTGAGTaGTTGCAGCAGCTCCTCCTTTCGCTGAGTAGGCAG +
Preference number: 6 (lower is better)
Translates to: LCDHVCVIKLSE*LQQLLLSLSRQ
Trigger: CTGCCTACTCAGCGAAAGGAGGAGCTGCTGCAAGCACTCAGAGAGTTTTATAACACAGACGTGGTCACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
ENST00000492815.5
CDS CAA 72 bp ATTACCTGGTCCTCTGTGAGAGTCTCAGCATCCCAGTaGCTGCAACGAAGTAGAAGGGACTTGTCAAGGGGA +
Preference number: 6 (lower is better)
Translates to: ITWSSVRVSASQ*LQRSRRDLSRG
Trigger: TCCCCTTGACAAGTCCCTTCTACTTCGTTGCAGCAACTGGGATGCTGAGACTCTCACAGAGGACCAGGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
ENST00000494629.1
CDS CAA 72 bp TGTGACCACGTCTGTGTTATAAAACTCTCTGAGTGCTaGCAGCAGCTCCTCCTTTCGCTGAGTAGGCAGGCT +
Preference number: 6 (lower is better)
Translates to: CDHVCVIKLSEC*QQLLLSLSRQA
Trigger: AGCCTGCCTACTCAGCGAAAGGAGGAGCTGCTGCAAGCACTCAGAGAGTTTTATAACACAGACGTGGTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
ENST00000492815.5
CDS CAA 72 bp AATTCCTGGTCCTCTGTGAGAGTCTCAGCATCCCAGTaGCTGCAACGAAGTAGAAGGGACTTGTCAAGGGGA +
Preference number: 6 (lower is better)
Translates to: NSWSSVRVSASQ*LQRSRRDLSRG
Trigger: TCCCCTTGACAAGTCCCTTCTACTTCGTTGCAGCAACTGGGATGCTGAGACTCTCACAGAGGACCAGGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492815.5
CDS CAA 90 bp CTCCAGGTGAATTCCTGGTCCTCTGTGAGAGTCTCAGCATCCCAGTaGCTGCAACGAAGTAGAAGGGACTTGTCAAGGGGAAAGTTCAAA +
Preference number: 6 (lower is better)
Translates to: LQVNSWSSVRVSASQ*LQRSRRDLSRGKFK
Trigger: TTTGAACTTTCCCCTTGACAAGTCCCTTCTACTTCGTTGCAGCAACTGGGATGCTGAGACTCTCACAGAGGACCAGGAATTCACCTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492815.5
CDS CAA 72 bp TCCCCATTAACCTCTTCTCCCAATCTGCTCATTCCTTaGCTTCGAAATGGGATGTCGACCACACCCTGGCAT +
Preference number: 6 (lower is better)
Translates to: SPLTSSPNLLIP*LRNGMSTTPWH
Trigger: ATGCCAGGGTGTGGTCGACATCCCATTTCGAAGCAAAGGAATGAGCAGATTGGGAGAAGAGGTTAATGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
ENST00000492815.5
CDS CCA 72 bp CTCTTCTCCCAATCTGCTCATTCCTTTGCTTCGAAATaGGATGTCGACCACACCCTGGCATTTTTCCAAGAC +
Preference number: 6 (lower is better)
Translates to: LFSQSAHSFASK*DVDHTLAFFQD
Trigger: GTCTTGGAAAAATGCCAGGGTGTGGTCGACATCCCATTTCGAAGCAAAGGAATGAGCAGATTGGGAGAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
ENST00000492815.5
CDS CCA 72 bp CTTCATCTCGATGGGGAAGTGCTTCCGGTACTCATGTaGAATCACGTTCTTCCGAATGTAGGAGTCTCTCTT +
Preference number: 6 (lower is better)
Translates to: LHLDGEVLPVLM*NHVLPNVGVSL
Trigger: AAGAGAGACTCCTACATTCGGAAGAACGTGATTCCACATGAGTACCGGAAGCACTTCCCCATCGAGATGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
ENST00000492815.5
CDS CAA 90 bp TCTGTTGCTTCCCCATTAACCTCTTCTCCCAATCTGCTCATTCCTTaGCTTCGAAATGGGATGTCGACCACACCCTGGCATTTTTCCAAG +
Preference number: 6 (lower is better)
Translates to: SVASPLTSSPNLLIP*LRNGMSTTPWHFSK
Trigger: CTTGGAAAAATGCCAGGGTGTGGTCGACATCCCATTTCGAAGCAAAGGAATGAGCAGATTGGGAGAAGAGGTTAATGGGGAAGCAACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
ENST00000492815.5
CDS CAA 90 bp AGGCCACTTGGGGAGGCCATTTGTAGAAGTGACAGAGGGCTGGCTTaGCCTTCCAAATTTACTACTATATGTTCACACTGTGCTGAATCC +
Preference number: 6 (lower is better)
Translates to: RPLGEAICRSDRGLA*PSKFTTICSHCAES
Trigger: GGATTCAGCACAGTGTGAACATATAGTAGTAAATTTGGAAGGCAAAGCCAGCCCTCTGTCACTTCTACAAATGGCCTCCCCAAGTGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409014.5
ENST00000413191.1
CDS CCA 72 bp ATTCCTTTGCTTCGAAATGGGATGTCGACCACACCCTaGCATTTTTCCAAGACTTTTCTCCAGCTACTGTGG +
Preference number: 6 (lower is better)
Translates to: IPLLRNGMSTTP*HFSKTFLQLLW
Trigger: CCACAGTAGCTGGAGAAAAGTCTTGGAAAAATGCCAGGGTGTGGTCGACATCCCATTTCGAAGCAAAGGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
ENST00000492815.5
CDS CCA 72 bp TTTATGTTTTCTGGGGTCTCTCCCTTGGTGGTTGCCTaGCACCATCCCATCCATCTTAGACTTCTTATTTCT +
Preference number: 6 (lower is better)
Translates to: FMFSGVSPLVVA*HHPIHLRLLIS
Trigger: AGAAATAAGAAGTCTAAGATGGATGGGATGGTGCCAGGCAACCACCAAGGGAGAGACCCCAGAAAACATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
ENST00000492815.5
CDS GCA 72 bp AGACTTCTTATTTCTTGGCTTCTGCTGAGATTCTGTTaGTTCCCCATTAACCTCTTCTCCCAATCTGCTCAT +
Preference number: 6 (lower is better)
Translates to: RLLISWLLLRFC*FPINLFSQSAH
Trigger: ATGAGCAGATTGGGAGAAGAGGTTAATGGGGAAGCAACAGAATCTCAGCAGAAGCCAAGAAATAAGAAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
ENST00000492815.5
CDS CCA 72 bp TGGCATCTTCTGAGCATCCCACTCCAACTTTCAAAATaGTGCCATCTGCCAAAATATCCAATAACGTTCTTG +
Preference number: 6 (lower is better)
Translates to: WHLLSIPLQLSK*CHLPKYPITFL
Trigger: CAAGAACGTTATTGGATATTTTGGCAGATGGCACCATTTTGAAAGTTGGAGTGGGATGCTCAGAAGATGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000312994.9
ENST00000409014.5
ENST00000409018.7
ENST00000409242.5
ENST00000409675.5
ENST00000409949.5
ENST00000413191.1
ENST00000489133.6
ENST00000492815.5
ENST00000494629.1