Pregenerated sensors for EWSR1 (Homo sapiens)
Ensembl gene IDs: ENSG00000182944Ensembl transcript IDs: ENST00000331029.11, ENST00000332050.10, ENST00000333395.10, ENST00000360091.3, ENST00000397938.7, ENST00000444626.5, ENST00000469669.5, ENST00000479135.5, ENST00000483415.5, ENST00000485037.5, ENST00000493426.1, ENST00000610553.1, ENST00000629659.2
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAAAACATCACAACCATGAACATTGTTACAGTTAAGAGGCCCTCTTaGTTCTCCACAATGATACTGAGCATGCTCACAAGGGGTTCCCAT | + |
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Preference number: 1 (lower is better) Translates to: KNITTMNIVTVKRPS*FSTMILSMLTRGSH Trigger: ATGGGAACCCCTTGTGAGCATGCTCAGTATCATTGTGGAGAACCAAGAGGGCCTCTTAACTGTAACAATGTTCATGGTTGTGATGTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000331029.11 ENST00000332050.10 ENST00000360091.3 ENST00000397938.7 ENST00000629659.2 |
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| 3UTR CCA 72 bp | ACAACCATGAACATTGTTACAGTTAAGAGGCCCTCTTaGTTCTCCACAATGATACTGAGCATGCTCACAAGG | + |
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Preference number: 3 (lower is better) Translates to: TTMNIVTVKRPS*FSTMILSMLTR Trigger: CCTTGTGAGCATGCTCAGTATCATTGTGGAGAACCAAGAGGGCCTCTTAACTGTAACAATGTTCATGGTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000331029.11 ENST00000332050.10 ENST00000360091.3 ENST00000397938.7 ENST00000629659.2 |
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| 3UTR GCA 72 bp | TTATACCTCCTCTGGTTCATTACCAAACAACAAGTATaGAGTTACCAAAGTTACAGAAGGATTCCATTTATA | + |
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Preference number: 3 (lower is better) Translates to: LYLLWFITKQQV*SYQSYRRIPFI Trigger: TATAAATGGAATCCTTCTGTAACTTTGGTAACTGCATACTTGTTGTTTGGTAATGAACCAGAGGAGGTATAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000333395.10 |
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| CDS-3UTR GCA 90 bp | AAGAGGCCCTCTTGGTTCTCCACAATGATACTGAGCATGCTCACAAGGGGTTCCGTGGTGGCATGCCTCTaGCCTCACGGGGTGGCAGAC | + |
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Preference number: 4 (lower is better) Translates to: KRPSWFSTMILSMLTRGSVVACL*PHGVAD Trigger: GTCTGCCACCCCGTGAGGGCAGAGGCATGCCACCAC...GGAACCCCTTGTGAGCATGCTCAGTATCATTGTGGAGAACCAAGAGGGCCTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000331029.11 ENST00000332050.10 ENST00000360091.3 ENST00000397938.7 ENST00000629659.2 |
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| CDS-3UTR TCA 90 bp | ACAGTTAAGAGGCCCTCTTGGTTCTCCACAATGATACTGAGCATGCTCACAAGGGGGCCAGAGCGGGGGTaGGCGGGTCTCAGCGTGAAA | + |
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Preference number: 4 (lower is better) Translates to: TVKRPSWFSTMILSMLTRGPERG*AGLSVK Trigger: TTTCACGCTGAGACCCGCTCACCCCCGCTCTGGCCC...CCTTGTGAGCATGCTCAGTATCATTGTGGAGAACCAAGAGGGCCTCTTAACTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000332050.10 ENST00000629659.2 |
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| CDS-3UTR GCA 90 bp | AAGAGGCCCTCTTGGTTCTCCACAATGATACTGAGCATGCTCACAAGGGGTTCCAGTAGGGCCGATCTCTaGGCTCCTGACGGTGCTCGC | + |
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Preference number: 4 (lower is better) Translates to: KRPSWFSTMILSMLTRGSSRADL*APDGAR Trigger: GCGAGCACCGTCAGGAGCGCAGAGATCGGCCCTACT...GGAACCCCTTGTGAGCATGCTCAGTATCATTGTGGAGAACCAAGAGGGCCTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000331029.11 ENST00000332050.10 ENST00000360091.3 ENST00000397938.7 ENST00000629659.2 |
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| CDS-3UTR GCA 90 bp | ACAGTTAAGAGGCCCTCTTGGTTCTCCACAATGATACTGAGCATGCTCACAAGGGTGGTGGCATGCCTCTaGCCTCACGGGGTGGCAGAC | + |
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Preference number: 4 (lower is better) Translates to: TVKRPSWFSTMILSMLTRVVACL*PHGVAD Trigger: GTCTGCCACCCCGTGAGGGCAGAGGCATGCCACCAC...CCTTGTGAGCATGCTCAGTATCATTGTGGAGAACCAAGAGGGCCTCTTAACTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000331029.11 ENST00000332050.10 ENST00000360091.3 ENST00000397938.7 ENST00000629659.2 |
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| CDS-3UTR CCA 90 bp | ACAGTTAAGAGGCCCTCTTGGTTCTCCACAATGATACTGAGCATGCTCACAAGGACCTCCTGGGCCTCCTaGACCTCCACGGAGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: TVKRPSWFSTMILSMLTRTSWAS*TSTEWW Trigger: CCACCACTCCGTGGAGGTCCAGGAGGCCCAGGAGGT...CCTTGTGAGCATGCTCAGTATCATTGTGGAGAACCAAGAGGGCCTCTTAACTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000331029.11 ENST00000332050.10 ENST00000360091.3 ENST00000397938.7 ENST00000629659.2 |
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| CDS-3UTR TCA 90 bp | ACAGTTAAGAGGCCCTCTTGGTTCTCCACAATGATACTGAGCATGCTCACAAGGGAGCGGGTCTCAGCGTaGAACCGGAGAGGCTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: TVKRPSWFSTMILSMLTRERVSA*NRRGSQ Trigger: CTGAGAGCCTCTCCGGTTTCACGCTGAGACCCGCTC...CCTTGTGAGCATGCTCAGTATCATTGTGGAGAACCAAGAGGGCCTCTTAACTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000332050.10 ENST00000629659.2 |
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| CDS-3UTR TCA 90 bp | AAGAGGCCCTCTTGGTTCTCCACAATGATACTGAGCATGCTCACAAGGGGTTCCGTGGTCCTGTCGGAATaGACTCTGCTGCCCGTAGCT | + |
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Preference number: 4 (lower is better) Translates to: KRPSWFSTMILSMLTRGSVVLSE*TLLPVA Trigger: AGCTACGGGCAGCAGAGTTCATTCCGACAGGACCAC...GGAACCCCTTGTGAGCATGCTCAGTATCATTGTGGAGAACCAAGAGGGCCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000331029.11 ENST00000397938.7 |
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| CDS-3UTR CCA 90 bp | ACAGTTAAGAGGCCCTCTTGGTTCTCCACAATGATACTGAGCATGCTCACAAGGTCTGCCCTCACGGGGTaGCAGACCACCCCGCATACT | + |
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Preference number: 4 (lower is better) Translates to: TVKRPSWFSTMILSMLTRSALTG*QTTPHT Trigger: AGTATGCGGGGTGGTCTGCCACCCCGTGAGGGCAGA...CCTTGTGAGCATGCTCAGTATCATTGTGGAGAACCAAGAGGGCCTCTTAACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000331029.11 ENST00000332050.10 ENST00000360091.3 ENST00000397938.7 ENST00000629659.2 |
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| CDS-3UTR CCA 90 bp | ACAGTTAAGAGGCCCTCTTGGTTCTCCACAATGATACTGAGCATGCTCACAAGGTGGACCTCCACGGAGTaGTGGTGGCATGCCTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: TVKRPSWFSTMILSMLTRWTSTE*WWHASA Trigger: GGCAGAGGCATGCCACCACCACTCCGTGGAGGTCCA...CCTTGTGAGCATGCTCAGTATCATTGTGGAGAACCAAGAGGGCCTCTTAACTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000331029.11 ENST00000332050.10 ENST00000360091.3 ENST00000397938.7 ENST00000629659.2 |
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| CDS-3UTR TCA 90 bp | ACAACCATGAACATTGTTACAGTTAAGAGGCCCTCTTGGTTCTCCACAATGATAGGGCCAGAGCGGGGGTaGGCGGGTCTCAGCGTGAAA | + |
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Preference number: 4 (lower is better) Translates to: TTMNIVTVKRPSWFSTMIGPERG*AGLSVK Trigger: TTTCACGCTGAGACCCGCTCACCCCCGCTCTGGCCC...TATCATTGTGGAGAACCAAGAGGGCCTCTTAACTGTAACAATGTTCATGGTTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000332050.10 ENST00000629659.2 |
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| CDS-3UTR TCA 90 bp | ACAGTTAAGAGGCCCTCTTGGTTCTCCACAATGATACTGAGCATGCTCACAAGGAAAGAGCGCCCGACGTaGCACTCGGGCCAAAATAGC | + |
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Preference number: 4 (lower is better) Translates to: TVKRPSWFSTMILSMLTRKERPT*HSGQNS Trigger: GCTATTTTGGCCCGAGTGTCACGTCGGGCGCTCTTT...CCTTGTGAGCATGCTCAGTATCATTGTGGAGAACCAAGAGGGCCTCTTAACTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000332050.10 ENST00000629659.2 |
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| CDS-3UTR CCA 90 bp | AAGAGGCCCTCTTGGTTCTCCACAATGATACTGAGCATGCTCACAAGGGGTTCCAGCCTTGGCAGTGGGTaGGTCTTCATAGGACACTGT | + |
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Preference number: 4 (lower is better) Translates to: KRPSWFSTMILSMLTRGSSLGSG*VFIGHC Trigger: ACAGTGTCCTATGAAGACCCACCCACTGCCAAGGCT...GGAACCCCTTGTGAGCATGCTCAGTATCATTGTGGAGAACCAAGAGGGCCTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000331029.11 ENST00000332050.10 ENST00000360091.3 ENST00000397938.7 ENST00000629659.2 |
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| CDS-3UTR CCA 90 bp | AAGAGGCCCTCTTGGTTCTCCACAATGATACTGAGCATGCTCACAAGGGGTTCCCCACGATCACCACACTaGTTGCACTCTGTTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KRPSWFSTMILSMLTRGSPRSPH*LHSVLQ Trigger: CTGGAGAACAGAGTGCAACCAGTGTGGTGATCGTGG...GGAACCCCTTGTGAGCATGCTCAGTATCATTGTGGAGAACCAAGAGGGCCTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360091.3 |
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| CDS-3UTR CCA 90 bp | ACAGTTAAGAGGCCCTCTTGGTTCTCCACAATGATACTGAGCATGCTCACAAGGCTGGTCCTTCATCCATaGGTCTCTGCTGCCCGTAGC | + |
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Preference number: 4 (lower is better) Translates to: TVKRPSWFSTMILSMLTRLVLHP*VSAARS Trigger: GCTACGGGCAGCAGAGACCCATGGATGAAGGACCAG...CCTTGTGAGCATGCTCAGTATCATTGTGGAGAACCAAGAGGGCCTCTTAACTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629659.2 |
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| CDS-3UTR GCA 90 bp | ACAACCATGAACATTGTTACAGTTAAGAGGCCCTCTTGGTTCTCCACAATGATAGTGGTGGCATGCCTCTaGCCTCACGGGGTGGCAGAC | + |
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Preference number: 4 (lower is better) Translates to: TTMNIVTVKRPSWFSTMIVVACL*PHGVAD Trigger: GTCTGCCACCCCGTGAGGGCAGAGGCATGCCACCAC...TATCATTGTGGAGAACCAAGAGGGCCTCTTAACTGTAACAATGTTCATGGTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000331029.11 ENST00000332050.10 ENST00000360091.3 ENST00000397938.7 ENST00000629659.2 |
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| CDS-3UTR GCA 90 bp | ACAACCATGAACATTGTTACAGTTAAGAGGCCCTCTTGGTTCTCCACAATGATACTCGCTCTCCAGCGCTaGCCATTCCACCGCGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: TTMNIVTVKRPSWFSTMILALQR*PFHRVL Trigger: GAGGACGCGGTGGAATGGGCAGCGCTGGAGAGCGAG...TATCATTGTGGAGAACCAAGAGGGCCTCTTAACTGTAACAATGTTCATGGTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397938.7 |
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| CDS-3UTR CCA 90 bp | ACAACCATGAACATTGTTACAGTTAAGAGGCCCTCTTGGTTCTCCACAATGATAACCTCCTGGGCCTCCTaGACCTCCACGGAGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TTMNIVTVKRPSWFSTMITSWAS*TSTEWW Trigger: CCACCACTCCGTGGAGGTCCAGGAGGCCCAGGAGGT...TATCATTGTGGAGAACCAAGAGGGCCTCTTAACTGTAACAATGTTCATGGTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000331029.11 ENST00000332050.10 ENST00000360091.3 ENST00000397938.7 ENST00000629659.2 |
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| CDS-3UTR CCA 90 bp | AAGAGGCCCTCTTGGTTCTCCACAATGATACTGAGCATGCTCACAAGGGGTTCCGTCAGAGTCTTCATCTaGATCTCTGCTCATGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: KRPSWFSTMILSMLTRGSVRVFI*ISAHAS Trigger: GGAGGCATGAGCAGAGATCCAGATGAAGACTCTGAC...GGAACCCCTTGTGAGCATGCTCAGTATCATTGTGGAGAACCAAGAGGGCCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331029.11 |
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| CDS-3UTR TCA 90 bp | ACAGTTAAGAGGCCCTCTTGGTTCTCCACAATGATACTGAGCATGCTCACAAGGGCGCTCTGGAAACCATaGAGGGAACTGAAAGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: TVKRPSWFSTMILSMLTRALWKP*RELKAL Trigger: CAGAGCTTTCAGTTCCCTTCATGGTTTCCAGAGCGC...CCTTGTGAGCATGCTCAGTATCATTGTGGAGAACCAAGAGGGCCTCTTAACTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000332050.10 |
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| CDS-3UTR GCA 90 bp | ACAACCATGAACATTGTTACAGTTAAGAGGCCCTCTTGGTTCTCCACAATGATAAGTAGGGCCGATCTCTaGGCTCCTGACGGTGCTCGC | + |
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Preference number: 4 (lower is better) Translates to: TTMNIVTVKRPSWFSTMISRADL*APDGAR Trigger: GCGAGCACCGTCAGGAGCGCAGAGATCGGCCCTACT...TATCATTGTGGAGAACCAAGAGGGCCTCTTAACTGTAACAATGTTCATGGTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000331029.11 ENST00000332050.10 ENST00000360091.3 ENST00000397938.7 ENST00000629659.2 |
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| CDS-3UTR GCA 90 bp | AAGAGGCCCTCTTGGTTCTCCACAATGATACTGAGCATGCTCACAAGGGGTTCCCTTCATCTGGATCTCTaGTCATGCCTCCACGATCAA | + |
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Preference number: 4 (lower is better) Translates to: KRPSWFSTMILSMLTRGSLHLDL*SCLHDQ Trigger: TTGATCGTGGAGGCATGAGCAGAGATCCAGATGAAG...GGAACCCCTTGTGAGCATGCTCAGTATCATTGTGGAGAACCAAGAGGGCCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000331029.11 |
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| CDS-3UTR CCA 90 bp | ACAGTTAAGAGGCCCTCTTGGTTCTCCACAATGATACTGAGCATGCTCACAAGGAGCCTTGGCAGTGGGTaGGTCTTCATAGGACACTGT | + |
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Preference number: 4 (lower is better) Translates to: TVKRPSWFSTMILSMLTRSLGSG*VFIGHC Trigger: ACAGTGTCCTATGAAGACCCACCCACTGCCAAGGCT...CCTTGTGAGCATGCTCAGTATCATTGTGGAGAACCAAGAGGGCCTCTTAACTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000331029.11 ENST00000332050.10 ENST00000360091.3 ENST00000397938.7 ENST00000629659.2 |
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| CDS-3UTR CCA 90 bp | ACAACCATGAACATTGTTACAGTTAAGAGGCCCTCTTGGTTCTCCACAATGATATCTGCCCTCACGGGGTaGCAGACCACCCCGCATACT | + |
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Preference number: 4 (lower is better) Translates to: TTMNIVTVKRPSWFSTMISALTG*QTTPHT Trigger: AGTATGCGGGGTGGTCTGCCACCCCGTGAGGGCAGA...TATCATTGTGGAGAACCAAGAGGGCCTCTTAACTGTAACAATGTTCATGGTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000331029.11 ENST00000332050.10 ENST00000360091.3 ENST00000397938.7 ENST00000629659.2 |
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| CDS-3UTR CCA 90 bp | ACAACCATGAACATTGTTACAGTTAAGAGGCCCTCTTGGTTCTCCACAATGATATGGACCTCCACGGAGTaGTGGTGGCATGCCTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: TTMNIVTVKRPSWFSTMIWTSTE*WWHASA Trigger: GGCAGAGGCATGCCACCACCACTCCGTGGAGGTCCA...TATCATTGTGGAGAACCAAGAGGGCCTCTTAACTGTAACAATGTTCATGGTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000331029.11 ENST00000332050.10 ENST00000360091.3 ENST00000397938.7 ENST00000629659.2 |
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| CDS-3UTR CCA 90 bp | AAGAGGCCCTCTTGGTTCTCCACAATGATACTGAGCATGCTCACAAGGGGTTCCGTTAAGAGGCCCTCTTaGTTCTCCACAATGATACTG | + |
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Preference number: 4 (lower is better) Translates to: KRPSWFSTMILSMLTRGSVKRPS*FSTMIL Trigger: CAGTATCATTGTGGAGAACCAAGAGGGCCTCTTAAC...GGAACCCCTTGTGAGCATGCTCAGTATCATTGTGGAGAACCAAGAGGGCCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000331029.11 ENST00000332050.10 ENST00000360091.3 ENST00000397938.7 ENST00000629659.2 |
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| CDS-3UTR CCA 90 bp | ACAGTTAAGAGGCCCTCTTGGTTCTCCACAATGATACTGAGCATGCTCACAAGGCACCAATTGAAGGATTaGGACACTGCCAGTCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: TVKRPSWFSTMILSMLTRHQLKD*DTASLQ Trigger: CTGGAGACTGGCAGTGTCCCAATCCTTCAATTGGTG...CCTTGTGAGCATGCTCAGTATCATTGTGGAGAACCAAGAGGGCCTCTTAACTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360091.3 |
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| CDS-3UTR TCA 90 bp | ACAACCATGAACATTGTTACAGTTAAGAGGCCCTCTTGGTTCTCCACAATGATAGTGGTCCTGTCGGAATaGACTCTGCTGCCCGTAGCT | + |
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Preference number: 4 (lower is better) Translates to: TTMNIVTVKRPSWFSTMIVVLSE*TLLPVA Trigger: AGCTACGGGCAGCAGAGTTCATTCCGACAGGACCAC...TATCATTGTGGAGAACCAAGAGGGCCTCTTAACTGTAACAATGTTCATGGTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331029.11 ENST00000397938.7 |
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| CDS-3UTR TCA 90 bp | TCCTCTGGTTCATTACCAAACAACAAGTATGCAGTTACCAAAGTTACAGAAGGAGTGGTCCTGTCGGAATaGACTCTGCTGCCCGTAGCT | + |
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Preference number: 4 (lower is better) Translates to: SSGSLPNNKYAVTKVTEGVVLSE*TLLPVA Trigger: AGCTACGGGCAGCAGAGTTCATTCCGACAGGACCAC...TCCTTCTGTAACTTTGGTAACTGCATACTTGTTGTTTGGTAATGAACCAGAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000333395.10 |
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| CDS-3UTR CCA 90 bp | ACAGTTAAGAGGCCCTCTTGGTTCTCCACAATGATACTGAGCATGCTCACAAGGGTTAAGAGGCCCTCTTaGTTCTCCACAATGATACTG | + |
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Preference number: 4 (lower is better) Translates to: TVKRPSWFSTMILSMLTRVKRPS*FSTMIL Trigger: CAGTATCATTGTGGAGAACCAAGAGGGCCTCTTAAC...CCTTGTGAGCATGCTCAGTATCATTGTGGAGAACCAAGAGGGCCTCTTAACTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000331029.11 ENST00000332050.10 ENST00000360091.3 ENST00000397938.7 ENST00000629659.2 |
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| CDS-3UTR TCA 90 bp | ACAGTTAAGAGGCCCTCTTGGTTCTCCACAATGATACTGAGCATGCTCACAAGGAACCATGAAGGGAACTaGAAGCTCTGGTTTCAAAAC | + |
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Preference number: 4 (lower is better) Translates to: TVKRPSWFSTMILSMLTRNHEGN*KLWFQN Trigger: GTTTTGAAACCAGAGCTTTCAGTTCCCTTCATGGTT...CCTTGTGAGCATGCTCAGTATCATTGTGGAGAACCAAGAGGGCCTCTTAACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332050.10 |
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| CDS-3UTR CCA 90 bp | ACAACCATGAACATTGTTACAGTTAAGAGGCCCTCTTGGTTCTCCACAATGATAAGCCTTGGCAGTGGGTaGGTCTTCATAGGACACTGT | + |
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Preference number: 4 (lower is better) Translates to: TTMNIVTVKRPSWFSTMISLGSG*VFIGHC Trigger: ACAGTGTCCTATGAAGACCCACCCACTGCCAAGGCT...TATCATTGTGGAGAACCAAGAGGGCCTCTTAACTGTAACAATGTTCATGGTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000331029.11 ENST00000332050.10 ENST00000360091.3 ENST00000397938.7 ENST00000629659.2 |
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| CDS-3UTR TCA 90 bp | CTAGAGTATTATACCTCCTCTGGTTCATTACCAAACAACAAGTATGCAGTTACCCATTATGCTGCCGGCTaGGTACTGAGTACGGGTACT | + |
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Preference number: 4 (lower is better) Translates to: LEYYTSSGSLPNNKYAVTHYAAG*VLSTGT Trigger: AGTACCCGTACTCAGTACTCAGCCGGCAGCATAATG...GGTAACTGCATACTTGTTGTTTGGTAATGAACCAGAGGAGGTATAATACTCTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000333395.10 |
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| CDS-3UTR TCA 90 bp | ACAACCATGAACATTGTTACAGTTAAGAGGCCCTCTTGGTTCTCCACAATGATAGCAGAAATCACCAATTaGAGGATTGGGACACTGCCA | + |
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Preference number: 4 (lower is better) Translates to: TTMNIVTVKRPSWFSTMIAEITN*RIGTLP Trigger: TGGCAGTGTCCCAATCCTTCAATTGGTGATTTCTGC...TATCATTGTGGAGAACCAAGAGGGCCTCTTAACTGTAACAATGTTCATGGTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360091.3 |
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| CDS-3UTR GCA 90 bp | ACAACCATGAACATTGTTACAGTTAAGAGGCCCTCTTGGTTCTCCACAATGATAGGTTTCCACAACCCCTaGATACAATTACATCACAGC | + |
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Preference number: 4 (lower is better) Translates to: TTMNIVTVKRPSWFSTMIGFHNP*IQLHHS Trigger: GCTGTGATGTAATTGTATGCAGGGGTTGTGGAAACC...TATCATTGTGGAGAACCAAGAGGGCCTCTTAACTGTAACAATGTTCATGGTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360091.3 |
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| CDS-3UTR CCA 90 bp | ACAACCATGAACATTGTTACAGTTAAGAGGCCCTCTTGGTTCTCCACAATGATAGTTAAGAGGCCCTCTTaGTTCTCCACAATGATACTG | + |
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Preference number: 4 (lower is better) Translates to: TTMNIVTVKRPSWFSTMIVKRPS*FSTMIL Trigger: CAGTATCATTGTGGAGAACCAAGAGGGCCTCTTAAC...TATCATTGTGGAGAACCAAGAGGGCCTCTTAACTGTAACAATGTTCATGGTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000331029.11 ENST00000332050.10 ENST00000360091.3 ENST00000397938.7 ENST00000629659.2 |
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| CDS-3UTR TCA 90 bp | TATTATACCTCCTCTGGTTCATTACCAAACAACAAGTATGCAGTTACCAAAGTTCTGCCGGCTGAGTACTaGGTACGGGTACTTTTTAAG | + |
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Preference number: 4 (lower is better) Translates to: YYTSSGSLPNNKYAVTKVLPAEY*VRVLFK Trigger: CTTAAAAAGTACCCGTACTCAGTACTCAGCCGGCAG...AACTTTGGTAACTGCATACTTGTTGTTTGGTAATGAACCAGAGGAGGTATAATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000333395.10 |
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| CDS-3UTR GCA 90 bp | TCTGGTTCATTACCAAACAACAAGTATGCAGTTACCAAAGTTACAGAAGGATTCTCCCACTTTTCATTATaGTGCCGGCTGAGTACTGAG | + |
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Preference number: 4 (lower is better) Translates to: SGSLPNNKYAVTKVTEGFSHFSL*CRLSTE Trigger: CTCAGTACTCAGCCGGCAGCATAATGAAAAGTGGGA...GAATCCTTCTGTAACTTTGGTAACTGCATACTTGTTGTTTGGTAATGAACCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333395.10 |
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| CDS-3UTR CCA 90 bp | CTAGAGTATTATACCTCCTCTGGTTCATTACCAAACAACAAGTATGCAGTTACCTTTTTCCTCTCCATATaGACACCGTGTCTAGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: LEYYTSSGSLPNNKYAVTFFLSI*TPCLVP Trigger: TGGGACTAGACACGGTGTCCATATGGAGAGGAAAAA...GGTAACTGCATACTTGTTGTTTGGTAATGAACCAGAGGAGGTATAATACTCTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000333395.10 |
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| CDS-3UTR GCA 90 bp | ATTCTAGAGTATTATACCTCCTCTGGTTCATTACCAAACAACAAGTATGCAGTTCACTTTTCATTATGCTaGCGGCTGAGTACTGAGTAC | + |
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Preference number: 4 (lower is better) Translates to: ILEYYTSSGSLPNNKYAVHFSLC*RLSTEY Trigger: GTACTCAGTACTCAGCCGGCAGCATAATGAAAAGTG...AACTGCATACTTGTTGTTTGGTAATGAACCAGAGGAGGTATAATACTCTAGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333395.10 |
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| CDS-3UTR CCA 90 bp | TCCTCTGGTTCATTACCAAACAACAAGTATGCAGTTACCAAAGTTACAGAAGGAGTATTATACCTCCTCTaGTTCATTACCAAACAACAA | + |
|
Preference number: 4 (lower is better) Translates to: SSGSLPNNKYAVTKVTEGVLYLL*FITKQQ Trigger: TTGTTGTTTGGTAATGAACCAGAGGAGGTATAATAC...TCCTTCTGTAACTTTGGTAACTGCATACTTGTTGTTTGGTAATGAACCAGAGGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000333395.10 |
||
| CDS GCA 90 bp | GGTATGCTGCAAAGCAAGATGCATTCTATCCCTAGCTCCTGCCTCTaGCAGACCAGGCAGGATCCATGCCTTTCCCTTCGGGACTTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: GMLQSKMHSIPSSCL*QTRQDPCLSLRDFG Trigger: GCCGAAGTCCCGAAGGGAAAGGCATGGATCCTGCCTGGTCTGGCAGAGGCAGGAGCTAGGGATAGAATGCATCTTGCTTTGCAGCATACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479135.5 |
||
| CDS CCA 90 bp | CCCCACTCCTGCCTTAGCCATCTTCTGATGCTGGTTTGCCTGCCCTaGCATTTTCTATGCCCAGACAGGTATCCACTGAGCACAGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: PHSCLSHLLMLVCLP*HFLCPDRYPLSTAT Trigger: GGTGGCTGTGCTCAGTGGATACCTGTCTGGGCATAGAAAATGCCAGGGCAGGCAAACCAGCATCAGAAGATGGCTAAGGCAGGAGTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000610553.1 |
||
| CDS GCA 90 bp | CAGGATAGGCCCCACTCCTGCCTTAGCCATCTTCTGATGCTGGTTTaGCTGCCCTGGCATTTTCTATGCCCAGACAGGTATCCACTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: QDRPHSCLSHLLMLV*LPWHFLCPDRYPLS Trigger: GCTCAGTGGATACCTGTCTGGGCATAGAAAATGCCAGGGCAGGCAAACCAGCATCAGAAGATGGCTAAGGCAGGAGTGGGGCCTATCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000610553.1 |
||
| CDS GCA 90 bp | TTCACAGGTATGCTGCAAAGCAAGATGCATTCTATCCCTAGCTCCTaGCTCTGCCAGACCAGGCAGGATCCATGCCTTTCCCTTCGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: FTGMLQSKMHSIPSS*LCQTRQDPCLSLRD Trigger: GTCCCGAAGGGAAAGGCATGGATCCTGCCTGGTCTGGCAGAGGCAGGAGCTAGGGATAGAATGCATCTTGCTTTGCAGCATACCTGTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479135.5 |
||
| CDS TCA 90 bp | TGGTTTGCCTGCCCTGGCATTTTCTATGCCCAGACAGGTATCCACTaGGCACAGCCACCTCGTAGGGGTAGTCAGACTTTGATACCACCA | + |
|
Preference number: 5 (lower is better) Translates to: WFACPGIFYAQTGIH*AQPPRRGSQTLIPP Trigger: TGGTGGTATCAAAGTCTGACTACCCCTACGAGGTGGCTGTGCTCAGTGGATACCTGTCTGGGCATAGAAAATGCCAGGGCAGGCAAACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000610553.1 |
||
| CDS-3UTR CAA 90 bp | AAGAGGCCCTCTTGGTTCTCCACAATGATACTGAGCATGCTCACAAGGGGTTCCTCGCGTCCGCAACTCTaGTCCCAGTCCTCTCTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: KRPSWFSTMILSMLTRGSSRPQL*SQSSLK Trigger: CTTTAGAGAGGACTGGGACAAGAGTTGCGGACGCGA...GGAACCCCTTGTGAGCATGCTCAGTATCATTGTGGAGAACCAAGAGGGCCTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000332050.10 ENST00000629659.2 |
||
| CDS-3UTR CAA 90 bp | AAGAGGCCCTCTTGGTTCTCCACAATGATACTGAGCATGCTCACAAGGGGTTCCTTTCCACAACCCGGATaGGGACACTGCCAGTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: KRPSWFSTMILSMLTRGSFPQPG*GHCQSP Trigger: TGGAGACTGGCAGTGTCCCAATCCGGGTTGTGGAAA...GGAACCCCTTGTGAGCATGCTCAGTATCATTGTGGAGAACCAAGAGGGCCTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000331029.11 ENST00000332050.10 ENST00000397938.7 ENST00000629659.2 |
||
| CDS TCA 90 bp | GCCAATTTTCGCGGGTTAGTGTACCCACAGATTGCGAACTGCAGGTaGTGGCTAGGCGACACTCTTAAACGCTCCTTCCATCAAGGACCA | + |
|
Preference number: 5 (lower is better) Translates to: ANFRGLVYPQIANCR*WLGDTLKRSFHQGP Trigger: TGGTCCTTGATGGAAGGAGCGTTTAAGAGTGTCGCCTAGCCATCACCTGCAGTTCGCAATCTGTGGGTACACTAACCCGCGAAAATTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493426.1 |
||
| CDS GCA 90 bp | CAAAGTAGACCAAAGTGTGGAAGTGAACAGGATAGGCCCCACTCCTaGCTTAGCCATCTTCTGATGCTGGTTTGCCTGCCCTGGCATTTT | + |
|
Preference number: 5 (lower is better) Translates to: QSRPKCGSEQDRPHS*LSHLLMLVCLPWHF Trigger: AAAATGCCAGGGCAGGCAAACCAGCATCAGAAGATGGCTAAGGCAGGAGTGGGGCCTATCCTGTTCACTTCCACACTTTGGTCTACTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610553.1 |
||
| CDS-3UTR CAA 90 bp | ACAGTTAAGAGGCCCTCTTGGTTCTCCACAATGATACTGAGCATGCTCACAAGGTTTCCACAACCCGGATaGGGACACTGCCAGTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TVKRPSWFSTMILSMLTRFPQPG*GHCQSP Trigger: TGGAGACTGGCAGTGTCCCAATCCGGGTTGTGGAAA...CCTTGTGAGCATGCTCAGTATCATTGTGGAGAACCAAGAGGGCCTCTTAACTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000331029.11 ENST00000332050.10 ENST00000397938.7 ENST00000629659.2 |
||
| CDS CCA 90 bp | CCCACAGGATCCGACAGACTGCTTCACAGTCTGTTGAAAAACCTATaGGGAAAGCCATGGTCTCTTCTATGGCTGCAAGAGAGACTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: PTGSDRLLHSLLKNL*GKPWSLLWLQERLL Trigger: GAGAAGTCTCTCTTGCAGCCATAGAAGAGACCATGGCTTTCCCCATAGGTTTTTCAACAGACTGTGAAGCAGTCTGTCGGATCCTGTGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000479135.5 ENST00000483415.5 |
||
| CDS-3UTR CAA 90 bp | AAGAGGCCCTCTTGGTTCTCCACAATGATACTGAGCATGCTCACAAGGGGTTCCAGCAGAAATCACCAATaGAAGGATTGGGACACTGCC | + |
|
Preference number: 5 (lower is better) Translates to: KRPSWFSTMILSMLTRGSSRNHQ*KDWDTA Trigger: GGCAGTGTCCCAATCCTTCAATTGGTGATTTCTGCT...GGAACCCCTTGTGAGCATGCTCAGTATCATTGTGGAGAACCAAGAGGGCCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360091.3 |
||
| CDS GCA 90 bp | ACCAGAAGAGCTTGGTATAGAGGGGAGGAGCAAGTGGGGGTTAACTaGTGTGATAAACCTTTCCATGTTCATAAAGGTGCACCCTCAACC | + |
|
Preference number: 5 (lower is better) Translates to: TRRAWYRGEEQVGVN*CDKPFHVHKGAPST Trigger: GGTTGAGGGTGCACCTTTATGAACATGGAAAGGTTTATCACAGCAGTTAACCCCCACTTGCTCCTCCCCTCTATACCAAGCTCTTCTGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000469669.5 ENST00000479135.5 |
||
| CDS TCA 90 bp | TACTACCCACAGAGGCTTCTCACCTCTGGAAACCATGAAGGGAACTaGAAGCTCTGGTTTCAAAACCATTCTTTGTTCTCCCCGACCCAA | + |
|
Preference number: 5 (lower is better) Translates to: YYPQRLLTSGNHEGN*KLWFQNHSLFSPTQ Trigger: TTGGGTCGGGGAGAACAAAGAATGGTTTTGAAACCAGAGCTTTCAGTTCCCTTCATGGTTTCCAGAGGTGAGAAGCCTCTGTGGGTAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000479135.5 ENST00000483415.5 |
||
| CDS TCA 90 bp | CAGGGCAGCTTGCTCAAATTTCCTCAATATACAACCTTGCTTGTCTaGTTGTACACACCAGTGTGGTTGGTTCCTTTCATTTCGGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: QGSLLKFPQYTTLLV*LYTPVWLVPFISGA Trigger: AGCCCCCGAAATGAAAGGAACCAACCACACTGGTGTGTACAATCAGACAAGCAAGGTTGTATATTGAGGAAATTTGAGCAAGCTGCCCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000469669.5 ENST00000479135.5 |
||
| CDS CCA 90 bp | CTAGAGTACCTTTCCTGTAGGAGGTGTTACAACCATTCCTGGTGCTaGACTCTTCTTCCTCATGGTCAATGGGTACAATTAAGCCATGCA | + |
|
Preference number: 5 (lower is better) Translates to: LEYLSCRRCYNHSWC*TLLPHGQWVQLSHA Trigger: TGCATGGCTTAATTGTACCCATTGACCATGAGGAAGAAGAGTCCAGCACCAGGAATGGTTGTAACACCTCCTACAGGAAAGGTACTCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479135.5 |
||
| CDS CCA 90 bp | GACAGACTGCTTCACAGTCTGTTGAAAAACCTATGGGGAAAGCCATaGTCTCTTCTATGGCTGCAAGAGAGACTTCTCATCCAGAAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: DRLLHSLLKNLWGKP*SLLWLQERLLIQKE Trigger: CTCTTTCTGGATGAGAAGTCTCTCTTGCAGCCATAGAAGAGACCATGGCTTTCCCCATAGGTTTTTCAACAGACTGTGAAGCAGTCTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000479135.5 ENST00000483415.5 |
||
| CDS-3UTR CAA 90 bp | ACAACCATGAACATTGTTACAGTTAAGAGGCCCTCTTGGTTCTCCACAATGATAACGAGACTAGGCTGTTaGGAATGGTTCCGTCCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TTMNIVTVKRPSWFSTMITRLGC*EWFRPL Trigger: CAGCGGACGGAACCATTCCAAACAGCCTAGTCTCGT...TATCATTGTGGAGAACCAAGAGGGCCTCTTAACTGTAACAATGTTCATGGTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000332050.10 ENST00000629659.2 |
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| CDS-3UTR CAA 90 bp | ACAGTTAAGAGGCCCTCTTGGTTCTCCACAATGATACTGAGCATGCTCACAAGGTTTCAAAACCATTCTTaGTTCTCCCCGACCCAACGA | + |
|
Preference number: 5 (lower is better) Translates to: TVKRPSWFSTMILSMLTRFQNHS*FSPTQR Trigger: TCGTTGGGTCGGGGAGAACAAAGAATGGTTTTGAAA...CCTTGTGAGCATGCTCAGTATCATTGTGGAGAACCAAGAGGGCCTCTTAACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000332050.10 |
||
| CDS GCA 90 bp | GTGCTGGACTCTTCTTCCTCATGGTCAATGGGTACAATTAAGCCATaGAATAAAAAGTTTGGTTTACACTTTGGGAGGCTGAGGTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VLDSSSSWSMGTIKP*NKKFGLHFGRLRWE Trigger: CTCCCACCTCAGCCTCCCAAAGTGTAAACCAAACTTTTTATTGCATGGCTTAATTGTACCCATTGACCATGAGGAAGAAGAGTCCAGCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000479135.5 |
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| CDS-3UTR CAA 90 bp | ACAACCATGAACATTGTTACAGTTAAGAGGCCCTCTTGGTTCTCCACAATGATATCACCAATTGAAGGATaGGGACACTGCCAGTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TTMNIVTVKRPSWFSTMISPIEG*GHCQSP Trigger: TGGAGACTGGCAGTGTCCCAATCCTTCAATTGGTGA...TATCATTGTGGAGAACCAAGAGGGCCTCTTAACTGTAACAATGTTCATGGTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000360091.3 |
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| CDS GCA 90 bp | CCTTTCTTCAGGGCAGCTTGCTCAAATTTCCTCAATATACAACCTTaGTTGTCTGATTGTACACACCAGTGTGGTTGGTTCCTTTCATTT | + |
|
Preference number: 5 (lower is better) Translates to: PFFRAACSNFLNIQP*LSDCTHQCGWFLSF Trigger: AAATGAAAGGAACCAACCACACTGGTGTGTACAATCAGACAAGCAAGGTTGTATATTGAGGAAATTTGAGCAAGCTGCCCTGAAGAAAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000469669.5 ENST00000479135.5 |
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| CDS CCA 90 bp | CTCAATATACAACCTTGCTTGTCTGATTGTACACACCAGTGTGGTTaGTTCCTTTCATTTCGGGGGCTGGTATTAATAGTGCAATACTTG | + |
|
Preference number: 5 (lower is better) Translates to: LNIQPCLSDCTHQCG*FLSFRGLVLIVQYL Trigger: CAAGTATTGCACTATTAATACCAGCCCCCGAAATGAAAGGAACCAACCACACTGGTGTGTACAATCAGACAAGCAAGGTTGTATATTGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000469669.5 ENST00000479135.5 |
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| CDS GCA 90 bp | GCTAAACACATCTCCAAACAATGCATCTCTCTCATCTTGTCACTATaGCTTTCTTCAGGGCAGCTTGCTCAAATTTCCTCAATATACAAC | + |
|
Preference number: 5 (lower is better) Translates to: AKHISKQCISLILSL*LSSGQLAQISSIYN Trigger: GTTGTATATTGAGGAAATTTGAGCAAGCTGCCCTGAAGAAAGGCATAGTGACAAGATGAGAGAGATGCATTGTTTGGAGATGTGTTTAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000469669.5 ENST00000479135.5 |
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| CDS GCA 90 bp | GAAAGGAGAATTTACAACAAATACCAAGGCTCAACGGACTGGGGGTaGAACTTTATAGACATATCAGTTAGAATAATGACTATGGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: ERRIYNKYQGSTDWG*NFIDISVRIMTMAM Trigger: CATGGCCATAGTCATTATTCTAACTGATATGTCTATAAAGTTGCACCCCCAGTCCGTTGAGCCTTGGTATTTGTTGTAAATTCTCCTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000469669.5 ENST00000479135.5 ENST00000483415.5 |
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| CDS CCA 90 bp | CGCTGTGAAAGGAGAATTTACAACAAATACCAAGGCTCAACGGACTaGGGGTGCAACTTTATAGACATATCAGTTAGAATAATGACTATG | + |
|
Preference number: 5 (lower is better) Translates to: RCERRIYNKYQGSTD*GCNFIDISVRIMTM Trigger: CATAGTCATTATTCTAACTGATATGTCTATAAAGTTGCACCCCCAGTCCGTTGAGCCTTGGTATTTGTTGTAAATTCTCCTTTCACAGCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000469669.5 ENST00000479135.5 ENST00000483415.5 |
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| CDS CCA 90 bp | TGTTACAACCATTCCTGGTGCTGGACTCTTCTTCCTCATGGTCAATaGGTACAATTAAGCCATGCAATAAAAAGTTTGGTTTACACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: CYNHSWCWTLLPHGQ*VQLSHAIKSLVYTL Trigger: CAAAGTGTAAACCAAACTTTTTATTGCATGGCTTAATTGTACCCATTGACCATGAGGAAGAAGAGTCCAGCACCAGGAATGGTTGTAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000479135.5 |
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| CDS TCA 72 bp | CTAAGGGGCCAGAGCGGGGGTGAGCGGGTCTCAGCGTaGAACCGGAGAGGCTCTCAGCACGAGACTAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LRGQSGGERVSA*NRRGSQHETRL Trigger: CAGCCTAGTCTCGTGCTGAGAGCCTCTCCGGTTTCACGCTGAGACCCGCTCACCCCCGCTCTGGCCCCTTAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000332050.10 ENST00000444626.5 ENST00000629659.2 |
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| CDS CAA 90 bp | AGGAGGGATGAACCACCGCTTACTCGTTCTTCGCGTCCGCAACTCTaGTCCCAGTCCTCTCTAAAGAGCGCCCGACGTGACACTCGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RRDEPPLTRSSRPQL*SQSSLKSARRDTRA Trigger: GGCCCGAGTGTCACGTCGGGCGCTCTTTAGAGAGGACTGGGACAAGAGTTGCGGACGCGAAGAACGAGTAAGCGGTGGTTCATCCCTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000332050.10 ENST00000444626.5 ENST00000629659.2 |
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| CDS TCA 72 bp | AAGAGGTTTAGCACCAGGAAGCTGAGGGGACACTCATaGAACCTGCACCTACCCGGGGGCGGAAAGGGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: KRFSTRKLRGHS*NLHLPGGGKGG Trigger: GCCACCCTTTCCGCCCCCGGGTAGGTGCAGGTTTCATGAGTGTCCCCTCAGCTTCCTGGTGCTAAACCTCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000610553.1 |
||
| CDS CCA 72 bp | GGCAGGATCCATGCCTTTCCCTTCGGGACTTCGGCGTaGAGCATGACCAAAACCACGAAAGTCTGCAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GRIHAFPFGTSA*SMTKTTKVCSS Trigger: GGAGCTGCAGACTTTCGTGGTTTTGGTCATGCTCCACGCCGAAGTCCCGAAGGGAAAGGCATGGATCCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479135.5 |
||
| CDS CAA 72 bp | GAACCACCGCTTACTCGTTCTTCGCGTCCGCAACTCTaGTCCCAGTCCTCTCTAAAGAGCGCCCGACGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: EPPLTRSSRPQL*SQSSLKSARRD Trigger: GTCACGTCGGGCGCTCTTTAGAGAGGACTGGGACAAGAGTTGCGGACGCGAAGAACGAGTAAGCGGTGGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000332050.10 ENST00000444626.5 ENST00000629659.2 |
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| CDS GCA 72 bp | AGGTGGGTGGACTGCTTGAGGCTGGGAGGTCAAGGCTaGAGTAAGATCCAGCCTAGGCAACAGAGACCCTAT | + |
|
Preference number: 6 (lower is better) Translates to: RWVDCLRLGGQG*SKIQPRQQRPY Trigger: ATAGGGTCTCTGTTGCCTAGGCTGGATCTTACTGCAGCCTTGACCTCCCAGCCTCAAGCAGTCCACCCACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479135.5 |
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| CDS GCA 72 bp | CAAAGCAAGATGCATTCTATCCCTAGCTCCTGCCTCTaGCAGACCAGGCAGGATCCATGCCTTTCCCTTCGG | + |
|
Preference number: 6 (lower is better) Translates to: QSKMHSIPSSCL*QTRQDPCLSLR Trigger: CCGAAGGGAAAGGCATGGATCCTGCCTGGTCTGGCAGAGGCAGGAGCTAGGGATAGAATGCATCTTGCTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479135.5 |
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| CDS GCA 72 bp | CTTCTGATGCTGGTTTGCCTGCCCTGGCATTTTCTATaGCCAGACAGGTATCCACTGAGCACAGCCACCTCG | + |
|
Preference number: 6 (lower is better) Translates to: LLMLVCLPWHFL*PDRYPLSTATS Trigger: CGAGGTGGCTGTGCTCAGTGGATACCTGTCTGGGCATAGAAAATGCCAGGGCAGGCAAACCAGCATCAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610553.1 |
||
| CDS GCA 72 bp | CCAAAGTGTGGAAGTGAACAGGATAGGCCCCACTCCTaGCTTAGCCATCTTCTGATGCTGGTTTGCCTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: PKCGSEQDRPHS*LSHLLMLVCLP Trigger: GGGCAGGCAAACCAGCATCAGAAGATGGCTAAGGCAGGAGTGGGGCCTATCCTGTTCACTTCCACACTTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610553.1 |
||
| CDS TCA 72 bp | CGCGGGTTAGTGTACCCACAGATTGCGAACTGCAGGTaGTGGCTAGGCGACACTCTTAAACGCTCCTTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: RGLVYPQIANCR*WLGDTLKRSFH Trigger: ATGGAAGGAGCGTTTAAGAGTGTCGCCTAGCCATCACCTGCAGTTCGCAATCTGTGGGTACACTAACCCGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493426.1 |
||
| CDS TCA 72 bp | TGCCCTGGCATTTTCTATGCCCAGACAGGTATCCACTaGGCACAGCCACCTCGTAGGGGTAGTCAGACTTTG | + |
|
Preference number: 6 (lower is better) Translates to: CPGIFYAQTGIH*AQPPRRGSQTL Trigger: CAAAGTCTGACTACCCCTACGAGGTGGCTGTGCTCAGTGGATACCTGTCTGGGCATAGAAAATGCCAGGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000610553.1 |
||
| CDS GCA 72 bp | ATGCTGCAAAGCAAGATGCATTCTATCCCTAGCTCCTaGCTCTGCCAGACCAGGCAGGATCCATGCCTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: MLQSKMHSIPSS*LCQTRQDPCLS Trigger: GGAAAGGCATGGATCCTGCCTGGTCTGGCAGAGGCAGGAGCTAGGGATAGAATGCATCTTGCTTTGCAGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479135.5 |
||
| CDS GCA 72 bp | CCCCACTCCTGCCTTAGCCATCTTCTGATGCTGGTTTaGCTGCCCTGGCATTTTCTATGCCCAGACAGGTAT | + |
|
Preference number: 6 (lower is better) Translates to: PHSCLSHLLMLV*LPWHFLCPDRY Trigger: ATACCTGTCTGGGCATAGAAAATGCCAGGGCAGGCAAACCAGCATCAGAAGATGGCTAAGGCAGGAGTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000610553.1 |
||
| CDS CCA 72 bp | ACGCTCCTTCCATCAAGGACCACTCTACTCCCATTTTaGAGTTCCCAACCGGGGCTTGCTTGCAAGTGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: TLLPSRTTLLPF*SSQPGLACKCL Trigger: AAGGCACTTGCAAGCAAGCCCCGGTTGGGAACTCCAAAATGGGAGTAGAGTGGTCCTTGATGGAAGGAGCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000493426.1 |
||
| CDS CAA 72 bp | AACGCTCCTTCCATCAAGGACCACTCTACTCCCATTTaGGAGTTCCCAACCGGGGCTTGCTTGCAAGTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: NAPSIKDHSTPI*EFPTGACLQVP Trigger: AGGCACTTGCAAGCAAGCCCCGGTTGGGAACTCCAAAATGGGAGTAGAGTGGTCCTTGATGGAAGGAGCGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493426.1 |
||
| CDS CAA 72 bp | CCACTCTACTCCCATTTTGGAGTTCCCAACCGGGGCTaGCTTGCAAGTGCCTTTAAGATTGCTTCTACTGGC | + |
|
Preference number: 6 (lower is better) Translates to: PLYSHFGVPNRG*LASAFKIASTG Trigger: GCCAGTAGAAGCAATCTTAAAGGCACTTGCAAGCAAGCCCCGGTTGGGAACTCCAAAATGGGAGTAGAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000493426.1 |
||
| CDS CAA 90 bp | ACACTCTTAAACGCTCCTTCCATCAAGGACCACTCTACTCCCATTTaGGAGTTCCCAACCGGGGCTTGCTTGCAAGTGCCTTTAAGATTG | + |
|
Preference number: 6 (lower is better) Translates to: TLLNAPSIKDHSTPI*EFPTGACLQVPLRL Trigger: CAATCTTAAAGGCACTTGCAAGCAAGCCCCGGTTGGGAACTCCAAAATGGGAGTAGAGTGGTCCTTGATGGAAGGAGCGTTTAAGAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493426.1 |
||
| CDS TCA 72 bp | CTCGCTCTCCAGCGCTCTGGAAACCATGAAGGGAACTaGAAGCTCTGGTTTCAAAACCATTCTTTGTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LALQRSGNHEGN*KLWFQNHSLFS Trigger: GGAGAACAAAGAATGGTTTTGAAACCAGAGCTTTCAGTTCCCTTCATGGTTTCCAGAGCGCTGGAGAGCGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000332050.10 |
||
| CDS CCA 72 bp | TCCGACAGACTGCTTCACAGTCTGTTGAAAAACCTATaGGGAAAGCCATGGTCTCTTCTATGGCTGCAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: SDRLLHSLLKNL*GKPWSLLWLQE Trigger: CTCTTGCAGCCATAGAAGAGACCATGGCTTTCCCCATAGGTTTTTCAACAGACTGTGAAGCAGTCTGTCGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000479135.5 ENST00000483415.5 |
||
| CDS CAA 72 bp | TCTACTCCCATTTTGGAGTTCCCAACCGGGGCTTGCTaGCAAGTGCCTTTAAGATTGCTTCTACTGGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: STPILEFPTGAC*QVPLRLLLLAF Trigger: AAAGGCCAGTAGAAGCAATCTTAAAGGCACTTGCAAGCAAGCCCCGGTTGGGAACTCCAAAATGGGAGTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000493426.1 |
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| CDS CAA 90 bp | ACCGTGAAGGACAGTGTACAGGCTGTGAGTGAACTACAGGGATTCTaGGTTAGTCTAACACAGCCACTACTTCCTCCAGTTAGAACAGAT | + |
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Preference number: 6 (lower is better) Translates to: TVKDSVQAVSELQGF*VSLTQPLLPPVRTD Trigger: ATCTGTTCTAACTGGAGGAAGTAGTGGCTGTGTTAGACTAACCAAGAATCCCTGTAGTTCACTCACAGCCTGTACACTGTCCTTCACGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000610553.1 |
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| CDS TCA 72 bp | CTACTACCCACAGAGGCTTCTCACCTCTGGAAACCATaGAGGGAACTGAAAGCTCTGGTTTCAAAACCATTC | + |
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Preference number: 6 (lower is better) Translates to: LLPTEASHLWKP*RELKALVSKPF Trigger: GAATGGTTTTGAAACCAGAGCTTTCAGTTCCCTTCATGGTTTCCAGAGGTGAGAAGCCTCTGTGGGTAGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000479135.5 ENST00000483415.5 |
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| CDS GCA 72 bp | GCTTGGTATAGAGGGGAGGAGCAAGTGGGGGTTAACTaGTGTGATAAACCTTTCCATGTTCATAAAGGTGCA | + |
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Preference number: 6 (lower is better) Translates to: AWYRGEEQVGVN*CDKPFHVHKGA Trigger: TGCACCTTTATGAACATGGAAAGGTTTATCACAGCAGTTAACCCCCACTTGCTCCTCCCCTCTATACCAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000469669.5 ENST00000479135.5 |
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| CDS GCA 72 bp | CCACAGATGGGGAGAATTCTTAAACTGTCCTTAAGTTaGTGGATTCTGGACTCCAAAAACTCTGGAGTGCCC | + |
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Preference number: 6 (lower is better) Translates to: PQMGRILKLSLS*WILDSKNSGVP Trigger: GGGCACTCCAGAGTTTTTGGAGTCCAGAATCCAGCAACTTAAGGACAGTTTAAGAATTCTCCCCATCTGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000493426.1 |
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| CDS CCA 72 bp | AAACCAGAAGAGCTTGGTATAGAGGGGAGGAGCAAGTaGGGGTTAACTGCTGTGATAAACCTTTCCATGTTC | + |
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Preference number: 6 (lower is better) Translates to: KPEELGIEGRSK*GLTAVINLSMF Trigger: GAACATGGAAAGGTTTATCACAGCAGTTAACCCCCACTTGCTCCTCCCCTCTATACCAAGCTCTTCTGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000469669.5 ENST00000479135.5 |
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| CDS CCA 72 bp | TTGAAAAACCTATGGGGAAAGCCATGGTCTCTTCTATaGCTGCAAGAGAGACTTCTCATCCAGAAAGAGGGG | + |
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Preference number: 6 (lower is better) Translates to: LKNLWGKPWSLL*LQERLLIQKEG Trigger: CCCCTCTTTCTGGATGAGAAGTCTCTCTTGCAGCCATAGAAGAGACCATGGCTTTCCCCATAGGTTTTTCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000479135.5 ENST00000483415.5 |
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| CDS CAA 72 bp | GACAGTGTACAGGCTGTGAGTGAACTACAGGGATTCTaGGTTAGTCTAACACAGCCACTACTTCCTCCAGTT | + |
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Preference number: 6 (lower is better) Translates to: DSVQAVSELQGF*VSLTQPLLPPV Trigger: AACTGGAGGAAGTAGTGGCTGTGTTAGACTAACCAAGAATCCCTGTAGTTCACTCACAGCCTGTACACTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000610553.1 |
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| CDS CAA 90 bp | AGGGCACTGGCTAAACACATCTCCAAACAATGCATCTCTCTCATCTaGTCACTATGCCTTTCTTCAGGGCAGCTTGCTCAAATTTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: RALAKHISKQCISLI*SLCLSSGQLAQISS Trigger: TGAGGAAATTTGAGCAAGCTGCCCTGAAGAAAGGCATAGTGACAAGATGAGAGAGATGCATTGTTTGGAGATGTGTTTAGCCAGTGCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000469669.5 ENST00000479135.5 |
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| CDS TCA 72 bp | CAGAGGCTTCTCACCTCTGGAAACCATGAAGGGAACTaGAAGCTCTGGTTTCAAAACCATTCTTTGTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: QRLLTSGNHEGN*KLWFQNHSLFS Trigger: GGAGAACAAAGAATGGTTTTGAAACCAGAGCTTTCAGTTCCCTTCATGGTTTCCAGAGGTGAGAAGCCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000479135.5 ENST00000483415.5 |
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| CDS CCA 72 bp | CAACCTTGCTTGTCTGATTGTACACACCAGTGTGGTTaGTTCCTTTCATTTCGGGGGCTGGTATTAATAGTG | + |
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Preference number: 6 (lower is better) Translates to: QPCLSDCTHQCG*FLSFRGLVLIV Trigger: CACTATTAATACCAGCCCCCGAAATGAAAGGAACCAACCACACTGGTGTGTACAATCAGACAAGCAAGGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000469669.5 ENST00000479135.5 |
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| CDS CCA 72 bp | CTTCACAGTCTGTTGAAAAACCTATGGGGAAAGCCATaGTCTCTTCTATGGCTGCAAGAGAGACTTCTCATC | + |
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Preference number: 6 (lower is better) Translates to: LHSLLKNLWGKP*SLLWLQERLLI Trigger: GATGAGAAGTCTCTCTTGCAGCCATAGAAGAGACCATGGCTTTCCCCATAGGTTTTTCAACAGACTGTGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000479135.5 ENST00000483415.5 |
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| CDS CCA 72 bp | GTCCTTAAGTTGCTGGATTCTGGACTCCAAAAACTCTaGAGTGCCCAGAACTTTTCCTGTCTTCCTTCTCAT | + |
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Preference number: 6 (lower is better) Translates to: VLKLLDSGLQKL*SAQNFSCLPSH Trigger: ATGAGAAGGAAGACAGGAAAAGTTCTGGGCACTCCAGAGTTTTTGGAGTCCAGAATCCAGCAACTTAAGGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000493426.1 |
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| CDS TCA 72 bp | ACAAACCAGACACTTCACTCAATCTCGGCATCGGGCTaGCAATTTAGAAATGAGGACACGACAACTCAAAGT | + |
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Preference number: 6 (lower is better) Translates to: TNQTLHSISASG*QFRNEDTTTQS Trigger: ACTTTGAGTTGTCGTGTCCTCATTTCTAAATTGTCAGCCCGATGCCGAGATTGAGTGAAGTGTCTGGTTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000610553.1 |
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| CDS GCA 72 bp | AGGGCAGCTTGCTCAAATTTCCTCAATATACAACCTTaGTTGTCTGATTGTACACACCAGTGTGGTTGGTTC | + |
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Preference number: 6 (lower is better) Translates to: RAACSNFLNIQP*LSDCTHQCGWF Trigger: GAACCAACCACACTGGTGTGTACAATCAGACAAGCAAGGTTGTATATTGAGGAAATTTGAGCAAGCTGCCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000469669.5 ENST00000479135.5 |
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| CDS CAA 90 bp | TTCTTCAGGGCAGCTTGCTCAAATTTCCTCAATATACAACCTTGCTaGTCTGATTGTACACACCAGTGTGGTTGGTTCCTTTCATTTCGG | + |
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Preference number: 6 (lower is better) Translates to: FFRAACSNFLNIQPC*SDCTHQCGWFLSFR Trigger: CCGAAATGAAAGGAACCAACCACACTGGTGTGTACAATCAGACAAGCAAGGTTGTATATTGAGGAAATTTGAGCAAGCTGCCCTGAAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000469669.5 ENST00000479135.5 |
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| CDS CAA 90 bp | ACCATTCAAAGGCAGTTAGTTAACAACTTAGGGTCATTAGAAGGGTaGTGTGTGTTCCATCCCAAATCTACTACCCACAGAGGCTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: TIQRQLVNNLGSLEG*CVFHPKSTTHRGFS Trigger: TGAGAAGCCTCTGTGGGTAGTAGATTTGGGATGGAACACACACAACCCTTCTAATGACCCTAAGTTGTTAACTAACTGCCTTTGAATGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000479135.5 ENST00000483415.5 |
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| CDS GCA 72 bp | ATCTCCAAACAATGCATCTCTCTCATCTTGTCACTATaGCTTTCTTCAGGGCAGCTTGCTCAAATTTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: ISKQCISLILSL*LSSGQLAQISS Trigger: TGAGGAAATTTGAGCAAGCTGCCCTGAAGAAAGGCATAGTGACAAGATGAGAGAGATGCATTGTTTGGAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000469669.5 ENST00000479135.5 |
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| CDS GCA 72 bp | TCTTACTTACCTACCACAAGCAAAAGGCCTTTTTCCTaGTCAGCAATATTGGAGGTAAACCCTAGAGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: SYLPTTSKRPFS*SAILEVNPRVS Trigger: AGAGACTCTAGGGTTTACCTCCAATATTGCTGAGCAGGAAAAAGGCCTTTTGCTTGTGGTAGGTAAGTAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000479135.5 |
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| CDS GCA 72 bp | CATTACAGGGTTAGACAAGATGGAAAGCATTTCCCATaGAAGAATGAGCAGGATAGTCAAACCTGTACTGGT | + |
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Preference number: 6 (lower is better) Translates to: HYRVRQDGKHFP*KNEQDSQTCTG Trigger: ACCAGTACAGGTTTGACTATCCTGCTCATTCTTGCATGGGAAATGCTTTCCATCTTGTCTAACCCTGTAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485037.5 |
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| CDS CAA 72 bp | GCAGCTTGCTCAAATTTCCTCAATATACAACCTTGCTaGTCTGATTGTACACACCAGTGTGGTTGGTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: AACSNFLNIQPC*SDCTHQCGWFL Trigger: AAGGAACCAACCACACTGGTGTGTACAATCAGACAAGCAAGGTTGTATATTGAGGAAATTTGAGCAAGCTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000469669.5 ENST00000479135.5 |
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| CDS CAA 72 bp | AGGCAGTTAGTTAACAACTTAGGGTCATTAGAAGGGTaGTGTGTGTTCCATCCCAAATCTACTACCCACAGA | + |
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Preference number: 6 (lower is better) Translates to: RQLVNNLGSLEG*CVFHPKSTTHR Trigger: TCTGTGGGTAGTAGATTTGGGATGGAACACACACAACCCTTCTAATGACCCTAAGTTGTTAACTAACTGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000479135.5 ENST00000483415.5 |
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| CDS CAA 72 bp | TGCAAATGGCACCTGAAGCAGTTTTTCATTAGCACCTaGCTGTGTGTGATGTTAGAAAGTTTGGGGGTTCAA | + |
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Preference number: 6 (lower is better) Translates to: CKWHLKQFFIST*LCVMLESLGVQ Trigger: TTGAACCCCCAAACTTTCTAACATCACACACAGCAAGGTGCTAATGAAAAACTGCTTCAGGTGCCATTTGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000485037.5 |
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| CDS CAA 90 bp | ACATGGATCTGCAAATGGCACCTGAAGCAGTTTTTCATTAGCACCTaGCTGTGTGTGATGTTAGAAAGTTTGGGGGTTCAACAAATGAAA | + |
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Preference number: 6 (lower is better) Translates to: TWICKWHLKQFFIST*LCVMLESLGVQQMK Trigger: TTTCATTTGTTGAACCCCCAAACTTTCTAACATCACACACAGCAAGGTGCTAATGAAAAACTGCTTCAGGTGCCATTTGCAGATCCATGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000485037.5 |
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| CDS GCA 72 bp | TCTTCTTCCTCATGGTCAATGGGTACAATTAAGCCATaGAATAAAAAGTTTGGTTTACACTTTGGGAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: SSSSWSMGTIKP*NKKFGLHFGRL Trigger: CAGCCTCCCAAAGTGTAAACCAAACTTTTTATTGCATGGCTTAATTGTACCCATTGACCATGAGGAAGAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000479135.5 |
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| CDS CCA 72 bp | TTCATATGTTCAACGATTCTGAGTACAAACAGAAGTTaGGGACAAACACTGTGGAAAACAGCTGCATTCCTT | + |
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Preference number: 6 (lower is better) Translates to: FICSTILSTNRS*GQTLWKTAAFL Trigger: AAGGAATGCAGCTGTTTTCCACAGTGTTTGTCCCCAACTTCTGTTTGTACTCAGAATCGTTGAACATATGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000479135.5 ENST00000483415.5 |
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| CDS TCA 72 bp | TTGCTCAAATTTCCTCAATATACAACCTTGCTTGTCTaGTTGTACACACCAGTGTGGTTGGTTCCTTTCATT | + |
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Preference number: 6 (lower is better) Translates to: LLKFPQYTTLLV*LYTPVWLVPFI Trigger: AATGAAAGGAACCAACCACACTGGTGTGTACAATCAGACAAGCAAGGTTGTATATTGAGGAAATTTGAGCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000469669.5 ENST00000479135.5 |
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| CDS CCA 72 bp | AGGAGAATTTACAACAAATACCAAGGCTCAACGGACTaGGGGTGCAACTTTATAGACATATCAGTTAGAATA | + |
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Preference number: 6 (lower is better) Translates to: RRIYNKYQGSTD*GCNFIDISVRI Trigger: TATTCTAACTGATATGTCTATAAAGTTGCACCCCCAGTCCGTTGAGCCTTGGTATTTGTTGTAAATTCTCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000469669.5 ENST00000479135.5 ENST00000483415.5 |
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| CDS CAA 72 bp | AATACTGAGGCAATGAAAAAGGGCATGTTAACAACATaGAGTGCCTTACCTGTACAAGACACTGAAAACCAT | + |
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Preference number: 6 (lower is better) Translates to: NTEAMKKGMLTT*SALPVQDTENH Trigger: ATGGTTTTCAGTGTCTTGTACAGGTAAGGCACTCAATGTTGTTAACATGCCCTTTTTCATTGCCTCAGTATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000479135.5 ENST00000483415.5 |
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| CDS CAA 72 bp | TTCATTAGCACCTTGCTGTGTGTGATGTTAGAAAGTTaGGGGGTTCAACAAATGAAAACACCTAAAGGATTA | + |
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Preference number: 6 (lower is better) Translates to: FISTLLCVMLES*GVQQMKTPKGL Trigger: TAATCCTTTAGGTGTTTTCATTTGTTGAACCCCCAAACTTTCTAACATCACACACAGCAAGGTGCTAATGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000485037.5 |
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| CDS CAA 90 bp | AAGATGACATTTCCATGTTTTAGAAGATGGCTTGAGCTCAACAGATaGTCCATGGAAATGCAGAAATTAATTTCTTATGTCTTTCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: KMTFPCFRRWLELNR*SMEMQKLISYVFQS Trigger: GGACTGAAAGACATAAGAAATTAATTTCTGCATTTCCATGGACAATCTGTTGAGCTCAAGCCATCTTCTAAAACATGGAAATGTCATCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000479135.5 ENST00000483415.5 |
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| CDS CAA 72 bp | TTACAGAAGCAGTTACTCAATACTTCAAGTTACCCTTaGTTTTGTAACCATAGGTTAACCTTATTAACCCCT | + |
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Preference number: 6 (lower is better) Translates to: LQKQLLNTSSYP*FCNHRLTLLTP Trigger: AGGGGTTAATAAGGTTAACCTATGGTTACAAAACAAAGGGTAACTTGAAGTATTGAGTAACTGCTTCTGTAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000469669.5 |
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