RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EVX1 (Homo sapiens)

Ensembl gene IDs: ENSG00000106038

Ensembl transcript IDs: ENST00000222761.7, ENST00000496902.7, ENST00000518886.1, ENST00000580535.1

Found 311 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCTGCGACAGCACGCGGAACGTGTCGAGCGGGCGCAGCGAGCCGCTaGAGGGCGAGGCGGCGGCGGAGGCGGCGGATGCGGCGCCCAGGC +
Preference number: 1 (lower is better)
Translates to: AATARGTCRAGAASR*RARRRRRRRMRRPG
Trigger: GCCTGGGCGCCGCATCCGCCGCCTCCGCCGCCGCCTCGCCCTTCAGCGGCTCGCTGCGCCCGCTCGACACGTTCCGCGTGCTGTCGCAGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000580535.1
3UTR GCA 90 bp GCGCAGCGAGCCGCTGAAGGGCGAGGCGGCGGCGGAGGCGGCGGATaGGGCGCCCAGGCCCACCGGCGAGTAGTAGGGCAGGGGCAGGTG +
Preference number: 1 (lower is better)
Translates to: AQRAAEGRGGGGGGG*GAQAHRRVVGQGQV
Trigger: CACCTGCCCCTGCCCTACTACTCGCCGGTGGGCCTGGGCGCCGCATCCGCCGCCTCCGCCGCCGCCTCGCCCTTCAGCGGCTCGCTGCGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000580535.1
3UTR CCA 90 bp GAGTGTGGGAGTGAGGATTTGGGAGTGGCTCTAAACAAACCCTGGTaGAGGCCACAGACAGGGTCCCCAAAAGGGACAGAAGGCTCCCAC +
Preference number: 1 (lower is better)
Translates to: ECGSEDLGVALNKPW*RPQTGSPKGTEGSH
Trigger: GTGGGAGCCTTCTGTCCCTTTTGGGGACCCTGTCTGTGGCCTCCACCAGGGTTTGTTTAGAGCCACTCCCAAATCCTCACTCCCACACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496902.7
3UTR GCA 90 bp AATGAGGAAAGAGATCAGGTGCTGGCAGACGCCAGACCCAGAAGATaGTGTGTAGTCGAGGCTCCAGGTCCCATGCCAAGGGGCTGGATT +
Preference number: 1 (lower is better)
Translates to: NEERDQVLADARPRR*CVVEAPGPMPRGWI
Trigger: AATCCAGCCCCTTGGCATGGGACCTGGAGCCTCGACTACACAGCATCTTCTGGGTCTGGCGTCTGCCAGCACCTGATCTCTTTCCTCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
3UTR TCA 90 bp ATGAAAATTGCCTCTAATTTACCGCCAGATACCGAGAGAGGGAGGTaGAGTTCCCACTCCCTAAGCTCTTCCCTGGGCGCCTTGTTAACA +
Preference number: 1 (lower is better)
Translates to: MKIASNLPPDTERGR*SSHSLSSSLGALLT
Trigger: TGTTAACAAGGCGCCCAGGGAAGAGCTTAGGGAGTGGGAACTTCACCTCCCTCTCTCGGTATCTGGCGGTAAATTAGAGGCAATTTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496902.7
3UTR GCA 90 bp AGCTTGCATTGGGGTTACACGTTCTCCTCTTCCTCAAAAACTGGCTaGAAGGATGAGTGTGGGAGTGAGGATTTGGGAGTGGCTCTAAAC +
Preference number: 1 (lower is better)
Translates to: SLHWGYTFSSSSKTG*KDECGSEDLGVALN
Trigger: GTTTAGAGCCACTCCCAAATCCTCACTCCCACACTCATCCTTGCAGCCAGTTTTTGAGGAAGAGGAGAACGTGTAACCCCAATGCAAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496902.7
3UTR GCA 90 bp TGTCATGCCTTGGAAAAGCTGGCAAAGATTAATCTCTACCTGCTCTaGATACACAGCATTTTGTTCAGAGAGACAGCAATTTCCCTTTCC +
Preference number: 1 (lower is better)
Translates to: CHALEKLAKINLYLL*IHSILFRETAISLS
Trigger: GGAAAGGGAAATTGCTGTCTCTCTGAACAAAATGCTGTGTATGCAGAGCAGGTAGAGATTAATCTTTGCCAGCTTTTCCAAGGCATGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
3UTR-3UTR CCA 90 bp GGGGCGCCAGCCCGTTGGCCGGGCCGCTGTGACAGGCGAGGCAGGAGCAGGGGCGCGGCCGGATCCCGCTaGTCCTTTTCCGCCCTCTCC +
Preference number: 2 (lower is better)
Translates to: GAPARWPGRCDRRGRSRGAAGSR*SFSALS
Trigger: GGAGAGGGCGGAAAAGGACCAGCGGGATCCGGCCGC...GCCCCTGCTCCTGCCTCGCCTGTCACAGCGGCCCGGCCAACGGGCTGGCGCCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000580535.1
3UTR-3UTR CCA 90 bp CAGTTCGGGCCGCGGGTAGGGCTGCGACAGCACGCGGAACGTGTCGAGCGGGCGAGCGAGGAGCGAGGCTaGCTGAGTCCCGGGGCCGGG +
Preference number: 2 (lower is better)
Translates to: QFGPRVGLRQHAERVERASEERG*LSPGAG
Trigger: CCCGGCCCCGGGACTCAGCCAGCCTCGCTCCTCGCT...CGCCCGCTCGACACGTTCCGCGTGCTGTCGCAGCCCTACCCGCGGCCCGAACTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580535.1
3UTR-3UTR GCA 90 bp GTGGCGGAAGGCGCACAGCAGTTCGGGCCGCGGGTAGGGCTGCGACAGCACGCGGGTGGGTCCGGAGGCTaGCCCGGAGGAAGGTCTCTC +
Preference number: 2 (lower is better)
Translates to: VAEGAQQFGPRVGLRQHAGGSGG*PGGRSL
Trigger: GAGAGACCTTCCTCCGGGGCAGCCTCCGGACCCACC...CGCGTGCTGTCGCAGCCCTACCCGCGGCCCGAACTGCTGTGCGCCTTCCGCCAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580535.1
3UTR-3UTR CCA 90 bp AGCGCGACGGAGGAGGCCTTGCTGAGCACCGAGGGCGCGAAGGTGAGGAAGGAGCAGCCTCGACCCTGGTaGGGGGCGGTGGGTCCGGAG +
Preference number: 2 (lower is better)
Translates to: SATEEALLSTEGAKVRKEQPRPW*GAVGPE
Trigger: CTCCGGACCCACCGCCCCCCACCAGGGTCGAGGCTG...CTCCTTCCTCACCTTCGCGCCCTCGGTGCTCAGCAAGGCCTCCTCCGTCGCGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580535.1
3UTR CAA 90 bp GTGAGGGGCACCTCCTCCCTCTGGTCCAGCGCGACGGAGGAGGCCTaGCTGAGCACCGAGGGCGCGAAGGTGAGGAAGGAGTCCGAGCGG +
Preference number: 2 (lower is better)
Translates to: VRGTSSLWSSATEEA*LSTEGAKVRKESER
Trigger: CCGCTCGGACTCCTTCCTCACCTTCGCGCCCTCGGTGCTCAGCAAGGCCTCCTCCGTCGCGCTGGACCAGAGGGAGGAGGTGCCCCTCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000580535.1
3UTR-3UTR TCA 90 bp GGCCTTGCTGAGCACCGAGGGCGCGAAGGTGAGGAAGGAGTCCGAGCGGGAGGTTTGGCCGGGCCGCTGTaGCAGGCGAGGCAGGAGCAG +
Preference number: 2 (lower is better)
Translates to: GLAEHRGREGEEGVRAGGLAGPL*QARQEQ
Trigger: CTGCTCCTGCCTCGCCTGTCACAGCGGCCCGGCCAA...ACCTCCCGCTCGGACTCCTTCCTCACCTTCGCGCCCTCGGTGCTCAGCAAGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000580535.1
3UTR-3UTR TCA 90 bp CAGCGCGACGGAGGAGGCCTTGCTGAGCACCGAGGGCGCGAAGGTGAGGAAGGAAGGTGGAGGCACAGGTaGAGTCCGAGGCGGCGGCAG +
Preference number: 2 (lower is better)
Translates to: QRDGGGLAEHRGREGEEGRWRHR*SPRRRQ
Trigger: CTGCCGCCGCCTCGGACTTCACCTGTGCCTCCACCT...TCCTTCCTCACCTTCGCGCCCTCGGTGCTCAGCAAGGCCTCCTCCGTCGCGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000580535.1
3UTR-3UTR GCA 90 bp CAGCGCGACGGAGGAGGCCTTGCTGAGCACCGAGGGCGCGAAGGTGAGGAAGGACCCTATCCCCACTCCTaGTCCCCAAACGCGCCAGCC +
Preference number: 2 (lower is better)
Translates to: QRDGGGLAEHRGREGEEGPYPHS*SPNAPA
Trigger: GGCTGGCGCGTTTGGGGAGCAGGAGTGGGGATAGGG...TCCTTCCTCACCTTCGCGCCCTCGGTGCTCAGCAAGGCCTCCTCCGTCGCGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580535.1
3UTR-3UTR TCA 90 bp GTGGCGGAAGGCGCACAGCAGTTCGGGCCGCGGGTAGGGCTGCGACAGCACGCGTCTGGAACCACACCTTaGTGGTGGTTTCCGGCAGGT +
Preference number: 2 (lower is better)
Translates to: VAEGAQQFGPRVGLRQHASGTTP*WWFPAG
Trigger: ACCTGCCGGAAACCACCATCAAGGTGTGGTTCCAGA...CGCGTGCTGTCGCAGCCCTACCCGCGGCCCGAACTGCTGTGCGCCTTCCGCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000580535.1
3UTR-3UTR CCA 90 bp GTCGAGGCTCCAGGTCCCATGCCAAGGGGCTGGATTCTCCCTGGTAGTAAATCAACCCCACGGGCGTCATaGAGCCGGCAGCCAGCCGGC +
Preference number: 2 (lower is better)
Translates to: VEAPGPMPRGWILPGSKSTPRAS*SRQPAG
Trigger: GCCGGCTGGCTGCCGGCTCCATGACGCCCGTGGGGT...TGATTTACTACCAGGGAGAATCCAGCCCCTTGGCATGGGACCTGGAGCCTCGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
3UTR-3UTR TCA 90 bp GAGGAGGCCTTGCTGAGCACCGAGGGCGCGAAGGTGAGGAAGGAGTCCGAGCGGTCTGGAACCACACCTTaGTGGTGGTTTCCGGCAGGT +
Preference number: 2 (lower is better)
Translates to: EEALLSTEGAKVRKESERSGTTP*WWFPAG
Trigger: ACCTGCCGGAAACCACCATCAAGGTGTGGTTCCAGA...CCGCTCGGACTCCTTCCTCACCTTCGCGCCCTCGGTGCTCAGCAAGGCCTCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000580535.1
3UTR-3UTR GCA 90 bp AGCGCGACGGAGGAGGCCTTGCTGAGCACCGAGGGCGCGAAGGTGAGGAAGGAGAGGTCTCTCAAGCTCTaGTTCCCTATCCCCACTCCT +
Preference number: 2 (lower is better)
Translates to: SATEEALLSTEGAKVRKERSLKL*FPIPTP
Trigger: AGGAGTGGGGATAGGGAAGCAGAGCTTGAGAGACCT...CTCCTTCCTCACCTTCGCGCCCTCGGTGCTCAGCAAGGCCTCCTCCGTCGCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580535.1
3UTR-3UTR GCA 90 bp GGCCTTGCTGAGCACCGAGGGCGCGAAGGTGAGGAAGGAGTCCGAGCGGGAGGTAATTTCCCTTTCCAGTaGTTGGGCCTTGGCTGGGGA +
Preference number: 2 (lower is better)
Translates to: GLAEHRGREGEEGVRAGGNFPFQ*LGLGWG
Trigger: TCCCCAGCCAAGGCCCAAGCACTGGAAAGGGAAATT...ACCTCCCGCTCGGACTCCTTCCTCACCTTCGCGCCCTCGGTGCTCAGCAAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580535.1
3UTR-3UTR CCA 90 bp GCCATCCACCAGCCCCTTGTCATGCCTTGGAAAAGCTGGCAAAGATTAATCTCTACCCCACGGGCGTCATaGAGCCGGCAGCCAGCCGGC +
Preference number: 2 (lower is better)
Translates to: AIHQPLVMPWKSWQRLISTPRAS*SRQPAG
Trigger: GCCGGCTGGCTGCCGGCTCCATGACGCCCGTGGGGT...AGAGATTAATCTTTGCCAGCTTTTCCAAGGCATGACAAGGGGCTGGTGGATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
3UTR-3UTR TCA 90 bp GGTGCTGGCAGACGCCAGACCCAGAAGATGCTGTGTAGTCGAGGCTCCAGGTCCGCTCCCACTGGTATCTaGAAGTCAAGCTCCAGTGGT +
Preference number: 2 (lower is better)
Translates to: GAGRRQTQKMLCSRGSRSAPTGI*KSSSSG
Trigger: ACCACTGGAGCTTGACTTTCAGATACCAGTGGGAGC...GGACCTGGAGCCTCGACTACACAGCATCTTCTGGGTCTGGCGTCTGCCAGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496902.7
3UTR-3UTR CCA 90 bp TTGGTTGCTGTTGCTGCTAAGTTTTGTTTAGCTTTGGAGCTACAGCCTCGACCCAGCGAGGAGCGAGGCTaGCTGAGTCCCGGGGCCGGG +
Preference number: 2 (lower is better)
Translates to: LVAVAAKFCLALELQPRPSEERG*LSPGAG
Trigger: CCCGGCCCCGGGACTCAGCCAGCCTCGCTCCTCGCT...GGGTCGAGGCTGTAGCTCCAAAGCTAAACAAAACTTAGCAGCAACAGCAACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
3UTR-3UTR CCA 90 bp TTGGTTGCTGTTGCTGCTAAGTTTTGTTTAGCTTTGGAGCTACAGCCTCGACCCCAGCCTCGACCCTGGTaGGGGGCGGTGGGTCCGGAG +
Preference number: 2 (lower is better)
Translates to: LVAVAAKFCLALELQPRPQPRPW*GAVGPE
Trigger: CTCCGGACCCACCGCCCCCCACCAGGGTCGAGGCTG...GGGTCGAGGCTGTAGCTCCAAAGCTAAACAAAACTTAGCAGCAACAGCAACCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
3UTR-3UTR CCA 90 bp GACGCCAGACCCAGAAGATGCTGTGTAGTCGAGGCTCCAGGTCCCATGCCAAGGGAGGGGCCGAGGGACTaGATATTGGTTGCTGTTGCT +
Preference number: 2 (lower is better)
Translates to: DARPRRCCVVEAPGPMPREGPRD*ILVAVA
Trigger: AGCAACAGCAACCAATATCCAGTCCCTCGGCCCCTC...CCTTGGCATGGGACCTGGAGCCTCGACTACACAGCATCTTCTGGGTCTGGCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
3UTR-3UTR GCA 90 bp CTCTGGTCCAGCGCGACGGAGGAGGCCTTGCTGAGCACCGAGGGCGCGAAGGTGAATCTCTACCTGCTCTaGATACACAGCATTTTGTTC +
Preference number: 2 (lower is better)
Translates to: LWSSATEEALLSTEGAKVNLYLL*IHSILF
Trigger: GAACAAAATGCTGTGTATGCAGAGCAGGTAGAGATT...CACCTTCGCGCCCTCGGTGCTCAGCAAGGCCTCCTCCGTCGCGCTGGACCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580535.1
3UTR-3UTR CCA 90 bp AGGCTCCCACTGGTATCTGAAAGTCAAGCTCCAGTGGTAGCTTGGGAAGAAAATGCGGCCGGATCCCGCTaGTCCTTTTCCGCCCTCTCC +
Preference number: 2 (lower is better)
Translates to: RLPLVSESQAPVVAWEENAAGSR*SFSALS
Trigger: GGAGAGGGCGGAAAAGGACCAGCGGGATCCGGCCGC...ATTTTCTTCCCAAGCTACCACTGGAGCTTGACTTTCAGATACCAGTGGGAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496902.7
3UTR-3UTR CCA 90 bp AAGAACCACTCCCTCTCAGTCAGGGTGAAGCTTGCATTGGGGTTACACGTTCTCTCCCTTTCCAGTGCTTaGGCCTTGGCTGGGGAGAGG +
Preference number: 2 (lower is better)
Translates to: KNHSLSVRVKLALGLHVLSLSSA*ALAGER
Trigger: CCTCTCCCCAGCCAAGGCCCAAGCACTGGAAAGGGA...GAGAACGTGTAACCCCAATGCAAGCTTCACCCTGACTGAGAGGGAGTGGTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496902.7
3UTR-3UTR GCA 90 bp AAGTTCCCACTCCCTAAGCTCTTCCCTGGGCGCCTTGTTAACAGCTCAGCTCTGAATTTCCCTTTCCAGTaGTTGGGCCTTGGCTGGGGA +
Preference number: 2 (lower is better)
Translates to: KFPLPKLFPGRLVNSSALNFPFQ*LGLGWG
Trigger: TCCCCAGCCAAGGCCCAAGCACTGGAAAGGGAAATT...CAGAGCTGAGCTGTTAACAAGGCGCCCAGGGAAGAGCTTAGGGAGTGGGAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496902.7
3UTR-3UTR GCA 90 bp GTCGAGGCTCCAGGTCCCATGCCAAGGGGCTGGATTCTCCCTGGTAGTAAATCAACCAGCCCCTTGTCATaGCTTGGAAAAGCTGGCAAA +
Preference number: 2 (lower is better)
Translates to: VEAPGPMPRGWILPGSKSTSPLS*LGKAGK
Trigger: TTTGCCAGCTTTTCCAAGGCATGACAAGGGGCTGGT...TGATTTACTACCAGGGAGAATCCAGCCCCTTGGCATGGGACCTGGAGCCTCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
3UTR-3UTR GCA 90 bp GTTGCTGCTAAGTTTTGTTTAGCTTTGGAGCTACAGCCTCGACCCTGGTGGGGGGCCAGACCCAGAAGATaGTGTGTAGTCGAGGCTCCA +
Preference number: 2 (lower is better)
Translates to: VAAKFCLALELQPRPWWGARPRR*CVVEAP
Trigger: TGGAGCCTCGACTACACAGCATCTTCTGGGTCTGGC...CCCCCACCAGGGTCGAGGCTGTAGCTCCAAAGCTAAACAAAACTTAGCAGCAAC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
3UTR-3UTR CCA 90 bp CCCCTTGTCATGCCTTGGAAAAGCTGGCAAAGATTAATCTCTACCTGCTCTGCACTCTCCTTTCCCCCTTaGCGTCCTAGGGGCGAGGAG +
Preference number: 2 (lower is better)
Translates to: PLVMPWKSWQRLISTCSALSFPP*RPRGEE
Trigger: CTCCTCGCCCCTAGGACGCCAAGGGGGAAAGGAGAG...TGCAGAGCAGGTAGAGATTAATCTTTGCCAGCTTTTCCAAGGCATGACAAGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
3UTR-3UTR GCA 90 bp CCAGCCCCTTGTCATGCCTTGGAAAAGCTGGCAAAGATTAATCTCTACCTGCTCAGGCTTTCCAATTCTTaGGGCCGGATCCCGCTGGTC +
Preference number: 2 (lower is better)
Translates to: PAPCHALEKLAKINLYLLRLSNS*GRIPLV
Trigger: GACCAGCGGGATCCGGCCGCAAGAATTGGAAAGCCT...GAGCAGGTAGAGATTAATCTTTGCCAGCTTTTCCAAGGCATGACAAGGGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
3UTR-3UTR CCA 90 bp GTATGTTGCCATCCACCAGCCCCTTGTCATGCCTTGGAAAAGCTGGCAAAGATTGGGGGCAGGGAGAGATaGAGCCGCAAGTTGAGAAGT +
Preference number: 2 (lower is better)
Translates to: VCCHPPAPCHALEKLAKIGGRER*SRKLRS
Trigger: ACTTCTCAACTTGCGGCTCCATCTCTCCCTGCCCCC...AATCTTTGCCAGCTTTTCCAAGGCATGACAAGGGGCTGGTGGATGGCAACATAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
3UTR-3UTR TCA 90 bp GTTGCTGCTAAGTTTTGTTTAGCTTTGGAGCTACAGCCTCGACCCTGGTGGGGGTCACAAAGCTGGGAATaGGGAAAGAGATCAGGTGCT +
Preference number: 2 (lower is better)
Translates to: VAAKFCLALELQPRPWWGSQSWE*GKRSGA
Trigger: AGCACCTGATCTCTTTCCTCATTCCCAGCTTTGTGA...CCCCCACCAGGGTCGAGGCTGTAGCTCCAAAGCTAAACAAAACTTAGCAGCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
3UTR-3UTR TCA 90 bp CCCCTTGTCATGCCTTGGAAAAGCTGGCAAAGATTAATCTCTACCTGCTCTGCAGATGGAGCCGCAAGTTaGGAAGTGTCACAAAGCTGG +
Preference number: 2 (lower is better)
Translates to: PLVMPWKSWQRLISTCSADGAAS*EVSQSW
Trigger: CCAGCTTTGTGACACTTCTCAACTTGCGGCTCCATC...TGCAGAGCAGGTAGAGATTAATCTTTGCCAGCTTTTCCAAGGCATGACAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
3UTR-3UTR GCA 90 bp CCCCTTGTCATGCCTTGGAAAAGCTGGCAAAGATTAATCTCTACCTGCTCTGCAAGGTCTCTCAAGCTCTaGTTCCCTATCCCCACTCCT +
Preference number: 2 (lower is better)
Translates to: PLVMPWKSWQRLISTCSARSLKL*FPIPTP
Trigger: AGGAGTGGGGATAGGGAAGCAGAGCTTGAGAGACCT...TGCAGAGCAGGTAGAGATTAATCTTTGCCAGCTTTTCCAAGGCATGACAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
3UTR-3UTR CCA 90 bp ATGCCTTGGAAAAGCTGGCAAAGATTAATCTCTACCTGCTCTGCATACACAGCACCCATGCCAAGGGGCTaGATTCTCCCTGGTAGTAAA +
Preference number: 2 (lower is better)
Translates to: MPWKSWQRLISTCSAYTAPMPRG*ILPGSK
Trigger: TTTACTACCAGGGAGAATCCAGCCCCTTGGCATGGG...TGCTGTGTATGCAGAGCAGGTAGAGATTAATCTTTGCCAGCTTTTCCAAGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
3UTR-3UTR TCA 90 bp CAAATCAAACCAAATTCATTCCCTACAGGAAGAACCACTCCCTCTCAGTCAGGGACTCTCTCCTCCAAATaGCTGGTATGTTGCCATCCA +
Preference number: 2 (lower is better)
Translates to: QIKPNSFPTGRTTPSQSGTLSSK*LVCCHP
Trigger: TGGATGGCAACATACCAGTCATTTGGAGGAGAGAGT...CCCTGACTGAGAGGGAGTGGTTCTTCCTGTAGGGAATGAATTTGGTTTGATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496902.7
3UTR-3UTR GCA 90 bp AAGAACCACTCCCTCTCAGTCAGGGTGAAGCTTGCATTGGGGTTACACGTTCTCAATCTCTACCTGCTCTaGATACACAGCATTTTGTTC +
Preference number: 2 (lower is better)
Translates to: KNHSLSVRVKLALGLHVLNLYLL*IHSILF
Trigger: GAACAAAATGCTGTGTATGCAGAGCAGGTAGAGATT...GAGAACGTGTAACCCCAATGCAAGCTTCACCCTGACTGAGAGGGAGTGGTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496902.7
3UTR-3UTR CCA 90 bp GACAGAAGGCTCCCACTGGTATCTGAAAGTCAAGCTCCAGTGGTAGCTTGGGAAATGCCTTGGAAAAGCTaGCAAAGATTAATCTCTACC +
Preference number: 2 (lower is better)
Translates to: DRRLPLVSESQAPVVAWEMPWKS*QRLIST
Trigger: GGTAGAGATTAATCTTTGCCAGCTTTTCCAAGGCAT...TTCCCAAGCTACCACTGGAGCTTGACTTTCAGATACCAGTGGGAGCCTTCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496902.7
3UTR CAA 90 bp AAGCTGGCAAAGATTAATCTCTACCTGCTCTGCATACACAGCATTTaGTTCAGAGAGACAGCAATTTCCCTTTCCAGTGCTTGGGCCTTG +
Preference number: 2 (lower is better)
Translates to: KLAKINLYLLCIHSI*FRETAISLSSAWAL
Trigger: CAAGGCCCAAGCACTGGAAAGGGAAATTGCTGTCTCTCTGAACAAAATGCTGTGTATGCAGAGCAGGTAGAGATTAATCTTTGCCAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
3UTR-3UTR CCA 90 bp TGTCCAGCTTTTATTGCAATATGGTTAACGAATCATAACAGCAAGTTCTTTGGGGGGGGCAGGGAGAGATaGAGCCGCAAGTTGAGAAGT +
Preference number: 2 (lower is better)
Translates to: CPAFIAIWLTNHNSKFFGGGRER*SRKLRS
Trigger: ACTTCTCAACTTGCGGCTCCATCTCTCCCTGCCCCC...CCCAAAGAACTTGCTGTTATGATTCGTTAACCATATTGCAATAAAAGCTGGACA
46% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000496902.7
3UTR-3UTR GCA 90 bp GTATGTTGCCATCCACCAGCCCCTTGTCATGCCTTGGAAAAGCTGGCAAAGATTAGATTAATCTCTACCTaGTCTGCATACACAGCATTT +
Preference number: 2 (lower is better)
Translates to: VCCHPPAPCHALEKLAKIRLIST*SAYTAF
Trigger: AAATGCTGTGTATGCAGAGCAGGTAGAGATTAATCT...AATCTTTGCCAGCTTTTCCAAGGCATGACAAGGGGCTGGTGGATGGCAACATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
3UTR TCA 72 bp GCACGCGGAACGTGTCGAGCGGGCGCAGCGAGCCGCTaGAGGGCGAGGCGGCGGCGGAGGCGGCGGATGCGG +
Preference number: 3 (lower is better)
Translates to: ARGTCRAGAASR*RARRRRRRRMR
Trigger: CCGCATCCGCCGCCTCCGCCGCCGCCTCGCCCTTCAGCGGCTCGCTGCGCCCGCTCGACACGTTCCGCGTGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000580535.1
3UTR CCA 72 bp AGTCCGAGGCGGCGGCAGCCCGGGGCGCCAGCCCGTTaGCCGGGCCGCTGTGACAGGCGAGGCAGGAGCAGG +
Preference number: 3 (lower is better)
Translates to: SPRRRQPGAPAR*PGRCDRRGRSR
Trigger: CCTGCTCCTGCCTCGCCTGTCACAGCGGCCCGGCCAACGGGCTGGCGCCCCGGGCTGCCGCCGCCTCGGACT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000580535.1
3UTR-3UTR CAA 90 bp GGAGGTGGAGGCACAGGTGAAGTCCGAGGCGGCGGCAGCCCGGGGCGCCAGCCCAAGTTTTGTTTAGCTTaGGAGCTACAGCCTCGACCC +
Preference number: 3 (lower is better)
Translates to: GGGGTGEVRGGGSPGRQPKFCLA*ELQPRP
Trigger: GGGTCGAGGCTGTAGCTCCAAAGCTAAACAAAACTT...GGGCTGGCGCCCCGGGCTGCCGCCGCCTCGGACTTCACCTGTGCCTCCACCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580535.1
3UTR-3UTR CAA 90 bp GGCCTTGCTGAGCACCGAGGGCGCGAAGGTGAGGAAGGAGTCCGAGCGGGAGGTTTCTGGAACCACACCTaGATGGTGGTTTCCGGCAGG +
Preference number: 3 (lower is better)
Translates to: GLAEHRGREGEEGVRAGGFWNHT*MVVSGR
Trigger: CCTGCCGGAAACCACCATCAAGGTGTGGTTCCAGAA...ACCTCCCGCTCGGACTCCTTCCTCACCTTCGCGCCCTCGGTGCTCAGCAAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000580535.1
3UTR GCA 72 bp AGAGATCAGGTGCTGGCAGACGCCAGACCCAGAAGATaGTGTGTAGTCGAGGCTCCAGGTCCCATGCCAAGG +
Preference number: 3 (lower is better)
Translates to: RDQVLADARPRR*CVVEAPGPMPR
Trigger: CCTTGGCATGGGACCTGGAGCCTCGACTACACAGCATCTTCTGGGTCTGGCGTCTGCCAGCACCTGATCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
3UTR CCA 72 bp TTCCTAGGCTTTCCAATTCTTGCGGCCGGATCCCGCTaGTCCTTTTCCGCCCTCTCCTTTCCCCCTTGGCGT +
Preference number: 3 (lower is better)
Translates to: FLGFPILAAGSR*SFSALSFPPWR
Trigger: ACGCCAAGGGGGAAAGGAGAGGGCGGAAAAGGACCAGCGGGATCCGGCCGCAAGAATTGGAAAGCCTAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
3UTR-3UTR CAA 90 bp TTCCTAGGCTTTCCAATTCTTGCGGCCGGATCCCGCTGGTCCTTTTCCGCCCTCTTCTGGAACCACACCTaGATGGTGGTTTCCGGCAGG +
Preference number: 3 (lower is better)
Translates to: FLGFPILAAGSRWSFSALFWNHT*MVVSGR
Trigger: CCTGCCGGAAACCACCATCAAGGTGTGGTTCCAGAA...GAGGGCGGAAAAGGACCAGCGGGATCCGGCCGCAAGAATTGGAAAGCCTAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580535.1
3UTR TCA 72 bp GCCTCTAATTTACCGCCAGATACCGAGAGAGGGAGGTaGAGTTCCCACTCCCTAAGCTCTTCCCTGGGCGCC +
Preference number: 3 (lower is better)
Translates to: ASNLPPDTERGR*SSHSLSSSLGA
Trigger: GGCGCCCAGGGAAGAGCTTAGGGAGTGGGAACTTCACCTCCCTCTCTCGGTATCTGGCGGTAAATTAGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496902.7
3UTR-3UTR CAA 90 bp GCCATCCACCAGCCCCTTGTCATGCCTTGGAAAAGCTGGCAAAGATTAATCTCTTTCCCTTTCCAGTGCTaGGGCCTTGGCTGGGGAGAG +
Preference number: 3 (lower is better)
Translates to: AIHQPLVMPWKSWQRLISFPFQC*GLGWGE
Trigger: CTCTCCCCAGCCAAGGCCCAAGCACTGGAAAGGGAA...AGAGATTAATCTTTGCCAGCTTTTCCAAGGCATGACAAGGGGCTGGTGGATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
3UTR CCA 72 bp TGTGTAGTCGAGGCTCCAGGTCCCATGCCAAGGGGCTaGATTCTCCCTGGTAGTAAATCATCTCTCACTCTC +
Preference number: 3 (lower is better)
Translates to: CVVEAPGPMPRG*ILPGSKSSLTL
Trigger: GAGAGTGAGAGATGATTTACTACCAGGGAGAATCCAGCCCCTTGGCATGGGACCTGGAGCCTCGACTACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
3UTR CCA 72 bp AGTGAGGATTTGGGAGTGGCTCTAAACAAACCCTGGTaGAGGCCACAGACAGGGTCCCCAAAAGGGACAGAA +
Preference number: 3 (lower is better)
Translates to: SEDLGVALNKPW*RPQTGSPKGTE
Trigger: TTCTGTCCCTTTTGGGGACCCTGTCTGTGGCCTCCACCAGGGTTTGTTTAGAGCCACTCCCAAATCCTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496902.7
3UTR-3UTR CAA 90 bp AAGAACCACTCCCTCTCAGTCAGGGTGAAGCTTGCATTGGGGTTACACGTTCTCCCATCCACCAGCCCCTaGTCATGCCTTGGAAAAGCT +
Preference number: 3 (lower is better)
Translates to: KNHSLSVRVKLALGLHVLPSTSP*SCLGKA
Trigger: AGCTTTTCCAAGGCATGACAAGGGGCTGGTGGATGG...GAGAACGTGTAACCCCAATGCAAGCTTCACCCTGACTGAGAGGGAGTGGTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000496902.7
3UTR TCA 72 bp TTCCCTACAGGAAGAACCACTCCCTCTCAGTCAGGGTaGAGCTTGCATTGGGGTTACACGTTCTCCTCTTCC +
Preference number: 3 (lower is better)
Translates to: FPTGRTTPSQSG*SLHWGYTFSSS
Trigger: GGAAGAGGAGAACGTGTAACCCCAATGCAAGCTTCACCCTGACTGAGAGGGAGTGGTTCTTCCTGTAGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496902.7
3UTR-3UTR CAA 90 bp ATGCCTTGGAAAAGCTGGCAAAGATTAATCTCTACCTGCTCTGCATACACAGCATTCCCTTTCCAGTGCTaGGGCCTTGGCTGGGGAGAG +
Preference number: 3 (lower is better)
Translates to: MPWKSWQRLISTCSAYTAFPFQC*GLGWGE
Trigger: CTCTCCCCAGCCAAGGCCCAAGCACTGGAAAGGGAA...TGCTGTGTATGCAGAGCAGGTAGAGATTAATCTTTGCCAGCTTTTCCAAGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
3UTR-3UTR CAA 90 bp GTATGTTGCCATCCACCAGCCCCTTGTCATGCCTTGGAAAAGCTGGCAAAGATTCAAATGACTGGTATGTaGCCATCCACCAGCCCCTTG +
Preference number: 3 (lower is better)
Translates to: VCCHPPAPCHALEKLAKIQMTGM*PSTSPL
Trigger: CAAGGGGCTGGTGGATGGCAACATACCAGTCATTTG...AATCTTTGCCAGCTTTTCCAAGGCATGACAAGGGGCTGGTGGATGGCAACATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
3UTR-3UTR CAA 90 bp CAAATCAAACCAAATTCATTCCCTACAGGAAGAACCACTCCCTCTCAGTCAGGGTCTTCCCTGGGCGCCTaGTTAACAGCTCAGCTCTGG +
Preference number: 3 (lower is better)
Translates to: QIKPNSFPTGRTTPSQSGSSLGA*LTAQLW
Trigger: CCAGAGCTGAGCTGTTAACAAGGCGCCCAGGGAAGA...CCCTGACTGAGAGGGAGTGGTTCTTCCTGTAGGGAATGAATTTGGTTTGATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496902.7
3UTR TCA 72 bp GGTCCCCAAAAGGGACAGAAGGCTCCCACTGGTATCTaGAAGTCAAGCTCCAGTGGTAGCTTGGGAAGAAAA +
Preference number: 3 (lower is better)
Translates to: GPQKGQKAPTGI*KSSSSGSLGRK
Trigger: TTTTCTTCCCAAGCTACCACTGGAGCTTGACTTTCAGATACCAGTGGGAGCCTTCTGTCCCTTTTGGGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496902.7
3UTR-3UTR CAA 90 bp GTAGTCGAGGCTCCAGGTCCCATGCCAAGGGGCTGGATTCTCCCTGGTAGTAAATGCATACACAGCATTTaGTTCAGAGAGACAGCAATT +
Preference number: 3 (lower is better)
Translates to: VVEAPGPMPRGWILPGSKCIHSI*FRETAI
Trigger: AATTGCTGTCTCTCTGAACAAAATGCTGTGTATGCA...TTTACTACCAGGGAGAATCCAGCCCCTTGGCATGGGACCTGGAGCCTCGACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
3UTR GCA 72 bp CAGGAAGAACCACTCCCTCTCAGTCAGGGTGAAGCTTaGATTGGGGTTACACGTTCTCCTCTTCCTCAAAAA +
Preference number: 3 (lower is better)
Translates to: QEEPLPLSQGEA*IGVTRSPLPQK
Trigger: TTTTTGAGGAAGAGGAGAACGTGTAACCCCAATGCAAGCTTCACCCTGACTGAGAGGGAGTGGTTCTTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496902.7
3UTR CCA 72 bp GCCATCCACCAGCCCCTTGTCATGCCTTGGAAAAGCTaGCAAAGATTAATCTCTACCTGCTCTGCATACACA +
Preference number: 3 (lower is better)
Translates to: AIHQPLVMPWKS*QRLISTCSAYT
Trigger: TGTGTATGCAGAGCAGGTAGAGATTAATCTTTGCCAGCTTTTCCAAGGCATGACAAGGGGCTGGTGGATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
3UTR-3UTR CAA 90 bp GCCATCCACCAGCCCCTTGTCATGCCTTGGAAAAGCTGGCAAAGATTAATCTCTAAGTTTTGTTTAGCTTaGGAGCTACAGCCTCGACCC +
Preference number: 3 (lower is better)
Translates to: AIHQPLVMPWKSWQRLISKFCLA*ELQPRP
Trigger: GGGTCGAGGCTGTAGCTCCAAAGCTAAACAAAACTT...AGAGATTAATCTTTGCCAGCTTTTCCAAGGCATGACAAGGGGCTGGTGGATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
3UTR CCA 72 bp TGGTATGTTGCCATCCACCAGCCCCTTGTCATGCCTTaGAAAAGCTGGCAAAGATTAATCTCTACCTGCTCT +
Preference number: 3 (lower is better)
Translates to: WYVAIHQPLVMP*KSWQRLISTCS
Trigger: AGAGCAGGTAGAGATTAATCTTTGCCAGCTTTTCCAAGGCATGACAAGGGGCTGGTGGATGGCAACATACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
3UTR-3UTR CAA 90 bp CAAATCAAACCAAATTCATTCCCTACAGGAAGAACCACTCCCTCTCAGTCAGGGGGGACTGGATATTGGTaGCTGTTGCTGCTAAGTTTT +
Preference number: 3 (lower is better)
Translates to: QIKPNSFPTGRTTPSQSGGTGYW*LLLLSF
Trigger: AAAACTTAGCAGCAACAGCAACCAATATCCAGTCCC...CCCTGACTGAGAGGGAGTGGTTCTTCCTGTAGGGAATGAATTTGGTTTGATTTG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000496902.7
3UTR TCA 72 bp TACCCAATGCAAAGGGTAGGGCCAGAAAGTTCCTGGTaGAGTGAAGGTGAACAAGCAAAGGATGAAAATTGC +
Preference number: 3 (lower is better)
Translates to: YPMQRVGPESSW*SEGEQAKDENC
Trigger: GCAATTTTCATCCTTTGCTTGTTCACCTTCACTTCACCAGGAACTTTCTGGCCCTACCCTTTGCATTGGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496902.7
3UTR GCA 72 bp ATGCCTTGGAAAAGCTGGCAAAGATTAATCTCTACCTaGTCTGCATACACAGCATTTTGTTCAGAGAGACAG +
Preference number: 3 (lower is better)
Translates to: MPWKSWQRLIST*SAYTAFCSERQ
Trigger: CTGTCTCTCTGAACAAAATGCTGTGTATGCAGAGCAGGTAGAGATTAATCTTTGCCAGCTTTTCCAAGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS-3UTR CCA 90 bp CAGCCCGGGGCGCCAGCCCGTTGGCCGGGCCGCTGTGACAGGCGAGGCAGGAGCTGCTGGAGCGCGGTCTaGACCGCGACCGCGGCGGTG +
Preference number: 4 (lower is better)
Translates to: QPGAPARWPGRCDRRGRSCWSAV*TATAAV
Trigger: CACCGCCGCGGTCGCGGTCCAGACCGCGCTCCAGCA...GCTCCTGCCTCGCCTGTCACAGCGGCCCGGCCAACGGGCTGGCGCCCCGGGCTG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222761.7
CDS-3UTR TCA 90 bp CAGCCCGGGGCGCCAGCCCGTTGGCCGGGCCGCTGTGACAGGCGAGGCAGGAGCCGGAGGAGGCCTTGCTaGGCACCGAGGGCGCGAAGG +
Preference number: 4 (lower is better)
Translates to: QPGAPARWPGRCDRRGRSRRRPC*APRARR
Trigger: CCTTCGCGCCCTCGGTGCTCAGCAAGGCCTCCTCCG...GCTCCTGCCTCGCCTGTCACAGCGGCCCGGCCAACGGGCTGGCGCCCCGGGCTG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000580535.1
CDS-3UTR GCA 90 bp CCAGCCCGTTGGCCGGGCCGCTGTGACAGGCGAGGCAGGAGCAGGGGCCGCCGGCCCCGCCGCGCTGCCTaGGAGTCCATCTACCGGCTC +
Preference number: 4 (lower is better)
Translates to: PARWPGRCDRRGRSRGRRPRRAA*ESIYRL
Trigger: GAGCCGGTAGATGGACTCGCAGGCAGCGCGGCGGGG...CCGGCGGCCCCTGCTCCTGCCTCGCCTGTCACAGCGGCCCGGCCAACGGGCTGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222761.7
CDS-3UTR GCA 90 bp GGAGGTGGAGGCACAGGTGAAGTCCGAGGCGGCGGCAGCCCGGGGCGCCAGCCCCGCTGCACGCCAGGGTaGCTTGCGAGCCGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: GGGGTGEVRGGGSPGRQPRCTPG*LASRPH
Trigger: GTGGGGGCGGCTCGCAAGGCACCCTGGCGTGCAGCG...GGGCTGGCGCCCCGGGCTGCCGCCGCCTCGGACTTCACCTGTGCCTCCACCTCC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000580535.1
CDS-3UTR TCA 90 bp CAGCCCGGGGCGCCAGCCCGTTGGCCGGGCCGCTGTGACAGGCGAGGCAGGAGCAGGTGGAGGCACAGGTaGAGTCCGAGGCGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: QPGAPARWPGRCDRRGRSRWRHR*SPRRRQ
Trigger: CTGCCGCCGCCTCGGACTTCACCTGTGCCTCCACCT...GCTCCTGCCTCGCCTGTCACAGCGGCCCGGCCAACGGGCTGGCGCCCCGGGCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000580535.1
CDS-3UTR CCA 90 bp GAGCGGGAGGTGGAGGCACAGGTGAAGTCCGAGGCGGCGGCAGCCCGGGGCGCCGTCCTGGGCCGAGCATaGCCGCCCCAGCTACCTGGG +
Preference number: 4 (lower is better)
Translates to: EREVEAQVKSEAAAARGAVLGRA*PPQLPG
Trigger: CCCAGGTAGCTGGGGCGGCCATGCTCGGCCCAGGAC...GGCGCCCCGGGCTGCCGCCGCCTCGGACTTCACCTGTGCCTCCACCTCCCGCTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222761.7
CDS-3UTR GCA 90 bp CAGTTCGGGCCGCGGGTAGGGCTGCGACAGCACGCGGAACGTGTCGAGCGGGCGCGCTGCACGCCAGGGTaGCTTGCGAGCCGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: QFGPRVGLRQHAERVERARCTPG*LASRPH
Trigger: GTGGGGGCGGCTCGCAAGGCACCCTGGCGTGCAGCG...CGCCCGCTCGACACGTTCCGCGTGCTGTCGCAGCCCTACCCGCGGCCCGAACTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000580535.1
CDS-3UTR TCA 90 bp CCAGCCCGTTGGCCGGGCCGCTGTGACAGGCGAGGCAGGAGCAGGGGCCGCCGGTTACAGTACCGCTGGTaGCGCCACTCGGCGAGCGCA +
Preference number: 4 (lower is better)
Translates to: PARWPGRCDRRGRSRGRRLQYRW*RHSASA
Trigger: TGCGCTCGCCGAGTGGCGTCACCAGCGGTACTGTAA...CCGGCGGCCCCTGCTCCTGCCTCGCCTGTCACAGCGGCCCGGCCAACGGGCTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222761.7
CDS-3UTR TCA 90 bp GTGGCGGAAGGCGCACAGCAGTTCGGGCCGCGGGTAGGGCTGCGACAGCACGCGTTGGCCGGGCCGCTGTaGCAGGCGAGGCAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: VAEGAQQFGPRVGLRQHALAGPL*QARQEQ
Trigger: CTGCTCCTGCCTCGCCTGTCACAGCGGCCCGGCCAA...CGCGTGCTGTCGCAGCCCTACCCGCGGCCCGAACTGCTGTGCGCCTTCCGCCAC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000580535.1
CDS-3UTR GCA 90 bp GTGGCGGAAGGCGCACAGCAGTTCGGGCCGCGGGTAGGGCTGCGACAGCACGCGAGCCGCCCCCACCACTaGCGCCGTTGCTCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: VAEGAQQFGPRVGLRQHASRPHH*RRCSWG
Trigger: CCCCCAAGAGCAACGGCGGCAGTGGTGGGGGCGGCT...CGCGTGCTGTCGCAGCCCTACCCGCGGCCCGAACTGCTGTGCGCCTTCCGCCAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000580535.1
CDS-3UTR GCA 90 bp GTGGCGGAAGGCGCACAGCAGTTCGGGCCGCGGGTAGGGCTGCGACAGCACGCGCACGCCAGGGTGCCTTaGGAGCCGCCCCCACCACTG +
Preference number: 4 (lower is better)
Translates to: VAEGAQQFGPRVGLRQHAHARVP*EPPPPL
Trigger: CAGTGGTGGGGGCGGCTCGCAAGGCACCCTGGCGTG...CGCGTGCTGTCGCAGCCCTACCCGCGGCCCGAACTGCTGTGCGCCTTCCGCCAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000580535.1
CDS-3UTR CCA 90 bp ATGCGGCGCCCAGGCCCACCGGCGAGTAGTAGGGCAGGGGCAGGTGCGATGGGACCGCGACCGCGGCGGTaGCGGTGGGAGCTAGGGTCA +
Preference number: 4 (lower is better)
Translates to: MRRPGPPASSRAGAGAMGPRPRR*RWELGS
Trigger: TGACCCTAGCTCCCACCGCCACCGCCGCGGTCGCGG...TCCCATCGCACCTGCCCCTGCCCTACTACTCGCCGGTGGGCCTGGGCGCCGCAT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222761.7
CDS-3UTR TCA 90 bp ATGCGGCGCCCAGGCCCACCGGCGAGTAGTAGGGCAGGGGCAGGTGCGATGGGATTGGCCGGGCCGCTGTaGCAGGCGAGGCAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: MRRPGPPASSRAGAGAMGLAGPL*QARQEQ
Trigger: CTGCTCCTGCCTCGCCTGTCACAGCGGCCCGGCCAA...TCCCATCGCACCTGCCCCTGCCCTACTACTCGCCGGTGGGCCTGGGCGCCGCAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000580535.1
CDS-3UTR GCA 90 bp CTCTGGTCCAGCGCGACGGAGGAGGCCTTGCTGAGCACCGAGGGCGCGAAGGTGCCGGCCCCGCCGCGCTaGCTGCGAGTCCATCTACCG +
Preference number: 4 (lower is better)
Translates to: LWSSATEEALLSTEGAKVPAPPR*LRVHLP
Trigger: CGGTAGATGGACTCGCAGGCAGCGCGGCGGGGCCGG...CACCTTCGCGCCCTCGGTGCTCAGCAAGGCCTCCTCCGTCGCGCTGGACCAGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222761.7
CDS-3UTR GCA 90 bp CAGTTCGGGCCGCGGGTAGGGCTGCGACAGCACGCGGAACGTGTCGAGCGGGCGGGTGGGTCCGGAGGCTaGCCCGGAGGAAGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: QFGPRVGLRQHAERVERAGGSGG*PGGRSL
Trigger: GAGAGACCTTCCTCCGGGGCAGCCTCCGGACCCACC...CGCCCGCTCGACACGTTCCGCGTGCTGTCGCAGCCCTACCCGCGGCCCGAACTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580535.1
CDS-3UTR TCA 90 bp GGAGGTGGAGGCACAGGTGAAGTCCGAGGCGGCGGCAGCCCGGGGCGCCAGCCCCAATCTGCTCTCGGGTaGAGGCGGTGCGGTAACGAC +
Preference number: 4 (lower is better)
Translates to: GGGGTGEVRGGGSPGRQPQSALG*RRCGND
Trigger: GTCGTTACCGCACCGCCTTCACCCGAGAGCAGATTG...GGGCTGGCGCCCCGGGCTGCCGCCGCCTCGGACTTCACCTGTGCCTCCACCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000580535.1
CDS-3UTR GCA 90 bp CGCCCGCGGCCGCCGCATGGCTCATCATGTAAGTGTAGAAGGCGGGGTCCGCCGGCGAGCGCTCCTCTGTaGCGCACCGCCTCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: RPRPPHGSSCKCRRRGPPASAPL*RTASGR
Trigger: CCTCCCAGAGGCGGTGCGGCACAGAGGAGCGCTCGC...CGGCGGACCCCGCCTTCTACACTTACATGATGAGCCATGCGGCGGCCGCGGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222761.7
CDS-3UTR GCA 90 bp GCCGCGGGTAGGGCTGCGACAGCACGCGGAACGTGTCGAGCGGGCGCAGCGAGCTCCGAGCTACTGGGTTaGCCCTGTCCGGAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: AAGRAATARGTCRAGAASSELLG*PCPERL
Trigger: CAGCCTCTCCGGACAGGGGCAACCCAGTAGCTCGGA...GCTCGCTGCGCCCGCTCGACACGTTCCGCGTGCTGTCGCAGCCCTACCCGCGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222761.7
CDS-3UTR GCA 90 bp GGCGGATGCGGCGCCCAGGCCCACCGGCGAGTAGTAGGGCAGGGGCAGGTGCGATCCAGCCGCGCAATCTaGTCTCGGGTGAAGGCGGTG +
Preference number: 4 (lower is better)
Translates to: GGCGAQAHRRVVGQGQVRSSRAI*SRVKAV
Trigger: CACCGCCTTCACCCGAGAGCAGATTGCGCGGCTGGA...TCGCACCTGCCCCTGCCCTACTACTCGCCGGTGGGCCTGGGCGCCGCATCCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000580535.1
CDS-3UTR CCA 90 bp CTGCGACAGCACGCGGAACGTGTCGAGCGGGCGCAGCGAGCCGCTGAAGGGCGAGTGCCGCACCGCCTCTaGGAGGAAGCCCCATTGCCC +
Preference number: 4 (lower is better)
Translates to: LRQHAERVERAQRAAEGRVPHRL*EEAPLP
Trigger: GGGCAATGGGGCTTCCTCCCAGAGGCGGTGCGGCAC...TCGCCCTTCAGCGGCTCGCTGCGCCCGCTCGACACGTTCCGCGTGCTGTCGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222761.7
CDS-3UTR CCA 90 bp GCAGTTCGGGCCGCGGGTAGGGCTGCGACAGCACGCGGAACGTGTCGAGCGGGCTGCCGCCGTTGCTCTTaGGGGTCTCGCTCCCTCCGT +
Preference number: 4 (lower is better)
Translates to: AVRAAGRAATARGTCRAGCRRCS*GSRSLR
Trigger: ACGGAGGGAGCGAGACCCCCAAGAGCAACGGCGGCA...GCCCGCTCGACACGTTCCGCGTGCTGTCGCAGCCCTACCCGCGGCCCGAACTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000580535.1
CDS-3UTR TCA 90 bp GGCCTTGCTGAGCACCGAGGGCGCGAAGGTGAGGAAGGAGTCCGAGCGGGAGGTCGGAGGAGGCCTTGCTaGGCACCGAGGGCGCGAAGG +
Preference number: 4 (lower is better)
Translates to: GLAEHRGREGEEGVRAGGRRRPC*APRARR
Trigger: CCTTCGCGCCCTCGGTGCTCAGCAAGGCCTCCTCCG...ACCTCCCGCTCGGACTCCTTCCTCACCTTCGCGCCCTCGGTGCTCAGCAAGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000580535.1
CDS-3UTR GCA 90 bp CTGCGACAGCACGCGGAACGTGTCGAGCGGGCGCAGCGAGCCGCTGAAGGGCGAGAAAGAAAGGCCGGGTaGCTGGGAGGGCGCGGAGCT +
Preference number: 4 (lower is better)
Translates to: LRQHAERVERAQRAAEGRERKAG*LGGRGA
Trigger: AGCTCCGCGCCCTCCCAGGCACCCGGCCTTTCTTTC...TCGCCCTTCAGCGGCTCGCTGCGCCCGCTCGACACGTTCCGCGTGCTGTCGCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222761.7
CDS-3UTR GCA 90 bp CTCCTCCCTCTGGTCCAGCGCGACGGAGGAGGCCTTGCTGAGCACCGAGGGCGCCACCACTGCCGCCGTTaGTCTTGGGGGTCTCGCTCC +
Preference number: 4 (lower is better)
Translates to: LLPLVQRDGGGLAEHRGRHHCRR*SWGSRS
Trigger: GGAGCGAGACCCCCAAGAGCAACGGCGGCAGTGGTG...GCGCCCTCGGTGCTCAGCAAGGCCTCCTCCGTCGCGCTGGACCAGAGGGAGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000580535.1
CDS-3UTR CCA 90 bp GAGGAGGCCTTGCTGAGCACCGAGGGCGCGAAGGTGAGGAAGGAGTCCGAGCGGGAAAGGCCGGGTGCCTaGGAGGGCGCGGAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: EEALLSTEGAKVRKESERERPGA*EGAELL
Trigger: CAGCAGCTCCGCGCCCTCCCAGGCACCCGGCCTTTC...CCGCTCGGACTCCTTCCTCACCTTCGCGCCCTCGGTGCTCAGCAAGGCCTCCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222761.7
CDS-3UTR CCA 90 bp CTGCGACAGCACGCGGAACGTGTCGAGCGGGCGCAGCGAGCCGCTGAAGGGCGATGCCGCCGTTGCTCTTaGGGGTCTCGCTCCCTCCGT +
Preference number: 4 (lower is better)
Translates to: LRQHAERVERAQRAAEGRCRRCS*GSRSLR
Trigger: ACGGAGGGAGCGAGACCCCCAAGAGCAACGGCGGCA...TCGCCCTTCAGCGGCTCGCTGCGCCCGCTCGACACGTTCCGCGTGCTGTCGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000580535.1
CDS-3UTR CCA 90 bp CGCCCGCGGCCGCCGCATGGCTCATCATGTAAGTGTAGAAGGCGGGGTCCGCCGGCGGCCGGATCCCGCTaGTCCTTTTCCGCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: RPRPPHGSSCKCRRRGPPAAGSR*SFSALS
Trigger: GGAGAGGGCGGAAAAGGACCAGCGGGATCCGGCCGC...CGGCGGACCCCGCCTTCTACACTTACATGATGAGCCATGCGGCGGCCGCGGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580535.1
CDS-3UTR CCA 90 bp TCCCTATCCCCACTCCTGCTCCCCAAACGCGCCAGCCACCGCCACTTCCTAGGCCAGCCTCGACCCTGGTaGGGGGCGGTGGGTCCGGAG +
Preference number: 4 (lower is better)
Translates to: SLSPLLLPKRASHRHFLGQPRPW*GAVGPE
Trigger: CTCCGGACCCACCGCCCCCCACCAGGGTCGAGGCTG...GCCTAGGAAGTGGCGGTGGCTGGCGCGTTTGGGGAGCAGGAGTGGGGATAGGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS-3UTR TCA 90 bp AGCGCGACGGAGGAGGCCTTGCTGAGCACCGAGGGCGCGAAGGTGAGGAAGGAGAGGTGGAGGCACAGGTaGAGTCCGAGGCGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: SATEEALLSTEGAKVRKERWRHR*SPRRRQ
Trigger: CTGCCGCCGCCTCGGACTTCACCTGTGCCTCCACCT...CTCCTTCCTCACCTTCGCGCCCTCGGTGCTCAGCAAGGCCTCCTCCGTCGCGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000580535.1
CDS-3UTR GCA 90 bp GGCCTTGCTGAGCACCGAGGGCGCGAAGGTGAGGAAGGAGTCCGAGCGGGAGGTTCCCTCCGTTCGGACTaGCGACCAGCGCCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: GLAEHRGREGEEGVRAGGSLRSD*RPAPRS
Trigger: GCTCCGAGGCGCTGGTCGGCAGTCCGAACGGAGGGA...ACCTCCCGCTCGGACTCCTTCCTCACCTTCGCGCCCTCGGTGCTCAGCAAGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000580535.1
CDS-3UTR GCA 90 bp ATGCGGCGCCCAGGCCCACCGGCGAGTAGTAGGGCAGGGGCAGGTGCGATGGGATCCAGCCGCGCAATCTaGTCTCGGGTGAAGGCGGTG +
Preference number: 4 (lower is better)
Translates to: MRRPGPPASSRAGAGAMGSSRAI*SRVKAV
Trigger: CACCGCCTTCACCCGAGAGCAGATTGCGCGGCTGGA...TCCCATCGCACCTGCCCCTGCCCTACTACTCGCCGGTGGGCCTGGGCGCCGCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000580535.1
CDS-3UTR CCA 90 bp CAGCGCGACGGAGGAGGCCTTGCTGAGCACCGAGGGCGCGAAGGTGAGGAAGGACCGCGGCGGTGGCGGTaGGAGCTAGGGTCACCTTGT +
Preference number: 4 (lower is better)
Translates to: QRDGGGLAEHRGREGEEGPRRWR*ELGSPC
Trigger: ACAAGGTGACCCTAGCTCCCACCGCCACCGCCGCGG...TCCTTCCTCACCTTCGCGCCCTCGGTGCTCAGCAAGGCCTCCTCCGTCGCGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222761.7
CDS-3UTR CCA 90 bp ATGCGGCGCCCAGGCCCACCGGCGAGTAGTAGGGCAGGGGCAGGTGCGATGGGACGGTGTCCGAGCTACTaGGTTGCCCCTGTCCGGAGA +
Preference number: 4 (lower is better)
Translates to: MRRPGPPASSRAGAGAMGRCPSY*VAPVRR
Trigger: TCTCCGGACAGGGGCAACCCAGTAGCTCGGACACCG...TCCCATCGCACCTGCCCCTGCCCTACTACTCGCCGGTGGGCCTGGGCGCCGCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000222761.7
CDS-3UTR CCA 90 bp CAGCGCGACGGAGGAGGCCTTGCTGAGCACCGAGGGCGCGAAGGTGAGGAAGGAGGCACCTCCTCCCTCTaGTCCAGCGCGACGGAGGAG +
Preference number: 4 (lower is better)
Translates to: QRDGGGLAEHRGREGEEGGTSSL*SSATEE
Trigger: CTCCTCCGTCGCGCTGGACCAGAGGGAGGAGGTGCC...TCCTTCCTCACCTTCGCGCCCTCGGTGCTCAGCAAGGCCTCCTCCGTCGCGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000580535.1
CDS-3UTR CCA 90 bp ATGCGGCGCCCAGGCCCACCGGCGAGTAGTAGGGCAGGGGCAGGTGCGATGGGACTCTCCTTTCCCCCTTaGCGTCCTAGGGGCGAGGAG +
Preference number: 4 (lower is better)
Translates to: MRRPGPPASSRAGAGAMGLSFPP*RPRGEE
Trigger: CTCCTCGCCCCTAGGACGCCAAGGGGGAAAGGAGAG...TCCCATCGCACCTGCCCCTGCCCTACTACTCGCCGGTGGGCCTGGGCGCCGCAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000580535.1
CDS-3UTR TCA 90 bp GGCGGATGCGGCGCCCAGGCCCACCGGCGAGTAGTAGGGCAGGGGCAGGTGCGATCTGGAACCACACCTTaGTGGTGGTTTCCGGCAGGT +
Preference number: 4 (lower is better)
Translates to: GGCGAQAHRRVVGQGQVRSGTTP*WWFPAG
Trigger: ACCTGCCGGAAACCACCATCAAGGTGTGGTTCCAGA...TCGCACCTGCCCCTGCCCTACTACTCGCCGGTGGGCCTGGGCGCCGCATCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000580535.1
CDS-3UTR GCA 90 bp CAGCCCGGGGCGCCAGCCCGTTGGCCGGGCCGCTGTGACAGGCGAGGCAGGAGCCGGACGGATCTTGGTTaGAAGAGGGAGAAAGAAAGG +
Preference number: 4 (lower is better)
Translates to: QPGAPARWPGRCDRRGRSRTDLG*KREKER
Trigger: CCTTTCTTTCTCCCTCTTGCAACCAAGATCCGTCCG...GCTCCTGCCTCGCCTGTCACAGCGGCCCGGCCAACGGGCTGGCGCCCCGGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222761.7
CDS-3UTR GCA 90 bp AGCGCGACGGAGGAGGCCTTGCTGAGCACCGAGGGCGCGAAGGTGAGGAAGGAGGCTCCGGCAGCGGGCTaGCCACGGCTTCGGACAAAT +
Preference number: 4 (lower is better)
Translates to: SATEEALLSTEGAKVRKEAPAAG*PRLRTN
Trigger: ATTTGTCCGAAGCCGTGGGCAGCCCGCTGCCGGAGC...CTCCTTCCTCACCTTCGCGCCCTCGGTGCTCAGCAAGGCCTCCTCCGTCGCGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222761.7
CDS-3UTR GCA 90 bp GGCCTTGCTGAGCACCGAGGGCGCGAAGGTGAGGAAGGAGTCCGAGCGGGAGGTCACCACTGCCGCCGTTaGTCTTGGGGGTCTCGCTCC +
Preference number: 4 (lower is better)
Translates to: GLAEHRGREGEEGVRAGGHHCRR*SWGSRS
Trigger: GGAGCGAGACCCCCAAGAGCAACGGCGGCAGTGGTG...ACCTCCCGCTCGGACTCCTTCCTCACCTTCGCGCCCTCGGTGCTCAGCAAGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000580535.1
CDS-3UTR GCA 90 bp GGCCGCCGCATGGCTCATCATGTAAGTGTAGAAGGCGGGGTCCGCCGGGTGCGGTCTGGTCACTGGCGCTaGACGCCAGGGTGCCTTGCG +
Preference number: 4 (lower is better)
Translates to: GRRMAHHVSVEGGVRRVRSGHWR*TPGCLA
Trigger: CGCAAGGCACCCTGGCGTGCAGCGCCAGTGACCAGA...CCGCACCCGGCGGACCCCGCCTTCTACACTTACATGATGAGCCATGCGGCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000580535.1
CDS-3UTR GCA 90 bp AGCGCGACGGAGGAGGCCTTGCTGAGCACCGAGGGCGCGAAGGTGAGGAAGGAGCCCTATCCCCACTCCTaGTCCCCAAACGCGCCAGCC +
Preference number: 4 (lower is better)
Translates to: SATEEALLSTEGAKVRKEPYPHS*SPNAPA
Trigger: GGCTGGCGCGTTTGGGGAGCAGGAGTGGGGATAGGG...CTCCTTCCTCACCTTCGCGCCCTCGGTGCTCAGCAAGGCCTCCTCCGTCGCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580535.1
CDS-3UTR CCA 90 bp GGTGCTGGCAGACGCCAGACCCAGAAGATGCTGTGTAGTCGAGGCTCCAGGTCCCCGCGACCGCGGCGGTaGCGGTGGGAGCTAGGGTCA +
Preference number: 4 (lower is better)
Translates to: GAGRRQTQKMLCSRGSRSPRPRR*RWELGS
Trigger: TGACCCTAGCTCCCACCGCCACCGCCGCGGTCGCGG...GGACCTGGAGCCTCGACTACACAGCATCTTCTGGGTCTGGCGTCTGCCAGCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR CCA 90 bp GCCGCGGGTAGGGCTGCGACAGCACGCGGAACGTGTCGAGCGGGCGCAGCGAGCCGGCCGGACGGATCTTaGTTGCAAGAGGGAGAAAGA +
Preference number: 4 (lower is better)
Translates to: AAGRAATARGTCRAGAASRPDGS*LQEGER
Trigger: TCTTTCTCCCTCTTGCAACCAAGATCCGTCCGGCCG...GCTCGCTGCGCCCGCTCGACACGTTCCGCGTGCTGTCGCAGCCCTACCCGCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222761.7
CDS-3UTR CCA 90 bp GCAGTTCGGGCCGCGGGTAGGGCTGCGACAGCACGCGGAACGTGTCGAGCGGGCCACATCTCCGCGGCCTaGATACGTAGTTCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: AVRAAGRAATARGTCRAGHISAA*IRSSPG
Trigger: ACCGGGAGAACTACGTATCCAGGCCGCGGAGATGTG...GCCCGCTCGACACGTTCCGCGTGCTGTCGCAGCCCTACCCGCGGCCCGAACTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000580535.1
3UTR CAA 72 bp ACCTCCTCCCTCTGGTCCAGCGCGACGGAGGAGGCCTaGCTGAGCACCGAGGGCGCGAAGGTGAGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: TSSLWSSATEEA*LSTEGAKVRKE
Trigger: CTCCTTCCTCACCTTCGCGCCCTCGGTGCTCAGCAAGGCCTCCTCCGTCGCGCTGGACCAGAGGGAGGAGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000580535.1
CDS-3UTR TCA 90 bp CGCCCGCGGCCGCCGCATGGCTCATCATGTAAGTGTAGAAGGCGGGGTCCGCCGGCTAGGGTCACCTTGTaGAGCGAGCGCTCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: RPRPPHGSSCKCRRRGPPARVTL*SERSSV
Trigger: CACAGAGGAGCGCTCGCTTCACAAGGTGACCCTAGC...CGGCGGACCCCGCCTTCTACACTTACATGATGAGCCATGCGGCGGCCGCGGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222761.7
CDS-3UTR TCA 90 bp CGCCCGCGGCCGCCGCATGGCTCATCATGTAAGTGTAGAAGGCGGGGTCCGCCGCAATCTGCTCTCGGGTaGAGGCGGTGCGGTAACGAC +
Preference number: 4 (lower is better)
Translates to: RPRPPHGSSCKCRRRGPPQSALG*RRCGND
Trigger: GTCGTTACCGCACCGCCTTCACCCGAGAGCAGATTG...CGGCGGACCCCGCCTTCTACACTTACATGATGAGCCATGCGGCGGCCGCGGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000580535.1
CDS-3UTR TCA 90 bp GCAGTTCGGGCCGCGGGTAGGGCTGCGACAGCACGCGGAACGTGTCGAGCGGGCTCTGGAACCACACCTTaGTGGTGGTTTCCGGCAGGT +
Preference number: 4 (lower is better)
Translates to: AVRAAGRAATARGTCRAGSGTTP*WWFPAG
Trigger: ACCTGCCGGAAACCACCATCAAGGTGTGGTTCCAGA...GCCCGCTCGACACGTTCCGCGTGCTGTCGCAGCCCTACCCGCGGCCCGAACTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000580535.1
CDS-3UTR GCA 90 bp GTGGCGGAAGGCGCACAGCAGTTCGGGCCGCGGGTAGGGCTGCGACAGCACGCGGCCAGACCCAGAAGATaGTGTGTAGTCGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: VAEGAQQFGPRVGLRQHAARPRR*CVVEAP
Trigger: TGGAGCCTCGACTACACAGCATCTTCTGGGTCTGGC...CGCGTGCTGTCGCAGCCCTACCCGCGGCCCGAACTGCTGTGCGCCTTCCGCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580535.1
CDS-3UTR GCA 90 bp TCCCTATCCCCACTCCTGCTCCCCAAACGCGCCAGCCACCGCCACTTCCTAGGCCCGGACCCTTTGCTGTaGTGGTACTCGGCGTTCCCG +
Preference number: 4 (lower is better)
Translates to: SLSPLLLPKRASHRHFLGPDPLL*WYSAFP
Trigger: CGGGAACGCCGAGTACCAGCACAGCAAAGGGTCCGG...GCCTAGGAAGTGGCGGTGGCTGGCGCGTTTGGGGAGCAGGAGTGGGGATAGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR GCA 90 bp CTCTGGTCCAGCGCGACGGAGGAGGCCTTGCTGAGCACCGAGGGCGCGAAGGTGAGGCTTTCCAATTCTTaGGGCCGGATCCCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: LWSSATEEALLSTEGAKVRLSNS*GRIPLV
Trigger: GACCAGCGGGATCCGGCCGCAAGAATTGGAAAGCCT...CACCTTCGCGCCCTCGGTGCTCAGCAAGGCCTCCTCCGTCGCGCTGGACCAGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580535.1
CDS-3UTR GCA 90 bp GGCGGATGCGGCGCCCAGGCCCACCGGCGAGTAGTAGGGCAGGGGCAGGTGCGACTGTCATCCTCCTGCTaGAATCGTCATTACAGTACC +
Preference number: 4 (lower is better)
Translates to: GGCGAQAHRRVVGQGQVRLSSSC*NRHYST
Trigger: GGTACTGTAATGACGATTGCAGCAGGAGGATGACAG...TCGCACCTGCCCCTGCCCTACTACTCGCCGGTGGGCCTGGGCGCCGCATCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222761.7
CDS-3UTR GCA 90 bp CTCTGGTCCAGCGCGACGGAGGAGGCCTTGCTGAGCACCGAGGGCGCGAAGGTGTCTTGCCAACCAGAGTaGCAAGCTGACCCCCATCCA +
Preference number: 4 (lower is better)
Translates to: LWSSATEEALLSTEGAKVSCQPE*QADPHP
Trigger: TGGATGGGGGTCAGCTTGGCACTCTGGTTGGCAAGA...CACCTTCGCGCCCTCGGTGCTCAGCAAGGCCTCCTCCGTCGCGCTGGACCAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000222761.7
CDS-3UTR GCA 90 bp GACGCCAGACCCAGAAGATGCTGTGTAGTCGAGGCTCCAGGTCCCATGCCAAGGGGTGGGTCCGGAGGCTaGCCCGGAGGAAGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: DARPRRCCVVEAPGPMPRGGSGG*PGGRSL
Trigger: GAGAGACCTTCCTCCGGGGCAGCCTCCGGACCCACC...CCTTGGCATGGGACCTGGAGCCTCGACTACACAGCATCTTCTGGGTCTGGCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS-3UTR CCA 90 bp TCCCTATCCCCACTCCTGCTCCCCAAACGCGCCAGCCACCGCCACTTCCTAGGCGACCCTTTGCTGTGCTaGTACTCGGCGTTCCCGGTG +
Preference number: 4 (lower is better)
Translates to: SLSPLLLPKRASHRHFLGDPLLC*YSAFPV
Trigger: CACCGGGAACGCCGAGTACCAGCACAGCAAAGGGTC...GCCTAGGAAGTGGCGGTGGCTGGCGCGTTTGGGGAGCAGGAGTGGGGATAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR CCA 90 bp GTCGAGGCTCCAGGTCCCATGCCAAGGGGCTGGATTCTCCCTGGTAGTAAATCAAGCGAGGAGCGAGGCTaGCTGAGTCCCGGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: VEAPGPMPRGWILPGSKSSEERG*LSPGAG
Trigger: CCCGGCCCCGGGACTCAGCCAGCCTCGCTCCTCGCT...TGATTTACTACCAGGGAGAATCCAGCCCCTTGGCATGGGACCTGGAGCCTCGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS-3UTR TCA 90 bp GCAGTTCGGGCCGCGGGTAGGGCTGCGACAGCACGCGGAACGTGTCGAGCGGGCTCACAAAGCTGGGAATaGGGAAAGAGATCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: AVRAAGRAATARGTCRAGSQSWE*GKRSGA
Trigger: AGCACCTGATCTCTTTCCTCATTCCCAGCTTTGTGA...GCCCGCTCGACACGTTCCGCGTGCTGTCGCAGCCCTACCCGCGGCCCGAACTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580535.1
CDS-3UTR GCA 90 bp AAGTTCCCACTCCCTAAGCTCTTCCCTGGGCGCCTTGTTAACAGCTCAGCTCTGCCGGCCCCGCCGCGCTaGCTGCGAGTCCATCTACCG +
Preference number: 4 (lower is better)
Translates to: KFPLPKLFPGRLVNSSALPAPPR*LRVHLP
Trigger: CGGTAGATGGACTCGCAGGCAGCGCGGCGGGGCCGG...CAGAGCTGAGCTGTTAACAAGGCGCCCAGGGAAGAGCTTAGGGAGTGGGAACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR TCA 90 bp CTCCTCCCTCTGGTCCAGCGCGACGGAGGAGGCCTTGCTGAGCACCGAGGGCGCACTCTCTCCTCCAAATaGCTGGTATGTTGCCATCCA +
Preference number: 4 (lower is better)
Translates to: LLPLVQRDGGGLAEHRGRTLSSK*LVCCHP
Trigger: TGGATGGCAACATACCAGTCATTTGGAGGAGAGAGT...GCGCCCTCGGTGCTCAGCAAGGCCTCCTCCGTCGCGCTGGACCAGAGGGAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580535.1
CDS-3UTR CCA 90 bp GACGCCAGACCCAGAAGATGCTGTGTAGTCGAGGCTCCAGGTCCCATGCCAAGGCGGTGTCCGAGCTACTaGGTTGCCCCTGTCCGGAGA +
Preference number: 4 (lower is better)
Translates to: DARPRRCCVVEAPGPMPRRCPSY*VAPVRR
Trigger: TCTCCGGACAGGGGCAACCCAGTAGCTCGGACACCG...CCTTGGCATGGGACCTGGAGCCTCGACTACACAGCATCTTCTGGGTCTGGCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR CCA 90 bp TCCCTATCCCCACTCCTGCTCCCCAAACGCGCCAGCCACCGCCACTTCCTAGGCGAGGGGCCGAGGGACTaGATATTGGTTGCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: SLSPLLLPKRASHRHFLGEGPRD*ILVAVA
Trigger: AGCAACAGCAACCAATATCCAGTCCCTCGGCCCCTC...GCCTAGGAAGTGGCGGTGGCTGGCGCGTTTGGGGAGCAGGAGTGGGGATAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS-3UTR CCA 90 bp GGCCTTGCTGAGCACCGAGGGCGCGAAGGTGAGGAAGGAGTCCGAGCGGGAGGTCCCATGCCAAGGGGCTaGATTCTCCCTGGTAGTAAA +
Preference number: 4 (lower is better)
Translates to: GLAEHRGREGEEGVRAGGPMPRG*ILPGSK
Trigger: TTTACTACCAGGGAGAATCCAGCCCCTTGGCATGGG...ACCTCCCGCTCGGACTCCTTCCTCACCTTCGCGCCCTCGGTGCTCAGCAAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580535.1
CDS-3UTR CCA 90 bp CAGCGCGACGGAGGAGGCCTTGCTGAGCACCGAGGGCGCGAAGGTGAGGAAGGAAAAGAGATCAGGTGCTaGCAGACGCCAGACCCAGAA +
Preference number: 4 (lower is better)
Translates to: QRDGGGLAEHRGREGEEGKEIRC*QTPDPE
Trigger: TTCTGGGTCTGGCGTCTGCCAGCACCTGATCTCTTT...TCCTTCCTCACCTTCGCGCCCTCGGTGCTCAGCAAGGCCTCCTCCGTCGCGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580535.1
CDS-3UTR TCA 90 bp GAGGAGGCCTTGCTGAGCACCGAGGGCGCGAAGGTGAGGAAGGAGTCCGAGCGGGGCTTCGGACAAATTTaGGACTCTCTTGCCAACCAG +
Preference number: 4 (lower is better)
Translates to: EEALLSTEGAKVRKESERGFGQI*DSLANQ
Trigger: CTGGTTGGCAAGAGAGTCTCAAATTTGTCCGAAGCC...CCGCTCGGACTCCTTCCTCACCTTCGCGCCCTCGGTGCTCAGCAAGGCCTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222761.7
CDS-3UTR GCA 90 bp GTTGCTGCTAAGTTTTGTTTAGCTTTGGAGCTACAGCCTCGACCCTGGTGGGGGAGCCGCCCCCACCACTaGCGCCGTTGCTCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: VAAKFCLALELQPRPWWGSRPHH*RRCSWG
Trigger: CCCCCAAGAGCAACGGCGGCAGTGGTGGGGGCGGCT...CCCCCACCAGGGTCGAGGCTGTAGCTCCAAAGCTAAACAAAACTTAGCAGCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS-3UTR GCA 90 bp GACAGAAGGCTCCCACTGGTATCTGAAAGTCAAGCTCCAGTGGTAGCTTGGGAACGCTGCACGCCAGGGTaGCTTGCGAGCCGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: DRRLPLVSESQAPVVAWERCTPG*LASRPH
Trigger: GTGGGGGCGGCTCGCAAGGCACCCTGGCGTGCAGCG...TTCCCAAGCTACCACTGGAGCTTGACTTTCAGATACCAGTGGGAGCCTTCTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR CCA 90 bp GGTGCTGGCAGACGCCAGACCCAGAAGATGCTGTGTAGTCGAGGCTCCAGGTCCCACATCTCCGCGGCCTaGATACGTAGTTCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: GAGRRQTQKMLCSRGSRSHISAA*IRSSPG
Trigger: ACCGGGAGAACTACGTATCCAGGCCGCGGAGATGTG...GGACCTGGAGCCTCGACTACACAGCATCTTCTGGGTCTGGCGTCTGCCAGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS-3UTR CCA 90 bp CTCTGGTCCAGCGCGACGGAGGAGGCCTTGCTGAGCACCGAGGGCGCGAAGGTGTCTCCTCCAAATGACTaGTATGTTGCCATCCACCAG +
Preference number: 4 (lower is better)
Translates to: LWSSATEEALLSTEGAKVSPPND*YVAIHQ
Trigger: CTGGTGGATGGCAACATACCAGTCATTTGGAGGAGA...CACCTTCGCGCCCTCGGTGCTCAGCAAGGCCTCCTCCGTCGCGCTGGACCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580535.1
CDS-3UTR TCA 90 bp GACAGAAGGCTCCCACTGGTATCTGAAAGTCAAGCTCCAGTGGTAGCTTGGGAACGGAGGAGGCCTTGCTaGGCACCGAGGGCGCGAAGG +
Preference number: 4 (lower is better)
Translates to: DRRLPLVSESQAPVVAWERRRPC*APRARR
Trigger: CCTTCGCGCCCTCGGTGCTCAGCAAGGCCTCCTCCG...TTCCCAAGCTACCACTGGAGCTTGACTTTCAGATACCAGTGGGAGCCTTCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR GCA 90 bp AAGTTCCCACTCCCTAAGCTCTTCCCTGGGCGCCTTGTTAACAGCTCAGCTCTGGCTCCGGCAGCGGGCTaGCCACGGCTTCGGACAAAT +
Preference number: 4 (lower is better)
Translates to: KFPLPKLFPGRLVNSSALAPAAG*PRLRTN
Trigger: ATTTGTCCGAAGCCGTGGGCAGCCCGCTGCCGGAGC...CAGAGCTGAGCTGTTAACAAGGCGCCCAGGGAAGAGCTTAGGGAGTGGGAACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR GCA 90 bp GTTGCTGCTAAGTTTTGTTTAGCTTTGGAGCTACAGCCTCGACCCTGGTGGGGGTCCCTCCGTTCGGACTaGCGACCAGCGCCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: VAAKFCLALELQPRPWWGSLRSD*RPAPRS
Trigger: GCTCCGAGGCGCTGGTCGGCAGTCCGAACGGAGGGA...CCCCCACCAGGGTCGAGGCTGTAGCTCCAAAGCTAAACAAAACTTAGCAGCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS-3UTR GCA 90 bp GACAGAAGGCTCCCACTGGTATCTGAAAGTCAAGCTCCAGTGGTAGCTTGGGAACACGCCAGGGTGCCTTaGGAGCCGCCCCCACCACTG +
Preference number: 4 (lower is better)
Translates to: DRRLPLVSESQAPVVAWEHARVP*EPPPPL
Trigger: CAGTGGTGGGGGCGGCTCGCAAGGCACCCTGGCGTG...TTCCCAAGCTACCACTGGAGCTTGACTTTCAGATACCAGTGGGAGCCTTCTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR CCA 90 bp GCCATCCACCAGCCCCTTGTCATGCCTTGGAAAAGCTGGCAAAGATTAATCTCTTGCTGGAGCGCGGTCTaGACCGCGACCGCGGCGGTG +
Preference number: 4 (lower is better)
Translates to: AIHQPLVMPWKSWQRLISCWSAV*TATAAV
Trigger: CACCGCCGCGGTCGCGGTCCAGACCGCGCTCCAGCA...AGAGATTAATCTTTGCCAGCTTTTCCAAGGCATGACAAGGGGCTGGTGGATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR CCA 90 bp GACAGAAGGCTCCCACTGGTATCTGAAAGTCAAGCTCCAGTGGTAGCTTGGGAAGTCCTGGGCCGAGCATaGCCGCCCCAGCTACCTGGG +
Preference number: 4 (lower is better)
Translates to: DRRLPLVSESQAPVVAWEVLGRA*PPQLPG
Trigger: CCCAGGTAGCTGGGGCGGCCATGCTCGGCCCAGGAC...TTCCCAAGCTACCACTGGAGCTTGACTTTCAGATACCAGTGGGAGCCTTCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR CCA 90 bp CGCCCGCGGCCGCCGCATGGCTCATCATGTAAGTGTAGAAGGCGGGGTCCGCCGCCCCTTGTCATGCCTTaGAAAAGCTGGCAAAGATTA +
Preference number: 4 (lower is better)
Translates to: RPRPPHGSSCKCRRRGPPPLVMP*KSWQRL
Trigger: TAATCTTTGCCAGCTTTTCCAAGGCATGACAAGGGG...CGGCGGACCCCGCCTTCTACACTTACATGATGAGCCATGCGGCGGCCGCGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000580535.1
CDS-3UTR CCA 90 bp GGTGCTGGCAGACGCCAGACCCAGAAGATGCTGTGTAGTCGAGGCTCCAGGTCCGCTCTAAACAAACCCTaGTGGAGGCCACAGACAGGG +
Preference number: 4 (lower is better)
Translates to: GAGRRQTQKMLCSRGSRSALNKP*WRPQTG
Trigger: CCCTGTCTGTGGCCTCCACCAGGGTTTGTTTAGAGC...GGACCTGGAGCCTCGACTACACAGCATCTTCTGGGTCTGGCGTCTGCCAGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR TCA 90 bp GTCGAGGCTCCAGGTCCCATGCCAAGGGGCTGGATTCTCCCTGGTAGTAAATCAGCTAGGGTCACCTTGTaGAGCGAGCGCTCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: VEAPGPMPRGWILPGSKSARVTL*SERSSV
Trigger: CACAGAGGAGCGCTCGCTTCACAAGGTGACCCTAGC...TGATTTACTACCAGGGAGAATCCAGCCCCTTGGCATGGGACCTGGAGCCTCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR TCA 90 bp CCAGCCCCTTGTCATGCCTTGGAAAAGCTGGCAAAGATTAATCTCTACCTGCTCTTGGCCGGGCCGCTGTaGCAGGCGAGGCAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: PAPCHALEKLAKINLYLLLAGPL*QARQEQ
Trigger: CTGCTCCTGCCTCGCCTGTCACAGCGGCCCGGCCAA...GAGCAGGTAGAGATTAATCTTTGCCAGCTTTTCCAAGGCATGACAAGGGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS-3UTR GCA 90 bp GGCCTTGCTGAGCACCGAGGGCGCGAAGGTGAGGAAGGAGTCCGAGCGGGAGGTAAGCTGTCATCCTCCTaGTGCAATCGTCATTACAGT +
Preference number: 4 (lower is better)
Translates to: GLAEHRGREGEEGVRAGGKLSSS*CNRHYS
Trigger: ACTGTAATGACGATTGCAGCAGGAGGATGACAGCTT...ACCTCCCGCTCGGACTCCTTCCTCACCTTCGCGCCCTCGGTGCTCAGCAAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222761.7
CDS-3UTR GCA 90 bp GGCCGCCGCATGGCTCATCATGTAAGTGTAGAAGGCGGGGTCCGCCGGGTGCGGAATTTGAGACTCTCTTaGCAACCAGAGTGCCAAGCT +
Preference number: 4 (lower is better)
Translates to: GRRMAHHVSVEGGVRRVRNLRLS*QPECQA
Trigger: AGCTTGGCACTCTGGTTGGCAAGAGAGTCTCAAATT...CCGCACCCGGCGGACCCCGCCTTCTACACTTACATGATGAGCCATGCGGCGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222761.7
CDS-3UTR GCA 90 bp GGTGCTGGCAGACGCCAGACCCAGAAGATGCTGTGTAGTCGAGGCTCCAGGTCCAATTTCCCTTTCCAGTaGTTGGGCCTTGGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: GAGRRQTQKMLCSRGSRSNFPFQ*LGLGWG
Trigger: TCCCCAGCCAAGGCCCAAGCACTGGAAAGGGAAATT...GGACCTGGAGCCTCGACTACACAGCATCTTCTGGGTCTGGCGTCTGCCAGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS-3UTR CCA 90 bp AGGCTCCCACTGGTATCTGAAAGTCAAGCTCCAGTGGTAGCTTGGGAAGAAAATACCCCACGGGCGTCATaGAGCCGGCAGCCAGCCGGC +
Preference number: 4 (lower is better)
Translates to: RLPLVSESQAPVVAWEENTPRAS*SRQPAG
Trigger: GCCGGCTGGCTGCCGGCTCCATGACGCCCGTGGGGT...ATTTTCTTCCCAAGCTACCACTGGAGCTTGACTTTCAGATACCAGTGGGAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR CCA 90 bp AGGCTCCCACTGGTATCTGAAAGTCAAGCTCCAGTGGTAGCTTGGGAAGAAAATAGCGAGGAGCGAGGCTaGCTGAGTCCCGGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: RLPLVSESQAPVVAWEENSEERG*LSPGAG
Trigger: CCCGGCCCCGGGACTCAGCCAGCCTCGCTCCTCGCT...ATTTTCTTCCCAAGCTACCACTGGAGCTTGACTTTCAGATACCAGTGGGAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR CCA 90 bp GTAGTCGAGGCTCCAGGTCCCATGCCAAGGGGCTGGATTCTCCCTGGTAGTAAATCCCTTTCCAGTGCTTaGGCCTTGGCTGGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: VVEAPGPMPRGWILPGSKSLSSA*ALAGER
Trigger: CCTCTCCCCAGCCAAGGCCCAAGCACTGGAAAGGGA...TTTACTACCAGGGAGAATCCAGCCCCTTGGCATGGGACCTGGAGCCTCGACTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS-3UTR CCA 90 bp TTCCTAGGCTTTCCAATTCTTGCGGCCGGATCCCGCTGGTCCTTTTCCGCCCTCGGGGGCAGGGAGAGATaGAGCCGCAAGTTGAGAAGT +
Preference number: 4 (lower is better)
Translates to: FLGFPILAAGSRWSFSALGGRER*SRKLRS
Trigger: ACTTCTCAACTTGCGGCTCCATCTCTCCCTGCCCCC...GAGGGCGGAAAAGGACCAGCGGGATCCGGCCGCAAGAATTGGAAAGCCTAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS-3UTR TCA 90 bp TTCCTAGGCTTTCCAATTCTTGCGGCCGGATCCCGCTGGTCCTTTTCCGCCCTCTCTGGAACCACACCTTaGTGGTGGTTTCCGGCAGGT +
Preference number: 4 (lower is better)
Translates to: FLGFPILAAGSRWSFSALSGTTP*WWFPAG
Trigger: ACCTGCCGGAAACCACCATCAAGGTGTGGTTCCAGA...GAGGGCGGAAAAGGACCAGCGGGATCCGGCCGCAAGAATTGGAAAGCCTAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS-3UTR TCA 90 bp GTCGAGGCTCCAGGTCCCATGCCAAGGGGCTGGATTCTCCCTGGTAGTAAATCAACCGAGAGAGGGAGGTaGAGTTCCCACTCCCTAAGC +
Preference number: 4 (lower is better)
Translates to: VEAPGPMPRGWILPGSKSTERGR*SSHSLS
Trigger: GCTTAGGGAGTGGGAACTTCACCTCCCTCTCTCGGT...TGATTTACTACCAGGGAGAATCCAGCCCCTTGGCATGGGACCTGGAGCCTCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR GCA 90 bp GACAGAAGGCTCCCACTGGTATCTGAAAGTCAAGCTCCAGTGGTAGCTTGGGAAGAAAGAAAGGCCGGGTaGCTGGGAGGGCGCGGAGCT +
Preference number: 4 (lower is better)
Translates to: DRRLPLVSESQAPVVAWEERKAG*LGGRGA
Trigger: AGCTCCGCGCCCTCCCAGGCACCCGGCCTTTCTTTC...TTCCCAAGCTACCACTGGAGCTTGACTTTCAGATACCAGTGGGAGCCTTCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR GCA 90 bp GTTGCTGCTAAGTTTTGTTTAGCTTTGGAGCTACAGCCTCGACCCTGGTGGGGGTCCGAGCTACTGGGTTaGCCCTGTCCGGAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: VAAKFCLALELQPRPWWGSELLG*PCPERL
Trigger: CAGCCTCTCCGGACAGGGGCAACCCAGTAGCTCGGA...CCCCCACCAGGGTCGAGGCTGTAGCTCCAAAGCTAAACAAAACTTAGCAGCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR GCA 90 bp CCAGCCCCTTGTCATGCCTTGGAAAAGCTGGCAAAGATTAATCTCTACCTGCTCTCCCTCCGTTCGGACTaGCGACCAGCGCCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: PAPCHALEKLAKINLYLLSLRSD*RPAPRS
Trigger: GCTCCGAGGCGCTGGTCGGCAGTCCGAACGGAGGGA...GAGCAGGTAGAGATTAATCTTTGCCAGCTTTTCCAAGGCATGACAAGGGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS-3UTR GCA 90 bp TTGGTTGCTGTTGCTGCTAAGTTTTGTTTAGCTTTGGAGCTACAGCCTCGACCCAGCCGCCCCCACCACTaGCGCCGTTGCTCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: LVAVAAKFCLALELQPRPSRPHH*RRCSWG
Trigger: CCCCCAAGAGCAACGGCGGCAGTGGTGGGGGCGGCT...GGGTCGAGGCTGTAGCTCCAAAGCTAAACAAAACTTAGCAGCAACAGCAACCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS-3UTR GCA 90 bp GTTGCTGCTAAGTTTTGTTTAGCTTTGGAGCTACAGCCTCGACCCTGGTGGGGGTCCAGCCGCGCAATCTaGTCTCGGGTGAAGGCGGTG +
Preference number: 4 (lower is better)
Translates to: VAAKFCLALELQPRPWWGSSRAI*SRVKAV
Trigger: CACCGCCTTCACCCGAGAGCAGATTGCGCGGCTGGA...CCCCCACCAGGGTCGAGGCTGTAGCTCCAAAGCTAAACAAAACTTAGCAGCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS-3UTR GCA 90 bp GTAGTCGAGGCTCCAGGTCCCATGCCAAGGGGCTGGATTCTCCCTGGTAGTAAAAGGCTTTCCAATTCTTaGGGCCGGATCCCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: VVEAPGPMPRGWILPGSKRLSNS*GRIPLV
Trigger: GACCAGCGGGATCCGGCCGCAAGAATTGGAAAGCCT...TTTACTACCAGGGAGAATCCAGCCCCTTGGCATGGGACCTGGAGCCTCGACTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS-3UTR CCA 90 bp CCCCTTGTCATGCCTTGGAAAAGCTGGCAAAGATTAATCTCTACCTGCTCTGCAGAAAGGCCGGGTGCCTaGGAGGGCGCGGAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PLVMPWKSWQRLISTCSAERPGA*EGAELL
Trigger: CAGCAGCTCCGCGCCCTCCCAGGCACCCGGCCTTTC...TGCAGAGCAGGTAGAGATTAATCTTTGCCAGCTTTTCCAAGGCATGACAAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR CCA 90 bp GTCGAGGCTCCAGGTCCCATGCCAAGGGGCTGGATTCTCCCTGGTAGTAAATCAGGGGGCAGGGAGAGATaGAGCCGCAAGTTGAGAAGT +
Preference number: 4 (lower is better)
Translates to: VEAPGPMPRGWILPGSKSGGRER*SRKLRS
Trigger: ACTTCTCAACTTGCGGCTCCATCTCTCCCTGCCCCC...TGATTTACTACCAGGGAGAATCCAGCCCCTTGGCATGGGACCTGGAGCCTCGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS-3UTR TCA 90 bp GGTGCTGGCAGACGCCAGACCCAGAAGATGCTGTGTAGTCGAGGCTCCAGGTCCACTCTCTCCTCCAAATaGCTGGTATGTTGCCATCCA +
Preference number: 4 (lower is better)
Translates to: GAGRRQTQKMLCSRGSRSTLSSK*LVCCHP
Trigger: TGGATGGCAACATACCAGTCATTTGGAGGAGAGAGT...GGACCTGGAGCCTCGACTACACAGCATCTTCTGGGTCTGGCGTCTGCCAGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS-3UTR GCA 90 bp GTATGTTGCCATCCACCAGCCCCTTGTCATGCCTTGGAAAAGCTGGCAAAGATTTCTGGTCACTGGCGCTaGACGCCAGGGTGCCTTGCG +
Preference number: 4 (lower is better)
Translates to: VCCHPPAPCHALEKLAKISGHWR*TPGCLA
Trigger: CGCAAGGCACCCTGGCGTGCAGCGCCAGTGACCAGA...AATCTTTGCCAGCTTTTCCAAGGCATGACAAGGGGCTGGTGGATGGCAACATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS-3UTR GCA 90 bp AAGTTCCCACTCCCTAAGCTCTTCCCTGGGCGCCTTGTTAACAGCTCAGCTCTGTGGCGCAGTCCGGGGTaGAGCTCACCTCGATTTCTT +
Preference number: 4 (lower is better)
Translates to: KFPLPKLFPGRLVNSSALWRSPG*SSPRFL
Trigger: AAGAAATCGAGGTGAGCTGCACCCCGGACTGCGCCA...CAGAGCTGAGCTGTTAACAAGGCGCCCAGGGAAGAGCTTAGGGAGTGGGAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR GCA 90 bp GGCCGCCGCATGGCTCATCATGTAAGTGTAGAAGGCGGGGTCCGCCGGGTGCGGAATCTCTACCTGCTCTaGATACACAGCATTTTGTTC +
Preference number: 4 (lower is better)
Translates to: GRRMAHHVSVEGGVRRVRNLYLL*IHSILF
Trigger: GAACAAAATGCTGTGTATGCAGAGCAGGTAGAGATT...CCGCACCCGGCGGACCCCGCCTTCTACACTTACATGATGAGCCATGCGGCGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580535.1
CDS-3UTR CCA 90 bp TTGGTTGCTGTTGCTGCTAAGTTTTGTTTAGCTTTGGAGCTACAGCCTCGACCCGGCACCTCCTCCCTCTaGTCCAGCGCGACGGAGGAG +
Preference number: 4 (lower is better)
Translates to: LVAVAAKFCLALELQPRPGTSSL*SSATEE
Trigger: CTCCTCCGTCGCGCTGGACCAGAGGGAGGAGGTGCC...GGGTCGAGGCTGTAGCTCCAAAGCTAAACAAAACTTAGCAGCAACAGCAACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS-3UTR CCA 90 bp ATGCCTTGGAAAAGCTGGCAAAGATTAATCTCTACCTGCTCTGCATACACAGCAACCCCACGGGCGTCATaGAGCCGGCAGCCAGCCGGC +
Preference number: 4 (lower is better)
Translates to: MPWKSWQRLISTCSAYTATPRAS*SRQPAG
Trigger: GCCGGCTGGCTGCCGGCTCCATGACGCCCGTGGGGT...TGCTGTGTATGCAGAGCAGGTAGAGATTAATCTTTGCCAGCTTTTCCAAGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS-3UTR CCA 90 bp CCCCTTGTCATGCCTTGGAAAAGCTGGCAAAGATTAATCTCTACCTGCTCTGCAGCGGCCGGATCCCGCTaGTCCTTTTCCGCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: PLVMPWKSWQRLISTCSAAAGSR*SFSALS
Trigger: GGAGAGGGCGGAAAAGGACCAGCGGGATCCGGCCGC...TGCAGAGCAGGTAGAGATTAATCTTTGCCAGCTTTTCCAAGGCATGACAAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS-3UTR CCA 90 bp ATGCCTTGGAAAAGCTGGCAAAGATTAATCTCTACCTGCTCTGCATACACAGCACAGCCTCGACCCTGGTaGGGGGCGGTGGGTCCGGAG +
Preference number: 4 (lower is better)
Translates to: MPWKSWQRLISTCSAYTAQPRPW*GAVGPE
Trigger: CTCCGGACCCACCGCCCCCCACCAGGGTCGAGGCTG...TGCTGTGTATGCAGAGCAGGTAGAGATTAATCTTTGCCAGCTTTTCCAAGGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS-3UTR GCA 90 bp CTTGTCATGCCTTGGAAAAGCTGGCAAAGATTAATCTCTACCTGCTCTGCATACCCCCGCCGCGCTGCCTaGGAGTCCATCTACCGGCTC +
Preference number: 4 (lower is better)
Translates to: LVMPWKSWQRLISTCSAYPRRAA*ESIYRL
Trigger: GAGCCGGTAGATGGACTCGCAGGCAGCGCGGCGGGG...GTATGCAGAGCAGGTAGAGATTAATCTTTGCCAGCTTTTCCAAGGCATGACAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR GCA 90 bp ATGCCTTGGAAAAGCTGGCAAAGATTAATCTCTACCTGCTCTGCATACACAGCACACGCCAGGGTGCCTTaGGAGCCGCCCCCACCACTG +
Preference number: 4 (lower is better)
Translates to: MPWKSWQRLISTCSAYTAHARVP*EPPPPL
Trigger: CAGTGGTGGGGGCGGCTCGCAAGGCACCCTGGCGTG...TGCTGTGTATGCAGAGCAGGTAGAGATTAATCTTTGCCAGCTTTTCCAAGGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS-3UTR GCA 90 bp GCCATCCACCAGCCCCTTGTCATGCCTTGGAAAAGCTGGCAAAGATTAATCTCTCGGAGCCGGACCCTTTaGTGTGCTGGTACTCGGCGT +
Preference number: 4 (lower is better)
Translates to: AIHQPLVMPWKSWQRLISRSRTL*CAGTRR
Trigger: ACGCCGAGTACCAGCACAGCAAAGGGTCCGGCTCCG...AGAGATTAATCTTTGCCAGCTTTTCCAAGGCATGACAAGGGGCTGGTGGATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR GCA 90 bp AGGCTCCCACTGGTATCTGAAAGTCAAGCTCCAGTGGTAGCTTGGGAAGAAAATCCCTATCCCCACTCCTaGTCCCCAAACGCGCCAGCC +
Preference number: 4 (lower is better)
Translates to: RLPLVSESQAPVVAWEENPYPHS*SPNAPA
Trigger: GGCTGGCGCGTTTGGGGAGCAGGAGTGGGGATAGGG...ATTTTCTTCCCAAGCTACCACTGGAGCTTGACTTTCAGATACCAGTGGGAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR GCA 90 bp TTCCTAGGCTTTCCAATTCTTGCGGCCGGATCCCGCTGGTCCTTTTCCGCCCTCACCAGCCCCTTGTCATaGCTTGGAAAAGCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: FLGFPILAAGSRWSFSALTSPLS*LGKAGK
Trigger: TTTGCCAGCTTTTCCAAGGCATGACAAGGGGCTGGT...GAGGGCGGAAAAGGACCAGCGGGATCCGGCCGCAAGAATTGGAAAGCCTAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS-3UTR CCA 90 bp CCCCTTGTCATGCCTTGGAAAAGCTGGCAAAGATTAATCTCTACCTGCTCTGCATGCCGCCGTTGCTCTTaGGGGTCTCGCTCCCTCCGT +
Preference number: 4 (lower is better)
Translates to: PLVMPWKSWQRLISTCSACRRCS*GSRSLR
Trigger: ACGGAGGGAGCGAGACCCCCAAGAGCAACGGCGGCA...TGCAGAGCAGGTAGAGATTAATCTTTGCCAGCTTTTCCAAGGCATGACAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS-3UTR CCA 90 bp CTTGTCATGCCTTGGAAAAGCTGGCAAAGATTAATCTCTACCTGCTCTGCATACACTCGGCGTTCCCGGTaGCGCAGTCCGGGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: LVMPWKSWQRLISTCSAYTRRSR*RSPGCS
Trigger: GCTGCACCCCGGACTGCGCCACCGGGAACGCCGAGT...GTATGCAGAGCAGGTAGAGATTAATCTTTGCCAGCTTTTCCAAGGCATGACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR TCA 90 bp GCCATCCACCAGCCCCTTGTCATGCCTTGGAAAAGCTGGCAAAGATTAATCTCTCAATCTGCTCTCGGGTaGAGGCGGTGCGGTAACGAC +
Preference number: 4 (lower is better)
Translates to: AIHQPLVMPWKSWQRLISQSALG*RRCGND
Trigger: GTCGTTACCGCACCGCCTTCACCCGAGAGCAGATTG...AGAGATTAATCTTTGCCAGCTTTTCCAAGGCATGACAAGGGGCTGGTGGATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS-3UTR GCA 90 bp GTTGCTGCTAAGTTTTGTTTAGCTTTGGAGCTACAGCCTCGACCCTGGTGGGGGTCTTGCCAACCAGAGTaGCAAGCTGACCCCCATCCA +
Preference number: 4 (lower is better)
Translates to: VAAKFCLALELQPRPWWGSCQPE*QADPHP
Trigger: TGGATGGGGGTCAGCTTGGCACTCTGGTTGGCAAGA...CCCCCACCAGGGTCGAGGCTGTAGCTCCAAAGCTAAACAAAACTTAGCAGCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR GCA 90 bp CAAATCAAACCAAATTCATTCCCTACAGGAAGAACCACTCCCTCTCAGTCAGGGTCTGGTCACTGGCGCTaGACGCCAGGGTGCCTTGCG +
Preference number: 4 (lower is better)
Translates to: QIKPNSFPTGRTTPSQSGSGHWR*TPGCLA
Trigger: CGCAAGGCACCCTGGCGTGCAGCGCCAGTGACCAGA...CCCTGACTGAGAGGGAGTGGTTCTTCCTGTAGGGAATGAATTTGGTTTGATTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR CCA 90 bp ATGCCTTGGAAAAGCTGGCAAAGATTAATCTCTACCTGCTCTGCATACACAGCACCGCGGCGGTGGCGGTaGGAGCTAGGGTCACCTTGT +
Preference number: 4 (lower is better)
Translates to: MPWKSWQRLISTCSAYTAPRRWR*ELGSPC
Trigger: ACAAGGTGACCCTAGCTCCCACCGCCACCGCCGCGG...TGCTGTGTATGCAGAGCAGGTAGAGATTAATCTTTGCCAGCTTTTCCAAGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR GCA 90 bp CTTGTCATGCCTTGGAAAAGCTGGCAAAGATTAATCTCTACCTGCTCTGCATACCACCACTGCCGCCGTTaGTCTTGGGGGTCTCGCTCC +
Preference number: 4 (lower is better)
Translates to: LVMPWKSWQRLISTCSAYHHCRR*SWGSRS
Trigger: GGAGCGAGACCCCCAAGAGCAACGGCGGCAGTGGTG...GTATGCAGAGCAGGTAGAGATTAATCTTTGCCAGCTTTTCCAAGGCATGACAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS-3UTR TCA 90 bp AAGTTCCCACTCCCTAAGCTCTTCCCTGGGCGCCTTGTTAACAGCTCAGCTCTGCCAGAAAGTTCCTGGTaGAGTGAAGGTGAACAAGCA +
Preference number: 4 (lower is better)
Translates to: KFPLPKLFPGRLVNSSALPESSW*SEGEQA
Trigger: TGCTTGTTCACCTTCACTTCACCAGGAACTTTCTGG...CAGAGCTGAGCTGTTAACAAGGCGCCCAGGGAAGAGCTTAGGGAGTGGGAACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR GCA 90 bp GTAGTCGAGGCTCCAGGTCCCATGCCAAGGGGCTGGATTCTCCCTGGTAGTAAAAATTTGAGACTCTCTTaGCAACCAGAGTGCCAAGCT +
Preference number: 4 (lower is better)
Translates to: VVEAPGPMPRGWILPGSKNLRLS*QPECQA
Trigger: AGCTTGGCACTCTGGTTGGCAAGAGAGTCTCAAATT...TTTACTACCAGGGAGAATCCAGCCCCTTGGCATGGGACCTGGAGCCTCGACTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR GCA 90 bp GACGCCAGACCCAGAAGATGCTGTGTAGTCGAGGCTCCAGGTCCCATGCCAAGGAATCTCTACCTGCTCTaGATACACAGCATTTTGTTC +
Preference number: 4 (lower is better)
Translates to: DARPRRCCVVEAPGPMPRNLYLL*IHSILF
Trigger: GAACAAAATGCTGTGTATGCAGAGCAGGTAGAGATT...CCTTGGCATGGGACCTGGAGCCTCGACTACACAGCATCTTCTGGGTCTGGCGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS-3UTR CCA 90 bp CCAGCCCCTTGTCATGCCTTGGAAAAGCTGGCAAAGATTAATCTCTACCTGCTCCGGCCGGACGGATCTTaGTTGCAAGAGGGAGAAAGA +
Preference number: 4 (lower is better)
Translates to: PAPCHALEKLAKINLYLLRPDGS*LQEGER
Trigger: TCTTTCTCCCTCTTGCAACCAAGATCCGTCCGGCCG...GAGCAGGTAGAGATTAATCTTTGCCAGCTTTTCCAAGGCATGACAAGGGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR CCA 90 bp GTCGAGGCTCCAGGTCCCATGCCAAGGGGCTGGATTCTCCCTGGTAGTAAATCACCCCTTGTCATGCCTTaGAAAAGCTGGCAAAGATTA +
Preference number: 4 (lower is better)
Translates to: VEAPGPMPRGWILPGSKSPLVMP*KSWQRL
Trigger: TAATCTTTGCCAGCTTTTCCAAGGCATGACAAGGGG...TGATTTACTACCAGGGAGAATCCAGCCCCTTGGCATGGGACCTGGAGCCTCGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS-3UTR GCA 90 bp CCAGCCCCTTGTCATGCCTTGGAAAAGCTGGCAAAGATTAATCTCTACCTGCTCAGGTCTCTCAAGCTCTaGTTCCCTATCCCCACTCCT +
Preference number: 4 (lower is better)
Translates to: PAPCHALEKLAKINLYLLRSLKL*FPIPTP
Trigger: AGGAGTGGGGATAGGGAAGCAGAGCTTGAGAGACCT...GAGCAGGTAGAGATTAATCTTTGCCAGCTTTTCCAAGGCATGACAAGGGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS-3UTR GCA 90 bp GACAGAAGGCTCCCACTGGTATCTGAAAGTCAAGCTCCAGTGGTAGCTTGGGAAACCAGCCCCTTGTCATaGCTTGGAAAAGCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: DRRLPLVSESQAPVVAWETSPLS*LGKAGK
Trigger: TTTGCCAGCTTTTCCAAGGCATGACAAGGGGCTGGT...TTCCCAAGCTACCACTGGAGCTTGACTTTCAGATACCAGTGGGAGCCTTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR CCA 90 bp CTTGTCATGCCTTGGAAAAGCTGGCAAAGATTAATCTCTACCTGCTCTGCATACTCCCTTTCCAGTGCTTaGGCCTTGGCTGGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: LVMPWKSWQRLISTCSAYSLSSA*ALAGER
Trigger: CCTCTCCCCAGCCAAGGCCCAAGCACTGGAAAGGGA...GTATGCAGAGCAGGTAGAGATTAATCTTTGCCAGCTTTTCCAAGGCATGACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS-3UTR CCA 90 bp GTTGCTGCTAAGTTTTGTTTAGCTTTGGAGCTACAGCCTCGACCCTGGTGGGGGTCTCCTCCAAATGACTaGTATGTTGCCATCCACCAG +
Preference number: 4 (lower is better)
Translates to: VAAKFCLALELQPRPWWGSPPND*YVAIHQ
Trigger: CTGGTGGATGGCAACATACCAGTCATTTGGAGGAGA...CCCCCACCAGGGTCGAGGCTGTAGCTCCAAAGCTAAACAAAACTTAGCAGCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS-3UTR CCA 90 bp CCAGCCCCTTGTCATGCCTTGGAAAAGCTGGCAAAGATTAATCTCTACCTGCTCCCCATGCCAAGGGGCTaGATTCTCCCTGGTAGTAAA +
Preference number: 4 (lower is better)
Translates to: PAPCHALEKLAKINLYLLPMPRG*ILPGSK
Trigger: TTTACTACCAGGGAGAATCCAGCCCCTTGGCATGGG...GAGCAGGTAGAGATTAATCTTTGCCAGCTTTTCCAAGGCATGACAAGGGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS-3UTR CCA 90 bp GTTGCTGCTAAGTTTTGTTTAGCTTTGGAGCTACAGCCTCGACCCTGGTGGGGGACAGAAGGCTCCCACTaGTATCTGAAAGTCAAGCTC +
Preference number: 4 (lower is better)
Translates to: VAAKFCLALELQPRPWWGTEGSH*YLKVKL
Trigger: GAGCTTGACTTTCAGATACCAGTGGGAGCCTTCTGT...CCCCCACCAGGGTCGAGGCTGTAGCTCCAAAGCTAAACAAAACTTAGCAGCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR TCA 90 bp TGTCCAGCTTTTATTGCAATATGGTTAACGAATCATAACAGCAAGTTCTTTGGGAGGTGGAGGCACAGGTaGAGTCCGAGGCGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: CPAFIAIWLTNHNSKFFGRWRHR*SPRRRQ
Trigger: CTGCCGCCGCCTCGGACTTCACCTGTGCCTCCACCT...CCCAAAGAACTTGCTGTTATGATTCGTTAACCATATTGCAATAAAAGCTGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR TCA 90 bp TTGGTTGCTGTTGCTGCTAAGTTTTGTTTAGCTTTGGAGCTACAGCCTCGACCCGATGGAGCCGCAAGTTaGGAAGTGTCACAAAGCTGG +
Preference number: 4 (lower is better)
Translates to: LVAVAAKFCLALELQPRPDGAAS*EVSQSW
Trigger: CCAGCTTTGTGACACTTCTCAACTTGCGGCTCCATC...GGGTCGAGGCTGTAGCTCCAAAGCTAAACAAAACTTAGCAGCAACAGCAACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS-3UTR TCA 90 bp CCCCTTGTCATGCCTTGGAAAAGCTGGCAAAGATTAATCTCTACCTGCTCTGCAGCTCCCACTGGTATCTaGAAGTCAAGCTCCAGTGGT +
Preference number: 4 (lower is better)
Translates to: PLVMPWKSWQRLISTCSAAPTGI*KSSSSG
Trigger: ACCACTGGAGCTTGACTTTCAGATACCAGTGGGAGC...TGCAGAGCAGGTAGAGATTAATCTTTGCCAGCTTTTCCAAGGCATGACAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR GCA 90 bp CAAATCAAACCAAATTCATTCCCTACAGGAAGAACCACTCCCTCTCAGTCAGGGGCCAGACCCAGAAGATaGTGTGTAGTCGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: QIKPNSFPTGRTTPSQSGARPRR*CVVEAP
Trigger: TGGAGCCTCGACTACACAGCATCTTCTGGGTCTGGC...CCCTGACTGAGAGGGAGTGGTTCTTCCTGTAGGGAATGAATTTGGTTTGATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR CCA 90 bp TTGGTTGCTGTTGCTGCTAAGTTTTGTTTAGCTTTGGAGCTACAGCCTCGACCCAAAGAGATCAGGTGCTaGCAGACGCCAGACCCAGAA +
Preference number: 4 (lower is better)
Translates to: LVAVAAKFCLALELQPRPKEIRC*QTPDPE
Trigger: TTCTGGGTCTGGCGTCTGCCAGCACCTGATCTCTTT...GGGTCGAGGCTGTAGCTCCAAAGCTAAACAAAACTTAGCAGCAACAGCAACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
3UTR CAA 72 bp AAGAACCACTCCCTCTCAGTCAGGGTGAAGCTTGCATaGGGGTTACACGTTCTCCTCTTCCTCAAAAACTGG +
Preference number: 4 (lower is better)
Translates to: KNHSLSVRVKLA*GLHVLLFLKNW
Trigger: CCAGTTTTTGAGGAAGAGGAGAACGTGTAACCCCAATGCAAGCTTCACCCTGACTGAGAGGGAGTGGTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR GCA 90 bp TTGGTTGCTGTTGCTGCTAAGTTTTGTTTAGCTTTGGAGCTACAGCCTCGACCCCGGACGGATCTTGGTTaGAAGAGGGAGAAAGAAAGG +
Preference number: 4 (lower is better)
Translates to: LVAVAAKFCLALELQPRPRTDLG*KREKER
Trigger: CCTTTCTTTCTCCCTCTTGCAACCAAGATCCGTCCG...GGGTCGAGGCTGTAGCTCCAAAGCTAAACAAAACTTAGCAGCAACAGCAACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR GCA 90 bp CAAATCAAACCAAATTCATTCCCTACAGGAAGAACCACTCCCTCTCAGTCAGGGAGGTCTCTCAAGCTCTaGTTCCCTATCCCCACTCCT +
Preference number: 4 (lower is better)
Translates to: QIKPNSFPTGRTTPSQSGRSLKL*FPIPTP
Trigger: AGGAGTGGGGATAGGGAAGCAGAGCTTGAGAGACCT...CCCTGACTGAGAGGGAGTGGTTCTTCCTGTAGGGAATGAATTTGGTTTGATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR GCA 90 bp GTAGTCGAGGCTCCAGGTCCCATGCCAAGGGGCTGGATTCTCCCTGGTAGTAAAAGATTAATCTCTACCTaGTCTGCATACACAGCATTT +
Preference number: 4 (lower is better)
Translates to: VVEAPGPMPRGWILPGSKRLIST*SAYTAF
Trigger: AAATGCTGTGTATGCAGAGCAGGTAGAGATTAATCT...TTTACTACCAGGGAGAATCCAGCCCCTTGGCATGGGACCTGGAGCCTCGACTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS-3UTR TCA 90 bp CAAATCAAACCAAATTCATTCCCTACAGGAAGAACCACTCCCTCTCAGTCAGGGGGCTTCGGACAAATTTaGGACTCTCTTGCCAACCAG +
Preference number: 4 (lower is better)
Translates to: QIKPNSFPTGRTTPSQSGGFGQI*DSLANQ
Trigger: CTGGTTGGCAAGAGAGTCTCAAATTTGTCCGAAGCC...CCCTGACTGAGAGGGAGTGGTTCTTCCTGTAGGGAATGAATTTGGTTTGATTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR TCA 90 bp CCCCTTGTCATGCCTTGGAAAAGCTGGCAAAGATTAATCTCTACCTGCTCTGCATCACAAAGCTGGGAATaGGGAAAGAGATCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: PLVMPWKSWQRLISTCSASQSWE*GKRSGA
Trigger: AGCACCTGATCTCTTTCCTCATTCCCAGCTTTGTGA...TGCAGAGCAGGTAGAGATTAATCTTTGCCAGCTTTTCCAAGGCATGACAAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS-3UTR TCA 90 bp CTTGTCATGCCTTGGAAAAGCTGGCAAAGATTAATCTCTACCTGCTCTGCATACGATGGAGCCGCAAGTTaGGAAGTGTCACAAAGCTGG +
Preference number: 4 (lower is better)
Translates to: LVMPWKSWQRLISTCSAYDGAAS*EVSQSW
Trigger: CCAGCTTTGTGACACTTCTCAACTTGCGGCTCCATC...GTATGCAGAGCAGGTAGAGATTAATCTTTGCCAGCTTTTCCAAGGCATGACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS-3UTR CCA 90 bp TGTCCAGCTTTTATTGCAATATGGTTAACGAATCATAACAGCAAGTTCTTTGGGCTCTCCTTTCCCCCTTaGCGTCCTAGGGGCGAGGAG +
Preference number: 4 (lower is better)
Translates to: CPAFIAIWLTNHNSKFFGLSFPP*RPRGEE
Trigger: CTCCTCGCCCCTAGGACGCCAAGGGGGAAAGGAGAG...CCCAAAGAACTTGCTGTTATGATTCGTTAACCATATTGCAATAAAAGCTGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR CCA 90 bp TTGGTTGCTGTTGCTGCTAAGTTTTGTTTAGCTTTGGAGCTACAGCCTCGACCCGCTCCAGTGGTAGCTTaGGAAGAAAATGAGAGAAAG +
Preference number: 4 (lower is better)
Translates to: LVAVAAKFCLALELQPRPAPVVA*EENERK
Trigger: CTTTCTCTCATTTTCTTCCCAAGCTACCACTGGAGC...GGGTCGAGGCTGTAGCTCCAAAGCTAAACAAAACTTAGCAGCAACAGCAACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR GCA 90 bp CTTGTCATGCCTTGGAAAAGCTGGCAAAGATTAATCTCTACCTGCTCTGCATACAGTCAGGGTGAAGCTTaGATTGGGGTTACACGTTCT +
Preference number: 4 (lower is better)
Translates to: LVMPWKSWQRLISTCSAYSQGEA*IGVTRS
Trigger: AGAACGTGTAACCCCAATGCAAGCTTCACCCTGACT...GTATGCAGAGCAGGTAGAGATTAATCTTTGCCAGCTTTTCCAAGGCATGACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR CCA 90 bp TGTCCAGCTTTTATTGCAATATGGTTAACGAATCATAACAGCAAGTTCTTTGGGCACATCTCCGCGGCCTaGATACGTAGTTCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: CPAFIAIWLTNHNSKFFGHISAA*IRSSPG
Trigger: ACCGGGAGAACTACGTATCCAGGCCGCGGAGATGTG...CCCAAAGAACTTGCTGTTATGATTCGTTAACCATATTGCAATAAAAGCTGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR GCA 90 bp GCCATCCACCAGCCCCTTGTCATGCCTTGGAAAAGCTGGCAAAGATTAATCTCTAGATTAATCTCTACCTaGTCTGCATACACAGCATTT +
Preference number: 4 (lower is better)
Translates to: AIHQPLVMPWKSWQRLISRLIST*SAYTAF
Trigger: AAATGCTGTGTATGCAGAGCAGGTAGAGATTAATCT...AGAGATTAATCTTTGCCAGCTTTTCCAAGGCATGACAAGGGGCTGGTGGATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS-3UTR CCA 90 bp TTGGTTGCTGTTGCTGCTAAGTTTTGTTTAGCTTTGGAGCTACAGCCTCGACCCATGCCTTGGAAAAGCTaGCAAAGATTAATCTCTACC +
Preference number: 4 (lower is better)
Translates to: LVAVAAKFCLALELQPRPMPWKS*QRLIST
Trigger: GGTAGAGATTAATCTTTGCCAGCTTTTCCAAGGCAT...GGGTCGAGGCTGTAGCTCCAAAGCTAAACAAAACTTAGCAGCAACAGCAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS-3UTR CCA 90 bp ATGCCTTGGAAAAGCTGGCAAAGATTAATCTCTACCTGCTCTGCATACACAGCAATGCCTTGGAAAAGCTaGCAAAGATTAATCTCTACC +
Preference number: 4 (lower is better)
Translates to: MPWKSWQRLISTCSAYTAMPWKS*QRLIST
Trigger: GGTAGAGATTAATCTTTGCCAGCTTTTCCAAGGCAT...TGCTGTGTATGCAGAGCAGGTAGAGATTAATCTTTGCCAGCTTTTCCAAGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS-3UTR CAA 90 bp CCAGCCCGTTGGCCGGGCCGCTGTGACAGGCGAGGCAGGAGCAGGGGCCGCCGGCTGCCGCCGTTGCTCTaGGGGGTCTCGCTCCCTCCG +
Preference number: 5 (lower is better)
Translates to: PARWPGRCDRRGRSRGRRLPPLL*GVSLPP
Trigger: CGGAGGGAGCGAGACCCCCAAGAGCAACGGCGGCAG...CCGGCGGCCCCTGCTCCTGCCTCGCCTGTCACAGCGGCCCGGCCAACGGGCTGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000580535.1
CDS-3UTR CAA 90 bp GAGCGGGAGGTGGAGGCACAGGTGAAGTCCGAGGCGGCGGCAGCCCGGGGCGCCGCACGCCAGGGTGCCTaGCGAGCCGCCCCCACCACT +
Preference number: 5 (lower is better)
Translates to: EREVEAQVKSEAAAARGAARQGA*RAAPTT
Trigger: AGTGGTGGGGGCGGCTCGCAAGGCACCCTGGCGTGC...GGCGCCCCGGGCTGCCGCCGCCTCGGACTTCACCTGTGCCTCCACCTCCCGCTC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000580535.1
CDS-3UTR CAA 90 bp GCCGCGGGTAGGGCTGCGACAGCACGCGGAACGTGTCGAGCGGGCGCAGCGAGCGCGACGGAGGAGGCCTaGCTGAGCACCGAGGGCGCG +
Preference number: 5 (lower is better)
Translates to: AAGRAATARGTCRAGAASATEEA*LSTEGA
Trigger: CGCGCCCTCGGTGCTCAGCAAGGCCTCCTCCGTCGC...GCTCGCTGCGCCCGCTCGACACGTTCCGCGTGCTGTCGCAGCCCTACCCGCGGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000580535.1
CDS CCA 90 bp GGGCGCGGAGCTGCTGGAGCGCGGTCTGGACCGCGACCGCGGCGGTaGCGGTGGGAGCTAGGGTCACCTTGTGAAGCGAGCGCTCCTCTG +
Preference number: 5 (lower is better)
Translates to: GRGAAGARSGPRPRR*RWELGSPCEASAPL
Trigger: CAGAGGAGCGCTCGCTTCACAAGGTGACCCTAGCTCCCACCGCCACCGCCGCGGTCGCGGTCCAGACCGCGCTCCAGCAGCTCCGCGCCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000496902.7
CDS CCA 90 bp AGAGGGAGAAAGAAAGGCCGGGTGCCTGGGAGGGCGCGGAGCTGCTaGAGCGCGGTCTGGACCGCGACCGCGGCGGTGGCGGTGGGAGCT +
Preference number: 5 (lower is better)
Translates to: RGRKKGRVPGRARSC*SAVWTATAAVAVGA
Trigger: AGCTCCCACCGCCACCGCCGCGGTCGCGGTCCAGACCGCGCTCCAGCAGCTCCGCGCCCTCCCAGGCACCCGGCCTTTCTTTCTCCCTCT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000496902.7
CDS-3UTR CAA 90 bp GGCGGATGCGGCGCCCAGGCCCACCGGCGAGTAGTAGGGCAGGGGCAGGTGCGACCACCACTGCCGCCGTaGCTCTTGGGGGTCTCGCTC +
Preference number: 5 (lower is better)
Translates to: GGCGAQAHRRVVGQGQVRPPLPP*LLGVSL
Trigger: GAGCGAGACCCCCAAGAGCAACGGCGGCAGTGGTGG...TCGCACCTGCCCCTGCCCTACTACTCGCCGGTGGGCCTGGGCGCCGCATCCGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000580535.1
CDS GCA 90 bp CACTGGCGCTGCACGCCAGGGTGCCTTGCGAGCCGCCCCCACCACTaGCGCCGTTGCTCTTGGGGGTCTCGCTCCCTCCGTTCGGACTGC +
Preference number: 5 (lower is better)
Translates to: HWRCTPGCLASRPHH*RRCSWGSRSLRSDC
Trigger: GCAGTCCGAACGGAGGGAGCGAGACCCCCAAGAGCAACGGCGGCAGTGGTGGGGGCGGCTCGCAAGGCACCCTGGCGTGCAGCGCCAGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000222761.7
ENST00000496902.7
ENST00000580535.1
CDS CCA 90 bp GGAGCTGCTGGAGCGCGGTCTGGACCGCGACCGCGGCGGTGGCGGTaGGAGCTAGGGTCACCTTGTGAAGCGAGCGCTCCTCTGTGCCGC +
Preference number: 5 (lower is better)
Translates to: GAAGARSGPRPRRWR*ELGSPCEASAPLCR
Trigger: GCGGCACAGAGGAGCGCTCGCTTCACAAGGTGACCCTAGCTCCCACCGCCACCGCCGCGGTCGCGGTCCAGACCGCGCTCCAGCAGCTCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000496902.7
CDS-3UTR CAA 90 bp GCCGCGGGTAGGGCTGCGACAGCACGCGGAACGTGTCGAGCGGGCGCAGCGAGCGTCCGAGCTACTGGGTaGCCCCTGTCCGGAGAGGCT +
Preference number: 5 (lower is better)
Translates to: AAGRAATARGTCRAGAASVRATG*PLSGEA
Trigger: AGCCTCTCCGGACAGGGGCAACCCAGTAGCTCGGAC...GCTCGCTGCGCCCGCTCGACACGTTCCGCGTGCTGTCGCAGCCCTACCCGCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222761.7
CDS TCA 90 bp TGGACCGCGACCGCGGCGGTGGCGGTGGGAGCTAGGGTCACCTTGTaGAGCGAGCGCTCCTCTGTGCCGCACCGCCTCTGGGAGGAAGCC +
Preference number: 5 (lower is better)
Translates to: WTATAAVAVGARVTL*SERSSVPHRLWEEA
Trigger: GGCTTCCTCCCAGAGGCGGTGCGGCACAGAGGAGCGCTCGCTTCACAAGGTGACCCTAGCTCCCACCGCCACCGCCGCGGTCGCGGTCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222761.7
CDS GCA 90 bp CGGTGCGGTAACGACGCATCTGGTCACTGGCGCTGCACGCCAGGGTaGCTTGCGAGCCGCCCCCACCACTGCCGCCGTTGCTCTTGGGGG +
Preference number: 5 (lower is better)
Translates to: RCGNDASGHWRCTPG*LASRPHHCRRCSWG
Trigger: CCCCCAAGAGCAACGGCGGCAGTGGTGGGGGCGGCTCGCAAGGCACCCTGGCGTGCAGCGCCAGTGACCAGATGCGTCGTTACCGCACCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222761.7
ENST00000496902.7
ENST00000580535.1
CDS-3UTR CAA 90 bp GAGGAGGCCTTGCTGAGCACCGAGGGCGCGAAGGTGAGGAAGGAGTCCGAGCGGGCACGCCAGGGTGCCTaGCGAGCCGCCCCCACCACT +
Preference number: 5 (lower is better)
Translates to: EEALLSTEGAKVRKESERARQGA*RAAPTT
Trigger: AGTGGTGGGGGCGGCTCGCAAGGCACCCTGGCGTGC...CCGCTCGGACTCCTTCCTCACCTTCGCGCCCTCGGTGCTCAGCAAGGCCTCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000580535.1
CDS GCA 90 bp CTAACCCCGGCTCCCTGGGTCTCCAGCGGCCGGACGGATCTTGGTTaGAAGAGGGAGAAAGAAAGGCCGGGTGCCTGGGAGGGCGCGGAG +
Preference number: 5 (lower is better)
Translates to: LTPAPWVSSGRTDLG*KREKERPGAWEGAE
Trigger: CTCCGCGCCCTCCCAGGCACCCGGCCTTTCTTTCTCCCTCTTGCAACCAAGATCCGTCCGGCCGCTGGAGACCCAGGGAGCCGGGGTTAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000496902.7
CDS GCA 90 bp CACTGCCGCCGTTGCTCTTGGGGGTCTCGCTCCCTCCGTTCGGACTaGCGACCAGCGCCTCGGAGCCGGACCCTTTGCTGTGCTGGTACT +
Preference number: 5 (lower is better)
Translates to: HCRRCSWGSRSLRSD*RPAPRSRTLCCAGT
Trigger: AGTACCAGCACAGCAAAGGGTCCGGCTCCGAGGCGCTGGTCGGCAGTCCGAACGGAGGGAGCGAGACCCCCAAGAGCAACGGCGGCAGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR CAA 90 bp CTGCGACAGCACGCGGAACGTGTCGAGCGGGCGCAGCGAGCCGCTGAAGGGCGAGCGGCCGGACGGATCTaGGTTGCAAGAGGGAGAAAG +
Preference number: 5 (lower is better)
Translates to: LRQHAERVERAQRAAEGRAAGRI*VARGRK
Trigger: CTTTCTCCCTCTTGCAACCAAGATCCGTCCGGCCGC...TCGCCCTTCAGCGGCTCGCTGCGCCCGCTCGACACGTTCCGCGTGCTGTCGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222761.7
CDS-3UTR CAA 90 bp GGTGCTGGCAGACGCCAGACCCAGAAGATGCTGTGTAGTCGAGGCTCCAGGTCCGCGACGGAGGAGGCCTaGCTGAGCACCGAGGGCGCG +
Preference number: 5 (lower is better)
Translates to: GAGRRQTQKMLCSRGSRSATEEA*LSTEGA
Trigger: CGCGCCCTCGGTGCTCAGCAAGGCCTCCTCCGTCGC...GGACCTGGAGCCTCGACTACACAGCATCTTCTGGGTCTGGCGTCTGCCAGCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS CCA 90 bp GTTCCTAACCCCGGCTCCCTGGGTCTCCAGCGGCCGGACGGATCTTaGTTGCAAGAGGGAGAAAGAAAGGCCGGGTGCCTGGGAGGGCGC +
Preference number: 5 (lower is better)
Translates to: VPNPGSLGLQRPDGS*LQEGERKAGCLGGR
Trigger: GCGCCCTCCCAGGCACCCGGCCTTTCTTTCTCCCTCTTGCAACCAAGATCCGTCCGGCCGCTGGAGACCCAGGGAGCCGGGGTTAGGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000496902.7
CDS-3UTR CAA 90 bp GAGCGGGAGGTGGAGGCACAGGTGAAGTCCGAGGCGGCGGCAGCCCGGGGCGCCCGGCTTCGGACAAATTaGAGACTCTCTTGCCAACCA +
Preference number: 5 (lower is better)
Translates to: EREVEAQVKSEAAAARGARLRTN*RLSCQP
Trigger: TGGTTGGCAAGAGAGTCTCAAATTTGTCCGAAGCCG...GGCGCCCCGGGCTGCCGCCGCCTCGGACTTCACCTGTGCCTCCACCTCCCGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222761.7
CDS GCA 90 bp CACTGCCGCCGTTGCTCTTGGGGGTCTCGCTCCCTCCGTTCGGACTaGCGACCAGCGCCTCGGAGCCGGACCCTTAGTATATGTGAGTGG +
Preference number: 5 (lower is better)
Translates to: HCRRCSWGSRSLRSD*RPAPRSRTLSICEW
Trigger: CCACTCACATATACTAAGGGTCCGGCTCCGAGGCGCTGGTCGGCAGTCCGAACGGAGGGAGCGAGACCCCCAAGAGCAACGGCGGCAGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580535.1
CDS-3UTR CAA 90 bp CAGCCCGGGGCGCCAGCCCGTTGGCCGGGCCGCTGTGACAGGCGAGGCAGGAGCGGGACTGGATATTGGTaGCTGTTGCTGCTAAGTTTT +
Preference number: 5 (lower is better)
Translates to: QPGAPARWPGRCDRRGRSGTGYW*LLLLSF
Trigger: AAAACTTAGCAGCAACAGCAACCAATATCCAGTCCC...GCTCCTGCCTCGCCTGTCACAGCGGCCCGGCCAACGGGCTGGCGCCCCGGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580535.1
CDS-3UTR CAA 90 bp CAGCGCGACGGAGGAGGCCTTGCTGAGCACCGAGGGCGCGAAGGTGAGGAAGGATTCCCTTTCCAGTGCTaGGGCCTTGGCTGGGGAGAG +
Preference number: 5 (lower is better)
Translates to: QRDGGGLAEHRGREGEEGFPFQC*GLGWGE
Trigger: CTCTCCCCAGCCAAGGCCCAAGCACTGGAAAGGGAA...TCCTTCCTCACCTTCGCGCCCTCGGTGCTCAGCAAGGCCTCCTCCGTCGCGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580535.1
CDS TCA 90 bp CTCGGGCGGCTCCGGCAGCGGGCTGCCCACGGCTTCGGACAAATTTaGGACTCTCTTGCCAACCAGAGTGCCAAGCTGACCCCCATCCAG +
Preference number: 5 (lower is better)
Translates to: LGRLRQRAAHGFGQI*DSLANQSAKLTPIQ
Trigger: CTGGATGGGGGTCAGCTTGGCACTCTGGTTGGCAAGAGAGTCTCAAATTTGTCCGAAGCCGTGGGCAGCCCGCTGCCGGAGCCGCCCGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000496902.7
CDS GCA 90 bp CACTGCCGCCGTTGCTCTTGGGGGTCTCGCTCCCTCCGTTCGGACTaGCGACCAGCGCCTCGGAGCCGGACCCTCGATTTCTTCATAGAA +
Preference number: 5 (lower is better)
Translates to: HCRRCSWGSRSLRSD*RPAPRSRTLDFFIE
Trigger: TTCTATGAAGAAATCGAGGGTCCGGCTCCGAGGCGCTGGTCGGCAGTCCGAACGGAGGGAGCGAGACCCCCAAGAGCAACGGCGGCAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000222761.7
CDS-3UTR CAA 90 bp GCCGCGGGTAGGGCTGCGACAGCACGCGGAACGTGTCGAGCGGGCGCAGCGAGCAAATTTGAGACTCTCTaGCCAACCAGAGTGCCAAGC +
Preference number: 5 (lower is better)
Translates to: AAGRAATARGTCRAGAASKFETL*PTRVPS
Trigger: GCTTGGCACTCTGGTTGGCAAGAGAGTCTCAAATTT...GCTCGCTGCGCCCGCTCGACACGTTCCGCGTGCTGTCGCAGCCCTACCCGCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222761.7
CDS-3UTR CAA 90 bp CTCTGGTCCAGCGCGACGGAGGAGGCCTTGCTGAGCACCGAGGGCGCGAAGGTGTTCTGGAACCACACCTaGATGGTGGTTTCCGGCAGG +
Preference number: 5 (lower is better)
Translates to: LWSSATEEALLSTEGAKVFWNHT*MVVSGR
Trigger: CCTGCCGGAAACCACCATCAAGGTGTGGTTCCAGAA...CACCTTCGCGCCCTCGGTGCTCAGCAAGGCCTCCTCCGTCGCGCTGGACCAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000580535.1
CDS-3UTR CAA 90 bp GGCGGATGCGGCGCCCAGGCCCACCGGCGAGTAGTAGGGCAGGGGCAGGTGCGAAAGTTTTGTTTAGCTTaGGAGCTACAGCCTCGACCC +
Preference number: 5 (lower is better)
Translates to: GGCGAQAHRRVVGQGQVRKFCLA*ELQPRP
Trigger: GGGTCGAGGCTGTAGCTCCAAAGCTAAACAAAACTT...TCGCACCTGCCCCTGCCCTACTACTCGCCGGTGGGCCTGGGCGCCGCATCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580535.1
CDS GCA 90 bp TGGCGGTGGGAGCTAGGGTCACCTTGTGAAGCGAGCGCTCCTCTGTaGCGCACCGCCTCTGGGAGGAAGCCCCATTGCCCTCTTCTTTCT +
Preference number: 5 (lower is better)
Translates to: WRWELGSPCEASAPL*RTASGRKPHCPLLS
Trigger: AGAAAGAAGAGGGCAATGGGGCTTCCTCCCAGAGGCGGTGCGGCACAGAGGAGCGCTCGCTTCACAAGGTGACCCTAGCTCCCACCGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222761.7
CDS GCA 90 bp GGCAACCACGGGGCACCATTTTCTCGGGCGGCTCCGGCAGCGGGCTaGCCACGGCTTCGGACAAATTTGAGACTCTCTTGCCAACCAGAG +
Preference number: 5 (lower is better)
Translates to: GNHGAPFSRAAPAAG*PRLRTNLRLSCQPE
Trigger: CTCTGGTTGGCAAGAGAGTCTCAAATTTGTCCGAAGCCGTGGGCAGCCCGCTGCCGGAGCCGCCCGAGAAAATGGTGCCCCGTGGTTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000496902.7
CDS-3UTR CAA 90 bp GTCGAGGCTCCAGGTCCCATGCCAAGGGGCTGGATTCTCCCTGGTAGTAAATCACTGCCGCCGTTGCTCTaGGGGGTCTCGCTCCCTCCG +
Preference number: 5 (lower is better)
Translates to: VEAPGPMPRGWILPGSKSLPPLL*GVSLPP
Trigger: CGGAGGGAGCGAGACCCCCAAGAGCAACGGCGGCAG...TGATTTACTACCAGGGAGAATCCAGCCCCTTGGCATGGGACCTGGAGCCTCGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS-3UTR CAA 90 bp TTCCTAGGCTTTCCAATTCTTGCGGCCGGATCCCGCTGGTCCTTTTCCGCCCTCCCACCACTGCCGCCGTaGCTCTTGGGGGTCTCGCTC +
Preference number: 5 (lower is better)
Translates to: FLGFPILAAGSRWSFSALPPLPP*LLGVSL
Trigger: GAGCGAGACCCCCAAGAGCAACGGCGGCAGTGGTGG...GAGGGCGGAAAAGGACCAGCGGGATCCGGCCGCAAGAATTGGAAAGCCTAGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS CCA 90 bp GACCCTCGATTTCTTCATAGAAATCCGACTCGGTGTCCGAGCTACTaGGTTGCCCCTGTCCGGAGAGGCTGTCGACTGAGGGGGCCGGGG +
Preference number: 5 (lower is better)
Translates to: DPRFLHRNPTRCPSY*VAPVRRGCRLRGPG
Trigger: CCCCGGCCCCCTCAGTCGACAGCCTCTCCGGACAGGGGCAACCCAGTAGCTCGGACACCGAGTCGGATTTCTATGAAGAAATCGAGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000222761.7
CDS-3UTR CAA 90 bp GGCCTTGCTGAGCACCGAGGGCGCGAAGGTGAGGAAGGAGTCCGAGCGGGAGGTCCGGACGGATCTTGGTaGCAAGAGGGAGAAAGAAAG +
Preference number: 5 (lower is better)
Translates to: GLAEHRGREGEEGVRAGGPDGSW*QEGERK
Trigger: CTTTCTTTCTCCCTCTTGCAACCAAGATCCGTCCGG...ACCTCCCGCTCGGACTCCTTCCTCACCTTCGCGCCCTCGGTGCTCAGCAAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000222761.7
CDS CCA 90 bp TCACCTCGATTTCTTCATAGAAATCCGACTCGGTGTCCGAGCTACTaGGTTGCCCCTGTCCGGAGAGGCTGTCGACTGAGGGGGCCGGGG +
Preference number: 5 (lower is better)
Translates to: SPRFLHRNPTRCPSY*VAPVRRGCRLRGPG
Trigger: CCCCGGCCCCCTCAGTCGACAGCCTCTCCGGACAGGGGCAACCCAGTAGCTCGGACACCGAGTCGGATTTCTATGAAGAAATCGAGGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS CCA 90 bp CCTCGGAGCCGGACCCTTTGCTGTGCTGGTACTCGGCGTTCCCGGTaGCGCAGTCCGGGGTGCAGCTCACCTCGATTTCTTCATAGAAAT +
Preference number: 5 (lower is better)
Translates to: PRSRTLCCAGTRRSR*RSPGCSSPRFLHRN
Trigger: ATTTCTATGAAGAAATCGAGGTGAGCTGCACCCCGGACTGCGCCACCGGGAACGCCGAGTACCAGCACAGCAAAGGGTCCGGCTCCGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS GCA 90 bp CTTTGCTGTGCTGGTACTCGGCGTTCCCGGTGGCGCAGTCCGGGGTaGAGCTCACCTCGATTTCTTCATAGAAATCCGACTCGGTGTCCG +
Preference number: 5 (lower is better)
Translates to: LCCAGTRRSRWRSPG*SSPRFLHRNPTRCP
Trigger: CGGACACCGAGTCGGATTTCTATGAAGAAATCGAGGTGAGCTGCACCCCGGACTGCGCCACCGGGAACGCCGAGTACCAGCACAGCAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR CAA 90 bp CCAGCCCCTTGTCATGCCTTGGAAAAGCTGGCAAAGATTAATCTCTACCTGCTCGCACGCCAGGGTGCCTaGCGAGCCGCCCCCACCACT +
Preference number: 5 (lower is better)
Translates to: PAPCHALEKLAKINLYLLARQGA*RAAPTT
Trigger: AGTGGTGGGGGCGGCTCGCAAGGCACCCTGGCGTGC...GAGCAGGTAGAGATTAATCTTTGCCAGCTTTTCCAAGGCATGACAAGGGGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS-3UTR CAA 90 bp GCCATCCACCAGCCCCTTGTCATGCCTTGGAAAAGCTGGCAAAGATTAATCTCTGCGACGGAGGAGGCCTaGCTGAGCACCGAGGGCGCG +
Preference number: 5 (lower is better)
Translates to: AIHQPLVMPWKSWQRLISATEEA*LSTEGA
Trigger: CGCGCCCTCGGTGCTCAGCAAGGCCTCCTCCGTCGC...AGAGATTAATCTTTGCCAGCTTTTCCAAGGCATGACAAGGGGCTGGTGGATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS-3UTR CAA 90 bp ATCCCCACTCCTGCTCCCCAAACGCGCCAGCCACCGCCACTTCCTAGGCTTTCCCGGCTTCGGACAAATTaGAGACTCTCTTGCCAACCA +
Preference number: 5 (lower is better)
Translates to: IPTPAPQTRQPPPLPRLSRLRTN*RLSCQP
Trigger: TGGTTGGCAAGAGAGTCTCAAATTTGTCCGAAGCCG...GGAAAGCCTAGGAAGTGGCGGTGGCTGGCGCGTTTGGGGAGCAGGAGTGGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR CAA 90 bp CCAGCCCCTTGTCATGCCTTGGAAAAGCTGGCAAAGATTAATCTCTACCTGCTCCTGCCGCCGTTGCTCTaGGGGGTCTCGCTCCCTCCG +
Preference number: 5 (lower is better)
Translates to: PAPCHALEKLAKINLYLLLPPLL*GVSLPP
Trigger: CGGAGGGAGCGAGACCCCCAAGAGCAACGGCGGCAG...GAGCAGGTAGAGATTAATCTTTGCCAGCTTTTCCAAGGCATGACAAGGGGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS GCA 90 bp AGGAAGCCCCATTGCCCTCTTCTTTCTAAGCTGTCATCCTCCTGCTaGAATCGTCATTACAGTACCGCTGGTGACGCCACTCGGCGAGCG +
Preference number: 5 (lower is better)
Translates to: RKPHCPLLSKLSSSC*NRHYSTAGDATRRA
Trigger: CGCTCGCCGAGTGGCGTCACCAGCGGTACTGTAATGACGATTGCAGCAGGAGGATGACAGCTTAGAAAGAAGAGGGCAATGGGGCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222761.7
CDS GCA 90 bp GGGAGGAAGCCCCATTGCCCTCTTCTTTCTAAGCTGTCATCCTCCTaGTGCAATCGTCATTACAGTACCGCTGGTGACGCCACTCGGCGA +
Preference number: 5 (lower is better)
Translates to: GRKPHCPLLSKLSSS*CNRHYSTAGDATRR
Trigger: TCGCCGAGTGGCGTCACCAGCGGTACTGTAATGACGATTGCAGCAGGAGGATGACAGCTTAGAAAGAAGAGGGCAATGGGGCTTCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222761.7
CDS CCA 90 bp TCCACCGCGACACTCACGCTTATTCTCCGGCGGACATATGGTGGCTaGTGTTTCCGCAGTTGGGGAATAATGGAAGCAACCAAGCGGGAG +
Preference number: 5 (lower is better)
Translates to: STATLTLILRRTYGG*CFRSWGIMEATKRE
Trigger: CTCCCGCTTGGTTGCTTCCATTATTCCCCAACTGCGGAAACACCAGCCACCATATGTCCGCCGGAGAATAAGCGTGAGTGTCGCGGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518886.1
CDS-3UTR CAA 90 bp AGGCTCCCACTGGTATCTGAAAGTCAAGCTCCAGTGGTAGCTTGGGAAGAAAATCCACCACTGCCGCCGTaGCTCTTGGGGGTCTCGCTC +
Preference number: 5 (lower is better)
Translates to: RLPLVSESQAPVVAWEENPPLPP*LLGVSL
Trigger: GAGCGAGACCCCCAAGAGCAACGGCGGCAGTGGTGG...ATTTTCTTCCCAAGCTACCACTGGAGCTTGACTTTCAGATACCAGTGGGAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR CAA 90 bp CAGCGCGACGGAGGAGGCCTTGCTGAGCACCGAGGGCGCGAAGGTGAGGAAGGATGCATACACAGCATTTaGTTCAGAGAGACAGCAATT +
Preference number: 5 (lower is better)
Translates to: QRDGGGLAEHRGREGEEGCIHSI*FRETAI
Trigger: AATTGCTGTCTCTCTGAACAAAATGCTGTGTATGCA...TCCTTCCTCACCTTCGCGCCCTCGGTGCTCAGCAAGGCCTCCTCCGTCGCGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580535.1
CDS CCA 90 bp ACGCTTATTCTCCGGCGGACATATGGTGGCTGGTGTTTCCGCAGTTaGGGAATAATGGAAGCAACCAAGCGGGAGAAGCCGCCAGATACC +
Preference number: 5 (lower is better)
Translates to: TLILRRTYGGWCFRS*GIMEATKREKPPDT
Trigger: GGTATCTGGCGGCTTCTCCCGCTTGGTTGCTTCCATTATTCCCCAACTGCGGAAACACCAGCCACCATATGTCCGCCGGAGAATAAGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518886.1
CDS CCA 90 bp ACTGTCCACCGCGACACTCACGCTTATTCTCCGGCGGACATATGGTaGCTGGTGTTTCCGCAGTTGGGGAATAATGGAAGCAACCAAGCG +
Preference number: 5 (lower is better)
Translates to: TVHRDTHAYSPADIW*LVFPQLGNNGSNQA
Trigger: CGCTTGGTTGCTTCCATTATTCCCCAACTGCGGAAACACCAGCCACCATATGTCCGCCGGAGAATAAGCGTGAGTGTCGCGGTGGACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518886.1
CDS-3UTR CAA 90 bp TTGGTTGCTGTTGCTGCTAAGTTTTGTTTAGCTTTGGAGCTACAGCCTCGACCCGTCCGAGCTACTGGGTaGCCCCTGTCCGGAGAGGCT +
Preference number: 5 (lower is better)
Translates to: LVAVAAKFCLALELQPRPVRATG*PLSGEA
Trigger: AGCCTCTCCGGACAGGGGCAACCCAGTAGCTCGGAC...GGGTCGAGGCTGTAGCTCCAAAGCTAAACAAAACTTAGCAGCAACAGCAACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR CAA 90 bp GTCGAGGCTCCAGGTCCCATGCCAAGGGGCTGGATTCTCCCTGGTAGTAAATCACAAATGACTGGTATGTaGCCATCCACCAGCCCCTTG +
Preference number: 5 (lower is better)
Translates to: VEAPGPMPRGWILPGSKSQMTGM*PSTSPL
Trigger: CAAGGGGCTGGTGGATGGCAACATACCAGTCATTTG...TGATTTACTACCAGGGAGAATCCAGCCCCTTGGCATGGGACCTGGAGCCTCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS CCA 90 bp GCAACTGTCCACCGCGACACTCACGCTTATTCTCCGGCGGACATATaGTGGCTGGTGTTTCCGCAGTTGGGGAATAATGGAAGCAACCAA +
Preference number: 5 (lower is better)
Translates to: ATVHRDTHAYSPADI*WLVFPQLGNNGSNQ
Trigger: TTGGTTGCTTCCATTATTCCCCAACTGCGGAAACACCAGCCACCATATGTCCGCCGGAGAATAAGCGTGAGTGTCGCGGTGGACAGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518886.1
CDS-3UTR CAA 90 bp GTATGTTGCCATCCACCAGCCCCTTGTCATGCCTTGGAAAAGCTGGCAAAGATTTTCCCTTTCCAGTGCTaGGGCCTTGGCTGGGGAGAG +
Preference number: 5 (lower is better)
Translates to: VCCHPPAPCHALEKLAKIFPFQC*GLGWGE
Trigger: CTCTCCCCAGCCAAGGCCCAAGCACTGGAAAGGGAA...AATCTTTGCCAGCTTTTCCAAGGCATGACAAGGGGCTGGTGGATGGCAACATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS-3UTR CAA 90 bp CCCCTTGTCATGCCTTGGAAAAGCTGGCAAAGATTAATCTCTACCTGCTCTGCAGCGGCCGGACGGATCTaGGTTGCAAGAGGGAGAAAG +
Preference number: 5 (lower is better)
Translates to: PLVMPWKSWQRLISTCSAAAGRI*VARGRK
Trigger: CTTTCTCCCTCTTGCAACCAAGATCCGTCCGGCCGC...TGCAGAGCAGGTAGAGATTAATCTTTGCCAGCTTTTCCAAGGCATGACAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR CAA 90 bp GACAGAAGGCTCCCACTGGTATCTGAAAGTCAAGCTCCAGTGGTAGCTTGGGAATTCTGGAACCACACCTaGATGGTGGTTTCCGGCAGG +
Preference number: 5 (lower is better)
Translates to: DRRLPLVSESQAPVVAWEFWNHT*MVVSGR
Trigger: CCTGCCGGAAACCACCATCAAGGTGTGGTTCCAGAA...TTCCCAAGCTACCACTGGAGCTTGACTTTCAGATACCAGTGGGAGCCTTCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR CAA 90 bp ATGCCTTGGAAAAGCTGGCAAAGATTAATCTCTACCTGCTCTGCATACACAGCATCGGAGCCGGACCCTTaGCTGTGCTGGTACTCGGCG +
Preference number: 5 (lower is better)
Translates to: MPWKSWQRLISTCSAYTASEPDP*LCWYSA
Trigger: CGCCGAGTACCAGCACAGCAAAGGGTCCGGCTCCGA...TGCTGTGTATGCAGAGCAGGTAGAGATTAATCTTTGCCAGCTTTTCCAAGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS CCA 90 bp TATGGAGAGGATGCTAAGATCCCTACTTTGAGAATGCCATCCGTCTaGACACCTTTGGCGGCAACTGTCCACCGCGACACTCACGCTTAT +
Preference number: 5 (lower is better)
Translates to: YGEDAKIPTLRMPSV*TPLAATVHRDTHAY
Trigger: ATAAGCGTGAGTGTCGCGGTGGACAGTTGCCGCCAAAGGTGTCCAGACGGATGGCATTCTCAAAGTAGGGATCTTAGCATCCTCTCCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518886.1
CDS-3UTR CAA 90 bp GTATGTTGCCATCCACCAGCCCCTTGTCATGCCTTGGAAAAGCTGGCAAAGATTTTCTGGAACCACACCTaGATGGTGGTTTCCGGCAGG +
Preference number: 5 (lower is better)
Translates to: VCCHPPAPCHALEKLAKIFWNHT*MVVSGR
Trigger: CCTGCCGGAAACCACCATCAAGGTGTGGTTCCAGAA...AATCTTTGCCAGCTTTTCCAAGGCATGACAAGGGGCTGGTGGATGGCAACATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS-3UTR CAA 90 bp GCCATCCACCAGCCCCTTGTCATGCCTTGGAAAAGCTGGCAAAGATTAATCTCTCCATCCACCAGCCCCTaGTCATGCCTTGGAAAAGCT +
Preference number: 5 (lower is better)
Translates to: AIHQPLVMPWKSWQRLISPSTSP*SCLGKA
Trigger: AGCTTTTCCAAGGCATGACAAGGGGCTGGTGGATGG...AGAGATTAATCTTTGCCAGCTTTTCCAAGGCATGACAAGGGGCTGGTGGATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS-3UTR CAA 90 bp AGGCTCCCACTGGTATCTGAAAGTCAAGCTCCAGTGGTAGCTTGGGAAGAAAATTCTTCCCTGGGCGCCTaGTTAACAGCTCAGCTCTGG +
Preference number: 5 (lower is better)
Translates to: RLPLVSESQAPVVAWEENSSLGA*LTAQLW
Trigger: CCAGAGCTGAGCTGTTAACAAGGCGCCCAGGGAAGA...ATTTTCTTCCCAAGCTACCACTGGAGCTTGACTTTCAGATACCAGTGGGAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR CAA 90 bp CCAGCCCCTTGTCATGCCTTGGAAAAGCTGGCAAAGATTAATCTCTACCTGCTCCCTCGCACACATCACTaGCTAATCAGGGTGTGTGCT +
Preference number: 5 (lower is better)
Translates to: PAPCHALEKLAKINLYLLPRTHH*LIRVCA
Trigger: AGCACACACCCTGATTAGCAAGTGATGTGTGCGAGG...GAGCAGGTAGAGATTAATCTTTGCCAGCTTTTCCAAGGCATGACAAGGGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR CAA 90 bp GACAGAAGGCTCCCACTGGTATCTGAAAGTCAAGCTCCAGTGGTAGCTTGGGAAGGGACTGGATATTGGTaGCTGTTGCTGCTAAGTTTT +
Preference number: 5 (lower is better)
Translates to: DRRLPLVSESQAPVVAWEGTGYW*LLLLSF
Trigger: AAAACTTAGCAGCAACAGCAACCAATATCCAGTCCC...TTCCCAAGCTACCACTGGAGCTTGACTTTCAGATACCAGTGGGAGCCTTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR CAA 90 bp ATGCCTTGGAAAAGCTGGCAAAGATTAATCTCTACCTGCTCTGCATACACAGCACCATCCACCAGCCCCTaGTCATGCCTTGGAAAAGCT +
Preference number: 5 (lower is better)
Translates to: MPWKSWQRLISTCSAYTAPSTSP*SCLGKA
Trigger: AGCTTTTCCAAGGCATGACAAGGGGCTGGTGGATGG...TGCTGTGTATGCAGAGCAGGTAGAGATTAATCTTTGCCAGCTTTTCCAAGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS-3UTR CAA 90 bp CTTGTCATGCCTTGGAAAAGCTGGCAAAGATTAATCTCTACCTGCTCTGCATACCCGGACGGATCTTGGTaGCAAGAGGGAGAAAGAAAG +
Preference number: 5 (lower is better)
Translates to: LVMPWKSWQRLISTCSAYPDGSW*QEGERK
Trigger: CTTTCTTTCTCCCTCTTGCAACCAAGATCCGTCCGG...GTATGCAGAGCAGGTAGAGATTAATCTTTGCCAGCTTTTCCAAGGCATGACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR CAA 90 bp CCCCTTGTCATGCCTTGGAAAAGCTGGCAAAGATTAATCTCTACCTGCTCTGCAAAGTTTTGTTTAGCTTaGGAGCTACAGCCTCGACCC +
Preference number: 5 (lower is better)
Translates to: PLVMPWKSWQRLISTCSAKFCLA*ELQPRP
Trigger: GGGTCGAGGCTGTAGCTCCAAAGCTAAACAAAACTT...TGCAGAGCAGGTAGAGATTAATCTTTGCCAGCTTTTCCAAGGCATGACAAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS-3UTR CAA 90 bp CTTGTCATGCCTTGGAAAAGCTGGCAAAGATTAATCTCTACCTGCTCTGCATACCAAATGACTGGTATGTaGCCATCCACCAGCCCCTTG +
Preference number: 5 (lower is better)
Translates to: LVMPWKSWQRLISTCSAYQMTGM*PSTSPL
Trigger: CAAGGGGCTGGTGGATGGCAACATACCAGTCATTTG...GTATGCAGAGCAGGTAGAGATTAATCTTTGCCAGCTTTTCCAAGGCATGACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000496902.7
ENST00000580535.1
CDS-3UTR CAA 90 bp AAGAACCACTCCCTCTCAGTCAGGGTGAAGCTTGCATTGGGGTTACACGTTCTCTGCATACACAGCATTTaGTTCAGAGAGACAGCAATT +
Preference number: 5 (lower is better)
Translates to: KNHSLSVRVKLALGLHVLCIHSI*FRETAI
Trigger: AATTGCTGTCTCTCTGAACAAAATGCTGTGTATGCA...GAGAACGTGTAACCCCAATGCAAGCTTCACCCTGACTGAGAGGGAGTGGTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR CAA 90 bp CAAATCAAACCAAATTCATTCCCTACAGGAAGAACCACTCCCTCTCAGTCAGGGTGTGGGAGTGAGGATTaGGGAGTGGCTCTAAACAAA +
Preference number: 5 (lower is better)
Translates to: QIKPNSFPTGRTTPSQSGCGSED*GVALNK
Trigger: TTTGTTTAGAGCCACTCCCAAATCCTCACTCCCACA...CCCTGACTGAGAGGGAGTGGTTCTTCCTGTAGGGAATGAATTTGGTTTGATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS-3UTR CAA 90 bp CCCCTTGTCATGCCTTGGAAAAGCTGGCAAAGATTAATCTCTACCTGCTCTGCAATAACAGCAAGTTCTTaGGGCTTCAAAGGAAAACCC +
Preference number: 5 (lower is better)
Translates to: PLVMPWKSWQRLISTCSAITASS*GFKGKP
Trigger: GGGTTTTCCTTTGAAGCCCAAAGAACTTGCTGTTAT...TGCAGAGCAGGTAGAGATTAATCTTTGCCAGCTTTTCCAAGGCATGACAAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS GCA 72 bp TGCACGCCAGGGTGCCTTGCGAGCCGCCCCCACCACTaGCGCCGTTGCTCTTGGGGGTCTCGCTCCCTCCGT +
Preference number: 6 (lower is better)
Translates to: CTPGCLASRPHH*RRCSWGSRSLR
Trigger: ACGGAGGGAGCGAGACCCCCAAGAGCAACGGCGGCAGTGGTGGGGGCGGCTCGCAAGGCACCCTGGCGTGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000222761.7
ENST00000496902.7
ENST00000580535.1
CDS CCA 72 bp GGAGCGCGGTCTGGACCGCGACCGCGGCGGTGGCGGTaGGAGCTAGGGTCACCTTGTGAAGCGAGCGCTCCT +
Preference number: 6 (lower is better)
Translates to: GARSGPRPRRWR*ELGSPCEASAP
Trigger: AGGAGCGCTCGCTTCACAAGGTGACCCTAGCTCCCACCGCCACCGCCGCGGTCGCGGTCCAGACCGCGCTCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000496902.7
CDS CCA 72 bp GCTGCTGGAGCGCGGTCTGGACCGCGACCGCGGCGGTaGCGGTGGGAGCTAGGGTCACCTTGTGAAGCGAGC +
Preference number: 6 (lower is better)
Translates to: AAGARSGPRPRR*RWELGSPCEAS
Trigger: GCTCGCTTCACAAGGTGACCCTAGCTCCCACCGCCACCGCCGCGGTCGCGGTCCAGACCGCGCTCCAGCAGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000496902.7
CDS GCA 72 bp CGCATCTGGTCACTGGCGCTGCACGCCAGGGTGCCTTaGGAGCCGCCCCCACCACTGCCGCCGTTGCTCTTG +
Preference number: 6 (lower is better)
Translates to: RIWSLALHARVP*EPPPPLPPLLL
Trigger: CAAGAGCAACGGCGGCAGTGGTGGGGGCGGCTCGCAAGGCACCCTGGCGTGCAGCGCCAGTGACCAGATGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222761.7
ENST00000496902.7
ENST00000580535.1
CDS GCA 72 bp AGGCGGTGCGGTAACGACGCATCTGGTCACTGGCGCTaGACGCCAGGGTGCCTTGCGAGCCGCCCCCACCAC +
Preference number: 6 (lower is better)
Translates to: RRCGNDASGHWR*TPGCLASRPHH
Trigger: GTGGTGGGGGCGGCTCGCAAGGCACCCTGGCGTGCAGCGCCAGTGACCAGATGCGTCGTTACCGCACCGCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222761.7
ENST00000496902.7
ENST00000580535.1
CDS CAA 90 bp GCGGTAACGACGCATCTGGTCACTGGCGCTGCACGCCAGGGTGCCTaGCGAGCCGCCCCCACCACTGCCGCCGTTGCTCTTGGGGGTCTC +
Preference number: 6 (lower is better)
Translates to: AVTTHLVTGAARQGA*RAAPTTAAVALGGL
Trigger: GAGACCCCCAAGAGCAACGGCGGCAGTGGTGGGGGCGGCTCGCAAGGCACCCTGGCGTGCAGCGCCAGTGACCAGATGCGTCGTTACCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000222761.7
ENST00000496902.7
ENST00000580535.1
CDS CAA 72 bp ACGCATCTGGTCACTGGCGCTGCACGCCAGGGTGCCTaGCGAGCCGCCCCCACCACTGCCGCCGTTGCTCTT +
Preference number: 6 (lower is better)
Translates to: THLVTGAARQGA*RAAPTTAAVAL
Trigger: AAGAGCAACGGCGGCAGTGGTGGGGGCGGCTCGCAAGGCACCCTGGCGTGCAGCGCCAGTGACCAGATGCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222761.7
ENST00000496902.7
ENST00000580535.1
CDS CAA 90 bp CCTAACCCCGGCTCCCTGGGTCTCCAGCGGCCGGACGGATCTTGGTaGCAAGAGGGAGAAAGAAAGGCCGGGTGCCTGGGAGGGCGCGGA +
Preference number: 6 (lower is better)
Translates to: PNPGSLGLQRPDGSW*QEGERKAGCLGGRG
Trigger: TCCGCGCCCTCCCAGGCACCCGGCCTTTCTTTCTCCCTCTTGCAACCAAGATCCGTCCGGCCGCTGGAGACCCAGGGAGCCGGGGTTAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000496902.7
CDS GCA 72 bp CGTTGCTCTTGGGGGTCTCGCTCCCTCCGTTCGGACTaGCGACCAGCGCCTCGGAGCCGGACCCTCGATTTC +
Preference number: 6 (lower is better)
Translates to: RCSWGSRSLRSD*RPAPRSRTLDF
Trigger: GAAATCGAGGGTCCGGCTCCGAGGCGCTGGTCGGCAGTCCGAACGGAGGGAGCGAGACCCCCAAGAGCAACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000222761.7
CDS GCA 72 bp CGTTGCTCTTGGGGGTCTCGCTCCCTCCGTTCGGACTaGCGACCAGCGCCTCGGAGCCGGACCCTTTGCTGT +
Preference number: 6 (lower is better)
Translates to: RCSWGSRSLRSD*RPAPRSRTLCC
Trigger: ACAGCAAAGGGTCCGGCTCCGAGGCGCTGGTCGGCAGTCCGAACGGAGGGAGCGAGACCCCCAAGAGCAACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS CCA 72 bp CCCGGCTCCCTGGGTCTCCAGCGGCCGGACGGATCTTaGTTGCAAGAGGGAGAAAGAAAGGCCGGGTGCCTG +
Preference number: 6 (lower is better)
Translates to: PGSLGLQRPDGS*LQEGERKAGCL
Trigger: CAGGCACCCGGCCTTTCTTTCTCCCTCTTGCAACCAAGATCCGTCCGGCCGCTGGAGACCCAGGGAGCCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000496902.7
CDS GCA 72 bp GAGCTAGGGTCACCTTGTGAAGCGAGCGCTCCTCTGTaGCGCACCGCCTCTGGGAGGAAGCCCCATTGCCCT +
Preference number: 6 (lower is better)
Translates to: ELGSPCEASAPL*RTASGRKPHCP
Trigger: AGGGCAATGGGGCTTCCTCCCAGAGGCGGTGCGGCACAGAGGAGCGCTCGCTTCACAAGGTGACCCTAGCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222761.7
CDS GCA 72 bp CGTTGCTCTTGGGGGTCTCGCTCCCTCCGTTCGGACTaGCGACCAGCGCCTCGGAGCCGGACCCTTAGTATA +
Preference number: 6 (lower is better)
Translates to: RCSWGSRSLRSD*RPAPRSRTLSI
Trigger: TATACTAAGGGTCCGGCTCCGAGGCGCTGGTCGGCAGTCCGAACGGAGGGAGCGAGACCCCCAAGAGCAACG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580535.1
CDS GCA 72 bp GGGGCACCATTTTCTCGGGCGGCTCCGGCAGCGGGCTaGCCACGGCTTCGGACAAATTTGAGACTCTCTTGC +
Preference number: 6 (lower is better)
Translates to: GAPFSRAAPAAG*PRLRTNLRLSC
Trigger: GCAAGAGAGTCTCAAATTTGTCCGAAGCCGTGGGCAGCCCGCTGCCGGAGCCGCCCGAGAAAATGGTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000496902.7
CDS CCA 72 bp CGGACCCTTTGCTGTGCTGGTACTCGGCGTTCCCGGTaGCGCAGTCCGGGGTGCAGCTCACCTCGATTTCTT +
Preference number: 6 (lower is better)
Translates to: RTLCCAGTRRSR*RSPGCSSPRFL
Trigger: AAGAAATCGAGGTGAGCTGCACCCCGGACTGCGCCACCGGGAACGCCGAGTACCAGCACAGCAAAGGGTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS CAA 90 bp TCTCGGGCGGCTCCGGCAGCGGGCTGCCCACGGCTTCGGACAAATTaGAGACTCTCTTGCCAACCAGAGTGCCAAGCTGACCCCCATCCA +
Preference number: 6 (lower is better)
Translates to: SRAAPAAGCPRLRTN*RLSCQPECQADPHP
Trigger: TGGATGGGGGTCAGCTTGGCACTCTGGTTGGCAAGAGAGTCTCAAATTTGTCCGAAGCCGTGGGCAGCCCGCTGCCGGAGCCGCCCGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000496902.7
CDS GCA 72 bp GCTGGTACTCGGCGTTCCCGGTGGCGCAGTCCGGGGTaGAGCTCACCTCGATTTCTTCATAGAAATCCGACT +
Preference number: 6 (lower is better)
Translates to: AGTRRSRWRSPG*SSPRFLHRNPT
Trigger: AGTCGGATTTCTATGAAGAAATCGAGGTGAGCTGCACCCCGGACTGCGCCACCGGGAACGCCGAGTACCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496902.7
CDS CCA 72 bp CTCCGGCGGACATATGGTGGCTGGTGTTTCCGCAGTTaGGGAATAATGGAAGCAACCAAGCGGGAGAAGCCG +
Preference number: 6 (lower is better)
Translates to: LRRTYGGWCFRS*GIMEATKREKP
Trigger: CGGCTTCTCCCGCTTGGTTGCTTCCATTATTCCCCAACTGCGGAAACACCAGCCACCATATGTCCGCCGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518886.1
CDS CCA 72 bp TTTCTTCATAGAAATCCGACTCGGTGTCCGAGCTACTaGGTTGCCCCTGTCCGGAGAGGCTGTCGACTGAGG +
Preference number: 6 (lower is better)
Translates to: FLHRNPTRCPSY*VAPVRRGCRLR
Trigger: CCTCAGTCGACAGCCTCTCCGGACAGGGGCAACCCAGTAGCTCGGACACCGAGTCGGATTTCTATGAAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222761.7
ENST00000496902.7
CDS CAA 72 bp TCTCCGGCGGACATATGGTGGCTGGTGTTTCCGCAGTaGGGGAATAATGGAAGCAACCAAGCGGGAGAAGCC +
Preference number: 6 (lower is better)
Translates to: SPADIWWLVFPQ*GNNGSNQAGEA
Trigger: GGCTTCTCCCGCTTGGTTGCTTCCATTATTCCCCAACTGCGGAAACACCAGCCACCATATGTCCGCCGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518886.1
CDS CAA 90 bp CACGCTTATTCTCCGGCGGACATATGGTGGCTGGTGTTTCCGCAGTaGGGGAATAATGGAAGCAACCAAGCGGGAGAAGCCGCCAGATAC +
Preference number: 6 (lower is better)
Translates to: HAYSPADIWWLVFPQ*GNNGSNQAGEAARY
Trigger: GTATCTGGCGGCTTCTCCCGCTTGGTTGCTTCCATTATTCCCCAACTGCGGAAACACCAGCCACCATATGTCCGCCGGAGAATAAGCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518886.1
CDS CAA 90 bp GATGCTAAGATCCCTACTTTGAGAATGCCATCCGTCTGGACACCTTaGGCGGCAACTGTCCACCGCGACACTCACGCTTATTCTCCGGCG +
Preference number: 6 (lower is better)
Translates to: DAKIPTLRMPSVWTP*AATVHRDTHAYSPA
Trigger: CGCCGGAGAATAAGCGTGAGTGTCGCGGTGGACAGTTGCCGCCAAAGGTGTCCAGACGGATGGCATTCTCAAAGTAGGGATCTTAGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518886.1
CDS CCA 72 bp CGCGACACTCACGCTTATTCTCCGGCGGACATATGGTaGCTGGTGTTTCCGCAGTTGGGGAATAATGGAAGC +
Preference number: 6 (lower is better)
Translates to: RDTHAYSPADIW*LVFPQLGNNGS
Trigger: GCTTCCATTATTCCCCAACTGCGGAAACACCAGCCACCATATGTCCGCCGGAGAATAAGCGTGAGTGTCGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518886.1
CDS CCA 72 bp CACCGCGACACTCACGCTTATTCTCCGGCGGACATATaGTGGCTGGTGTTTCCGCAGTTGGGGAATAATGGA +
Preference number: 6 (lower is better)
Translates to: HRDTHAYSPADI*WLVFPQLGNNG
Trigger: TCCATTATTCCCCAACTGCGGAAACACCAGCCACCATATGTCCGCCGGAGAATAAGCGTGAGTGTCGCGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518886.1
CDS CCA 72 bp GATGCTAAGATCCCTACTTTGAGAATGCCATCCGTCTaGACACCTTTGGCGGCAACTGTCCACCGCGACACT +
Preference number: 6 (lower is better)
Translates to: DAKIPTLRMPSV*TPLAATVHRDT
Trigger: AGTGTCGCGGTGGACAGTTGCCGCCAAAGGTGTCCAGACGGATGGCATTCTCAAAGTAGGGATCTTAGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518886.1
CDS CAA 72 bp ATCCCTACTTTGAGAATGCCATCCGTCTGGACACCTTaGGCGGCAACTGTCCACCGCGACACTCACGCTTAT +
Preference number: 6 (lower is better)
Translates to: IPTLRMPSVWTP*AATVHRDTHAY
Trigger: ATAAGCGTGAGTGTCGCGGTGGACAGTTGCCGCCAAAGGTGTCCAGACGGATGGCATTCTCAAAGTAGGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518886.1
CDS CCA 72 bp ACACTCACGCTTATTCTCCGGCGGACATATGGTGGCTaGTGTTTCCGCAGTTGGGGAATAATGGAAGCAACC +
Preference number: 6 (lower is better)
Translates to: TLTLILRRTYGG*CFRSWGIMEAT
Trigger: GGTTGCTTCCATTATTCCCCAACTGCGGAAACACCAGCCACCATATGTCCGCCGGAGAATAAGCGTGAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518886.1
CDS CAA 90 bp CATTCTTGGGTGATGATGTATGGAGAGGATGCTAAGATCCCTACTTaGAGAATGCCATCCGTCTGGACACCTTTGGCGGCAACTGTCCAC +
Preference number: 6 (lower is better)
Translates to: HSWVMMYGEDAKIPT*RMPSVWTPLAATVH
Trigger: GTGGACAGTTGCCGCCAAAGGTGTCCAGACGGATGGCATTCTCAAAGTAGGGATCTTAGCATCCTCTCCATACATCATCACCCAAGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518886.1
CDS CAA 72 bp GTGATGATGTATGGAGAGGATGCTAAGATCCCTACTTaGAGAATGCCATCCGTCTGGACACCTTTGGCGGCA +
Preference number: 6 (lower is better)
Translates to: VMMYGEDAKIPT*RMPSVWTPLAA
Trigger: TGCCGCCAAAGGTGTCCAGACGGATGGCATTCTCAAAGTAGGGATCTTAGCATCCTCTCCATACATCATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518886.1
CDS CCA 72 bp AGGAGGGGGTTGATAATTAGAGAAATGCCAATTTTGTaGCCTCAACCTCCTTTCTCTCCTATCTGTAACCCC +
Preference number: 6 (lower is better)
Translates to: RRGLIIREMPIL*PQPPFSPICNP
Trigger: GGGGTTACAGATAGGAGAGAAAGGAGGTTGAGGCCACAAAATTGGCATTTCTCTAATTATCAACCCCCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518886.1
CDS CAA 72 bp TGGAGGAGGGGGTTGATAATTAGAGAAATGCCAATTTaGTGGCCTCAACCTCCTTTCTCTCCTATCTGTAAC +
Preference number: 6 (lower is better)
Translates to: WRRGLIIREMPI*WPQPPFSPICN
Trigger: GTTACAGATAGGAGAGAAAGGAGGTTGAGGCCACAAAATTGGCATTTCTCTAATTATCAACCCCCTCCTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518886.1