RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EVI5 (Homo sapiens)

Ensembl gene IDs: ENSG00000067208

Ensembl transcript IDs: ENST00000370331.5, ENST00000466778.2, ENST00000468580.5, ENST00000474806.1, ENST00000491940.5, ENST00000492513.5, ENST00000492613.1, ENST00000540033.2, ENST00000684568.1

Found 227 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTAGGCTACCTGGGCCATATGGTCTCCCTTGCAATGACTCAACTCTaGTACTGTAGCACAAAGCGGCCATACACAATATTTAAAAGGGTG +
Preference number: 1 (lower is better)
Translates to: LGYLGHMVSLAMTQL*YCSTKRPYTIFKRV
Trigger: CACCCTTTTAAATATTGTGTATGGCCGCTTTGTGCTACAGTAGCAGAGTTGAGTCATTGCAAGGGAGACCATATGGCCCAGGTAGCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
3UTR CCA 90 bp TGTGGCCATGCATCATCTCACTTCACTTGGACATTGATAGCTTTCTaGGCTGATAGTATAGAACTCCGAACAAAAATCCCCAAAGCACAA +
Preference number: 1 (lower is better)
Translates to: CGHASSHFTWTLIAF*ADSIELRTKIPKAQ
Trigger: TTGTGCTTTGGGGATTTTTGTTCGGAGTTCTATACTATCAGCCCAGAAAGCTATCAATGTCCAAGTGAAGTGAGATGATGCATGGCCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
3UTR CCA 90 bp TCCAGATCATTCAGATTTCTTGATGTGAGGGTCAAAGCAATAATGTaGCCATGCATCATCTCACTTCACTTGGACATTGATAGCTTTCTG +
Preference number: 1 (lower is better)
Translates to: SRSFRFLDVRVKAIM*PCIISLHLDIDSFL
Trigger: CAGAAAGCTATCAATGTCCAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAGAAATCTGAATGATCTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
3UTR CCA 90 bp AAGGAGTCAAACCAAGGCATAATATCCTATTGCATCCTAAAGGCCTaGGAGATTTTAAACTCTTCTAAGGTGTATTTGAATCAGATCTTC +
Preference number: 1 (lower is better)
Translates to: KESNQGIISYCILKA*EILNSSKVYLNQIF
Trigger: GAAGATCTGATTCAAATACACCTTAGAAGAGTTTAAAATCTCCCAGGCCTTTAGGATGCAATAGGATATTATGCCTTGGTTTGACTCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
3UTR-3UTR TCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTGCACTCCAGCCTGGGTaGCAGACTGAATCTCTGTCT +
Preference number: 2 (lower is better)
Translates to: GKQIATKTLLESLVHNVPALQPG*QTESLS
Trigger: AGACAGAGATTCAGTCTGTCACCCAGGCTGGAGTGC...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
3UTR-3UTR GCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTCTGGGAGGCGGAGGTTaGAGTGAGCTAAGATCACAC +
Preference number: 2 (lower is better)
Translates to: GKQIATKTLLESLVHNVPLGGGG*SELRSH
Trigger: GTGTGATCTTAGCTCACTGCAACCTCCGCCTCCCAG...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
3UTR-3UTR GCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGCTGGGAGGCGGAGGTTaGAGTGAGCTAAGATCACAC +
Preference number: 2 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLLGGGG*SELRSH
Trigger: GTGTGATCTTAGCTCACTGCAACCTCCGCCTCCCAG...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
3UTR-3UTR GCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGGCACTCCAGCCTGAGTaGAGTGAGACTTCATCTCAA +
Preference number: 2 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLALQPE*SETSSQ
Trigger: TTGAGATGAAGTCTCACTGCACTCAGGCTGGAGTGC...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
3UTR-3UTR CCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTAAAATTAGCCAGGCGTaGTGGTGCGCACATATAGTC +
Preference number: 2 (lower is better)
Translates to: GKQIATKTLLESLVHNVPKISQA*WCAHIV
Trigger: GACTATATGTGCGCACCACCACGCCTGGCTAATTTT...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
3UTR-3UTR TCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGGCCTGGACAACACAGTaGGACACCTGTCTCTATATT +
Preference number: 2 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLAWTTQ*DTCLYI
Trigger: AATATAGAGACAGGTGTCTCACTGTGTTGTCCAGGC...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
3UTR-3UTR CCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGAAAATTAGCCAGGCGTaGTGGTGCGCACATATAGTC +
Preference number: 2 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLKISQA*WCAHIV
Trigger: GACTATATGTGCGCACCACCACGCCTGGCTAATTTT...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
3UTR CAA 90 bp GCAATTTCCATTTTATTCACATCACTTGTATCCTCTACTCTCAGCTaGTCAACCCAGGATGGCAATGACACCAGGAAGGTAACTGTCCCA +
Preference number: 2 (lower is better)
Translates to: AISILFTSLVSSTLS*STQDGNDTRKVTVP
Trigger: TGGGACAGTTACCTTCCTGGTGTCATTGCCATCCTGGGTTGACAAGCTGAGAGTAGAGGATACAAGTGATGTGAATAAAATGGAAATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
3UTR-3UTR TCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTAGTCCTGTTAGATGCTaGAAGCAGTCATTTTGCAAC +
Preference number: 2 (lower is better)
Translates to: GKQIATKTLLESLVHNVPSPVRC*KQSFCN
Trigger: GTTGCAAAATGACTGCTTTCAGCATCTAACAGGACT...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
3UTR-3UTR GCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGGCATGCAACATACTGTaGAAAACTGTGCCTCCATAC +
Preference number: 2 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLACNIL*KTVPPY
Trigger: GTATGGAGGCACAGTTTTGCACAGTATGTTGCATGC...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
3UTR-3UTR TCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGAGTCCTGTTAGATGCTaGAAGCAGTCATTTTGCAAC +
Preference number: 2 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLSPVRC*KQSFCN
Trigger: GTTGCAAAATGACTGCTTTCAGCATCTAACAGGACT...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
3UTR-3UTR TCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGCACCAACAGTGTTTTTaGACAGGCATCAGTTATGAA +
Preference number: 2 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLHQQCF*TGISYE
Trigger: TTCATAACTGATGCCTGTTCAAAAACACTGTTGGTG...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
3UTR-3UTR TCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGTCTCTAACTTATCAGTaGCAGGCATCCTGTTTTCTA +
Preference number: 2 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLSLTYQ*QASCFL
Trigger: TAGAAAACAGGATGCCTGTCACTGATAAGTTAGAGA...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
3UTR-3UTR TCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGGAGAAATTCTTCAGCTaGACCCTTTCAAAAGCTTTG +
Preference number: 2 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLEKFFS*TLSKAL
Trigger: CAAAGCTTTTGAAAGGGTTCAGCTGAAGAATTTCTC...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
3UTR-3UTR CCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTATCAGATGTATGTCTTaGTCAAATGTCTGTAGACAG +
Preference number: 2 (lower is better)
Translates to: GKQIATKTLLESLVHNVPIRCMS*SNVCRQ
Trigger: CTGTCTACAGACATTTGACCAAGACATACATCTGAT...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
3UTR-3UTR CCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTCTAGTAACCAACACATaGAAGCATCATATGCACATA +
Preference number: 2 (lower is better)
Translates to: GKQIATKTLLESLVHNVPLVTNT*KHHMHI
Trigger: TATGTGCATATGATGCTTCCATGTGTTGGTTACTAG...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
3UTR-3UTR TCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGTGTAGACAGCCACCTTaGGAACAAATTGATAAACAT +
Preference number: 2 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLCRQPP*EQIDKH
Trigger: ATGTTTATCAATTTGTTCTCAAGGTGGCTGTCTACA...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
3UTR-3UTR TCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGAGAGCTTGTAAGTGTTaGTACTCATCTATCTATCTG +
Preference number: 2 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLRACKC*YSSIYL
Trigger: CAGATAGATAGATGAGTATCAACACTTACAAGCTCT...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
3UTR-3UTR GCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTGCACTAACTAATATGTaGTATAACCTCTTCAGTCAT +
Preference number: 2 (lower is better)
Translates to: GKQIATKTLLESLVHNVPALTNM*YNLFSH
Trigger: ATGACTGAAGAGGTTATAGCACATATTAGTTAGTGC...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
3UTR-3UTR CCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGCTAGTAACCAACACATaGAAGCATCATATGCACATA +
Preference number: 2 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLLVTNT*KHHMHI
Trigger: TATGTGCATATGATGCTTCCATGTGTTGGTTACTAG...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
3UTR-3UTR CCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGAATTGCTATGTTTCTTaGACCTTAGCCCATTGCTTA +
Preference number: 2 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLNCYVS*TLAHCL
Trigger: TAAGCAATGGGCTAAGGTCCAAGAAACATAGCAATT...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
3UTR-3UTR CCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGACATTGATAGCTTTCTaGGCTGATAGTATAGAACTC +
Preference number: 2 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLTLIAF*ADSIEL
Trigger: GAGTTCTATACTATCAGCCCAGAAAGCTATCAATGT...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
3UTR-3UTR GCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGGCACTAACTAATATGTaGTATAACCTCTTCAGTCAT +
Preference number: 2 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLALTNM*YNLFSH
Trigger: ATGACTGAAGAGGTTATAGCACATATTAGTTAGTGC...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
3UTR-3UTR CAA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGCCTGAGGTCAGAAGTTaGAGATCAGCCTGGCCAACA +
Preference number: 3 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLPEVRS*RSAWPT
Trigger: TGTTGGCCAGGCTGATCTCAAACTTCTGACCTCAGG...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
3UTR TCA 72 bp CCAGGTTGGAGTGCAGTGGTTATTCTTTCACAGGTGTaGTCATTACACACTACAGCCCCAAACTCCTGTACT +
Preference number: 3 (lower is better)
Translates to: PGWSAVVILSQV*SLHTTAPNSCT
Trigger: AGTACAGGAGTTTGGGGCTGTAGTGTGTAATGATCACACCTGTGAAAGAATAACCACTGCACTCCAACCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
3UTR GCA 72 bp CTGGGCCATATGGTCTCCCTTGCAATGACTCAACTCTaGTACTGTAGCACAAAGCGGCCATACACAATATTT +
Preference number: 3 (lower is better)
Translates to: LGHMVSLAMTQL*YCSTKRPYTIF
Trigger: AAATATTGTGTATGGCCGCTTTGTGCTACAGTAGCAGAGTTGAGTCATTGCAAGGGAGACCATATGGCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
3UTR-3UTR CAA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGACAAAAATTAGCCAGTaGTGGTGGCGTGCACCTGTA +
Preference number: 3 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLTKISQ*WWRAPV
Trigger: TACAGGTGCACGCCACCACAACTGGCTAATTTTTGT...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
3UTR CCA 72 bp AAAGCTTTGGTGTTAGGGAGATCTAGGTTAAAATCTTaGCTCTTGCTGGGAGCAGTAGCTCGCACCTGTAAT +
Preference number: 3 (lower is better)
Translates to: KALVLGRSRLKS*LLLGAVARTCN
Trigger: ATTACAGGTGCGAGCTACTGCTCCCAGCAAGAGCCAAGATTTTAACCTAGATCTCCCTAACACCAAAGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
3UTR-3UTR CAA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGATAGCTACAAAAACCTaGCTGGAAAGCCTAGTCCAC +
Preference number: 3 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLIATKT*LESLVH
Trigger: GTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTAT...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
3UTR-3UTR CAA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGACCCTTTCAAAAGCTTaGGTGTTAGGGAGATCTAGG +
Preference number: 3 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLTLSKA*VLGRSR
Trigger: CCTAGATCTCCCTAACACCAAAGCTTTTGAAAGGGT...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
3UTR-3UTR CAA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTTATAGAATAAAGGCTTaGTGTGTGGGGACTTTCAGT +
Preference number: 3 (lower is better)
Translates to: GKQIATKTLLESLVHNVPYRIKA*CVGTFS
Trigger: ACTGAAAGTCCCCACACACAAAGCCTTTATTCTATA...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
3UTR CCA 72 bp GCATCATCTCACTTCACTTGGACATTGATAGCTTTCTaGGCTGATAGTATAGAACTCCGAACAAAAATCCCC +
Preference number: 3 (lower is better)
Translates to: ASSHFTWTLIAF*ADSIELRTKIP
Trigger: GGGGATTTTTGTTCGGAGTTCTATACTATCAGCCCAGAAAGCTATCAATGTCCAAGTGAAGTGAGATGATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
3UTR-3UTR CAA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGTATAGAATAAAGGCTTaGTGTGTGGGGACTTTCAGT +
Preference number: 3 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLYRIKA*CVGTFS
Trigger: ACTGAAAGTCCCCACACACAAAGCCTTTATTCTATA...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
3UTR GCA 72 bp TTTCTTGATGTGAGGGTCAAAGCAATAATGTGGCCATaGATCATCTCACTTCACTTGGACATTGATAGCTTT +
Preference number: 3 (lower is better)
Translates to: FLDVRVKAIMWP*IISLHLDIDSF
Trigger: AAAGCTATCAATGTCCAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR TCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTGGGGGCCGCTCCTTTTaGACCACTTGGTTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPGGRSF*TTWLLS
Trigger: AGAGAGCAACCAAGTGGTTCAAAAGGAGCGGCCCCC...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTCCTGAGAAGCCCCTCTaGCCTTTTAGGCACCTGAGC +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPPEKPL*PFRHLS
Trigger: GCTCAGGTGCCTAAAAGGCCAGAGGGGCTTCTCAGG...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR TCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGGGGGGCCGCTCCTTTTaGACCACTTGGTTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLGGRSF*TTWLLS
Trigger: AGAGAGCAACCAAGTGGTTCAAAAGGAGCGGCCCCC...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR TCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTAGGTGGAGGTTGCAGTaGGCCAAGATCGTACCACTG +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPRWRLQ*AKIVPL
Trigger: CAGTGGTACGATCTTGGCTCACTGCAACCTCCACCT...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR GCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTAGGGTCTTGCCATGTTaGCCAGGTTGGAGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPRVLPC*PGWSAV
Trigger: CACTGCACTCCAACCTGGGCAACATGGCAAGACCCT...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR TCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTGGCCTTTTAGGCACCTaGGCTCATGATTCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPGLLGT*AHDSAL
Trigger: CAGAGCTGAATCATGAGCTCAGGTGCCTAAAAGGCC...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR TCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGGCACTCCAGCCTGGGTaGCAGACTGAATCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLALQPG*QTESLS
Trigger: AGACAGAGATTCAGTCTGTCACCCAGGCTGGAGTGC...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR TCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGAGGTGGAGGTTGCAGTaGGCCAAGATCGTACCACTG +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLRWRLQ*AKIVPL
Trigger: CAGTGGTACGATCTTGGCTCACTGCAACCTCCACCT...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR TCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGCCTGCCTCAGCCTCTTaGGTAGGTGGGACTATAGGA +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLPASAS*VGGTIG
Trigger: TCCTATAGTCCCACCTACTCAAGAGGCTGAGGCAGG...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR GCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTAGCAGCTATGCTATCTaGTTCCCGAAGCCTCACAGC +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPSSYAI*FPKPHS
Trigger: GCTGTGAGGCTTCGGGAAGCAGATAGCATAGCTGCT...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR GCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGCAGCCACAGCAGCTATaGTATCTGCTTCCCGAAGCC +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLQPQQL*YLLPEA
Trigger: GGCTTCGGGAAGCAGATAGCATAGCTGCTGTGGCTG...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR GCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTACTACCATCTGCCACTaGGGGGTCCAAAGACATCGA +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPTTICH*GVQRHR
Trigger: TCGATGTCTTTGGACCCCGCAGTGGCAGATGGTAGT...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR GCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGGCTCTCACTACCATCTaGCACTGCGGGGTCCAAAGA +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLALTTI*HCGVQR
Trigger: TCTTTGGACCCCGCAGTGGCAGATGGTAGTGAGAGC...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR GCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGAGGGTCTTGCCATGTTaGCCAGGTTGGAGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLRVLPC*PGWSAV
Trigger: CACTGCACTCCAACCTGGGCAACATGGCAAGACCCT...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTGTAGTACGAGCTAAGTaGCGCTGCCAGTGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPVVRAK*RCQCSS
Trigger: AGAGGAACACTGGCAGCGCCACTTAGCTCGTACTAC...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTGTAGTCCCAGCTACTTaGGAGCTGAGGCAGGAGAAT +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPVVPAT*ELRQEN
Trigger: ATTCTCCTGCCTCAGCTCCCAAGTAGCTGGGACTAC...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR TCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTGACTGGCCATCTGACTaGCTGTATGCGATACTGTGT +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPDWPSD*LYAILC
Trigger: ACACAGTATCGCATACAGTCAGTCAGATGGCCAGTC...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR TCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTAGTGGGTGGATCACCTaGGGTCAGAAGTTTGAGATC +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPSGWIT*GQKFEI
Trigger: GATCTCAAACTTCTGACCTCAGGTGATCCACCCACT...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR TCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTAACCCAGGATGGCAATaGCACCAGGAAGGTAACTGT +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPNPGWQ*HQEGNC
Trigger: ACAGTTACCTTCCTGGTGTCATTGCCATCCTGGGTT...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR GCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGAGCAGCTATGCTATCTaGTTCCCGAAGCCTCACAGC +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLSSYAI*FPKPHS
Trigger: GCTGTGAGGCTTCGGGAAGCAGATAGCATAGCTGCT...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR GCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTGCACTCCAGCCTGAGTaGAGTGAGACTTCATCTCAA +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPALQPE*SETSSQ
Trigger: TTGAGATGAAGTCTCACTGCACTCAGGCTGGAGTGC...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTTCACTCAGTCGGGCTTaGACCAATTCCTTCTCTAGC +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPSLSRA*TNSFSS
Trigger: GCTAGAGAAGGAATTGGTCCAAGCCCGACTGAGTGA...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGGTAGTACGAGCTAAGTaGCGCTGCCAGTGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLVVRAK*RCQCSS
Trigger: AGAGGAACACTGGCAGCGCCACTTAGCTCGTACTAC...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTCTTGGTTGCTCTCTCTaGTCTCCAGCACACTGTCTT +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPLGCSL*SPAHCL
Trigger: AAGACAGTGTGCTGGAGACCAGAGAGAGCAACCAAG...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR TCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGGACTGGCCATCTGACTaGCTGTATGCGATACTGTGT +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLDWPSD*LYAILC
Trigger: ACACAGTATCGCATACAGTCAGTCAGATGGCCAGTC...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR TCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTGCCTGGACAACACAGTaGGACACCTGTCTCTATATT +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPAWTTQ*DTCLYI
Trigger: AATATAGAGACAGGTGTCTCACTGTGTTGTCCAGGC...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR TCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGAGTGGGTGGATCACCTaGGGTCAGAAGTTTGAGATC +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLSGWIT*GQKFEI
Trigger: GATCTCAAACTTCTGACCTCAGGTGATCCACCCACT...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR TCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGAACCCAGGATGGCAATaGCACCAGGAAGGTAACTGT +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLNPGWQ*HQEGNC
Trigger: ACAGTTACCTTCCTGGTGTCATTGCCATCCTGGGTT...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR GCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTAGAGCTCAGCTTTTCTaGAACTTTGTCTGTCGCCAC +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPRAQLF*NFVCRH
Trigger: GTGGCGACAGACAAAGTTGCAGAAAAGCTGAGCTCT...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGTCACTCAGTCGGGCTTaGACCAATTCCTTCTCTAGC +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLSLSRA*TNSFSS
Trigger: GCTAGAGAAGGAATTGGTCCAAGCCCGACTGAGTGA...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGCTTGGTTGCTCTCTCTaGTCTCCAGCACACTGTCTT +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLLGCSL*SPAHCL
Trigger: AAGACAGTGTGCTGGAGACCAGAGAGAGCAACCAAG...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGAGCCTCTTGAGTAGGTaGGACTATAGGAGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLSLLSR*DYRSVP
Trigger: TGGCACACTCCTATAGTCCCACCTACTCAAGAGGCT...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTCCATGTTGCCCAGGTTaGAGTGCAGTGGTTATTCTT +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPPCCPG*SAVVIL
Trigger: AAGAATAACCACTGCACTCCAACCTGGGCAACATGG...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR TCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTTGGTCAGACAGTGGTTaGATACGACTCTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPWSDSG*IRLSSS
Trigger: AGAAGAAGAGAGTCGTATTCAACCACTGTCTGACCA...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR TCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTCAATATTTAAAAGGGTaGGCATGGGTGTGCCCCAAT +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPQYLKG*AWVCPN
Trigger: ATTGGGGCACACCCATGCTCACCCTTTTAAATATTG...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR TCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGTGGTCTCCCTTGCAATaGCTCAACTCTGCTACTGTA +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLWSPLQ*LNSATV
Trigger: TACAGTAGCAGAGTTGAGTCATTGCAAGGGAGACCA...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR GCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGAGAGCTCAGCTTTTCTaGAACTTTGTCTGTCGCCAC +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLRAQLF*NFVCRH
Trigger: GTGGCGACAGACAAAGTTGCAGAAAAGCTGAGCTCT...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR GCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTGCATGCAACATACTGTaGAAAACTGTGCCTCCATAC +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPACNIL*KTVPPY
Trigger: GTATGGAGGCACAGTTTTGCACAGTATGTTGCATGC...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR GCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTGGCATAATATCCTATTaGATCCTAAAGGCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPGIISY*ILKAWE
Trigger: CTCCCAGGCCTTTAGGATGCAATAGGATATTATGCC...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTGTGATGGTCAGACAGTaGTTGAATACGACTCTCTTC +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPVMVRQ*LNTTLF
Trigger: GAAGAGAGTCGTATTCAACCACTGTCTGACCATCAC...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTCAGGTTGGAGTGCAGTaGTTATTCTTTCACAGGTGT +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPQVGVQ*LFFHRC
Trigger: ACACCTGTGAAAGAATAACCACTGCACTCCAACCTG...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGCCATGTTGCCCAGGTTaGAGTGCAGTGGTTATTCTT +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLPCCPG*SAVVIL
Trigger: AAGAATAACCACTGCACTCCAACCTGGGCAACATGG...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR TCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTTGGGGTATCCCTTTATaGACAAGTTCCTTAACTTGC +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPWGIPL*TSSLTC
Trigger: GCAAGTTAAGGAACTTGTTCATAAAGGGATACCCCA...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR TCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTTGTGGAATGACCTTTTaGAAGTGCTGTAACATCCCT +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPCGMTF*KCCNIP
Trigger: AGGGATGTTACAGCACTTTCAAAAGGTCATTCCACA...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR TCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTTCTTTTAATGCACACTaGGACTCAGCTTCACTCAGT +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPSFNAH*DSASLS
Trigger: ACTGAGTGAAGCTGAGTCTCAGTGTGCATTAAAAGA...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR TCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTTTCAGCTCTGCTATCTaGTCTTTCAGTTCCCCAATA +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPFSSAI*SFSSPI
Trigger: TATTGGGGAACTGAAAGATCAGATAGCAGAGCTGAA...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR TCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGTGGTCAGACAGTGGTTaGATACGACTCTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLWSDSG*IRLSSS
Trigger: AGAAGAAGAGAGTCGTATTCAACCACTGTCTGACCA...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR TCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTATTCTTTCACAGGTGTaGTCATTACACACTACAGCC +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPILSQV*SLHTTA
Trigger: GGCTGTAGTGTGTAATGATCACACCTGTGAAAGAAT...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR GCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTACCCATAATGGCTTCTaGTTCTCTAAGTTTCACAGC +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPTHNGF*FSKFHS
Trigger: GCTGTGAAACTTAGAGAAGCAGAAGCCATTATGGGT...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR GCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTTGTGCAGAAAGATACTaGACTTTCTCCTGTAGGCTA +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPCAERY*TFSCRL
Trigger: TAGCCTACAGGAGAAAGTGCAGTATCTTTCTGCACA...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR GCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTGCAATAATGTGGCCATaGATCATCTCACTTCACTTG +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPAIMWP*IISLHL
Trigger: CAAGTGAAGTGAGATGATGCATGGCCACATTATTGC...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR GCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGCCATATGGTCTCCCTTaGAATGACTCAACTCTGCTA +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLPYGLP*NDSTLL
Trigger: TAGCAGAGTTGAGTCATTGCAAGGGAGACCATATGG...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR GCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTGGGACTATAGGAGTGTaGCAATTTCTAAAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPGTIGV*QFLKRL
Trigger: CAGCCTTTTTAGAAATTGGCACACTCCTATAGTCCC...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGGTGATGGTCAGACAGTaGTTGAATACGACTCTCTTC +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLVMVRQ*LNTTLF
Trigger: GAAGAGAGTCGTATTCAACCACTGTCTGACCATCAC...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTTCTAGGTTAAAATCTTaGCTCTTGCTGGGAGCAGTA +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPSRLKS*LLLGAV
Trigger: TACTGCTCCCAGCAAGAGCCAAGATTTTAACCTAGA...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGCACTTTGCTGACCCCTaGTCCAGATCATTCAGATTT +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLHFADP*SRSFRF
Trigger: AAATCTGAATGATCTGGACCAGGGGTCAGCAAAGTG...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
3UTR CAA 72 bp TTTCATTTCTCAGGCAAGCAAATAGCTACAAAAACCTaGCTGGAAAGCCTAGTCCACAACGTACCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: FHFSGKQIATKT*LESLVHNVPEG
Trigger: GCCTTCAGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCCTGAGAAATGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR TCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGTGGGGTATCCCTTTATaGACAAGTTCCTTAACTTGC +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLWGIPL*TSSLTC
Trigger: GCAAGTTAAGGAACTTGTTCATAAAGGGATACCCCA...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR TCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGTGTGGAATGACCTTTTaGAAGTGCTGTAACATCCCT +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLCGMTF*KCCNIP
Trigger: AGGGATGTTACAGCACTTTCAAAAGGTCATTCCACA...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR TCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGTCTTTTAATGCACACTaGGACTCAGCTTCACTCAGT +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLSFNAH*DSASLS
Trigger: ACTGAGTGAAGCTGAGTCTCAGTGTGCATTAAAAGA...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR TCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTGCAATGAGTTCTTCCTaGAGCCTTGCAATATTATTC +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPAMSSS*SLAILF
Trigger: GAATAATATTGCAAGGCTTCAGGAAGAACTCATTGC...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR TCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTGAAGATGGTTACTATTaGTCTGGTTCTGTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPEDGYY*SGSVFP
Trigger: TGGAAACACAGAACCAGATCAATAGTAACCATCTTC...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR TCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGTTCAGCTCTGCTATCTaGTCTTTCAGTTCCCCAATA +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLFSSAI*SFSSPI
Trigger: TATTGGGGAACTGAAAGATCAGATAGCAGAGCTGAA...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR TCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTCACCAACAGTGTTTTTaGACAGGCATCAGTTATGAA +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPHQQCF*TGISYE
Trigger: TTCATAACTGATGCCTGTTCAAAAACACTGTTGGTG...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR TCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGATTCTTTCACAGGTGTaGTCATTACACACTACAGCC +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLILSQV*SLHTTA
Trigger: GGCTGTAGTGTGTAATGATCACACCTGTGAAAGAAT...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR TCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTTCCCAAATAACTGGCTaGTTAGTAGAAACCTGTCAT +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPSQITG*LVETCH
Trigger: ATGACAGGTTTCTACTAATCAGCCAGTTATTTGGGA...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR GCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGACCCATAATGGCTTCTaGTTCTCTAAGTTTCACAGC +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLTHNGF*FSKFHS
Trigger: GCTGTGAAACTTAGAGAAGCAGAAGCCATTATGGGT...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR GCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTAATCACCTCTTGTTCTaGTCTTCGAAGATGGTTACT +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPNHLLF*SSKMVT
Trigger: AGTAACCATCTTCGAAGAGCAGAACAAGAGGTGATT...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR GCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTGAGTCCTTTGTTCTGTaGAGAAAGATACTGCACTTT +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPESFVL*RKILHF
Trigger: AAAGTGCAGTATCTTTCTGCACAGAACAAAGGACTC...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR GCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGGGGACTATAGGAGTGTaGCAATTTCTAAAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLGTIGV*QFLKRL
Trigger: CAGCCTTTTTAGAAATTGGCACACTCCTATAGTCCC...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR GCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTGGAGAGTTAACAAGCTaGATCATGTTCAGAATTGAG +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPGELTS*IMFRIE
Trigger: CTCAATTCTGAACATGATGCAGCTTGTTAACTCTCC...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTATGTACAAAGAGCTCTaGAAGATGCTCCTGTATCAT +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPMYKEL*KMLLYH
Trigger: ATGATACAGGAGCATCTTCCAGAGCTCTTTGTACAT...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTTCTGCTCTTCGAAGATaGTTACTATTGATCTGGTTC +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPSALRR*LLLIWF
Trigger: GAACCAGATCAATAGTAACCATCTTCGAAGAGCAGA...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTTCTTCATCGGAGGAATaGAATGATTCATCATCTCCT +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPSSSEE*NDSSSP
Trigger: AGGAGATGATGAATCATTCCATTCCTCCGATGAAGA...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTTCATCTCACTTCACTTaGACATTGATAGCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPSSHFT*TLIAFW
Trigger: CCAGAAAGCTATCAATGTCCAAGTGAAGTGAGATGA...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTACAGTGATGGGATTCTaGAGTTCTTTCCTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPTVMGF*SSFLSF
Trigger: GAAAGAAAGGAAAGAACTCCAGAATCCCATCACTGT...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR TCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTAGGAGTTCTGAATACTaGTCCTTAATTGGCATACTT +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPRSSEY*SLIGIL
Trigger: AAGTATGCCAATTAAGGATCAGTATTCAGAACTCCT...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR TCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTCATTTTCAGGAGTTCTaGATACTGATCCTTAATTGG +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPHFQEF*ILILNW
Trigger: CCAATTAAGGATCAGTATTCAGAACTCCTGAAAATG...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR TCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGCAAACTGATGTGGAATaGCCTTTTGAAAGTGCTGTA +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLQTDVE*PFESAV
Trigger: TACAGCACTTTCAAAAGGTCATTCCACATCAGTTTG...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR TCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGGCAATGAGTTCTTCCTaGAGCCTTGCAATATTATTC +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLAMSSS*SLAILF
Trigger: GAATAATATTGCAAGGCTTCAGGAAGAACTCATTGC...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR TCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGGAAGATGGTTACTATTaGTCTGGTTCTGTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLEDGYY*SGSVFP
Trigger: TGGAAACACAGAACCAGATCAATAGTAACCATCTTC...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR TCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTTTTGCTTCACTTAATTaGGTAAGGAGTCCTTTGTTC +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPFASLN*VRSPLF
Trigger: GAACAAAGGACTCCTTACTCAATTAAGTGAAGCAAA...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR TCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTTGTAGACAGCCACCTTaGGAACAAATTGATAAACAT +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPCRQPP*EQIDKH
Trigger: ATGTTTATCAATTTGTTCTCAAGGTGGCTGTCTACA...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR TCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGTGCTTTAAAGAACAGTaGTGGGATTCTGGAGTTCTT +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLCFKEQ*WDSGVL
Trigger: AAGAACTCCAGAATCCCATCACTGTTCTTTAAAGCA...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR TCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTTTCACTTTTCTCCCCTaGATATACTCAACTCTAAGT +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPFTFLP*IYSTLS
Trigger: ACTTAGAGTTGAGTATATTCAGGGGAGAAAAGTGAA...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR TCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGTCCCAAATAACTGGCTaGTTAGTAGAAACCTGTCAT +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLSQITG*LVETCH
Trigger: ATGACAGGTTTCTACTAATCAGCCAGTTATTTGGGA...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR TCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTGCAGATCAATGGATGTaGTGTAAAAACTTGGATCAT +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPADQWM*CKNLDH
Trigger: ATGATCCAAGTTTTTACATCACATCCATTGATCTGC...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR GCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGTCTTCTTCTGGCATCTaGATAAGCAACAATCCAACT +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLSSSGI*ISNNPT
Trigger: AGTTGGATTGTTGCTTATGCAGATGCCAGAAGAAGA...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR GCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTACAAAGGCCCAATTCTaGCATACTTGGTTTAAAAAG +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPTKAQF*HTWFKK
Trigger: CTTTTTAAACCAAGTATGGCAGAATTGGGCCTTTGT...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR GCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGAATCACCTCTTGTTCTaGTCTTCGAAGATGGTTACT +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLNHLLF*SSKMVT
Trigger: AGTAACCATCTTCGAAGAGCAGAACAAGAGGTGATT...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR GCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGGAGTCCTTTGTTCTGTaGAGAAAGATACTGCACTTT +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLESFVL*RKILHF
Trigger: AAAGTGCAGTATCTTTCTGCACAGAACAAAGGACTC...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR GCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGCTTGCATTCAATCTCTaGTTGTTTACGCTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLLAFNL*LFTLCF
Trigger: GAAGCAAAGCGTAAACAAGCAGAGATTGAATGCAAG...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR GCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGCTCATGATTCAGCTCTaGTATCTGATCTTTCAGTTC +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLLMIQL*YLIFQF
Trigger: GAACTGAAAGATCAGATAGCAGAGCTGAATCATGAG...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR GCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGGGAGAGTTAACAAGCTaGATCATGTTCAGAATTGAG +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLGELTS*IMFRIE
Trigger: CTCAATTCTGAACATGATGCAGCTTGTTAACTCTCC...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR GCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTCTGTATCAATCTATCTaGCAAGGAAGCACTTTCTTT +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPLYQSI*QGSTFF
Trigger: AAAGAAAGTGCTTCCTTGGCAGATAGATTGATACAG...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540033.2
CDS-3UTR GCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTTTGGAACTGCATTTATaGTGTATCAATCTATCTGCC +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPLELHL*CINLSA
Trigger: GGCAGATAGATTGATACAGCATAAATGCAGTTCCAA...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540033.2
CDS-3UTR CCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGGAAAGCTTCTTCTTCTaGCATCTGCATAAGCAACAA +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLESFFF*HLHKQQ
Trigger: TTGTTGCTTATGCAGATGCCAGAAGAAGAAGCTTTC...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGATGTACAAAGAGCTCTaGAAGATGCTCCTGTATCAT +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLMYKEL*KMLLYH
Trigger: ATGATACAGGAGCATCTTCCAGAGCTCTTTGTACAT...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTACCATCAAACTGATGTaGAATGACCTTTTGAAAGTG +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPTIKLM*NDLLKV
Trigger: CACTTTCAAAAGGTCATTCCACATCAGTTTGATGGT...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGTCTGCTCTTCGAAGATaGTTACTATTGATCTGGTTC +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLSALRR*LLLIWF
Trigger: GAACCAGATCAATAGTAACCATCTTCGAAGAGCAGA...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGTCTTCATCGGAGGAATaGAATGATTCATCATCTCCT +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLSSSEE*NDSSSP
Trigger: AGGAGATGATGAATCATTCCATTCCTCCGATGAAGA...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTAATTGCTATGTTTCTTaGACCTTAGCCCATTGCTTA +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPNCYVS*TLAHCL
Trigger: TAAGCAATGGGCTAAGGTCCAAGAAACATAGCAATT...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGGTCAAAGCAATAATGTaGCCATGCATCATCTCACTT +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLVKAIM*PCIISL
Trigger: AAGTGAGATGATGCATGGCCACATTATTGCTTTGAC...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGACAGTGATGGGATTCTaGAGTTCTTTCCTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLTVMGF*SSFLSF
Trigger: GAAAGAAAGGAAAGAACTCCAGAATCCCATCACTGT...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGATCAAAGGCACTATCTaGAGAGTTAACAAGCTGCAT +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLIKGTI*RVNKLH
Trigger: ATGCAGCTTGTTAACTCTCCAGATAGTGCCTTTGAT...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR TCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGCATTTTCAGGAGTTCTaGATACTGATCCTTAATTGG +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLHFQEF*ILILNW
Trigger: CCAATTAAGGATCAGTATTCAGAACTCCTGAAAATG...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR TCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGCTCCTATTAAATGGTTaGCAATGTGGATTCCATCAA +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLLLLNG*QCGFHQ
Trigger: TTGATGGAATCCACATTGTCAACCATTTAATAGGAG...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR TCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGTTCACTTTTCTCCCCTaGATATACTCAACTCTAAGT +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLFTFLP*IYSTLS
Trigger: ACTTAGAGTTGAGTATATTCAGGGGAGAAAAGTGAA...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR GCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGGCTTTTCCTTCTTTTTaGGTACATCTTCCCATTCAT +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLAFPSF*VHLPIH
Trigger: ATGAATGGGAAGATGTACGCAAAAAGAAGGAAAAGC...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR GCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTCTTCTTCCTTATTCTTaGATTCAATCTCTGCTTGTT +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPLLPYS*IQSLLV
Trigger: AACAAGCAGAGATTGAATGCAAGAATAAGGAAGAAG...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR GCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTGAGAACATTGTTCAATaGTTCAAAGTCTTGAACAAC +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPENIVQ*FKVLNN
Trigger: GTTGTTCAAGACTTTGAAGCATTGAACAATGTTCTC...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR GCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGCGTTGTAGTTGGAACTaGATTTATGCTGTATCAATC +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLRCSWN*IYAVSI
Trigger: GATTGATACAGCATAAATGCAGTTCCAACTACAACG...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540033.2
CDS-3UTR CCA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTATCATACATTCAAACTaGTACATACAAAGGCCCAAT +
Preference number: 4 (lower is better)
Translates to: GKQIATKTLLESLVHNVPIIHSN*YIQRPN
Trigger: ATTGGGCCTTTGTATGTACCAGTTTGAATGTATGAT...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGACCATCAAACTGATGTaGAATGACCTTTTGAAAGTG +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLTIKLM*NDLLKV
Trigger: CACTTTCAAAAGGTCATTCCACATCAGTTTGATGGT...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGTTTCCTTCTTCTTTCTaGATTTCAAGCTCAGCAATG +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLFPSSF*ISSSAM
Trigger: CATTGCTGAGCTTGAAATCCAGAAAGAAGAAGGAAA...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGATCAGATGTATGTCTTaGTCAAATGTCTGTAGACAG +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLIRCMS*SNVCRQ
Trigger: CTGTCTACAGACATTTGACCAAGACATACATCTGAT...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR GCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGACAAGTTCCTTAACTTaGTTTTCCTTCTTTTTGCGT +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLTSSLT*FSFFLR
Trigger: ACGCAAAAAGAAGGAAAAGCAAGTTAAGGAACTTGT...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR GCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGCTTCTTCCTTATTCTTaGATTCAATCTCTGCTTGTT +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLLLPYS*IQSLLV
Trigger: AACAAGCAGAGATTGAATGCAAGAATAAGGAAGAAG...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR GCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGGAGAACATTGTTCAATaGTTCAAAGTCTTGAACAAC +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLENIVQ*FKVLNN
Trigger: GTTGTTCAAGACTTTGAAGCATTGAACAATGTTCTC...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGATCATACATTCAAACTaGTACATACAAAGGCCCAAT +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLIIHSN*YIQRPN
Trigger: ATTGGGCCTTTGTATGTACCAGTTTGAATGTATGAT...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CCA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGAGTTCCCCAATATACTaGTTAGAATCAGACTTGTTA +
Preference number: 4 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLSSPIY*LESDLL
Trigger: TAACAAGTCTGATTCTAACCAGTATATTGGGGAACT...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS GCA 90 bp TCTGGTCTCCAGCACACTGTCTTCTGTTTCGCTCTCACTACCATCTaGCACTGCGGGGTCCAAAGACATCGAACCAGATTTTCCGTGCAA +
Preference number: 5 (lower is better)
Translates to: SGLQHTVFCFALTTI*HCGVQRHRTRFSVQ
Trigger: TTGCACGGAAAATCTGGTTCGATGTCTTTGGACCCCGCAGTGGCAGATGGTAGTGAGAGCGAAACAGAAGACAGTGTGCTGGAGACCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370331.5
ENST00000540033.2
ENST00000684568.1
CDS GCA 90 bp CTCCAGCACACTGTCTTCTGTTTCGCTCTCACTACCATCTGCCACTaGGGGGTCCAAAGACATCGAACCAGATTTTCCGTGCAAAGGAAA +
Preference number: 5 (lower is better)
Translates to: LQHTVFCFALTTICH*GVQRHRTRFSVQRK
Trigger: TTTCCTTTGCACGGAAAATCTGGTTCGATGTCTTTGGACCCCGCAGTGGCAGATGGTAGTGAGAGCGAAACAGAAGACAGTGTGCTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370331.5
ENST00000540033.2
ENST00000684568.1
CDS-3UTR CAA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGCGGGGGCCGCTCCTTTaGAACCACTTGGTTGCTCTC +
Preference number: 5 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLRGPLL*NHLVAL
Trigger: GAGAGCAACCAAGTGGTTCAAAAGGAGCGGCCCCCG...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS GCA 90 bp TGCCATTGTTGTTGGTGCTGGAGCTTCCTGATGGTATTTTCAGCTTaGTCCAGCTTAGCACTGGCCTCATCACTCTGCTGTTTGATGGTG +
Preference number: 5 (lower is better)
Translates to: CHCCWCWSFLMVFSA*SSLALASSLCCLMV
Trigger: CACCATCAAACAGCAGAGTGATGAGGCCAGTGCTAAGCTGGAGCAAGCTGAAAATACCATCAGGAAGCTCCAGCACCAACAACAATGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491940.5
ENST00000684568.1
CDS TCA 90 bp ACTGGCCATCTGACTGACTGTATGCGATACTGTGTTCTTCACCCATaGGAGAGTAGAGCTCAGCTTTTCTGCAACTTTGTCTGTCGCCAC +
Preference number: 5 (lower is better)
Translates to: TGHLTDCMRYCVLHP*ESRAQLFCNFVCRH
Trigger: GTGGCGACAGACAAAGTTGCAGAAAAGCTGAGCTCTACTCTCTCATGGGTGAAGAACACAGTATCGCATACAGTCAGTCAGATGGCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370331.5
ENST00000540033.2
ENST00000684568.1
CDS-3UTR CAA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTCCTGAGGTCAGAAGTTaGAGATCAGCCTGGCCAACA +
Preference number: 5 (lower is better)
Translates to: GKQIATKTLLESLVHNVPPEVRS*RSAWPT
Trigger: TGTTGGCCAGGCTGATCTCAAACTTCTGACCTCAGG...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CAA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGCTTGTAGGCTGCACTTaGCTGACCCCTGGTCCAGAT +
Preference number: 5 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLLVGCT*LTPGPD
Trigger: ATCTGGACCAGGGGTCAGCAAAGTGCAGCCTACAAG...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CAA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTGCCATGTTGCCCAGGTaGGAGTGCAGTGGTTATTCT +
Preference number: 5 (lower is better)
Translates to: GKQIATKTLLESLVHNVPAMLPR*ECSGYS
Trigger: AGAATAACCACTGCACTCCAACCTGGGCAACATGGC...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CAA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTGCTGCTTGGATTAGCTaGTCTGGGACACCATCAAAC +
Preference number: 5 (lower is better)
Translates to: GKQIATKTLLESLVHNVPAAWIS*SGTPSN
Trigger: GTTTGATGGTGTCCCAGACAAGCTAATCCAAGCAGC...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CAA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTCTCCTTTTGAACCACTaGGTTGCTCTCTCTGGTCTC +
Preference number: 5 (lower is better)
Translates to: GKQIATKTLLESLVHNVPLLLNH*VALSGL
Trigger: GAGACCAGAGAGAGCAACCAAGTGGTTCAAAAGGAG...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CAA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGGCCATGTTGCCCAGGTaGGAGTGCAGTGGTTATTCT +
Preference number: 5 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLAMLPR*ECSGYS
Trigger: AGAATAACCACTGCACTCCAACCTGGGCAACATGGC...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CAA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTCCCTTCCATGTCAAGTaGCATCAGTTCTGCCTGATT +
Preference number: 5 (lower is better)
Translates to: GKQIATKTLLESLVHNVPPFHVK*HQFCLI
Trigger: AATCAGGCAGAACTGATGCAACTTGACATGGAAGGG...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS CCA 90 bp GAGGAATGGAATGATTCATCATCTCCTATTAAATGGTTGACAATGTaGATTCCATCAAAAGGAGGTTGGCCTGAGAAGCCCCTCTGGCCT +
Preference number: 5 (lower is better)
Translates to: EEWNDSSSPIKWLTM*IPSKGGWPEKPLWP
Trigger: AGGCCAGAGGGGCTTCTCAGGCCAACCTCCTTTTGATGGAATCCACATTGTCAACCATTTAATAGGAGATGATGAATCATTCCATTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370331.5
ENST00000540033.2
ENST00000684568.1
CDS-3UTR CAA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGAGCTTTTCTGCAACTTaGTCTGTCGCCACCTGTTTC +
Preference number: 5 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLSFSAT*SVATCF
Trigger: GAAACAGGTGGCGACAGACAAAGTTGCAGAAAAGCT...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CAA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGCCCTTCCATGTCAAGTaGCATCAGTTCTGCCTGATT +
Preference number: 5 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLPFHVK*HQFCLI
Trigger: AATCAGGCAGAACTGATGCAACTTGACATGGAAGGG...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CAA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTATAGCTACAAAAACCTaGCTGGAAAGCCTAGTCCAC +
Preference number: 5 (lower is better)
Translates to: GKQIATKTLLESLVHNVPIATKT*LESLVH
Trigger: GTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTAT...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CAA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTACCCTTTCAAAAGCTTaGGTGTTAGGGAGATCTAGG +
Preference number: 5 (lower is better)
Translates to: GKQIATKTLLESLVHNVPTLSKA*VLGRSR
Trigger: CCTAGATCTCCCTAACACCAAAGCTTTTGAAAGGGT...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CAA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTCACTTCACTTGGACATaGATAGCTTTCTGGGCTGAT +
Preference number: 5 (lower is better)
Translates to: GKQIATKTLLESLVHNVPHFTWT*IAFWAD
Trigger: ATCAGCCCAGAAAGCTATCAATGTCCAAGTGAAGTG...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CAA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTAGGCATAATATCCTATaGCATCCTAAAGGCCTGGGA +
Preference number: 5 (lower is better)
Translates to: GKQIATKTLLESLVHNVPRHNIL*HPKGLG
Trigger: TCCCAGGCCTTTAGGATGCAATAGGATATTATGCCT...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS TCA 90 bp CTTCATCGGAGGAATGGAATGATTCATCATCTCCTATTAAATGGTTaGCAATGTGGATTCCATCAAAAGGAGGTTGGCCTGAGAAGCCCC +
Preference number: 5 (lower is better)
Translates to: LHRRNGMIHHLLLNG*QCGFHQKEVGLRSP
Trigger: GGGGCTTCTCAGGCCAACCTCCTTTTGATGGAATCCACATTGTCAACCATTTAATAGGAGATGATGAATCATTCCATTCCTCCGATGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370331.5
ENST00000540033.2
ENST00000684568.1
CDS-3UTR CAA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTGCAGCAGTCATTTTGTaGGTAACCATGATAAGCAGA +
Preference number: 5 (lower is better)
Translates to: GKQIATKTLLESLVHNVPAAVIL*VTMISR
Trigger: TCTGCTTATCATGGTTACCAACAAAATGACTGCTGC...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CAA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTTATAAAAGCACTTCCTaGACAGTAACCAACCTCACG +
Preference number: 5 (lower is better)
Translates to: GKQIATKTLLESLVHNVPYKSTS*TVTNLT
Trigger: CGTGAGGTTGGTTACTGTCAAGGAAGTGCTTTTATA...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CAA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTTTCATAGCATTTTTCTaGGGTGGGTCTTTCCATCTC +
Preference number: 5 (lower is better)
Translates to: GKQIATKTLLESLVHNVPFIAFF*GGSFHL
Trigger: GAGATGGAAAGACCCACCCAAGAAAAATGCTATGAA...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CAA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTGCATTCAATCTCTGCTaGTTTACGCTTTGCTTCACT +
Preference number: 5 (lower is better)
Translates to: GKQIATKTLLESLVHNVPAFNLC*FTLCFT
Trigger: AGTGAAGCAAAGCGTAAACAAGCAGAGATTGAATGC...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CAA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGATGGTCAGACAGTGGTaGAATACGACTCTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLMVRQW*NTTLFF
Trigger: GAAGAAGAGAGTCGTATTCAACCACTGTCTGACCAT...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CAA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGCACTTCACTTGGACATaGATAGCTTTCTGGGCTGAT +
Preference number: 5 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLHFTWT*IAFWAD
Trigger: ATCAGCCCAGAAAGCTATCAATGTCCAAGTGAAGTG...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CAA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGAGGCATAATATCCTATaGCATCCTAAAGGCCTGGGA +
Preference number: 5 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLRHNIL*HPKGLG
Trigger: TCCCAGGCCTTTAGGATGCAATAGGATATTATGCCT...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS TCA 90 bp TTCTCTATATCCAAGACTTTATCCTGCATCTCTTTTAATGCACACTaGGACTCAGCTTCACTCAGTCGGGCTTGGACCAATTCCTTCTCT +
Preference number: 5 (lower is better)
Translates to: FSISKTLSCISFNAH*DSASLSRAWTNSFS
Trigger: AGAGAAGGAATTGGTCCAAGCCCGACTGAGTGAAGCTGAGTCTCAGTGTGCATTAAAAGAGATGCAGGATAAAGTCTTGGATATAGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370331.5
ENST00000468580.5
ENST00000491940.5
ENST00000492613.1
ENST00000540033.2
ENST00000684568.1
CDS-3UTR CAA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGGCAGCAGTCATTTTGTaGGTAACCATGATAAGCAGA +
Preference number: 5 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLAAVIL*VTMISR
Trigger: TCTGCTTATCATGGTTACCAACAAAATGACTGCTGC...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CAA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGAAGGCAGCAGTCATTTaGTTGGTAACCATGATAAGC +
Preference number: 5 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLKAAVI*LVTMIS
Trigger: GCTTATCATGGTTACCAACAAAATGACTGCTGCCTT...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CAA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTAGCCACTGTTTCTTCTaGACCCATTTACAGATCTTA +
Preference number: 5 (lower is better)
Translates to: GKQIATKTLLESLVHNVPSHCFF*THLQIL
Trigger: TAAGATCTGTAAATGGGTCAAGAAGAAACAGTGGCT...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CAA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTTGCTTTTCCTTCTTTTaGCGTACATCTTCCCATTCA +
Preference number: 5 (lower is better)
Translates to: GKQIATKTLLESLVHNVPCFSFF*RTSSHS
Trigger: TGAATGGGAAGATGTACGCAAAAAGAAGGAAAAGCA...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CAA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTGTTCTTCCTGAAGCCTaGCAATATTATTCTCATCAG +
Preference number: 5 (lower is better)
Translates to: GKQIATKTLLESLVHNVPVLPEA*QYYSHQ
Trigger: CTGATGAGAATAATATTGCAAGGCTTCAGGAAGAAC...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CAA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTTGTTCCTCTAAATCCTaGACTTGCTGTCTAAGTTCT +
Preference number: 5 (lower is better)
Translates to: GKQIATKTLLESLVHNVPCSSKS*TCCLSS
Trigger: AGAACTTAGACAGCAAGTCAAGGATTTAGAGGAACA...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CAA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGGCATTCAATCTCTGCTaGTTTACGCTTTGCTTCACT +
Preference number: 5 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLAFNLC*FTLCFT
Trigger: AGTGAAGCAAAGCGTAAACAAGCAGAGATTGAATGC...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CAA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTCTTGTTAAGCTGTCCTaGAAGCTTTCCTTCTTCTTT +
Preference number: 5 (lower is better)
Translates to: GKQIATKTLLESLVHNVPLVKLS*KLSFFF
Trigger: AAAGAAGAAGGAAAGCTTCAAGGACAGCTTAACAAG...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CAA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTATCATCTCACTTCACTaGGACATTGATAGCTTTCTG +
Preference number: 5 (lower is better)
Translates to: GKQIATKTLLESLVHNVPIISLH*DIDSFL
Trigger: CAGAAAGCTATCAATGTCCAAGTGAAGTGAGATGAT...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CAA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGCGGTGGGGGCAGAAATaGTGTAAAATTACATCTTTG +
Preference number: 5 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLRWGQK*CKITSL
Trigger: CAAAGATGTAATTTTACACAATTTCTGCCCCCACCG...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS GCA 90 bp ATCCTTGACTTGCTGTCTAAGTTCTTTCAAACCCATAATGGCTTCTaGTTCTCTAAGTTTCACAGCAATGAGTTCTTCCTGAAGCCTTGC +
Preference number: 5 (lower is better)
Translates to: ILDLLSKFFQTHNGF*FSKFHSNEFFLKPC
Trigger: GCAAGGCTTCAGGAAGAACTCATTGCTGTGAAACTTAGAGAAGCAGAAGCCATTATGGGTTTGAAAGAACTTAGACAGCAAGTCAAGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000370331.5
ENST00000468580.5
ENST00000491940.5
ENST00000492513.5
ENST00000492613.1
ENST00000540033.2
ENST00000684568.1
CDS-3UTR CAA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGTGCTTTTCCTTCTTTTaGCGTACATCTTCCCATTCA +
Preference number: 5 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLCFSFF*RTSSHS
Trigger: TGAATGGGAAGATGTACGCAAAAAGAAGGAAAAGCA...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CAA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGTGTTCCTCTAAATCCTaGACTTGCTGTCTAAGTTCT +
Preference number: 5 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLCSSKS*TCCLSS
Trigger: AGAACTTAGACAGCAAGTCAAGGATTTAGAGGAACA...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CAA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTACTTCTTCCTTATTCTaGCATTCAATCTCTGCTTGT +
Preference number: 5 (lower is better)
Translates to: GKQIATKTLLESLVHNVPTSSLF*HSISAC
Trigger: ACAAGCAGAGATTGAATGCAAGAATAAGGAAGAAGT...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CAA 90 bp GGCAAGCAAATAGCTACAAAAACCTTGCTGGAAAGCCTAGTCCACAACGTACCTTCTCCTATTAAATGGTaGACAATGTGGATTCCATCA +
Preference number: 5 (lower is better)
Translates to: GKQIATKTLLESLVHNVPSPIKW*TMWIPS
Trigger: TGATGGAATCCACATTGTCAACCATTTAATAGGAGA...AGGTACGTTGTGGACTAGGCTTTCCAGCAAGGTTTTTGTAGCTATTTGCTTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CAA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGATCATCTCACTTCACTaGGACATTGATAGCTTTCTG +
Preference number: 5 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLIISLH*DIDSFL
Trigger: CAGAAAGCTATCAATGTCCAAGTGAAGTGAGATGAT...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS-3UTR CAA 90 bp CTTGATGTGAGGGTCAAAGCAATAATGTGGCCATGCATCATCTCACTTCACTTGTTTTATTCACATCACTaGTATCCTCTACTCTCAGCT +
Preference number: 5 (lower is better)
Translates to: LDVRVKAIMWPCIISLHLFYSHH*YPLLSA
Trigger: AGCTGAGAGTAGAGGATACAAGTGATGTGAATAAAA...CAAGTGAAGTGAGATGATGCATGGCCACATTATTGCTTTGACCCTCACATCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS TCA 90 bp ATAATGGCTTCTGCTTCTCTAAGTTTCACAGCAATGAGTTCTTCCTaGAGCCTTGCAATATTATTCTCATCAGGAAGGGAGTTATTCCTC +
Preference number: 5 (lower is better)
Translates to: IMASASLSFTAMSSS*SLAILFSSGRELFL
Trigger: GAGGAATAACTCCCTTCCTGATGAGAATAATATTGCAAGGCTTCAGGAAGAACTCATTGCTGTGAAACTTAGAGAAGCAGAAGCCATTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000370331.5
ENST00000468580.5
ENST00000491940.5
ENST00000492613.1
ENST00000540033.2
ENST00000684568.1
CDS GCA 90 bp CTCCTGTATCATACATTCAAACTGGTACATACAAAGGCCCAATTCTaGCATACTTGGTTTAAAAAGTTCACGAAGTCTATAATCTTGCAT +
Preference number: 5 (lower is better)
Translates to: LLYHTFKLVHTKAQF*HTWFKKFTKSIILH
Trigger: ATGCAAGATTATAGACTTCGTGAACTTTTTAAACCAAGTATGGCAGAATTGGGCCTTTGTATGTACCAGTTTGAATGTATGATACAGGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370331.5
ENST00000540033.2
ENST00000684568.1
CDS GCA 72 bp TTCTTCTCGGGGGCCGCTCCTTTTGAACCACTTGGTTaGTCTCTCTGGTCTCCAGCACACTGTCTTCTGTTT +
Preference number: 6 (lower is better)
Translates to: FFSGAAPFEPLG*SLWSPAHCLLF
Trigger: AAACAGAAGACAGTGTGCTGGAGACCAGAGAGAGCAACCAAGTGGTTCAAAAGGAGCGGCCCCCGAGAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370331.5
ENST00000540033.2
ENST00000684568.1
CDS GCA 72 bp TCAGCTTGCTCCAGCTTAGCACTGGCCTCATCACTCTaGTGTTTGATGGTGGCCAACTCCCGTTTTATGAGG +
Preference number: 6 (lower is better)
Translates to: SACSSLALASSL*CLMVANSRFMR
Trigger: CCTCATAAAACGGGAGTTGGCCACCATCAAACAGCAGAGTGATGAGGCCAGTGCTAAGCTGGAGCAAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491940.5
ENST00000684568.1
CDS GCA 72 bp ACTGTCTTCTGTTTCGCTCTCACTACCATCTGCCACTaGGGGGTCCAAAGACATCGAACCAGATTTTCCGTG +
Preference number: 6 (lower is better)
Translates to: TVFCFALTTICH*GVQRHRTRFSV
Trigger: CACGGAAAATCTGGTTCGATGTCTTTGGACCCCGCAGTGGCAGATGGTAGTGAGAGCGAAACAGAAGACAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370331.5
ENST00000540033.2
ENST00000684568.1
CDS GCA 72 bp CAGCACACTGTCTTCTGTTTCGCTCTCACTACCATCTaGCACTGCGGGGTCCAAAGACATCGAACCAGATTT +
Preference number: 6 (lower is better)
Translates to: QHTVFCFALTTI*HCGVQRHRTRF
Trigger: AAATCTGGTTCGATGTCTTTGGACCCCGCAGTGGCAGATGGTAGTGAGAGCGAAACAGAAGACAGTGTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370331.5
ENST00000540033.2
ENST00000684568.1
CDS CAA 72 bp TTGTTGGTGCTGGAGCTTCCTGATGGTATTTTCAGCTaGCTCCAGCTTAGCACTGGCCTCATCACTCTGCTG +
Preference number: 6 (lower is better)
Translates to: LLVLELPDGIFS*LQLSTGLITLL
Trigger: CAGCAGAGTGATGAGGCCAGTGCTAAGCTGGAGCAAGCTGAAAATACCATCAGGAAGCTCCAGCACCAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491940.5
ENST00000684568.1
CDS CAA 72 bp ACCCATGAGAGAGTAGAGCTCAGCTTTTCTGCAACTTaGTCTGTCGCCACCTGTAATCCCAGCTACTCAGGA +
Preference number: 6 (lower is better)
Translates to: THERVELSFSAT*SVATCNPSYSG
Trigger: TCCTGAGTAGCTGGGATTACAGGTGGCGACAGACAAAGTTGCAGAAAAGCTGAGCTCTACTCTCTCATGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466778.2
CDS CAA 90 bp ATGCCATTGTTGTTGGTGCTGGAGCTTCCTGATGGTATTTTCAGCTaGCTCCAGCTTAGCACTGGCCTCATCACTCTGCTGTTTGATGGT +
Preference number: 6 (lower is better)
Translates to: MPLLLVLELPDGIFS*LQLSTGLITLLFDG
Trigger: ACCATCAAACAGCAGAGTGATGAGGCCAGTGCTAAGCTGGAGCAAGCTGAAAATACCATCAGGAAGCTCCAGCACCAACAACAATGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491940.5
ENST00000684568.1
CDS CAA 72 bp ACCCATGAGAGAGTAGAGCTCAGCTTTTCTGCAACTTaGTCTGTCGCCACCTGTTTCCCACTAGGGTTTCTA +
Preference number: 6 (lower is better)
Translates to: THERVELSFSAT*SVATCFPLGFL
Trigger: TAGAAACCCTAGTGGGAAACAGGTGGCGACAGACAAAGTTGCAGAAAAGCTGAGCTCTACTCTCTCATGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370331.5
ENST00000540033.2
CDS TCA 72 bp TCCAAGACTTTATCCTGCATCTCTTTTAATGCACACTaGGACTCAGCTTCACTCAGTCGGGCTTGGACCAAT +
Preference number: 6 (lower is better)
Translates to: SKTLSCISFNAH*DSASLSRAWTN
Trigger: ATTGGTCCAAGCCCGACTGAGTGAAGCTGAGTCTCAGTGTGCATTAAAAGAGATGCAGGATAAAGTCTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370331.5
ENST00000468580.5
ENST00000491940.5
ENST00000492613.1
ENST00000540033.2
ENST00000684568.1
CDS TCA 72 bp TTAGCTTGTCTGGGACACCATCAAACTGATGTGGAATaGCCTTTTGAAAGTGCTGTAACATCCCTTCCATGT +
Preference number: 6 (lower is better)
Translates to: LACLGHHQTDVE*PFESAVTSLPC
Trigger: ACATGGAAGGGATGTTACAGCACTTTCAAAAGGTCATTCCACATCAGTTTGATGGTGTCCCAGACAAGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370331.5
ENST00000540033.2
ENST00000684568.1
CDS CCA 72 bp AGCTCTGGAAGATGCTCCTGTATCATACATTCAAACTaGTACATACAAAGGCCCAATTCTGCCATACTTGGT +
Preference number: 6 (lower is better)
Translates to: SSGRCSCIIHSN*YIQRPNSAILG
Trigger: ACCAAGTATGGCAGAATTGGGCCTTTGTATGTACCAGTTTGAATGTATGATACAGGAGCATCTTCCAGAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370331.5
ENST00000540033.2
ENST00000684568.1
CDS CCA 72 bp CCTTCTCTAGCTGTAGCACAAAATCTTCGTTGTAGTTaGAACTGCATTTATGCCATTGTTGTTGGTGCTGGA +
Preference number: 6 (lower is better)
Translates to: PSLAVAQNLRCS*NCIYAIVVGAG
Trigger: TCCAGCACCAACAACAATGGCATAAATGCAGTTCCAACTACAACGAAGATTTTGTGCTACAGCTAGAGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491940.5
ENST00000684568.1
CDS TCA 72 bp TCTGCTTCTCTAAGTTTCACAGCAATGAGTTCTTCCTaGAGCCTTGCAATATTATTCTCATCAGGAAGGGAG +
Preference number: 6 (lower is better)
Translates to: SASLSFTAMSSS*SLAILFSSGRE
Trigger: CTCCCTTCCTGATGAGAATAATATTGCAAGGCTTCAGGAAGAACTCATTGCTGTGAAACTTAGAGAAGCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000370331.5
ENST00000468580.5
ENST00000491940.5
ENST00000492513.5
ENST00000492613.1
ENST00000540033.2
ENST00000684568.1
CDS TCA 72 bp TCACAAGGCGAGGTCATTTTCAGGAGTTCTGAATACTaGTCCTTAATTGGCATACTTTGTGCACTGCATAAA +
Preference number: 6 (lower is better)
Translates to: SQGEVIFRSSEY*SLIGILCALHK
Trigger: TTTATGCAGTGCACAAAGTATGCCAATTAAGGATCAGTATTCAGAACTCCTGAAAATGACCTCGCCTTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370331.5
ENST00000540033.2
ENST00000684568.1
CDS TCA 72 bp AGGAATGGAATGATTCATCATCTCCTATTAAATGGTTaGCAATGTGGATTCCATCAAAAGGAGGTTGGCCTG +
Preference number: 6 (lower is better)
Translates to: RNGMIHHLLLNG*QCGFHQKEVGL
Trigger: CAGGCCAACCTCCTTTTGATGGAATCCACATTGTCAACCATTTAATAGGAGATGATGAATCATTCCATTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370331.5
ENST00000540033.2
ENST00000684568.1
CDS CCA 72 bp CCTTCTCTAGCTGTAGCACAAAATCTTCGTTGTAGTTaGAACTGCATTTATGCTGTATCAATCTATCTGCCA +
Preference number: 6 (lower is better)
Translates to: PSLAVAQNLRCS*NCIYAVSIYLP
Trigger: TGGCAGATAGATTGATACAGCATAAATGCAGTTCCAACTACAACGAAGATTTTGTGCTACAGCTAGAGAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468580.5
ENST00000540033.2
CDS CAA 72 bp ATGAACTCGACACAAGAGAAGAGCCACTGTTTCTTCTaGACCCATTTACAGATCTTAAAGACTTACTATCCG +
Preference number: 6 (lower is better)
Translates to: MNSTQEKSHCFF*THLQILKTYYP
Trigger: CGGATAGTAAGTCTTTAAGATCTGTAAATGGGTCAAGAAGAAACAGTGGCTCTTCTCTTGTGTCGAGTTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370331.5
ENST00000474806.1
ENST00000540033.2
ENST00000684568.1
CDS TCA 72 bp CAATTTTTCACAAGGCGAGGTCATTTTCAGGAGTTCTaGATACTGATCCTTAATTGGCATACTTTGTGCACT +
Preference number: 6 (lower is better)
Translates to: QFFTRRGHFQEF*ILILNWHTLCT
Trigger: AGTGCACAAAGTATGCCAATTAAGGATCAGTATTCAGAACTCCTGAAAATGACCTCGCCTTGTGAAAAATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370331.5
ENST00000540033.2
ENST00000684568.1
CDS TCA 72 bp TCAATCTCTGCTTGTTTACGCTTTGCTTCACTTAATTaGGTAAGGAGTCCTTTGTTCTGTGCAGAAAGATAC +
Preference number: 6 (lower is better)
Translates to: SISACLRFASLN*VRSPLFCAERY
Trigger: GTATCTTTCTGCACAGAACAAAGGACTCCTTACTCAATTAAGTGAAGCAAAGCGTAAACAAGCAGAGATTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370331.5
ENST00000491940.5
ENST00000492513.5
ENST00000540033.2
ENST00000684568.1
CDS GCA 72 bp CATACATTCAAACTGGTACATACAAAGGCCCAATTCTaGCATACTTGGTTTAAAAAGTTCACGAAGTCTATA +
Preference number: 6 (lower is better)
Translates to: HTFKLVHTKAQF*HTWFKKFTKSI
Trigger: TATAGACTTCGTGAACTTTTTAAACCAAGTATGGCAGAATTGGGCCTTTGTATGTACCAGTTTGAATGTATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370331.5
ENST00000540033.2
ENST00000684568.1
CDS CCA 72 bp AAACTGGTACATACAAAGGCCCAATTCTGCCATACTTaGTTTAAAAAGTTCACGAAGTCTATAATCTTGCAT +
Preference number: 6 (lower is better)
Translates to: KLVHTKAQFCHT*FKKFTKSIILH
Trigger: ATGCAAGATTATAGACTTCGTGAACTTTTTAAACCAAGTATGGCAGAATTGGGCCTTTGTATGTACCAGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370331.5
ENST00000540033.2
ENST00000684568.1