RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EVC2 (Homo sapiens)

Ensembl gene IDs: ENSG00000173040

Ensembl transcript IDs: ENST00000310917.6, ENST00000344408.10, ENST00000475313.5, ENST00000509670.1

Found 931 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACCTCCCCAGGTTCGTTCAGAATCCCGGGCCCATCGGCCACCCACTaGTGCCAGCTCGCCAGGGCCTGCTGCTGCTGGGCTGCCTCCTGC +
Preference number: 1 (lower is better)
Translates to: TSPGSFRIPGPSATH*CQLARACCCWAASC
Trigger: GCAGGAGGCAGCCCAGCAGCAGCAGGCCCTGGCGAGCTGGCAGCAGTGGGTGGCCGATGGGCCCGGGATTCTGAACGAACCTGGGGAGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR CCA 90 bp CCATCGGCCACCCACTGCTGCCAGCTCGCCAGGGCCTGCTGCTGCTaGGCTGCCTCCTGCTGCACCAGCTGGTCCTCCAGCTTCCTCTCC +
Preference number: 1 (lower is better)
Translates to: PSATHCCQLARACCC*AASCCTSWSSSFLS
Trigger: GGAGAGGAAGCTGGAGGACCAGCTGGTGCAGCAGGAGGCAGCCCAGCAGCAGCAGGCCCTGGCGAGCTGGCAGCAGTGGGTGGCCGATGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR GCA 90 bp TCCTCCCCCTCCAGCTGCTCGGCCCGTGCAGCCATCTCCTTGCCGTaGTCCTCCAGGATCTGCTGCAGGAAGAGCCAGGGCACCCCACGC +
Preference number: 1 (lower is better)
Translates to: SSPSSCSARAAISLP*SSRICCRKSQGTPR
Trigger: GCGTGGGGTGCCCTGGCTCTTCCTGCAGCAGATCCTGGAGGAGCACGGCAAGGAGATGGCTGCACGGGCCGAGCAGCTGGAGGGGGAGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR GCA 90 bp GGCCACCCACTGCTGCCAGCTCGCCAGGGCCTGCTGCTGCTGGGCTaGCTCCTGCTGCACCAGCTGGTCCTCCAGCTTCCTCTCCAACTC +
Preference number: 1 (lower is better)
Translates to: GHPLLPARQGLLLLG*LLLHQLVLQLPLQL
Trigger: GAGTTGGAGAGGAAGCTGGAGGACCAGCTGGTGCAGCAGGAGGCAGCCCAGCAGCAGCAGGCCCTGGCGAGCTGGCAGCAGTGGGTGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR CCA 90 bp CTGCCCACGTCGGCCTGCTCCGCTCCGCCATCGCTCTCAGCTGCGTaGTCCACATGTCTCTCGGTGGCCGAATCCAGCAGGGCCAGCAGC +
Preference number: 1 (lower is better)
Translates to: LPTSACSAPPSLSAA*STCLSVAESSRASS
Trigger: GCTGCTGGCCCTGCTGGATTCGGCCACCGAGAGACATGTGGACCACGCAGCTGAGAGCGATGGCGGAGCGGAGCAGGCCGACGTGGGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR CCA 90 bp GCAGTACCACACTCAGGAGCCGGCGAAGCGTGGCCCCGGGCACCATaGCCATCCTCGCCAGGTACGATGCCAGTCTCAGCTCCTGGCTGC +
Preference number: 1 (lower is better)
Translates to: AVPHSGAGEAWPRAP*PSSPGTMPVSAPGC
Trigger: GCAGCCAGGAGCTGAGACTGGCATCGTACCTGGCGAGGATGGCCATGGTGCCCGGGGCCACGCTTCGCCGGCTCCTGAGTGTGGTACTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR CCA 90 bp GCTGTGAGGCTGTGGGCAGTACCACACTCAGGAGCCGGCGAAGCGTaGCCCCGGGCACCATGGCCATCCTCGCCAGGTACGATGCCAGTC +
Preference number: 1 (lower is better)
Translates to: AVRLWAVPHSGAGEA*PRAPWPSSPGTMPV
Trigger: GACTGGCATCGTACCTGGCGAGGATGGCCATGGTGCCCGGGGCCACGCTTCGCCGGCTCCTGAGTGTGGTACTGCCCACAGCCTCACAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR CCA 90 bp GTGGCACCGTGCTCCTCCATCAGGCTCCTCTTCTGGTGCAGGTACTaGCCGGCATCCTCAACCGTTCGGAAGGCCTCGCCGACGGACGCC +
Preference number: 1 (lower is better)
Translates to: VAPCSSIRLLFWCRY*PASSTVRKASPTDA
Trigger: GGCGTCCGTCGGCGAGGCCTTCCGAACGGTTGAGGATGCCGGCCAGTACCTGCACCAGAAGAGGAGCCTGATGGAGGAGCACGGTGCCAC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR GCA 90 bp TCCTCCAGGGTGGCACCGTGCTCCTCCATCAGGCTCCTCTTCTGGTaGAGGTACTGGCCGGCATCCTCAACCGTTCGGAAGGCCTCGCCG +
Preference number: 1 (lower is better)
Translates to: SSRVAPCSSIRLLFW*RYWPASSTVRKASP
Trigger: CGGCGAGGCCTTCCGAACGGTTGAGGATGCCGGCCAGTACCTGCACCAGAAGAGGAGCCTGATGGAGGAGCACGGTGCCACCCTGGAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR CCA 90 bp AGCTCCTCCAGGGTGGCACCGTGCTCCTCCATCAGGCTCCTCTTCTaGTGCAGGTACTGGCCGGCATCCTCAACCGTTCGGAAGGCCTCG +
Preference number: 1 (lower is better)
Translates to: SSSRVAPCSSIRLLF*CRYWPASSTVRKAS
Trigger: CGAGGCCTTCCGAACGGTTGAGGATGCCGGCCAGTACCTGCACCAGAAGAGGAGCCTGATGGAGGAGCACGGTGCCACCCTGGAGGAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR TCA 90 bp GAAGAGCCAGGGCACCCCACGCTTGAGCAGCTCCTGGGTCATGGCTaGGTTCTGCAGGCGCCGCAGCTCGTCGGTGGCCTTTTCAAACAG +
Preference number: 1 (lower is better)
Translates to: EEPGHPTLEQLLGHG*VLQAPQLVGGLFKQ
Trigger: CTGTTTGAAAAGGCCACCGACGAGCTGCGGCGCCTGCAGAACTCAGCCATGACCCAGGAGCTGCTCAAGCGTGGGGTGCCCTGGCTCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR TCA 90 bp ACGGCCTGGTCCAGCTTCACGAACTCTGCTTCTCGCCACGCAGTCTaGAATTGCTGCAGCAGAACTCGGGCCCGGATCTTGGGGAGGGCC +
Preference number: 1 (lower is better)
Translates to: TAWSSFTNSASRHAV*NCCSRTRARILGRA
Trigger: GGCCCTCCCCAAGATCCGGGCCCGAGTTCTGCTGCAGCAATTTCAGACTGCGTGGCGAGAAGCAGAGTTCGTGAAGCTGGACCAGGCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR GCA 90 bp TGGCCGGCATCCTCAACCGTTCGGAAGGCCTCGCCGACGGACGCCTaGTCCCTACGCTGCTCCCTGTGCTTTTGTAGCAACTCTCGTCTT +
Preference number: 1 (lower is better)
Translates to: WPASSTVRKASPTDA*SLRCSLCFCSNSRL
Trigger: AAGACGAGAGTTGCTACAAAAGCACAGGGAGCAGCGTAGGGAGCAGGCGTCCGTCGGCGAGGCCTTCCGAACGGTTGAGGATGCCGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR GCA 90 bp CTGCAGCTCAGGGGCAGCCACGGCCTGGTCCAGCTTCACGAACTCTaGTTCTCGCCACGCAGTCTGAAATTGCTGCAGCAGAACTCGGGC +
Preference number: 1 (lower is better)
Translates to: LQLRGSHGLVQLHEL*FSPRSLKLLQQNSG
Trigger: GCCCGAGTTCTGCTGCAGCAATTTCAGACTGCGTGGCGAGAAGCAGAGTTCGTGAAGCTGGACCAGGCCGTGGCTGCCCCTGAGCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR GCA 90 bp CAGAGCTTCATGAAGATCAGGTGCTCCCAGCGTCGCAGCTCTGCCTaGTCCTCTGTCACGGCCTCAGGAGCGTCATCCTTCAGTCTCTGC +
Preference number: 1 (lower is better)
Translates to: QSFMKIRCSQRRSSA*SSVTASGASSFSLC
Trigger: GCAGAGACTGAAGGATGACGCTCCTGAGGCCGTGACAGAGGAGCAGGCAGAGCTGCGACGCTGGGAGCACCTGATCTTCATGAAGCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR GCA 90 bp GGAGCAGAGCTTCATGAAGATCAGGTGCTCCCAGCGTCGCAGCTCTaGCTGCTCCTCTGTCACGGCCTCAGGAGCGTCATCCTTCAGTCT +
Preference number: 1 (lower is better)
Translates to: GAELHEDQVLPASQL*LLLCHGLRSVILQS
Trigger: AGACTGAAGGATGACGCTCCTGAGGCCGTGACAGAGGAGCAGGCAGAGCTGCGACGCTGGGAGCACCTGATCTTCATGAAGCTCTGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR CCA 90 bp GCCACGCAGTCTGAAATTGCTGCAGCAGAACTCGGGCCCGGATCTTaGGGAGGGCCAAGCTCCTGTCCATCTGAGCAAAGCAGCCATGGA +
Preference number: 1 (lower is better)
Translates to: ATQSEIAAAELGPGS*GGPSSCPSEQSSHG
Trigger: TCCATGGCTGCTTTGCTCAGATGGACAGGAGCTTGGCCCTCCCCAAGATCCGGGCCCGAGTTCTGCTGCAGCAATTTCAGACTGCGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR GCA 90 bp GCAACAAGCGACTGTGCAAAGCCTCCCTCCTGTGCCTCCATCCGCTaGACTCTCTCCCGCAGCAATTCACCTCGAACCTTTTCCACCAGG +
Preference number: 1 (lower is better)
Translates to: ATSDCAKPPSCASIR*TLSRSNSPRTFSTR
Trigger: CCTGGTGGAAAAGGTTCGAGGTGAATTGCTGCGGGAGAGAGTGCAGCGGATGGAGGCACAGGAGGGAGGCTTTGCACAGTCGCTTGTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR GCA 90 bp CTGGAACTGCAGAGCAACAAGCGACTGTGCAAAGCCTCCCTCCTGTaGCTCCATCCGCTGCACTCTCTCCCGCAGCAATTCACCTCGAAC +
Preference number: 1 (lower is better)
Translates to: LELQSNKRLCKASLL*LHPLHSLPQQFTSN
Trigger: GTTCGAGGTGAATTGCTGCGGGAGAGAGTGCAGCGGATGGAGGCACAGGAGGGAGGCTTTGCACAGTCGCTTGTTGCTCTGCAGTTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR GCA 90 bp CGACTCCAGGATCTGTGTGCAGGCCGACTTGGTCAGCATCTCAGATaGACTCAGCTCTTCCAGGAGCAAGTCCTGGATGCTGAGGAGGGC +
Preference number: 1 (lower is better)
Translates to: RLQDLCAGRLGQHLR*TQLFQEQVLDAEEG
Trigger: GCCCTCCTCAGCATCCAGGACTTGCTCCTGGAAGAGCTGAGTGCATCTGAGATGCTGACCAAGTCGGCCTGCACACAGATCCTGGAGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR GCA 90 bp TCTCCAACTCCTGGAGCTCCCGGCTGTGCGACTCCAGGATCTGTGTaGAGGCCGACTTGGTCAGCATCTCAGATGCACTCAGCTCTTCCA +
Preference number: 1 (lower is better)
Translates to: SPTPGAPGCATPGSV*RPTWSASQMHSALP
Trigger: TGGAAGAGCTGAGTGCATCTGAGATGCTGACCAAGTCGGCCTGCACACAGATCCTGGAGTCGCACAGCCGGGAGCTCCAGGAGTTGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR TCA 90 bp TCCTGTCCATCTGAGCAAAGCAGCCATGGACCTCCTGCCTCATCCTaGGCAGCTCCTCTTCAGACAGGGAGAAGACTGAGGAGCAGAGCT +
Preference number: 1 (lower is better)
Translates to: SCPSEQSSHGPPASS*AAPLQTGRRLRSRA
Trigger: AGCTCTGCTCCTCAGTCTTCTCCCTGTCTGAAGAGGAGCTGCTCAGGATGAGGCAGGAGGTCCATGGCTGCTTTGCTCAGATGGACAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR GCA 90 bp AATGTCTGGCTCTTGCTCAGGGCTTGGTGCAGGACAGTAGAGACCTaGCTTTCAGAATCCACCTCCCCAGGTTCGTTCAGAATCCCGGGC +
Preference number: 1 (lower is better)
Translates to: NVWLLLRAWCRTVET*LSESTSPGSFRIPG
Trigger: GCCCGGGATTCTGAACGAACCTGGGGAGGTGGATTCTGAAAGGCAGGTCTCTACTGTCCTGCACCAAGCCCTGAGCAAGAGCCAGACATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR CCA 90 bp GCTGCAGCGGTGCTCAGAAGGCCCTGCACACGGGTCTCTGATGACTaGAGGTTCTGGACCAGATATTCCCTGTGGCCAAATCTTTTACTT +
Preference number: 1 (lower is better)
Translates to: AAAVLRRPCTRVSDD*RFWTRYSLWPNLLL
Trigger: AAGTAAAAGATTTGGCCACAGGGAATATCTGGTCCAGAACCTCCAGTCATCAGAGACCCGTGTGCAGGGCCTTCTGAGCACCGCTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR TCA 90 bp GATGCACTTCTTCAGAAGCTCTCCCTTGCTTTTACTCTTGGACCGTaGCTTTCTCACCTTGGACTGTTGCTGCAGCTCAGGGGCAGCCAC +
Preference number: 1 (lower is better)
Translates to: DALLQKLSLAFTLGP*LSHLGLLLQLRGSH
Trigger: GTGGCTGCCCCTGAGCTGCAGCAACAGTCCAAGGTGAGAAAGTCACGGTCCAAGAGTAAAAGCAAGGGAGAGCTTCTGAAGAAGTGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR CCA 90 bp GCTTCTCTCCTGTGTTTAATAGATCAATGGTTTCTGCCCCTACAATaGGTACAGGGGCCAGTTCGCCAATGGGCTCCAGTGACAGGTGTG +
Preference number: 1 (lower is better)
Translates to: ASLLCLIDQWFLPLQ*VQGPVRQWAPVTGV
Trigger: CACACCTGTCACTGGAGCCCATTGGCGAACTGGCCCCTGTACCCATTGTAGGGGCAGAAACCATTGATCTATTAAACACAGGAGAGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR CCA 90 bp AAAATCATCCCTTCTCTCTTCAGATGCTCCCGCAGGTCTTTCCCTTaGGCTAGTCCATGCCCAAGGCCCTCATGGCCTTTTTGGCATTCA +
Preference number: 1 (lower is better)
Translates to: KIIPSLFRCSRRSFP*ASPCPRPSWPFWHS
Trigger: TGAATGCCAAAAAGGCCATGAGGGCCTTGGGCATGGACTAGCCCAAGGGAAAGACCTGCGGGAGCATCTGAAGAGAGAAGGGATGATTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR GCA 90 bp TGCTCTGCTTTCTCTTGCGGGCCCACAGCATCTTTTCTAATCCTCTaGTTATCAGATCTCCTCGCAGTTTGCCATCTAAGGCTTGCCACC +
Preference number: 1 (lower is better)
Translates to: CSAFSCGPTASFLIL*LSDLLAVCHLRLAT
Trigger: GGTGGCAAGCCTTAGATGGCAAACTGCGAGGAGATCTGATAAGCAGAGGATTAGAAAAGATGCTGTGGGCCCGCAAGAGAAAGCAGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR GCA 90 bp TCTCTCTTCAGATGCTCCCGCAGGTCTTTCCCTTGGGCTAGTCCATaGCCAAGGCCCTCATGGCCTTTTTGGCATTCAAAAAGTTCTTCT +
Preference number: 1 (lower is better)
Translates to: SLFRCSRRSFPWASP*PRPSWPFWHSKSSS
Trigger: AGAAGAACTTTTTGAATGCCAAAAAGGCCATGAGGGCCTTGGGCATGGACTAGCCCAAGGGAAAGACCTGCGGGAGCATCTGAAGAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR CCA 90 bp TGTCTTCGATGCACTTCTTCAGAAGCTCTCCCTTGCTTTTACTCTTaGACCGTGACTTTCTCACCTTGGACTGTTGCTGCAGCTCAGGGG +
Preference number: 1 (lower is better)
Translates to: CLRCTSSEALPCFYS*TVTFSPWTVAAAQG
Trigger: CCCCTGAGCTGCAGCAACAGTCCAAGGTGAGAAAGTCACGGTCCAAGAGTAAAAGCAAGGGAGAGCTTCTGAAGAAGTGCATCGAAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR TCA 90 bp GGCCCTGGGGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTaGTATGGAAGAGAGTGGGCCATCTGGAAATTCATGAGACAAGAT +
Preference number: 1 (lower is better)
Translates to: GPGEVGLKEGVFMSL*YGREWAIWKFMRQD
Trigger: ATCTTGTCTCATGAATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCCCCAGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
3UTR GCA 90 bp TGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTaGTCAGTCCGAGGTAACTCATCTATGTTTGGGACAAACTTGCAG +
Preference number: 1 (lower is better)
Translates to: CSRAILRKQRLQRLH*SVRGNSSMFGTNLQ
Trigger: CTGCAAGTTTGTCCCAAACATAGATGAGTTACCTCGGACTGAGCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
3UTR GCA 90 bp CTTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTaGACTGCTCAGTCCGAGGTAACTCATCTATGTTTGGGACAAACT +
Preference number: 1 (lower is better)
Translates to: LGVPGPYYANRGSND*TAQSEVTHLCLGQT
Trigger: AGTTTGTCCCAAACATAGATGAGTTACCTCGGACTGAGCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
3UTR GCA 90 bp GGTCTTCAGAGGCCTGTTCCTCACAGAGGTGAATTTTGTCTTCGATaGACTTCTTCAGAAGCTCTCCCTTGCTTTTACTCTTGGACCGTG +
Preference number: 1 (lower is better)
Translates to: GLQRPVPHRGEFCLR*TSSEALPCFYSWTV
Trigger: CACGGTCCAAGAGTAAAAGCAAGGGAGAGCTTCTGAAGAAGTGCATCGAAGACAAAATTCACCTCTGTGAGGAACAGGCCTCTGAAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR TCA 90 bp TTATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATTCATaGGACAAGATTAAACCGAGTCCCTGCAAGTTGGCATGCGCTACG +
Preference number: 1 (lower is better)
Translates to: LCPCDMEESGPSGNS*DKIKPSPCKLACAT
Trigger: CGTAGCGCATGCCAACTTGCAGGGACTCGGTTTAATCTTGTCTCATGAATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
3UTR GCA 90 bp TCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTaGAATTTATATTTGCGAGTTGTGCATTATAAACACACAAACACC +
Preference number: 1 (lower is better)
Translates to: SLQVGMRYGVCAFCM*NLYLRVVHYKHTNT
Trigger: GGTGTTTGTGTGTTTATAATGCACAACTCGCAAATATAAATTGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
3UTR CCA 90 bp CATCTGGAAATTCATGAGACAAGATTAAACCGAGTCCCTGCAAGTTaGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCAATTTATA +
Preference number: 1 (lower is better)
Translates to: HLEIHETRLNRVPAS*HALRGLCLLHVQFI
Trigger: TATAAATTGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGGTTTAATCTTGTCTCATGAATTTCCAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
3UTR GCA 90 bp AGAGGTGAATTTTGTCTTCGATGCACTTCTTCAGAAGCTCTCCCTTaGTTTTACTCTTGGACCGTGACTTTCTCACCTTGGACTGTTGCT +
Preference number: 1 (lower is better)
Translates to: RGEFCLRCTSSEALP*FYSWTVTFSPWTVA
Trigger: AGCAACAGTCCAAGGTGAGAAAGTCACGGTCCAAGAGTAAAAGCAAGGGAGAGCTTCTGAAGAAGTGCATCGAAGACAAAATTCACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR CCA 90 bp TGGGGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATaGAAGAGAGTGGGCCATCTGGAAATTCATGAGACAAGATTAAAC +
Preference number: 1 (lower is better)
Translates to: WGGGAERRSVYVLVI*KRVGHLEIHETRLN
Trigger: GTTTAATCTTGTCTCATGAATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
3UTR TCA 90 bp TTTAAGTCATTGTCCAACTTCTGCTTGATTGAAAAGACTTCTGTCTaGGCCCGCTCCAATAGCATTTCCATTTGGTCTTCATCCAGGTAC +
Preference number: 1 (lower is better)
Translates to: FKSLSNFCLIEKTSV*ARSNSISIWSSSRY
Trigger: GTACCTGGATGAAGACCAAATGGAAATGCTATTGGAGCGGGCTCAGACAGAAGTCTTTTCAATCAAGCAGAAGTTGGACAATGACTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR TCA 90 bp TTTGGCATTCAAAAAGTTCTTCTTTTTCCTGGGAGGAACGTGCAGTaGGATCTCTGGCTCCTTTGGATTTCTGAATATAAAGAGCTTCTC +
Preference number: 1 (lower is better)
Translates to: FGIQKVLLFPGRNVQ*DLWLLWISEYKELL
Trigger: GAGAAGCTCTTTATATTCAGAAATCCAAAGGAGCCAGAGATCTCACTGCACGTTCCTCCCAGGAAAAAGAAGAACTTTTTGAATGCCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR TCA 90 bp AGGTTCTGGACCAGATATTCCCTGTGGCCAAATCTTTTACTTAGATaGTACCTCTTACTAGCCTGGAAAAAGTCCATTAACTCTTCTACA +
Preference number: 1 (lower is better)
Translates to: RFWTRYSLWPNLLLR*YLLLAWKKSINSST
Trigger: TGTAGAAGAGTTAATGGACTTTTTCCAGGCTAGTAAGAGGTATCATCTAAGTAAAAGATTTGGCCACAGGGAATATCTGGTCCAGAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR GCA 90 bp GCTGTGAGGCTGTGGGCAGTACCACACTCAGGAGCCGGCGAAGCGTGGCCCCGGGCTGGGCTGCAGCGGTaGTCAGAAGGCCCTGCACAC +
Preference number: 2 (lower is better)
Translates to: AVRLWAVPHSGAGEAWPRAGLQR*SEGPAH
Trigger: GTGTGCAGGGCCTTCTGAGCACCGCTGCAGCCCAGC...CCGGGGCCACGCTTCGCCGGCTCCTGAGTGTGGTACTGCCCACAGCCTCACAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR TCA 90 bp CCATCGCTCTCAGCTGCGTGGTCCACATGTCTCTCGGTGGCCGAATCCAGCAGGAAAGGGTCAGGGTCCTaGGATCGTCCAGGGCGGCCT +
Preference number: 2 (lower is better)
Translates to: PSLSAAWSTCLSVAESSRKGSGS*DRPGRP
Trigger: AGGCCGCCCTGGACGATCTCAGGACCCTGACCCTTT...CCTGCTGGATTCGGCCACCGAGAGACATGTGGACCACGCAGCTGAGAGCGATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR GCA 90 bp CCATCGCTCTCAGCTGCGTGGTCCACATGTCTCTCGGTGGCCGAATCCAGCAGGTGGTCCAGACGCTCCTaGAGCTCCTCCAGGGTGGCA +
Preference number: 2 (lower is better)
Translates to: PSLSAAWSTCLSVAESSRWSRRS*SSSRVA
Trigger: TGCCACCCTGGAGGAGCTGCAGGAGCGTCTGGACCA...CCTGCTGGATTCGGCCACCGAGAGACATGTGGACCACGCAGCTGAGAGCGATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR CCA 90 bp AGGCGCCGCAGCTCGTCGGTGGCCTTTTCAAACAGCGAAAGGGTCAGGGTCCTGGCAGCTCCTCCAGGGTaGCACCGTGCTCCTCCATCA +
Preference number: 2 (lower is better)
Translates to: RRRSSSVAFSNSERVRVLAAPPG*HRAPPS
Trigger: TGATGGAGGAGCACGGTGCCACCCTGGAGGAGCTGC...CAGGACCCTGACCCTTTCGCTGTTTGAAAAGGCCACCGACGAGCTGCGGCGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR GCA 90 bp CAGGGTGGCACCGTGCTCCTCCATCAGGCTCCTCTTCTGGTGCAGGTACTGGCCGCCTGCTCCCTACGCTaGTCCCTGTGCTTTTGTAGC +
Preference number: 2 (lower is better)
Translates to: QGGTVLLHQAPLLVQVLAACSLR*SLCFCS
Trigger: GCTACAAAAGCACAGGGAGCAGCGTAGGGAGCAGGC...GGCCAGTACCTGCACCAGAAGAGGAGCCTGATGGAGGAGCACGGTGCCACCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR GCA 90 bp CCATCGCTCTCAGCTGCGTGGTCCACATGTCTCTCGGTGGCCGAATCCAGCAGGTCCTCCAGGATCTGCTaGAGGAAGAGCCAGGGCACC +
Preference number: 2 (lower is better)
Translates to: PSLSAAWSTCLSVAESSRSSRIC*RKSQGT
Trigger: GGTGCCCTGGCTCTTCCTGCAGCAGATCCTGGAGGA...CCTGCTGGATTCGGCCACCGAGAGACATGTGGACCACGCAGCTGAGAGCGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR GCA 90 bp CCATCGCTCTCAGCTGCGTGGTCCACATGTCTCTCGGTGGCCGAATCCAGCAGGGCCATCTCCTTGCCGTaGTCCTCCAGGATCTGCTGC +
Preference number: 2 (lower is better)
Translates to: PSLSAAWSTCLSVAESSRAISLP*SSRICC
Trigger: GCAGCAGATCCTGGAGGAGCACGGCAAGGAGATGGC...CCTGCTGGATTCGGCCACCGAGAGACATGTGGACCACGCAGCTGAGAGCGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR CAA 90 bp CTGGTCCAGCTTCACGAACTCTGCTTCTCGCCACGCAGTCTGAAATaGCTGCAGCAGAACTCGGGCCCGGATCTTGGGGAGGGCCAAGCT +
Preference number: 2 (lower is better)
Translates to: LVQLHELCFSPRSLK*LQQNSGPDLGEGQA
Trigger: AGCTTGGCCCTCCCCAAGATCCGGGCCCGAGTTCTGCTGCAGCAATTTCAGACTGCGTGGCGAGAAGCAGAGTTCGTGAAGCTGGACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR CAA 90 bp TGGAGCTCCCGGCTGTGCGACTCCAGGATCTGTGTGCAGGCCGACTaGGTCAGCATCTCAGATGCACTCAGCTCTTCCAGGAGCAAGTCC +
Preference number: 2 (lower is better)
Translates to: WSSRLCDSRICVQAD*VSISDALSSSRSKS
Trigger: GGACTTGCTCCTGGAAGAGCTGAGTGCATCTGAGATGCTGACCAAGTCGGCCTGCACACAGATCCTGGAGTCGCACAGCCGGGAGCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR TCA 90 bp CGGCCTCAGGAGCGTCATCCTTCAGTCTCTGCCTCACGCTCTGGACACCCTCCTTCTCGTGCTTCTGAATaGGGTGAGTCAGCTGGGCTG +
Preference number: 2 (lower is better)
Translates to: RPQERHPSVSASRSGHPPSRASE*GESAGL
Trigger: CAGCCCAGCTGACTCACCTCATTCAGAAGCACGAGA...AGGAGGGTGTCCAGAGCGTGAGGCAGAGACTGAAGGATGACGCTCCTGAGGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR GCA 90 bp CCAGCTTCACGAACTCTGCTTCTCGCCACGCAGTCTGAAATTGCTGCAGCAGAATCGCCGACGGACGCCTaGTCCCTACGCTGCTCCCTG +
Preference number: 2 (lower is better)
Translates to: PASRTLLLATQSEIAAAESPTDA*SLRCSL
Trigger: CAGGGAGCAGCGTAGGGAGCAGGCGTCCGTCGGCGA...TTCTGCTGCAGCAATTTCAGACTGCGTGGCGAGAAGCAGAGTTCGTGAAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR CCA 90 bp AGGCCGACTTGGTCAGCATCTCAGATGCACTCAGCTCTTCCAGGAGCAAGTCCTCTCGGGCCCGGATCTTaGGGAGGGCCAAGCTCCTGT +
Preference number: 2 (lower is better)
Translates to: RPTWSASQMHSALPGASPLGPGS*GGPSSC
Trigger: ACAGGAGCTTGGCCCTCCCCAAGATCCGGGCCCGAG...AGGACTTGCTCCTGGAAGAGCTGAGTGCATCTGAGATGCTGACCAAGTCGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR CCA 90 bp CTCGCCACGCAGTCTGAAATTGCTGCAGCAGAACTCGGGCCCGGATCTTGGGGATTCTGGTGCAGGTACTaGCCGGCATCCTCAACCGTT +
Preference number: 2 (lower is better)
Translates to: LATQSEIAAAELGPGSWGFWCRY*PASSTV
Trigger: AACGGTTGAGGATGCCGGCCAGTACCTGCACCAGAA...TCCCCAAGATCCGGGCCCGAGTTCTGCTGCAGCAATTTCAGACTGCGTGGCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR GCA 90 bp CCGGATCTTGGGGAGGGCCAAGCTCCTGTCCATCTGAGCAAAGCAGCCATGGACCCTTCTCTCTTCAGATaGTCCCGCAGGTCTTTCCCT +
Preference number: 2 (lower is better)
Translates to: PDLGEGQAPVHLSKAAMDPSLFR*SRRSFP
Trigger: AGGGAAAGACCTGCGGGAGCATCTGAAGAGAGAAGG...GTCCATGGCTGCTTTGCTCAGATGGACAGGAGCTTGGCCCTCCCCAAGATCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR GCA 90 bp CTTTCCCTTGGGCTAGTCCATGCCCAAGGCCCTCATGGCCTTTTTGGCATTCAAGTGAGTCAGCTGGGCTaGAGCGGTGCTCAGAAGGCC +
Preference number: 2 (lower is better)
Translates to: LSLGLVHAQGPHGLFGIQVSQLG*SGAQKA
Trigger: GGCCTTCTGAGCACCGCTGCAGCCCAGCTGACTCAC...TTGAATGCCAAAAAGGCCATGAGGGCCTTGGGCATGGACTAGCCCAAGGGAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR GCA 90 bp CTCTTCAGATGCTCCCGCAGGTCTTTCCCTTGGGCTAGTCCATGCCCAAGGCCCTTGCCATCTAAGGCTTaGCACCAGCTCTGGTGTTTC +
Preference number: 2 (lower is better)
Translates to: LFRCSRRSFPWASPCPRPLPSKA*HQLWCF
Trigger: GAAACACCAGAGCTGGTGGCAAGCCTTAGATGGCAA...GGGCCTTGGGCATGGACTAGCCCAAGGGAAAGACCTGCGGGAGCATCTGAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR CCA 90 bp AGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTCGAGTCCCTGCAAGTTaGCATGCGCTACGGGGTCTG +
Preference number: 2 (lower is better)
Translates to: RESGCHHTDHSFCSRGWGRVPAS*HALRGL
Trigger: CAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCG...ACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
3UTR-3UTR CCA 90 bp GCAGCTCTGCCTGCTCCTCTGTCACGGCCTCAGGAGCGTCATCCTTCAGTCTCTCGGGTCTCTGATGACTaGAGGTTCTGGACCAGATAT +
Preference number: 2 (lower is better)
Translates to: AALPAPLSRPQERHPSVSRVSDD*RFWTRY
Trigger: ATATCTGGTCCAGAACCTCCAGTCATCAGAGACCCG...AGAGACTGAAGGATGACGCTCCTGAGGCCGTGACAGAGGAGCAGGCAGAGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR CCA 90 bp CTGGTCCAGCTTCACGAACTCTGCTTCTCGCCACGCAGTCTGAAATTGCTGCAGATCAGGCTCCTCTTCTaGTGCAGGTACTGGCCGGCA +
Preference number: 2 (lower is better)
Translates to: LVQLHELCFSPRSLKLLQIRLLF*CRYWPA
Trigger: TGCCGGCCAGTACCTGCACCAGAAGAGGAGCCTGAT...CTGCAGCAATTTCAGACTGCGTGGCGAGAAGCAGAGTTCGTGAAGCTGGACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR TCA 90 bp CTCGCCACGCAGTCTGAAATTGCTGCAGCAGAACTCGGGCCCGGATCTTGGGGAGAAAAGACTTCTGTCTaGGCCCGCTCCAATAGCATT +
Preference number: 2 (lower is better)
Translates to: LATQSEIAAAELGPGSWGEKTSV*ARSNSI
Trigger: AATGCTATTGGAGCGGGCTCAGACAGAAGTCTTTTC...TCCCCAAGATCCGGGCCCGAGTTCTGCTGCAGCAATTTCAGACTGCGTGGCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR GCA 90 bp TTTAATAGATCAATGGTTTCTGCCCCTACAATGGGTACAGGGGCCAGTTCGCCACAGCTGCTCGGCCCGTaGAGCCATCTCCTTGCCGTG +
Preference number: 2 (lower is better)
Translates to: FNRSMVSAPTMGTGASSPQLLGP*SHLLAV
Trigger: CACGGCAAGGAGATGGCTGCACGGGCCGAGCAGCTG...TGGCGAACTGGCCCCTGTACCCATTGTAGGGGCAGAAACCATTGATCTATTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR GCA 90 bp ATAGATCAATGGTTTCTGCCCCTACAATGGGTACAGGGGCCAGTTCGCCAATGGACCTTGGACTGTTGCTaGAGCTCAGGGGCAGCCACG +
Preference number: 2 (lower is better)
Translates to: IDQWFLPLQWVQGPVRQWTLDCC*SSGAAT
Trigger: CGTGGCTGCCCCTGAGCTGCAGCAACAGTCCAAGGT...CCATTGGCGAACTGGCCCCTGTACCCATTGTAGGGGCAGAAACCATTGATCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR GCA 90 bp CTGGCTCTTGCTCAGGGCTTGGTGCAGGACAGTAGAGACCTGCCTTTCAGAATCAGCAACAAGCGACTGTaGAAAGCCTCCCTCCTGTGC +
Preference number: 2 (lower is better)
Translates to: LALAQGLVQDSRDLPFRISNKRL*KASLLC
Trigger: GCACAGGAGGGAGGCTTTGCACAGTCGCTTGTTGCT...GATTCTGAAAGGCAGGTCTCTACTGTCCTGCACCAAGCCCTGAGCAAGAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR GCA 90 bp ATAGATCAATGGTTTCTGCCCCTACAATGGGTACAGGGGCCAGTTCGCCAATGGTGGAGCTCCCGGCTGTaGGACTCCAGGATCTGTGTG +
Preference number: 2 (lower is better)
Translates to: IDQWFLPLQWVQGPVRQWWSSRL*DSRICV
Trigger: CACACAGATCCTGGAGTCGCACAGCCGGGAGCTCCA...CCATTGGCGAACTGGCCCCTGTACCCATTGTAGGGGCAGAAACCATTGATCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR TCA 90 bp GAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTGTGCTGGGGAGGTGGGGCTaGAAGAAGGAGTGTTTATGT +
Preference number: 2 (lower is better)
Translates to: ESGCHHTDHSFCSRGWGVLGRWG*KKECLC
Trigger: ACATAAACACTCCTTCTTTCAGCCCCACCTCCCCAG...CACACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
3UTR-3UTR GCA 90 bp GAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTGTGCCTTCTCTCTTCAGATaGTCCCGCAGGTCTTTCCCT +
Preference number: 2 (lower is better)
Translates to: ESGCHHTDHSFCSRGWGVPSLFR*SRRSFP
Trigger: AGGGAAAGACCTGCGGGAGCATCTGAAGAGAGAAGG...CACACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
3UTR-3UTR GCA 90 bp TTTAATAGATCAATGGTTTCTGCCCCTACAATGGGTACAGGGGCCAGTTCGCCACGTCGCAGCTCTGCCTaGTCCTCTGTCACGGCCTCA +
Preference number: 2 (lower is better)
Translates to: FNRSMVSAPTMGTGASSPRRSSA*SSVTAS
Trigger: TGAGGCCGTGACAGAGGAGCAGGCAGAGCTGCGACG...TGGCGAACTGGCCCCTGTACCCATTGTAGGGGCAGAAACCATTGATCTATTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR CCA 90 bp TTTAATAGATCAATGGTTTCTGCCCCTACAATGGGTACAGGGGCCAGTTCGCCAGGGGCAGCCACGGCCTaGTCCAGCTTCACGAACTCT +
Preference number: 2 (lower is better)
Translates to: FNRSMVSAPTMGTGASSPGAATA*SSFTNS
Trigger: AGAGTTCGTGAAGCTGGACCAGGCCGTGGCTGCCCC...TGGCGAACTGGCCCCTGTACCCATTGTAGGGGCAGAAACCATTGATCTATTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR TCA 90 bp TGCTGCAGCAGAACTCGGGCCCGGATCTTGGGGAGGGCCAAGCTCCTGTCCATCAATCTTTTACTTAGATaGTACCTCTTACTAGCCTGG +
Preference number: 2 (lower is better)
Translates to: CCSRTRARILGRAKLLSINLLLR*YLLLAW
Trigger: CCAGGCTAGTAAGAGGTATCATCTAAGTAAAAGATT...GATGGACAGGAGCTTGGCCCTCCCCAAGATCCGGGCCCGAGTTCTGCTGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR TCA 90 bp AGTCCATGCCCAAGGCCCTCATGGCCTTTTTGGCATTCAAAAAGTTCTTCTTTTCTCCTGGGTCATGGCTaGGTTCTGCAGGCGCCGCAG +
Preference number: 2 (lower is better)
Translates to: SPCPRPSWPFWHSKSSSFLLGHG*VLQAPQ
Trigger: CTGCGGCGCCTGCAGAACTCAGCCATGACCCAGGAG...AAAAGAAGAACTTTTTGAATGCCAAAAAGGCCATGAGGGCCTTGGGCATGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR GCA 90 bp TGCTTATCAGATCTCCTCGCAGTTTGCCATCTAAGGCTTGCCACCAGCTCTGGTTCATCCTTCAGTCTCTaGCTCACGCTCTGGACACCC +
Preference number: 2 (lower is better)
Translates to: CLSDLLAVCHLRLATSSGSSFSL*LTLWTP
Trigger: GGGTGTCCAGAGCGTGAGGCAGAGACTGAAGGATGA...ACCAGAGCTGGTGGCAAGCCTTAGATGGCAAACTGCGAGGAGATCTGATAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR GCA 90 bp CAACTTCCTTTTCCAGAGAATATCATCCTCTCTCTGAGAGGGAGACATGTCTTCCCAGCGTCGCAGCTCTaGCTGCTCCTCTGTCACGGC +
Preference number: 2 (lower is better)
Translates to: QLPFPENIILSLRGRHVFPASQL*LLLCHG
Trigger: GCCGTGACAGAGGAGCAGGCAGAGCTGCGACGCTGG...GAAGACATGTCTCCCTCTCAGAGAGAGGATGATATTCTCTGGAAAAGGAAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR GCA 90 bp AGAAAATCATCCCTTCTCTCTTCAGATGCTCCCGCAGGTCTTTCCCTTGGGCTAAAAGCCTCCCTCCTGTaGCTCCATCCGCTGCACTCT +
Preference number: 2 (lower is better)
Translates to: RKSSLLSSDAPAGLSLGLKASLL*LHPLHS
Trigger: AGAGTGCAGCGGATGGAGGCACAGGAGGGAGGCTTT...TAGCCCAAGGGAAAGACCTGCGGGAGCATCTGAAGAGAGAAGGGATGATTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR TCA 90 bp GAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTGTGGTGTTTATGTCCTTGTaGTATGGAAGAGAGTGGGCC +
Preference number: 2 (lower is better)
Translates to: ESGCHHTDHSFCSRGWGVVFMSL*YGREWA
Trigger: GGCCCACTCTCTTCCATATCACAAGGACATAAACAC...CACACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
3UTR-3UTR TCA 90 bp CTGGCTCTTGCTCAGGGCTTGGTGCAGGACAGTAGAGACCTGCCTTTCAGAATCTTTACTCTTGGACCGTaGCTTTCTCACCTTGGACTG +
Preference number: 2 (lower is better)
Translates to: LALAQGLVQDSRDLPFRIFTLGP*LSHLGL
Trigger: CAGTCCAAGGTGAGAAAGTCACGGTCCAAGAGTAAA...GATTCTGAAAGGCAGGTCTCTACTGTCCTGCACCAAGCCCTGAGCAAGAGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR GCA 90 bp GTGTGGCCAACTTCCTTTTCCAGAGAATATCATCCTCTCTCTGAGAGGGAGACAGTGCTCAGAAGGCCCTaGACACGGGTCTCTGATGAC +
Preference number: 2 (lower is better)
Translates to: VWPTSFSREYHPLSERETVLRRP*TRVSDD
Trigger: GTCATCAGAGACCCGTGTGCAGGGCCTTCTGAGCAC...TGTCTCCCTCTCAGAGAGAGGATGATATTCTCTGGAAAAGGAAGTTGGCCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR GCA 90 bp CAACTTCCTTTTCCAGAGAATATCATCCTCTCTCTGAGAGGGAGACATGTCTTCTCCAGGGTGGCACCGTaGTCCTCCATCAGGCTCCTC +
Preference number: 2 (lower is better)
Translates to: QLPFPENIILSLRGRHVFSRVAP*SSIRLL
Trigger: GAGGAGCCTGATGGAGGAGCACGGTGCCACCCTGGA...GAAGACATGTCTCCCTCTCAGAGAGAGGATGATATTCTCTGGAAAAGGAAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR GCA 90 bp AGAAAATCATCCCTTCTCTCTTCAGATGCTCCCGCAGGTCTTTCCCTTGGGCTACTGGCTGCACAGGGTTaGAAAGGTGTCTGCCTCCAT +
Preference number: 2 (lower is better)
Translates to: RKSSLLSSDAPAGLSLGLLAAQG*KGVCLH
Trigger: ATGGAGGCAGACACCTTTGCAACCCTGTGCAGCCAG...TAGCCCAAGGGAAAGACCTGCGGGAGCATCTGAAGAGAGAAGGGATGATTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR CCA 90 bp AGAAAATCATCCCTTCTCTCTTCAGATGCTCCCGCAGGTCTTTCCCTTGGGCTAGTGTGCAGGCCGACTTaGTCAGCATCTCAGATGCAC +
Preference number: 2 (lower is better)
Translates to: RKSSLLSSDAPAGLSLGLVCRPT*SASQMH
Trigger: GTGCATCTGAGATGCTGACCAAGTCGGCCTGCACAC...TAGCCCAAGGGAAAGACCTGCGGGAGCATCTGAAGAGAGAAGGGATGATTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR CCA 90 bp TTGCAAAGGTGTCTGCCTCCATGTTTTCCAACAAGTCTTCTAGCACGACACTGTTCCTGCTGCACCAGCTaGTCCTCCAGCTTCCTCTCC +
Preference number: 2 (lower is better)
Translates to: LQRCLPPCFPTSLLARHCSCCTS*SSSFLS
Trigger: GGAGAGGAAGCTGGAGGACCAGCTGGTGCAGCAGGA...ACAGTGTCGTGCTAGAAGACTTGTTGGAAAACATGGAGGCAGACACCTTTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR GCA 90 bp CAACTTCCTTTTCCAGAGAATATCATCCTCTCTCTGAGAGGGAGACATGTCTTCAGGCTCCTCTTCTGGTaGAGGTACTGGCCGGCATCC +
Preference number: 2 (lower is better)
Translates to: QLPFPENIILSLRGRHVFRLLFW*RYWPAS
Trigger: GGATGCCGGCCAGTACCTGCACCAGAAGAGGAGCCT...GAAGACATGTCTCCCTCTCAGAGAGAGGATGATATTCTCTGGAAAAGGAAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR GCA 90 bp TGGCTGCACAGGGTTGCAAAGGTGTCTGCCTCCATGTTTTCCAACAAGTCTTCTGTAATGTCTGGCTCTTaGTCAGGGCTTGGTGCAGGA +
Preference number: 2 (lower is better)
Translates to: WLHRVAKVSASMFSNKSSVMSGS*SGLGAG
Trigger: TCCTGCACCAAGCCCTGAGCAAGAGCCAGACATTAC...AGAAGACTTGTTGGAAAACATGGAGGCAGACACCTTTGCAACCCTGTGCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR CAA 90 bp CCTTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATaGCACTGCTCAGTCCGAGGTAACTCATCTATGTTTGGGACAAAC +
Preference number: 2 (lower is better)
Translates to: PWCSRAILRKQRLQR*HCSVRGNSSMFGTN
Trigger: GTTTGTCCCAAACATAGATGAGTTACCTCGGACTGAGCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
3UTR CAA 90 bp TTGTCTTCGATGCACTTCTTCAGAAGCTCTCCCTTGCTTTTACTCTaGGACCGTGACTTTCTCACCTTGGACTGTTGCTGCAGCTCAGGG +
Preference number: 2 (lower is better)
Translates to: LSSMHFFRSSPLLLL*DRDFLTLDCCCSSG
Trigger: CCCTGAGCTGCAGCAACAGTCCAAGGTGAGAAAGTCACGGTCCAAGAGTAAAAGCAAGGGAGAGCTTCTGAAGAAGTGCATCGAAGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR GCA 90 bp GGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGGCGCTACGGGGTCTGTaGCTTCTGCATGTGCAATTT +
Preference number: 2 (lower is better)
Translates to: GGGAERRSVYVLVIWKRVALRGL*LLHVQF
Trigger: AAATTGCACATGCAGAAGGCACAGACCCCGTAGCGC...CACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
3UTR-3UTR GCA 90 bp TATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATTCATGAGACAAGACCCTGCAAGTTGGCATaGGCTACGGGGTCTGTGCCT +
Preference number: 2 (lower is better)
Translates to: YVLVIWKRVGHLEIHETRPCKLA*ATGSVP
Trigger: AGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGG...TCTTGTCTCATGAATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
3UTR-3UTR GCA 90 bp TGCTTATCAGATCTCCTCGCAGTTTGCCATCTAAGGCTTGCCACCAGCTCTGGTTCAGAAGCTCTCCCTTaGTTTTACTCTTGGACCGTG +
Preference number: 2 (lower is better)
Translates to: CLSDLLAVCHLRLATSSGSEALP*FYSWTV
Trigger: CACGGTCCAAGAGTAAAAGCAAGGGAGAGCTTCTGA...ACCAGAGCTGGTGGCAAGCCTTAGATGGCAAACTGCGAGGAGATCTGATAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR CCA 90 bp TGGCTGCACAGGGTTGCAAAGGTGTCTGCCTCCATGTTTTCCAACAAGTCTTCTGTGACTTTCTCACCTTaGACTGTTGCTGCAGCTCAG +
Preference number: 2 (lower is better)
Translates to: WLHRVAKVSASMFSNKSSVTFSP*TVAAAQ
Trigger: CTGAGCTGCAGCAACAGTCCAAGGTGAGAAAGTCAC...AGAAGACTTGTTGGAAAACATGGAGGCAGACACCTTTGCAACCCTGTGCAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR GCA 90 bp GGCCATCTGGAAATTCATGAGACAAGATTAAACCGAGTCCCTGCAAGTTGGCATCCTTCTCTCTTCAGATaGTCCCGCAGGTCTTTCCCT +
Preference number: 2 (lower is better)
Translates to: GHLEIHETRLNRVPASWHPSLFR*SRRSFP
Trigger: AGGGAAAGACCTGCGGGAGCATCTGAAGAGAGAAGG...ATGCCAACTTGCAGGGACTCGGTTTAATCTTGTCTCATGAATTTCCAGATGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
3UTR-3UTR GCA 90 bp CTGGCTCTTGCTCAGGGCTTGGTGCAGGACAGTAGAGACCTGCCTTTCAGAATCGAATTTTGTCTTCGATaGACTTCTTCAGAAGCTCTC +
Preference number: 2 (lower is better)
Translates to: LALAQGLVQDSRDLPFRIEFCLR*TSSEAL
Trigger: GAGAGCTTCTGAAGAAGTGCATCGAAGACAAAATTC...GATTCTGAAAGGCAGGTCTCTACTGTCCTGCACCAAGCCCTGAGCAAGAGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR GCA 90 bp ATAGATCAATGGTTTCTGCCCCTACAATGGGTACAGGGGCCAGTTCGCCAATGGGGTTGCAAAGGTGTCTaGCTCCATGTTTTCCAACAA +
Preference number: 2 (lower is better)
Translates to: IDQWFLPLQWVQGPVRQWGCKGV*LHVFQQ
Trigger: TTGTTGGAAAACATGGAGGCAGACACCTTTGCAACC...CCATTGGCGAACTGGCCCCTGTACCCATTGTAGGGGCAGAAACCATTGATCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR CCA 90 bp CTTGCTCAGGGCTTGGTGCAGGACAGTAGAGACCTGCCTTTCAGAATCCACCTCCATTTTAGCTGCCTCTaGTTTCAATTCCCCTTTGAA +
Preference number: 2 (lower is better)
Translates to: LAQGLVQDSRDLPFRIHLHFSCL*FQFPFE
Trigger: TTCAAAGGGGAATTGAAACCAGAGGCAGCTAAAATG...GAGGTGGATTCTGAAAGGCAGGTCTCTACTGTCCTGCACCAAGCCCTGAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR TCA 90 bp CAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCACTGGGGAGGTGGGGCTaGAAGAAGGAGTGTTTATGT +
Preference number: 2 (lower is better)
Translates to: QNIRVENLAVTTQTIASALGRWG*KKECLC
Trigger: ACATAAACACTCCTTCTTTCAGCCCCACCTCCCCAG...TGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
3UTR-3UTR GCA 90 bp TATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATTCATGAGACAAGAGCGCTACGGGGTCTGTaGCTTCTGCATGTGCAATTT +
Preference number: 2 (lower is better)
Translates to: YVLVIWKRVGHLEIHETRALRGL*LLHVQF
Trigger: AAATTGCACATGCAGAAGGCACAGACCCCGTAGCGC...TCTTGTCTCATGAATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
3UTR-3UTR GCA 90 bp GGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGGGGGTCTGTGCCTTCTaGATGTGCAATTTATATTTG +
Preference number: 2 (lower is better)
Translates to: GGGAERRSVYVLVIWKRVGVCAF*MCNLYL
Trigger: CAAATATAAATTGCACATGCAGAAGGCACAGACCCC...CACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
3UTR-3UTR TCA 90 bp CAACTTCCTTTTCCAGAGAATATCATCCTCTCTCTGAGAGGGAGACATGTCTTCTGTTCCTCACAGAGGTaGATTTTGTCTTCGATGCAC +
Preference number: 2 (lower is better)
Translates to: QLPFPENIILSLRGRHVFCSSQR*ILSSMH
Trigger: GTGCATCGAAGACAAAATTCACCTCTGTGAGGAACA...GAAGACATGTCTCCCTCTCAGAGAGAGGATGATATTCTCTGGAAAAGGAAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR CCA 90 bp CAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCATATGTCCTTGTGATATaGAAGAGAGTGGGCCATCTG +
Preference number: 2 (lower is better)
Translates to: QNIRVENLAVTTQTIASAYVLVI*KRVGHL
Trigger: CAGATGGCCCACTCTCTTCCATATCACAAGGACATA...TGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
3UTR-3UTR CCA 90 bp TGGCTGCACAGGGTTGCAAAGGTGTCTGCCTCCATGTTTTCCAACAAGTCTTCTACCAGATATTCCCTGTaGCCAAATCTTTTACTTAGA +
Preference number: 2 (lower is better)
Translates to: WLHRVAKVSASMFSNKSSTRYSL*PNLLLR
Trigger: TCTAAGTAAAAGATTTGGCCACAGGGAATATCTGGT...AGAAGACTTGTTGGAAAACATGGAGGCAGACACCTTTGCAACCCTGTGCAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR CCA 90 bp TTGCAAAGGTGTCTGCCTCCATGTTTTCCAACAAGTCTTCTAGCACGACACTGTAATAGCATTTCCATTTaGTCTTCATCCAGGTACCCT +
Preference number: 2 (lower is better)
Translates to: LQRCLPPCFPTSLLARHCNSISI*SSSRYP
Trigger: AGGGTACCTGGATGAAGACCAAATGGAAATGCTATT...ACAGTGTCGTGCTAGAAGACTTGTTGGAAAACATGGAGGCAGACACCTTTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR GCA 90 bp GGCCATCTGGAAATTCATGAGACAAGATTAAACCGAGTCCCTGCAAGTTGGCATTGTGCCTTCTGCATGTaGAATTTATATTTGCGAGTT +
Preference number: 2 (lower is better)
Translates to: GHLEIHETRLNRVPASWHCAFCM*NLYLRV
Trigger: AACTCGCAAATATAAATTGCACATGCAGAAGGCACA...ATGCCAACTTGCAGGGACTCGGTTTAATCTTGTCTCATGAATTTCCAGATGGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
3UTR-3UTR CCA 90 bp CCAACTTCCTTTTCCAGAGAATATCATCCTCTCTCTGAGAGGGAGACATGTCTTTACCTCTTACTAGCCTaGAAAAAGTCCATTAACTCT +
Preference number: 2 (lower is better)
Translates to: PTSFSREYHPLSERETCLYLLLA*KKSINS
Trigger: AGAGTTAATGGACTTTTTCCAGGCTAGTAAGAGGTA...AAGACATGTCTCCCTCTCAGAGAGAGGATGATATTCTCTGGAAAAGGAAGTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR GCA 90 bp GTAACAAATACAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATTGTGCCTTCTGCATGTaGAATTTATATTTGCGAGTT +
Preference number: 2 (lower is better)
Translates to: VTNTKHKSRESGCHHTDHCAFCM*NLYLRV
Trigger: AACTCGCAAATATAAATTGCACATGCAGAAGGCACA...ATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTGTATTTGTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
3UTR GCA 72 bp CTGCTGCCAGCTCGCCAGGGCCTGCTGCTGCTGGGCTaGCTCCTGCTGCACCAGCTGGTCCTCCAGCTTCCT +
Preference number: 3 (lower is better)
Translates to: LLPARQGLLLLG*LLLHQLVLQLP
Trigger: AGGAAGCTGGAGGACCAGCTGGTGCAGCAGGAGGCAGCCCAGCAGCAGCAGGCCCTGGCGAGCTGGCAGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR GCA 72 bp CAGCTCTGGTGTTTCCTCCGCCTGCCCACGTCGGCCTaGTCCGCTCCGCCATCGCTCTCAGCTGCGTGGTCC +
Preference number: 3 (lower is better)
Translates to: QLWCFLRLPTSA*SAPPSLSAAWS
Trigger: GGACCACGCAGCTGAGAGCGATGGCGGAGCGGAGCAGGCCGACGTGGGCAGGCGGAGGAAACACCAGAGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR CCA 72 bp CTGTGGGCAGTACCACACTCAGGAGCCGGCGAAGCGTaGCCCCGGGCACCATGGCCATCCTCGCCAGGTACG +
Preference number: 3 (lower is better)
Translates to: LWAVPHSGAGEA*PRAPWPSSPGT
Trigger: CGTACCTGGCGAGGATGGCCATGGTGCCCGGGGCCACGCTTCGCCGGCTCCTGAGTGTGGTACTGCCCACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR CCA 72 bp CACTCAGGAGCCGGCGAAGCGTGGCCCCGGGCACCATaGCCATCCTCGCCAGGTACGATGCCAGTCTCAGCT +
Preference number: 3 (lower is better)
Translates to: HSGAGEAWPRAP*PSSPGTMPVSA
Trigger: AGCTGAGACTGGCATCGTACCTGGCGAGGATGGCCATGGTGCCCGGGGCCACGCTTCGCCGGCTCCTGAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR GCA 72 bp GGCCCCGGGCACCATGGCCATCCTCGCCAGGTACGATaGCAGTCTCAGCTCCTGGCTGCACAGGGTTGCAAA +
Preference number: 3 (lower is better)
Translates to: GPGHHGHPRQVR*QSQLLAAQGCK
Trigger: TTTGCAACCCTGTGCAGCCAGGAGCTGAGACTGGCATCGTACCTGGCGAGGATGGCCATGGTGCCCGGGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR CCA 72 bp TGCTCCTCCATCAGGCTCCTCTTCTGGTGCAGGTACTaGCCGGCATCCTCAACCGTTCGGAAGGCCTCGCCG +
Preference number: 3 (lower is better)
Translates to: CSSIRLLFWCRY*PASSTVRKASP
Trigger: CGGCGAGGCCTTCCGAACGGTTGAGGATGCCGGCCAGTACCTGCACCAGAAGAGGAGCCTGATGGAGGAGCA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR CCA 72 bp CATCGCTCTCAGCTGCGTGGTCCACATGTCTCTCGGTaGCCGAATCCAGCAGGGCCAGCAGCTGAGGCTGTG +
Preference number: 3 (lower is better)
Translates to: HRSQLRGPHVSR*PNPAGPAAEAV
Trigger: CACAGCCTCAGCTGCTGGCCCTGCTGGATTCGGCCACCGAGAGACATGTGGACCACGCAGCTGAGAGCGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR TCA 72 bp CGGTGGCCTTTTCAAACAGCGAAAGGGTCAGGGTCCTaGGATCGTCCAGGGCGGCCTGGTCCAGACGCTCCT +
Preference number: 3 (lower is better)
Translates to: RWPFQTAKGSGS*DRPGRPGPDAP
Trigger: AGGAGCGTCTGGACCAGGCCGCCCTGGACGATCTCAGGACCCTGACCCTTTCGCTGTTTGAAAAGGCCACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR TCA 72 bp GCCCGGATCTTGGGGAGGGCCAAGCTCCTGTCCATCTaGGCAAAGCAGCCATGGACCTCCTGCCTCATCCTG +
Preference number: 3 (lower is better)
Translates to: ARILGRAKLLSI*AKQPWTSCLIL
Trigger: CAGGATGAGGCAGGAGGTCCATGGCTGCTTTGCTCAGATGGACAGGAGCTTGGCCCTCCCCAAGATCCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR GCA 72 bp TCCTCAACCGTTCGGAAGGCCTCGCCGACGGACGCCTaGTCCCTACGCTGCTCCCTGTGCTTTTGTAGCAAC +
Preference number: 3 (lower is better)
Translates to: SSTVRKASPTDA*SLRCSLCFCSN
Trigger: GTTGCTACAAAAGCACAGGGAGCAGCGTAGGGAGCAGGCGTCCGTCGGCGAGGCCTTCCGAACGGTTGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR GCA 72 bp GTGGCACCGTGCTCCTCCATCAGGCTCCTCTTCTGGTaGAGGTACTGGCCGGCATCCTCAACCGTTCGGAAG +
Preference number: 3 (lower is better)
Translates to: VAPCSSIRLLFW*RYWPASSTVRK
Trigger: CTTCCGAACGGTTGAGGATGCCGGCCAGTACCTGCACCAGAAGAGGAGCCTGATGGAGGAGCACGGTGCCAC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR GCA 72 bp TCTCTCGTGCTTCTGAATGAGGTGAGTCAGCTGGGCTaGAGCGGTGCTCAGAAGGCCCTGCACACGGGTCTC +
Preference number: 3 (lower is better)
Translates to: SLVLLNEVSQLG*SGAQKALHTGL
Trigger: GAGACCCGTGTGCAGGGCCTTCTGAGCACCGCTGCAGCCCAGCTGACTCACCTCATTCAGAAGCACGAGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR GCA 72 bp ATGAAGATCAGGTGCTCCCAGCGTCGCAGCTCTGCCTaGTCCTCTGTCACGGCCTCAGGAGCGTCATCCTTC +
Preference number: 3 (lower is better)
Translates to: MKIRCSQRRSSA*SSVTASGASSF
Trigger: GAAGGATGACGCTCCTGAGGCCGTGACAGAGGAGCAGGCAGAGCTGCGACGCTGGGAGCACCTGATCTTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR GCA 72 bp CTTCATGAAGATCAGGTGCTCCCAGCGTCGCAGCTCTaGCTGCTCCTCTGTCACGGCCTCAGGAGCGTCATC +
Preference number: 3 (lower is better)
Translates to: LHEDQVLPASQL*LLLCHGLRSVI
Trigger: GATGACGCTCCTGAGGCCGTGACAGAGGAGCAGGCAGAGCTGCGACGCTGGGAGCACCTGATCTTCATGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR GCA 72 bp AGGGGCAGCCACGGCCTGGTCCAGCTTCACGAACTCTaGTTCTCGCCACGCAGTCTGAAATTGCTGCAGCAG +
Preference number: 3 (lower is better)
Translates to: RGSHGLVQLHEL*FSPRSLKLLQQ
Trigger: CTGCTGCAGCAATTTCAGACTGCGTGGCGAGAAGCAGAGTTCGTGAAGCTGGACCAGGCCGTGGCTGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR GCA 72 bp GGACGCCTTCTGGAACTGCAGAGCAACAAGCGACTGTaGAAAGCCTCCCTCCTGTGCCTCCATCCGCTGCAC +
Preference number: 3 (lower is better)
Translates to: GRLLELQSNKRL*KASLLCLHPLH
Trigger: GTGCAGCGGATGGAGGCACAGGAGGGAGGCTTTGCACAGTCGCTTGTTGCTCTGCAGTTCCAGAAGGCGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR GCA 72 bp CCTGGAGCTCCCGGCTGTGCGACTCCAGGATCTGTGTaGAGGCCGACTTGGTCAGCATCTCAGATGCACTCA +
Preference number: 3 (lower is better)
Translates to: PGAPGCATPGSV*RPTWSASQMHS
Trigger: TGAGTGCATCTGAGATGCTGACCAAGTCGGCCTGCACACAGATCCTGGAGTCGCACAGCCGGGAGCTCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR CAA 90 bp CGACTTGGTCAGCATCTCAGATGCACTCAGCTCTTCCAGGAGCAAGTCCTGGATACTCGGGCCCGGATCTaGGGGAGGGCCAAGCTCCTG +
Preference number: 3 (lower is better)
Translates to: RLGQHLRCTQLFQEQVLDTRARI*GRAKLL
Trigger: CAGGAGCTTGGCCCTCCCCAAGATCCGGGCCCGAGT...ATCCAGGACTTGCTCCTGGAAGAGCTGAGTGCATCTGAGATGCTGACCAAGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR GCA 72 bp CAGAGCAACAAGCGACTGTGCAAAGCCTCCCTCCTGTaGCTCCATCCGCTGCACTCTCTCCCGCAGCAATTC +
Preference number: 3 (lower is better)
Translates to: QSNKRLCKASLL*LHPLHSLPQQF
Trigger: GAATTGCTGCGGGAGAGAGTGCAGCGGATGGAGGCACAGGAGGGAGGCTTTGCACAGTCGCTTGTTGCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR CCA 72 bp TCTGAAATTGCTGCAGCAGAACTCGGGCCCGGATCTTaGGGAGGGCCAAGCTCCTGTCCATCTGAGCAAAGC +
Preference number: 3 (lower is better)
Translates to: SEIAAAELGPGS*GGPSSCPSEQS
Trigger: GCTTTGCTCAGATGGACAGGAGCTTGGCCCTCCCCAAGATCCGGGCCCGAGTTCTGCTGCAGCAATTTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR CAA 90 bp GCTCCTCCAAGTCATCCTCGTCATGAGGGCCATGACATTGTGTCAGCGCAGTGTCAGAGGCTCCAACGATaGCACTGCTCAGTCCGAGGT +
Preference number: 3 (lower is better)
Translates to: APPSHPRHEGHDIVSAQCQRLQR*HCSVRG
Trigger: ACCTCGGACTGAGCAGTGCAATCGTTGGAGCCTCTG...ACACTGCGCTGACACAATGTCATGGCCCTCATGACGAGGATGACTTGGAGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
3UTR TCA 72 bp CTTCATCCAGGTACCCTGCTCTCTCGTGCTTCTGAATaGGGTGAGTCAGCTGGGCTGCAGCGGTGCTCAGAA +
Preference number: 3 (lower is better)
Translates to: LHPGTLLSRASE*GESAGLQRCSE
Trigger: TTCTGAGCACCGCTGCAGCCCAGCTGACTCACCTCATTCAGAAGCACGAGAGAGCAGGGTACCTGGATGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR TCA 72 bp TCCAGCTTCACGAACTCTGCTTCTCGCCACGCAGTCTaGAATTGCTGCAGCAGAACTCGGGCCCGGATCTTG +
Preference number: 3 (lower is better)
Translates to: SSFTNSASRHAV*NCCSRTRARIL
Trigger: CAAGATCCGGGCCCGAGTTCTGCTGCAGCAATTTCAGACTGCGTGGCGAGAAGCAGAGTTCGTGAAGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR GCA 72 bp CTTATCAGATCTCCTCGCAGTTTGCCATCTAAGGCTTaGCACCAGCTCTGGTGTTTCCTCCGCCTGCCCACG +
Preference number: 3 (lower is better)
Translates to: LIRSPRSLPSKA*HQLWCFLRLPT
Trigger: CGTGGGCAGGCGGAGGAAACACCAGAGCTGGTGGCAAGCCTTAGATGGCAAACTGCGAGGAGATCTGATAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR CCA 72 bp CCTTCTCTCTTCAGATGCTCCCGCAGGTCTTTCCCTTaGGCTAGTCCATGCCCAAGGCCCTCATGGCCTTTT +
Preference number: 3 (lower is better)
Translates to: PSLFRCSRRSFP*ASPCPRPSWPF
Trigger: AAAAGGCCATGAGGGCCTTGGGCATGGACTAGCCCAAGGGAAAGACCTGCGGGAGCATCTGAAGAGAGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR GCA 72 bp CTCTTGCTCAGGGCTTGGTGCAGGACAGTAGAGACCTaGCTTTCAGAATCCACCTCCCCAGGTTCGTTCAGA +
Preference number: 3 (lower is better)
Translates to: LLLRAWCRTVET*LSESTSPGSFR
Trigger: TCTGAACGAACCTGGGGAGGTGGATTCTGAAAGGCAGGTCTCTACTGTCCTGCACCAAGCCCTGAGCAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR CCA 72 bp GTGCTCAGAAGGCCCTGCACACGGGTCTCTGATGACTaGAGGTTCTGGACCAGATATTCCCTGTGGCCAAAT +
Preference number: 3 (lower is better)
Translates to: VLRRPCTRVSDD*RFWTRYSLWPN
Trigger: ATTTGGCCACAGGGAATATCTGGTCCAGAACCTCCAGTCATCAGAGACCCGTGTGCAGGGCCTTCTGAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR CAA 90 bp GGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGCCGAGTCCCTGCAAGTaGGCATGCGCTACGGGGTCT +
Preference number: 3 (lower is better)
Translates to: GGGAERRSVYVLVIWKRVPSPCK*ACATGS
Trigger: AGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGG...CACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
3UTR-3UTR CAA 90 bp ATAGATCAATGGTTTCTGCCCCTACAATGGGTACAGGGGCCAGTTCGCCAATGGCCACGCAGTCTGAAATaGCTGCAGCAGAACTCGGGC +
Preference number: 3 (lower is better)
Translates to: IDQWFLPLQWVQGPVRQWPRSLK*LQQNSG
Trigger: GCCCGAGTTCTGCTGCAGCAATTTCAGACTGCGTGG...CCATTGGCGAACTGGCCCCTGTACCCATTGTAGGGGCAGAAACCATTGATCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR CAA 90 bp GTAGGCCGACAGAGTCTCGGTCACCCGGGACGCCTTCTGGAACTGCAGAGCAACTTGTCCAACTTCTGCTaGATTGAAAAGACTTCTGTC +
Preference number: 3 (lower is better)
Translates to: VGRQSLGHPGRLLELQSNLSNFC*IEKTSV
Trigger: GACAGAAGTCTTTTCAATCAAGCAGAAGTTGGACAA...GTTGCTCTGCAGTTCCAGAAGGCGTCCCGGGTGACCGAGACTCTGTCGGCCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR TCA 72 bp AATGGGTACAGGGGCCAGTTCGCCAATGGGCTCCAGTaGCAGGTGTGGCCAACTTCCTTTTCCAGAGAATAT +
Preference number: 3 (lower is better)
Translates to: NGYRGQFANGLQ*QVWPTSFSREY
Trigger: ATATTCTCTGGAAAAGGAAGTTGGCCACACCTGTCACTGGAGCCCATTGGCGAACTGGCCCCTGTACCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR CAA 90 bp GGTGAATTTTGTCTTCGATGCACTTCTTCAGAAGCTCTCCCTTGCTTTTACTCTCAGGGCACCCCACGCTaGAGCAGCTCCTGGGTCATG +
Preference number: 3 (lower is better)
Translates to: GEFCLRCTSSEALPCFYSQGTPR*SSSWVM
Trigger: CATGACCCAGGAGCTGCTCAAGCGTGGGGTGCCCTG...AGAGTAAAAGCAAGGGAGAGCTTCTGAAGAAGTGCATCGAAGACAAAATTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR TCA 72 bp CTTCAGAAGCTCTCCCTTGCTTTTACTCTTGGACCGTaGCTTTCTCACCTTGGACTGTTGCTGCAGCTCAGG +
Preference number: 3 (lower is better)
Translates to: LQKLSLAFTLGP*LSHLGLLLQLR
Trigger: CCTGAGCTGCAGCAACAGTCCAAGGTGAGAAAGTCACGGTCCAAGAGTAAAAGCAAGGGAGAGCTTCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR GCA 72 bp CGAGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTaGCTTCTGCATGTGCAATTTATATTTGCGAGTTGT +
Preference number: 3 (lower is better)
Translates to: RVPASWHALRGL*LLHVQFIFASC
Trigger: ACAACTCGCAAATATAAATTGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
3UTR CCA 72 bp ATTCATGAGACAAGATTAAACCGAGTCCCTGCAAGTTaGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTG +
Preference number: 3 (lower is better)
Translates to: IHETRLNRVPAS*HALRGLCLLHV
Trigger: CACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGGTTTAATCTTGTCTCATGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
3UTR CCA 72 bp CTGTGTTTAATAGATCAATGGTTTCTGCCCCTACAATaGGTACAGGGGCCAGTTCGCCAATGGGCTCCAGTG +
Preference number: 3 (lower is better)
Translates to: LCLIDQWFLPLQ*VQGPVRQWAPV
Trigger: CACTGGAGCCCATTGGCGAACTGGCCCCTGTACCCATTGTAGGGGCAGAAACCATTGATCTATTAAACACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR CAA 90 bp CACCAGGTCTTCAGAGGCCTGTTCCTCACAGAGGTGAATTTTGTCTTCGATGCACCCTTGCTTTTACTCTaGGACCGTGACTTTCTCACC +
Preference number: 3 (lower is better)
Translates to: HQVFRGLFLTEVNFVFDAPLLLL*DRDFLT
Trigger: GGTGAGAAAGTCACGGTCCAAGAGTAAAAGCAAGGG...TGCATCGAAGACAAAATTCACCTCTGTGAGGAACAGGCCTCTGAAGACCTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR GCA 72 bp CCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTaGACTGCTCAGTCCGAGGTAACTCATCTATGTTTG +
Preference number: 3 (lower is better)
Translates to: PGPYYANRGSND*TAQSEVTHLCL
Trigger: CAAACATAGATGAGTTACCTCGGACTGAGCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
3UTR TCA 72 bp TCCACCAGGTCTTCAGAGGCCTGTTCCTCACAGAGGTaGATTTTGTCTTCGATGCACTTCTTCAGAAGCTCT +
Preference number: 3 (lower is better)
Translates to: STRSSEACSSQR*ILSSMHFFRSS
Trigger: AGAGCTTCTGAAGAAGTGCATCGAAGACAAAATTCACCTCTGTGAGGAACAGGCCTCTGAAGACCTGGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR GCA 72 bp GCCATATTACGCAAACAGAGGCTCCAACGATTGCACTaGTCAGTCCGAGGTAACTCATCTATGTTTGGGACA +
Preference number: 3 (lower is better)
Translates to: AILRKQRLQRLH*SVRGNSSMFGT
Trigger: TGTCCCAAACATAGATGAGTTACCTCGGACTGAGCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
3UTR GCA 72 bp TTTCTAATCCTCTGCTTATCAGATCTCCTCGCAGTTTaGCATCTAAGGCTTGCCACCAGCTCTGGTGTTTCC +
Preference number: 3 (lower is better)
Translates to: FLILCLSDLLAV*HLRLATSSGVS
Trigger: GGAAACACCAGAGCTGGTGGCAAGCCTTAGATGGCAAACTGCGAGGAGATCTGATAAGCAGAGGATTAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR GCA 72 bp TTCTCTTGCGGGCCCACAGCATCTTTTCTAATCCTCTaGTTATCAGATCTCCTCGCAGTTTGCCATCTAAGG +
Preference number: 3 (lower is better)
Translates to: FSCGPTASFLIL*LSDLLAVCHLR
Trigger: CCTTAGATGGCAAACTGCGAGGAGATCTGATAAGCAGAGGATTAGAAAAGATGCTGTGGGCCCGCAAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR TCA 72 bp GAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTaGTATGGAAGAGAGTGGGCCATCTGGAAATTCATG +
Preference number: 3 (lower is better)
Translates to: EVGLKEGVFMSL*YGREWAIWKFM
Trigger: CATGAATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
3UTR GCA 72 bp CTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTaGATGTGCAATTTATATTTGCGAGTTGTGCATTAT +
Preference number: 3 (lower is better)
Translates to: LQVGMRYGVCAF*MCNLYLRVVHY
Trigger: ATAATGCACAACTCGCAAATATAAATTGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
3UTR-3UTR CAA 90 bp AGTCCATGCCCAAGGCCCTCATGGCCTTTTTGGCATTCAAAAAGTTCTTCTTTTCACGACACTGTTCTGTaGTTCCTCTCTCAAACACTG +
Preference number: 3 (lower is better)
Translates to: SPCPRPSWPFWHSKSSSFHDTVL*FLSQTL
Trigger: CAGTGTTTGAGAGAGGAACAACAGAACAGTGTCGTG...AAAAGAAGAACTTTTTGAATGCCAAAAAGGCCATGAGGGCCTTGGGCATGGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR GCA 72 bp TTTTGTCTTCGATGCACTTCTTCAGAAGCTCTCCCTTaGTTTTACTCTTGGACCGTGACTTTCTCACCTTGG +
Preference number: 3 (lower is better)
Translates to: FCLRCTSSEALP*FYSWTVTFSPW
Trigger: CCAAGGTGAGAAAGTCACGGTCCAAGAGTAAAAGCAAGGGAGAGCTTCTGAAGAAGTGCATCGAAGACAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR GCA 72 bp AGGCCTGTTCCTCACAGAGGTGAATTTTGTCTTCGATaGACTTCTTCAGAAGCTCTCCCTTGCTTTTACTCT +
Preference number: 3 (lower is better)
Translates to: RPVPHRGEFCLR*TSSEALPCFYS
Trigger: AGAGTAAAAGCAAGGGAGAGCTTCTGAAGAAGTGCATCGAAGACAAAATTCACCTCTGTGAGGAACAGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR CCA 72 bp GGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATaGAAGAGAGTGGGCCATCTGGAAATTCATGAGACA +
Preference number: 3 (lower is better)
Translates to: GAERRSVYVLVI*KRVGHLEIHET
Trigger: TGTCTCATGAATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
3UTR TCA 72 bp TTGTCCAACTTCTGCTTGATTGAAAAGACTTCTGTCTaGGCCCGCTCCAATAGCATTTCCATTTGGTCTTCA +
Preference number: 3 (lower is better)
Translates to: LSNFCLIEKTSV*ARSNSISIWSS
Trigger: TGAAGACCAAATGGAAATGCTATTGGAGCGGGCTCAGACAGAAGTCTTTTCAATCAAGCAGAAGTTGGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR TCA 72 bp GCCAACTTCCTTTTCCAGAGAATATCATCCTCTCTCTaGGAGGGAGACATGTCTTCTTTAATATGCTCTGCT +
Preference number: 3 (lower is better)
Translates to: ANFLFQRISSSL*EGDMSSLICSA
Trigger: AGCAGAGCATATTAAAGAAGACATGTCTCCCTCTCAGAGAGAGGATGATATTCTCTGGAAAAGGAAGTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR-3UTR CAA 90 bp AGTCCATGCCCAAGGCCCTCATGGCCTTTTTGGCATTCAAAAAGTTCTTCTTTTTCCTGCTTTAAGTCATaGTCCAACTTCTGCTTGATT +
Preference number: 3 (lower is better)
Translates to: SPCPRPSWPFWHSKSSSFSCFKS*SNFCLI
Trigger: AATCAAGCAGAAGTTGGACAATGACTTAAAGCAGGA...AAAAGAAGAACTTTTTGAATGCCAAAAAGGCCATGAGGGCCTTGGGCATGGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR TCA 72 bp TCTTTTCCTGCTTTAAGTCATTGTCCAACTTCTGCTTaGTTGAAAAGACTTCTGTCTGAGCCCGCTCCAATA +
Preference number: 3 (lower is better)
Translates to: SFPALSHCPTSA*LKRLLSEPAPI
Trigger: TATTGGAGCGGGCTCAGACAGAAGTCTTTTCAATCAAGCAGAAGTTGGACAATGACTTAAAGCAGGAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp ACTGGCCGGCATCCTCAACCGTTCGGAAGGCCTCGCCGACGGACGCCTGCTCCCGCTGGGCTGCAGCGGTaGTCAGAAGGCCCTGCACAC +
Preference number: 4 (lower is better)
Translates to: TGRHPQPFGRPRRRTPAPAGLQR*SEGPAH
Trigger: GTGTGCAGGGCCTTCTGAGCACCGCTGCAGCCCAGC...GGGAGCAGGCGTCCGTCGGCGAGGCCTTCCGAACGGTTGAGGATGCCGGCCAGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR TCA 90 bp AGGTACTGGCCGGCATCCTCAACCGTTCGGAAGGCCTCGCCGACGGACGCCTGCGTTGGGCAGGAAGCTTaGGGCTCTCCCCGTTCCCGA +
Preference number: 4 (lower is better)
Translates to: RYWPASSTVRKASPTDACVGQEA*GSPRSR
Trigger: TCGGGAACGGGGAGAGCCTCAAGCTTCCTGCCCAAC...GCAGGCGTCCGTCGGCGAGGCCTTCCGAACGGTTGAGGATGCCGGCCAGTACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR TCA 90 bp GCTGTGAGGCTGTGGGCAGTACCACACTCAGGAGCCGGCGAAGCGTGGCCCCGGGGGAGGAACGTGCAGTaGGATCTCTGGCTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: AVRLWAVPHSGAGEAWPRGRNVQ*DLWLLW
Trigger: CCAAAGGAGCCAGAGATCTCACTGCACGTTCCTCCC...CCGGGGCCACGCTTCGCCGGCTCCTGAGTGTGGTACTGCCCACAGCCTCACAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp TGGCCCCGGGCACCATGGCCATCCTCGCCAGGTACGATGCCAGTCTCAGCTCCTTCCAGGGTGGCACCGTaGTCCTCCATCAGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: WPRAPWPSSPGTMPVSAPSRVAP*SSIRLL
Trigger: GAGGAGCCTGATGGAGGAGCACGGTGCCACCCTGGA...AGGAGCTGAGACTGGCATCGTACCTGGCGAGGATGGCCATGGTGCCCGGGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp ACTGGCCGGCATCCTCAACCGTTCGGAAGGCCTCGCCGACGGACGCCTGCTCCCAAAGCCTCCCTCCTGTaGCTCCATCCGCTGCACTCT +
Preference number: 4 (lower is better)
Translates to: TGRHPQPFGRPRRRTPAPKASLL*LHPLHS
Trigger: AGAGTGCAGCGGATGGAGGCACAGGAGGGAGGCTTT...GGGAGCAGGCGTCCGTCGGCGAGGCCTTCCGAACGGTTGAGGATGCCGGCCAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp GCAGCTCTGCCTGCTCCTCTGTCACGGCCTCAGGAGCGTCATCCTTCAGTCTCTCAGCTCGCCAGGGCCTaGTGCTGCTGGGCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: AALPAPLSRPQERHPSVSQLARA*CCWAAS
Trigger: GGAGGCAGCCCAGCAGCAGCAGGCCCTGGCGAGCTG...AGAGACTGAAGGATGACGCTCCTGAGGCCGTGACAGAGGAGCAGGCAGAGCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp TGCTGCAGCAGAACTCGGGCCCGGATCTTGGGGAGGGCCAAGCTCCTGTCCATCGTCCAAGCCGGCAGCTaGCACACCCCGAGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: CCSRTRARILGRAKLLSIVQAGS*HTPRKV
Trigger: GACCTTCCTCGGGGTGTGGCAGCTGCCGGCTTGGAC...GATGGACAGGAGCTTGGCCCTCCCCAAGATCCGGGCCCGAGTTCTGCTGCAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR TCA 90 bp GCTGTGAGGCTGTGGGCAGTACCACACTCAGGAGCCGGCGAAGCGTGGCCCCGGTTCCGTGACGAGCTCTaGAAGGTGAGTTGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: AVRLWAVPHSGAGEAWPRFRDEL*KVSWAG
Trigger: TCCTGCCCAACTCACCTTTCAGAGCTCGTCACGGAA...CCGGGGCCACGCTTCGCCGGCTCCTGAGTGTGGTACTGCCCACAGCCTCACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp CTCCTCTTCTGGTGCAGGTACTGGCCGGCATCCTCAACCGTTCGGAAGGCCTCGCCAGCGTCGCAGCTCTaGCTGCTCCTCTGTCACGGC +
Preference number: 4 (lower is better)
Translates to: LLFWCRYWPASSTVRKASPASQL*LLLCHG
Trigger: GCCGTGACAGAGGAGCAGGCAGAGCTGCGACGCTGG...CGAGGCCTTCCGAACGGTTGAGGATGCCGGCCAGTACCTGCACCAGAAGAGGAG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp ATGAGGGCCATGACATTGTGTCAGCGCAGTGTGCCCACAGCTGGGCTCATAGGACCCACTGCCCGAGCCTaGTGTGGGTCAGCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: MRAMTLCQRSVPTAGLIGPTARA*CGSALG
Trigger: GCCCAGGGCTGACCCACAGCAGGCTCGGGCAGTGGG...TCCTATGAGCCCAGCTGTGGGCACACTGCGCTGACACAATGTCATGGCCCTCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp CTCTTCAGATGCTCCCGCAGGTCTTTCCCTTGGGCTAGTCCATGCCCAAGGCCCCAGCTGCTCGGCCCGTaGAGCCATCTCCTTGCCGTG +
Preference number: 4 (lower is better)
Translates to: LFRCSRRSFPWASPCPRPQLLGP*SHLLAV
Trigger: CACGGCAAGGAGATGGCTGCACGGGCCGAGCAGCTG...GGGCCTTGGGCATGGACTAGCCCAAGGGAAAGACCTGCGGGAGCATCTGAAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp GCAGCTCTGCCTGCTCCTCTGTCACGGCCTCAGGAGCGTCATCCTTCAGTCTCTTGGGCTGCCTCCTGCTaGACCAGCTGGTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: AALPAPLSRPQERHPSVSWAASC*TSWSSS
Trigger: GCTGGAGGACCAGCTGGTGCAGCAGGAGGCAGCCCA...AGAGACTGAAGGATGACGCTCCTGAGGCCGTGACAGAGGAGCAGGCAGAGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CCA 90 bp CCGTGCTCCTCCATCAGGCTCCTCTTCTGGTGCAGGTACTGGCCGGCATCCTCAGCTTGCCACCAGCTCTaGTGTTTCCTCCGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: PCSSIRLLFWCRYWPASSACHQL*CFLRLP
Trigger: GGGCAGGCGGAGGAAACACCAGAGCTGGTGGCAAGC...TGAGGATGCCGGCCAGTACCTGCACCAGAAGAGGAGCCTGATGGAGGAGCACGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR TCA 90 bp CCGAGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCAGTCCTGGGTGACAGCTaGCACCTGTTGACGGGGGAG +
Preference number: 4 (lower is better)
Translates to: PSPCKLACATGSVPSACAVLGDS*HLLTGE
Trigger: CTCCCCCGTCAACAGGTGTCAGCTGTCACCCAGGAC...TGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310917.6
CDS-3UTR GCA 90 bp CTCCTCTTCTGGTGCAGGTACTGGCCGGCATCCTCAACCGTTCGGAAGGCCTCGGCGTGGAGGCCGTGGTaGGGCAGAACCGTTACGTTT +
Preference number: 4 (lower is better)
Translates to: LLFWCRYWPASSTVRKASAWRPW*GRTVTF
Trigger: AAACGTAACGGTTCTGCCGCACCACGGCCTCCACGC...CGAGGCCTTCCGAACGGTTGAGGATGCCGGCCAGTACCTGCACCAGAAGAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp CCGTGCTCCTCCATCAGGCTCCTCTTCTGGTGCAGGTACTGGCCGGCATCCTCAGGCAATGAAGAACCCTaGTGCGTGGAGGCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: PCSSIRLLFWCRYWPASSGNEEP*CVEAVV
Trigger: CACCACGGCCTCCACGCAGCAGGGTTCTTCATTGCC...TGAGGATGCCGGCCAGTACCTGCACCAGAAGAGGAGCCTGATGGAGGAGCACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp TGCTCCTCTGTCACGGCCTCAGGAGCGTCATCCTTCAGTCTCTGCCTCACGCTCCGTCGCAGCTCTGCCTaGTCCTCTGTCACGGCCTCA +
Preference number: 4 (lower is better)
Translates to: CSSVTASGASSFSLCLTLRRSSA*SSVTAS
Trigger: TGAGGCCGTGACAGAGGAGCAGGCAGAGCTGCGACG...GAGCGTGAGGCAGAGACTGAAGGATGACGCTCCTGAGGCCGTGACAGAGGAGCA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp CCGAGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCAGGATGGGGTGTGGATTaGAGGGTGGGGGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PSPCKLACATGSVPSACAGWGVD*RVGVSS
Trigger: GGAGGAGACCCCCACCCTGCAATCCACACCCCATCC...TGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp AGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCAATTAGGGCAAGTCCTGCGTaGTGCTCTCGGGCCCCGCCC +
Preference number: 4 (lower is better)
Translates to: SPCKLACATGSVPSACAIRASPA*CSRAPP
Trigger: GGGCGGGGCCCGAGAGCAGCACGCAGGACTTGCCCT...AATTGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344408.10
CDS-3UTR CCA 90 bp CATGAGGGCCATGACATTGTGTCAGCGCAGTGTGCCCACAGCTGGGCTCATAGGCTCGGGCCCGGATCTTaGGGAGGGCCAAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: HEGHDIVSAQCAHSWAHRLGPGS*GGPSSC
Trigger: ACAGGAGCTTGGCCCTCCCCAAGATCCGGGCCCGAG...CCTATGAGCCCAGCTGTGGGCACACTGCGCTGACACAATGTCATGGCCCTCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp CCGGATCTTGGGGAGGGCCAAGCTCCTGTCCATCTGAGCAAAGCAGCCATGGACAGCCTGGAGCGTGGCTaGGTAGCTGACAGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: PDLGEGQAPVHLSKAAMDSLERG*VADSKG
Trigger: GCCTTTGCTGTCAGCTACGCAGCCACGCTCCAGGCT...GTCCATGGCTGCTTTGCTCAGATGGACAGGAGCTTGGCCCTCCCCAAGATCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp CGTCATGAGGGCCATGACATTGTGTCAGCGCAGTGTGCCCACAGCTGGGCTCATTGGTCCAGACGCTCCTaGAGCTCCTCCAGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: RHEGHDIVSAQCAHSWAHWSRRS*SSSRVA
Trigger: TGCCACCCTGGAGGAGCTGCAGGAGCGTCTGGACCA...ATGAGCCCAGCTGTGGGCACACTGCGCTGACACAATGTCATGGCCCTCATGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp CCAAGTCATCCTCGTCATGAGGGCCATGACATTGTGTCAGCGCAGTGTGCCCACCCAGCGTCGCAGCTCTaGCTGCTCCTCTGTCACGGC +
Preference number: 4 (lower is better)
Translates to: PSHPRHEGHDIVSAQCAHPASQL*LLLCHG
Trigger: GCCGTGACAGAGGAGCAGGCAGAGCTGCGACGCTGG...GTGGGCACACTGCGCTGACACAATGTCATGGCCCTCATGACGAGGATGACTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp TGCTCCTCTGTCACGGCCTCAGGAGCGTCATCCTTCAGTCTCTGCCTCACGCTCACCTTGGACTGTTGCTaGAGCTCAGGGGCAGCCACG +
Preference number: 4 (lower is better)
Translates to: CSSVTASGASSFSLCLTLTLDCC*SSGAAT
Trigger: CGTGGCTGCCCCTGAGCTGCAGCAACAGTCCAAGGT...GAGCGTGAGGCAGAGACTGAAGGATGACGCTCCTGAGGCCGTGACAGAGGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp TGCTCCTCTGTCACGGCCTCAGGAGCGTCATCCTTCAGTCTCTGCCTCACGCTCTGGAGCTCCCGGCTGTaGGACTCCAGGATCTGTGTG +
Preference number: 4 (lower is better)
Translates to: CSSVTASGASSFSLCLTLWSSRL*DSRICV
Trigger: CACACAGATCCTGGAGTCGCACAGCCGGGAGCTCCA...GAGCGTGAGGCAGAGACTGAAGGATGACGCTCCTGAGGCCGTGACAGAGGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp AGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTCAGCTCGCCAGGGCCTaGTGCTGCTGGGCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: RESGCHHTDHSFCSRGWGQLARA*CCWAAS
Trigger: GGAGGCAGCCCAGCAGCAGCAGGCCCTGGCGAGCTG...ACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp CCTTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTGCCCATCGGCCACCCACTaGTGCCAGCTCGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PWCSRAILRKQRLQRLHCPSATH*CQLARA
Trigger: GGCCCTGGCGAGCTGGCAGCAGTGGGTGGCCGATGG...GCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp CCGGATCTTGGGGAGGGCCAAGCTCCTGTCCATCTGAGCAAAGCAGCCATGGACCCTCGCCAGGTACGATaGCAGTCTCAGCTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: PDLGEGQAPVHLSKAAMDPRQVR*QSQLLA
Trigger: AGCCAGGAGCTGAGACTGGCATCGTACCTGGCGAGG...GTCCATGGCTGCTTTGCTCAGATGGACAGGAGCTTGGCCCTCCCCAAGATCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp AGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTCTGCCCACGTCGGCCTaGTCCGCTCCGCCATCGCTC +
Preference number: 4 (lower is better)
Translates to: RESGCHHTDHSFCSRGWGLPTSA*SAPPSL
Trigger: GAGCGATGGCGGAGCGGAGCAGGCCGACGTGGGCAG...ACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp CTCCCAGGCCCTTCCTTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAAAACAGGCCAGCCGCTaGGCCACCTCTCTGGGGACC +
Preference number: 4 (lower is better)
Translates to: LPGPSLVFQGHITQTEAPKQASR*ATSLGT
Trigger: GGTCCCCAGAGAGGTGGCCCAGCGGCTGGCCTGTTT...TGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAAGGAAGGGCCTGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CCA 90 bp CCGAGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCATTCCTCTCCAACTCCTaGAGCTCCCGGCTGTGCGAC +
Preference number: 4 (lower is better)
Translates to: PSPCKLACATGSVPSACAFLSNS*SSRLCD
Trigger: GTCGCACAGCCGGGAGCTCCAGGAGTTGGAGAGGAA...TGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp CCGAGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCATCCTGCTGCACCAGCTaGTCCTCCAGCTTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: PSPCKLACATGSVPSACASCCTS*SSSFLS
Trigger: GGAGAGGAAGCTGGAGGACCAGCTGGTGCAGCAGGA...TGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp TCAGCTGGGCTGCAGCGGTGCTCAGAAGGCCCTGCACACGGGTCTCTGATGACTGCCAGTCTCAGCTCCTaGCTGCACAGGGTTGCAAAG +
Preference number: 4 (lower is better)
Translates to: SAGLQRCSEGPAHGSLMTASLSS*LHRVAK
Trigger: CTTTGCAACCCTGTGCAGCCAGGAGCTGAGACTGGC...AGTCATCAGAGACCCGTGTGCAGGGCCTTCTGAGCACCGCTGCAGCCCAGCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CCA 90 bp CCGTGCTCCTCCATCAGGCTCCTCTTCTGGTGCAGGTACTGGCCGGCATCCTCAGAGGCTGTGAGGCTGTaGGCAGTACCACACTCAGGA +
Preference number: 4 (lower is better)
Translates to: PCSSIRLLFWCRYWPASSEAVRL*AVPHSG
Trigger: TCCTGAGTGTGGTACTGCCCACAGCCTCACAGCCTC...TGAGGATGCCGGCCAGTACCTGCACCAGAAGAGGAGCCTGATGGAGGAGCACGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CCA 90 bp CCGAGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCACCACATGTCTCTCGGTaGCCGAATCCAGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: PSPCKLACATGSVPSACAPHVSR*PNPAGP
Trigger: TGGCCCTGCTGGATTCGGCCACCGAGAGACATGTGG...TGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp CGGCCTCAGGAGCGTCATCCTTCAGTCTCTGCCTCACGCTCTGGACACCCTCCTTCGCTCTCAGCTGCGTaGTCCACATGTCTCTCGGTG +
Preference number: 4 (lower is better)
Translates to: RPQERHPSVSASRSGHPPSLSAA*STCLSV
Trigger: CACCGAGAGACATGTGGACCACGCAGCTGAGAGCGA...AGGAGGGTGTCCAGAGCGTGAGGCAGAGACTGAAGGATGACGCTCCTGAGGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CCA 90 bp CCGAGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCACGAGTCCCTGCAAGTTaGCATGCGCTACGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: PSPCKLACATGSVPSACARVPAS*HALRGL
Trigger: CAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCG...TGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp AAACCGAGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGTTGGGCAGGAAGCTTaGGGCTCTCCCCGTTCCCGA +
Preference number: 4 (lower is better)
Translates to: KPSPCKLACATGSVPSACVGQEA*GSPRSR
Trigger: TCGGGAACGGGGAGAGCCTCAAGCTTCCTGCCCAAC...ACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp AAACCGAGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTAAAGGGTCAGGGTCCTaGGATCGTCCAGGGCGGCCT +
Preference number: 4 (lower is better)
Translates to: KPSPCKLACATGSVPSACKGSGS*DRPGRP
Trigger: AGGCCGCCCTGGACGATCTCAGGACCCTGACCCTTT...ACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp CCGAGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCACCTCCTGCCTCATCCTaGGCAGCTCCTCTTCAGACA +
Preference number: 4 (lower is better)
Translates to: PSPCKLACATGSVPSACAPPASS*AAPLQT
Trigger: TGTCTGAAGAGGAGCTGCTCAGGATGAGGCAGGAGG...TGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp GTAGGCCGACAGAGTCTCGGTCACCCGGGACGCCTTCTGGAACTGCAGAGCAACAAGCTCCTGTCCATCTaGGCAAAGCAGCCATGGACC +
Preference number: 4 (lower is better)
Translates to: VGRQSLGHPGRLLELQSNKLLSI*AKQPWT
Trigger: GGTCCATGGCTGCTTTGCTCAGATGGACAGGAGCTT...GTTGCTCTGCAGTTCCAGAAGGCGTCCCGGGTGACCGAGACTCTGTCGGCCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR TCA 90 bp AGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCAATTGCAAGTCCTGGATGCTaGGGAGGGCGGTGTAGGCCG +
Preference number: 4 (lower is better)
Translates to: SPCKLACATGSVPSACAIASPGC*GGRCRP
Trigger: CGGCCTACACCGCCCTCCTCAGCATCCAGGACTTGC...AATTGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp GAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTGTGCAGCTGAGCACCCACTaGCCGAGCCTGCTGTGGGTC +
Preference number: 4 (lower is better)
Translates to: ESGCHHTDHSFCSRGWGVQLSTH*PSLLWV
Trigger: GACCCACAGCAGGCTCGGGCAGTGGGTGCTCAGCTG...CACACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310917.6
CDS-3UTR GCA 90 bp CCGTGCTCCTCCATCAGGCTCCTCTTCTGGTGCAGGTACTGGCCGGCATCCTCAACCCTCACTTCCGGTTaGGTTCAGTGCAGACCAGCT +
Preference number: 4 (lower is better)
Translates to: PCSSIRLLFWCRYWPASSTLTSG*VQCRPA
Trigger: AGCTGGTCTGCACTGAACGCAACCGGAAGTGAGGGT...TGAGGATGCCGGCCAGTACCTGCACCAGAAGAGGAGCCTGATGGAGGAGCACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp ACTGGCCGGCATCCTCAACCGTTCGGAAGGCCTCGCCGACGGACGCCTGCTCCCAAGTGGTGCTTCCACTaGAGTCTTAAAGTGACAGCA +
Preference number: 4 (lower is better)
Translates to: TGRHPQPFGRPRRRTPAPKWCFH*SLKVTA
Trigger: TGCTGTCACTTTAAGACTGCAGTGGAAGCACCACTT...GGGAGCAGGCGTCCGTCGGCGAGGCCTTCCGAACGGTTGAGGATGCCGGCCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp GAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTGTGGCTGGGCTGCAGCGGTaGTCAGAAGGCCCTGCACAC +
Preference number: 4 (lower is better)
Translates to: ESGCHHTDHSFCSRGWGVAGLQR*SEGPAH
Trigger: GTGTGCAGGGCCTTCTGAGCACCGCTGCAGCCCAGC...CACACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp GGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTGCTCAGTCCGAGGTATCGCCGACGGACGCCTaGTCCCTACGCTGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: GPYYANRGSNDCTAQSEVSPTDA*SLRCSL
Trigger: CAGGGAGCAGCGTAGGGAGCAGGCGTCCGTCGGCGA...TACCTCGGACTGAGCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp CGTCATGAGGGCCATGACATTGTGTCAGCGCAGTGTGCCCACAGCTGGGCTCATTCCTCCAGGATCTGCTaGAGGAAGAGCCAGGGCACC +
Preference number: 4 (lower is better)
Translates to: RHEGHDIVSAQCAHSWAHSSRIC*RKSQGT
Trigger: GGTGCCCTGGCTCTTCCTGCAGCAGATCCTGGAGGA...ATGAGCCCAGCTGTGGGCACACTGCGCTGACACAATGTCATGGCCCTCATGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp CCTTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTGCTCCTCCCCCTCCAGCTaGTCGGCCCGTGCAGCCATC +
Preference number: 4 (lower is better)
Translates to: PWCSRAILRKQRLQRLHCSSPSS*SARAAI
Trigger: GATGGCTGCACGGGCCGAGCAGCTGGAGGGGGAGGA...GCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp GAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTGTGCCAGCGTCGCAGCTCTaGCTGCTCCTCTGTCACGGC +
Preference number: 4 (lower is better)
Translates to: ESGCHHTDHSFCSRGWGVPASQL*LLLCHG
Trigger: GCCGTGACAGAGGAGCAGGCAGAGCTGCGACGCTGG...CACACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp CGGCCTCAGGAGCGTCATCCTTCAGTCTCTGCCTCACGCTCTGGACACCCTCCTAGCAACAAGCGACTGTaGAAAGCCTCCCTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: RPQERHPSVSASRSGHPPSNKRL*KASLLC
Trigger: GCACAGGAGGGAGGCTTTGCACAGTCGCTTGTTGCT...AGGAGGGTGTCCAGAGCGTGAGGCAGAGACTGAAGGATGACGCTCCTGAGGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp CGGCCTCAGGAGCGTCATCCTTCAGTCTCTGCCTCACGCTCTGGACACCCTCCTACTCCAGGATCTGTGTaGAGGCCGACTTGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: RPQERHPSVSASRSGHPPTPGSV*RPTWSA
Trigger: TGCTGACCAAGTCGGCCTGCACACAGATCCTGGAGT...AGGAGGGTGTCCAGAGCGTGAGGCAGAGACTGAAGGATGACGCTCCTGAGGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp AGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCAATTTGGGCTGCCTCCTGCTaGACCAGCTGGTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SPCKLACATGSVPSACAIWAASC*TSWSSS
Trigger: GCTGGAGGACCAGCTGGTGCAGCAGGAGGCAGCCCA...AATTGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp TCAGGATTGGCTCCTCCAAGTCATCCTCGTCATGAGGGCCATGACATTGTGTCACAGCTCGCCAGGGCCTaGTGCTGCTGGGCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: SGLAPPSHPRHEGHDIVSQLARA*CCWAAS
Trigger: GGAGGCAGCCCAGCAGCAGCAGGCCCTGGCGAGCTG...TGACACAATGTCATGGCCCTCATGACGAGGATGACTTGGAGGAGCCAATCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp TTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTGCTCCTGCCCACGTCGGCCTaGTCCGCTCCGCCATCGCTC +
Preference number: 4 (lower is better)
Translates to: LVFQGHITQTEAPTIALLLPTSA*SAPPSL
Trigger: GAGCGATGGCGGAGCGGAGCAGGCCGACGTGGGCAG...GAGCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp GCAGCGGTGCTCAGAAGGCCCTGCACACGGGTCTCTGATGACTGGAGGTTCTGGTTCCTGGGAGGAACGTaGAGTGAGATCTCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: AAVLRRPCTRVSDDWRFWFLGGT*SEISGS
Trigger: GGAGCCAGAGATCTCACTGCACGTTCCTCCCAGGAA...CCAGAACCTCCAGTCATCAGAGACCCGTGTGCAGGGCCTTCTGAGCACCGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp TGCTGCAGCAGAACTCGGGCCCGGATCTTGGGGAGGGCCAAGCTCCTGTCCATCTCCGCAGAAGGTTGCTaGACTCTACAGCAGACAGCA +
Preference number: 4 (lower is better)
Translates to: CCSRTRARILGRAKLLSISAEGC*TLQQTA
Trigger: TGCTGTCTGCTGTAGAGTGCAGCAACCTTCTGCGGA...GATGGACAGGAGCTTGGCCCTCCCCAAGATCCGGGCCCGAGTTCTGCTGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CCA 90 bp AAACCGAGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTCCCTCGCATTCCCAGTaGGAAACAGGCCAGCCGCTG +
Preference number: 4 (lower is better)
Translates to: KPSPCKLACATGSVPSACPSHSQ*ETGQPL
Trigger: CAGCGGCTGGCCTGTTTCCCACTGGGAATGCGAGGG...ACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310917.6
CDS-3UTR CCA 90 bp GAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTGTGCGGGGCCGGGAGTCCTaGAGCACCCAGAAGGTTCAG +
Preference number: 4 (lower is better)
Translates to: ESGCHHTDHSFCSRGWGVRGRES*STQKVQ
Trigger: CTGAACCTTCTGGGTGCTCCAGGACTCCCGGCCCCG...CACACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310917.6
CDS-3UTR CCA 90 bp AAACCGAGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTAAGAACCCTGCTGCGTaGAGGCCGTGGTGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: KPSPCKLACATGSVPSACKNPAA*RPWCGR
Trigger: TCTGCCGCACCACGGCCTCCACGCAGCAGGGTTCTT...ACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp ACTGGCCGGCATCCTCAACCGTTCGGAAGGCCTCGCCGACGGACGCCTGCTCCCGCCATCATCTCTCTCTaGTACTGGTTTTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: TGRHPQPFGRPRRRTPAPAIISL*YWFSIF
Trigger: GAAGATGGAAAACCAGTACCAGAGAGAGATGATGGC...GGGAGCAGGCGTCCGTCGGCGAGGCCTTCCGAACGGTTGAGGATGCCGGCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CCA 90 bp CCGAGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCAATCAGGCTCCTCTTCTaGTGCAGGTACTGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: PSPCKLACATGSVPSACAIRLLF*CRYWPA
Trigger: TGCCGGCCAGTACCTGCACCAGAAGAGGAGCCTGAT...TGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp CTGGCTCTTGCTCAGGGCTTGGTGCAGGACAGTAGAGACCTGCCTTTCAGAATCCTCGGGCCCGGATCTTaGGGAGGGCCAAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: LALAQGLVQDSRDLPFRILGPGS*GGPSSC
Trigger: ACAGGAGCTTGGCCCTCCCCAAGATCCGGGCCCGAG...GATTCTGAAAGGCAGGTCTCTACTGTCCTGCACCAAGCCCTGAGCAAGAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CCA 90 bp GTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTGCTCAGTCCTGGCCCCGGGCACCATaGCCATCCTCGCCAGGTACG +
Preference number: 4 (lower is better)
Translates to: VPGPYYANRGSNDCTAQSWPRAP*PSSPGT
Trigger: CGTACCTGGCGAGGATGGCCATGGTGCCCGGGGCCA...GGACTGAGCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475313.5
3UTR CAA 72 bp CGGCTGTGCGACTCCAGGATCTGTGTGCAGGCCGACTaGGTCAGCATCTCAGATGCACTCAGCTCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: RLCDSRICVQAD*VSISDALSSSR
Trigger: CCTGGAAGAGCTGAGTGCATCTGAGATGCTGACCAAGTCGGCCTGCACACAGATCCTGGAGTCGCACAGCCG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR TCA 90 bp GTAGGCCGACAGAGTCTCGGTCACCCGGGACGCCTTCTGGAACTGCAGAGCAACCCTGACACACGGATGTaGATCCAGAGTTTCCCCATC +
Preference number: 4 (lower is better)
Translates to: VGRQSLGHPGRLLELQSNPDTRM*IQSFPI
Trigger: GATGGGGAAACTCTGGATTCACATCCGTGTGTCAGG...GTTGCTCTGCAGTTCCAGAAGGCGTCCCGGGTGACCGAGACTCTGTCGGCCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR TCA 90 bp CCGAGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCACTCCGAGAGGTTGGCTaGCGAGGTTGTCTTGGTGTT +
Preference number: 4 (lower is better)
Translates to: PSPCKLACATGSVPSACALREVG*RGCLGV
Trigger: AACACCAAGACAACCTCGTCAGCCAACCTCTCGGAG...TGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp CCGAGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCAAGAGGAGGAAGGCAATaGAGAACCCTGCTGCGTGGA +
Preference number: 4 (lower is better)
Translates to: PSPCKLACATGSVPSACARGGRQ*RTLLRG
Trigger: TCCACGCAGCAGGGTTCTTCATTGCCTTCCTCCTCT...TGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp AAACCGAGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTCGCCATCAGCTGAGGTaGACGGCAAGGGTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: KPSPCKLACATGSVPSACRHQLR*TARVPA
Trigger: AGCTGGAACCCTTGCCGTTCACCTCAGCTGATGGCG...ACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp GAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTGTGAAAGGGTCAGGGTCCTaGGATCGTCCAGGGCGGCCT +
Preference number: 4 (lower is better)
Translates to: ESGCHHTDHSFCSRGWGVKGSGS*DRPGRP
Trigger: AGGCCGCCCTGGACGATCTCAGGACCCTGACCCTTT...CACACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp CGGCCTCAGGAGCGTCATCCTTCAGTCTCTGCCTCACGCTCTGGACACCCTCCTTCTCGCCACGCAGTCTaGAATTGCTGCAGCAGAACT +
Preference number: 4 (lower is better)
Translates to: RPQERHPSVSASRSGHPPSRHAV*NCCSRT
Trigger: AGTTCTGCTGCAGCAATTTCAGACTGCGTGGCGAGA...AGGAGGGTGTCCAGAGCGTGAGGCAGAGACTGAAGGATGACGCTCCTGAGGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR TCA 90 bp GTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTGCTCAGTCCGCAAGTCCTGGATGCTaGGGAGGGCGGTGTAGGCCG +
Preference number: 4 (lower is better)
Translates to: VPGPYYANRGSNDCTAQSASPGC*GGRCRP
Trigger: CGGCCTACACCGCCCTCCTCAGCATCCAGGACTTGC...GGACTGAGCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp GGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTGCTCAGTCCGAGGTAGCTGGGCTGCAGCGGTaGTCAGAAGGCCCTGCACAC +
Preference number: 4 (lower is better)
Translates to: GPYYANRGSNDCTAQSEVAGLQR*SEGPAH
Trigger: GTGTGCAGGGCCTTCTGAGCACCGCTGCAGCCCAGC...TACCTCGGACTGAGCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp CTGGTCCAGCTTCACGAACTCTGCTTCTCGCCACGCAGTCTGAAATTGCTGCAGGTGAGTCAGCTGGGCTaGAGCGGTGCTCAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: LVQLHELCFSPRSLKLLQVSQLG*SGAQKA
Trigger: GGCCTTCTGAGCACCGCTGCAGCCCAGCTGACTCAC...CTGCAGCAATTTCAGACTGCGTGGCGAGAAGCAGAGTTCGTGAAGCTGGACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp ATAGATCAATGGTTTCTGCCCCTACAATGGGTACAGGGGCCAGTTCGCCAATGGTCGCCGACGGACGCCTaGTCCCTACGCTGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: IDQWFLPLQWVQGPVRQWSPTDA*SLRCSL
Trigger: CAGGGAGCAGCGTAGGGAGCAGGCGTCCGTCGGCGA...CCATTGGCGAACTGGCCCCTGTACCCATTGTAGGGGCAGAAACCATTGATCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp AGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCAATTTCCAGGGTGGCACCGTaGTCCTCCATCAGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: SPCKLACATGSVPSACAISRVAP*SSIRLL
Trigger: GAGGAGCCTGATGGAGGAGCACGGTGCCACCCTGGA...AATTGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp AGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCAATTTGGTCCAGACGCTCCTaGAGCTCCTCCAGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: SPCKLACATGSVPSACAIWSRRS*SSSRVA
Trigger: TGCCACCCTGGAGGAGCTGCAGGAGCGTCTGGACCA...AATTGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp TGGCCCCGGGCACCATGGCCATCCTCGCCAGGTACGATGCCAGTCTCAGCTCCTTCAGAAGCTCTCCCTTaGTTTTACTCTTGGACCGTG +
Preference number: 4 (lower is better)
Translates to: WPRAPWPSSPGTMPVSAPSEALP*FYSWTV
Trigger: CACGGTCCAAGAGTAAAAGCAAGGGAGAGCTTCTGA...AGGAGCTGAGACTGGCATCGTACCTGGCGAGGATGGCCATGGTGCCCGGGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp CCGAGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCAACTCCAGGATCTGTGTaGAGGCCGACTTGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: PSPCKLACATGSVPSACATPGSV*RPTWSA
Trigger: TGCTGACCAAGTCGGCCTGCACACAGATCCTGGAGT...TGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp CACCAGGTCTTCAGAGGCCTGTTCCTCACAGAGGTGAATTTTGTCTTCGATGCACCATCGGCCACCCACTaGTGCCAGCTCGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: HQVFRGLFLTEVNFVFDAPSATH*CQLARA
Trigger: GGCCCTGGCGAGCTGGCAGCAGTGGGTGGCCGATGG...TGCATCGAAGACAAAATTCACCTCTGTGAGGAACAGGCCTCTGAAGACCTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp AGGTACTGGCCGGCATCCTCAACCGTTCGGAAGGCCTCGCCGACGGACGCCTGCTTCTTTAATATGCTCTaGTTTCTCTTGCGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: RYWPASSTVRKASPTDACFFNML*FLLRAH
Trigger: GTGGGCCCGCAAGAGAAAGCAGAGCATATTAAAGAA...GCAGGCGTCCGTCGGCGAGGCCTTCCGAACGGTTGAGGATGCCGGCCAGTACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp GAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTGTGGGATGGGGTGTGGATTaGAGGGTGGGGGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: ESGCHHTDHSFCSRGWGVGWGVD*RVGVSS
Trigger: GGAGGAGACCCCCACCCTGCAATCCACACCCCATCC...CACACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp GGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGCAGCGCCAGGGCCACTaGCAGGAGACCCCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: GGGAERRSVYVLVIWKRVQRQGH*QETPGQ
Trigger: CTGGCCGGGGGTCTCCTGGCAGTGGCCCTGGCGCTG...CACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344408.10
CDS-3UTR GCA 90 bp GGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGGCAAGTCCTGCGTGCTaGTCTCGGGCCCCGCCCCGC +
Preference number: 4 (lower is better)
Translates to: GGGAERRSVYVLVIWKRVASPAC*SRAPPR
Trigger: GCGGGGCGGGGCCCGAGAGCAGCACGCAGGACTTGC...CACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344408.10
CDS-3UTR CCA 90 bp GGTCAGTTGTCAGGATTGGCTCCTCCAAGTCATCCTCGTCATGAGGGCCATGACCCCTCGCATTCCCAGTaGGAAACAGGCCAGCCGCTG +
Preference number: 4 (lower is better)
Translates to: GQLSGLAPPSHPRHEGHDPSHSQ*ETGQPL
Trigger: CAGCGGCTGGCCTGTTTCCCACTGGGAATGCGAGGG...GTCATGGCCCTCATGACGAGGATGACTTGGAGGAGCCAATCCTGACAACTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CCA 90 bp CTTGCTCAGGGCTTGGTGCAGGACAGTAGAGACCTGCCTTTCAGAATCCACCTCAAGAACCCTGCTGCGTaGAGGCCGTGGTGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: LAQGLVQDSRDLPFRIHLKNPAA*RPWCGR
Trigger: TCTGCCGCACCACGGCCTCCACGCAGCAGGGTTCTT...GAGGTGGATTCTGAAAGGCAGGTCTCTACTGTCCTGCACCAAGCCCTGAGCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CCA 90 bp GAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTGTGGCAGCTCCTGGGTCATaGCTGAGTTCTGCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: ESGCHHTDHSFCSRGWGVAAPGS*LSSAGA
Trigger: GGCGCCTGCAGAACTCAGCCATGACCCAGGAGCTGC...CACACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp GGATTGGCTCCTCCAAGTCATCCTCGTCATGAGGGCCATGACATTGTGTCAGCGGCAGCTCCTGGGTCATaGCTGAGTTCTGCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: GLAPPSHPRHEGHDIVSAAAPGS*LSSAGA
Trigger: GGCGCCTGCAGAACTCAGCCATGACCCAGGAGCTGC...CGCTGACACAATGTCATGGCCCTCATGACGAGGATGACTTGGAGGAGCCAATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CCA 90 bp TGTGCCTCCATCCGCTGCACTCTCTCCCGCAGCAATTCACCTCGAACCTTTTCCTCCTGCTGCACCAGCTaGTCCTCCAGCTTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: CASIRCTLSRSNSPRTFSSCCTS*SSSFLS
Trigger: GGAGAGGAAGCTGGAGGACCAGCTGGTGCAGCAGGA...GGAAAAGGTTCGAGGTGAATTGCTGCGGGAGAGAGTGCAGCGGATGGAGGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CCA 90 bp TGGGGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGGAGCCGGCGAAGCGTaGCCCCGGGCACCATGGCCA +
Preference number: 4 (lower is better)
Translates to: WGGGAERRSVYVLVIWKRGAGEA*PRAPWP
Trigger: TGGCCATGGTGCCCGGGGCCACGCTTCGCCGGCTCC...TCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp CTCCAACGATTGCACTGCTCAGTCCGAGGTAACTCATCTATGTTTGGGACAAACGGAGCCGGCGAAGCGTaGCCCCGGGCACCATGGCCA +
Preference number: 4 (lower is better)
Translates to: LQRLHCSVRGNSSMFGTNGAGEA*PRAPWP
Trigger: TGGCCATGGTGCCCGGGGCCACGCTTCGCCGGCTCC...GTTTGTCCCAAACATAGATGAGTTACCTCGGACTGAGCAGTGCAATCGTTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CCA 90 bp CGTCATGAGGGCCATGACATTGTGTCAGCGCAGTGTGCCCACAGCTGGGCTCATGAGGCTGTGAGGCTGTaGGCAGTACCACACTCAGGA +
Preference number: 4 (lower is better)
Translates to: RHEGHDIVSAQCAHSWAHEAVRL*AVPHSG
Trigger: TCCTGAGTGTGGTACTGCCCACAGCCTCACAGCCTC...ATGAGCCCAGCTGTGGGCACACTGCGCTGACACAATGTCATGGCCCTCATGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CCA 90 bp CCGAGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCATTTCTGCCCCTACAATaGGTACAGGGGCCAGTTCGC +
Preference number: 4 (lower is better)
Translates to: PSPCKLACATGSVPSACAFLPLQ*VQGPVR
Trigger: GCGAACTGGCCCCTGTACCCATTGTAGGGGCAGAAA...TGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp CCGTGCTCCTCCATCAGGCTCCTCTTCTGGTGCAGGTACTGGCCGGCATCCTCACCCTTGAACTTCTCTTaGAATGTCCCCATACAGGCG +
Preference number: 4 (lower is better)
Translates to: PCSSIRLLFWCRYWPASSPLNFS*NVPIQA
Trigger: CGCCTGTATGGGGACATTTCAAGAGAAGTTCAAGGG...TGAGGATGCCGGCCAGTACCTGCACCAGAAGAGGAGCCTGATGGAGGAGCACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR TCA 90 bp CCTTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTGCGTTGGGCAGGAAGCTTaGGGCTCTCCCCGTTCCCGA +
Preference number: 4 (lower is better)
Translates to: PWCSRAILRKQRLQRLHCVGQEA*GSPRSR
Trigger: TCGGGAACGGGGAGAGCCTCAAGCTTCCTGCCCAAC...GCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR TCA 90 bp CCGAGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCACTGTGTTCTGTTCCGTaGCGAGCTCTGAAAGGTGAG +
Preference number: 4 (lower is better)
Translates to: PSPCKLACATGSVPSACALCSVP*RALKGE
Trigger: CTCACCTTTCAGAGCTCGTCACGGAACAGAACACAG...TGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp CTCCCAGGCCCTTCCTTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACTGATAGCGAACCATaGGGAAGAGGGCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LPGPSLVFQGHITQTEAPTDSEP*GRGQPR
Trigger: CCTGGGCTGCCCTCTTCCTCATGGTTCGCTATCAGT...TGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAAGGAAGGGCCTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR TCA 90 bp GGATTGGCTCCTCCAAGTCATCCTCGTCATGAGGGCCATGACATTGTGTCAGCGCGCCATCAGCTGAGGTaGACGGCAAGGGTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GLAPPSHPRHEGHDIVSARHQLR*TARVPA
Trigger: AGCTGGAACCCTTGCCGTTCACCTCAGCTGATGGCG...CGCTGACACAATGTCATGGCCCTCATGACGAGGATGACTTGGAGGAGCCAATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR TCA 90 bp CTTTCCCTTGGGCTAGTCCATGCCCAAGGCCCTCATGGCCTTTTTGGCATTCAAAAAGGGTCAGGGTCCTaGGATCGTCCAGGGCGGCCT +
Preference number: 4 (lower is better)
Translates to: LSLGLVHAQGPHGLFGIQKGSGS*DRPGRP
Trigger: AGGCCGCCCTGGACGATCTCAGGACCCTGACCCTTT...TTGAATGCCAAAAAGGCCATGAGGGCCTTGGGCATGGACTAGCCCAAGGGAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR TCA 90 bp CGTCATGAGGGCCATGACATTGTGTCAGCGCAGTGTGCCCACAGCTGGGCTCATAGGAGCAGAGCTTCATaGAGATCAGGTGCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: RHEGHDIVSAQCAHSWAHRSRAS*RSGAPS
Trigger: GCTGGGAGCACCTGATCTTCATGAAGCTCTGCTCCT...ATGAGCCCAGCTGTGGGCACACTGCGCTGACACAATGTCATGGCCCTCATGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp GGCCATCTGGAAATTCATGAGACAAGATTAAACCGAGTCCCTGCAAGTTGGCATCTGGGCCGGCCCGGGTaGCCCTCGCATTCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: GHLEIHETRLNRVPASWHLGRPG*PSHSQW
Trigger: CCACTGGGAATGCGAGGGGCACCCGGGCCGGCCCAG...ATGCCAACTTGCAGGGACTCGGTTTAATCTTGTCTCATGAATTTCCAGATGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310917.6
CDS-3UTR GCA 90 bp CCTTCCTTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACAGCTGAGCACCCACTaGCCGAGCCTGCTGTGGGTC +
Preference number: 4 (lower is better)
Translates to: PSLVFQGHITQTEAPTIAQLSTH*PSLLWV
Trigger: GACCCACAGCAGGCTCGGGCAGTGGGTGCTCAGCTG...TGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAAGGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp AGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCAATTAGCCTGGAGCGTGGCTaGGTAGCTGACAGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: SPCKLACATGSVPSACAISLERG*VADSKG
Trigger: GCCTTTGCTGTCAGCTACGCAGCCACGCTCCAGGCT...AATTGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp GCTCCTCCAAGTCATCCTCGTCATGAGGGCCATGACATTGTGTCAGCGCAGTGTGCGTGGAGGCCGTGGTaGGGCAGAACCGTTACGTTT +
Preference number: 4 (lower is better)
Translates to: APPSHPRHEGHDIVSAQCAWRPW*GRTVTF
Trigger: AAACGTAACGGTTCTGCCGCACCACGGCCTCCACGC...ACACTGCGCTGACACAATGTCATGGCCCTCATGACGAGGATGACTTGGAGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp GGATTGGCTCCTCCAAGTCATCCTCGTCATGAGGGCCATGACATTGTGTCAGCGGGCAATGAAGAACCCTaGTGCGTGGAGGCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: GLAPPSHPRHEGHDIVSAGNEEP*CVEAVV
Trigger: CACCACGGCCTCCACGCAGCAGGGTTCTTCATTGCC...CGCTGACACAATGTCATGGCCCTCATGACGAGGATGACTTGGAGGAGCCAATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp CCGGATCTTGGGGAGGGCCAAGCTCCTGTCCATCTGAGCAAAGCAGCCATGGACGCAAGGGTTCCAGCTTaGTCTCATACTGCCAAACCC +
Preference number: 4 (lower is better)
Translates to: PDLGEGQAPVHLSKAAMDARVPA*SHTAKP
Trigger: GGGTTTGGCAGTATGAGAGCAAGCTGGAACCCTTGC...GTCCATGGCTGCTTTGCTCAGATGGACAGGAGCTTGGCCCTCCCCAAGATCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp CCGTGCTCCTCCATCAGGCTCCTCTTCTGGTGCAGGTACTGGCCGGCATCCTCACTCCAGATCTGCATCTaGCCGATTCAGGGTTGCAAT +
Preference number: 4 (lower is better)
Translates to: PCSSIRLLFWCRYWPASSLQICI*PIQGCN
Trigger: ATTGCAACCCTGAATCGGGCAGATGCAGATCTGGAG...TGAGGATGCCGGCCAGTACCTGCACCAGAAGAGGAGCCTGATGGAGGAGCACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp TGTGCCTCCATCCGCTGCACTCTCTCCCGCAGCAATTCACCTCGAACCTTTTCCGTGCTCAGAAGGCCCTaGACACGGGTCTCTGATGAC +
Preference number: 4 (lower is better)
Translates to: CASIRCTLSRSNSPRTFSVLRRP*TRVSDD
Trigger: GTCATCAGAGACCCGTGTGCAGGGCCTTCTGAGCAC...GGAAAAGGTTCGAGGTGAATTGCTGCGGGAGAGAGTGCAGCGGATGGAGGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp CTTGCTCAGGGCTTGGTGCAGGACAGTAGAGACCTGCCTTTCAGAATCCACCTCTCCTCCAGGATCTGCTaGAGGAAGAGCCAGGGCACC +
Preference number: 4 (lower is better)
Translates to: LAQGLVQDSRDLPFRIHLSSRIC*RKSQGT
Trigger: GGTGCCCTGGCTCTTCCTGCAGCAGATCCTGGAGGA...GAGGTGGATTCTGAAAGGCAGGTCTCTACTGTCCTGCACCAAGCCCTGAGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp CTTGCTCAGGGCTTGGTGCAGGACAGTAGAGACCTGCCTTTCAGAATCCACCTCGCCATCTCCTTGCCGTaGTCCTCCAGGATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LAQGLVQDSRDLPFRIHLAISLP*SSRICC
Trigger: GCAGCAGATCCTGGAGGAGCACGGCAAGGAGATGGC...GAGGTGGATTCTGAAAGGCAGGTCTCTACTGTCCTGCACCAAGCCCTGAGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp TCAGGATTGGCTCCTCCAAGTCATCCTCGTCATGAGGGCCATGACATTGTGTCACAGCTGCTCGGCCCGTaGAGCCATCTCCTTGCCGTG +
Preference number: 4 (lower is better)
Translates to: SGLAPPSHPRHEGHDIVSQLLGP*SHLLAV
Trigger: CACGGCAAGGAGATGGCTGCACGGGCCGAGCAGCTG...TGACACAATGTCATGGCCCTCATGACGAGGATGACTTGGAGGAGCCAATCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp CGTCATGAGGGCCATGACATTGTGTCAGCGCAGTGTGCCCACAGCTGGGCTCATTCATCCTTCAGTCTCTaGCTCACGCTCTGGACACCC +
Preference number: 4 (lower is better)
Translates to: RHEGHDIVSAQCAHSWAHSSFSL*LTLWTP
Trigger: GGGTGTCCAGAGCGTGAGGCAGAGACTGAAGGATGA...ATGAGCCCAGCTGTGGGCACACTGCGCTGACACAATGTCATGGCCCTCATGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp CCGAGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCAGACGCCTTCTGGAACTaGAGAGCAACAAGCGACTGT +
Preference number: 4 (lower is better)
Translates to: PSPCKLACATGSVPSACADAFWN*RATSDC
Trigger: ACAGTCGCTTGTTGCTCTGCAGTTCCAGAAGGCGTC...TGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp AGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCAATTCCTCGCCAGGTACGATaGCAGTCTCAGCTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: SPCKLACATGSVPSACAIPRQVR*QSQLLA
Trigger: AGCCAGGAGCTGAGACTGGCATCGTACCTGGCGAGG...AATTGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp GTGTGGCCAACTTCCTTTTCCAGAGAATATCATCCTCTCTCTGAGAGGGAGACACTGCCCACGTCGGCCTaGTCCGCTCCGCCATCGCTC +
Preference number: 4 (lower is better)
Translates to: VWPTSFSREYHPLSERETLPTSA*SAPPSL
Trigger: GAGCGATGGCGGAGCGGAGCAGGCCGACGTGGGCAG...TGTCTCCCTCTCAGAGAGAGGATGATATTCTCTGGAAAAGGAAGTTGGCCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CCA 90 bp CAGTTGTCAGGATTGGCTCCTCCAAGTCATCCTCGTCATGAGGGCCATGACATTCGGGGCCGGGAGTCCTaGAGCACCCAGAAGGTTCAG +
Preference number: 4 (lower is better)
Translates to: QLSGLAPPSHPRHEGHDIRGRES*STQKVQ
Trigger: CTGAACCTTCTGGGTGCTCCAGGACTCCCGGCCCCG...AATGTCATGGCCCTCATGACGAGGATGACTTGGAGGAGCCAATCCTGACAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CCA 90 bp AGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCAATTAAACGGAGAAGCATTTaGAGCGCGGGGCCGGGAGTC +
Preference number: 4 (lower is better)
Translates to: SPCKLACATGSVPSACAIKRRSI*SAGPGV
Trigger: GACTCCCGGCCCCGCGCTCCAAATGCTTCTCCGTTT...AATTGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310917.6
CDS-3UTR CCA 90 bp TTGTCAGGATTGGCTCCTCCAAGTCATCCTCGTCATGAGGGCCATGACATTGTGGCTGCGTGGAGGCCGTaGTGCGGCAGAACCGTTACG +
Preference number: 4 (lower is better)
Translates to: LSGLAPPSHPRHEGHDIVAAWRP*CGRTVT
Trigger: CGTAACGGTTCTGCCGCACCACGGCCTCCACGCAGC...CACAATGTCATGGCCCTCATGACGAGGATGACTTGGAGGAGCCAATCCTGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CCA 90 bp ATAGATCAATGGTTTCTGCCCCTACAATGGGTACAGGGGCCAGTTCGCCAATGGGCTGCGTGGAGGCCGTaGTGCGGCAGAACCGTTACG +
Preference number: 4 (lower is better)
Translates to: IDQWFLPLQWVQGPVRQWAAWRP*CGRTVT
Trigger: CGTAACGGTTCTGCCGCACCACGGCCTCCACGCAGC...CCATTGGCGAACTGGCCCCTGTACCCATTGTAGGGGCAGAAACCATTGATCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CCA 90 bp AAACCGAGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTATCAGGCTCCTCTTCTaGTGCAGGTACTGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: KPSPCKLACATGSVPSACIRLLF*CRYWPA
Trigger: TGCCGGCCAGTACCTGCACCAGAAGAGGAGCCTGAT...ACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp TGTGCCTCCATCCGCTGCACTCTCTCCCGCAGCAATTCACCTCGAACCTTTTCCATCAGGCTCCTCTTCTaGTGCAGGTACTGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: CASIRCTLSRSNSPRTFSIRLLF*CRYWPA
Trigger: TGCCGGCCAGTACCTGCACCAGAAGAGGAGCCTGAT...GGAAAAGGTTCGAGGTGAATTGCTGCGGGAGAGAGTGCAGCGGATGGAGGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CCA 90 bp GTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTGCTCAGTCCGCAGCTCCTCCAGGGTaGCACCGTGCTCCTCCATCA +
Preference number: 4 (lower is better)
Translates to: VPGPYYANRGSNDCTAQSAAPPG*HRAPPS
Trigger: TGATGGAGGAGCACGGTGCCACCCTGGAGGAGCTGC...GGACTGAGCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CCA 90 bp AGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTGCAGCTCCTGGGTCATaGCTGAGTTCTGCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: RESGCHHTDHSFCSRGWGAAPGS*LSSAGA
Trigger: GGCGCCTGCAGAACTCAGCCATGACCCAGGAGCTGC...ACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp GGACGCCTTCTGGAACTGCAGAGCAACAAGCGACTGTGCAAAGCCTCCCTCCTGGTGTGCAGGCCGACTTaGTCAGCATCTCAGATGCAC +
Preference number: 4 (lower is better)
Translates to: GRLLELQSNKRLCKASLLVCRPT*SASQMH
Trigger: GTGCATCTGAGATGCTGACCAAGTCGGCCTGCACAC...CAGGAGGGAGGCTTTGCACAGTCGCTTGTTGCTCTGCAGTTCCAGAAGGCGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CCA 90 bp AAACCGAGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCCAGTCTCAGCTCCTaGCTGCACAGGGTTGCAAAG +
Preference number: 4 (lower is better)
Translates to: KPSPCKLACATGSVPSACASLSS*LHRVAK
Trigger: CTTTGCAACCCTGTGCAGCCAGGAGCTGAGACTGGC...ACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp GTTGTGCATTATAAACACACAAACACCGGCGGGCAGGAGAAAATCATCCCTTCTGGAGCCGGCGAAGCGTaGCCCCGGGCACCATGGCCA +
Preference number: 4 (lower is better)
Translates to: VVHYKHTNTGGQEKIIPSGAGEA*PRAPWP
Trigger: TGGCCATGGTGCCCGGGGCCACGCTTCGCCGGCTCC...AGAAGGGATGATTTTCTCCTGCCCGCCGGTGTTTGTGTGTTTATAATGCACAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp TTGCAAAGGTGTCTGCCTCCATGTTTTCCAACAAGTCTTCTAGCACGACACTGTGGAGCCGGCGAAGCGTaGCCCCGGGCACCATGGCCA +
Preference number: 4 (lower is better)
Translates to: LQRCLPPCFPTSLLARHCGAGEA*PRAPWP
Trigger: TGGCCATGGTGCCCGGGGCCACGCTTCGCCGGCTCC...ACAGTGTCGTGCTAGAAGACTTGTTGGAAAACATGGAGGCAGACACCTTTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CCA 90 bp GGATTGGCTCCTCCAAGTCATCCTCGTCATGAGGGCCATGACATTGTGTCAGCGCCACATGTCTCTCGGTaGCCGAATCCAGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: GLAPPSHPRHEGHDIVSAPHVSR*PNPAGP
Trigger: TGGCCCTGCTGGATTCGGCCACCGAGAGACATGTGG...CGCTGACACAATGTCATGGCCCTCATGACGAGGATGACTTGGAGGAGCCAATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CCA 90 bp CTTGCTCAGGGCTTGGTGCAGGACAGTAGAGACCTGCCTTTCAGAATCCACCTCCCACATGTCTCTCGGTaGCCGAATCCAGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: LAQGLVQDSRDLPFRIHLPHVSR*PNPAGP
Trigger: TGGCCCTGCTGGATTCGGCCACCGAGAGACATGTGG...GAGGTGGATTCTGAAAGGCAGGTCTCTACTGTCCTGCACCAAGCCCTGAGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CCA 90 bp CAGGGTGGCACCGTGCTCCTCCATCAGGCTCCTCTTCTGGTGCAGGTACTGGCCTGCCCAAGGCCCTCATaGCCTTTTTGGCATTCAAAA +
Preference number: 4 (lower is better)
Translates to: QGGTVLLHQAPLLVQVLACPRPS*PFWHSK
Trigger: TTTTGAATGCCAAAAAGGCCATGAGGGCCTTGGGCA...GGCCAGTACCTGCACCAGAAGAGGAGCCTGATGGAGGAGCACGGTGCCACCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509670.1
3UTR CAA 72 bp CTTCACGAACTCTGCTTCTCGCCACGCAGTCTGAAATaGCTGCAGCAGAACTCGGGCCCGGATCTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: LHELCFSPRSLK*LQQNSGPDLGE
Trigger: CTCCCCAAGATCCGGGCCCGAGTTCTGCTGCAGCAATTTCAGACTGCGTGGCGAGAAGCAGAGTTCGTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR TCA 90 bp TGTGCCTCCATCCGCTGCACTCTCTCCCGCAGCAATTCACCTCGAACCTTTTCCAGAGGAGGAAGGCAATaGAGAACCCTGCTGCGTGGA +
Preference number: 4 (lower is better)
Translates to: CASIRCTLSRSNSPRTFSRGGRQ*RTLLRG
Trigger: TCCACGCAGCAGGGTTCTTCATTGCCTTCCTCCTCT...GGAAAAGGTTCGAGGTGAATTGCTGCGGGAGAGAGTGCAGCGGATGGAGGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR TCA 90 bp CCAAGTCATCCTCGTCATGAGGGCCATGACATTGTGTCAGCGCAGTGTGCCCACATTCACGCCATCAGCTaGGGTGAACGGCAAGGGTTC +
Preference number: 4 (lower is better)
Translates to: PSHPRHEGHDIVSAQCAHIHAIS*GERQGF
Trigger: GAACCCTTGCCGTTCACCTCAGCTGATGGCGTGAAT...GTGGGCACACTGCGCTGACACAATGTCATGGCCCTCATGACGAGGATGACTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR TCA 90 bp CTCGCCACGCAGTCTGAAATTGCTGCAGCAGAACTCGGGCCCGGATCTTGGGGAACAGCCAGCTGTCTGTaGGCTTTGGCAAAGTCTTCT +
Preference number: 4 (lower is better)
Translates to: LATQSEIAAAELGPGSWGTASCL*ALAKSS
Trigger: AGAAGACTTTGCCAAAGCTCACAGACAGCTGGCTGT...TCCCCAAGATCCGGGCCCGAGTTCTGCTGCAGCAATTTCAGACTGCGTGGCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR TCA 90 bp GGTCAGTTGTCAGGATTGGCTCCTCCAAGTCATCCTCGTCATGAGGGCCATGACCCTCCTGCCTCATCCTaGGCAGCTCCTCTTCAGACA +
Preference number: 4 (lower is better)
Translates to: GQLSGLAPPSHPRHEGHDPPASS*AAPLQT
Trigger: TGTCTGAAGAGGAGCTGCTCAGGATGAGGCAGGAGG...GTCATGGCCCTCATGACGAGGATGACTTGGAGGAGCCAATCCTGACAACTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR TCA 90 bp CATGAGGGCCATGACATTGTGTCAGCGCAGTGTGCCCACAGCTGGGCTCATAGGTCTCGCCACGCAGTCTaGAATTGCTGCAGCAGAACT +
Preference number: 4 (lower is better)
Translates to: HEGHDIVSAQCAHSWAHRSRHAV*NCCSRT
Trigger: AGTTCTGCTGCAGCAATTTCAGACTGCGTGGCGAGA...CCTATGAGCCCAGCTGTGGGCACACTGCGCTGACACAATGTCATGGCCCTCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp CTCCCAGGCCCTTCCTTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAGACAGGGATTTGCTTTaGCAAGGGACGCAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: LPGPSLVFQGHITQTEAPDRDLL*QGTQEE
Trigger: CTCCTCCTGCGTCCCTTGGCAAAGCAAATCCCTGTC...TGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAAGGAAGGGCCTGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp AAACCGAGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTTATGCGGGCTGTCTGTaGTTCACTCGACCCAGACAC +
Preference number: 4 (lower is better)
Translates to: KPSPCKLACATGSVPSACYAGCL*FTRPRH
Trigger: GTGTCTGGGTCGAGTGAAGCACAGACAGCCCGCATA...ACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp CCTTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTGCAGCCTGGAGCGTGGCTaGGTAGCTGACAGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: PWCSRAILRKQRLQRLHCSLERG*VADSKG
Trigger: GCCTTTGCTGTCAGCTACGCAGCCACGCTCCAGGCT...GCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp AGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTGGCAATGAAGAACCCTaGTGCGTGGAGGCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: RESGCHHTDHSFCSRGWGGNEEP*CVEAVV
Trigger: CACCACGGCCTCCACGCAGCAGGGTTCTTCATTGCC...ACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp CCGAGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCAAGCTTGCTCTCATACTaGCAAACCCGATGTCTGGTG +
Preference number: 4 (lower is better)
Translates to: PSPCKLACATGSVPSACASLLSY*QTRCLV
Trigger: CACCAGACATCGGGTTTGGCAGTATGAGAGCAAGCT...TGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp AAACCGAGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTCTAAGGCTTGAAGCATaGTCCCAGGGTCCTCGGAAG +
Preference number: 4 (lower is better)
Translates to: KPSPCKLACATGSVPSACLRLEA*SQGPRK
Trigger: CTTCCGAGGACCCTGGGAGCATGCTTCAAGCCTTAG...ACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp CATGAGGGCCATGACATTGTGTCAGCGCAGTGTGCCCACAGCTGGGCTCATAGGAGAGACTTCCTCAAGTaGTCCTGTTCCAGGCCATGG +
Preference number: 4 (lower is better)
Translates to: HEGHDIVSAQCAHSWAHRRDFLK*SCSRPW
Trigger: CCATGGCCTGGAACAGGAGCACTTGAGGAAGTCTCT...CCTATGAGCCCAGCTGTGGGCACACTGCGCTGACACAATGTCATGGCCCTCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp AGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCAATTGTGCTCAGAAGGCCCTaGACACGGGTCTCTGATGAC +
Preference number: 4 (lower is better)
Translates to: SPCKLACATGSVPSACAIVLRRP*TRVSDD
Trigger: GTCATCAGAGACCCGTGTGCAGGGCCTTCTGAGCAC...AATTGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp GGTCAGTTGTCAGGATTGGCTCCTCCAAGTCATCCTCGTCATGAGGGCCATGACGTGCTCAGAAGGCCCTaGACACGGGTCTCTGATGAC +
Preference number: 4 (lower is better)
Translates to: GQLSGLAPPSHPRHEGHDVLRRP*TRVSDD
Trigger: GTCATCAGAGACCCGTGTGCAGGGCCTTCTGAGCAC...GTCATGGCCCTCATGACGAGGATGACTTGGAGGAGCCAATCCTGACAACTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp TGGGGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGATCGCCGACGGACGCCTaGTCCCTACGCTGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: WGGGAERRSVYVLVIWKRSPTDA*SLRCSL
Trigger: CAGGGAGCAGCGTAGGGAGCAGGCGTCCGTCGGCGA...TCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp CAGAGGCTCCAACGATTGCACTGCTCAGTCCGAGGTAACTCATCTATGTTTGGGGTCATGGCTGAGTTCTaGAGGCGCCGCAGCTCGTCG +
Preference number: 4 (lower is better)
Translates to: QRLQRLHCSVRGNSSMFGVMAEF*RRRSSS
Trigger: CGACGAGCTGCGGCGCCTGCAGAACTCAGCCATGAC...CCCAAACATAGATGAGTTACCTCGGACTGAGCAGTGCAATCGTTGGAGCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp GGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGTCCTCCCCCTCCAGCTaGTCGGCCCGTGCAGCCATC +
Preference number: 4 (lower is better)
Translates to: GGGAERRSVYVLVIWKRVSSPSS*SARAAI
Trigger: GATGGCTGCACGGGCCGAGCAGCTGGAGGGGGAGGA...CACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp GTGCGACTCCAGGATCTGTGTGCAGGCCGACTTGGTCAGCATCTCAGATGCACTTCATCCTTCAGTCTCTaGCTCACGCTCTGGACACCC +
Preference number: 4 (lower is better)
Translates to: VRLQDLCAGRLGQHLRCTSSFSL*LTLWTP
Trigger: GGGTGTCCAGAGCGTGAGGCAGAGACTGAAGGATGA...AGTGCATCTGAGATGCTGACCAAGTCGGCCTGCACACAGATCCTGGAGTCGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp TGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTGCTCACGTCGCAGCTCTGCCTaGTCCTCTGTCACGGCCTCA +
Preference number: 4 (lower is better)
Translates to: WCSRAILRKQRLQRLHCSRRSSA*SSVTAS
Trigger: TGAGGCCGTGACAGAGGAGCAGGCAGAGCTGCGACG...TGAGCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp GAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTGTGAAAGCCTCCCTCCTGTaGCTCCATCCGCTGCACTCT +
Preference number: 4 (lower is better)
Translates to: ESGCHHTDHSFCSRGWGVKASLL*LHPLHS
Trigger: AGAGTGCAGCGGATGGAGGCACAGGAGGGAGGCTTT...CACACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp AAACCGAGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTAGCAACAAGCGACTGTaGAAAGCCTCCCTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: KPSPCKLACATGSVPSACSNKRL*KASLLC
Trigger: GCACAGGAGGGAGGCTTTGCACAGTCGCTTGTTGCT...ACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp TTCCTTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTTGGGCTGCCTCCTGCTaGACCAGCTGGTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: FLGVPGPYYANRGSNDCTWAASC*TSWSSS
Trigger: GCTGGAGGACCAGCTGGTGCAGCAGGAGGCAGCCCA...AGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp GTCACCCGGGACGCCTTCTGGAACTGCAGAGCAACAAGCGACTGTGCAAAGCCTCCTTCTCTCTTCAGATaGTCCCGCAGGTCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: VTRDAFWNCRATSDCAKPPSLFR*SRRSFP
Trigger: AGGGAAAGACCTGCGGGAGCATCTGAAGAGAGAAGG...AGGCTTTGCACAGTCGCTTGTTGCTCTGCAGTTCCAGAAGGCGTCCCGGGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp AGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTCCCTGCAAGTTGGCATaGGCTACGGGGTCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: RESGCHHTDHSFCSRGWGPCKLA*ATGSVP
Trigger: AGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGG...ACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp CGTCATGAGGGCCATGACATTGTGTCAGCGCAGTGTGCCCACAGCTGGGCTCATAGAGGCTCCAACGATTaGACTGCTCAGTCCGAGGTA +
Preference number: 4 (lower is better)
Translates to: RHEGHDIVSAQCAHSWAHRGSND*TAQSEV
Trigger: TACCTCGGACTGAGCAGTGCAATCGTTGGAGCCTCT...ATGAGCCCAGCTGTGGGCACACTGCGCTGACACAATGTCATGGCCCTCATGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CCA 90 bp TGGCTGCACAGGGTTGCAAAGGTGTCTGCCTCCATGTTTTCCAACAAGTCTTCTCGGGGCCGGGAGTCCTaGAGCACCCAGAAGGTTCAG +
Preference number: 4 (lower is better)
Translates to: WLHRVAKVSASMFSNKSSRGRES*STQKVQ
Trigger: CTGAACCTTCTGGGTGCTCCAGGACTCCCGGCCCCG...AGAAGACTTGTTGGAAAACATGGAGGCAGACACCTTTGCAACCCTGTGCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CCA 90 bp CGACTTGGTCAGCATCTCAGATGCACTCAGCTCTTCCAGGAGCAAGTCCTGGATAAACGGAGAAGCATTTaGAGCGCGGGGCCGGGAGTC +
Preference number: 4 (lower is better)
Translates to: RLGQHLRCTQLFQEQVLDKRRSI*SAGPGV
Trigger: GACTCCCGGCCCCGCGCTCCAAATGCTTCTCCGTTT...ATCCAGGACTTGCTCCTGGAAGAGCTGAGTGCATCTGAGATGCTGACCAAGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CCA 90 bp AGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCAATTGCAGCTCCGAGAGGTTaGCTGACGAGGTTGTCTTGG +
Preference number: 4 (lower is better)
Translates to: SPCKLACATGSVPSACAIAAPRG*LTRLSW
Trigger: CCAAGACAACCTCGTCAGCCAACCTCTCGGAGCTGC...AATTGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp GGATTGGCTCCTCCAAGTCATCCTCGTCATGAGGGCCATGACATTGTGTCAGCGGCAGCTCCGAGAGGTTaGCTGACGAGGTTGTCTTGG +
Preference number: 4 (lower is better)
Translates to: GLAPPSHPRHEGHDIVSAAAPRG*LTRLSW
Trigger: CCAAGACAACCTCGTCAGCCAACCTCTCGGAGCTGC...CGCTGACACAATGTCATGGCCCTCATGACGAGGATGACTTGGAGGAGCCAATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CCA 90 bp AGGCCGACTTGGTCAGCATCTCAGATGCACTCAGCTCTTCCAGGAGCAAGTCCTGCAGCTCCGAGAGGTTaGCTGACGAGGTTGTCTTGG +
Preference number: 4 (lower is better)
Translates to: RPTWSASQMHSALPGASPAAPRG*LTRLSW
Trigger: CCAAGACAACCTCGTCAGCCAACCTCTCGGAGCTGC...AGGACTTGCTCCTGGAAGAGCTGAGTGCATCTGAGATGCTGACCAAGTCGGCCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CCA 90 bp CAGAGGCTCCAACGATTGCACTGCTCAGTCCGAGGTAACTCATCTATGTTTGGGAAGAACCCTGCTGCGTaGAGGCCGTGGTGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: QRLQRLHCSVRGNSSMFGKNPAA*RPWCGR
Trigger: TCTGCCGCACCACGGCCTCCACGCAGCAGGGTTCTT...CCCAAACATAGATGAGTTACCTCGGACTGAGCAGTGCAATCGTTGGAGCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CCA 90 bp CTGGCTCTTGCTCAGGGCTTGGTGCAGGACAGTAGAGACCTGCCTTTCAGAATCTCCTGTTCCAGGCCATaGAGGGTCCGCAGAAGGTTG +
Preference number: 4 (lower is better)
Translates to: LALAQGLVQDSRDLPFRISCSRP*RVRRRL
Trigger: CAACCTTCTGCGGACCCTCCATGGCCTGGAACAGGA...GATTCTGAAAGGCAGGTCTCTACTGTCCTGCACCAAGCCCTGAGCAAGAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CCA 90 bp AAACCGAGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTTTCTGGTGCAGGTACTaGCCGGCATCCTCAACCGTT +
Preference number: 4 (lower is better)
Translates to: KPSPCKLACATGSVPSACFWCRY*PASSTV
Trigger: AACGGTTGAGGATGCCGGCCAGTACCTGCACCAGAA...ACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp TGCTCCTCTGTCACGGCCTCAGGAGCGTCATCCTTCAGTCTCTGCCTCACGCTCGTGACTTTCTCACCTTaGACTGTTGCTGCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: CSSVTASGASSFSLCLTLVTFSP*TVAAAQ
Trigger: CTGAGCTGCAGCAACAGTCCAAGGTGAGAAAGTCAC...GAGCGTGAGGCAGAGACTGAAGGATGACGCTCCTGAGGCCGTGACAGAGGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CCA 90 bp CCTTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTGCTTCCTCTCCAACTCCTaGAGCTCCCGGCTGTGCGAC +
Preference number: 4 (lower is better)
Translates to: PWCSRAILRKQRLQRLHCFLSNS*SSRLCD
Trigger: GTCGCACAGCCGGGAGCTCCAGGAGTTGGAGAGGAA...GCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CCA 90 bp AGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTTCCTGCTGCACCAGCTaGTCCTCCAGCTTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: RESGCHHTDHSFCSRGWGSCCTS*SSSFLS
Trigger: GGAGAGGAAGCTGGAGGACCAGCTGGTGCAGCAGGA...ACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp AGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCAATTGCCAGTCTCAGCTCCTaGCTGCACAGGGTTGCAAAG +
Preference number: 4 (lower is better)
Translates to: SPCKLACATGSVPSACAIASLSS*LHRVAK
Trigger: CTTTGCAACCCTGTGCAGCCAGGAGCTGAGACTGGC...AATTGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp GGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGTGGCCCCGGGCACCATaGCCATCCTCGCCAGGTACG +
Preference number: 4 (lower is better)
Translates to: GGGAERRSVYVLVIWKRVWPRAP*PSSPGT
Trigger: CGTACCTGGCGAGGATGGCCATGGTGCCCGGGGCCA...CACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp TTGTCAGGATTGGCTCCTCCAAGTCATCCTCGTCATGAGGGCCATGACATTGTGGCTTGCCACCAGCTCTaGTGTTTCCTCCGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: LSGLAPPSHPRHEGHDIVACHQL*CFLRLP
Trigger: GGGCAGGCGGAGGAAACACCAGAGCTGGTGGCAAGC...CACAATGTCATGGCCCTCATGACGAGGATGACTTGGAGGAGCCAATCCTGACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CCA 90 bp AGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTGGGCCAGTTCGCCAATaGGCTCCAGTGACAGGTGTG +
Preference number: 4 (lower is better)
Translates to: RESGCHHTDHSFCSRGWGGPVRQ*APVTGV
Trigger: CACACCTGTCACTGGAGCCCATTGGCGAACTGGCCC...ACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp AAACCGAGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTTTTCTGCCCCTACAATaGGTACAGGGGCCAGTTCGC +
Preference number: 4 (lower is better)
Translates to: KPSPCKLACATGSVPSACFLPLQ*VQGPVR
Trigger: GCGAACTGGCCCCTGTACCCATTGTAGGGGCAGAAA...ACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
3UTR CAA 72 bp CTCCTCCAAGTCATCCTCGTCATGAGGGCCATGACATaGTGTCAGCGCAGTGTGCCCACAGCTGGGCTCATA +
Preference number: 4 (lower is better)
Translates to: LLQVILVMRAMT*CQRSVPTAGLI
Trigger: TATGAGCCCAGCTGTGGGCACACTGCGCTGACACAATGTCATGGCCCTCATGACGAGGATGACTTGGAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR TCA 90 bp TTCCTTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTACAGCTGACACCTGTTaGCGGGGGAGGGCTCCACTC +
Preference number: 4 (lower is better)
Translates to: FLGVPGPYYANRGSNDCTTADTC*RGRAPL
Trigger: GAGTGGAGCCCTCCCCCGTCAACAGGTGTCAGCTGT...AGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR TCA 90 bp TTCCTTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTGTCCTGGGTGACAGCTaGCACCTGTTGACGGGGGAG +
Preference number: 4 (lower is better)
Translates to: FLGVPGPYYANRGSNDCTVLGDS*HLLTGE
Trigger: CTCCCCCGTCAACAGGTGTCAGCTGTCACCCAGGAC...AGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR TCA 90 bp AAACCGAGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTCCTGACACACGGATGTaGATCCAGAGTTTCCCCATC +
Preference number: 4 (lower is better)
Translates to: KPSPCKLACATGSVPSACPDTRM*IQSFPI
Trigger: GATGGGGAAACTCTGGATTCACATCCGTGTGTCAGG...ACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310917.6
CDS-3UTR TCA 90 bp CCGGATCTTGGGGAGGGCCAAGCTCCTGTCCATCTGAGCAAAGCAGCCATGGACACTGCAGTCTTAAAGTaGCAGCATTCCACTTTGGGC +
Preference number: 4 (lower is better)
Translates to: PDLGEGQAPVHLSKAAMDTAVLK*QHSTLG
Trigger: GCCCAAAGTGGAATGCTGTCACTTTAAGACTGCAGT...GTCCATGGCTGCTTTGCTCAGATGGACAGGAGCTTGGCCCTCCCCAAGATCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR TCA 90 bp GAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTGTGCTCCGAGAGGTTGGCTaGCGAGGTTGTCTTGGTGTT +
Preference number: 4 (lower is better)
Translates to: ESGCHHTDHSFCSRGWGVLREVG*RGCLGV
Trigger: AACACCAAGACAACCTCGTCAGCCAACCTCTCGGAG...CACACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp GAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTGTGTTCCGTGACGAGCTCTaGAAGGTGAGTTGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: ESGCHHTDHSFCSRGWGVFRDEL*KVSWAG
Trigger: TCCTGCCCAACTCACCTTTCAGAGCTCGTCACGGAA...CACACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp GAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTGTGATTCACGCCATCAGCTaGGGTGAACGGCAAGGGTTC +
Preference number: 4 (lower is better)
Translates to: ESGCHHTDHSFCSRGWGVIHAIS*GERQGF
Trigger: GAACCCTTGCCGTTCACCTCAGCTGATGGCGTGAAT...CACACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp GATTGCACTGCTCAGTCCGAGGTAACTCATCTATGTTTGGGACAAACTTGCAGGCTCCTGGGTCATGGCTaGGTTCTGCAGGCGCCGCAG +
Preference number: 4 (lower is better)
Translates to: DCTAQSEVTHLCLGQTCRLLGHG*VLQAPQ
Trigger: CTGCGGCGCCTGCAGAACTCAGCCATGACCCAGGAG...CCTGCAAGTTTGTCCCAAACATAGATGAGTTACCTCGGACTGAGCAGTGCAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR TCA 90 bp GTGTGGCCAACTTCCTTTTCCAGAGAATATCATCCTCTCTCTGAGAGGGAGACACTCCTGGGTCATGGCTaGGTTCTGCAGGCGCCGCAG +
Preference number: 4 (lower is better)
Translates to: VWPTSFSREYHPLSERETLLGHG*VLQAPQ
Trigger: CTGCGGCGCCTGCAGAACTCAGCCATGACCCAGGAG...TGTCTCCCTCTCAGAGAGAGGATGATATTCTCTGGAAAAGGAAGTTGGCCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR TCA 90 bp AGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCAATTAGGAGCAGAGCTTCATaGAGATCAGGTGCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: SPCKLACATGSVPSACAIRSRAS*RSGAPS
Trigger: GCTGGGAGCACCTGATCTTCATGAAGCTCTGCTCCT...AATTGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp AGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCAATTAAGCTCCTGTCCATCTaGGCAAAGCAGCCATGGACC +
Preference number: 4 (lower is better)
Translates to: SPCKLACATGSVPSACAIKLLSI*AKQPWT
Trigger: GGTCCATGGCTGCTTTGCTCAGATGGACAGGAGCTT...AATTGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp AGGCGCCGCAGCTCGTCGGTGGCCTTTTCAAACAGCGAAAGGGTCAGGGTCCTGTGTTCCTCACAGAGGTaGATTTTGTCTTCGATGCAC +
Preference number: 4 (lower is better)
Translates to: RRRSSSVAFSNSERVRVLCSSQR*ILSSMH
Trigger: GTGCATCGAAGACAAAATTCACCTCTGTGAGGAACA...CAGGACCCTGACCCTTTCGCTGTTTGAAAAGGCCACCGACGAGCTGCGGCGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR TCA 90 bp CCGAGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCAGTGTTTATGTCCTTGTaGTATGGAAGAGAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: PSPCKLACATGSVPSACAVFMSL*YGREWA
Trigger: GGCCCACTCTCTTCCATATCACAAGGACATAAACAC...TGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp CTGGTGCAGGTACTGGCCGGCATCCTCAACCGTTCGGAAGGCCTCGCCGACGGATTTCATTCCAAGTGGTaGTTCCACTGCAGTCTTAAA +
Preference number: 4 (lower is better)
Translates to: LVQVLAGILNRSEGLADGFHSKW*FHCSLK
Trigger: TTTAAGACTGCAGTGGAAGCACCACTTGGAATGAAA...TCCGTCGGCGAGGCCTTCCGAACGGTTGAGGATGCCGGCCAGTACCTGCACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp GCTCCTCCAAGTCATCCTCGTCATGAGGGCCATGACATTGTGTCAGCGCAGTGTTATGCGGGCTGTCTGTaGTTCACTCGACCCAGACAC +
Preference number: 4 (lower is better)
Translates to: APPSHPRHEGHDIVSAQCYAGCL*FTRPRH
Trigger: GTGTCTGGGTCGAGTGAAGCACAGACAGCCCGCATA...ACACTGCGCTGACACAATGTCATGGCCCTCATGACGAGGATGACTTGGAGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp CTGGTCCAGCTTCACGAACTCTGCTTCTCGCCACGCAGTCTGAAATTGCTGCAGCTAAGGCTTGAAGCATaGTCCCAGGGTCCTCGGAAG +
Preference number: 4 (lower is better)
Translates to: LVQLHELCFSPRSLKLLQLRLEA*SQGPRK
Trigger: CTTCCGAGGACCCTGGGAGCATGCTTCAAGCCTTAG...CTGCAGCAATTTCAGACTGCGTGGCGAGAAGCAGAGTTCGTGAAGCTGGACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp GTAGGCCGACAGAGTCTCGGTCACCCGGGACGCCTTCTGGAACTGCAGAGCAACACATTCAGCTGTCAATaGCACCATCTTCCGATCGTA +
Preference number: 4 (lower is better)
Translates to: VGRQSLGHPGRLLELQSNTFSCQ*HHLPIV
Trigger: TACGATCGGAAGATGGTGGCATTGACAGCTGAATGT...GTTGCTCTGCAGTTCCAGAAGGCGTCCCGGGTGACCGAGACTCTGTCGGCCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp AGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTGTGCTCAGAAGGCCCTaGACACGGGTCTCTGATGAC +
Preference number: 4 (lower is better)
Translates to: RESGCHHTDHSFCSRGWGVLRRP*TRVSDD
Trigger: GTCATCAGAGACCCGTGTGCAGGGCCTTCTGAGCAC...ACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp CCATATTACGCAAACAGAGGCTCCAACGATTGCACTGCTCAGTCCGAGGTAACTGTGAGTCAGCTGGGCTaGAGCGGTGCTCAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: PYYANRGSNDCTAQSEVTVSQLG*SGAQKA
Trigger: GGCCTTCTGAGCACCGCTGCAGCCCAGCTGACTCAC...AGTTACCTCGGACTGAGCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp CGACTTGGTCAGCATCTCAGATGCACTCAGCTCTTCCAGGAGCAAGTCCTGGATGCCTGCTCCCTACGCTaGTCCCTGTGCTTTTGTAGC +
Preference number: 4 (lower is better)
Translates to: RLGQHLRCTQLFQEQVLDACSLR*SLCFCS
Trigger: GCTACAAAAGCACAGGGAGCAGCGTAGGGAGCAGGC...ATCCAGGACTTGCTCCTGGAAGAGCTGAGTGCATCTGAGATGCTGACCAAGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp CAGAGGCTCCAACGATTGCACTGCTCAGTCCGAGGTAACTCATCTATGTTTGGGAGGCTCCTCTTCTGGTaGAGGTACTGGCCGGCATCC +
Preference number: 4 (lower is better)
Translates to: QRLQRLHCSVRGNSSMFGRLLFW*RYWPAS
Trigger: GGATGCCGGCCAGTACCTGCACCAGAAGAGGAGCCT...CCCAAACATAGATGAGTTACCTCGGACTGAGCAGTGCAATCGTTGGAGCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp AGGCTCCAACGATTGCACTGCTCAGTCCGAGGTAACTCATCTATGTTTGGGACATCCAGGGTGGCACCGTaGTCCTCCATCAGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: RLQRLHCSVRGNSSMFGTSRVAP*SSIRLL
Trigger: GAGGAGCCTGATGGAGGAGCACGGTGCCACCCTGGA...TGTCCCAAACATAGATGAGTTACCTCGGACTGAGCAGTGCAATCGTTGGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp CTTCCTTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACGCCATCTCCTTGCCGTaGTCCTCCAGGATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LPWCSRAILRKQRLQRLHAISLP*SSRICC
Trigger: GCAGCAGATCCTGGAGGAGCACGGCAAGGAGATGGC...GTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAAGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp TGGGGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGACAGCTGCTCGGCCCGTaGAGCCATCTCCTTGCCGTG +
Preference number: 4 (lower is better)
Translates to: WGGGAERRSVYVLVIWKRQLLGP*SHLLAV
Trigger: CACGGCAAGGAGATGGCTGCACGGGCCGAGCAGCTG...TCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp GAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTGTGCAGCTTCACGAACTCTaGTTCTCGCCACGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: ESGCHHTDHSFCSRGWGVQLHEL*FSPRSL
Trigger: CAGACTGCGTGGCGAGAAGCAGAGTTCGTGAAGCTG...CACACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp CAGTTGTCAGGATTGGCTCCTCCAAGTCATCCTCGTCATGAGGGCCATGACATTTGGAGCTCCCGGCTGTaGGACTCCAGGATCTGTGTG +
Preference number: 4 (lower is better)
Translates to: QLSGLAPPSHPRHEGHDIWSSRL*DSRICV
Trigger: CACACAGATCCTGGAGTCGCACAGCCGGGAGCTCCA...AATGTCATGGCCCTCATGACGAGGATGACTTGGAGGAGCCAATCCTGACAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp CCGTGCTCCTCCATCAGGCTCCTCTTCTGGTGCAGGTACTGGCCGGCATCCTCAGGTTGCAAAGGTGTCTaGCTCCATGTTTTCCAACAA +
Preference number: 4 (lower is better)
Translates to: PCSSIRLLFWCRYWPASSGCKGV*LHVFQQ
Trigger: TTGTTGGAAAACATGGAGGCAGACACCTTTGCAACC...TGAGGATGCCGGCCAGTACCTGCACCAGAAGAGGAGCCTGATGGAGGAGCACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp AGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCAATTCTGGCTGCACAGGGTTaGAAAGGTGTCTGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: SPCKLACATGSVPSACAILAAQG*KGVCLH
Trigger: ATGGAGGCAGACACCTTTGCAACCCTGTGCAGCCAG...AATTGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp TCAGGATTGGCTCCTCCAAGTCATCCTCGTCATGAGGGCCATGACATTGTGTCACCTCGCCAGGTACGATaGCAGTCTCAGCTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: SGLAPPSHPRHEGHDIVSPRQVR*QSQLLA
Trigger: AGCCAGGAGCTGAGACTGGCATCGTACCTGGCGAGG...TGACACAATGTCATGGCCCTCATGACGAGGATGACTTGGAGGAGCCAATCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp AGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTGCCATCGCTCTCAGCTaGGTGGTCCACATGTCTCTC +
Preference number: 4 (lower is better)
Translates to: RESGCHHTDHSFCSRGWGAIALS*VVHMSL
Trigger: GAGAGACATGTGGACCACGCAGCTGAGAGCGATGGC...ACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp GAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTGTGTTCCTGGGAGGAACGTaGAGTGAGATCTCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: ESGCHHTDHSFCSRGWGVFLGGT*SEISGS
Trigger: GGAGCCAGAGATCTCACTGCACGTTCCTCCCAGGAA...CACACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp AAACCGAGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCGCTACGGGGTCTGTaGCTTCTGCATGTGCAATTT +
Preference number: 4 (lower is better)
Translates to: KPSPCKLACATGSVPSACALRGL*LLHVQF
Trigger: AAATTGCACATGCAGAAGGCACAGACCCCGTAGCGC...ACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp AGGCCGACTTGGTCAGCATCTCAGATGCACTCAGCTCTTCCAGGAGCAAGTCCTGGGTCCGCAGAAGGTTaGTGCACTCTACAGCAGACA +
Preference number: 4 (lower is better)
Translates to: RPTWSASQMHSALPGASPGSAEG*CTLQQT
Trigger: TGTCTGCTGTAGAGTGCAGCAACCTTCTGCGGACCC...AGGACTTGCTCCTGGAAGAGCTGAGTGCATCTGAGATGCTGACCAAGTCGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CCA 90 bp CAGAGGCTCCAACGATTGCACTGCTCAGTCCGAGGTAACTCATCTATGTTTGGGAAACGGAGAAGCATTTaGAGCGCGGGGCCGGGAGTC +
Preference number: 4 (lower is better)
Translates to: QRLQRLHCSVRGNSSMFGKRRSI*SAGPGV
Trigger: GACTCCCGGCCCCGCGCTCCAAATGCTTCTCCGTTT...CCCAAACATAGATGAGTTACCTCGGACTGAGCAGTGCAATCGTTGGAGCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CCA 90 bp AGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTTCCTGTTCCAGGCCATaGAGGGTCCGCAGAAGGTTG +
Preference number: 4 (lower is better)
Translates to: RESGCHHTDHSFCSRGWGSCSRP*RVRRRL
Trigger: CAACCTTCTGCGGACCCTCCATGGCCTGGAACAGGA...ACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp GGACGCCTTCTGGAACTGCAGAGCAACAAGCGACTGTGCAAAGCCTCCCTCCTGGATGACTGGAGGTTCTaGACCAGATATTCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: GRLLELQSNKRLCKASLLDDWRF*TRYSLW
Trigger: CCACAGGGAATATCTGGTCCAGAACCTCCAGTCATC...CAGGAGGGAGGCTTTGCACAGTCGCTTGTTGCTCTGCAGTTCCAGAAGGCGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CCA 90 bp CCTTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTGCATCAGGCTCCTCTTCTaGTGCAGGTACTGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: PWCSRAILRKQRLQRLHCIRLLF*CRYWPA
Trigger: TGCCGGCCAGTACCTGCACCAGAAGAGGAGCCTGAT...GCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CCA 90 bp GAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTGTGGCCGCAGCTCGTCGGTaGCCTTTTCAAACAGCGAAA +
Preference number: 4 (lower is better)
Translates to: ESGCHHTDHSFCSRGWGVAAARR*PFQTAK
Trigger: TTTCGCTGTTTGAAAAGGCCACCGACGAGCTGCGGC...CACACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp AGGCCGACTTGGTCAGCATCTCAGATGCACTCAGCTCTTCCAGGAGCAAGTCCTGCCGCAGCTCGTCGGTaGCCTTTTCAAACAGCGAAA +
Preference number: 4 (lower is better)
Translates to: RPTWSASQMHSALPGASPAAARR*PFQTAK
Trigger: TTTCGCTGTTTGAAAAGGCCACCGACGAGCTGCGGC...AGGACTTGCTCCTGGAAGAGCTGAGTGCATCTGAGATGCTGACCAAGTCGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CCA 90 bp GGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGCTCGGGCCCGGATCTTaGGGAGGGCCAAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: GGGAERRSVYVLVIWKRVLGPGS*GGPSSC
Trigger: ACAGGAGCTTGGCCCTCCCCAAGATCCGGGCCCGAG...CACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp TTCCTTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTGGGGCAGCCACGGCCTaGTCCAGCTTCACGAACTCT +
Preference number: 4 (lower is better)
Translates to: FLGVPGPYYANRGSNDCTGAATA*SSFTNS
Trigger: AGAGTTCGTGAAGCTGGACCAGGCCGTGGCTGCCCC...AGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CCA 90 bp GTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTGCTCAGTCCACCCGGGACGCCTTCTaGAACTGCAGAGCAACAAGC +
Preference number: 4 (lower is better)
Translates to: VPGPYYANRGSNDCTAQSTRDAF*NCRATS
Trigger: GCTTGTTGCTCTGCAGTTCCAGAAGGCGTCCCGGGT...GGACTGAGCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CCA 90 bp GGATTGGCTCCTCCAAGTCATCCTCGTCATGAGGGCCATGACATTGTGTCAGCGCTCTTGCTCAGGGCTTaGTGCAGGACAGTAGAGACC +
Preference number: 4 (lower is better)
Translates to: GLAPPSHPRHEGHDIVSALLLRA*CRTVET
Trigger: GGTCTCTACTGTCCTGCACCAAGCCCTGAGCAAGAG...CGCTGACACAATGTCATGGCCCTCATGACGAGGATGACTTGGAGGAGCCAATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CCA 90 bp ATCCAGGTACCCTGCTCTCTCGTGCTTCTGAATGAGGTGAGTCAGCTGGGCTGCTGCTCCAGTAATGTCTaGCTCTTGCTCAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: IQVPCSLVLLNEVSQLGCCSSNV*LLLRAW
Trigger: CCAAGCCCTGAGCAAGAGCCAGACATTACTGGAGCA...GCAGCCCAGCTGACTCACCTCATTCAGAAGCACGAGAGAGCAGGGTACCTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CCA 90 bp GTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTGCTCAGTCCGCCAGTCTCAGCTCCTaGCTGCACAGGGTTGCAAAG +
Preference number: 4 (lower is better)
Translates to: VPGPYYANRGSNDCTAQSASLSS*LHRVAK
Trigger: CTTTGCAACCCTGTGCAGCCAGGAGCTGAGACTGGC...GGACTGAGCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CCA 90 bp CTTGCTCAGGGCTTGGTGCAGGACAGTAGAGACCTGCCTTTCAGAATCCACCTCTTTCTGCCCCTACAATaGGTACAGGGGCCAGTTCGC +
Preference number: 4 (lower is better)
Translates to: LAQGLVQDSRDLPFRIHLFLPLQ*VQGPVR
Trigger: GCGAACTGGCCCCTGTACCCATTGTAGGGGCAGAAA...GAGGTGGATTCTGAAAGGCAGGTCTCTACTGTCCTGCACCAAGCCCTGAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR TCA 90 bp CTCCCAGGCCCTTCCTTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCACCCTTGAACTTCTCTTaGAATGTCCCCATACAGGCG +
Preference number: 4 (lower is better)
Translates to: LPGPSLVFQGHITQTEAPPLNFS*NVPIQA
Trigger: CGCCTGTATGGGGACATTTCAAGAGAAGTTCAAGGG...TGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAAGGAAGGGCCTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR TCA 90 bp AGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTTTCCGTGACGAGCTCTaGAAGGTGAGTTGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: RESGCHHTDHSFCSRGWGFRDEL*KVSWAG
Trigger: TCCTGCCCAACTCACCTTTCAGAGCTCGTCACGGAA...ACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp CTTGCTCAGGGCTTGGTGCAGGACAGTAGAGACCTGCCTTTCAGAATCCACCTCAACTCTTCTAAGGCTTaGAGCATGCTCCCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: LAQGLVQDSRDLPFRIHLNSSKA*SMLPGS
Trigger: GGACCCTGGGAGCATGCTTCAAGCCTTAGAAGAGTT...GAGGTGGATTCTGAAAGGCAGGTCTCTACTGTCCTGCACCAAGCCCTGAGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR TCA 90 bp CGATTGCACTGCTCAGTCCGAGGTAACTCATCTATGTTTGGGACAAACTTGCAGAAAGGGTCAGGGTCCTaGGATCGTCCAGGGCGGCCT +
Preference number: 4 (lower is better)
Translates to: RLHCSVRGNSSMFGTNLQKGSGS*DRPGRP
Trigger: AGGCCGCCCTGGACGATCTCAGGACCCTGACCCTTT...CTGCAAGTTTGTCCCAAACATAGATGAGTTACCTCGGACTGAGCAGTGCAATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR TCA 90 bp GGCCATCTGGAAATTCATGAGACAAGATTAAACCGAGTCCCTGCAAGTTGGCATCTCCTGGGTCATGGCTaGGTTCTGCAGGCGCCGCAG +
Preference number: 4 (lower is better)
Translates to: GHLEIHETRLNRVPASWHLLGHG*VLQAPQ
Trigger: CTGCGGCGCCTGCAGAACTCAGCCATGACCCAGGAG...ATGCCAACTTGCAGGGACTCGGTTTAATCTTGTCTCATGAATTTCCAGATGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp TGCTTATCAGATCTCCTCGCAGTTTGCCATCTAAGGCTTGCCACCAGCTCTGGTCCTCCTGCCTCATCCTaGGCAGCTCCTCTTCAGACA +
Preference number: 4 (lower is better)
Translates to: CLSDLLAVCHLRLATSSGPPASS*AAPLQT
Trigger: TGTCTGAAGAGGAGCTGCTCAGGATGAGGCAGGAGG...ACCAGAGCTGGTGGCAAGCCTTAGATGGCAAACTGCGAGGAGATCTGATAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR TCA 90 bp AGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCAATTTCTCGCCACGCAGTCTaGAATTGCTGCAGCAGAACT +
Preference number: 4 (lower is better)
Translates to: SPCKLACATGSVPSACAISRHAV*NCCSRT
Trigger: AGTTCTGCTGCAGCAATTTCAGACTGCGTGGCGAGA...AATTGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp GTTGTGCATTATAAACACACAAACACCGGCGGGCAGGAGAAAATCATCCCTTCTGCAAGTCCTGGATGCTaGGGAGGGCGGTGTAGGCCG +
Preference number: 4 (lower is better)
Translates to: VVHYKHTNTGGQEKIIPSASPGC*GGRCRP
Trigger: CGGCCTACACCGCCCTCCTCAGCATCCAGGACTTGC...AGAAGGGATGATTTTCTCCTGCCCGCCGGTGTTTGTGTGTTTATAATGCACAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp CTCGCCACGCAGTCTGAAATTGCTGCAGCAGAACTCGGGCCCGGATCTTGGGGATCTCTCAAACACTGCTaGTGTTGCTCCAGTAATGTC +
Preference number: 4 (lower is better)
Translates to: LATQSEIAAAELGPGSWGSLKHC*CCSSNV
Trigger: GACATTACTGGAGCAACATCAGCAGTGTTTGAGAGA...TCCCCAAGATCCGGGCCCGAGTTCTGCTGCAGCAATTTCAGACTGCGTGGCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR TCA 90 bp TGGCTGCACAGGGTTGCAAAGGTGTCTGCCTCCATGTTTTCCAACAAGTCTTCTGCCAATGGGCTCCAGTaGCAGGTGTGGCCAACTTCC +
Preference number: 4 (lower is better)
Translates to: WLHRVAKVSASMFSNKSSANGLQ*QVWPTS
Trigger: GGAAGTTGGCCACACCTGTCACTGGAGCCCATTGGC...AGAAGACTTGTTGGAAAACATGGAGGCAGACACCTTTGCAACCCTGTGCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR TCA 90 bp GTAACAAATACAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATGCGCCAGCGGGGACGTaGGCTGGCGCCGAGACAGCC +
Preference number: 4 (lower is better)
Translates to: VTNTKHKSRESGCHHTDHAPAGT*AGAETA
Trigger: GGCTGTCTCGGCGCCAGCTCACGTCCCCGCTGGCGC...ATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTGTATTTGTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344408.10
CDS-3UTR TCA 90 bp TGGCTGCACAGGGTTGCAAAGGTGTCTGCCTCCATGTTTTCCAACAAGTCTTCTGAAGCTTTCTGGCCGTaGGCGGGATACACCTGGGTC +
Preference number: 4 (lower is better)
Translates to: WLHRVAKVSASMFSNKSSEAFWP*AGYTWV
Trigger: GACCCAGGTGTATCCCGCTCACGGCCAGAAAGCTTC...AGAAGACTTGTTGGAAAACATGGAGGCAGACACCTTTGCAACCCTGTGCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp ATATGGAAGAGAGTGGGCCATCTGGAAATTCATGAGACAAGATTAAACCGAGTCCCCACTGCCCGAGCCTaGTGTGGGTCAGCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: IWKRVGHLEIHETRLNRVPTARA*CGSALG
Trigger: GCCCAGGGCTGACCCACAGCAGGCTCGGGCAGTGGG...GACTCGGTTTAATCTTGTCTCATGAATTTCCAGATGGCCCACTCTCTTCCATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310917.6
CDS-3UTR GCA 90 bp CTTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTGCTTCCGGTTGCGTTCAGTaGAGACCAGCTGAGCACCCA +
Preference number: 4 (lower is better)
Translates to: LGVPGPYYANRGSNDCTASGCVQ*RPAEHP
Trigger: TGGGTGCTCAGCTGGTCTGCACTGAACGCAACCGGA...AGCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp GTGCGACTCCAGGATCTGTGTGCAGGCCGACTTGGTCAGCATCTCAGATGCACTAGCTTGCTCTCATACTaGCAAACCCGATGTCTGGTG +
Preference number: 4 (lower is better)
Translates to: VRLQDLCAGRLGQHLRCTSLLSY*QTRCLV
Trigger: CACCAGACATCGGGTTTGGCAGTATGAGAGCAAGCT...AGTGCATCTGAGATGCTGACCAAGTCGGCCTGCACACAGATCCTGGAGTCGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp CCGAGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCAACATTCAGCTGTCAATaGCACCATCTTCCGATCGTA +
Preference number: 4 (lower is better)
Translates to: PSPCKLACATGSVPSACATFSCQ*HHLPIV
Trigger: TACGATCGGAAGATGGTGGCATTGACAGCTGAATGT...TGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp GAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTGTGTCCGCAGAAGGTTGCTaGACTCTACAGCAGACCTCT +
Preference number: 4 (lower is better)
Translates to: ESGCHHTDHSFCSRGWGVSAEGC*TLQQTS
Trigger: AGAGGTCTGCTGTAGAGTGCAGCAACCTTCTGCGGA...CACACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp CCTTCCTTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCAGGGTCCGCAGAAGGTTaGTGCACTCTACAGCAGACC +
Preference number: 4 (lower is better)
Translates to: PSLVFQGHITQTEAPTIAGSAEG*CTLQQT
Trigger: GGTCTGCTGTAGAGTGCAGCAACCTTCTGCGGACCC...TGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAAGGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp GGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGGTCATGGCTGAGTTCTaGAGGCGCCGCAGCTCGTCG +
Preference number: 4 (lower is better)
Translates to: GGGAERRSVYVLVIWKRVVMAEF*RRRSSS
Trigger: CGACGAGCTGCGGCGCCTGCAGAACTCAGCCATGAC...CACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp GTTGTGCATTATAAACACACAAACACCGGCGGGCAGGAGAAAATCATCCCTTCTCAGCTGCTCGGCCCGTaGAGCCATCTCCTTGCCGTG +
Preference number: 4 (lower is better)
Translates to: VVHYKHTNTGGQEKIIPSQLLGP*SHLLAV
Trigger: CACGGCAAGGAGATGGCTGCACGGGCCGAGCAGCTG...AGAAGGGATGATTTTCTCCTGCCCGCCGGTGTTTGTGTGTTTATAATGCACAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp CAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCATCCTCCCCCTCCAGCTaGTCGGCCCGTGCAGCCATC +
Preference number: 4 (lower is better)
Translates to: QNIRVENLAVTTQTIASASSPSS*SARAAI
Trigger: GATGGCTGCACGGGCCGAGCAGCTGGAGGGGGAGGA...TGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp CAACTTCCTTTTCCAGAGAATATCATCCTCTCTCTGAGAGGGAGACATGTCTTCTCCTCCCCCTCCAGCTaGTCGGCCCGTGCAGCCATC +
Preference number: 4 (lower is better)
Translates to: QLPFPENIILSLRGRHVFSSPSS*SARAAI
Trigger: GATGGCTGCACGGGCCGAGCAGCTGGAGGGGGAGGA...GAAGACATGTCTCCCTCTCAGAGAGAGGATGATATTCTCTGGAAAAGGAAGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp AGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCAATTTTCATGAAGATCAGGTaGTCCCAGCGTCGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: SPCKLACATGSVPSACAIFMKIR*SQRRSS
Trigger: AGAGCTGCGACGCTGGGAGCACCTGATCTTCATGAA...AATTGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp CGACTTGGTCAGCATCTCAGATGCACTCAGCTCTTCCAGGAGCAAGTCCTGGATCAGCTTCACGAACTCTaGTTCTCGCCACGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: RLGQHLRCTQLFQEQVLDQLHEL*FSPRSL
Trigger: CAGACTGCGTGGCGAGAAGCAGAGTTCGTGAAGCTG...ATCCAGGACTTGCTCCTGGAAGAGCTGAGTGCATCTGAGATGCTGACCAAGTCG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp CCTTCCTTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCAAAAGCCTCCCTCCTGTaGCTCCATCCGCTGCACTCT +
Preference number: 4 (lower is better)
Translates to: PSLVFQGHITQTEAPTIAKASLL*LHPLHS
Trigger: AGAGTGCAGCGGATGGAGGCACAGGAGGGAGGCTTT...TGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAAGGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp AGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTACTCCAGGATCTGTGTaGAGGCCGACTTGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: RESGCHHTDHSFCSRGWGTPGSV*RPTWSA
Trigger: TGCTGACCAAGTCGGCCTGCACACAGATCCTGGAGT...ACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp ATATGGAAGAGAGTGGGCCATCTGGAAATTCATGAGACAAGATTAAACCGAGTCCAGCTCGCCAGGGCCTaGTGCTGCTGGGCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: IWKRVGHLEIHETRLNRVQLARA*CCWAAS
Trigger: GGAGGCAGCCCAGCAGCAGCAGGCCCTGGCGAGCTG...GACTCGGTTTAATCTTGTCTCATGAATTTCCAGATGGCCCACTCTCTTCCATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp TATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATTCATGAGACAAGACCATCGGCCACCCACTaGTGCCAGCTCGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: YVLVIWKRVGHLEIHETRPSATH*CQLARA
Trigger: GGCCCTGGCGAGCTGGCAGCAGTGGGTGGCCGATGG...TCTTGTCTCATGAATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp GAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTGTGGTAATGTCTGGCTCTTaGTCAGGGCTTGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: ESGCHHTDHSFCSRGWGVVMSGS*SGLGAG
Trigger: TCCTGCACCAAGCCCTGAGCAAGAGCCAGACATTAC...CACACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp AGGCCGACTTGGTCAGCATCTCAGATGCACTCAGCTCTTCCAGGAGCAAGTCCTGTAATGTCTGGCTCTTaGTCAGGGCTTGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: RPTWSASQMHSALPGASPVMSGS*SGLGAG
Trigger: TCCTGCACCAAGCCCTGAGCAAGAGCCAGACATTAC...AGGACTTGCTCCTGGAAGAGCTGAGTGCATCTGAGATGCTGACCAAGTCGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp CCGAGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCAGGTTGCAAAGGTGTCTaGCTCCATGTTTTCCAACAA +
Preference number: 4 (lower is better)
Translates to: PSPCKLACATGSVPSACAGCKGV*LHVFQQ
Trigger: TTGTTGGAAAACATGGAGGCAGACACCTTTGCAACC...TGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp GGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTGCTCAGTCCGAGGTACTGGCTGCACAGGGTTaGAAAGGTGTCTGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: GPYYANRGSNDCTAQSEVLAAQG*KGVCLH
Trigger: ATGGAGGCAGACACCTTTGCAACCCTGTGCAGCCAG...TACCTCGGACTGAGCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp CAGTTGTCAGGATTGGCTCCTCCAAGTCATCCTCGTCATGAGGGCCATGACATTGCCATCGCTCTCAGCTaGGTGGTCCACATGTCTCTC +
Preference number: 4 (lower is better)
Translates to: QLSGLAPPSHPRHEGHDIAIALS*VVHMSL
Trigger: GAGAGACATGTGGACCACGCAGCTGAGAGCGATGGC...AATGTCATGGCCCTCATGACGAGGATGACTTGGAGGAGCCAATCCTGACAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp ATAGATCAATGGTTTCTGCCCCTACAATGGGTACAGGGGCCAGTTCGCCAATGGGCCATCGCTCTCAGCTaGGTGGTCCACATGTCTCTC +
Preference number: 4 (lower is better)
Translates to: IDQWFLPLQWVQGPVRQWAIALS*VVHMSL
Trigger: GAGAGACATGTGGACCACGCAGCTGAGAGCGATGGC...CCATTGGCGAACTGGCCCCTGTACCCATTGTAGGGGCAGAAACCATTGATCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp AGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCAATTGATCTCCTCGCAGTTTaGCATCTAAGGCTTGCCACC +
Preference number: 4 (lower is better)
Translates to: SPCKLACATGSVPSACAIDLLAV*HLRLAT
Trigger: GGTGGCAAGCCTTAGATGGCAAACTGCGAGGAGATC...AATTGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp TGCTGCAGCAGAACTCGGGCCCGGATCTTGGGGAGGGCCAAGCTCCTGTCCATCAGAATGTCTATCATTTaGTCGTTAAGGGAAAGGTCC +
Preference number: 4 (lower is better)
Translates to: CCSRTRARILGRAKLLSIRMSII*SLRERS
Trigger: GGACCTTTCCCTTAACGACCAAATGATAGACATTCT...GATGGACAGGAGCTTGGCCCTCCCCAAGATCCGGGCCCGAGTTCTGCTGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CCA 90 bp CTCCCAGGCCCTTCCTTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAGATGACTGGAGGTTCTaGACCAGATATTCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: LPGPSLVFQGHITQTEAPDDWRF*TRYSLW
Trigger: CCACAGGGAATATCTGGTCCAGAACCTCCAGTCATC...TGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAAGGAAGGGCCTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CCA 90 bp GGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGGCAGCTCCTCCAGGGTaGCACCGTGCTCCTCCATCA +
Preference number: 4 (lower is better)
Translates to: GGGAERRSVYVLVIWKRVAAPPG*HRAPPS
Trigger: TGATGGAGGAGCACGGTGCCACCCTGGAGGAGCTGC...CACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp AGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTGTGTGCAGGCCGACTTaGTCAGCATCTCAGATGCAC +
Preference number: 4 (lower is better)
Translates to: RESGCHHTDHSFCSRGWGVCRPT*SASQMH
Trigger: GTGCATCTGAGATGCTGACCAAGTCGGCCTGCACAC...ACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp CCTTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTGCGTGTGCAGGCCGACTTaGTCAGCATCTCAGATGCAC +
Preference number: 4 (lower is better)
Translates to: PWCSRAILRKQRLQRLHCVCRPT*SASQMH
Trigger: GTGCATCTGAGATGCTGACCAAGTCGGCCTGCACAC...GCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CCA 90 bp AGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTCTCTTGCTCAGGGCTTaGTGCAGGACAGTAGAGACC +
Preference number: 4 (lower is better)
Translates to: RESGCHHTDHSFCSRGWGLLLRA*CRTVET
Trigger: GGTCTCTACTGTCCTGCACCAAGCCCTGAGCAAGAG...ACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp CCGAGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCAAGTTCTTCTTTTTCCTaGGAGGAACGTGCAGTGAGA +
Preference number: 4 (lower is better)
Translates to: PSPCKLACATGSVPSACASSSFS*EERAVR
Trigger: TCTCACTGCACGTTCCTCCCAGGAAAAAGAAGAACT...TGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp AAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATAGCGGGGACGTGAGCTaGCGCCGAGACAGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: KKECLCPCDMEESGPSGNSGDVS*RRDSLG
Trigger: GCCGAGGCTGTCTCGGCGCCAGCTCACGTCCCCGCT...ATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344408.10
CDS-3UTR CCA 90 bp CCAAGTCATCCTCGTCATGAGGGCCATGACATTGTGTCAGCGCAGTGTGCCCACTGCCAGAAGCTCTCTTaGTTCCCTGACCTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: PSHPRHEGHDIVSAQCAHCQKLS*FPDLCF
Trigger: AAAGCAGAGGTCAGGGAACCAAGAGAGCTTCTGGCA...GTGGGCACACTGCGCTGACACAATGTCATGGCCCTCATGACGAGGATGACTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR TCA 90 bp CTTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTGCTTTCCGTGACGAGCTCTaGAAGGTGAGTTGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LGVPGPYYANRGSNDCTAFRDEL*KVSWAG
Trigger: TCCTGCCCAACTCACCTTTCAGAGCTCGTCACGGAA...AGCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR TCA 90 bp TTGTCAGGATTGGCTCCTCCAAGTCATCCTCGTCATGAGGGCCATGACATTGTGAGAGGAGGAAGGCAATaGAGAACCCTGCTGCGTGGA +
Preference number: 4 (lower is better)
Translates to: LSGLAPPSHPRHEGHDIVRGGRQ*RTLLRG
Trigger: TCCACGCAGCAGGGTTCTTCATTGCCTTCCTCCTCT...CACAATGTCATGGCCCTCATGACGAGGATGACTTGGAGGAGCCAATCCTGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR TCA 90 bp AGAAAATCATCCCTTCTCTCTTCAGATGCTCCCGCAGGTCTTTCCCTTGGGCTAACTGATAGCGAACCATaGGGAAGAGGGCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RKSSLLSSDAPAGLSLGLTDSEP*GRGQPR
Trigger: CCTGGGCTGCCCTCTTCCTCATGGTTCGCTATCAGT...TAGCCCAAGGGAAAGACCTGCGGGAGCATCTGAAGAGAGAAGGGATGATTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR TCA 90 bp TGCTTATCAGATCTCCTCGCAGTTTGCCATCTAAGGCTTGCCACCAGCTCTGGTATTCACGCCATCAGCTaGGGTGAACGGCAAGGGTTC +
Preference number: 4 (lower is better)
Translates to: CLSDLLAVCHLRLATSSGIHAIS*GERQGF
Trigger: GAACCCTTGCCGTTCACCTCAGCTGATGGCGTGAAT...ACCAGAGCTGGTGGCAAGCCTTAGATGGCAAACTGCGAGGAGATCTGATAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR TCA 90 bp GGTGTAGGCCGACAGAGTCTCGGTCACCCGGGACGCCTTCTGGAACTGCAGAGCAATCTTTTACTTAGATaGTACCTCTTACTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: GVGRQSLGHPGRLLELQSNLLLR*YLLLAW
Trigger: CCAGGCTAGTAAGAGGTATCATCTAAGTAAAAGATT...GCTCTGCAGTTCCAGAAGGCGTCCCGGGTGACCGAGACTCTGTCGGCCTACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR TCA 90 bp CCTTCCTTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCATCTCGTGCTTCTGAATaGGGTGAGTCAGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: PSLVFQGHITQTEAPTIASRASE*GESAGL
Trigger: CAGCCCAGCTGACTCACCTCATTCAGAAGCACGAGA...TGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAAGGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR TCA 90 bp ATAGATCAATGGTTTCTGCCCCTACAATGGGTACAGGGGCCAGTTCGCCAATGGAGGAGCAGAGCTTCATaGAGATCAGGTGCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: IDQWFLPLQWVQGPVRQWRSRAS*RSGAPS
Trigger: GCTGGGAGCACCTGATCTTCATGAAGCTCTGCTCCT...CCATTGGCGAACTGGCCCCTGTACCCATTGTAGGGGCAGAAACCATTGATCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR TCA 90 bp CGTCATGAGGGCCATGACATTGTGTCAGCGCAGTGTGCCCACAGCTGGGCTCATTGTTCCTCACAGAGGTaGATTTTGTCTTCGATGCAC +
Preference number: 4 (lower is better)
Translates to: RHEGHDIVSAQCAHSWAHCSSQR*ILSSMH
Trigger: GTGCATCGAAGACAAAATTCACCTCTGTGAGGAACA...ATGAGCCCAGCTGTGGGCACACTGCGCTGACACAATGTCATGGCCCTCATGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp TCAGGATTGGCTCCTCCAAGTCATCCTCGTCATGAGGGCCATGACATTGTGTCAACCCTCACTTCCGGTTaGGTTCAGTGCAGACCAGCT +
Preference number: 4 (lower is better)
Translates to: SGLAPPSHPRHEGHDIVSTLTSG*VQCRPA
Trigger: AGCTGGTCTGCACTGAACGCAACCGGAAGTGAGGGT...TGACACAATGTCATGGCCCTCATGACGAGGATGACTTGGAGGAGCCAATCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp TGGGGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAAGCCTGGAGCGTGGCTaGGTAGCTGACAGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: WGGGAERRSVYVLVIWKRSLERG*VADSKG
Trigger: GCCTTTGCTGTCAGCTACGCAGCCACGCTCCAGGCT...TCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp AGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCAATTAGCTTGCTCTCATACTaGCAAACCCGATGTCTGGTG +
Preference number: 4 (lower is better)
Translates to: SPCKLACATGSVPSACAISLLSY*QTRCLV
Trigger: CACCAGACATCGGGTTTGGCAGTATGAGAGCAAGCT...AATTGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp CCTTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTGCGCAAGGGTTCCAGCTTaGTCTCATACTGCCAAACCC +
Preference number: 4 (lower is better)
Translates to: PWCSRAILRKQRLQRLHCARVPA*SHTAKP
Trigger: GGGTTTGGCAGTATGAGAGCAAGCTGGAACCCTTGC...GCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp TTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTGCTCCTAAGGCTTGAAGCATaGTCCCAGGGTCCTCGGAAG +
Preference number: 4 (lower is better)
Translates to: LVFQGHITQTEAPTIALLLRLEA*SQGPRK
Trigger: CTTCCGAGGACCCTGGGAGCATGCTTCAAGCCTTAG...GAGCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp AGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCAATTCTCCAGATCTGCATCTaGCCGATTCAGGGTTGCAAT +
Preference number: 4 (lower is better)
Translates to: SPCKLACATGSVPSACAILQICI*PIQGCN
Trigger: ATTGCAACCCTGAATCGGGCAGATGCAGATCTGGAG...AATTGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp CAGGGTGGCACCGTGCTCCTCCATCAGGCTCCTCTTCTGGTGCAGGTACTGGCCTCCAGCAATAGAAACTaGTTTTTGAAAACAGCACTC +
Preference number: 4 (lower is better)
Translates to: QGGTVLLHQAPLLVQVLASSNRN*FLKTAL
Trigger: GAGTGCTGTTTTCAAAAAGCAGTTTCTATTGCTGGA...GGCCAGTACCTGCACCAGAAGAGGAGCCTGATGGAGGAGCACGGTGCCACCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp AGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTTCCGCAGAAGGTTGCTaGACTCTACAGCAGACCTCT +
Preference number: 4 (lower is better)
Translates to: RESGCHHTDHSFCSRGWGSAEGC*TLQQTS
Trigger: AGAGGTCTGCTGTAGAGTGCAGCAACCTTCTGCGGA...ACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp CCGGATCTTGGGGAGGGCCAAGCTCCTGTCCATCTGAGCAAAGCAGCCATGGACAAGTCTTCTTCTTGTTaGAAAGCGAGAGACTTCCTC +
Preference number: 4 (lower is better)
Translates to: PDLGEGQAPVHLSKAAMDKSSSC*KARDFL
Trigger: GAGGAAGTCTCTCGCTTTGCAACAAGAAGAAGACTT...GTCCATGGCTGCTTTGCTCAGATGGACAGGAGCTTGGCCCTCCCCAAGATCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp GTTGTGCATTATAAACACACAAACACCGGCGGGCAGGAGAAAATCATCCCTTCTGTGAGTCAGCTGGGCTaGAGCGGTGCTCAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: VVHYKHTNTGGQEKIIPSVSQLG*SGAQKA
Trigger: GGCCTTCTGAGCACCGCTGCAGCCCAGCTGACTCAC...AGAAGGGATGATTTTCTCCTGCCCGCCGGTGTTTGTGTGTTTATAATGCACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp AGGCTCCAACGATTGCACTGCTCAGTCCGAGGTAACTCATCTATGTTTGGGACAGCCTGCTCCCTACGCTaGTCCCTGTGCTTTTGTAGC +
Preference number: 4 (lower is better)
Translates to: RLQRLHCSVRGNSSMFGTACSLR*SLCFCS
Trigger: GCTACAAAAGCACAGGGAGCAGCGTAGGGAGCAGGC...TGTCCCAAACATAGATGAGTTACCTCGGACTGAGCAGTGCAATCGTTGGAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp GGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGAGGCTCCTCTTCTGGTaGAGGTACTGGCCGGCATCC +
Preference number: 4 (lower is better)
Translates to: GGGAERRSVYVLVIWKRVRLLFW*RYWPAS
Trigger: GGATGCCGGCCAGTACCTGCACCAGAAGAGGAGCCT...CACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp TGGGGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAAGGCTCCTCTTCTGGTaGAGGTACTGGCCGGCATCC +
Preference number: 4 (lower is better)
Translates to: WGGGAERRSVYVLVIWKRRLLFW*RYWPAS
Trigger: GGATGCCGGCCAGTACCTGCACCAGAAGAGGAGCCT...TCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp GGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGTCCTCCAGGATCTGCTaGAGGAAGAGCCAGGGCACC +
Preference number: 4 (lower is better)
Translates to: GGGAERRSVYVLVIWKRVSSRIC*RKSQGT
Trigger: GGTGCCCTGGCTCTTCCTGCAGCAGATCCTGGAGGA...CACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp GGCCATCTGGAAATTCATGAGACAAGATTAAACCGAGTCCCTGCAAGTTGGCATCGTCGCAGCTCTGCCTaGTCCTCTGTCACGGCCTCA +
Preference number: 4 (lower is better)
Translates to: GHLEIHETRLNRVPASWHRRSSA*SSVTAS
Trigger: TGAGGCCGTGACAGAGGAGCAGGCAGAGCTGCGACG...ATGCCAACTTGCAGGGACTCGGTTTAATCTTGTCTCATGAATTTCCAGATGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp CAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCACCAGCGTCGCAGCTCTaGCTGCTCCTCTGTCACGGC +
Preference number: 4 (lower is better)
Translates to: QNIRVENLAVTTQTIASAPASQL*LLLCHG
Trigger: GCCGTGACAGAGGAGCAGGCAGAGCTGCGACGCTGG...TGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp CGATTGCACTGCTCAGTCCGAGGTAACTCATCTATGTTTGGGACAAACTTGCAGACCTTGGACTGTTGCTaGAGCTCAGGGGCAGCCACG +
Preference number: 4 (lower is better)
Translates to: RLHCSVRGNSSMFGTNLQTLDCC*SSGAAT
Trigger: CGTGGCTGCCCCTGAGCTGCAGCAACAGTCCAAGGT...CTGCAAGTTTGTCCCAAACATAGATGAGTTACCTCGGACTGAGCAGTGCAATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp CCTTCCTTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCAAGCAACAAGCGACTGTaGAAAGCCTCCCTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: PSLVFQGHITQTEAPTIASNKRL*KASLLC
Trigger: GCACAGGAGGGAGGCTTTGCACAGTCGCTTGTTGCT...TGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAAGGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp CTTCCTTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACACTCCAGGATCTGTGTaGAGGCCGACTTGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: LPWCSRAILRKQRLQRLHTPGSV*RPTWSA
Trigger: TGCTGACCAAGTCGGCCTGCACACAGATCCTGGAGT...GTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAAGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp CAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCATGGGCTGCCTCCTGCTaGACCAGCTGGTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: QNIRVENLAVTTQTIASAWAASC*TSWSSS
Trigger: GCTGGAGGACCAGCTGGTGCAGCAGGAGGCAGCCCA...TGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp TGGGGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGACCTCGCCAGGTACGATaGCAGTCTCAGCTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: WGGGAERRSVYVLVIWKRPRQVR*QSQLLA
Trigger: AGCCAGGAGCTGAGACTGGCATCGTACCTGGCGAGG...TCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp AGGCTCCAACGATTGCACTGCTCAGTCCGAGGTAACTCATCTATGTTTGGGACATGGTTCCCTGACCTCTaGTTTCTCTTGCGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: RLQRLHCSVRGNSSMFGTWFPDL*FLLRAH
Trigger: GTGGGCCCGCAAGAGAAAGCAGAGGTCAGGGAACCA...TGTCCCAAACATAGATGAGTTACCTCGGACTGAGCAGTGCAATCGTTGGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CCA 90 bp CCAAGTCATCCTCGTCATGAGGGCCATGACATTGTGTCAGCGCAGTGTGCCCACTTCTTGCTAAAAGCCTaGAATCCTTCCGAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: PSHPRHEGHDIVSAQCAHFLLKA*NPSEVL
Trigger: CAGGACCTCGGAAGGATTCCAGGCTTTTAGCAAGAA...GTGGGCACACTGCGCTGACACAATGTCATGGCCCTCATGACGAGGATGACTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CCA 90 bp GTTGTGCATTATAAACACACAAACACCGGCGGGCAGGAGAAAATCATCCCTTCTAAGAACCCTGCTGCGTaGAGGCCGTGGTGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: VVHYKHTNTGGQEKIIPSKNPAA*RPWCGR
Trigger: TCTGCCGCACCACGGCCTCCACGCAGCAGGGTTCTT...AGAAGGGATGATTTTCTCCTGCCCGCCGGTGTTTGTGTGTTTATAATGCACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp TTCCTTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTTCCTGTTCCAGGCCATaGAGGGTCCGCAGAAGGTTG +
Preference number: 4 (lower is better)
Translates to: FLGVPGPYYANRGSNDCTSCSRP*RVRRRL
Trigger: CAACCTTCTGCGGACCCTCCATGGCCTGGAACAGGA...AGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CCA 90 bp GCAGCGGTGCTCAGAAGGCCCTGCACACGGGTCTCTGATGACTGGAGGTTCTGGCATTTTAGCTGCCTCTaGTTTCAATTCCCCTTTGAA +
Preference number: 4 (lower is better)
Translates to: AAVLRRPCTRVSDDWRFWHFSCL*FQFPFE
Trigger: TTCAAAGGGGAATTGAAACCAGAGGCAGCTAAAATG...CCAGAACCTCCAGTCATCAGAGACCCGTGTGCAGGGCCTTCTGAGCACCGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CCA 90 bp GAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTGTGGATGACTGGAGGTTCTaGACCAGATATTCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: ESGCHHTDHSFCSRGWGVDDWRF*TRYSLW
Trigger: CCACAGGGAATATCTGGTCCAGAACCTCCAGTCATC...CACACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp CCTTCCTTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCATTCTGGTGCAGGTACTaGCCGGCATCCTCAACCGTT +
Preference number: 4 (lower is better)
Translates to: PSLVFQGHITQTEAPTIAFWCRY*PASSTV
Trigger: AACGGTTGAGGATGCCGGCCAGTACCTGCACCAGAA...TGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAAGGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CCA 90 bp CAGAGGCTCCAACGATTGCACTGCTCAGTCCGAGGTAACTCATCTATGTTTGGGGCCGCAGCTCGTCGGTaGCCTTTTCAAACAGCGAAA +
Preference number: 4 (lower is better)
Translates to: QRLQRLHCSVRGNSSMFGAAARR*PFQTAK
Trigger: TTTCGCTGTTTGAAAAGGCCACCGACGAGCTGCGGC...CCCAAACATAGATGAGTTACCTCGGACTGAGCAGTGCAATCGTTGGAGCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CCA 90 bp TTGCAAAGGTGTCTGCCTCCATGTTTTCCAACAAGTCTTCTAGCACGACACTGTGGGGCAGCCACGGCCTaGTCCAGCTTCACGAACTCT +
Preference number: 4 (lower is better)
Translates to: LQRCLPPCFPTSLLARHCGAATA*SSFTNS
Trigger: AGAGTTCGTGAAGCTGGACCAGGCCGTGGCTGCCCC...ACAGTGTCGTGCTAGAAGACTTGTTGGAAAACATGGAGGCAGACACCTTTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CCA 90 bp GAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTGTGGTGACTTTCTCACCTTaGACTGTTGCTGCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: ESGCHHTDHSFCSRGWGVVTFSP*TVAAAQ
Trigger: CTGAGCTGCAGCAACAGTCCAAGGTGAGAAAGTCAC...CACACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp CACCAGGTCTTCAGAGGCCTGTTCCTCACAGAGGTGAATTTTGTCTTCGATGCAACCCGGGACGCCTTCTaGAACTGCAGAGCAACAAGC +
Preference number: 4 (lower is better)
Translates to: HQVFRGLFLTEVNFVFDATRDAF*NCRATS
Trigger: GCTTGTTGCTCTGCAGTTCCAGAAGGCGTCCCGGGT...TGCATCGAAGACAAAATTCACCTCTGTGAGGAACAGGCCTCTGAAGACCTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CCA 90 bp TGCTTATCAGATCTCCTCGCAGTTTGCCATCTAAGGCTTGCCACCAGCTCTGGTCTCTTGCTCAGGGCTTaGTGCAGGACAGTAGAGACC +
Preference number: 4 (lower is better)
Translates to: CLSDLLAVCHLRLATSSGLLLRA*CRTVET
Trigger: GGTCTCTACTGTCCTGCACCAAGCCCTGAGCAAGAG...ACCAGAGCTGGTGGCAAGCCTTAGATGGCAAACTGCGAGGAGATCTGATAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CCA 90 bp GTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTGCTCAGTCCTGCTCCAGTAATGTCTaGCTCTTGCTCAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: VPGPYYANRGSNDCTAQSCSSNV*LLLRAW
Trigger: CCAAGCCCTGAGCAAGAGCCAGACATTACTGGAGCA...GGACTGAGCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CCA 90 bp AAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATTGGCCCCGGGCACCATaGCCATCCTCGCCAGGTACG +
Preference number: 4 (lower is better)
Translates to: KKECLCPCDMEESGPSGNWPRAP*PSSPGT
Trigger: CGTACCTGGCGAGGATGGCCATGGTGCCCGGGGCCA...ATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp TGGGGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGACCACATGTCTCTCGGTaGCCGAATCCAGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: WGGGAERRSVYVLVIWKRPHVSR*PNPAGP
Trigger: TGGCCCTGCTGGATTCGGCCACCGAGAGACATGTGG...TCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp AGGCTCCAACGATTGCACTGCTCAGTCCGAGGTAACTCATCTATGTTTGGGACATCGCTCTCAGCTGCGTaGTCCACATGTCTCTCGGTG +
Preference number: 4 (lower is better)
Translates to: RLQRLHCSVRGNSSMFGTSLSAA*STCLSV
Trigger: CACCGAGAGACATGTGGACCACGCAGCTGAGAGCGA...TGTCCCAAACATAGATGAGTTACCTCGGACTGAGCAGTGCAATCGTTGGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CCA 90 bp CCGAGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCAAGAGAGTGGGCCATCTaGAAATTCATGAGACAAGAT +
Preference number: 4 (lower is better)
Translates to: PSPCKLACATGSVPSACAREWAI*KFMRQD
Trigger: ATCTTGTCTCATGAATTTCCAGATGGCCCACTCTCT...TGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp TATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATTCATGAGACAAGAGACCTAGGAGCCACCTaGGGATCCCGGGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: YVLVIWKRVGHLEIHETRDLGAT*GSRGGC
Trigger: GCAGCCACCCCGGGATCCCCAGGTGGCTCCTAGGTC...TCTTGTCTCATGAATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344408.10
CDS-3UTR TCA 90 bp TTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTGCTCCCTGACACACGGATGTaGATCCAGAGTTTCCCCATC +
Preference number: 4 (lower is better)
Translates to: LVFQGHITQTEAPTIALLPDTRM*IQSFPI
Trigger: GATGGGGAAACTCTGGATTCACATCCGTGTGTCAGG...GAGCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR TCA 90 bp CTTGCTCAGGGCTTGGTGCAGGACAGTAGAGACCTGCCTTTCAGAATCCACCTCAAAGCAAATAAGGAATaGGCCCATGGCCCACTAGAG +
Preference number: 4 (lower is better)
Translates to: LAQGLVQDSRDLPFRIHLKANKE*AHGPLE
Trigger: CTCTAGTGGGCCATGGGCTCATTCCTTATTTGCTTT...GAGGTGGATTCTGAAAGGCAGGTCTCTACTGTCCTGCACCAAGCCCTGAGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR TCA 90 bp TGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTGCTCAAACTCTTCTAAGGCTTaGAGCATGCTCCCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: WCSRAILRKQRLQRLHCSNSSKA*SMLPGS
Trigger: GGACCCTGGGAGCATGCTTCAAGCCTTAGAAGAGTT...TGAGCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR TCA 90 bp GTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTGCTCAGTCCACAGCCAGCTGTCTGTaGGCTTTGGCAAAGTCTTCT +
Preference number: 4 (lower is better)
Translates to: VPGPYYANRGSNDCTAQSTASCL*ALAKSS
Trigger: AGAAGACTTTGCCAAAGCTCACAGACAGCTGGCTGT...GGACTGAGCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR TCA 90 bp GGTCAGTTGTCAGGATTGGCTCCTCCAAGTCATCCTCGTCATGAGGGCCATGACGAAAAGACTTCTGTCTaGGCCCGCTCCAATAGCATT +
Preference number: 4 (lower is better)
Translates to: GQLSGLAPPSHPRHEGHDEKTSV*ARSNSI
Trigger: AATGCTATTGGAGCGGGCTCAGACAGAAGTCTTTTC...GTCATGGCCCTCATGACGAGGATGACTTGGAGGAGCCAATCCTGACAACTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR TCA 90 bp TATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATTCATGAGACAAGACTCCTGGGTCATGGCTaGGTTCTGCAGGCGCCGCAG +
Preference number: 4 (lower is better)
Translates to: YVLVIWKRVGHLEIHETRLLGHG*VLQAPQ
Trigger: CTGCGGCGCCTGCAGAACTCAGCCATGACCCAGGAG...TCTTGTCTCATGAATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp GGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGCCTCCTGCCTCATCCTaGGCAGCTCCTCTTCAGACA +
Preference number: 4 (lower is better)
Translates to: GGGAERRSVYVLVIWKRVPPASS*AAPLQT
Trigger: TGTCTGAAGAGGAGCTGCTCAGGATGAGGCAGGAGG...CACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp AAACCGAGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTATATCATCCTCTCTCTaGGAGGGAGACATGTCTTCT +
Preference number: 4 (lower is better)
Translates to: KPSPCKLACATGSVPSACISSSL*EGDMSS
Trigger: AGAAGACATGTCTCCCTCTCAGAGAGAGGATGATAT...ACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp GTTGTGCATTATAAACACACAAACACCGGCGGGCAGGAGAAAATCATCCCTTCTGCGTGGAGGCCGTGGTaGGGCAGAACCGTTACGTTT +
Preference number: 4 (lower is better)
Translates to: VVHYKHTNTGGQEKIIPSAWRPW*GRTVTF
Trigger: AAACGTAACGGTTCTGCCGCACCACGGCCTCCACGC...AGAAGGGATGATTTTCTCCTGCCCGCCGGTGTTTGTGTGTTTATAATGCACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp TTGTCAGGATTGGCTCCTCCAAGTCATCCTCGTCATGAGGGCCATGACATTGTGACAAGCCTCCAGATCTaGATCTGCCCGATTCAGGGT +
Preference number: 4 (lower is better)
Translates to: LSGLAPPSHPRHEGHDIVTSLQI*ICPIQG
Trigger: ACCCTGAATCGGGCAGATGCAGATCTGGAGGCTTGT...CACAATGTCATGGCCCTCATGACGAGGATGACTTGGAGGAGCCAATCCTGACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp AAACCGAGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTACATTCAGCTGTCAATaGCACCATCTTCCGATCGTA +
Preference number: 4 (lower is better)
Translates to: KPSPCKLACATGSVPSACTFSCQ*HHLPIV
Trigger: TACGATCGGAAGATGGTGGCATTGACAGCTGAATGT...ACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp TCAGGATTGGCTCCTCCAAGTCATCCTCGTCATGAGGGCCATGACATTGTGTCATCCGCAGAAGGTTGCTaGACTCTACAGCAGACCTCT +
Preference number: 4 (lower is better)
Translates to: SGLAPPSHPRHEGHDIVSSAEGC*TLQQTS
Trigger: AGAGGTCTGCTGTAGAGTGCAGCAACCTTCTGCGGA...TGACACAATGTCATGGCCCTCATGACGAGGATGACTTGGAGGAGCCAATCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp TATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATTCATGAGACAAGAGCTGGGCTGCAGCGGTaGTCAGAAGGCCCTGCACAC +
Preference number: 4 (lower is better)
Translates to: YVLVIWKRVGHLEIHETRAGLQR*SEGPAH
Trigger: GTGTGCAGGGCCTTCTGAGCACCGCTGCAGCCCAGC...TCTTGTCTCATGAATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp TGGGGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGCCTGCTCCCTACGCTaGTCCCTGTGCTTTTGTAGC +
Preference number: 4 (lower is better)
Translates to: WGGGAERRSVYVLVIWKRACSLR*SLCFCS
Trigger: GCTACAAAAGCACAGGGAGCAGCGTAGGGAGCAGGC...TCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp CCAACTTCCTTTTCCAGAGAATATCATCCTCTCTCTGAGAGGGAGACATGTCTTTGGTCCAGACGCTCCTaGAGCTCCTCCAGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: PTSFSREYHPLSERETCLWSRRS*SSSRVA
Trigger: TGCCACCCTGGAGGAGCTGCAGGAGCGTCTGGACCA...AAGACATGTCTCCCTCTCAGAGAGAGGATGATATTCTCTGGAAAAGGAAGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp GAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTGTGTCAGAAGCTCTCCCTTaGTTTTACTCTTGGACCGTG +
Preference number: 4 (lower is better)
Translates to: ESGCHHTDHSFCSRGWGVSEALP*FYSWTV
Trigger: CACGGTCCAAGAGTAAAAGCAAGGGAGAGCTTCTGA...CACACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp CTTCCTTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACGACGCCTTCTGGAACTaGAGAGCAACAAGCGACTGT +
Preference number: 4 (lower is better)
Translates to: LPWCSRAILRKQRLQRLHDAFWN*RATSDC
Trigger: ACAGTCGCTTGTTGCTCTGCAGTTCCAGAAGGCGTC...GTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAAGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp GTTGTGCATTATAAACACACAAACACCGGCGGGCAGGAGAAAATCATCCCTTCTTGGAGCTCCCGGCTGTaGGACTCCAGGATCTGTGTG +
Preference number: 4 (lower is better)
Translates to: VVHYKHTNTGGQEKIIPSWSSRL*DSRICV
Trigger: CACACAGATCCTGGAGTCGCACAGCCGGGAGCTCCA...AGAAGGGATGATTTTCTCCTGCCCGCCGGTGTTTGTGTGTTTATAATGCACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp GTAACAAATACAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATCCATCGGCCACCCACTaGTGCCAGCTCGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: VTNTKHKSRESGCHHTDHPSATH*CQLARA
Trigger: GGCCCTGGCGAGCTGGCAGCAGTGGGTGGCCGATGG...ATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTGTATTTGTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp CTCCCAGGCCCTTCCTTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAGGTTGCAAAGGTGTCTaGCTCCATGTTTTCCAACAA +
Preference number: 4 (lower is better)
Translates to: LPGPSLVFQGHITQTEAPGCKGV*LHVFQQ
Trigger: TTGTTGGAAAACATGGAGGCAGACACCTTTGCAACC...TGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAAGGAAGGGCCTGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp GTAACAAATACAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATCTGCCCACGTCGGCCTaGTCCGCTCCGCCATCGCTC +
Preference number: 4 (lower is better)
Translates to: VTNTKHKSRESGCHHTDHLPTSA*SAPPSL
Trigger: GAGCGATGGCGGAGCGGAGCAGGCCGACGTGGGCAG...ATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTGTATTTGTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp CTTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTGCTGATCTCCTCGCAGTTTaGCATCTAAGGCTTGCCACC +
Preference number: 4 (lower is better)
Translates to: LGVPGPYYANRGSNDCTADLLAV*HLRLAT
Trigger: GGTGGCAAGCCTTAGATGGCAAACTGCGAGGAGATC...AGCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp AAACCGAGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTTTCTTTAATATGCTCTaGTTTCTCTTGCGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: KPSPCKLACATGSVPSACFFNML*FLLRAH
Trigger: GTGGGCCCGCAAGAGAAAGCAGAGCATATTAAAGAA...ACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp GGCCATCTGGAAATTCATGAGACAAGATTAAACCGAGTCCCTGCAAGTTGGCATCCCTGCAAGTTGGCATaGGCTACGGGGTCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: GHLEIHETRLNRVPASWHPCKLA*ATGSVP
Trigger: AGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGG...ATGCCAACTTGCAGGGACTCGGTTTAATCTTGTCTCATGAATTTCCAGATGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp AGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTATTAAACCGAGTCCCTaGAAGTTGGCATGCGCTACG +
Preference number: 4 (lower is better)
Translates to: RESGCHHTDHSFCSRGWGIKPSP*KLACAT
Trigger: CGTAGCGCATGCCAACTTGCAGGGACTCGGTTTAAT...ACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp TATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATTCATGAGACAAGAAAACAGGCCAGCCGCTaGGCCACCTCTCTGGGGACC +
Preference number: 4 (lower is better)
Translates to: YVLVIWKRVGHLEIHETRKQASR*ATSLGT
Trigger: GGTCCCCAGAGAGGTGGCCCAGCGGCTGGCCTGTTT...TCTTGTCTCATGAATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310917.6
CDS-3UTR CCA 90 bp CTGGTCCAGCTTCACGAACTCTGCTTCTCGCCACGCAGTCTGAAATTGCTGCAGTTCTTGCTAAAAGCCTaGAATCCTTCCGAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LVQLHELCFSPRSLKLLQFLLKA*NPSEVL
Trigger: CAGGACCTCGGAAGGATTCCAGGCTTTTAGCAAGAA...CTGCAGCAATTTCAGACTGCGTGGCGAGAAGCAGAGTTCGTGAAGCTGGACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CCA 90 bp TATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATTCATGAGACAAGAGCTGCGTGGAGGCCGTaGTGCGGCAGAACCGTTACG +
Preference number: 4 (lower is better)
Translates to: YVLVIWKRVGHLEIHETRAAWRP*CGRTVT
Trigger: CGTAACGGTTCTGCCGCACCACGGCCTCCACGCAGC...TCTTGTCTCATGAATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp AAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATGCTGCGTGGAGGCCGTaGTGCGGCAGAACCGTTACG +
Preference number: 4 (lower is better)
Translates to: KKECLCPCDMEESGPSGNAAWRP*CGRTVT
Trigger: CGTAACGGTTCTGCCGCACCACGGCCTCCACGCAGC...ATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp AGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTCGGGTCTCTGATGACTaGAGGTTCTGGACCAGATAT +
Preference number: 4 (lower is better)
Translates to: RESGCHHTDHSFCSRGWGRVSDD*RFWTRY
Trigger: ATATCTGGTCCAGAACCTCCAGTCATCAGAGACCCG...ACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp CAACTTCCTTTTCCAGAGAATATCATCCTCTCTCTGAGAGGGAGACATGTCTTCGCAGCTCCTCCAGGGTaGCACCGTGCTCCTCCATCA +
Preference number: 4 (lower is better)
Translates to: QLPFPENIILSLRGRHVFAAPPG*HRAPPS
Trigger: TGATGGAGGAGCACGGTGCCACCCTGGAGGAGCTGC...GAAGACATGTCTCCCTCTCAGAGAGAGGATGATATTCTCTGGAAAAGGAAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CCA 90 bp CAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGGGGCAGCCACGGCCTaGTCCAGCTTCACGAACTCT +
Preference number: 4 (lower is better)
Translates to: QNIRVENLAVTTQTIASAGAATA*SSFTNS
Trigger: AGAGTTCGTGAAGCTGGACCAGGCCGTGGCTGCCCC...TGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp GTTGTGCATTATAAACACACAAACACCGGCGGGCAGGAGAAAATCATCCCTTCTTTCCTCTCCAACTCCTaGAGCTCCCGGCTGTGCGAC +
Preference number: 4 (lower is better)
Translates to: VVHYKHTNTGGQEKIIPSFLSNS*SSRLCD
Trigger: GTCGCACAGCCGGGAGCTCCAGGAGTTGGAGAGGAA...AGAAGGGATGATTTTCTCCTGCCCGCCGGTGTTTGTGTGTTTATAATGCACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp TCCAACGATTGCACTGCTCAGTCCGAGGTAACTCATCTATGTTTGGGACAAACTTCCTGCTGCACCAGCTaGTCCTCCAGCTTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: SNDCTAQSEVTHLCLGQTSCCTS*SSSFLS
Trigger: GGAGAGGAAGCTGGAGGACCAGCTGGTGCAGCAGGA...AGTTTGTCCCAAACATAGATGAGTTACCTCGGACTGAGCAGTGCAATCGTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CCA 90 bp GGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGTCGCTCTCAGCTGCGTaGTCCACATGTCTCTCGGTG +
Preference number: 4 (lower is better)
Translates to: GGGAERRSVYVLVIWKRVSLSAA*STCLSV
Trigger: CACCGAGAGACATGTGGACCACGCAGCTGAGAGCGA...CACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp CAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCTTGCCACCAGCTCTaGTGTTTCCTCCGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: QNIRVENLAVTTQTIASAACHQL*CFLRLP
Trigger: GGGCAGGCGGAGGAAACACCAGAGCTGGTGGCAAGC...TGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp AAACCGAGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTAGTTCTTCTTTTTCCTaGGAGGAACGTGCAGTGAGA +
Preference number: 4 (lower is better)
Translates to: KPSPCKLACATGSVPSACSSSFS*EERAVR
Trigger: TCTCACTGCACGTTCCTCCCAGGAAAAAGAAGAACT...ACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp AGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCAATTTGCCCAAGGCCCTCATaGCCTTTTTGGCATTCAAAA +
Preference number: 4 (lower is better)
Translates to: SPCKLACATGSVPSACAICPRPS*PFWHSK
Trigger: TTTTGAATGCCAAAAAGGCCATGAGGGCCTTGGGCA...AATTGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp GGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGCGCAGGTCTTTCCCTTaGGCTAGTCCATGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: GGGAERRSVYVLVIWKRVRRSFP*ASPCPR
Trigger: CCTTGGGCATGGACTAGCCCAAGGGAAAGACCTGCG...CACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp AAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATACAGCTGACACCTGTTaGCGGGGGAGGGCTCCACTC +
Preference number: 4 (lower is better)
Translates to: KKECLCPCDMEESGPSGNTADTC*RGRAPL
Trigger: GAGTGGAGCCCTCCCCCGTCAACAGGTGTCAGCTGT...ATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310917.6
CDS-3UTR TCA 90 bp CCTTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTGCAAAGCAAATAAGGAATaGGCCCATGGCCCACTAGAG +
Preference number: 4 (lower is better)
Translates to: PWCSRAILRKQRLQRLHCKANKE*AHGPLE
Trigger: CTCTAGTGGGCCATGGGCTCATTCCTTATTTGCTTT...GCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR TCA 90 bp TATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATTCATGAGACAAGAGTTGGGCAGGAAGCTTaGGGCTCTCCCCGTTCCCGA +
Preference number: 4 (lower is better)
Translates to: YVLVIWKRVGHLEIHETRVGQEA*GSPRSR
Trigger: TCGGGAACGGGGAGAGCCTCAAGCTTCCTGCCCAAC...TCTTGTCTCATGAATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp GGCCATCTGGAAATTCATGAGACAAGATTAAACCGAGTCCCTGCAAGTTGGCATACTGATAGCGAACCATaGGGAAGAGGGCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GHLEIHETRLNRVPASWHTDSEP*GRGQPR
Trigger: CCTGGGCTGCCCTCTTCCTCATGGTTCGCTATCAGT...ATGCCAACTTGCAGGGACTCGGTTTAATCTTGTCTCATGAATTTCCAGATGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp GTTGTGCATTATAAACACACAAACACCGGCGGGCAGGAGAAAATCATCCCTTCTACTGATAGCGAACCATaGGGAAGAGGGCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: VVHYKHTNTGGQEKIIPSTDSEP*GRGQPR
Trigger: CCTGGGCTGCCCTCTTCCTCATGGTTCGCTATCAGT...AGAAGGGATGATTTTCTCCTGCCCGCCGGTGTTTGTGTGTTTATAATGCACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp CAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCACGCCATCAGCTGAGGTaGACGGCAAGGGTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: QNIRVENLAVTTQTIASARHQLR*TARVPA
Trigger: AGCTGGAACCCTTGCCGTTCACCTCAGCTGATGGCG...TGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp TGGGGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGATCTCGTGCTTCTGAATaGGGTGAGTCAGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: WGGGAERRSVYVLVIWKRSRASE*GESAGL
Trigger: CAGCCCAGCTGACTCACCTCATTCAGAAGCACGAGA...TCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp GGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGAGGAGCAGAGCTTCATaGAGATCAGGTGCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: GGGAERRSVYVLVIWKRVRSRAS*RSGAPS
Trigger: GCTGGGAGCACCTGATCTTCATGAAGCTCTGCTCCT...CACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp GATTGCACTGCTCAGTCCGAGGTAACTCATCTATGTTTGGGACAAACTTGCAGGAAGCTCCTGTCCATCTaGGCAAAGCAGCCATGGACC +
Preference number: 4 (lower is better)
Translates to: DCTAQSEVTHLCLGQTCRKLLSI*AKQPWT
Trigger: GGTCCATGGCTGCTTTGCTCAGATGGACAGGAGCTT...CCTGCAAGTTTGTCCCAAACATAGATGAGTTACCTCGGACTGAGCAGTGCAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR TCA 90 bp GAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTGTGTGTTCCTCACAGAGGTaGATTTTGTCTTCGATGCAC +
Preference number: 4 (lower is better)
Translates to: ESGCHHTDHSFCSRGWGVCSSQR*ILSSMH
Trigger: GTGCATCGAAGACAAAATTCACCTCTGTGAGGAACA...CACACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp GTGAATTTTGTCTTCGATGCACTTCTTCAGAAGCTCTCCCTTGCTTTTACTCTTGCAAGTCCTGGATGCTaGGGAGGGCGGTGTAGGCCG +
Preference number: 4 (lower is better)
Translates to: VNFVFDALLQKLSLAFTLASPGC*GGRCRP
Trigger: CGGCCTACACCGCCCTCCTCAGCATCCAGGACTTGC...AAGAGTAAAAGCAAGGGAGAGCTTCTGAAGAAGTGCATCGAAGACAAAATTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR TCA 90 bp AGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCAATTTCTCTCAAACACTGCTaGTGTTGCTCCAGTAATGTC +
Preference number: 4 (lower is better)
Translates to: SPCKLACATGSVPSACAISLKHC*CCSSNV
Trigger: GACATTACTGGAGCAACATCAGCAGTGTTTGAGAGA...AATTGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp GGATTGGCTCCTCCAAGTCATCCTCGTCATGAGGGCCATGACATTGTGTCAGCGTCTCTCAAACACTGCTaGTGTTGCTCCAGTAATGTC +
Preference number: 4 (lower is better)
Translates to: GLAPPSHPRHEGHDIVSASLKHC*CCSSNV
Trigger: GACATTACTGGAGCAACATCAGCAGTGTTTGAGAGA...CGCTGACACAATGTCATGGCCCTCATGACGAGGATGACTTGGAGGAGCCAATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR TCA 90 bp GTTGTGCATTATAAACACACAAACACCGGCGGGCAGGAGAAAATCATCCCTTCTGGGAGGAACGTGCAGTaGGATCTCTGGCTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: VVHYKHTNTGGQEKIIPSGRNVQ*DLWLLW
Trigger: CCAAAGGAGCCAGAGATCTCACTGCACGTTCCTCCC...AGAAGGGATGATTTTCTCCTGCCCGCCGGTGTTTGTGTGTTTATAATGCACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp TCCAACGATTGCACTGCTCAGTCCGAGGTAACTCATCTATGTTTGGGACAAACTGAGGGGACAGGGATTTaGTTTGCCAAGGGACGCAGG +
Preference number: 4 (lower is better)
Translates to: SNDCTAQSEVTHLCLGQTEGTGI*FAKGRR
Trigger: CCTGCGTCCCTTGGCAAAGCAAATCCCTGTCCCCTC...AGTTTGTCCCAAACATAGATGAGTTACCTCGGACTGAGCAGTGCAATCGTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp ATGAGGGCCATGACATTGTGTCAGCGCAGTGTGCCCACAGCTGGGCTCATAGGACGACCCAGACACCAGTaGACATTTCTGAAAAATTAC +
Preference number: 4 (lower is better)
Translates to: MRAMTLCQRSVPTAGLIGRPRHQ*TFLKNY
Trigger: GTAATTTTTCAGAAATGTGCACTGGTGTCTGGGTCG...TCCTATGAGCCCAGCTGTGGGCACACTGCGCTGACACAATGTCATGGCCCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp GGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGTATGCGGGCTGTCTGTaGTTCACTCGACCCAGACAC +
Preference number: 4 (lower is better)
Translates to: GGGAERRSVYVLVIWKRVYAGCL*FTRPRH
Trigger: GTGTCTGGGTCGAGTGAAGCACAGACAGCCCGCATA...CACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp AGAAAATCATCCCTTCTCTCTTCAGATGCTCCCGCAGGTCTTTCCCTTGGGCTAACAAGCCTCCAGATCTaGATCTGCCCGATTCAGGGT +
Preference number: 4 (lower is better)
Translates to: RKSSLLSSDAPAGLSLGLTSLQI*ICPIQG
Trigger: ACCCTGAATCGGGCAGATGCAGATCTGGAGGCTTGT...TAGCCCAAGGGAAAGACCTGCGGGAGCATCTGAAGAGAGAAGGGATGATTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp TATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATTCATGAGACAAGAGTGAGTCAGCTGGGCTaGAGCGGTGCTCAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: YVLVIWKRVGHLEIHETRVSQLG*SGAQKA
Trigger: GGCCTTCTGAGCACCGCTGCAGCCCAGCTGACTCAC...TCTTGTCTCATGAATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp CCAACTTCCTTTTCCAGAGAATATCATCCTCTCTCTGAGAGGGAGACATGTCTTAGGCTCCTCTTCTGGTaGAGGTACTGGCCGGCATCC +
Preference number: 4 (lower is better)
Translates to: PTSFSREYHPLSERETCLRLLFW*RYWPAS
Trigger: GGATGCCGGCCAGTACCTGCACCAGAAGAGGAGCCT...AAGACATGTCTCCCTCTCAGAGAGAGGATGATATTCTCTGGAAAAGGAAGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp ATATGGAAGAGAGTGGGCCATCTGGAAATTCATGAGACAAGATTAAACCGAGTCTCCAGGGTGGCACCGTaGTCCTCCATCAGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: IWKRVGHLEIHETRLNRVSRVAP*SSIRLL
Trigger: GAGGAGCCTGATGGAGGAGCACGGTGCCACCCTGGA...GACTCGGTTTAATCTTGTCTCATGAATTTCCAGATGGCCCACTCTCTTCCATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp ATATGGAAGAGAGTGGGCCATCTGGAAATTCATGAGACAAGATTAAACCGAGTCTGGTCCAGACGCTCCTaGAGCTCCTCCAGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: IWKRVGHLEIHETRLNRVWSRRS*SSSRVA
Trigger: TGCCACCCTGGAGGAGCTGCAGGAGCGTCTGGACCA...GACTCGGTTTAATCTTGTCTCATGAATTTCCAGATGGCCCACTCTCTTCCATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp TATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATTCATGAGACAAGAGTCATGGCTGAGTTCTaGAGGCGCCGCAGCTCGTCG +
Preference number: 4 (lower is better)
Translates to: YVLVIWKRVGHLEIHETRVMAEF*RRRSSS
Trigger: CGACGAGCTGCGGCGCCTGCAGAACTCAGCCATGAC...TCTTGTCTCATGAATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp CAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCATCCTCCAGGATCTGCTaGAGGAAGAGCCAGGGCACC +
Preference number: 4 (lower is better)
Translates to: QNIRVENLAVTTQTIASASSRIC*RKSQGT
Trigger: GGTGCCCTGGCTCTTCCTGCAGCAGATCCTGGAGGA...TGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp CAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCCATCTCCTTGCCGTaGTCCTCCAGGATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QNIRVENLAVTTQTIASAAISLP*SSRICC
Trigger: GCAGCAGATCCTGGAGGAGCACGGCAAGGAGATGGC...TGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp AAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATCGTCGCAGCTCTGCCTaGTCCTCTGTCACGGCCTCA +
Preference number: 4 (lower is better)
Translates to: KKECLCPCDMEESGPSGNRRSSA*SSVTAS
Trigger: TGAGGCCGTGACAGAGGAGCAGGCAGAGCTGCGACG...ATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp AGAAAATCATCCCTTCTCTCTTCAGATGCTCCCGCAGGTCTTTCCCTTGGGCTATTCATGAAGATCAGGTaGTCCCAGCGTCGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: RKSSLLSSDAPAGLSLGLFMKIR*SQRRSS
Trigger: AGAGCTGCGACGCTGGGAGCACCTGATCTTCATGAA...TAGCCCAAGGGAAAGACCTGCGGGAGCATCTGAAGAGAGAAGGGATGATTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp CGATTGCACTGCTCAGTCCGAGGTAACTCATCTATGTTTGGGACAAACTTGCAGCAGCTTCACGAACTCTaGTTCTCGCCACGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: RLHCSVRGNSSMFGTNLQQLHEL*FSPRSL
Trigger: CAGACTGCGTGGCGAGAAGCAGAGTTCGTGAAGCTG...CTGCAAGTTTGTCCCAAACATAGATGAGTTACCTCGGACTGAGCAGTGCAATCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp CAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAACCTTGGACTGTTGCTaGAGCTCAGGGGCAGCCACG +
Preference number: 4 (lower is better)
Translates to: QNIRVENLAVTTQTIASATLDCC*SSGAAT
Trigger: CGTGGCTGCCCCTGAGCTGCAGCAACAGTCCAAGGT...TGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp CAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCATGGAGCTCCCGGCTGTaGGACTCCAGGATCTGTGTG +
Preference number: 4 (lower is better)
Translates to: QNIRVENLAVTTQTIASAWSSRL*DSRICV
Trigger: CACACAGATCCTGGAGTCGCACAGCCGGGAGCTCCA...TGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp GAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTGTGGGTTGCAAAGGTGTCTaGCTCCATGTTTTCCAACAA +
Preference number: 4 (lower is better)
Translates to: ESGCHHTDHSFCSRGWGVGCKGV*LHVFQQ
Trigger: TTGTTGGAAAACATGGAGGCAGACACCTTTGCAACC...CACACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp TTTAATAGATCAATGGTTTCTGCCCCTACAATGGGTACAGGGGCCAGTTCGCCACTGGCTGCACAGGGTTaGAAAGGTGTCTGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: FNRSMVSAPTMGTGASSPLAAQG*KGVCLH
Trigger: ATGGAGGCAGACACCTTTGCAACCCTGTGCAGCCAG...TGGCGAACTGGCCCCTGTACCCATTGTAGGGGCAGAAACCATTGATCTATTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp CTTCCTTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTTGCCATCTAAGGCTTaGCACCAGCTCTGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: LPWCSRAILRKQRLQRLHLPSKA*HQLWCF
Trigger: GAAACACCAGAGCTGGTGGCAAGCCTTAGATGGCAA...GTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAAGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp AAACCGAGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGGGGTCTGTGCCTTCTaGATGTGCAATTTATATTTG +
Preference number: 4 (lower is better)
Translates to: KPSPCKLACATGSVPSACGVCAF*MCNLYL
Trigger: CAAATATAAATTGCACATGCAGAAGGCACAGACCCC...ACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp TTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTGCTCTTTCCTGACCTAACATaGACAAGGCCATGGGGTTCG +
Preference number: 4 (lower is better)
Translates to: LVFQGHITQTEAPTIALLFPDLT*TRPWGS
Trigger: CGAACCCCATGGCCTTGTCCATGTTAGGTCAGGAAA...GAGCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CCA 90 bp TCCAACGATTGCACTGCTCAGTCCGAGGTAACTCATCTATGTTTGGGACAAACTTCCCTGCCTAGGTCCTaGGTGACAGCTGACACCTGT +
Preference number: 4 (lower is better)
Translates to: SNDCTAQSEVTHLCLGQTSLPRS*VTADTC
Trigger: ACAGGTGTCAGCTGTCACCCAGGACCTAGGCAGGGA...AGTTTGTCCCAAACATAGATGAGTTACCTCGGACTGAGCAGTGCAATCGTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CCA 90 bp GGCCATCTGGAAATTCATGAGACAAGATTAAACCGAGTCCCTGCAAGTTGGCATGCAGCTCCGAGAGGTTaGCTGACGAGGTTGTCTTGG +
Preference number: 4 (lower is better)
Translates to: GHLEIHETRLNRVPASWHAAPRG*LTRLSW
Trigger: CCAAGACAACCTCGTCAGCCAACCTCTCGGAGCTGC...ATGCCAACTTGCAGGGACTCGGTTTAATCTTGTCTCATGAATTTCCAGATGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp GAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTGTGGCCATCATCTCTCTCTaGTACTGGTTTTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: ESGCHHTDHSFCSRGWGVAIISL*YWFSIF
Trigger: GAAGATGGAAAACCAGTACCAGAGAGAGATGATGGC...CACACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp GTTGTGCATTATAAACACACAAACACCGGCGGGCAGGAGAAAATCATCCCTTCTTCCTGTTCCAGGCCATaGAGGGTCCGCAGAAGGTTG +
Preference number: 4 (lower is better)
Translates to: VVHYKHTNTGGQEKIIPSSCSRP*RVRRRL
Trigger: CAACCTTCTGCGGACCCTCCATGGCCTGGAACAGGA...AGAAGGGATGATTTTCTCCTGCCCGCCGGTGTTTGTGTGTTTATAATGCACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp GGTGAATTTTGTCTTCGATGCACTTCTTCAGAAGCTCTCCCTTGCTTTTACTCTGCAGCTCCTGGGTCATaGCTGAGTTCTGCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: GEFCLRCTSSEALPCFYSAAPGS*LSSAGA
Trigger: GGCGCCTGCAGAACTCAGCCATGACCCAGGAGCTGC...AGAGTAAAAGCAAGGGAGAGCTTCTGAAGAAGTGCATCGAAGACAAAATTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CCA 90 bp TATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATTCATGAGACAAGAGGGGCAGCCACGGCCTaGTCCAGCTTCACGAACTCT +
Preference number: 4 (lower is better)
Translates to: YVLVIWKRVGHLEIHETRGAATA*SSFTNS
Trigger: AGAGTTCGTGAAGCTGGACCAGGCCGTGGCTGCCCC...TCTTGTCTCATGAATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp TGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTGCTCAGTGACTTTCTCACCTTaGACTGTTGCTGCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: WCSRAILRKQRLQRLHCSVTFSP*TVAAAQ
Trigger: CTGAGCTGCAGCAACAGTCCAAGGTGAGAAAGTCAC...TGAGCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CCA 90 bp GTTGTGCATTATAAACACACAAACACCGGCGGGCAGGAGAAAATCATCCCTTCTGAGGCTGTGAGGCTGTaGGCAGTACCACACTCAGGA +
Preference number: 4 (lower is better)
Translates to: VVHYKHTNTGGQEKIIPSEAVRL*AVPHSG
Trigger: TCCTGAGTGTGGTACTGCCCACAGCCTCACAGCCTC...AGAAGGGATGATTTTCTCCTGCCCGCCGGTGTTTGTGTGTTTATAATGCACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp GGCCATCTGGAAATTCATGAGACAAGATTAAACCGAGTCCCTGCAAGTTGGCATTCGCTCTCAGCTGCGTaGTCCACATGTCTCTCGGTG +
Preference number: 4 (lower is better)
Translates to: GHLEIHETRLNRVPASWHSLSAA*STCLSV
Trigger: CACCGAGAGACATGTGGACCACGCAGCTGAGAGCGA...ATGCCAACTTGCAGGGACTCGGTTTAATCTTGTCTCATGAATTTCCAGATGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp CCGAGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCATGTTTAATAGATCAATaGTTTCTGCCCCTACAATGG +
Preference number: 4 (lower is better)
Translates to: PSPCKLACATGSVPSACACLIDQ*FLPLQW
Trigger: CCATTGTAGGGGCAGAAACCATTGATCTATTAAACA...TGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp TGCTCCTCTGTCACGGCCTCAGGAGCGTCATCCTTCAGTCTCTGCCTCACGCTCTGTTTAATAGATCAATaGTTTCTGCCCCTACAATGG +
Preference number: 4 (lower is better)
Translates to: CSSVTASGASSFSLCLTLCLIDQ*FLPLQW
Trigger: CCATTGTAGGGGCAGAAACCATTGATCTATTAAACA...GAGCGTGAGGCAGAGACTGAAGGATGACGCTCCTGAGGCCGTGACAGAGGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CCA 90 bp TTGCAAAGGTGTCTGCCTCCATGTTTTCCAACAAGTCTTCTAGCACGACACTGTCGCAGGTCTTTCCCTTaGGCTAGTCCATGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: LQRCLPPCFPTSLLARHCRRSFP*ASPCPR
Trigger: CCTTGGGCATGGACTAGCCCAAGGGAAAGACCTGCG...ACAGTGTCGTGCTAGAAGACTTGTTGGAAAACATGGAGGCAGACACCTTTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CCA 90 bp CAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCACGAGTCCCTGCAAGTTaGCATGCGCTACGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: QNIRVENLAVTTQTIASARVPAS*HALRGL
Trigger: CAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCG...TGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp AAACCGAGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTAGAGAGTGGGCCATCTaGAAATTCATGAGACAAGAT +
Preference number: 4 (lower is better)
Translates to: KPSPCKLACATGSVPSACREWAI*KFMRQD
Trigger: ATCTTGTCTCATGAATTTCCAGATGGCCCACTCTCT...ACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp CCATATTACGCAAACAGAGGCTCCAACGATTGCACTGCTCAGTCCGAGGTAACTTCCCAGGCCCTTCCTTaGTGTTCCAGGGCCATATTA +
Preference number: 4 (lower is better)
Translates to: PYYANRGSNDCTAQSEVTSQALP*CSRAIL
Trigger: TAATATGGCCCTGGAACACCAAGGAAGGGCCTGGGA...AGTTACCTCGGACTGAGCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CCA 90 bp TCAGGATTGGCTCCTCCAAGTCATCCTCGTCATGAGGGCCATGACATTGTGTCAGTCAGTTGTCAGGATTaGCTCCTCCAAGTCATCCTC +
Preference number: 4 (lower is better)
Translates to: SGLAPPSHPRHEGHDIVSVSCQD*LLQVIL
Trigger: GAGGATGACTTGGAGGAGCCAATCCTGACAACTGAC...TGACACAATGTCATGGCCCTCATGACGAGGATGACTTGGAGGAGCCAATCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR TCA 90 bp ATCCAGGTACCCTGCTCTCTCGTGCTTCTGAATGAGGTGAGTCAGCTGGGCTGCTTTTCAGAAGTCCCTTaGACTTCTCTTGAAATGTCC +
Preference number: 4 (lower is better)
Translates to: IQVPCSLVLLNEVSQLGCFSEVP*TSLEMS
Trigger: GGACATTTCAAGAGAAGTTCAAGGGACTTCTGAAAA...GCAGCCCAGCTGACTCACCTCATTCAGAAGCACGAGAGAGCAGGGTACCTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR TCA 90 bp TCCAACGATTGCACTGCTCAGTCCGAGGTAACTCATCTATGTTTGGGACAAACTCTCCGAGAGGTTGGCTaGCGAGGTTGTCTTGGTGTT +
Preference number: 4 (lower is better)
Translates to: SNDCTAQSEVTHLCLGQTLREVG*RGCLGV
Trigger: AACACCAAGACAACCTCGTCAGCCAACCTCTCGGAG...AGTTTGTCCCAAACATAGATGAGTTACCTCGGACTGAGCAGTGCAATCGTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR TCA 90 bp GGCCATCTGGAAATTCATGAGACAAGATTAAACCGAGTCCCTGCAAGTTGGCATAGAGGAGGAAGGCAATaGAGAACCCTGCTGCGTGGA +
Preference number: 4 (lower is better)
Translates to: GHLEIHETRLNRVPASWHRGGRQ*RTLLRG
Trigger: TCCACGCAGCAGGGTTCTTCATTGCCTTCCTCCTCT...ATGCCAACTTGCAGGGACTCGGTTTAATCTTGTCTCATGAATTTCCAGATGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp GGTGAATTTTGTCTTCGATGCACTTCTTCAGAAGCTCTCCCTTGCTTTTACTCTCGCCATCAGCTGAGGTaGACGGCAAGGGTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GEFCLRCTSSEALPCFYSRHQLR*TARVPA
Trigger: AGCTGGAACCCTTGCCGTTCACCTCAGCTGATGGCG...AGAGTAAAAGCAAGGGAGAGCTTCTGAAGAAGTGCATCGAAGACAAAATTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR TCA 90 bp TGGGGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGATCTCGCCACGCAGTCTaGAATTGCTGCAGCAGAACT +
Preference number: 4 (lower is better)
Translates to: WGGGAERRSVYVLVIWKRSRHAV*NCCSRT
Trigger: AGTTCTGCTGCAGCAATTTCAGACTGCGTGGCGAGA...TCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp TATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATTCATGAGACAAGAGCCAATGGGCTCCAGTaGCAGGTGTGGCCAACTTCC +
Preference number: 4 (lower is better)
Translates to: YVLVIWKRVGHLEIHETRANGLQ*QVWPTS
Trigger: GGAAGTTGGCCACACCTGTCACTGGAGCCCATTGGC...TCTTGTCTCATGAATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp AAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATGCCAATGGGCTCCAGTaGCAGGTGTGGCCAACTTCC +
Preference number: 4 (lower is better)
Translates to: KKECLCPCDMEESGPSGNANGLQ*QVWPTS
Trigger: GGAAGTTGGCCACACCTGTCACTGGAGCCCATTGGC...ATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp TGGGGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGACTGGGGAGGTGGGGCTaGAAGAAGGAGTGTTTATGT +
Preference number: 4 (lower is better)
Translates to: WGGGAERRSVYVLVIWKRLGRWG*KKECLC
Trigger: ACATAAACACTCCTTCTTTCAGCCCCACCTCCCCAG...TCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp CAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCATCCGGTTGCGTTCAGTaGAGACCAGCTGAGCACCCA +
Preference number: 4 (lower is better)
Translates to: QNIRVENLAVTTQTIASASGCVQ*RPAEHP
Trigger: TGGGTGCTCAGCTGGTCTGCACTGAACGCAACCGGA...TGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310917.6
CDS-3UTR GCA 90 bp GGCCATCTGGAAATTCATGAGACAAGATTAAACCGAGTCCCTGCAAGTTGGCATACCCTCACTTCCGGTTaGGTTCAGTGCAGACCAGCT +
Preference number: 4 (lower is better)
Translates to: GHLEIHETRLNRVPASWHTLTSG*VQCRPA
Trigger: AGCTGGTCTGCACTGAACGCAACCGGAAGTGAGGGT...ATGCCAACTTGCAGGGACTCGGTTTAATCTTGTCTCATGAATTTCCAGATGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310917.6
CDS-3UTR GCA 90 bp AGGCTCCAACGATTGCACTGCTCAGTCCGAGGTAACTCATCTATGTTTGGGACAAGCTTGCTCTCATACTaGCAAACCCGATGTCTGGTG +
Preference number: 4 (lower is better)
Translates to: RLQRLHCSVRGNSSMFGTSLLSY*QTRCLV
Trigger: CACCAGACATCGGGTTTGGCAGTATGAGAGCAAGCT...TGTCCCAAACATAGATGAGTTACCTCGGACTGAGCAGTGCAATCGTTGGAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp GGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGGCAAGGGTTCCAGCTTaGTCTCATACTGCCAAACCC +
Preference number: 4 (lower is better)
Translates to: GGGAERRSVYVLVIWKRVARVPA*SHTAKP
Trigger: GGGTTTGGCAGTATGAGAGCAAGCTGGAACCCTTGC...CACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp GGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGAGAGACTTCCTCAAGTaGTCCTGTTCCAGGCCATGG +
Preference number: 4 (lower is better)
Translates to: GGGAERRSVYVLVIWKRVRDFLK*SCSRPW
Trigger: CCATGGCCTGGAACAGGAGCACTTGAGGAAGTCTCT...CACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp CAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCCTGCTCCCTACGCTaGTCCCTGTGCTTTTGTAGC +
Preference number: 4 (lower is better)
Translates to: QNIRVENLAVTTQTIASAACSLR*SLCFCS
Trigger: GCTACAAAAGCACAGGGAGCAGCGTAGGGAGCAGGC...TGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp GTGAATTTTGTCTTCGATGCACTTCTTCAGAAGCTCTCCCTTGCTTTTACTCTTGTCATGGCTGAGTTCTaGAGGCGCCGCAGCTCGTCG +
Preference number: 4 (lower is better)
Translates to: VNFVFDALLQKLSLAFTLVMAEF*RRRSSS
Trigger: CGACGAGCTGCGGCGCCTGCAGAACTCAGCCATGAC...AAGAGTAAAAGCAAGGGAGAGCTTCTGAAGAAGTGCATCGAAGACAAAATTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp AAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATGCCATCTCCTTGCCGTaGTCCTCCAGGATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KKECLCPCDMEESGPSGNAISLP*SSRICC
Trigger: GCAGCAGATCCTGGAGGAGCACGGCAAGGAGATGGC...ATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp GTTGTGCATTATAAACACACAAACACCGGCGGGCAGGAGAAAATCATCCCTTCTTCATCCTTCAGTCTCTaGCTCACGCTCTGGACACCC +
Preference number: 4 (lower is better)
Translates to: VVHYKHTNTGGQEKIIPSSSFSL*LTLWTP
Trigger: GGGTGTCCAGAGCGTGAGGCAGAGACTGAAGGATGA...AGAAGGGATGATTTTCTCCTGCCCGCCGGTGTTTGTGTGTTTATAATGCACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp CGATTGCACTGCTCAGTCCGAGGTAACTCATCTATGTTTGGGACAAACTTGCAGTTCATGAAGATCAGGTaGTCCCAGCGTCGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: RLHCSVRGNSSMFGTNLQFMKIR*SQRRSS
Trigger: AGAGCTGCGACGCTGGGAGCACCTGATCTTCATGAA...CTGCAAGTTTGTCCCAAACATAGATGAGTTACCTCGGACTGAGCAGTGCAATCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp AAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATACCTTGGACTGTTGCTaGAGCTCAGGGGCAGCCACG +
Preference number: 4 (lower is better)
Translates to: KKECLCPCDMEESGPSGNTLDCC*SSGAAT
Trigger: CGTGGCTGCCCCTGAGCTGCAGCAACAGTCCAAGGT...ATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp CCAAGTCATCCTCGTCATGAGGGCCATGACATTGTGTCAGCGCAGTGTGCCCACGAATTTTGTCTTCGATaGACTTCTTCAGAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: PSHPRHEGHDIVSAQCAHEFCLR*TSSEAL
Trigger: GAGAGCTTCTGAAGAAGTGCATCGAAGACAAAATTC...GTGGGCACACTGCGCTGACACAATGTCATGGCCCTCATGACGAGGATGACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp TTTAATAGATCAATGGTTTCTGCCCCTACAATGGGTACAGGGGCCAGTTCGCCAGACGCCTTCTGGAACTaGAGAGCAACAAGCGACTGT +
Preference number: 4 (lower is better)
Translates to: FNRSMVSAPTMGTGASSPDAFWN*RATSDC
Trigger: ACAGTCGCTTGTTGCTCTGCAGTTCCAGAAGGCGTC...TGGCGAACTGGCCCCTGTACCCATTGTAGGGGCAGAAACCATTGATCTATTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp TGGGGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTAATGTCTGGCTCTTaGTCAGGGCTTGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: WGGGAERRSVYVLVIWKRVMSGS*SGLGAG
Trigger: TCCTGCACCAAGCCCTGAGCAAGAGCCAGACATTAC...TCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp CTCCAACGATTGCACTGCTCAGTCCGAGGTAACTCATCTATGTTTGGGACAAACGTAATGTCTGGCTCTTaGTCAGGGCTTGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: LQRLHCSVRGNSSMFGTNVMSGS*SGLGAG
Trigger: TCCTGCACCAAGCCCTGAGCAAGAGCCAGACATTAC...GTTTGTCCCAAACATAGATGAGTTACCTCGGACTGAGCAGTGCAATCGTTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp AGAAAATCATCCCTTCTCTCTTCAGATGCTCCCGCAGGTCTTTCCCTTGGGCTATTGCCATCTAAGGCTTaGCACCAGCTCTGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: RKSSLLSSDAPAGLSLGLLPSKA*HQLWCF
Trigger: GAAACACCAGAGCTGGTGGCAAGCCTTAGATGGCAA...TAGCCCAAGGGAAAGACCTGCGGGAGCATCTGAAGAGAGAAGGGATGATTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp TTCCTTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTCTCCAACGATTGCACTaGTCAGTCCGAGGTAACTCA +
Preference number: 4 (lower is better)
Translates to: FLGVPGPYYANRGSNDCTLQRLH*SVRGNS
Trigger: TGAGTTACCTCGGACTGAGCAGTGCAATCGTTGGAG...AGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CCA 90 bp AAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATGCTGGGCCACCTCTCTaGGGACCTAGAAAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: KKECLCPCDMEESGPSGNAGPPL*GPRKRG
Trigger: TCCCCTCTTTCTAGGTCCCCAGAGAGGTGGCCCAGC...ATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310917.6
CDS-3UTR CCA 90 bp AGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCAATTCAATTTCATTCCAAGTaGTGCTTCCACTGCAGTCTT +
Preference number: 4 (lower is better)
Translates to: SPCKLACATGSVPSACAIQFHSK*CFHCSL
Trigger: AAGACTGCAGTGGAAGCACCACTTGGAATGAAATTG...AATTGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp CTGGTCCAGCTTCACGAACTCTGCTTCTCGCCACGCAGTCTGAAATTGCTGCAGCAATTTCATTCCAAGTaGTGCTTCCACTGCAGTCTT +
Preference number: 4 (lower is better)
Translates to: LVQLHELCFSPRSLKLLQQFHSK*CFHCSL
Trigger: AAGACTGCAGTGGAAGCACCACTTGGAATGAAATTG...CTGCAGCAATTTCAGACTGCGTGGCGAGAAGCAGAGTTCGTGAAGCTGGACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CCA 90 bp TCAGGATTGGCTCCTCCAAGTCATCCTCGTCATGAGGGCCATGACATTGTGTCAATTTTTCTCTCTACTTaGGGTGAGAGGTGGCCACTG +
Preference number: 4 (lower is better)
Translates to: SGLAPPSHPRHEGHDIVSIFLST*GERWPL
Trigger: CAGTGGCCACCTCTCACCCCAAGTAGAGAGAAAAAT...TGACACAATGTCATGGCCCTCATGACGAGGATGACTTGGAGGAGCCAATCCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CCA 90 bp AGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTGCCATCATCTCTCTCTaGTACTGGTTTTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: RESGCHHTDHSFCSRGWGAIISL*YWFSIF
Trigger: GAAGATGGAAAACCAGTACCAGAGAGAGATGATGGC...ACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp GTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTGCTCAGTCCGCCATCATCTCTCTCTaGTACTGGTTTTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: VPGPYYANRGSNDCTAQSAIISL*YWFSIF
Trigger: GAAGATGGAAAACCAGTACCAGAGAGAGATGATGGC...GGACTGAGCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CCA 90 bp CATGAGGGCCATGACATTGTGTCAGCGCAGTGTGCCCACAGCTGGGCTCATAGGACCAGATATTCCCTGTaGCCAAATCTTTTACTTAGA +
Preference number: 4 (lower is better)
Translates to: HEGHDIVSAQCAHSWAHRTRYSL*PNLLLR
Trigger: TCTAAGTAAAAGATTTGGCCACAGGGAATATCTGGT...CCTATGAGCCCAGCTGTGGGCACACTGCGCTGACACAATGTCATGGCCCTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CCA 90 bp CCAAGTCATCCTCGTCATGAGGGCCATGACATTGTGTCAGCGCAGTGTGCCCACAATAGCATTTCCATTTaGTCTTCATCCAGGTACCCT +
Preference number: 4 (lower is better)
Translates to: PSHPRHEGHDIVSAQCAHNSISI*SSSRYP
Trigger: AGGGTACCTGGATGAAGACCAAATGGAAATGCTATT...GTGGGCACACTGCGCTGACACAATGTCATGGCCCTCATGACGAGGATGACTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CCA 90 bp GGCCATCTGGAAATTCATGAGACAAGATTAAACCGAGTCCCTGCAAGTTGGCATTTCTGGTGCAGGTACTaGCCGGCATCCTCAACCGTT +
Preference number: 4 (lower is better)
Translates to: GHLEIHETRLNRVPASWHFWCRY*PASSTV
Trigger: AACGGTTGAGGATGCCGGCCAGTACCTGCACCAGAA...ATGCCAACTTGCAGGGACTCGGTTTAATCTTGTCTCATGAATTTCCAGATGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp GTAACAAATACAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATCTCGGGCCCGGATCTTaGGGAGGGCCAAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: VTNTKHKSRESGCHHTDHLGPGS*GGPSSC
Trigger: ACAGGAGCTTGGCCCTCCCCAAGATCCGGGCCCGAG...ATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTGTATTTGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp GTTGTGCATTATAAACACACAAACACCGGCGGGCAGGAGAAAATCATCCCTTCTGTGTGCAGGCCGACTTaGTCAGCATCTCAGATGCAC +
Preference number: 4 (lower is better)
Translates to: VVHYKHTNTGGQEKIIPSVCRPT*SASQMH
Trigger: GTGCATCTGAGATGCTGACCAAGTCGGCCTGCACAC...AGAAGGGATGATTTTCTCCTGCCCGCCGGTGTTTGTGTGTTTATAATGCACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp TGGGGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGATGCTCCAGTAATGTCTaGCTCTTGCTCAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: WGGGAERRSVYVLVIWKRCSSNV*LLLRAW
Trigger: CCAAGCCCTGAGCAAGAGCCAGACATTACTGGAGCA...TCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp TTTTCCTGCTTTAAGTCATTGTCCAACTTCTGCTTGATTGAAAAGACTTCTGTCTGGCCCCGGGCACCATaGCCATCCTCGCCAGGTACG +
Preference number: 4 (lower is better)
Translates to: FSCFKSLSNFCLIEKTSVWPRAP*PSSPGT
Trigger: CGTACCTGGCGAGGATGGCCATGGTGCCCGGGGCCA...GACAGAAGTCTTTTCAATCAAGCAGAAGTTGGACAATGACTTAAAGCAGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CCA 90 bp GGTGAATTTTGTCTTCGATGCACTTCTTCAGAAGCTCTCCCTTGCTTTTACTCTGGGCCAGTTCGCCAATaGGCTCCAGTGACAGGTGTG +
Preference number: 4 (lower is better)
Translates to: GEFCLRCTSSEALPCFYSGPVRQ*APVTGV
Trigger: CACACCTGTCACTGGAGCCCATTGGCGAACTGGCCC...AGAGTAAAAGCAAGGGAGAGCTTCTGAAGAAGTGCATCGAAGACAAAATTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR TCA 90 bp AAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATTGCCTAGGTCCTGGGTaGCAGCTGACACCTGTTGAC +
Preference number: 4 (lower is better)
Translates to: KKECLCPCDMEESGPSGNCLGPG*QLTPVD
Trigger: GTCAACAGGTGTCAGCTGTCACCCAGGACCTAGGCA...ATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310917.6
CDS-3UTR TCA 90 bp TTCCTTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTACTGCAGTCTTAAAGTaGCAGCATTCCACTTTGGGC +
Preference number: 4 (lower is better)
Translates to: FLGVPGPYYANRGSNDCTTAVLK*QHSTLG
Trigger: GCCCAAAGTGGAATGCTGTCACTTTAAGACTGCAGT...AGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR TCA 90 bp TGGGGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGACCCTTGAACTTCTCTTaGAATGTCCCCATACAGGCG +
Preference number: 4 (lower is better)
Translates to: WGGGAERRSVYVLVIWKRPLNFS*NVPIQA
Trigger: CGCCTGTATGGGGACATTTCAAGAGAAGTTCAAGGG...TCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp CAACTTCCTTTTCCAGAGAATATCATCCTCTCTCTGAGAGGGAGACATGTCTTCCTCCGAGAGGTTGGCTaGCGAGGTTGTCTTGGTGTT +
Preference number: 4 (lower is better)
Translates to: QLPFPENIILSLRGRHVFLREVG*RGCLGV
Trigger: AACACCAAGACAACCTCGTCAGCCAACCTCTCGGAG...GAAGACATGTCTCCCTCTCAGAGAGAGGATGATATTCTCTGGAAAAGGAAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR TCA 90 bp TCCAACGATTGCACTGCTCAGTCCGAGGTAACTCATCTATGTTTGGGACAAACTCTGTGTTCTGTTCCGTaGCGAGCTCTGAAAGGTGAG +
Preference number: 4 (lower is better)
Translates to: SNDCTAQSEVTHLCLGQTLCSVP*RALKGE
Trigger: CTCACCTTTCAGAGCTCGTCACGGAACAGAACACAG...AGTTTGTCCCAAACATAGATGAGTTACCTCGGACTGAGCAGTGCAATCGTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR TCA 90 bp TGGGGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAACAGCCAGCTGTCTGTaGGCTTTGGCAAAGTCTTCT +
Preference number: 4 (lower is better)
Translates to: WGGGAERRSVYVLVIWKRTASCL*ALAKSS
Trigger: AGAAGACTTTGCCAAAGCTCACAGACAGCTGGCTGT...TCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp CAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCATCTCGTGCTTCTGAATaGGGTGAGTCAGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: QNIRVENLAVTTQTIASASRASE*GESAGL
Trigger: CAGCCCAGCTGACTCACCTCATTCAGAAGCACGAGA...TGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp ATAGATCAATGGTTTCTGCCCCTACAATGGGTACAGGGGCCAGTTCGCCAATGGATATCATCCTCTCTCTaGGAGGGAGACATGTCTTCT +
Preference number: 4 (lower is better)
Translates to: IDQWFLPLQWVQGPVRQWISSSL*EGDMSS
Trigger: AGAAGACATGTCTCCCTCTCAGAGAGAGGATGATAT...CCATTGGCGAACTGGCCCCTGTACCCATTGTAGGGGCAGAAACCATTGATCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR TCA 90 bp ATATGGAAGAGAGTGGGCCATCTGGAAATTCATGAGACAAGATTAAACCGAGTCGGGAGGAACGTGCAGTaGGATCTCTGGCTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: IWKRVGHLEIHETRLNRVGRNVQ*DLWLLW
Trigger: CCAAAGGAGCCAGAGATCTCACTGCACGTTCCTCCC...GACTCGGTTTAATCTTGTCTCATGAATTTCCAGATGGCCCACTCTCTTCCATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp GGCCATCTGGAAATTCATGAGACAAGATTAAACCGAGTCCCTGCAAGTTGGCATCTGGGGAGGTGGGGCTaGAAGAAGGAGTGTTTATGT +
Preference number: 4 (lower is better)
Translates to: GHLEIHETRLNRVPASWHLGRWG*KKECLC
Trigger: ACATAAACACTCCTTCTTTCAGCCCCACCTCCCCAG...ATGCCAACTTGCAGGGACTCGGTTTAATCTTGTCTCATGAATTTCCAGATGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp CCTTCCTTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCAAAGTGGTGCTTCCACTaGAGTCTTAAAGTGACAGCA +
Preference number: 4 (lower is better)
Translates to: PSLVFQGHITQTEAPTIAKWCFH*SLKVTA
Trigger: TGCTGTCACTTTAAGACTGCAGTGGAAGCACCACTT...TGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAAGGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp CCAGCTTCACGAACTCTGCTTCTCGCCACGCAGTCTGAAATTGCTGCAGCAGAACGACCCAGACACCAGTaGACATTTCTGAAAAATTAC +
Preference number: 4 (lower is better)
Translates to: PASRTLLLATQSEIAAAERPRHQ*TFLKNY
Trigger: GTAATTTTTCAGAAATGTGCACTGGTGTCTGGGTCG...TTCTGCTGCAGCAATTTCAGACTGCGTGGCGAGAAGCAGAGTTCGTGAAGCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp CCAACTTCCTTTTCCAGAGAATATCATCCTCTCTCTGAGAGGGAGACATGTCTTTATGCGGGCTGTCTGTaGTTCACTCGACCCAGACAC +
Preference number: 4 (lower is better)
Translates to: PTSFSREYHPLSERETCLYAGCL*FTRPRH
Trigger: GTGTCTGGGTCGAGTGAAGCACAGACAGCCCGCATA...AAGACATGTCTCCCTCTCAGAGAGAGGATGATATTCTCTGGAAAAGGAAGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp GTTGTGCATTATAAACACACAAACACCGGCGGGCAGGAGAAAATCATCCCTTCTGCAAGGGTTCCAGCTTaGTCTCATACTGCCAAACCC +
Preference number: 4 (lower is better)
Translates to: VVHYKHTNTGGQEKIIPSARVPA*SHTAKP
Trigger: GGGTTTGGCAGTATGAGAGCAAGCTGGAACCCTTGC...AGAAGGGATGATTTTCTCCTGCCCGCCGGTGTTTGTGTGTTTATAATGCACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp GATTGCACTGCTCAGTCCGAGGTAACTCATCTATGTTTGGGACAAACTTGCAGGCTCCAGATCTGCATCTaGCCGATTCAGGGTTGCAAT +
Preference number: 4 (lower is better)
Translates to: DCTAQSEVTHLCLGQTCRLQICI*PIQGCN
Trigger: ATTGCAACCCTGAATCGGGCAGATGCAGATCTGGAG...CCTGCAAGTTTGTCCCAAACATAGATGAGTTACCTCGGACTGAGCAGTGCAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp CCTTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTGCTTTCAGCAACTCTTCTaGTTCCTCCATTGCCATCAT +
Preference number: 4 (lower is better)
Translates to: PWCSRAILRKQRLQRLHCFQQLF*FLHCHH
Trigger: ATGATGGCAATGGAGGAAGCAGAAGAGTTGCTGAAA...GCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp ATATGGAAGAGAGTGGGCCATCTGGAAATTCATGAGACAAGATTAAACCGAGTCGGGTCCGCAGAAGGTTaGTGCACTCTACAGCAGACC +
Preference number: 4 (lower is better)
Translates to: IWKRVGHLEIHETRLNRVGSAEG*CTLQQT
Trigger: GGTCTGCTGTAGAGTGCAGCAACCTTCTGCGGACCC...GACTCGGTTTAATCTTGTCTCATGAATTTCCAGATGGCCCACTCTCTTCCATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp CAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCACAGCTTCACGAACTCTaGTTCTCGCCACGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: QNIRVENLAVTTQTIASAQLHEL*FSPRSL
Trigger: CAGACTGCGTGGCGAGAAGCAGAGTTCGTGAAGCTG...TGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp AGGCTCCAACGATTGCACTGCTCAGTCCGAGGTAACTCATCTATGTTTGGGACATCAGAAGCTCTCCCTTaGTTTTACTCTTGGACCGTG +
Preference number: 4 (lower is better)
Translates to: RLQRLHCSVRGNSSMFGTSEALP*FYSWTV
Trigger: CACGGTCCAAGAGTAAAAGCAAGGGAGAGCTTCTGA...TGTCCCAAACATAGATGAGTTACCTCGGACTGAGCAGTGCAATCGTTGGAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp AAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATAAAGCCTCCCTCCTGTaGCTCCATCCGCTGCACTCT +
Preference number: 4 (lower is better)
Translates to: KKECLCPCDMEESGPSGNKASLL*LHPLHS
Trigger: AGAGTGCAGCGGATGGAGGCACAGGAGGGAGGCTTT...ATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp CAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAAGCAACAAGCGACTGTaGAAAGCCTCCCTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: QNIRVENLAVTTQTIASASNKRL*KASLLC
Trigger: GCACAGGAGGGAGGCTTTGCACAGTCGCTTGTTGCT...TGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp TGGGGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGATTGCCATCTAAGGCTTaGCACCAGCTCTGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: WGGGAERRSVYVLVIWKRLPSKA*HQLWCF
Trigger: GAAACACCAGAGCTGGTGGCAAGCCTTAGATGGCAA...TCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp TATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATTCATGAGACAAGATCCCTGCCTAGGTCCTaGGTGACAGCTGACACCTGT +
Preference number: 4 (lower is better)
Translates to: YVLVIWKRVGHLEIHETRSLPRS*VTADTC
Trigger: ACAGGTGTCAGCTGTCACCCAGGACCTAGGCAGGGA...TCTTGTCTCATGAATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310917.6
CDS-3UTR CCA 90 bp AGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCAATTCATTTTAGCTGCCTCTaGTTTCAATTCCCCTTTGAA +
Preference number: 4 (lower is better)
Translates to: SPCKLACATGSVPSACAIHFSCL*FQFPFE
Trigger: TTCAAAGGGGAATTGAAACCAGAGGCAGCTAAAATG...AATTGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp TGGGGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGACGGGTCTCTGATGACTaGAGGTTCTGGACCAGATAT +
Preference number: 4 (lower is better)
Translates to: WGGGAERRSVYVLVIWKRRVSDD*RFWTRY
Trigger: ATATCTGGTCCAGAACCTCCAGTCATCAGAGACCCG...TCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp GTGTGGCCAACTTCCTTTTCCAGAGAATATCATCCTCTCTCTGAGAGGGAGACACGGGTCTCTGATGACTaGAGGTTCTGGACCAGATAT +
Preference number: 4 (lower is better)
Translates to: VWPTSFSREYHPLSERETRVSDD*RFWTRY
Trigger: ATATCTGGTCCAGAACCTCCAGTCATCAGAGACCCG...TGTCTCCCTCTCAGAGAGAGGATGATATTCTCTGGAAAAGGAAGTTGGCCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CCA 90 bp GAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTGTGAATAGCATTTCCATTTaGTCTTCATCCAGGTACCCT +
Preference number: 4 (lower is better)
Translates to: ESGCHHTDHSFCSRGWGVNSISI*SSSRYP
Trigger: AGGGTACCTGGATGAAGACCAAATGGAAATGCTATT...CACACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp GTAACAAATACAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATGCAGCTCCTCCAGGGTaGCACCGTGCTCCTCCATCA +
Preference number: 4 (lower is better)
Translates to: VTNTKHKSRESGCHHTDHAAPPG*HRAPPS
Trigger: TGATGGAGGAGCACGGTGCCACCCTGGAGGAGCTGC...ATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTGTATTTGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp CAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCCGCAGCTCGTCGGTaGCCTTTTCAAACAGCGAAA +
Preference number: 4 (lower is better)
Translates to: QNIRVENLAVTTQTIASAAAARR*PFQTAK
Trigger: TTTCGCTGTTTGAAAAGGCCACCGACGAGCTGCGGC...TGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp TGGGGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGACTTTCTCACCTTaGACTGTTGCTGCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: WGGGAERRSVYVLVIWKRVTFSP*TVAAAQ
Trigger: CTGAGCTGCAGCAACAGTCCAAGGTGAGAAAGTCAC...TCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp ATATGGAAGAGAGTGGGCCATCTGGAAATTCATGAGACAAGATTAAACCGAGTCACCCGGGACGCCTTCTaGAACTGCAGAGCAACAAGC +
Preference number: 4 (lower is better)
Translates to: IWKRVGHLEIHETRLNRVTRDAF*NCRATS
Trigger: GCTTGTTGCTCTGCAGTTCCAGAAGGCGTCCCGGGT...GACTCGGTTTAATCTTGTCTCATGAATTTCCAGATGGCCCACTCTCTTCCATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp GTGAATTTTGTCTTCGATGCACTTCTTCAGAAGCTCTCCCTTGCTTTTACTCTTTTCCTCTCCAACTCCTaGAGCTCCCGGCTGTGCGAC +
Preference number: 4 (lower is better)
Translates to: VNFVFDALLQKLSLAFTLFLSNS*SSRLCD
Trigger: GTCGCACAGCCGGGAGCTCCAGGAGTTGGAGAGGAA...AAGAGTAAAAGCAAGGGAGAGCTTCTGAAGAAGTGCATCGAAGACAAAATTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CCA 90 bp ATATGGAAGAGAGTGGGCCATCTGGAAATTCATGAGACAAGATTAAACCGAGTCGAGGCTGTGAGGCTGTaGGCAGTACCACACTCAGGA +
Preference number: 4 (lower is better)
Translates to: IWKRVGHLEIHETRLNRVEAVRL*AVPHSG
Trigger: TCCTGAGTGTGGTACTGCCCACAGCCTCACAGCCTC...GACTCGGTTTAATCTTGTCTCATGAATTTCCAGATGGCCCACTCTCTTCCATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
3UTR CAA 72 bp TCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATaGCACTGCTCAGTCCGAGGTAACTCATCTATGTTT +
Preference number: 4 (lower is better)
Translates to: SRAILRKQRLQR*HCSVRGNSSMF
Trigger: AAACATAGATGAGTTACCTCGGACTGAGCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR TCA 90 bp GGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGAAAGCAAATAAGGAATaGGCCCATGGCCCACTAGAG +
Preference number: 4 (lower is better)
Translates to: GGGAERRSVYVLVIWKRVKANKE*AHGPLE
Trigger: CTCTAGTGGGCCATGGGCTCATTCCTTATTTGCTTT...CACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp GGCCATCTGGAAATTCATGAGACAAGATTAAACCGAGTCCCTGCAAGTTGGCATCCCTTGAACTTCTCTTaGAATGTCCCCATACAGGCG +
Preference number: 4 (lower is better)
Translates to: GHLEIHETRLNRVPASWHPLNFS*NVPIQA
Trigger: CGCCTGTATGGGGACATTTCAAGAGAAGTTCAAGGG...ATGCCAACTTGCAGGGACTCGGTTTAATCTTGTCTCATGAATTTCCAGATGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp CAACTTCCTTTTCCAGAGAATATCATCCTCTCTCTGAGAGGGAGACATGTCTTCCTGTGTTCTGTTCCGTaGCGAGCTCTGAAAGGTGAG +
Preference number: 4 (lower is better)
Translates to: QLPFPENIILSLRGRHVFLCSVP*RALKGE
Trigger: CTCACCTTTCAGAGCTCGTCACGGAACAGAACACAG...GAAGACATGTCTCCCTCTCAGAGAGAGGATGATATTCTCTGGAAAAGGAAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR TCA 90 bp CAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAAACTCTTCTAAGGCTTaGAGCATGCTCCCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: QNIRVENLAVTTQTIASANSSKA*SMLPGS
Trigger: GGACCCTGGGAGCATGCTTCAAGCCTTAGAAGAGTT...TGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp GTTGTGCATTATAAACACACAAACACCGGCGGGCAGGAGAAAATCATCCCTTCTACAGCCAGCTGTCTGTaGGCTTTGGCAAAGTCTTCT +
Preference number: 4 (lower is better)
Translates to: VVHYKHTNTGGQEKIIPSTASCL*ALAKSS
Trigger: AGAAGACTTTGCCAAAGCTCACAGACAGCTGGCTGT...AGAAGGGATGATTTTCTCCTGCCCGCCGGTGTTTGTGTGTTTATAATGCACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp GGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGGAAAAGACTTCTGTCTaGGCCCGCTCCAATAGCATT +
Preference number: 4 (lower is better)
Translates to: GGGAERRSVYVLVIWKRVEKTSV*ARSNSI
Trigger: AATGCTATTGGAGCGGGCTCAGACAGAAGTCTTTTC...CACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp TGGGGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGAAAAGACTTCTGTCTaGGCCCGCTCCAATAGCATT +
Preference number: 4 (lower is better)
Translates to: WGGGAERRSVYVLVIWKREKTSV*ARSNSI
Trigger: AATGCTATTGGAGCGGGCTCAGACAGAAGTCTTTTC...TCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp GATTGCACTGCTCAGTCCGAGGTAACTCATCTATGTTTGGGACAAACTTGCAGGTTTACTCTTGGACCGTaGCTTTCTCACCTTGGACTG +
Preference number: 4 (lower is better)
Translates to: DCTAQSEVTHLCLGQTCRFTLGP*LSHLGL
Trigger: CAGTCCAAGGTGAGAAAGTCACGGTCCAAGAGTAAA...CCTGCAAGTTTGTCCCAAACATAGATGAGTTACCTCGGACTGAGCAGTGCAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR TCA 90 bp GGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGGTGTTTATGTCCTTGTaGTATGGAAGAGAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: GGGAERRSVYVLVIWKRVVFMSL*YGREWA
Trigger: GGCCCACTCTCTTCCATATCACAAGGACATAAACAC...CACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp ATATGGAAGAGAGTGGGCCATCTGGAAATTCATGAGACAAGATTAAACCGAGTCGACAGGGATTTGCTTTaGCAAGGGACGCAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: IWKRVGHLEIHETRLNRVDRDLL*QGTQEE
Trigger: CTCCTCCTGCGTCCCTTGGCAAAGCAAATCCCTGTC...GACTCGGTTTAATCTTGTCTCATGAATTTCCAGATGGCCCACTCTCTTCCATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310917.6
CDS-3UTR GCA 90 bp GTAACAAATACAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATGCGTGGAGGCCGTGGTaGGGCAGAACCGTTACGTTT +
Preference number: 4 (lower is better)
Translates to: VTNTKHKSRESGCHHTDHAWRPW*GRTVTF
Trigger: AAACGTAACGGTTCTGCCGCACCACGGCCTCCACGC...ATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTGTATTTGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp AGGCTCCAACGATTGCACTGCTCAGTCCGAGGTAACTCATCTATGTTTGGGACAACATTCAGCTGTCAATaGCACCATCTTCCGATCGTA +
Preference number: 4 (lower is better)
Translates to: RLQRLHCSVRGNSSMFGTTFSCQ*HHLPIV
Trigger: TACGATCGGAAGATGGTGGCATTGACAGCTGAATGT...TGTCCCAAACATAGATGAGTTACCTCGGACTGAGCAGTGCAATCGTTGGAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp AGTCCATGCCCAAGGCCCTCATGGCCTTTTTGGCATTCAAAAAGTTCTTCTTTTAGAGACTTCCTCAAGTaGTCCTGTTCCAGGCCATGG +
Preference number: 4 (lower is better)
Translates to: SPCPRPSWPFWHSKSSSFRDFLK*SCSRPW
Trigger: CCATGGCCTGGAACAGGAGCACTTGAGGAAGTCTCT...AAAAGAAGAACTTTTTGAATGCCAAAAAGGCCATGAGGGCCTTGGGCATGGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp TTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTGCTCAAGTCTTCTTCTTGTTaGAAAGCGAGAGACTTCCTC +
Preference number: 4 (lower is better)
Translates to: LVFQGHITQTEAPTIALLKSSSC*KARDFL
Trigger: GAGGAAGTCTCTCGCTTTGCAACAAGAAGAAGACTT...GAGCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp TGGGGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGATCAGAAGCTCTCCCTTaGTTTTACTCTTGGACCGTG +
Preference number: 4 (lower is better)
Translates to: WGGGAERRSVYVLVIWKRSEALP*FYSWTV
Trigger: CACGGTCCAAGAGTAAAAGCAAGGGAGAGCTTCTGA...TCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp AAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATCTGGCTGCACAGGGTTaGAAAGGTGTCTGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: KKECLCPCDMEESGPSGNLAAQG*KGVCLH
Trigger: ATGGAGGCAGACACCTTTGCAACCCTGTGCAGCCAG...ATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp CAACTTCCTTTTCCAGAGAATATCATCCTCTCTCTGAGAGGGAGACATGTCTTCGATCTCCTCGCAGTTTaGCATCTAAGGCTTGCCACC +
Preference number: 4 (lower is better)
Translates to: QLPFPENIILSLRGRHVFDLLAV*HLRLAT
Trigger: GGTGGCAAGCCTTAGATGGCAAACTGCGAGGAGATC...GAAGACATGTCTCCCTCTCAGAGAGAGGATGATATTCTCTGGAAAAGGAAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp GTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTGCTCAGTCCTCTTTTCTAATCCTCTaGTTATCAGATCTCCTCGCA +
Preference number: 4 (lower is better)
Translates to: VPGPYYANRGSNDCTAQSSFLIL*LSDLLA
Trigger: TGCGAGGAGATCTGATAAGCAGAGGATTAGAAAAGA...GGACTGAGCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp CCAGCTTCACGAACTCTGCTTCTCGCCACGCAGTCTGAAATTGCTGCAGCAGAATCTTTTCTAATCCTCTaGTTATCAGATCTCCTCGCA +
Preference number: 4 (lower is better)
Translates to: PASRTLLLATQSEIAAAESFLIL*LSDLLA
Trigger: TGCGAGGAGATCTGATAAGCAGAGGATTAGAAAAGA...TTCTGCTGCAGCAATTTCAGACTGCGTGGCGAGAAGCAGAGTTCGTGAAGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp AAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATTTCCTGGGAGGAACGTaGAGTGAGATCTCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: KKECLCPCDMEESGPSGNFLGGT*SEISGS
Trigger: GGAGCCAGAGATCTCACTGCACGTTCCTCCCAGGAA...ATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp GAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTGTGTGTGCCTTCTGCATGTaGAATTTATATTTGCGAGTT +
Preference number: 4 (lower is better)
Translates to: ESGCHHTDHSFCSRGWGVCAFCM*NLYLRV
Trigger: AACTCGCAAATATAAATTGCACATGCAGAAGGCACA...CACACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp CTTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTGCTCAATTTCATTCCAAGTaGTGCTTCCACTGCAGTCTT +
Preference number: 4 (lower is better)
Translates to: LGVPGPYYANRGSNDCTAQFHSK*CFHCSL
Trigger: AAGACTGCAGTGGAAGCACCACTTGGAATGAAATTG...AGCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CCA 90 bp GGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTGCTCAGTCCGAGGTACATTTTAGCTGCCTCTaGTTTCAATTCCCCTTTGAA +
Preference number: 4 (lower is better)
Translates to: GPYYANRGSNDCTAQSEVHFSCL*FQFPFE
Trigger: TTCAAAGGGGAATTGAAACCAGAGGCAGCTAAAATG...TACCTCGGACTGAGCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CCA 90 bp CTTGCTCAGGGCTTGGTGCAGGACAGTAGAGACCTGCCTTTCAGAATCCACCTCTACCTCTTACTAGCCTaGAAAAAGTCCATTAACTCT +
Preference number: 4 (lower is better)
Translates to: LAQGLVQDSRDLPFRIHLYLLLA*KKSINS
Trigger: AGAGTTAATGGACTTTTTCCAGGCTAGTAAGAGGTA...GAGGTGGATTCTGAAAGGCAGGTCTCTACTGTCCTGCACCAAGCCCTGAGCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CCA 90 bp TCCAACGATTGCACTGCTCAGTCCGAGGTAACTCATCTATGTTTGGGACAAACTCGGGTCTCTGATGACTaGAGGTTCTGGACCAGATAT +
Preference number: 4 (lower is better)
Translates to: SNDCTAQSEVTHLCLGQTRVSDD*RFWTRY
Trigger: ATATCTGGTCCAGAACCTCCAGTCATCAGAGACCCG...AGTTTGTCCCAAACATAGATGAGTTACCTCGGACTGAGCAGTGCAATCGTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CCA 90 bp GTAACAAATACAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATGGGCCAGTTCGCCAATaGGCTCCAGTGACAGGTGTG +
Preference number: 4 (lower is better)
Translates to: VTNTKHKSRESGCHHTDHGPVRQ*APVTGV
Trigger: CACACCTGTCACTGGAGCCCATTGGCGAACTGGCCC...ATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTGTATTTGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp GGCCATCTGGAAATTCATGAGACAAGATTAAACCGAGTCCCTGCAAGTTGGCATAAAGCAAATAAGGAATaGGCCCATGGCCCACTAGAG +
Preference number: 4 (lower is better)
Translates to: GHLEIHETRLNRVPASWHKANKE*AHGPLE
Trigger: CTCTAGTGGGCCATGGGCTCATTCCTTATTTGCTTT...ATGCCAACTTGCAGGGACTCGGTTTAATCTTGTCTCATGAATTTCCAGATGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp CTTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTGCTTTTTCAGAAGTCCCTTaGACTTCTCTTGAAATGTCC +
Preference number: 4 (lower is better)
Translates to: LGVPGPYYANRGSNDCTAFSEVP*TSLEMS
Trigger: GGACATTTCAAGAGAAGTTCAAGGGACTTCTGAAAA...AGCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR TCA 90 bp ATATGGAAGAGAGTGGGCCATCTGGAAATTCATGAGACAAGATTAAACCGAGTCCTGTGTTCTGTTCCGTaGCGAGCTCTGAAAGGTGAG +
Preference number: 4 (lower is better)
Translates to: IWKRVGHLEIHETRLNRVLCSVP*RALKGE
Trigger: CTCACCTTTCAGAGCTCGTCACGGAACAGAACACAG...GACTCGGTTTAATCTTGTCTCATGAATTTCCAGATGGCCCACTCTCTTCCATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp GTGAATTTTGTCTTCGATGCACTTCTTCAGAAGCTCTCCCTTGCTTTTACTCTTTCTCGTGCTTCTGAATaGGGTGAGTCAGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: VNFVFDALLQKLSLAFTLSRASE*GESAGL
Trigger: CAGCCCAGCTGACTCACCTCATTCAGAAGCACGAGA...AAGAGTAAAAGCAAGGGAGAGCTTCTGAAGAAGTGCATCGAAGACAAAATTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR TCA 90 bp GGCCATCTGGAAATTCATGAGACAAGATTAAACCGAGTCCCTGCAAGTTGGCATTTTACTCTTGGACCGTaGCTTTCTCACCTTGGACTG +
Preference number: 4 (lower is better)
Translates to: GHLEIHETRLNRVPASWHFTLGP*LSHLGL
Trigger: CAGTCCAAGGTGAGAAAGTCACGGTCCAAGAGTAAA...ATGCCAACTTGCAGGGACTCGGTTTAATCTTGTCTCATGAATTTCCAGATGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp GTAACAAATACAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATGAGGGGACAGGGATTTaGTTTGCCAAGGGACGCAGG +
Preference number: 4 (lower is better)
Translates to: VTNTKHKSRESGCHHTDHEGTGI*FAKGRR
Trigger: CCTGCGTCCCTTGGCAAAGCAAATCCCTGTCCCCTC...ATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTGTATTTGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310917.6
CDS-3UTR GCA 90 bp CTTCCTTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACAAGGCATCTCCCACTTaGAGAAACTTCTTGCTAAAA +
Preference number: 4 (lower is better)
Translates to: LPWCSRAILRKQRLQRLHKASPT*RNFLLK
Trigger: TTTTAGCAAGAAGTTTCTGCAAGTGGGAGATGCCTT...GTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAAGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp CAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCACTCCAGATCTGCATCTaGCCGATTCAGGGTTGCAAT +
Preference number: 4 (lower is better)
Translates to: QNIRVENLAVTTQTIASALQICI*PIQGCN
Trigger: ATTGCAACCCTGAATCGGGCAGATGCAGATCTGGAG...TGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp GTAACAAATACAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATGGGTCCGCAGAAGGTTaGTGCACTCTACAGCAGACC +
Preference number: 4 (lower is better)
Translates to: VTNTKHKSRESGCHHTDHGSAEG*CTLQQT
Trigger: GGTCTGCTGTAGAGTGCAGCAACCTTCTGCGGACCC...ATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTGTATTTGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp AAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATAGAGACTTCCTCAAGTaGTCCTGTTCCAGGCCATGG +
Preference number: 4 (lower is better)
Translates to: KKECLCPCDMEESGPSGNRDFLK*SCSRPW
Trigger: CCATGGCCTGGAACAGGAGCACTTGAGGAAGTCTCT...ATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp AAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATTTCATGAAGATCAGGTaGTCCCAGCGTCGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: KKECLCPCDMEESGPSGNFMKIR*SQRRSS
Trigger: AGAGCTGCGACGCTGGGAGCACCTGATCTTCATGAA...ATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp CAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCATTGCCATCTAAGGCTTaGCACCAGCTCTGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: QNIRVENLAVTTQTIASALPSKA*HQLWCF
Trigger: GAAACACCAGAGCTGGTGGCAAGCCTTAGATGGCAA...TGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp AAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATGATCTCCTCGCAGTTTaGCATCTAAGGCTTGCCACC +
Preference number: 4 (lower is better)
Translates to: KKECLCPCDMEESGPSGNDLLAV*HLRLAT
Trigger: GGTGGCAAGCCTTAGATGGCAAACTGCGAGGAGATC...ATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp TATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATTCATGAGACAAGACCTTCTCTCTTCAGATaGTCCCGCAGGTCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: YVLVIWKRVGHLEIHETRPSLFR*SRRSFP
Trigger: AGGGAAAGACCTGCGGGAGCATCTGAAGAGAGAAGG...TCTTGTCTCATGAATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp ATATGGAAGAGAGTGGGCCATCTGGAAATTCATGAGACAAGATTAAACCGAGTCCCTTCTCTCTTCAGATaGTCCCGCAGGTCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: IWKRVGHLEIHETRLNRVPSLFR*SRRSFP
Trigger: AGGGAAAGACCTGCGGGAGCATCTGAAGAGAGAAGG...GACTCGGTTTAATCTTGTCTCATGAATTTCCAGATGGCCCACTCTCTTCCATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp GTTGTGCATTATAAACACACAAACACCGGCGGGCAGGAGAAAATCATCCCTTCTTTCTTGCTAAAAGCCTaGAATCCTTCCGAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: VVHYKHTNTGGQEKIIPSFLLKA*NPSEVL
Trigger: CAGGACCTCGGAAGGATTCCAGGCTTTTAGCAAGAA...AGAAGGGATGATTTTCTCCTGCCCGCCGGTGTTTGTGTGTTTATAATGCACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp CTTCCTTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACAGAATGTCTATCATTTaGTCGTTAAGGGAAAGGTCC +
Preference number: 4 (lower is better)
Translates to: LPWCSRAILRKQRLQRLHRMSII*SLRERS
Trigger: GGACCTTTCCCTTAACGACCAAATGATAGACATTCT...GTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAAGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CCA 90 bp CTTTCCCTTGGGCTAGTCCATGCCCAAGGCCCTCATGGCCTTTTTGGCATTCAAACCAGATATTCCCTGTaGCCAAATCTTTTACTTAGA +
Preference number: 4 (lower is better)
Translates to: LSLGLVHAQGPHGLFGIQTRYSL*PNLLLR
Trigger: TCTAAGTAAAAGATTTGGCCACAGGGAATATCTGGT...TTGAATGCCAAAAAGGCCATGAGGGCCTTGGGCATGGACTAGCCCAAGGGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CCA 90 bp GTGAATTTTGTCTTCGATGCACTTCTTCAGAAGCTCTCCCTTGCTTTTACTCTTTTCTGGTGCAGGTACTaGCCGGCATCCTCAACCGTT +
Preference number: 4 (lower is better)
Translates to: VNFVFDALLQKLSLAFTLFWCRY*PASSTV
Trigger: AACGGTTGAGGATGCCGGCCAGTACCTGCACCAGAA...AAGAGTAAAAGCAAGGGAGAGCTTCTGAAGAAGTGCATCGAAGACAAAATTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CCA 90 bp GTAACAAATACAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATACCCGGGACGCCTTCTaGAACTGCAGAGCAACAAGC +
Preference number: 4 (lower is better)
Translates to: VTNTKHKSRESGCHHTDHTRDAF*NCRATS
Trigger: GCTTGTTGCTCTGCAGTTCCAGAAGGCGTCCCGGGT...ATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTGTATTTGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp GTAACAAATACAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATCGCAGGTCTTTCCCTTaGGCTAGTCCATGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: VTNTKHKSRESGCHHTDHRRSFP*ASPCPR
Trigger: CCTTGGGCATGGACTAGCCCAAGGGAAAGACCTGCG...ATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTGTATTTGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp GGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGTATGTCCTTGTGATATaGAAGAGAGTGGGCCATCTG +
Preference number: 4 (lower is better)
Translates to: GGGAERRSVYVLVIWKRVYVLVI*KRVGHL
Trigger: CAGATGGCCCACTCTCTTCCATATCACAAGGACATA...CACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
3UTR CAA 72 bp TTTTCTAATCCTCTGCTTATCAGATCTCCTCGCAGTTaGCCATCTAAGGCTTGCCACCAGCTCTGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: FSNPLLIRSPRS*PSKACHQLWCF
Trigger: GAAACACCAGAGCTGGTGGCAAGCCTTAGATGGCAAACTGCGAGGAGATCTGATAAGCAGAGGATTAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR TCA 90 bp GTAACAAATACAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATATTCACGCCATCAGCTaGGGTGAACGGCAAGGGTTC +
Preference number: 4 (lower is better)
Translates to: VTNTKHKSRESGCHHTDHIHAIS*GERQGF
Trigger: GAACCCTTGCCGTTCACCTCAGCTGATGGCGTGAAT...ATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTGTATTTGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp CAGTTGTCAGGATTGGCTCCTCCAAGTCATCCTCGTCATGAGGGCCATGACATTAATCTTTTACTTAGATaGTACCTCTTACTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: QLSGLAPPSHPRHEGHDINLLLR*YLLLAW
Trigger: CCAGGCTAGTAAGAGGTATCATCTAAGTAAAAGATT...AATGTCATGGCCCTCATGACGAGGATGACTTGGAGGAGCCAATCCTGACAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR TCA 90 bp GTAACAAATACAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATAAGCTCCTGTCCATCTaGGCAAAGCAGCCATGGACC +
Preference number: 4 (lower is better)
Translates to: VTNTKHKSRESGCHHTDHKLLSI*AKQPWT
Trigger: GGTCCATGGCTGCTTTGCTCAGATGGACAGGAGCTT...ATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTGTATTTGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp GGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGCGACCCAGACACCAGTaGACATTTCTGAAAAATTAC +
Preference number: 4 (lower is better)
Translates to: GGGAERRSVYVLVIWKRVRPRHQ*TFLKNY
Trigger: GTAATTTTTCAGAAATGTGCACTGGTGTCTGGGTCG...CACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp AGAAAATCATCCCTTCTCTCTTCAGATGCTCCCGCAGGTCTTTCCCTTGGGCTAAAGGCATCTCCCACTTaGAGAAACTTCTTGCTAAAA +
Preference number: 4 (lower is better)
Translates to: RKSSLLSSDAPAGLSLGLKASPT*RNFLLK
Trigger: TTTTAGCAAGAAGTTTCTGCAAGTGGGAGATGCCTT...TAGCCCAAGGGAAAGACCTGCGGGAGCATCTGAAGAGAGAAGGGATGATTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp GTAACAAATACAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATCTAAGGCTTGAAGCATaGTCCCAGGGTCCTCGGAAG +
Preference number: 4 (lower is better)
Translates to: VTNTKHKSRESGCHHTDHLRLEA*SQGPRK
Trigger: CTTCCGAGGACCCTGGGAGCATGCTTCAAGCCTTAG...ATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTGTATTTGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp TTGTCAGGATTGGCTCCTCCAAGTCATCCTCGTCATGAGGGCCATGACATTGTGTCCAGCAATAGAAACTaGTTTTTGAAAACAGCACTC +
Preference number: 4 (lower is better)
Translates to: LSGLAPPSHPRHEGHDIVSSNRN*FLKTAL
Trigger: GAGTGCTGTTTTCAAAAAGCAGTTTCTATTGCTGGA...CACAATGTCATGGCCCTCATGACGAGGATGACTTGGAGGAGCCAATCCTGACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp GTAACAAATACAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATTCATCCTTCAGTCTCTaGCTCACGCTCTGGACACCC +
Preference number: 4 (lower is better)
Translates to: VTNTKHKSRESGCHHTDHSSFSL*LTLWTP
Trigger: GGGTGTCCAGAGCGTGAGGCAGAGACTGAAGGATGA...ATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTGTATTTGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp CACCAGGTCTTCAGAGGCCTGTTCCTCACAGAGGTGAATTTTGTCTTCGATGCAGAATTTTGTCTTCGATaGACTTCTTCAGAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: HQVFRGLFLTEVNFVFDAEFCLR*TSSEAL
Trigger: GAGAGCTTCTGAAGAAGTGCATCGAAGACAAAATTC...TGCATCGAAGACAAAATTCACCTCTGTGAGGAACAGGCCTCTGAAGACCTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp TATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATTCATGAGACAAGAATTAAACCGAGTCCCTaGAAGTTGGCATGCGCTACG +
Preference number: 4 (lower is better)
Translates to: YVLVIWKRVGHLEIHETRIKPSP*KLACAT
Trigger: CGTAGCGCATGCCAACTTGCAGGGACTCGGTTTAAT...TCTTGTCTCATGAATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp AAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATTTTCCTGACCTAACATaGACAAGGCCATGGGGTTCG +
Preference number: 4 (lower is better)
Translates to: KKECLCPCDMEESGPSGNFPDLT*TRPWGS
Trigger: CGAACCCCATGGCCTTGTCCATGTTAGGTCAGGAAA...ATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310917.6
CDS-3UTR CCA 90 bp AGTCCATGCCCAAGGCCCTCATGGCCTTTTTGGCATTCAAAAAGTTCTTCTTTTATTTTTCTCTCTACTTaGGGTGAGAGGTGGCCACTG +
Preference number: 4 (lower is better)
Translates to: SPCPRPSWPFWHSKSSSFIFLST*GERWPL
Trigger: CAGTGGCCACCTCTCACCCCAAGTAGAGAGAAAAAT...AAAAGAAGAACTTTTTGAATGCCAAAAAGGCCATGAGGGCCTTGGGCATGGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CCA 90 bp TGGCTGCACAGGGTTGCAAAGGTGTCTGCCTCCATGTTTTCCAACAAGTCTTCTAATAGCATTTCCATTTaGTCTTCATCCAGGTACCCT +
Preference number: 4 (lower is better)
Translates to: WLHRVAKVSASMFSNKSSNSISI*SSSRYP
Trigger: AGGGTACCTGGATGAAGACCAAATGGAAATGCTATT...AGAAGACTTGTTGGAAAACATGGAGGCAGACACCTTTGCAACCCTGTGCAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR TCA 90 bp AAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATACTGCAGTCTTAAAGTaGCAGCATTCCACTTTGGGC +
Preference number: 4 (lower is better)
Translates to: KKECLCPCDMEESGPSGNTAVLK*QHSTLG
Trigger: GCCCAAAGTGGAATGCTGTCACTTTAAGACTGCAGT...ATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp GTAACAAATACAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATAACTCTTCTAAGGCTTaGAGCATGCTCCCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: VTNTKHKSRESGCHHTDHNSSKA*SMLPGS
Trigger: GGACCCTGGGAGCATGCTTCAAGCCTTAGAAGAGTT...ATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTGTATTTGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp ATATGGAAGAGAGTGGGCCATCTGGAAATTCATGAGACAAGATTAAACCGAGTCTTTACTCTTGGACCGTaGCTTTCTCACCTTGGACTG +
Preference number: 4 (lower is better)
Translates to: IWKRVGHLEIHETRLNRVFTLGP*LSHLGL
Trigger: CAGTCCAAGGTGAGAAAGTCACGGTCCAAGAGTAAA...GACTCGGTTTAATCTTGTCTCATGAATTTCCAGATGGCCCACTCTCTTCCATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp CAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCATGTTCCTCACAGAGGTaGATTTTGTCTTCGATGCAC +
Preference number: 4 (lower is better)
Translates to: QNIRVENLAVTTQTIASACSSQR*ILSSMH
Trigger: GTGCATCGAAGACAAAATTCACCTCTGTGAGGAACA...TGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp CAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCATCTCTCAAACACTGCTaGTGTTGCTCCAGTAATGTC +
Preference number: 4 (lower is better)
Translates to: QNIRVENLAVTTQTIASASLKHC*CCSSNV
Trigger: GACATTACTGGAGCAACATCAGCAGTGTTTGAGAGA...TGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp CAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAAAGTGGTGCTTCCACTaGAGTCTTAAAGTGACAGCA +
Preference number: 4 (lower is better)
Translates to: QNIRVENLAVTTQTIASAKWCFH*SLKVTA
Trigger: TGCTGTCACTTTAAGACTGCAGTGGAAGCACCACTT...TGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp GATTGCACTGCTCAGTCCGAGGTAACTCATCTATGTTTGGGACAAACTTGCAGGTTTCATTCCAAGTGGTaGTTCCACTGCAGTCTTAAA +
Preference number: 4 (lower is better)
Translates to: DCTAQSEVTHLCLGQTCRFHSKW*FHCSLK
Trigger: TTTAAGACTGCAGTGGAAGCACCACTTGGAATGAAA...CCTGCAAGTTTGTCCCAAACATAGATGAGTTACCTCGGACTGAGCAGTGCAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR GCA 90 bp GTAACAAATACAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATACAAGCCTCCAGATCTaGATCTGCCCGATTCAGGGT +
Preference number: 4 (lower is better)
Translates to: VTNTKHKSRESGCHHTDHTSLQI*ICPIQG
Trigger: ACCCTGAATCGGGCAGATGCAGATCTGGAGGCTTGT...ATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTGTATTTGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp GGCCATCTGGAAATTCATGAGACAAGATTAAACCGAGTCCCTGCAAGTTGGCATTTTCAGCAACTCTTCTaGTTCCTCCATTGCCATCAT +
Preference number: 4 (lower is better)
Translates to: GHLEIHETRLNRVPASWHFQQLF*FLHCHH
Trigger: ATGATGGCAATGGAGGAAGCAGAAGAGTTGCTGAAA...ATGCCAACTTGCAGGGACTCGGTTTAATCTTGTCTCATGAATTTCCAGATGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp GTTGTGCATTATAAACACACAAACACCGGCGGGCAGGAGAAAATCATCCCTTCTTTTCAGCAACTCTTCTaGTTCCTCCATTGCCATCAT +
Preference number: 4 (lower is better)
Translates to: VVHYKHTNTGGQEKIIPSFQQLF*FLHCHH
Trigger: ATGATGGCAATGGAGGAAGCAGAAGAGTTGCTGAAA...AGAAGGGATGATTTTCTCCTGCCCGCCGGTGTTTGTGTGTTTATAATGCACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp TTTTTCCTGGGAGGAACGTGCAGTGAGATCTCTGGCTCCTTTGGATTTCTGAATTTTCAGCAACTCTTCTaGTTCCTCCATTGCCATCAT +
Preference number: 4 (lower is better)
Translates to: FFLGGTCSEISGSFGFLNFQQLF*FLHCHH
Trigger: ATGATGGCAATGGAGGAAGCAGAAGAGTTGCTGAAA...ATTCAGAAATCCAAAGGAGCCAGAGATCTCACTGCACGTTCCTCCCAGGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp GTAACAAATACAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATGACGCCTTCTGGAACTaGAGAGCAACAAGCGACTGT +
Preference number: 4 (lower is better)
Translates to: VTNTKHKSRESGCHHTDHDAFWN*RATSDC
Trigger: ACAGTCGCTTGTTGCTCTGCAGTTCCAGAAGGCGTC...ATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTGTATTTGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp GGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGTCTTTTCTAATCCTCTaGTTATCAGATCTCCTCGCA +
Preference number: 4 (lower is better)
Translates to: GGGAERRSVYVLVIWKRVSFLIL*LSDLLA
Trigger: TGCGAGGAGATCTGATAAGCAGAGGATTAGAAAAGA...CACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp GGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGATGTCTTCTTTAATATaGTCTGCTTTCTCTTGCGGG +
Preference number: 4 (lower is better)
Translates to: GGGAERRSVYVLVIWKRVMSSLI*SAFSCG
Trigger: CCCGCAAGAGAAAGCAGAGCATATTAAAGAAGACAT...CACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp GGCCATCTGGAAATTCATGAGACAAGATTAAACCGAGTCCCTGCAAGTTGGCATGGGGTCTGTGCCTTCTaGATGTGCAATTTATATTTG +
Preference number: 4 (lower is better)
Translates to: GHLEIHETRLNRVPASWHGVCAF*MCNLYL
Trigger: CAAATATAAATTGCACATGCAGAAGGCACAGACCCC...ATGCCAACTTGCAGGGACTCGGTTTAATCTTGTCTCATGAATTTCCAGATGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp TATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATTCATGAGACAAGATTCTTGCTAAAAGCCTaGAATCCTTCCGAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: YVLVIWKRVGHLEIHETRFLLKA*NPSEVL
Trigger: CAGGACCTCGGAAGGATTCCAGGCTTTTAGCAAGAA...TCTTGTCTCATGAATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp TATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATTCATGAGACAAGAATTTTTCTCTCTACTTaGGGTGAGAGGTGGCCACTG +
Preference number: 4 (lower is better)
Translates to: YVLVIWKRVGHLEIHETRIFLST*GERWPL
Trigger: CAGTGGCCACCTCTCACCCCAAGTAGAGAGAAAAAT...TCTTGTCTCATGAATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp GGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGAATAGCATTTCCATTTaGTCTTCATCCAGGTACCCT +
Preference number: 4 (lower is better)
Translates to: GGGAERRSVYVLVIWKRVNSISI*SSSRYP
Trigger: AGGGTACCTGGATGAAGACCAAATGGAAATGCTATT...CACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp GTAACAAATACAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATTGCTCCAGTAATGTCTaGCTCTTGCTCAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: VTNTKHKSRESGCHHTDHCSSNV*LLLRAW
Trigger: CCAAGCCCTGAGCAAGAGCCAGACATTACTGGAGCA...ATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTGTATTTGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp CAACTTCCTTTTCCAGAGAATATCATCCTCTCTCTGAGAGGGAGACATGTCTTCAGTTCTTCTTTTTCCTaGGAGGAACGTGCAGTGAGA +
Preference number: 4 (lower is better)
Translates to: QLPFPENIILSLRGRHVFSSSFS*EERAVR
Trigger: TCTCACTGCACGTTCCTCCCAGGAAAAAGAAGAACT...GAAGACATGTCTCCCTCTCAGAGAGAGGATGATATTCTCTGGAAAAGGAAGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CCA 90 bp ATATGGAAGAGAGTGGGCCATCTGGAAATTCATGAGACAAGATTAAACCGAGTCTGCCCAAGGCCCTCATaGCCTTTTTGGCATTCAAAA +
Preference number: 4 (lower is better)
Translates to: IWKRVGHLEIHETRLNRVCPRPS*PFWHSK
Trigger: TTTTGAATGCCAAAAAGGCCATGAGGGCCTTGGGCA...GACTCGGTTTAATCTTGTCTCATGAATTTCCAGATGGCCCACTCTCTTCCATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp GGCCATCTGGAAATTCATGAGACAAGATTAAACCGAGTCCCTGCAAGTTGGCATTTTTCAGAAGTCCCTTaGACTTCTCTTGAAATGTCC +
Preference number: 4 (lower is better)
Translates to: GHLEIHETRLNRVPASWHFSEVP*TSLEMS
Trigger: GGACATTTCAAGAGAAGTTCAAGGGACTTCTGAAAA...ATGCCAACTTGCAGGGACTCGGTTTAATCTTGTCTCATGAATTTCCAGATGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp GGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGAATCTTTTACTTAGATaGTACCTCTTACTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: GGGAERRSVYVLVIWKRVNLLLR*YLLLAW
Trigger: CCAGGCTAGTAAGAGGTATCATCTAAGTAAAAGATT...CACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp GTGAATTTTGTCTTCGATGCACTTCTTCAGAAGCTCTCCCTTGCTTTTACTCTTTTTACTCTTGGACCGTaGCTTTCTCACCTTGGACTG +
Preference number: 4 (lower is better)
Translates to: VNFVFDALLQKLSLAFTLFTLGP*LSHLGL
Trigger: CAGTCCAAGGTGAGAAAGTCACGGTCCAAGAGTAAA...AAGAGTAAAAGCAAGGGAGAGCTTCTGAAGAAGTGCATCGAAGACAAAATTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR TCA 90 bp AAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATATATCATCCTCTCTCTaGGAGGGAGACATGTCTTCT +
Preference number: 4 (lower is better)
Translates to: KKECLCPCDMEESGPSGNISSSL*EGDMSS
Trigger: AGAAGACATGTCTCCCTCTCAGAGAGAGGATGATAT...ATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp AAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATAAGTGGTGCTTCCACTaGAGTCTTAAAGTGACAGCA +
Preference number: 4 (lower is better)
Translates to: KKECLCPCDMEESGPSGNKWCFH*SLKVTA
Trigger: TGCTGTCACTTTAAGACTGCAGTGGAAGCACCACTT...ATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp GGCCATCTGGAAATTCATGAGACAAGATTAAACCGAGTCCCTGCAAGTTGGCATTTTCATTCCAAGTGGTaGTTCCACTGCAGTCTTAAA +
Preference number: 4 (lower is better)
Translates to: GHLEIHETRLNRVPASWHFHSKW*FHCSLK
Trigger: TTTAAGACTGCAGTGGAAGCACCACTTGGAATGAAA...ATGCCAACTTGCAGGGACTCGGTTTAATCTTGTCTCATGAATTTCCAGATGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp GTTGTGCATTATAAACACACAAACACCGGCGGGCAGGAGAAAATCATCCCTTCTAAGGCATCTCCCACTTaGAGAAACTTCTTGCTAAAA +
Preference number: 4 (lower is better)
Translates to: VVHYKHTNTGGQEKIIPSKASPT*RNFLLK
Trigger: TTTTAGCAAGAAGTTTCTGCAAGTGGGAGATGCCTT...AGAAGGGATGATTTTCTCCTGCCCGCCGGTGTTTGTGTGTTTATAATGCACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp TATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATTCATGAGACAAGATTCTTTAATATGCTCTaGTTTCTCTTGCGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: YVLVIWKRVGHLEIHETRFFNML*FLLRAH
Trigger: GTGGGCCCGCAAGAGAAAGCAGAGCATATTAAAGAA...TCTTGTCTCATGAATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp GGCCATCTGGAAATTCATGAGACAAGATTAAACCGAGTCCCTGCAAGTTGGCATATGTCTTCTTTAATATaGTCTGCTTTCTCTTGCGGG +
Preference number: 4 (lower is better)
Translates to: GHLEIHETRLNRVPASWHMSSLI*SAFSCG
Trigger: CCCGCAAGAGAAAGCAGAGCATATTAAAGAAGACAT...ATGCCAACTTGCAGGGACTCGGTTTAATCTTGTCTCATGAATTTCCAGATGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp GGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGTGTGCCTTCTGCATGTaGAATTTATATTTGCGAGTT +
Preference number: 4 (lower is better)
Translates to: GGGAERRSVYVLVIWKRVCAFCM*NLYLRV
Trigger: AACTCGCAAATATAAATTGCACATGCAGAAGGCACA...CACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp CAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCACAATTTCATTCCAAGTaGTGCTTCCACTGCAGTCTT +
Preference number: 4 (lower is better)
Translates to: QNIRVENLAVTTQTIASAQFHSK*CFHCSL
Trigger: AAGACTGCAGTGGAAGCACCACTTGGAATGAAATTG...TGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp GGCCATCTGGAAATTCATGAGACAAGATTAAACCGAGTCCCTGCAAGTTGGCATAGAATGTCTATCATTTaGTCGTTAAGGGAAAGGTCC +
Preference number: 4 (lower is better)
Translates to: GHLEIHETRLNRVPASWHRMSII*SLRERS
Trigger: GGACCTTTCCCTTAACGACCAAATGATAGACATTCT...ATGCCAACTTGCAGGGACTCGGTTTAATCTTGTCTCATGAATTTCCAGATGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp GGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGACCAGATATTCCCTGTaGCCAAATCTTTTACTTAGA +
Preference number: 4 (lower is better)
Translates to: GGGAERRSVYVLVIWKRVTRYSL*PNLLLR
Trigger: TCTAAGTAAAAGATTTGGCCACAGGGAATATCTGGT...CACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp GTAACAAATACAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATGATGACTGGAGGTTCTaGACCAGATATTCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: VTNTKHKSRESGCHHTDHDDWRF*TRYSLW
Trigger: CCACAGGGAATATCTGGTCCAGAACCTCCAGTCATC...ATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTGTATTTGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp AAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATTATGTCCTTGTGATATaGAAGAGAGTGGGCCATCTG +
Preference number: 4 (lower is better)
Translates to: KKECLCPCDMEESGPSGNYVLVI*KRVGHL
Trigger: CAGATGGCCCACTCTCTTCCATATCACAAGGACATA...ATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp GTAACAAATACAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATACTGCAGTCTTAAAGTaGCAGCATTCCACTTTGGGC +
Preference number: 4 (lower is better)
Translates to: VTNTKHKSRESGCHHTDHTAVLK*QHSTLG
Trigger: GCCCAAAGTGGAATGCTGTCACTTTAAGACTGCAGT...ATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTGTATTTGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp AAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATCGACCCAGACACCAGTaGACATTTCTGAAAAATTAC +
Preference number: 4 (lower is better)
Translates to: KKECLCPCDMEESGPSGNRPRHQ*TFLKNY
Trigger: GTAATTTTTCAGAAATGTGCACTGGTGTCTGGGTCG...ATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp GTTGTGCATTATAAACACACAAACACCGGCGGGCAGGAGAAAATCATCCCTTCTTCCAGCAATAGAAACTaGTTTTTGAAAACAGCACTC +
Preference number: 4 (lower is better)
Translates to: VVHYKHTNTGGQEKIIPSSSNRN*FLKTAL
Trigger: GAGTGCTGTTTTCAAAAAGCAGTTTCTATTGCTGGA...AGAAGGGATGATTTTCTCCTGCCCGCCGGTGTTTGTGTGTTTATAATGCACAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp TATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATTCATGAGACAAGAAAGTCTTCTTCTTGTTaGAAAGCGAGAGACTTCCTC +
Preference number: 4 (lower is better)
Translates to: YVLVIWKRVGHLEIHETRKSSSC*KARDFL
Trigger: GAGGAAGTCTCTCGCTTTGCAACAAGAAGAAGACTT...TCTTGTCTCATGAATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp ATATGGAAGAGAGTGGGCCATCTGGAAATTCATGAGACAAGATTAAACCGAGTCAAGTCTTCTTCTTGTTaGAAAGCGAGAGACTTCCTC +
Preference number: 4 (lower is better)
Translates to: IWKRVGHLEIHETRLNRVKSSSC*KARDFL
Trigger: GAGGAAGTCTCTCGCTTTGCAACAAGAAGAAGACTT...GACTCGGTTTAATCTTGTCTCATGAATTTCCAGATGGCCCACTCTCTTCCATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp CAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGAATTTTGTCTTCGATaGACTTCTTCAGAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: QNIRVENLAVTTQTIASAEFCLR*TSSEAL
Trigger: GAGAGCTTCTGAAGAAGTGCATCGAAGACAAAATTC...TGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp TCCAACGATTGCACTGCTCAGTCCGAGGTAACTCATCTATGTTTGGGACAAACTTACCTCTTACTAGCCTaGAAAAAGTCCATTAACTCT +
Preference number: 4 (lower is better)
Translates to: SNDCTAQSEVTHLCLGQTYLLLA*KKSINS
Trigger: AGAGTTAATGGACTTTTTCCAGGCTAGTAAGAGGTA...AGTTTGTCCCAAACATAGATGAGTTACCTCGGACTGAGCAGTGCAATCGTTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CCA 90 bp GTTGTGCATTATAAACACACAAACACCGGCGGGCAGGAGAAAATCATCCCTTCTACCAGATATTCCCTGTaGCCAAATCTTTTACTTAGA +
Preference number: 4 (lower is better)
Translates to: VVHYKHTNTGGQEKIIPSTRYSL*PNLLLR
Trigger: TCTAAGTAAAAGATTTGGCCACAGGGAATATCTGGT...AGAAGGGATGATTTTCTCCTGCCCGCCGGTGTTTGTGTGTTTATAATGCACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp ATATGGAAGAGAGTGGGCCATCTGGAAATTCATGAGACAAGATTAAACCGAGTCTTTTCAGAAGTCCCTTaGACTTCTCTTGAAATGTCC +
Preference number: 4 (lower is better)
Translates to: IWKRVGHLEIHETRLNRVFSEVP*TSLEMS
Trigger: GGACATTTCAAGAGAAGTTCAAGGGACTTCTGAAAA...GACTCGGTTTAATCTTGTCTCATGAATTTCCAGATGGCCCACTCTCTTCCATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp CAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAAATCTTTTACTTAGATaGTACCTCTTACTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: QNIRVENLAVTTQTIASANLLLR*YLLLAW
Trigger: CCAGGCTAGTAAGAGGTATCATCTAAGTAAAAGATT...TGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR TCA 90 bp TTTTCCTGCTTTAAGTCATTGTCCAACTTCTGCTTGATTGAAAAGACTTCTGTCGAAAAGACTTCTGTCTaGGCCCGCTCCAATAGCATT +
Preference number: 4 (lower is better)
Translates to: FSCFKSLSNFCLIEKTSVEKTSV*ARSNSI
Trigger: AATGCTATTGGAGCGGGCTCAGACAGAAGTCTTTTC...GACAGAAGTCTTTTCAATCAAGCAGAAGTTGGACAATGACTTAAAGCAGGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR GCA 90 bp TATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATTCATGAGACAAGATTTCATTCCAAGTGGTaGTTCCACTGCAGTCTTAAA +
Preference number: 4 (lower is better)
Translates to: YVLVIWKRVGHLEIHETRFHSKW*FHCSLK
Trigger: TTTAAGACTGCAGTGGAAGCACCACTTGGAATGAAA...TCTTGTCTCATGAATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp TATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATTCATGAGACAAGAAAGGCATCTCCCACTTaGAGAAACTTCTTGCTAAAA +
Preference number: 4 (lower is better)
Translates to: YVLVIWKRVGHLEIHETRKASPT*RNFLLK
Trigger: TTTTAGCAAGAAGTTTCTGCAAGTGGGAGATGCCTT...TCTTGTCTCATGAATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp CAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCATCCAGCAATAGAAACTaGTTTTTGAAAACAGCACTC +
Preference number: 4 (lower is better)
Translates to: QNIRVENLAVTTQTIASASSNRN*FLKTAL
Trigger: GAGTGCTGTTTTCAAAAAGCAGTTTCTATTGCTGGA...TGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp ATATGGAAGAGAGTGGGCCATCTGGAAATTCATGAGACAAGATTAAACCGAGTCGAATTTTGTCTTCGATaGACTTCTTCAGAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: IWKRVGHLEIHETRLNRVEFCLR*TSSEAL
Trigger: GAGAGCTTCTGAAGAAGTGCATCGAAGACAAAATTC...GACTCGGTTTAATCTTGTCTCATGAATTTCCAGATGGCCCACTCTCTTCCATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp AAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATCATTTTAGCTGCCTCTaGTTTCAATTCCCCTTTGAA +
Preference number: 4 (lower is better)
Translates to: KKECLCPCDMEESGPSGNHFSCL*FQFPFE
Trigger: TTCAAAGGGGAATTGAAACCAGAGGCAGCTAAAATG...ATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp CAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCATACCTCTTACTAGCCTaGAAAAAGTCCATTAACTCT +
Preference number: 4 (lower is better)
Translates to: QNIRVENLAVTTQTIASAYLLLA*KKSINS
Trigger: AGAGTTAATGGACTTTTTCCAGGCTAGTAAGAGGTA...TGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp TATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATTCATGAGACAAGATGTTTAATAGATCAATaGTTTCTGCCCCTACAATGG +
Preference number: 4 (lower is better)
Translates to: YVLVIWKRVGHLEIHETRCLIDQ*FLPLQW
Trigger: CCATTGTAGGGGCAGAAACCATTGATCTATTAAACA...TCTTGTCTCATGAATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp GTAACAAATACAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATTCTTTTCTAATCCTCTaGTTATCAGATCTCCTCGCA +
Preference number: 4 (lower is better)
Translates to: VTNTKHKSRESGCHHTDHSFLIL*LSDLLA
Trigger: TGCGAGGAGATCTGATAAGCAGAGGATTAGAAAAGA...ATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTGTATTTGTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CCA 90 bp GTAACAAATACAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATAGAATGTCTATCATTTaGTCGTTAAGGGAAAGGTCC +
Preference number: 4 (lower is better)
Translates to: VTNTKHKSRESGCHHTDHRMSII*SLRERS
Trigger: GGACCTTTCCCTTAACGACCAAATGATAGACATTCT...ATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTGTATTTGTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR GCA 90 bp TTTTCCTGCTTTAAGTCATTGTCCAACTTCTGCTTGATTGAAAAGACTTCTGTCATGTCTTCTTTAATATaGTCTGCTTTCTCTTGCGGG +
Preference number: 4 (lower is better)
Translates to: FSCFKSLSNFCLIEKTSVMSSLI*SAFSCG
Trigger: CCCGCAAGAGAAAGCAGAGCATATTAAAGAAGACAT...GACAGAAGTCTTTTCAATCAAGCAGAAGTTGGACAATGACTTAAAGCAGGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CCA 90 bp GTAACAAATACAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATTACCTCTTACTAGCCTaGAAAAAGTCCATTAACTCT +
Preference number: 4 (lower is better)
Translates to: VTNTKHKSRESGCHHTDHYLLLA*KKSINS
Trigger: AGAGTTAATGGACTTTTTCCAGGCTAGTAAGAGGTA...ATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTGTATTTGTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp CGGCCTCAGGAGCGTCATCCTTCAGTCTCTGCCTCACGCTCTGGACACCCTCCTACTCGGGCCCGGATCTaGGGGAGGGCCAAGCTCCTG +
Preference number: 5 (lower is better)
Translates to: RPQERHPSVSASRSGHPPTRARI*GRAKLL
Trigger: CAGGAGCTTGGCCCTCCCCAAGATCCGGGCCCGAGT...AGGAGGGTGTCCAGAGCGTGAGGCAGAGACTGAAGGATGACGCTCCTGAGGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CAA 90 bp GCTGTGAGGCTGTGGGCAGTACCACACTCAGGAGCCGGCGAAGCGTGGCCCCGGCCACGCAGTCTGAAATaGCTGCAGCAGAACTCGGGC +
Preference number: 5 (lower is better)
Translates to: AVRLWAVPHSGAGEAWPRPRSLK*LQQNSG
Trigger: GCCCGAGTTCTGCTGCAGCAATTTCAGACTGCGTGG...CCGGGGCCACGCTTCGCCGGCTCCTGAGTGTGGTACTGCCCACAGCCTCACAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CAA 90 bp ACTGGCCGGCATCCTCAACCGTTCGGAAGGCCTCGCCGACGGACGCCTGCTCCCGCTCTTGCTCAGGGCTaGGTGCAGGACAGTAGAGAC +
Preference number: 5 (lower is better)
Translates to: TGRHPQPFGRPRRRTPAPALAQG*VQDSRD
Trigger: GTCTCTACTGTCCTGCACCAAGCCCTGAGCAAGAGC...GGGAGCAGGCGTCCGTCGGCGAGGCCTTCCGAACGGTTGAGGATGCCGGCCAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS TCA 90 bp GGTGGAGCCTTTTGTGTGCTTCCTCATCCCTGCCTAGGTCCTGGGTaGCAGCTGACACCTGTTGACGGGGGAGGGCTCCACTCCCGCCAG +
Preference number: 5 (lower is better)
Translates to: GGAFCVLPHPCLGPG*QLTPVDGGGLHSRQ
Trigger: CTGGCGGGAGTGGAGCCCTCCCCCGTCAACAGGTGTCAGCTGTCACCCAGGACCTAGGCAGGGATGAGGAAGCACACAAAAGGCTCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000475313.5
CDS-3UTR CAA 90 bp CCGAGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCACAGGGCACCCCACGCTaGAGCAGCTCCTGGGTCATG +
Preference number: 5 (lower is better)
Translates to: PSPCKLACATGSVPSACAQGTPR*SSSWVM
Trigger: CATGACCCAGGAGCTGCTCAAGCGTGGGGTGCCCTG...TGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp CCGGATCTTGGGGAGGGCCAAGCTCCTGTCCATCTGAGCAAAGCAGCCATGGACCAGGGCACCCCACGCTaGAGCAGCTCCTGGGTCATG +
Preference number: 5 (lower is better)
Translates to: PDLGEGQAPVHLSKAAMDQGTPR*SSSWVM
Trigger: CATGACCCAGGAGCTGCTCAAGCGTGGGGTGCCCTG...GTCCATGGCTGCTTTGCTCAGATGGACAGGAGCTTGGCCCTCCCCAAGATCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CAA 90 bp CGTCATGAGGGCCATGACATTGTGTCAGCGCAGTGTGCCCACAGCTGGGCTCATACTCGGGCCCGGATCTaGGGGAGGGCCAAGCTCCTG +
Preference number: 5 (lower is better)
Translates to: RHEGHDIVSAQCAHSWAHTRARI*GRAKLL
Trigger: CAGGAGCTTGGCCCTCCCCAAGATCCGGGCCCGAGT...ATGAGCCCAGCTGTGGGCACACTGCGCTGACACAATGTCATGGCCCTCATGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS TCA 90 bp GGAAGAGGGCAGCCCAGGTCAGCACAAGGGAGAGGAGGAAGGCAATaGAGAACCCTGCTGCGTGGAGGCCGTGGTGCGGCAGAACCGTTA +
Preference number: 5 (lower is better)
Translates to: GRGQPRSAQGRGGRQ*RTLLRGGRGAAEPL
Trigger: TAACGGTTCTGCCGCACCACGGCCTCCACGCAGCAGGGTTCTTCATTGCCTTCCTCCTCTCCCTTGTGCTGACCTGGGCTGCCCTCTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310917.6
ENST00000344408.10
ENST00000475313.5
ENST00000509670.1
CDS-3UTR CAA 90 bp CCGTGCTCCTCCATCAGGCTCCTCTTCTGGTGCAGGTACTGGCCGGCATCCTCAAAAACGGAGAAGCATTaGGAGCGCGGGGCCGGGAGT +
Preference number: 5 (lower is better)
Translates to: PCSSIRLLFWCRYWPASSKTEKH*ERGAGS
Trigger: ACTCCCGGCCCCGCGCTCCAAATGCTTCTCCGTTTT...TGAGGATGCCGGCCAGTACCTGCACCAGAAGAGGAGCCTGATGGAGGAGCACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CAA 90 bp ACTGGCCGGCATCCTCAACCGTTCGGAAGGCCTCGCCGACGGACGCCTGCTCCCCTTCTGCTTCCTCCATaGCCATCATCTCTCTCTGGT +
Preference number: 5 (lower is better)
Translates to: TGRHPQPFGRPRRRTPAPLLLPP*PSSLSG
Trigger: ACCAGAGAGAGATGATGGCAATGGAGGAAGCAGAAG...GGGAGCAGGCGTCCGTCGGCGAGGCCTTCCGAACGGTTGAGGATGCCGGCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CAA 90 bp CGGCCTCAGGAGCGTCATCCTTCAGTCTCTGCCTCACGCTCTGGACACCCTCCTCCTGGCTGCACAGGGTaGCAAAGGTGTCTGCCTCCA +
Preference number: 5 (lower is better)
Translates to: RPQERHPSVSASRSGHPPPGCTG*QRCLPP
Trigger: TGGAGGCAGACACCTTTGCAACCCTGTGCAGCCAGG...AGGAGGGTGTCCAGAGCGTGAGGCAGAGACTGAAGGATGACGCTCCTGAGGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CAA 90 bp CAGGGTGGCACCGTGCTCCTCCATCAGGCTCCTCTTCTGGTGCAGGTACTGGCCGGCAAGGGTTCCAGCTaGCTCTCATACTGCCAAACC +
Preference number: 5 (lower is better)
Translates to: QGGTVLLHQAPLLVQVLAGKGSS*LSYCQT
Trigger: GGTTTGGCAGTATGAGAGCAAGCTGGAACCCTTGCC...GGCCAGTACCTGCACCAGAAGAGGAGCCTGATGGAGGAGCACGGTGCCACCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CAA 90 bp TCAGCTGGGCTGCAGCGGTGCTCAGAAGGCCCTGCACACGGGTCTCTGATGACTAGGGTCCGCAGAAGGTaGCTGCACTCTACAGCAGAC +
Preference number: 5 (lower is better)
Translates to: SAGLQRCSEGPAHGSLMTRVRRR*LHSTAD
Trigger: GTCTGCTGTAGAGTGCAGCAACCTTCTGCGGACCCT...AGTCATCAGAGACCCGTGTGCAGGGCCTTCTGAGCACCGCTGCAGCCCAGCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CAA 90 bp CCAAGTCATCCTCGTCATGAGGGCCATGACATTGTGTCAGCGCAGTGTGCCCACAGTTGGGCAGGAAGCTaGAGGCTCTCCCCGTTCCCG +
Preference number: 5 (lower is better)
Translates to: PSHPRHEGHDIVSAQCAHSWAGS*RLSPFP
Trigger: CGGGAACGGGGAGAGCCTCAAGCTTCCTGCCCAACT...GTGGGCACACTGCGCTGACACAATGTCATGGCCCTCATGACGAGGATGACTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CAA 90 bp AGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTACTCGGGCCCGGATCTaGGGGAGGGCCAAGCTCCTG +
Preference number: 5 (lower is better)
Translates to: RESGCHHTDHSFCSRGWGTRARI*GRAKLL
Trigger: CAGGAGCTTGGCCCTCCCCAAGATCCGGGCCCGAGT...ACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp CCGTGCTCCTCCATCAGGCTCCTCTTCTGGTGCAGGTACTGGCCGGCATCCTCATGTGTGCAGGCCGACTaGGTCAGCATCTCAGATGCA +
Preference number: 5 (lower is better)
Translates to: PCSSIRLLFWCRYWPASSCVQAD*VSISDA
Trigger: TGCATCTGAGATGCTGACCAAGTCGGCCTGCACACA...TGAGGATGCCGGCCAGTACCTGCACCAGAAGAGGAGCCTGATGGAGGAGCACGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CAA 90 bp CTCCTCTTCTGGTGCAGGTACTGGCCGGCATCCTCAACCGTTCGGAAGGCCTCGAGTAATGTCTGGCTCTaGCTCAGGGCTTGGTGCAGG +
Preference number: 5 (lower is better)
Translates to: LLFWCRYWPASSTVRKASSNVWL*LRAWCR
Trigger: CCTGCACCAAGCCCTGAGCAAGAGCCAGACATTACT...CGAGGCCTTCCGAACGGTTGAGGATGCCGGCCAGTACCTGCACCAGAAGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS GCA 90 bp CCAGGTCAGCACAAGGGAGAGGAGGAAGGCAATGAAGAACCCTGCTaGGTGGAGGCCGTGGTGCGGCAGAACCGTTACGTTTTCTTCTGC +
Preference number: 5 (lower is better)
Translates to: PGQHKGEEEGNEEPC*VEAVVRQNRYVFFC
Trigger: GCAGAAGAAAACGTAACGGTTCTGCCGCACCACGGCCTCCACGCAGCAGGGTTCTTCATTGCCTTCCTCCTCTCCCTTGTGCTGACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310917.6
ENST00000344408.10
ENST00000475313.5
ENST00000509670.1
CDS GCA 90 bp AGCCCAGGTCAGCACAAGGGAGAGGAGGAAGGCAATGAAGAACCCTaGTGCGTGGAGGCCGTGGTGCGGCAGAACCGTTACGTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: SPGQHKGEEEGNEEP*CVEAVVRQNRYVFF
Trigger: GAAGAAAACGTAACGGTTCTGCCGCACCACGGCCTCCACGCAGCAGGGTTCTTCATTGCCTTCCTCCTCTCCCTTGTGCTGACCTGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310917.6
ENST00000344408.10
ENST00000475313.5
ENST00000509670.1
CDS-3UTR CAA 90 bp ATGAGGGCCATGACATTGTGTCAGCGCAGTGTGCCCACAGCTGGGCTCATAGGAAAAACGGAGAAGCATTaGGAGCGCGGGGCCGGGAGT +
Preference number: 5 (lower is better)
Translates to: MRAMTLCQRSVPTAGLIGKTEKH*ERGAGS
Trigger: ACTCCCGGCCCCGCGCTCCAAATGCTTCTCCGTTTT...TCCTATGAGCCCAGCTGTGGGCACACTGCGCTGACACAATGTCATGGCCCTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CAA 90 bp CCGAGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCAGCTCTGAAAGGTGAGTaGGGCAGGAAGCTTGAGGCT +
Preference number: 5 (lower is better)
Translates to: PSPCKLACATGSVPSACAALKGE*GRKLEA
Trigger: AGCCTCAAGCTTCCTGCCCAACTCACCTTTCAGAGC...TGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp CGTCATGAGGGCCATGACATTGTGTCAGCGCAGTGTGCCCACAGCTGGGCTCATCCACGCAGTCTGAAATaGCTGCAGCAGAACTCGGGC +
Preference number: 5 (lower is better)
Translates to: RHEGHDIVSAQCAHSWAHPRSLK*LQQNSG
Trigger: GCCCGAGTTCTGCTGCAGCAATTTCAGACTGCGTGG...ATGAGCCCAGCTGTGGGCACACTGCGCTGACACAATGTCATGGCCCTCATGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CAA 90 bp GAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTGTGCCGAGTCCCTGCAAGTaGGCATGCGCTACGGGGTCT +
Preference number: 5 (lower is better)
Translates to: ESGCHHTDHSFCSRGWGVPSPCK*ACATGS
Trigger: AGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGG...CACACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp CGTCATGAGGGCCATGACATTGTGTCAGCGCAGTGTGCCCACAGCTGGGCTCATCTCCCAGGCCCTTCCTaGGTGTTCCAGGGCCATATT +
Preference number: 5 (lower is better)
Translates to: RHEGHDIVSAQCAHSWAHLPGPS*VFQGHI
Trigger: AATATGGCCCTGGAACACCAAGGAAGGGCCTGGGAG...ATGAGCCCAGCTGTGGGCACACTGCGCTGACACAATGTCATGGCCCTCATGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CAA 90 bp CGTCATGAGGGCCATGACATTGTGTCAGCGCAGTGTGCCCACAGCTGGGCTCATATGAGGGCCATGACATaGTGTCAGCGCAGTGTGCCC +
Preference number: 5 (lower is better)
Translates to: RHEGHDIVSAQCAHSWAHMRAMT*CQRSVP
Trigger: GGGCACACTGCGCTGACACAATGTCATGGCCCTCAT...ATGAGCCCAGCTGTGGGCACACTGCGCTGACACAATGTCATGGCCCTCATGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CAA 90 bp AAACCGAGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGGACAGGGATTTGCTTaGCCAAGGGACGCAGGAGGA +
Preference number: 5 (lower is better)
Translates to: KPSPCKLACATGSVPSACGQGFA*PRDAGG
Trigger: TCCTCCTGCGTCCCTTGGCAAAGCAAATCCCTGTCC...ACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310917.6
CDS-3UTR CAA 90 bp AGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCAATTGACCCTCACTTCCGGTaGCGTTCAGTGCAGACCAGC +
Preference number: 5 (lower is better)
Translates to: SPCKLACATGSVPSACAIDPHFR*RSVQTS
Trigger: GCTGGTCTGCACTGAACGCAACCGGAAGTGAGGGTC...AATTGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310917.6
CDS-3UTR CAA 90 bp CCGTGCTCCTCCATCAGGCTCCTCTTCTGGTGCAGGTACTGGCCGGCATCCTCAGCTGACGAGGTTGTCTaGGTGTTGTTAACAAGCAGC +
Preference number: 5 (lower is better)
Translates to: PCSSIRLLFWCRYWPASSADEVV*VLLTSS
Trigger: GCTGCTTGTTAACAACACCAAGACAACCTCGTCAGC...TGAGGATGCCGGCCAGTACCTGCACCAGAAGAGGAGCCTGATGGAGGAGCACGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CAA 90 bp ATCCAGGTACCCTGCTCTCTCGTGCTTCTGAATGAGGTGAGTCAGCTGGGCTGCAGCAGCTCCGAGAGGTaGGCTGACGAGGTTGTCTTG +
Preference number: 5 (lower is better)
Translates to: IQVPCSLVLLNEVSQLGCSSSER*ADEVVL
Trigger: CAAGACAACCTCGTCAGCCAACCTCTCGGAGCTGCT...GCAGCCCAGCTGACTCACCTCATTCAGAAGCACGAGAGAGCAGGGTACCTGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CAA 90 bp CTTTCCCTTGGGCTAGTCCATGCCCAAGGCCCTCATGGCCTTTTTGGCATTCAAAGTTGGGCAGGAAGCTaGAGGCTCTCCCCGTTCCCG +
Preference number: 5 (lower is better)
Translates to: LSLGLVHAQGPHGLFGIQSWAGS*RLSPFP
Trigger: CGGGAACGGGGAGAGCCTCAAGCTTCCTGCCCAACT...TTGAATGCCAAAAAGGCCATGAGGGCCTTGGGCATGGACTAGCCCAAGGGAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CAA 90 bp CATGAGGGCCATGACATTGTGTCAGCGCAGTGTGCCCACAGCTGGGCTCATAGGGCTCTGAAAGGTGAGTaGGGCAGGAAGCTTGAGGCT +
Preference number: 5 (lower is better)
Translates to: HEGHDIVSAQCAHSWAHRALKGE*GRKLEA
Trigger: AGCCTCAAGCTTCCTGCCCAACTCACCTTTCAGAGC...CCTATGAGCCCAGCTGTGGGCACACTGCGCTGACACAATGTCATGGCCCTCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CAA 90 bp TCAGGATTGGCTCCTCCAAGTCATCCTCGTCATGAGGGCCATGACATTGTGTCACAGGGCACCCCACGCTaGAGCAGCTCCTGGGTCATG +
Preference number: 5 (lower is better)
Translates to: SGLAPPSHPRHEGHDIVSQGTPR*SSSWVM
Trigger: CATGACCCAGGAGCTGCTCAAGCGTGGGGTGCCCTG...TGACACAATGTCATGGCCCTCATGACGAGGATGACTTGGAGGAGCCAATCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CAA 90 bp CGGCCTCAGGAGCGTCATCCTTCAGTCTCTGCCTCACGCTCTGGACACCCTCCTCCCTTGCTTTTACTCTaGGACCGTGACTTTCTCACC +
Preference number: 5 (lower is better)
Translates to: RPQERHPSVSASRSGHPPPLLLL*DRDFLT
Trigger: GGTGAGAAAGTCACGGTCCAAGAGTAAAAGCAAGGG...AGGAGGGTGTCCAGAGCGTGAGGCAGAGACTGAAGGATGACGCTCCTGAGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CAA 90 bp TGCTGCAGCAGAACTCGGGCCCGGATCTTGGGGAGGGCCAAGCTCCTGTCCATCCACGACACTGTTCTGTaGTTCCTCTCTCAAACACTG +
Preference number: 5 (lower is better)
Translates to: CCSRTRARILGRAKLLSIHDTVL*FLSQTL
Trigger: CAGTGTTTGAGAGAGGAACAACAGAACAGTGTCGTG...GATGGACAGGAGCTTGGCCCTCCCCAAGATCCGGGCCCGAGTTCTGCTGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CAA 90 bp AGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCAATTCCTGGCTGCACAGGGTaGCAAAGGTGTCTGCCTCCA +
Preference number: 5 (lower is better)
Translates to: SPCKLACATGSVPSACAIPGCTG*QRCLPP
Trigger: TGGAGGCAGACACCTTTGCAACCCTGTGCAGCCAGG...AATTGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp GCTCCTCCAAGTCATCCTCGTCATGAGGGCCATGACATTGTGTCAGCGCAGTGTCCTGGCTGCACAGGGTaGCAAAGGTGTCTGCCTCCA +
Preference number: 5 (lower is better)
Translates to: APPSHPRHEGHDIVSAQCPGCTG*QRCLPP
Trigger: TGGAGGCAGACACCTTTGCAACCCTGTGCAGCCAGG...ACACTGCGCTGACACAATGTCATGGCCCTCATGACGAGGATGACTTGGAGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CAA 90 bp CTCTTCAGATGCTCCCGCAGGTCTTTCCCTTGGGCTAGTCCATGCCCAAGGCCCAGATCTCCTCGCAGTTaGCCATCTAAGGCTTGCCAC +
Preference number: 5 (lower is better)
Translates to: LFRCSRRSFPWASPCPRPRSPRS*PSKACH
Trigger: GTGGCAAGCCTTAGATGGCAAACTGCGAGGAGATCT...GGGCCTTGGGCATGGACTAGCCCAAGGGAAAGACCTGCGGGAGCATCTGAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS TCA 90 bp CCTGGAATCCTTCCGAGGTCCTGTTTCCCACAGAGTCCCAAATGGTaGGACCAGCAATGCTGTCCAGCAAGAGCAGCTCCGAGAGGTTGG +
Preference number: 5 (lower is better)
Translates to: PGILPRSCFPQSPKW*DQQCCPARAAPRGW
Trigger: CCAACCTCTCGGAGCTGCTCTTGCTGGACAGCATTGCTGGTCTCACCATTTGGGACTCTGTGGGAAACAGGACCTCGGAAGGATTCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310917.6
ENST00000344408.10
ENST00000475313.5
ENST00000509670.1
CDS CCA 90 bp TGTTGCAAAGCGAGAGACTTCCTCAAGTGCTCCTGTTCCAGGCCATaGAGGGTCCGCAGAAGGTTGCTGCACTCTACAGCAGACAGCACG +
Preference number: 5 (lower is better)
Translates to: CCKARDFLKCSCSRP*RVRRRLLHSTADST
Trigger: CGTGCTGTCTGCTGTAGAGTGCAGCAACCTTCTGCGGACCCTCCATGGCCTGGAACAGGAGCACTTGAGGAAGTCTCTCGCTTTGCAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CAA 90 bp GGTCAGTTGTCAGGATTGGCTCCTCCAAGTCATCCTCGTCATGAGGGCCATGACGGACAGGGATTTGCTTaGCCAAGGGACGCAGGAGGA +
Preference number: 5 (lower is better)
Translates to: GQLSGLAPPSHPRHEGHDGQGFA*PRDAGG
Trigger: TCCTCCTGCGTCCCTTGGCAAAGCAAATCCCTGTCC...GTCATGGCCCTCATGACGAGGATGACTTGGAGGAGCCAATCCTGACAACTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CAA 90 bp GAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTGTGAGCAGCTCCGAGAGGTaGGCTGACGAGGTTGTCTTG +
Preference number: 5 (lower is better)
Translates to: ESGCHHTDHSFCSRGWGVSSSER*ADEVVL
Trigger: CAAGACAACCTCGTCAGCCAACCTCTCGGAGCTGCT...CACACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp AGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCAATTAGGGTCCGCAGAAGGTaGCTGCACTCTACAGCAGAC +
Preference number: 5 (lower is better)
Translates to: SPCKLACATGSVPSACAIRVRRR*LHSTAD
Trigger: GTCTGCTGTAGAGTGCAGCAACCTTCTGCGGACCCT...AATTGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp AGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCAATTCCACGCAGTCTGAAATaGCTGCAGCAGAACTCGGGC +
Preference number: 5 (lower is better)
Translates to: SPCKLACATGSVPSACAIPRSLK*LQQNSG
Trigger: GCCCGAGTTCTGCTGCAGCAATTTCAGACTGCGTGG...AATTGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp CGGCCTCAGGAGCGTCATCCTTCAGTCTCTGCCTCACGCTCTGGACACCCTCCTTTCAGAAGCTCTCCCTaGCTTTTACTCTTGGACCGT +
Preference number: 5 (lower is better)
Translates to: RPQERHPSVSASRSGHPPFRSSP*LLLLDR
Trigger: ACGGTCCAAGAGTAAAAGCAAGGGAGAGCTTCTGAA...AGGAGGGTGTCCAGAGCGTGAGGCAGAGACTGAAGGATGACGCTCCTGAGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CAA 90 bp AGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTCCTGGCTGCACAGGGTaGCAAAGGTGTCTGCCTCCA +
Preference number: 5 (lower is better)
Translates to: RESGCHHTDHSFCSRGWGPGCTG*QRCLPP
Trigger: TGGAGGCAGACACCTTTGCAACCCTGTGCAGCCAGG...ACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp GTCAGCTGGGCTGCAGCGGTGCTCAGAAGGCCCTGCACACGGGTCTCTGATGACGCCCTCATGGCCTTTTaGGCATTCAAAAAGTTCTTC +
Preference number: 5 (lower is better)
Translates to: VSWAAAVLRRPCTRVSDDALMAF*AFKKFF
Trigger: GAAGAACTTTTTGAATGCCAAAAAGGCCATGAGGGC...GTCATCAGAGACCCGTGTGCAGGGCCTTCTGAGCACCGCTGCAGCCCAGCTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS TCA 90 bp GAGACCAGCAATGCTGTCCAGCAAGAGCAGCTCCGAGAGGTTGGCTaGCGAGGTTGTCTTGGTGTTGTTAACAAGCAGCCATATGCGGGC +
Preference number: 5 (lower is better)
Translates to: ETSNAVQQEQLREVG*RGCLGVVNKQPYAG
Trigger: GCCCGCATATGGCTGCTTGTTAACAACACCAAGACAACCTCGTCAGCCAACCTCTCGGAGCTGCTCTTGCTGGACAGCATTGCTGGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310917.6
ENST00000344408.10
ENST00000475313.5
ENST00000509670.1
CDS CCA 90 bp TGTTGCAAAGCGAGAGACTTCCTCAAGTGCTCCTGTTCCAGGCCATaGAGGGTCCGCAGAAGGTTGCTGCACTCTACAGCAGACCTCTCA +
Preference number: 5 (lower is better)
Translates to: CCKARDFLKCSCSRP*RVRRRLLHSTADLS
Trigger: TGAGAGGTCTGCTGTAGAGTGCAGCAACCTTCTGCGGACCCTCCATGGCCTGGAACAGGAGCACTTGAGGAAGTCTCTCGCTTTGCAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310917.6
ENST00000344408.10
ENST00000475313.5
CDS-3UTR CAA 90 bp CTTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTGCTCGAGGGGACAGGGATTaGCTTTGCCAAGGGACGCAG +
Preference number: 5 (lower is better)
Translates to: LGVPGPYYANRGSNDCTARGDRD*LCQGTQ
Trigger: CTGCGTCCCTTGGCAAAGCAAATCCCTGTCCCCTCG...AGCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CAA 90 bp TGCTCCTCTGTCACGGCCTCAGGAGCGTCATCCTTCAGTCTCTGCCTCACGCTCTCCCTTGAACTTCTCTaGAAATGTCCCCATACAGGC +
Preference number: 5 (lower is better)
Translates to: CSSVTASGASSFSLCLTLSLELL*KCPHTG
Trigger: GCCTGTATGGGGACATTTCAAGAGAAGTTCAAGGGA...GAGCGTGAGGCAGAGACTGAAGGATGACGCTCCTGAGGCCGTGACAGAGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CAA 90 bp GGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGCAGGGCACCCCACGCTaGAGCAGCTCCTGGGTCATG +
Preference number: 5 (lower is better)
Translates to: GGGAERRSVYVLVIWKRVQGTPR*SSSWVM
Trigger: CATGACCCAGGAGCTGCTCAAGCGTGGGGTGCCCTG...CACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp CCGAGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCATTCAGAAGCTCTCCCTaGCTTTTACTCTTGGACCGT +
Preference number: 5 (lower is better)
Translates to: PSPCKLACATGSVPSACAFRSSP*LLLLDR
Trigger: ACGGTCCAAGAGTAAAAGCAAGGGAGAGCTTCTGAA...TGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp GAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTGTGTGTGTGCAGGCCGACTaGGTCAGCATCTCAGATGCA +
Preference number: 5 (lower is better)
Translates to: ESGCHHTDHSFCSRGWGVCVQAD*VSISDA
Trigger: TGCATCTGAGATGCTGACCAAGTCGGCCTGCACACA...CACACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp CCGAGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCACACGACACTGTTCTGTaGTTCCTCTCTCAAACACTG +
Preference number: 5 (lower is better)
Translates to: PSPCKLACATGSVPSACAHDTVL*FLSQTL
Trigger: CAGTGTTTGAGAGAGGAACAACAGAACAGTGTCGTG...TGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp AAACCGAGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCTGACGAGGTTGTCTaGGTGTTGTTAACAAGCAGC +
Preference number: 5 (lower is better)
Translates to: KPSPCKLACATGSVPSACADEVV*VLLTSS
Trigger: GCTGCTTGTTAACAACACCAAGACAACCTCGTCAGC...ACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp TCAGGATTGGCTCCTCCAAGTCATCCTCGTCATGAGGGCCATGACATTGTGTCAAGCAGCTCCGAGAGGTaGGCTGACGAGGTTGTCTTG +
Preference number: 5 (lower is better)
Translates to: SGLAPPSHPRHEGHDIVSSSSER*ADEVVL
Trigger: CAAGACAACCTCGTCAGCCAACCTCTCGGAGCTGCT...TGACACAATGTCATGGCCCTCATGACGAGGATGACTTGGAGGAGCCAATCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CAA 90 bp GGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGAGTTGGGCAGGAAGCTaGAGGCTCTCCCCGTTCCCG +
Preference number: 5 (lower is better)
Translates to: GGGAERRSVYVLVIWKRVSWAGS*RLSPFP
Trigger: CGGGAACGGGGAGAGCCTCAAGCTTCCTGCCCAACT...CACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp ATCCAGGTACCCTGCTCTCTCGTGCTTCTGAATGAGGTGAGTCAGCTGGGCTGCCTGCCCGATTCAGGGTaGCAATCTCCAACTCTTCTA +
Preference number: 5 (lower is better)
Translates to: IQVPCSLVLLNEVSQLGCLPDSG*QSPTLL
Trigger: TAGAAGAGTTGGAGATTGCAACCCTGAATCGGGCAG...GCAGCCCAGCTGACTCACCTCATTCAGAAGCACGAGAGAGCAGGGTACCTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CAA 90 bp CCGGATCTTGGGGAGGGCCAAGCTCCTGTCCATCTGAGCAAAGCAGCCATGGACGGCAAAGTCTTCTTCTaGTTGCAAAGCGAGAGACTT +
Preference number: 5 (lower is better)
Translates to: PDLGEGQAPVHLSKAAMDGKVFF*LQSERL
Trigger: AAGTCTCTCGCTTTGCAACAAGAAGAAGACTTTGCC...GTCCATGGCTGCTTTGCTCAGATGGACAGGAGCTTGGCCCTCCCCAAGATCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS GCA 90 bp TTGGCAAAGTCTTCTTCTTGTTGCAAAGCGAGAGACTTCCTCAAGTaGTCCTGTTCCAGGCCATGGAGGGTCCGCAGAAGGTTGCTGCAC +
Preference number: 5 (lower is better)
Translates to: LAKSSSCCKARDFLK*SCSRPWRVRRRLLH
Trigger: GTGCAGCAACCTTCTGCGGACCCTCCATGGCCTGGAACAGGAGCACTTGAGGAAGTCTCTCGCTTTGCAACAAGAAGAAGACTTTGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310917.6
ENST00000344408.10
ENST00000475313.5
ENST00000509670.1
CDS-3UTR CAA 90 bp GAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTGTGGCTGACGAGGTTGTCTaGGTGTTGTTAACAAGCAGC +
Preference number: 5 (lower is better)
Translates to: ESGCHHTDHSFCSRGWGVADEVV*VLLTSS
Trigger: GCTGCTTGTTAACAACACCAAGACAACCTCGTCAGC...CACACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp CCGAGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCAACTTGCAGAAACTTCTaGCTAAAAGCCTGGAATCCT +
Preference number: 5 (lower is better)
Translates to: PSPCKLACATGSVPSACATCRNF*LKAWNP
Trigger: AGGATTCCAGGCTTTTAGCAAGAAGTTTCTGCAAGT...TGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp CCGAGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCAAAAGGCATCTCCCACTaGCAGAAACTTCTTGCTAAA +
Preference number: 5 (lower is better)
Translates to: PSPCKLACATGSVPSACAKGISH*QKLLAK
Trigger: TTTAGCAAGAAGTTTCTGCAAGTGGGAGATGCCTTT...TGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp TGCTTATCAGATCTCCTCGCAGTTTGCCATCTAAGGCTTGCCACCAGCTCTGGTGCTCTGAAAGGTGAGTaGGGCAGGAAGCTTGAGGCT +
Preference number: 5 (lower is better)
Translates to: CLSDLLAVCHLRLATSSGALKGE*GRKLEA
Trigger: AGCCTCAAGCTTCCTGCCCAACTCACCTTTCAGAGC...ACCAGAGCTGGTGGCAAGCCTTAGATGGCAAACTGCGAGGAGATCTGATAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CAA 90 bp GCAGCTCTGCCTGCTCCTCTGTCACGGCCTCAGGAGCGTCATCCTTCAGTCTCTCAGAATGTCTATCATTaGGTCGTTAAGGGAAAGGTC +
Preference number: 5 (lower is better)
Translates to: AALPAPLSRPQERHPSVSQNVYH*VVKGKV
Trigger: GACCTTTCCCTTAACGACCAAATGATAGACATTCTG...AGAGACTGAAGGATGACGCTCCTGAGGCCGTGACAGAGGAGCAGGCAGAGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CAA 90 bp GAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTGTGCTTCTGCTTCCTCCATaGCCATCATCTCTCTCTGGT +
Preference number: 5 (lower is better)
Translates to: ESGCHHTDHSFCSRGWGVLLLPP*PSSLSG
Trigger: ACCAGAGAGAGATGATGGCAATGGAGGAAGCAGAAG...CACACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp GGATTGGCTCCTCCAAGTCATCCTCGTCATGAGGGCCATGACATTGTGTCAGCGCTTCTGCTTCCTCCATaGCCATCATCTCTCTCTGGT +
Preference number: 5 (lower is better)
Translates to: GLAPPSHPRHEGHDIVSALLLPP*PSSLSG
Trigger: ACCAGAGAGAGATGATGGCAATGGAGGAAGCAGAAG...CGCTGACACAATGTCATGGCCCTCATGACGAGGATGACTTGGAGGAGCCAATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CAA 90 bp AAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATACTCGGGCCCGGATCTaGGGGAGGGCCAAGCTCCTG +
Preference number: 5 (lower is better)
Translates to: KKECLCPCDMEESGPSGNTRARI*GRAKLL
Trigger: CAGGAGCTTGGCCCTCCCCAAGATCCGGGCCCGAGT...ATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp TCAGGATTGGCTCCTCCAAGTCATCCTCGTCATGAGGGCCATGACATTGTGTCATGTGTGCAGGCCGACTaGGTCAGCATCTCAGATGCA +
Preference number: 5 (lower is better)
Translates to: SGLAPPSHPRHEGHDIVSCVQAD*VSISDA
Trigger: TGCATCTGAGATGCTGACCAAGTCGGCCTGCACACA...TGACACAATGTCATGGCCCTCATGACGAGGATGACTTGGAGGAGCCAATCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CAA 90 bp TCAGGATTGGCTCCTCCAAGTCATCCTCGTCATGAGGGCCATGACATTGTGTCAAGTAATGTCTGGCTCTaGCTCAGGGCTTGGTGCAGG +
Preference number: 5 (lower is better)
Translates to: SGLAPPSHPRHEGHDIVSSNVWL*LRAWCR
Trigger: CCTGCACCAAGCCCTGAGCAAGAGCCAGACATTACT...TGACACAATGTCATGGCCCTCATGACGAGGATGACTTGGAGGAGCCAATCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CAA 90 bp TTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTGCTCGACCTCTGCTTTCTCTaGCGGGCCCACAGCATCTTT +
Preference number: 5 (lower is better)
Translates to: LVFQGHITQTEAPTIALLDLCFL*RAHSIF
Trigger: AAAGATGCTGTGGGCCCGCAAGAGAAAGCAGAGGTC...GAGCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS GCA 90 bp GACATCCACTCAATTAACCCAATCTCTGGAGTCCCTACCAGGTACTaGCAGAAGCTCTCTTGGTTCCCTGACCTCTGCTTTCTCTTGCGG +
Preference number: 5 (lower is better)
Translates to: DIHSINPISGVPTRY*QKLSWFPDLCFLLR
Trigger: CCGCAAGAGAAAGCAGAGGTCAGGGAACCAAGAGAGCTTCTGGCAGTACCTGGTAGGGACTCCAGAGATTGGGTTAATTGAGTGGATGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CAA 90 bp GTCACCCGGGACGCCTTCTGGAACTGCAGAGCAACAAGCGACTGTGCAAAGCCTCCGATCGTACTCCTCTaGTATTTCATTTTCCAGCAA +
Preference number: 5 (lower is better)
Translates to: VTRDAFWNCRATSDCAKPPIVLL*YFIFQQ
Trigger: TTGCTGGAAAATGAAATACAAGAGGAGTACGATCGG...AGGCTTTGCACAGTCGCTTGTTGCTCTGCAGTTCCAGAAGGCGTCCCGGGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CAA 90 bp CTCGCCACGCAGTCTGAAATTGCTGCAGCAGAACTCGGGCCCGGATCTTGGGGATCCTGCTTTAAGTCATaGTCCAACTTCTGCTTGATT +
Preference number: 5 (lower is better)
Translates to: LATQSEIAAAELGPGSWGSCFKS*SNFCLI
Trigger: AATCAAGCAGAAGTTGGACAATGACTTAAAGCAGGA...TCCCCAAGATCCGGGCCCGAGTTCTGCTGCAGCAATTTCAGACTGCGTGGCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CAA 90 bp GGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGCCACGCAGTCTGAAATaGCTGCAGCAGAACTCGGGC +
Preference number: 5 (lower is better)
Translates to: GGGAERRSVYVLVIWKRVPRSLK*LQQNSG
Trigger: GCCCGAGTTCTGCTGCAGCAATTTCAGACTGCGTGG...CACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp AGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCAATTTTCAGAAGCTCTCCCTaGCTTTTACTCTTGGACCGT +
Preference number: 5 (lower is better)
Translates to: SPCKLACATGSVPSACAIFRSSP*LLLLDR
Trigger: ACGGTCCAAGAGTAAAAGCAAGGGAGAGCTTCTGAA...AATTGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp CTCCAACGATTGCACTGCTCAGTCCGAGGTAACTCATCTATGTTTGGGACAAACGCTCTTGCTCAGGGCTaGGTGCAGGACAGTAGAGAC +
Preference number: 5 (lower is better)
Translates to: LQRLHCSVRGNSSMFGTNALAQG*VQDSRD
Trigger: GTCTCTACTGTCCTGCACCAAGCCCTGAGCAAGAGC...GTTTGTCCCAAACATAGATGAGTTACCTCGGACTGAGCAGTGCAATCGTTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CAA 90 bp TTGTCAGGATTGGCTCCTCCAAGTCATCCTCGTCATGAGGGCCATGACATTGTGAGATCTCCTCGCAGTTaGCCATCTAAGGCTTGCCAC +
Preference number: 5 (lower is better)
Translates to: LSGLAPPSHPRHEGHDIVRSPRS*PSKACH
Trigger: GTGGCAAGCCTTAGATGGCAAACTGCGAGGAGATCT...CACAATGTCATGGCCCTCATGACGAGGATGACTTGGAGGAGCCAATCCTGACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CAA 90 bp CTCCAACGATTGCACTGCTCAGTCCGAGGTAACTCATCTATGTTTGGGACAAACCAGAGGCTCCAACGATaGCACTGCTCAGTCCGAGGT +
Preference number: 5 (lower is better)
Translates to: LQRLHCSVRGNSSMFGTNQRLQR*HCSVRG
Trigger: ACCTCGGACTGAGCAGTGCAATCGTTGGAGCCTCTG...GTTTGTCCCAAACATAGATGAGTTACCTCGGACTGAGCAGTGCAATCGTTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CAA 90 bp CCTTCCTTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCAGGTCAGTTGTCAGGATaGGCTCCTCCAAGTCATCCT +
Preference number: 5 (lower is better)
Translates to: PSLVFQGHITQTEAPTIAGQLSG*APPSHP
Trigger: AGGATGACTTGGAGGAGCCAATCCTGACAACTGACC...TGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAAGGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS GCA 90 bp ACCTCTGCTTTCTCTTGCGGGCCCACAGCATCTTTTCTAATCCTCTaGTTATCAGATCTCCTCGCAGTTTGCCATCTAAGGCTTGCCACC +
Preference number: 5 (lower is better)
Translates to: TSAFSCGPTASFLIL*LSDLLAVCHLRLAT
Trigger: GGTGGCAAGCCTTAGATGGCAAACTGCGAGGAGATCTGATAAGCAGAGGATTAGAAAAGATGCTGTGGGCCCGCAAGAGAAAGCAGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CAA 90 bp GTTGTGCATTATAAACACACAAACACCGGCGGGCAGGAGAAAATCATCCCTTCTAGCAGCTCCGAGAGGTaGGCTGACGAGGTTGTCTTG +
Preference number: 5 (lower is better)
Translates to: VVHYKHTNTGGQEKIIPSSSSER*ADEVVL
Trigger: CAAGACAACCTCGTCAGCCAACCTCTCGGAGCTGCT...AGAAGGGATGATTTTCTCCTGCCCGCCGGTGTTTGTGTGTTTATAATGCACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp ATGAGGGCCATGACATTGTGTCAGCGCAGTGTGCCCACAGCTGGGCTCATAGGAAAAGGCATCTCCCACTaGCAGAAACTTCTTGCTAAA +
Preference number: 5 (lower is better)
Translates to: MRAMTLCQRSVPTAGLIGKGISH*QKLLAK
Trigger: TTTAGCAAGAAGTTTCTGCAAGTGGGAGATGCCTTT...TCCTATGAGCCCAGCTGTGGGCACACTGCGCTGACACAATGTCATGGCCCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CAA 90 bp TATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATTCATGAGACAAGAAGTTGGGCAGGAAGCTaGAGGCTCTCCCCGTTCCCG +
Preference number: 5 (lower is better)
Translates to: YVLVIWKRVGHLEIHETRSWAGS*RLSPFP
Trigger: CGGGAACGGGGAGAGCCTCAAGCTTCCTGCCCAACT...TCTTGTCTCATGAATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp GGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGGCTCTGAAAGGTGAGTaGGGCAGGAAGCTTGAGGCT +
Preference number: 5 (lower is better)
Translates to: GGGAERRSVYVLVIWKRVALKGE*GRKLEA
Trigger: AGCCTCAAGCTTCCTGCCCAACTCACCTTTCAGAGC...CACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp CTCCAACGATTGCACTGCTCAGTCCGAGGTAACTCATCTATGTTTGGGACAAACGGCAAGGGTTCCAGCTaGCTCTCATACTGCCAAACC +
Preference number: 5 (lower is better)
Translates to: LQRLHCSVRGNSSMFGTNGKGSS*LSYCQT
Trigger: GGTTTGGCAGTATGAGAGCAAGCTGGAACCCTTGCC...GTTTGTCCCAAACATAGATGAGTTACCTCGGACTGAGCAGTGCAATCGTTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CAA 90 bp TCCAACGATTGCACTGCTCAGTCCGAGGTAACTCATCTATGTTTGGGACAAACTAGGGTCCGCAGAAGGTaGCTGCACTCTACAGCAGAC +
Preference number: 5 (lower is better)
Translates to: SNDCTAQSEVTHLCLGQTRVRRR*LHSTAD
Trigger: GTCTGCTGTAGAGTGCAGCAACCTTCTGCGGACCCT...AGTTTGTCCCAAACATAGATGAGTTACCTCGGACTGAGCAGTGCAATCGTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CAA 90 bp GGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGTGTGTGCAGGCCGACTaGGTCAGCATCTCAGATGCA +
Preference number: 5 (lower is better)
Translates to: GGGAERRSVYVLVIWKRVCVQAD*VSISDA
Trigger: TGCATCTGAGATGCTGACCAAGTCGGCCTGCACACA...CACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp GGCCATCTGGAAATTCATGAGACAAGATTAAACCGAGTCCCTGCAAGTTGGCATGCTCTTGCTCAGGGCTaGGTGCAGGACAGTAGAGAC +
Preference number: 5 (lower is better)
Translates to: GHLEIHETRLNRVPASWHALAQG*VQDSRD
Trigger: GTCTCTACTGTCCTGCACCAAGCCCTGAGCAAGAGC...ATGCCAACTTGCAGGGACTCGGTTTAATCTTGTCTCATGAATTTCCAGATGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS TCA 90 bp TATCATTTGGTCGTTAAGGGAAAGGTCCTCATTCACGCCATCAGCTaGGGTGAACGGCAAGGGTTCCAGCTTGCTCTCATACTGCCAAAC +
Preference number: 5 (lower is better)
Translates to: YHLVVKGKVLIHAIS*GERQGFQLALILPN
Trigger: GTTTGGCAGTATGAGAGCAAGCTGGAACCCTTGCCGTTCACCTCAGCTGATGGCGTGAATGAGGACCTTTCCCTTAACGACCAAATGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310917.6
ENST00000344408.10
ENST00000475313.5
ENST00000509670.1
CDS GCA 90 bp GCACTCTACAGCAGACCTCTCACCAGCACGTTTCAGCAACTCTTCTaGTTCCTCCATTGCCATCATCTCTCTCTGGTACTGGTTTTCCAT +
Preference number: 5 (lower is better)
Translates to: ALYSRPLTSTFQQLF*FLHCHHLSLVLVFH
Trigger: ATGGAAAACCAGTACCAGAGAGAGATGATGGCAATGGAGGAAGCAGAAGAGTTGCTGAAACGTGCTGGTGAGAGGTCTGCTGTAGAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310917.6
ENST00000344408.10
ENST00000475313.5
CDS-3UTR CAA 90 bp TATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATTCATGAGACAAGAAAAACGGAGAAGCATTaGGAGCGCGGGGCCGGGAGT +
Preference number: 5 (lower is better)
Translates to: YVLVIWKRVGHLEIHETRKTEKH*ERGAGS
Trigger: ACTCCCGGCCCCGCGCTCCAAATGCTTCTCCGTTTT...TCTTGTCTCATGAATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310917.6
CDS-3UTR CAA 90 bp TCAGGATTGGCTCCTCCAAGTCATCCTCGTCATGAGGGCCATGACATTGTGTCATCCCTTGAACTTCTCTaGAAATGTCCCCATACAGGC +
Preference number: 5 (lower is better)
Translates to: SGLAPPSHPRHEGHDIVSSLELL*KCPHTG
Trigger: GCCTGTATGGGGACATTTCAAGAGAAGTTCAAGGGA...TGACACAATGTCATGGCCCTCATGACGAGGATGACTTGGAGGAGCCAATCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CAA 90 bp AGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCAATTACTTGCAGAAACTTCTaGCTAAAAGCCTGGAATCCT +
Preference number: 5 (lower is better)
Translates to: SPCKLACATGSVPSACAITCRNF*LKAWNP
Trigger: AGGATTCCAGGCTTTTAGCAAGAAGTTTCTGCAAGT...AATTGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp GGCCATCTGGAAATTCATGAGACAAGATTAAACCGAGTCCCTGCAAGTTGGCATGGCAAGGGTTCCAGCTaGCTCTCATACTGCCAAACC +
Preference number: 5 (lower is better)
Translates to: GHLEIHETRLNRVPASWHGKGSS*LSYCQT
Trigger: GGTTTGGCAGTATGAGAGCAAGCTGGAACCCTTGCC...ATGCCAACTTGCAGGGACTCGGTTTAATCTTGTCTCATGAATTTCCAGATGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp AGTCCCTGCAAGTTGGCATGCGCTACGGGGTCTGTGCCTTCTGCATGTGCAATTCCGATCGTACTCCTCTaGTATTTCATTTTCCAGCAA +
Preference number: 5 (lower is better)
Translates to: SPCKLACATGSVPSACAIPIVLL*YFIFQQ
Trigger: TTGCTGGAAAATGAAATACAAGAGGAGTACGATCGG...AATTGCACATGCAGAAGGCACAGACCCCGTAGCGCATGCCAACTTGCAGGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp CAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAAGGGTCCGCAGAAGGTaGCTGCACTCTACAGCAGAC +
Preference number: 5 (lower is better)
Translates to: QNIRVENLAVTTQTIASARVRRR*LHSTAD
Trigger: GTCTGCTGTAGAGTGCAGCAACCTTCTGCGGACCCT...TGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp GTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTGCTCAGTCCGGCAAAGTCTTCTTCTaGTTGCAAAGCGAGAGACTT +
Preference number: 5 (lower is better)
Translates to: VPGPYYANRGSNDCTAQSGKVFF*LQSERL
Trigger: AAGTCTCTCGCTTTGCAACAAGAAGAAGACTTTGCC...GGACTGAGCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CAA 90 bp CAGAGGCTCCAACGATTGCACTGCTCAGTCCGAGGTAACTCATCTATGTTTGGGTTCAGAAGCTCTCCCTaGCTTTTACTCTTGGACCGT +
Preference number: 5 (lower is better)
Translates to: QRLQRLHCSVRGNSSMFGFRSSP*LLLLDR
Trigger: ACGGTCCAAGAGTAAAAGCAAGGGAGAGCTTCTGAA...CCCAAACATAGATGAGTTACCTCGGACTGAGCAGTGCAATCGTTGGAGCCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CAA 90 bp CAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCTCTTGCTCAGGGCTaGGTGCAGGACAGTAGAGAC +
Preference number: 5 (lower is better)
Translates to: QNIRVENLAVTTQTIASAALAQG*VQDSRD
Trigger: GTCTCTACTGTCCTGCACCAAGCCCTGAGCAAGAGC...TGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp GTTGTGCATTATAAACACACAAACACCGGCGGGCAGGAGAAAATCATCCCTTCTAGTAATGTCTGGCTCTaGCTCAGGGCTTGGTGCAGG +
Preference number: 5 (lower is better)
Translates to: VVHYKHTNTGGQEKIIPSSNVWL*LRAWCR
Trigger: CCTGCACCAAGCCCTGAGCAAGAGCCAGACATTACT...AGAAGGGATGATTTTCTCCTGCCCGCCGGTGTTTGTGTGTTTATAATGCACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp GGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGAGATCTCCTCGCAGTTaGCCATCTAAGGCTTGCCAC +
Preference number: 5 (lower is better)
Translates to: GGGAERRSVYVLVIWKRVRSPRS*PSKACH
Trigger: GTGGCAAGCCTTAGATGGCAAACTGCGAGGAGATCT...CACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS GCA 90 bp AGGTTGCTGCACTCTACAGCAGACAGCACGTTTCAGCAACTCTTCTaGTTCCTCCATTGCCATCATCTCTCTCTGGTACTGGTTTTCCAT +
Preference number: 5 (lower is better)
Translates to: RLLHSTADSTFQQLF*FLHCHHLSLVLVFH
Trigger: ATGGAAAACCAGTACCAGAGAGAGATGATGGCAATGGAGGAAGCAGAAGAGTTGCTGAAACGTGCTGTCTGCTGTAGAGTGCAGCAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CAA 90 bp CTCCAACGATTGCACTGCTCAGTCCGAGGTAACTCATCTATGTTTGGGACAAACGCTGACGAGGTTGTCTaGGTGTTGTTAACAAGCAGC +
Preference number: 5 (lower is better)
Translates to: LQRLHCSVRGNSSMFGTNADEVV*VLLTSS
Trigger: GCTGCTTGTTAACAACACCAAGACAACCTCGTCAGC...GTTTGTCCCAAACATAGATGAGTTACCTCGGACTGAGCAGTGCAATCGTTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CAA 90 bp CCTTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTGCACTTGCAGAAACTTCTaGCTAAAAGCCTGGAATCCT +
Preference number: 5 (lower is better)
Translates to: PWCSRAILRKQRLQRLHCTCRNF*LKAWNP
Trigger: AGGATTCCAGGCTTTTAGCAAGAAGTTTCTGCAAGT...GCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CAA 90 bp AGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTCAGAATGTCTATCATTaGGTCGTTAAGGGAAAGGTC +
Preference number: 5 (lower is better)
Translates to: RESGCHHTDHSFCSRGWGQNVYH*VVKGKV
Trigger: GACCTTTCCCTTAACGACCAAATGATAGACATTCTG...ACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp GGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTGCTCAGTCCGAGGTACAGAATGTCTATCATTaGGTCGTTAAGGGAAAGGTC +
Preference number: 5 (lower is better)
Translates to: GPYYANRGSNDCTAQSEVQNVYH*VVKGKV
Trigger: GACCTTTCCCTTAACGACCAAATGATAGACATTCTG...TACCTCGGACTGAGCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CAA 90 bp CGATTGCACTGCTCAGTCCGAGGTAACTCATCTATGTTTGGGACAAACTTGCAGCTGCCCGATTCAGGGTaGCAATCTCCAACTCTTCTA +
Preference number: 5 (lower is better)
Translates to: RLHCSVRGNSSMFGTNLQLPDSG*QSPTLL
Trigger: TAGAAGAGTTGGAGATTGCAACCCTGAATCGGGCAG...CTGCAAGTTTGTCCCAAACATAGATGAGTTACCTCGGACTGAGCAGTGCAATCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CAA 90 bp GGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTGCTCAGTCCGAGGTACCGATCGTACTCCTCTaGTATTTCATTTTCCAGCAA +
Preference number: 5 (lower is better)
Translates to: GPYYANRGSNDCTAQSEVPIVLL*YFIFQQ
Trigger: TTGCTGGAAAATGAAATACAAGAGGAGTACGATCGG...TACCTCGGACTGAGCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CAA 90 bp GAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCAGAGGATGGGGTGTGTTGTCCAACTTCTGCTaGATTGAAAAGACTTCTGTC +
Preference number: 5 (lower is better)
Translates to: ESGCHHTDHSFCSRGWGVLSNFC*IEKTSV
Trigger: GACAGAAGTCTTTTCAATCAAGCAGAAGTTGGACAA...CACACCCCATCCTCTGCTGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp GGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGCCCTTGCTTTTACTCTaGGACCGTGACTTTCTCACC +
Preference number: 5 (lower is better)
Translates to: GGGAERRSVYVLVIWKRVPLLLL*DRDFLT
Trigger: GGTGAGAAAGTCACGGTCCAAGAGTAAAAGCAAGGG...CACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp CTCCAACGATTGCACTGCTCAGTCCGAGGTAACTCATCTATGTTTGGGACAAACCCCTTGCTTTTACTCTaGGACCGTGACTTTCTCACC +
Preference number: 5 (lower is better)
Translates to: LQRLHCSVRGNSSMFGTNPLLLL*DRDFLT
Trigger: GGTGAGAAAGTCACGGTCCAAGAGTAAAAGCAAGGG...GTTTGTCCCAAACATAGATGAGTTACCTCGGACTGAGCAGTGCAATCGTTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CAA 90 bp TTCCTTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTCACGACACTGTTCTGTaGTTCCTCTCTCAAACACTG +
Preference number: 5 (lower is better)
Translates to: FLGVPGPYYANRGSNDCTHDTVL*FLSQTL
Trigger: CAGTGTTTGAGAGAGGAACAACAGAACAGTGTCGTG...AGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CAA 90 bp GTAACAAATACAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATCGAGGGGACAGGGATTaGCTTTGCCAAGGGACGCAG +
Preference number: 5 (lower is better)
Translates to: VTNTKHKSRESGCHHTDHRGDRD*LCQGTQ
Trigger: CTGCGTCCCTTGGCAAAGCAAATCCCTGTCCCCTCG...ATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTGTATTTGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310917.6
CDS-3UTR CAA 90 bp GGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGTCCCTTGAACTTCTCTaGAAATGTCCCCATACAGGC +
Preference number: 5 (lower is better)
Translates to: GGGAERRSVYVLVIWKRVSLELL*KCPHTG
Trigger: GCCTGTATGGGGACATTTCAAGAGAAGTTCAAGGGA...CACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp GTTGTGCATTATAAACACACAAACACCGGCGGGCAGGAGAAAATCATCCCTTCTCTGCCCGATTCAGGGTaGCAATCTCCAACTCTTCTA +
Preference number: 5 (lower is better)
Translates to: VVHYKHTNTGGQEKIIPSLPDSG*QSPTLL
Trigger: TAGAAGAGTTGGAGATTGCAACCCTGAATCGGGCAG...AGAAGGGATGATTTTCTCCTGCCCGCCGGTGTTTGTGTGTTTATAATGCACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp CCAGCTTCACGAACTCTGCTTCTCGCCACGCAGTCTGAAATTGCTGCAGCAGAATTGTCCAACTTCTGCTaGATTGAAAAGACTTCTGTC +
Preference number: 5 (lower is better)
Translates to: PASRTLLLATQSEIAAAELSNFC*IEKTSV
Trigger: GACAGAAGTCTTTTCAATCAAGCAGAAGTTGGACAA...TTCTGCTGCAGCAATTTCAGACTGCGTGGCGAGAAGCAGAGTTCGTGAAGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CAA 90 bp CAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAAGATCTCCTCGCAGTTaGCCATCTAAGGCTTGCCAC +
Preference number: 5 (lower is better)
Translates to: QNIRVENLAVTTQTIASARSPRS*PSKACH
Trigger: GTGGCAAGCCTTAGATGGCAAACTGCGAGGAGATCT...TGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp GTTGTGCATTATAAACACACAAACACCGGCGGGCAGGAGAAAATCATCCCTTCTTCCCTTGAACTTCTCTaGAAATGTCCCCATACAGGC +
Preference number: 5 (lower is better)
Translates to: VVHYKHTNTGGQEKIIPSSLELL*KCPHTG
Trigger: GCCTGTATGGGGACATTTCAAGAGAAGTTCAAGGGA...AGAAGGGATGATTTTCTCCTGCCCGCCGGTGTTTGTGTGTTTATAATGCACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp TGGCTGCACAGGGTTGCAAAGGTGTCTGCCTCCATGTTTTCCAACAAGTCTTCTACTTGCAGAAACTTCTaGCTAAAAGCCTGGAATCCT +
Preference number: 5 (lower is better)
Translates to: WLHRVAKVSASMFSNKSSTCRNF*LKAWNP
Trigger: AGGATTCCAGGCTTTTAGCAAGAAGTTTCTGCAAGT...AGAAGACTTGTTGGAAAACATGGAGGCAGACACCTTTGCAACCCTGTGCAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CAA 90 bp TTGTCAGGATTGGCTCCTCCAAGTCATCCTCGTCATGAGGGCCATGACATTGTGTTGTCCAACTTCTGCTaGATTGAAAAGACTTCTGTC +
Preference number: 5 (lower is better)
Translates to: LSGLAPPSHPRHEGHDIVLSNFC*IEKTSV
Trigger: GACAGAAGTCTTTTCAATCAAGCAGAAGTTGGACAA...CACAATGTCATGGCCCTCATGACGAGGATGACTTGGAGGAGCCAATCCTGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS-3UTR CAA 90 bp TGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTGCTCATCCTGCTTTAAGTCATaGTCCAACTTCTGCTTGATT +
Preference number: 5 (lower is better)
Translates to: WCSRAILRKQRLQRLHCSSCFKS*SNFCLI
Trigger: AATCAAGCAGAAGTTGGACAATGACTTAAAGCAGGA...TGAGCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS CCA 90 bp TGTGCAGTTCATTTCTCTGGAAAACAGCCAGCTGTCTGTGAGCTTTaGCAAAGTCTTCTTCTTGTTGCAAAGCGAGAGACTTCCTCAAGT +
Preference number: 5 (lower is better)
Translates to: CAVHFSGKQPAVCEL*QSLLLVAKRETSSS
Trigger: ACTTGAGGAAGTCTCTCGCTTTGCAACAAGAAGAAGACTTTGCCAAAGCTCACAGACAGCTGGCTGTTTTCCAGAGAAATGAACTGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310917.6
ENST00000344408.10
ENST00000475313.5
ENST00000509670.1
CDS-3UTR CAA 90 bp GTGTGGCCAACTTCCTTTTCCAGAGAATATCATCCTCTCTCTGAGAGGGAGACAAAAGGCATCTCCCACTaGCAGAAACTTCTTGCTAAA +
Preference number: 5 (lower is better)
Translates to: VWPTSFSREYHPLSERETKGISH*QKLLAK
Trigger: TTTAGCAAGAAGTTTCTGCAAGTGGGAGATGCCTTT...TGTCTCCCTCTCAGAGAGAGGATGATATTCTCTGGAAAAGGAAGTTGGCCACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS-3UTR CAA 90 bp GTAACAAATACAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATGGCAAGGGTTCCAGCTaGCTCTCATACTGCCAAACC +
Preference number: 5 (lower is better)
Translates to: VTNTKHKSRESGCHHTDHGKGSS*LSYCQT
Trigger: GGTTTGGCAGTATGAGAGCAAGCTGGAACCCTTGCC...ATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTGTATTTGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp TGGGGAGGTGGGGCTGAAAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGACAGAATGTCTATCATTaGGTCGTTAAGGGAAAGGTC +
Preference number: 5 (lower is better)
Translates to: WGGGAERRSVYVLVIWKRQNVYH*VVKGKV
Trigger: GACCTTTCCCTTAACGACCAAATGATAGACATTCTG...TCTCTTCCATATCACAAGGACATAAACACTCCTTCTTTCAGCCCCACCTCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp ATATGGAAGAGAGTGGGCCATCTGGAAATTCATGAGACAAGATTAAACCGAGTCCTGCCCGATTCAGGGTaGCAATCTCCAACTCTTCTA +
Preference number: 5 (lower is better)
Translates to: IWKRVGHLEIHETRLNRVLPDSG*QSPTLL
Trigger: TAGAAGAGTTGGAGATTGCAACCCTGAATCGGGCAG...GACTCGGTTTAATCTTGTCTCATGAATTTCCAGATGGCCCACTCTCTTCCATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp GGCCATCTGGAAATTCATGAGACAAGATTAAACCGAGTCCCTGCAAGTTGGCATGGCAAAGTCTTCTTCTaGTTGCAAAGCGAGAGACTT +
Preference number: 5 (lower is better)
Translates to: GHLEIHETRLNRVPASWHGKVFF*LQSERL
Trigger: AAGTCTCTCGCTTTGCAACAAGAAGAAGACTTTGCC...ATGCCAACTTGCAGGGACTCGGTTTAATCTTGTCTCATGAATTTCCAGATGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp AAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATCCCTTGCTTTTACTCTaGGACCGTGACTTTCTCACC +
Preference number: 5 (lower is better)
Translates to: KKECLCPCDMEESGPSGNPLLLL*DRDFLT
Trigger: GGTGAGAAAGTCACGGTCCAAGAGTAAAAGCAAGGG...ATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp GTAACAAATACAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATAGTAATGTCTGGCTCTaGCTCAGGGCTTGGTGCAGG +
Preference number: 5 (lower is better)
Translates to: VTNTKHKSRESGCHHTDHSNVWL*LRAWCR
Trigger: CCTGCACCAAGCCCTGAGCAAGAGCCAGACATTACT...ATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTGTATTTGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp CAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCACACGACACTGTTCTGTaGTTCCTCTCTCAAACACTG +
Preference number: 5 (lower is better)
Translates to: QNIRVENLAVTTQTIASAHDTVL*FLSQTL
Trigger: CAGTGTTTGAGAGAGGAACAACAGAACAGTGTCGTG...TGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp GTTGTGCATTATAAACACACAAACACCGGCGGGCAGGAGAAAATCATCCCTTCTGCCCTCATGGCCTTTTaGGCATTCAAAAAGTTCTTC +
Preference number: 5 (lower is better)
Translates to: VVHYKHTNTGGQEKIIPSALMAF*AFKKFF
Trigger: GAAGAACTTTTTGAATGCCAAAAAGGCCATGAGGGC...AGAAGGGATGATTTTCTCCTGCCCGCCGGTGTTTGTGTGTTTATAATGCACAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp TTGGTGTTCCAGGGCCATATTACGCAAACAGAGGCTCCAACGATTGCACTGCTCATGTTTGGGACAAACTaGCAGGTAAGTTCTCATTTT +
Preference number: 5 (lower is better)
Translates to: LVFQGHITQTEAPTIALLMFGTN*QVSSHF
Trigger: AAAATGAGAACTTACCTGCAAGTTTGTCCCAAACAT...GAGCAGTGCAATCGTTGGAGCCTCTGTTTGCGTAATATGGCCCTGGAACACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475313.5
CDS TCA 90 bp AAGATACTGTGCAGTTCATTTCTCTGGAAAACAGCCAGCTGTCTGTaGGCTTTGGCAAAGTCTTCTTCTTGTTGCAAAGCGAGAGACTTC +
Preference number: 5 (lower is better)
Translates to: KILCSSFLWKTASCL*ALAKSSSCCKARDF
Trigger: GAAGTCTCTCGCTTTGCAACAAGAAGAAGACTTTGCCAAAGCTCACAGACAGCTGGCTGTTTTCCAGAGAAATGAACTGCACAGTATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310917.6
ENST00000344408.10
ENST00000475313.5
ENST00000509670.1
CDS-3UTR CAA 90 bp GGCCATCTGGAAATTCATGAGACAAGATTAAACCGAGTCCCTGCAAGTTGGCATAAAGGCATCTCCCACTaGCAGAAACTTCTTGCTAAA +
Preference number: 5 (lower is better)
Translates to: GHLEIHETRLNRVPASWHKGISH*QKLLAK
Trigger: TTTAGCAAGAAGTTTCTGCAAGTGGGAGATGCCTTT...ATGCCAACTTGCAGGGACTCGGTTTAATCTTGTCTCATGAATTTCCAGATGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp CAAAACATAAGAGTAGAGAATCTGGCTGTCACCACACAGACCATAGCTTCTGCAGCCCTCATGGCCTTTTaGGCATTCAAAAAGTTCTTC +
Preference number: 5 (lower is better)
Translates to: QNIRVENLAVTTQTIASAALMAF*AFKKFF
Trigger: GAAGAACTTTTTGAATGCCAAAAAGGCCATGAGGGC...TGCAGAAGCTATGGTCTGTGTGGTGACAGCCAGATTCTCTACTCTTATGTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp AAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATGGCAAAGTCTTCTTCTaGTTGCAAAGCGAGAGACTT +
Preference number: 5 (lower is better)
Translates to: KKECLCPCDMEESGPSGNGKVFF*LQSERL
Trigger: AAGTCTCTCGCTTTGCAACAAGAAGAAGACTTTGCC...ATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp GTTGTGCATTATAAACACACAAACACCGGCGGGCAGGAGAAAATCATCCCTTCTTTGTCCAACTTCTGCTaGATTGAAAAGACTTCTGTC +
Preference number: 5 (lower is better)
Translates to: VVHYKHTNTGGQEKIIPSLSNFC*IEKTSV
Trigger: GACAGAAGTCTTTTCAATCAAGCAGAAGTTGGACAA...AGAAGGGATGATTTTCTCCTGCCCGCCGGTGTTTGTGTGTTTATAATGCACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp GGCCATCTGGAAATTCATGAGACAAGATTAAACCGAGTCCCTGCAAGTTGGCATTCCTGCTTTAAGTCATaGTCCAACTTCTGCTTGATT +
Preference number: 5 (lower is better)
Translates to: GHLEIHETRLNRVPASWHSCFKS*SNFCLI
Trigger: AATCAAGCAGAAGTTGGACAATGACTTAAAGCAGGA...ATGCCAACTTGCAGGGACTCGGTTTAATCTTGTCTCATGAATTTCCAGATGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp AAGAAGGAGTGTTTATGTCCTTGTGATATGGAAGAGAGTGGGCCATCTGGAAATCCGATCGTACTCCTCTaGTATTTCATTTTCCAGCAA +
Preference number: 5 (lower is better)
Translates to: KKECLCPCDMEESGPSGNPIVLL*YFIFQQ
Trigger: TTGCTGGAAAATGAAATACAAGAGGAGTACGATCGG...ATTTCCAGATGGCCCACTCTCTTCCATATCACAAGGACATAAACACTCCTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS-3UTR CAA 90 bp ATATGGAAGAGAGTGGGCCATCTGGAAATTCATGAGACAAGATTAAACCGAGTCTCCTGCTTTAAGTCATaGTCCAACTTCTGCTTGATT +
Preference number: 5 (lower is better)
Translates to: IWKRVGHLEIHETRLNRVSCFKS*SNFCLI
Trigger: AATCAAGCAGAAGTTGGACAATGACTTAAAGCAGGA...GACTCGGTTTAATCTTGTCTCATGAATTTCCAGATGGCCCACTCTCTTCCATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000344408.10
CDS CCA 72 bp GGGATCCTCAGGCCGGGCCCAGACCTAGGAGCCACCTaGGGATCCCGGGGTGGCTGCGCGCCGAGGGGGCGC +
Preference number: 6 (lower is better)
Translates to: GILRPGPDLGAT*GSRGGCAPRGR
Trigger: GCGCCCCCTCGGCGCGCAGCCACCCCGGGATCCCCAGGTGGCTCCTAGGTCTGGGCCCGGCCTGAGGATCCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344408.10
CDS CCA 72 bp GCCCTGGGCCGGCCCGGGTGCCCCTCGCATTCCCAGTaGGAAACAGGCCAGCCGCTGGGCCACCTCTCTGGG +
Preference number: 6 (lower is better)
Translates to: ALGRPGCPSHSQ*ETGQPLGHLSG
Trigger: CCCAGAGAGGTGGCCCAGCGGCTGGCCTGTTTCCCACTGGGAATGCGAGGGGCACCCGGGCCGGCCCAGGGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000475313.5
CDS TCA 72 bp TCCCTGCCTAGGTCCTGGGTGACAGCTGACACCTGTTaGCGGGGGAGGGCTCCACTCCCGCCAGCCTTCCTG +
Preference number: 6 (lower is better)
Translates to: SLPRSWVTADTC*RGRAPLPPAFL
Trigger: CAGGAAGGCTGGCGGGAGTGGAGCCCTCCCCCGTCAACAGGTGTCAGCTGTCACCCAGGACCTAGGCAGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000475313.5
CDS TCA 72 bp GGGCCAAATCATACAGGGCAAGTCCAGGGTCGCTGGTaGAGTCCAAGCCGGCAGCTGCCACACCCCGAGGAA +
Preference number: 6 (lower is better)
Translates to: GPNHTGQVQGRW*SPSRQLPHPEE
Trigger: TTCCTCGGGGTGTGGCAGCTGCCGGCTTGGACTTCACCAGCGACCCTGGACTTGCCCTGTATGATTTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS GCA 72 bp AAGTCCAGGGTCGCTGGTGAAGTCCAAGCCGGCAGCTaGCACACCCCGAGGAAGGTCTCCAGTTTCCCTCGA +
Preference number: 6 (lower is better)
Translates to: KSRVAGEVQAGS*HTPRKVSSFPR
Trigger: TCGAGGGAAACTGGAGACCTTCCTCGGGGTGTGGCAGCTGCCGGCTTGGACTTCACCAGCGACCCTGGACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS GCA 72 bp TGGCCGCAGAGAAGGAAAAGGACCCTCACTTCCGGTTaGGTTCAGTGCAGACCAGCTGAGCACCCACTGCCC +
Preference number: 6 (lower is better)
Translates to: WPQRRKRTLTSG*VQCRPAEHPLP
Trigger: GGGCAGTGGGTGCTCAGCTGGTCTGCACTGAACGCAACCGGAAGTGAGGGTCCTTTTCCTTCTCTGCGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000475313.5
CDS TCA 72 bp TTTTGTGTGCTTCCTCATCCCTGCCTAGGTCCTGGGTaGCAGCTGACACCTGTTGACGGGGGAGGGCTCCAC +
Preference number: 6 (lower is better)
Translates to: FCVLPHPCLGPG*QLTPVDGGGLH
Trigger: GTGGAGCCCTCCCCCGTCAACAGGTGTCAGCTGTCACCCAGGACCTAGGCAGGGATGAGGAAGCACACAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310917.6
ENST00000475313.5
CDS GCA 72 bp GCTCCTGTTCCAGGCCATGGAGGGTCCGCAGAAGGTTaGTGCACTCTACAGCAGACCTCTCACCAGCACGTT +
Preference number: 6 (lower is better)
Translates to: APVPGHGGSAEG*CTLQQTSHQHV
Trigger: AACGTGCTGGTGAGAGGTCTGCTGTAGAGTGCAGCAACCTTCTGCGGACCCTCCATGGCCTGGAACAGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310917.6
ENST00000344408.10
ENST00000475313.5
CDS CAA 72 bp TGCTCCTGTTCCAGGCCATGGAGGGTCCGCAGAAGGTaGCTGCACTCTACAGCAGACCTCTCACCAGCACGT +
Preference number: 6 (lower is better)
Translates to: CSCSRPWRVRRR*LHSTADLSPAR
Trigger: ACGTGCTGGTGAGAGGTCTGCTGTAGAGTGCAGCAACCTTCTGCGGACCCTCCATGGCCTGGAACAGGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310917.6
ENST00000344408.10
ENST00000475313.5
CDS TCA 72 bp TCCCGAGGTCTCCAGCCTGGAGCGTGGCTGCGTAGCTaGCAGCAAAGGCATCTCCCACTTGCAGAAACTTCT +
Preference number: 6 (lower is better)
Translates to: SRGLQPGAWLRS*QQRHLPLAETS
Trigger: AGAAGTTTCTGCAAGTGGGAGATGCCTTTGCTGTCAGCTACGCAGCCACGCTCCAGGCTGGAGACCTCGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310917.6
ENST00000344408.10
ENST00000475313.5
ENST00000509670.1
CDS GCA 72 bp CCTGTTCCAGGCCATGGAGGGTCCGCAGAAGGTTGCTaGACTCTACAGCAGACCTCTCACCAGCACGTTTCA +
Preference number: 6 (lower is better)
Translates to: PVPGHGGSAEGC*TLQQTSHQHVS
Trigger: TGAAACGTGCTGGTGAGAGGTCTGCTGTAGAGTGCAGCAACCTTCTGCGGACCCTCCATGGCCTGGAACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310917.6
ENST00000344408.10
ENST00000475313.5
CDS GCA 72 bp GCTCCTGTTCCAGGCCATGGAGGGTCCGCAGAAGGTTaGTGCACTCTACAGCAGACAGCACGTTTCAGCAAC +
Preference number: 6 (lower is better)
Translates to: APVPGHGGSAEG*CTLQQTARFSN
Trigger: GTTGCTGAAACGTGCTGTCTGCTGTAGAGTGCAGCAACCTTCTGCGGACCCTCCATGGCCTGGAACAGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS CCA 72 bp GCGAGAGACTTCCTCAAGTGCTCCTGTTCCAGGCCATaGAGGGTCCGCAGAAGGTTGCTGCACTCTACAGCA +
Preference number: 6 (lower is better)
Translates to: ARDFLKCSCSRP*RVRRRLLHSTA
Trigger: TGCTGTAGAGTGCAGCAACCTTCTGCGGACCCTCCATGGCCTGGAACAGGAGCACTTGAGGAAGTCTCTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310917.6
ENST00000344408.10
ENST00000475313.5
ENST00000509670.1
CDS TCA 72 bp CTCAGCTCAGACGCACTTCCCCTGGGAACGGTTTCCTaGCACACGGATGTGAATCCAGAGTTTCCCCATCCC +
Preference number: 6 (lower is better)
Translates to: LSSDALPLGTVS*HTDVNPEFPHP
Trigger: GGGATGGGGAAACTCTGGATTCACATCCGTGTGTCAGGAAACCGTTCCCAGGGGAAGTGCGTCTGAGCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310917.6
ENST00000475313.5
ENST00000509670.1
CDS CAA 72 bp ACGCCATCAGCTGAGGTGAACGGCAAGGGTTCCAGCTaGCTCTCATACTGCCAAACCCGATGTCTGGTGAGC +
Preference number: 6 (lower is better)
Translates to: TPSAEVNGKGSS*LSYCQTRCLVS
Trigger: GCTCACCAGACATCGGGTTTGGCAGTATGAGAGCAAGCTGGAACCCTTGCCGTTCACCTCAGCTGATGGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310917.6
ENST00000344408.10
ENST00000475313.5
ENST00000509670.1
CDS CAA 72 bp TGCTCCTGTTCCAGGCCATGGAGGGTCCGCAGAAGGTaGCTGCACTCTACAGCAGACAGCACGTTTCAGCAA +
Preference number: 6 (lower is better)
Translates to: CSCSRPWRVRRR*LHSTADSTFQQ
Trigger: TTGCTGAAACGTGCTGTCTGCTGTAGAGTGCAGCAACCTTCTGCGGACCCTCCATGGCCTGGAACAGGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS CAA 90 bp AGCAAGAGCAGCTCCGAGAGGTTGGCTGACGAGGTTGTCTTGGTGTaGTTAACAAGCAGCCATATGCGGGCTGTCTGTGCTTCACTCGAC +
Preference number: 6 (lower is better)
Translates to: SKSSSERLADEVVLV*LTSSHMRAVCASLD
Trigger: GTCGAGTGAAGCACAGACAGCCCGCATATGGCTGCTTGTTAACAACACCAAGACAACCTCGTCAGCCAACCTCTCGGAGCTGCTCTTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310917.6
ENST00000344408.10
ENST00000475313.5
ENST00000509670.1
CDS CAA 90 bp CTGTCCAGCAAGAGCAGCTCCGAGAGGTTGGCTGACGAGGTTGTCTaGGTGTTGTTAACAAGCAGCCATATGCGGGCTGTCTGTGCTTCA +
Preference number: 6 (lower is better)
Translates to: LSSKSSSERLADEVV*VLLTSSHMRAVCAS
Trigger: TGAAGCACAGACAGCCCGCATATGGCTGCTTGTTAACAACACCAAGACAACCTCGTCAGCCAACCTCTCGGAGCTGCTCTTGCTGGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310917.6
ENST00000344408.10
ENST00000475313.5
ENST00000509670.1
CDS GCA 72 bp TCTTCTTCTTGTTGCAAAGCGAGAGACTTCCTCAAGTaGTCCTGTTCCAGGCCATGGAGGGTCCGCAGAAGG +
Preference number: 6 (lower is better)
Translates to: SSSCCKARDFLK*SCSRPWRVRRR
Trigger: CCTTCTGCGGACCCTCCATGGCCTGGAACAGGAGCACTTGAGGAAGTCTCTCGCTTTGCAACAAGAAGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310917.6
ENST00000344408.10
ENST00000475313.5
ENST00000509670.1
CDS CAA 72 bp AAGAGCAGCTCCGAGAGGTTGGCTGACGAGGTTGTCTaGGTGTTGTTAACAAGCAGCCATATGCGGGCTGTC +
Preference number: 6 (lower is better)
Translates to: KSSSERLADEVV*VLLTSSHMRAV
Trigger: GACAGCCCGCATATGGCTGCTTGTTAACAACACCAAGACAACCTCGTCAGCCAACCTCTCGGAGCTGCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310917.6
ENST00000344408.10
ENST00000475313.5
ENST00000509670.1
CDS CAA 72 bp CCAGCAATGCTGTCCAGCAAGAGCAGCTCCGAGAGGTaGGCTGACGAGGTTGTCTTGGTGTTGTTAACAAGC +
Preference number: 6 (lower is better)
Translates to: PAMLSSKSSSER*ADEVVLVLLTS
Trigger: GCTTGTTAACAACACCAAGACAACCTCGTCAGCCAACCTCTCGGAGCTGCTCTTGCTGGACAGCATTGCTGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310917.6
ENST00000344408.10
ENST00000475313.5
ENST00000509670.1
CDS TCA 72 bp AATGCTGTCCAGCAAGAGCAGCTCCGAGAGGTTGGCTaGCGAGGTTGTCTTGGTGTTGTTAACAAGCAGCCA +
Preference number: 6 (lower is better)
Translates to: NAVQQEQLREVG*RGCLGVVNKQP
Trigger: TGGCTGCTTGTTAACAACACCAAGACAACCTCGTCAGCCAACCTCTCGGAGCTGCTCTTGCTGGACAGCATT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310917.6
ENST00000344408.10
ENST00000475313.5
ENST00000509670.1
CDS TCA 72 bp GTCGTTAAGGGAAAGGTCCTCATTCACGCCATCAGCTaGGGTGAACGGCAAGGGTTCCAGCTTGCTCTCATA +
Preference number: 6 (lower is better)
Translates to: VVKGKVLIHAIS*GERQGFQLALI
Trigger: TATGAGAGCAAGCTGGAACCCTTGCCGTTCACCTCAGCTGATGGCGTGAATGAGGACCTTTCCCTTAACGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310917.6
ENST00000344408.10
ENST00000475313.5
ENST00000509670.1
CDS GCA 72 bp GGTGTTGTTAACAAGCAGCCATATGCGGGCTGTCTGTaGTTCACTCGACCCAGACACCAGTGCACATTTCTG +
Preference number: 6 (lower is better)
Translates to: GVVNKQPYAGCL*FTRPRHQCTFL
Trigger: CAGAAATGTGCACTGGTGTCTGGGTCGAGTGAAGCACAGACAGCCCGCATATGGCTGCTTGTTAACAACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310917.6
ENST00000344408.10
ENST00000475313.5
ENST00000509670.1
CDS CAA 90 bp ATGGTGAGACCAGCAATGCTGTCCAGCAAGAGCAGCTCCGAGAGGTaGGCTGACGAGGTTGTCTTGGTGTTGTTAACAAGCAGCCATATG +
Preference number: 6 (lower is better)
Translates to: MVRPAMLSSKSSSER*ADEVVLVLLTSSHM
Trigger: CATATGGCTGCTTGTTAACAACACCAAGACAACCTCGTCAGCCAACCTCTCGGAGCTGCTCTTGCTGGACAGCATTGCTGGTCTCACCAT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310917.6
ENST00000344408.10
ENST00000475313.5
ENST00000509670.1
CDS CAA 90 bp CTGGAAAACAGCCAGCTGTCTGTGAGCTTTGGCAAAGTCTTCTTCTaGTTGCAAAGCGAGAGACTTCCTCAAGTGCTCCTGTTCCAGGCC +
Preference number: 6 (lower is better)
Translates to: LENSQLSVSFGKVFF*LQSERLPQVLLFQA
Trigger: GGCCTGGAACAGGAGCACTTGAGGAAGTCTCTCGCTTTGCAACAAGAAGAAGACTTTGCCAAAGCTCACAGACAGCTGGCTGTTTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310917.6
ENST00000344408.10
ENST00000475313.5
ENST00000509670.1
CDS TCA 72 bp CGATTCAGGGTTGCAATCTCCAACTCTTCTAAGGCTTaGAGCATGCTCCCAGGGTCCTCGGAAGACAGAATG +
Preference number: 6 (lower is better)
Translates to: RFRVAISNSSKA*SMLPGSSEDRM
Trigger: CATTCTGTCTTCCGAGGACCCTGGGAGCATGCTTCAAGCCTTAGAAGAGTTGGAGATTGCAACCCTGAATCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310917.6
ENST00000344408.10
ENST00000475313.5
ENST00000509670.1
CDS GCA 72 bp AGCAGACCTCTCACCAGCACGTTTCAGCAACTCTTCTaGTTCCTCCATTGCCATCATCTCTCTCTGGTACTG +
Preference number: 6 (lower is better)
Translates to: SRPLTSTFQQLF*FLHCHHLSLVL
Trigger: CAGTACCAGAGAGAGATGATGGCAATGGAGGAAGCAGAAGAGTTGCTGAAACGTGCTGGTGAGAGGTCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310917.6
ENST00000344408.10
ENST00000475313.5
CDS CAA 72 bp GACAAGCCTCCAGATCTGCATCTGCCCGATTCAGGGTaGCAATCTCCAACTCTTCTAAGGCTTGAAGCATGC +
Preference number: 6 (lower is better)
Translates to: DKPPDLHLPDSG*QSPTLLRLEAC
Trigger: GCATGCTTCAAGCCTTAGAAGAGTTGGAGATTGCAACCCTGAATCGGGCAGATGCAGATCTGGAGGCTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310917.6
ENST00000344408.10
ENST00000475313.5
ENST00000509670.1
CDS CAA 90 bp TGGCCACTGCTGGTGAGATTTTTCAGCAGAAGGGCAATGATATCCTaGCTGATTTGTGTTCGACAAGCCTCCAGATCTGCATCTGCCCGA +
Preference number: 6 (lower is better)
Translates to: WPLLVRFFSRRAMIS*LICVRQASRSASAR
Trigger: TCGGGCAGATGCAGATCTGGAGGCTTGTCGAACACAAATCAGCAAGGATATCATTGCCCTTCTGCTGAAAAATCTCACCAGCAGTGGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310917.6
ENST00000344408.10
ENST00000475313.5
ENST00000509670.1
CDS TCA 72 bp GGAATGAGCCCATGGCCCACTAGAGGCTGCAGAAGTTaGGAGTGGGATGAAGACTTCCATTTTCTTGTCCAA +
Preference number: 6 (lower is better)
Translates to: GMSPWPTRGCRS*EWDEDFHFLVQ
Trigger: TTGGACAAGAAAATGGAAGTCTTCATCCCACTCTCAACTTCTGCAGCCTCTAGTGGGCCATGGGCTCATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310917.6
ENST00000344408.10
ENST00000475313.5
ENST00000509670.1
CDS GCA 72 bp ATCCTTGCTGATTTGTGTTCGACAAGCCTCCAGATCTaGATCTGCCCGATTCAGGGTTGCAATCTCCAACTC +
Preference number: 6 (lower is better)
Translates to: ILADLCSTSLQI*ICPIQGCNLQL
Trigger: GAGTTGGAGATTGCAACCCTGAATCGGGCAGATGCAGATCTGGAGGCTTGTCGAACACAAATCAGCAAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310917.6
ENST00000344408.10
ENST00000475313.5
ENST00000509670.1
CDS GCA 72 bp CACTCTACAGCAGACAGCACGTTTCAGCAACTCTTCTaGTTCCTCCATTGCCATCATCTCTCTCTGGTACTG +
Preference number: 6 (lower is better)
Translates to: HSTADSTFQQLF*FLHCHHLSLVL
Trigger: CAGTACCAGAGAGAGATGATGGCAATGGAGGAAGCAGAAGAGTTGCTGAAACGTGCTGTCTGCTGTAGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509670.1
CDS CAA 72 bp AGCCAGCTGTCTGTGAGCTTTGGCAAAGTCTTCTTCTaGTTGCAAAGCGAGAGACTTCCTCAAGTGCTCCTG +
Preference number: 6 (lower is better)
Translates to: SQLSVSFGKVFF*LQSERLPQVLL
Trigger: CAGGAGCACTTGAGGAAGTCTCTCGCTTTGCAACAAGAAGAAGACTTTGCCAAAGCTCACAGACAGCTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310917.6
ENST00000344408.10
ENST00000475313.5
ENST00000509670.1
CDS TCA 72 bp TTCTTAGGCCAGGAGGGTATAAAAGCAAATAAGGAATaGGCCCATGGCCCACTAGAGGCTGCAGAAGTTGAG +
Preference number: 6 (lower is better)
Translates to: FLGQEGIKANKE*AHGPLEAAEVE
Trigger: CTCAACTTCTGCAGCCTCTAGTGGGCCATGGGCTCATTCCTTATTTGCTTTTATACCCTCCTGGCCTAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310917.6
ENST00000344408.10
ENST00000475313.5
ENST00000509670.1
CDS CAA 72 bp CTGACAGCAAAGGCATCTCCCACTTGCAGAAACTTCTaGCTAAAAGCCTGGAATCCTTCCGAGGTCCTGTTT +
Preference number: 6 (lower is better)
Translates to: LTAKASPTCRNF*LKAWNPSEVLF
Trigger: AAACAGGACCTCGGAAGGATTCCAGGCTTTTAGCAAGAAGTTTCTGCAAGTGGGAGATGCCTTTGCTGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310917.6
ENST00000344408.10
ENST00000475313.5
ENST00000509670.1
CDS CAA 72 bp ATTTTTCAGCAGAAGGGCAATGATATCCTTGCTGATTaGTGTTCGACAAGCCTCCAGATCTGCATCTGCCCG +
Preference number: 6 (lower is better)
Translates to: IFQQKGNDILAD*CSTSLQICICP
Trigger: CGGGCAGATGCAGATCTGGAGGCTTGTCGAACACAAATCAGCAAGGATATCATTGCCCTTCTGCTGAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310917.6
ENST00000344408.10
ENST00000475313.5
ENST00000509670.1
CDS TCA 72 bp TGCAGTTCATTTCTCTGGAAAACAGCCAGCTGTCTGTaGGCTTTGGCAAAGTCTTCTTCTTGTTGCAAAGCG +
Preference number: 6 (lower is better)
Translates to: CSSFLWKTASCL*ALAKSSSCCKA
Trigger: CGCTTTGCAACAAGAAGAAGACTTTGCCAAAGCTCACAGACAGCTGGCTGTTTTCCAGAGAAATGAACTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310917.6
ENST00000344408.10
ENST00000475313.5
ENST00000509670.1
CDS CCA 72 bp CATTTCTCTGGAAAACAGCCAGCTGTCTGTGAGCTTTaGCAAAGTCTTCTTCTTGTTGCAAAGCGAGAGACT +
Preference number: 6 (lower is better)
Translates to: HFSGKQPAVCEL*QSLLLVAKRET
Trigger: AGTCTCTCGCTTTGCAACAAGAAGAAGACTTTGCCAAAGCTCACAGACAGCTGGCTGTTTTCCAGAGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310917.6
ENST00000344408.10
ENST00000475313.5
ENST00000509670.1
CDS CAA 72 bp CTGGTGAGATTTTTCAGCAGAAGGGCAATGATATCCTaGCTGATTTGTGTTCGACAAGCCTCCAGATCTGCA +
Preference number: 6 (lower is better)
Translates to: LVRFFSRRAMIS*LICVRQASRSA
Trigger: TGCAGATCTGGAGGCTTGTCGAACACAAATCAGCAAGGATATCATTGCCCTTCTGCTGAAAAATCTCACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310917.6
ENST00000344408.10
ENST00000475313.5
ENST00000509670.1
CDS GCA 72 bp CTTCTTTCTTGTTTCCAGGTCACATTCAGCTGTCAATaGCACCATCTTCCGATCGTACTCCTCTTGTATTTC +
Preference number: 6 (lower is better)
Translates to: LLSCFQVTFSCQ*HHLPIVLLLYF
Trigger: GAAATACAAGAGGAGTACGATCGGAAGATGGTGGCATTGACAGCTGAATGTGACCTGGAAACAAGAAAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310917.6
ENST00000344408.10
ENST00000475313.5
ENST00000509670.1