Pregenerated sensors for EVA1B (Homo sapiens)
Ensembl gene IDs: ENSG00000142694Ensembl transcript IDs: ENST00000270824.1, ENST00000490466.2
Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCAGTAGCACCTGGGAGCTGTGGGGGCCGAGGCAGTCCGAAGGTGTaGGGTAGCTCTGAGCTCATGTGCAGGTCCGGTACCCCGAGCGCC | + |
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Preference number: 1 (lower is better) Translates to: PVAPGSCGGRGSPKV*GSSELMCRSGTPSA Trigger: GGCGCTCGGGGTACCGGACCTGCACATGAGCTCAGAGCTACCCCACACCTTCGGACTGCCTCGGCCCCCACAGCTCCCAGGTGCTACTGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000270824.1 |
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| 3UTR-3UTR GCA 90 bp | CCACGCCCAGTAGCACCTGGGAGCTGTGGGGGCCGAGGCAGTCCGAAGGTGTGGAGCTCTGAGCTCATGTaGAGGTCCGGTACCCCGAGC | + |
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Preference number: 2 (lower is better) Translates to: PRPVAPGSCGGRGSPKVWSSELM*RSGTPS Trigger: GCTCGGGGTACCGGACCTGCACATGAGCTCAGAGCT...CCACACCTTCGGACTGCCTCGGCCCCCACAGCTCCCAGGTGCTACTGGGCGTGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000270824.1 |
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| 3UTR-3UTR GCA 90 bp | CATTTGGTCACTTCACCTCTTCATCGACCCCAGAGAGGGAGTGGGGACCCTGCAGTACCCCGAGCGCCTTaGAGCGGGAGCCGGGGCCCA | + |
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Preference number: 2 (lower is better) Translates to: HLVTSPLHRPQRGSGDPAVPRAP*SGSRGP Trigger: TGGGCCCCGGCTCCCGCTGCAAGGCGCTCGGGGTAC...TGCAGGGTCCCCACTCCCTCTCTGGGGTCGATGAAGAGGTGAAGTGACCAAATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000270824.1 |
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| 3UTR CCA 72 bp | TTCTGGCAGGACTGGGGAAGGGAGCCTCTCAGGGGGTaGCGGTCCACGCCCAGTAGCACCTGGGAGCTGTGG | + |
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Preference number: 3 (lower is better) Translates to: FWQDWGREPLRG*RSTPSSTWELW Trigger: CCACAGCTCCCAGGTGCTACTGGGCGTGGACCGCCACCCCCTGAGAGGCTCCCTTCCCCAGTCCTGCCAGAA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000270824.1 |
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| 3UTR GCA 72 bp | GGCAGTCCGAAGGTGTGGGGTAGCTCTGAGCTCATGTaGAGGTCCGGTACCCCGAGCGCCTTGCAGCGGGAG | + |
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Preference number: 3 (lower is better) Translates to: GSPKVWGSSELM*RSGTPSALQRE Trigger: CTCCCGCTGCAAGGCGCTCGGGGTACCGGACCTGCACATGAGCTCAGAGCTACCCCACACCTTCGGACTGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000270824.1 |
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| 3UTR CCA 72 bp | CCTGGGAGCTGTGGGGGCCGAGGCAGTCCGAAGGTGTaGGGTAGCTCTGAGCTCATGTGCAGGTCCGGTACC | + |
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Preference number: 3 (lower is better) Translates to: PGSCGGRGSPKV*GSSELMCRSGT Trigger: GGTACCGGACCTGCACATGAGCTCAGAGCTACCCCACACCTTCGGACTGCCTCGGCCCCCACAGCTCCCAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000270824.1 |
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| CDS-3UTR GCA 90 bp | TGGCGGTCCACGCCCAGTAGCACCTGGGAGCTGTGGGGGCCGAGGCAGTCCGAAGCCCCAGCGTGCCTGTaGCCAGCAGGTCCGGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: WRSTPSSTWELWGPRQSEAPACL*PAGPAA Trigger: GGCAGCCGGACCTGCTGGGCACAGGCACGCTGGGGC...TTCGGACTGCCTCGGCCCCCACAGCTCCCAGGTGCTACTGGGCGTGGACCGCCA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000270824.1 |
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| CDS-3UTR GCA 90 bp | TGGCGGTCCACGCCCAGTAGCACCTGGGAGCTGTGGGGGCCGAGGCAGTCCGAAGTACCCCGAGCGCCTTaGAGCGGGAGCCGGGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: WRSTPSSTWELWGPRQSEVPRAP*SGSRGP Trigger: TGGGCCCCGGCTCCCGCTGCAAGGCGCTCGGGGTAC...TTCGGACTGCCTCGGCCCCCACAGCTCCCAGGTGCTACTGGGCGTGGACCGCCA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000270824.1 |
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| CDS-3UTR TCA 90 bp | TGGCGGTCCACGCCCAGTAGCACCTGGGAGCTGTGGGGGCCGAGGCAGTCCGAACGAGCAGGCAGAGGGTaGGCAGCAGGCCGAAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: WRSTPSSTWELWGPRQSERAGRG*AAGRSR Trigger: TCTGCTTCGGCCTGCTGCTCACCCTCTGCCTGCTCG...TTCGGACTGCCTCGGCCCCCACAGCTCCCAGGTGCTACTGGGCGTGGACCGCCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000270824.1 |
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| CDS-3UTR CCA 90 bp | ACGCCCAGTAGCACCTGGGAGCTGTGGGGGCCGAGGCAGTCCGAAGGTGTGGGGGCATCCATGCTGCTCTaGGGGGCAGCTCCCCTACCA | + |
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Preference number: 4 (lower is better) Translates to: TPSSTWELWGPRQSEGVGASMLL*GAAPLP Trigger: TGGTAGGGGAGCTGCCCCCCAGAGCAGCATGGATGC...CCCCACACCTTCGGACTGCCTCGGCCCCCACAGCTCCCAGGTGCTACTGGGCGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000270824.1 |
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| CDS-3UTR CCA 90 bp | TCTGGCAGGACTGGGGAAGGGAGCCTCTCAGGGGGTGGCGGTCCACGCCCAGTAACCCCAGAGAGGGAGTaGGGACCCTGCATGCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: SGRTGEGSLSGGGGPRPVTPERE*GPCMLP Trigger: GGGCAGCATGCAGGGTCCCCACTCCCTCTCTGGGGT...TACTGGGCGTGGACCGCCACCCCCTGAGAGGCTCCCTTCCCCAGTCCTGCCAGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000270824.1 |
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| CDS-3UTR CCA 90 bp | CTGGGAGCTGTGGGGGCCGAGGCAGTCCGAAGGTGTGGGGTAGCTCTGAGCTCAAGCACCTGGGAGCTGTaGGGGCCGAGGCAGTCCGAA | + |
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Preference number: 4 (lower is better) Translates to: LGAVGAEAVRRCGVALSSSTWEL*GPRQSE Trigger: TTCGGACTGCCTCGGCCCCCACAGCTCCCAGGTGCT...TGAGCTCAGAGCTACCCCACACCTTCGGACTGCCTCGGCCCCCACAGCTCCCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000270824.1 |
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| CDS-3UTR CCA 90 bp | TCTGAGCTCATGTGCAGGTCCGGTACCCCGAGCGCCTTGCAGCGGGAGCCGGGGGTCTTCTGGCAGGACTaGGGAAGGGAGCCTCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: SELMCRSGTPSALQREPGVFWQD*GREPLR Trigger: CCTGAGAGGCTCCCTTCCCCAGTCCTGCCAGAAGAC...CCCCGGCTCCCGCTGCAAGGCGCTCGGGGTACCGGACCTGCACATGAGCTCAGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000270824.1 |
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| CDS-3UTR CCA 90 bp | CCAGTAGCACCTGGGAGCTGTGGGGGCCGAGGCAGTCCGAAGGTGTGGGGTAGCTCCCCAGACCCATGCTaGACTGGAAGGGAGGGGACT | + |
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Preference number: 4 (lower is better) Translates to: PVAPGSCGGRGSPKVWGSSPDPC*TGREGT Trigger: AGTCCCCTCCCTTCCAGTCCAGCATGGGTCTGGGGA...GCTACCCCACACCTTCGGACTGCCTCGGCCCCCACAGCTCCCAGGTGCTACTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000270824.1 |
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| CDS-3UTR TCA 90 bp | CCTGGGAGCTGTGGGGGCCGAGGCAGTCCGAAGGTGTGGGGTAGCTCTGAGCTCCAGCCAGGCTGTTGCTaGGCAACTCCATGTCCCTTC | + |
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Preference number: 4 (lower is better) Translates to: PGSCGGRGSPKVWGSSELQPGCC*ATPCPF Trigger: GAAGGGACATGGAGTTGCTCAGCAACAGCCTGGCTG...GAGCTCAGAGCTACCCCACACCTTCGGACTGCCTCGGCCCCCACAGCTCCCAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000270824.1 |
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| CDS-3UTR CCA 90 bp | CATTTGGTCACTTCACCTCTTCATCGACCCCAGAGAGGGAGTGGGGACCCTGCAACGCCCAGTAGCACCTaGGAGCTGTGGGGGCCGAGG | + |
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Preference number: 4 (lower is better) Translates to: HLVTSPLHRPQRGSGDPATPSST*ELWGPR Trigger: CCTCGGCCCCCACAGCTCCCAGGTGCTACTGGGCGT...TGCAGGGTCCCCACTCCCTCTCTGGGGTCGATGAAGAGGTGAAGTGACCAAATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000270824.1 |
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| CDS-3UTR CCA 90 bp | CATTTGGTCACTTCACCTCTTCATCGACCCCAGAGAGGGAGTGGGGACCCTGCAGAGCCTCTCAGGGGGTaGCGGTCCACGCCCAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: HLVTSPLHRPQRGSGDPAEPLRG*RSTPSS Trigger: GCTACTGGGCGTGGACCGCCACCCCCTGAGAGGCTC...TGCAGGGTCCCCACTCCCTCTCTGGGGTCGATGAAGAGGTGAAGTGACCAAATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000270824.1 |
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| CDS-3UTR GCA 90 bp | GCAGCTTTCTTTCATTTGGTCACTTCACCTCTTCATCGACCCCAGAGAGGGAGTCCCAGCAGGTCCGGCTaGCCGGTGCGCCAGATCTCC | + |
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Preference number: 4 (lower is better) Translates to: AAFFHLVTSPLHRPQRGSPSRSG*PVRQIS Trigger: GGAGATCTGGCGCACCGGGCAGCCGGACCTGCTGGG...ACTCCCTCTCTGGGGTCGATGAAGAGGTGAAGTGACCAAATGAAAGAAAGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000270824.1 |
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| CDS-3UTR CCA 90 bp | TCATTTGGTCACTTCACCTCTTCATCGACCCCAGAGAGGGAGTGGGGACCCTGCAGACCCATGCTGGACTaGAAGGGAGGGGACTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: SFGHFTSSSTPEREWGPCRPMLD*KGGDCP Trigger: TGGACAGTCCCCTCCCTTCCAGTCCAGCATGGGTCT...GCAGGGTCCCCACTCCCTCTCTGGGGTCGATGAAGAGGTGAAGTGACCAAATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000270824.1 |
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| CDS-3UTR CCA 90 bp | CATTTGGTCACTTCACCTCTTCATCGACCCCAGAGAGGGAGTGGGGACCCTGCAGGCAGTCCGAAGGTGTaGGGTAGCTCTGAGCTCATG | + |
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Preference number: 4 (lower is better) Translates to: HLVTSPLHRPQRGSGDPAGSPKV*GSSELM Trigger: CATGAGCTCAGAGCTACCCCACACCTTCGGACTGCC...TGCAGGGTCCCCACTCCCTCTCTGGGGTCGATGAAGAGGTGAAGTGACCAAATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000270824.1 |
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| CDS-3UTR GCA 90 bp | AGAATGCAGCTTTCTTTCATTTGGTCACTTCACCTCTTCATCGACCCCAGAGAGGGTCCGGCTGCCCGGTaGGCCAGATCTCCCGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: RMQLSFIWSLHLFIDPREGPAAR*ARSPAG Trigger: TCCTGCGGGAGATCTGGCGCACCGGGCAGCCGGACC...CTCTCTGGGGTCGATGAAGAGGTGAAGTGACCAAATGAAAGAAAGCTGCATTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000270824.1 |
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| CDS-3UTR GCA 90 bp | TTTCATTTGGTCACTTCACCTCTTCATCGACCCCAGAGAGGGAGTGGGGACCCTAGCTCTGAGCTCATGTaGAGGTCCGGTACCCCGAGC | + |
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Preference number: 4 (lower is better) Translates to: FHLVTSPLHRPQRGSGDPSSELM*RSGTPS Trigger: GCTCGGGGTACCGGACCTGCACATGAGCTCAGAGCT...AGGGTCCCCACTCCCTCTCTGGGGTCGATGAAGAGGTGAAGTGACCAAATGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000270824.1 |
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| CDS-3UTR TCA 90 bp | ATTTGGTCACTTCACCTCTTCATCGACCCCAGAGAGGGAGTGGGGACCCTGCATTCTGATCCTAAAGCCTaGGCTAGAAACCACCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: IWSLHLFIDPREGVGTLHSDPKA*ARNHRS Trigger: GGAGCGGTGGTTTCTAGCTCAGGCTTTAGGATCAGA...ATGCAGGGTCCCCACTCCCTCTCTGGGGTCGATGAAGAGGTGAAGTGACCAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000270824.1 |
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| CDS-3UTR GCA 90 bp | AGAATGCAGCTTTCTTTCATTTGGTCACTTCACCTCTTCATCGACCCCAGAGAGATCAGTAATAGTGCATaGGGCCCAGGGTGCCCGTGG | + |
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Preference number: 4 (lower is better) Translates to: RMQLSFIWSLHLFIDPREISNSA*GPGCPW Trigger: CCACGGGCACCCTGGGCCGCATGCACTATTACTGAT...CTCTCTGGGGTCGATGAAGAGGTGAAGTGACCAAATGAAAGAAAGCTGCATTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000270824.1 |
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| CDS-3UTR TCA 90 bp | CATTTGGTCACTTCACCTCTTCATCGACCCCAGAGAGGGAGTGGGGACCCTGCAGAGTCTTGGAGAGATTaGATTGACTTTACCAAAACC | + |
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Preference number: 4 (lower is better) Translates to: HLVTSPLHRPQRGSGDPAESWRD*IDFTKT Trigger: GGTTTTGGTAAAGTCAATTCAATCTCTCCAAGACTC...TGCAGGGTCCCCACTCCCTCTCTGGGGTCGATGAAGAGGTGAAGTGACCAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000270824.1 |
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| CDS GCA 90 bp | GGCCCAGGGTGCCCGTGGCCGTGGGGCTGGGCCCCAGCGTGCCTGTaGCCAGCAGGTCCGGCTGCCCGGTGCGCCAGATCTCCCGCAGGA | + |
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Preference number: 5 (lower is better) Translates to: GPGCPWPWGWAPACL*PAGPAARCARSPAG Trigger: TCCTGCGGGAGATCTGGCGCACCGGGCAGCCGGACCTGCTGGGCACAGGCACGCTGGGGCCCAGCCCCACGGCCACGGGCACCCTGGGCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000270824.1 ENST00000490466.2 |
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| CDS-3UTR CAA 90 bp | ACGCCCAGTAGCACCTGGGAGCTGTGGGGGCCGAGGCAGTCCGAAGGTGTGGGGGTGAAGACGTTGACGTaGAGGGGCCCGTCCGGCTCT | + |
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Preference number: 5 (lower is better) Translates to: TPSSTWELWGPRQSEGVGVKTLT*RGPSGS Trigger: AGAGCCGGACGGGCCCCTCAACGTCAACGTCTTCAC...CCCCACACCTTCGGACTGCCTCGGCCCCCACAGCTCCCAGGTGCTACTGGGCGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000270824.1 |
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| CDS-3UTR CAA 90 bp | AGGACTGGGGAAGGGAGCCTCTCAGGGGGTGGCGGTCCACGCCCAGTAGCACCTGCCGACGTGAAGACGTaGACGTTGAGGGGCCCGTCC | + |
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Preference number: 5 (lower is better) Translates to: RTGEGSLSGGGGPRPVAPADVKT*TLRGPS Trigger: GGACGGGCCCCTCAACGTCAACGTCTTCACGTCGGC...AGGTGCTACTGGGCGTGGACCGCCACCCCCTGAGAGGCTCCCTTCCCCAGTCCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000270824.1 |
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| CDS TCA 90 bp | TCTCGGGGTTGGCGCGGATGTGCGCGTAGGCAGCCAGGCTGTTGCTaGGCAACTCCATGTCCCTTCGCGGGGCATCCATGCTGCTCTGGG | + |
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Preference number: 5 (lower is better) Translates to: SRGWRGCARRQPGCC*ATPCPFAGHPCCSG Trigger: CCCAGAGCAGCATGGATGCCCCGCGAAGGGACATGGAGTTGCTCAGCAACAGCCTGGCTGCCTACGCGCACATCCGCGCCAACCCCGAGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000270824.1 ENST00000490466.2 |
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| CDS-3UTR CAA 90 bp | GACTGGGGAAGGGAGCCTCTCAGGGGGTGGCGGTCCACGCCCAGTAGCACCTGGCAAAACCGTCAGGATTaGAATCTGCTGCTCTCTGAT | + |
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Preference number: 5 (lower is better) Translates to: DWGREPLRGWRSTPSSTWQNRQD*NLLLSD Trigger: ATCAGAGAGCAGCAGATTCAAATCCTGACGGTTTTG...CCAGGTGCTACTGGGCGTGGACCGCCACCCCCTGAGAGGCTCCCTTCCCCAGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000270824.1 |
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| CDS-3UTR CAA 90 bp | TCTGGCAGGACTGGGGAAGGGAGCCTCTCAGGGGGTGGCGGTCCACGCCCAGTAGCAGCTTTCTTTCATTaGGTCACTTCACCTCTTCAT | + |
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Preference number: 5 (lower is better) Translates to: SGRTGEGSLSGGGGPRPVAAFFH*VTSPLH Trigger: ATGAAGAGGTGAAGTGACCAAATGAAAGAAAGCTGC...TACTGGGCGTGGACCGCCACCCCCTGAGAGGCTCCCTTCCCCAGTCCTGCCAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000270824.1 |
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| CDS-3UTR CAA 90 bp | CATTTGGTCACTTCACCTCTTCATCGACCCCAGAGAGGGAGTGGGGACCCTGCACTTGGAGAGATTGAATaGACTTTACCAAAACCGTCA | + |
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Preference number: 5 (lower is better) Translates to: HLVTSPLHRPQRGSGDPALGEIE*TLPKPS Trigger: TGACGGTTTTGGTAAAGTCAATTCAATCTCTCCAAG...TGCAGGGTCCCCACTCCCTCTCTGGGGTCGATGAAGAGGTGAAGTGACCAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000270824.1 |
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| CDS GCA 72 bp | TGCCCGTGGCCGTGGGGCTGGGCCCCAGCGTGCCTGTaGCCAGCAGGTCCGGCTGCCCGGTGCGCCAGATCT | + |
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Preference number: 6 (lower is better) Translates to: CPWPWGWAPACL*PAGPAARCARS Trigger: AGATCTGGCGCACCGGGCAGCCGGACCTGCTGGGCACAGGCACGCTGGGGCCCAGCCCCACGGCCACGGGCA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000270824.1 ENST00000490466.2 |
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| CDS GCA 72 bp | CGTGAAGACGTTGACGTTGAGGGGCCCGTCCGGCTCTaGGGACAGCTCGGGGCCCGGCAGCGTGTCGTCGGG | + |
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Preference number: 6 (lower is better) Translates to: REDVDVEGPVRL*GQLGARQRVVG Trigger: CCCGACGACACGCTGCCGGGCCCCGAGCTGTCCGCAGAGCCGGACGGGCCCCTCAACGTCAACGTCTTCACG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000270824.1 ENST00000490466.2 |
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| CDS GCA 72 bp | CCAGCGTGCCTGTGCCCAGCAGGTCCGGCTGCCCGGTaGGCCAGATCTCCCGCAGGATCCGTTCGCGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: PACLCPAGPAAR*ARSPAGSVRAP Trigger: AGGAGCGCGAACGGATCCTGCGGGAGATCTGGCGCACCGGGCAGCCGGACCTGCTGGGCACAGGCACGCTGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000270824.1 ENST00000490466.2 |
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| CDS GCA 72 bp | TTGCAGCGGGAGCCGGGGCCCATCAGTAATAGTGCATaGGGCCCAGGGTGCCCGTGGCCGTGGGGCTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: LQREPGPISNSA*GPGCPWPWGWA Trigger: GGCCCAGCCCCACGGCCACGGGCACCCTGGGCCGCATGCACTATTACTGATGGGCCCCGGCTCCCGCTGCAA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000270824.1 ENST00000490466.2 |
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| CDS TCA 72 bp | TGGCGCGGATGTGCGCGTAGGCAGCCAGGCTGTTGCTaGGCAACTCCATGTCCCTTCGCGGGGCATCCATGC | + |
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Preference number: 6 (lower is better) Translates to: WRGCARRQPGCC*ATPCPFAGHPC Trigger: GCATGGATGCCCCGCGAAGGGACATGGAGTTGCTCAGCAACAGCCTGGCTGCCTACGCGCACATCCGCGCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000270824.1 ENST00000490466.2 |
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| CDS GCA 72 bp | CTGAGCTCATGTGCAGGTCCGGTACCCCGAGCGCCTTaGAGCGGGAGCCGGGGCCCATCAGTAATAGTGCAT | + |
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Preference number: 6 (lower is better) Translates to: LSSCAGPVPRAP*SGSRGPSVIVH Trigger: ATGCACTATTACTGATGGGCCCCGGCTCCCGCTGCAAGGCGCTCGGGGTACCGGACCTGCACATGAGCTCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000270824.1 ENST00000490466.2 |
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