RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ETV6 (Homo sapiens)

Ensembl gene IDs: ENSG00000139083

Ensembl transcript IDs: ENST00000396373.9, ENST00000541426.1, ENST00000544715.1, ENST00000545027.1

Found 396 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGAGTCCCAGGCTCATGCCCTCCGCCAGAATTCCAGCCCCGCCTGTaGTGGGTAGTTTGTCTAAGGTGCTCCAGGGTCCCTCTTGGTCTG +
Preference number: 1 (lower is better)
Translates to: GVPGSCPPPEFQPRL*WVVCLRCSRVPLGL
Trigger: CAGACCAAGAGGGACCCTGGAGCACCTTAGACAAACTACCCAGCACAGGCGGGGCTGGAATTCTGGCGGAGGGCATGAGCCTGGGACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR CCA 90 bp GTCCCAGGCTCATGCCCTCCGCCAGAATTCCAGCCCCGCCTGTGCTaGGTAGTTTGTCTAAGGTGCTCCAGGGTCCCTCTTGGTCTGCAA +
Preference number: 1 (lower is better)
Translates to: VPGSCPPPEFQPRLC*VVCLRCSRVPLGLQ
Trigger: TTGCAGACCAAGAGGGACCCTGGAGCACCTTAGACAAACTACCCAGCACAGGCGGGGCTGGAATTCTGGCGGAGGGCATGAGCCTGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR CCA 90 bp CCACTCGCCTCATATAGAAGGTCCCTGACCTCCCGGAAGGTTGAATaGTGGGGCGCCTGTGACAGTAGGAGTGGGCTGGCTATGCCCGTG +
Preference number: 1 (lower is better)
Translates to: PLASYRRSLTSRKVE*WGACDSRSGLAMPV
Trigger: CACGGGCATAGCCAGCCCACTCCTACTGTCACAGGCGCCCCACCATTCAACCTTCCGGGAGGTCAGGGACCTTCTATATGAGGCGAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR CCA 90 bp CCCGGAAGGTTGAATGGTGGGGCGCCTGTGACAGTAGGAGTGGGCTaGCTATGCCCGTGTGTCTACCTGTGCTCTGATAAGAGGCAGGGA +
Preference number: 1 (lower is better)
Translates to: PGRLNGGAPVTVGVG*LCPCVYLCSDKRQG
Trigger: TCCCTGCCTCTTATCAGAGCACAGGTAGACACACGGGCATAGCCAGCCCACTCCTACTGTCACAGGCGCCCCACCATTCAACCTTCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR CCA 90 bp CTCGCCTCATATAGAAGGTCCCTGACCTCCCGGAAGGTTGAATGGTaGGGCGCCTGTGACAGTAGGAGTGGGCTGGCTATGCCCGTGTGT +
Preference number: 1 (lower is better)
Translates to: LASYRRSLTSRKVEW*GACDSRSGLAMPVC
Trigger: ACACACGGGCATAGCCAGCCCACTCCTACTGTCACAGGCGCCCCACCATTCAACCTTCCGGGAGGTCAGGGACCTTCTATATGAGGCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR GCA 90 bp CCGCCAGAATTCCAGCCCCGCCTGTGCTGGGTAGTTTGTCTAAGGTaGTCCAGGGTCCCTCTTGGTCTGCAAGAGAAGTGTCCCTGCCAT +
Preference number: 1 (lower is better)
Translates to: PPEFQPRLCWVVCLR*SRVPLGLQEKCPCH
Trigger: ATGGCAGGGACACTTCTCTTGCAGACCAAGAGGGACCCTGGAGCACCTTAGACAAACTACCCAGCACAGGCGGGGCTGGAATTCTGGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR GCA 90 bp AGGTTGAATGGTGGGGCGCCTGTGACAGTAGGAGTGGGCTGGCTATaGCCGTGTGTCTACCTGTGCTCTGATAAGAGGCAGGGACAGAGC +
Preference number: 1 (lower is better)
Translates to: RLNGGAPVTVGVGWL*PCVYLCSDKRQGQS
Trigger: GCTCTGTCCCTGCCTCTTATCAGAGCACAGGTAGACACACGGGCATAGCCAGCCCACTCCTACTGTCACAGGCGCCCCACCATTCAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR CCA 90 bp TCTGCCCAGGCTGGGCACACACTGATTGCAACTGAGACTGCCCTCTaGGATCCTCCGTCTCCAAAGCTCTGTGTCCAGTGGAGACCAGGA +
Preference number: 1 (lower is better)
Translates to: SAQAGHTLIATETAL*DPPSPKLCVQWRPG
Trigger: TCCTGGTCTCCACTGGACACAGAGCTTTGGAGACGGAGGATCCCAGAGGGCAGTCTCAGTTGCAATCAGTGTGTGCCCAGCCTGGGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR GCA 90 bp CTAAGGTGCTCCAGGGTCCCTCTTGGTCTGCAAGAGAAGTGTCCCTaGCATTTCTGGGTCGCTTCCTTTTCCACTCTCCTCAGCCCGCCT +
Preference number: 1 (lower is better)
Translates to: LRCSRVPLGLQEKCP*HFWVASFSTLLSPP
Trigger: AGGCGGGCTGAGGAGAGTGGAAAAGGAAGCGACCCAGAAATGGCAGGGACACTTCTCTTGCAGACCAAGAGGGACCCTGGAGCACCTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR CCA 90 bp GCATCTGTGATGATTTTGGCCTCCCTCAGATGGGTGGCCCAATGCTaGGATGCGGGTTTGATTCTGTGCTGCTGGCCACAAAGCACCCGG +
Preference number: 1 (lower is better)
Translates to: ASVMILASLRWVAQC*DAGLILCCWPQSTR
Trigger: CCGGGTGCTTTGTGGCCAGCAGCACAGAATCAAACCCGCATCCCAGCATTGGGCCACCCATCTGAGGGAGGCCAAAATCATCACAGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR TCA 90 bp CCATTCAAGCAGACTGAGACCCACTCGCCTCATATAGAAGGTCCCTaGCCTCCCGGAAGGTTGAATGGTGGGGCGCCTGTGACAGTAGGA +
Preference number: 1 (lower is better)
Translates to: PFKQTETHSPHIEGP*PPGRLNGGAPVTVG
Trigger: TCCTACTGTCACAGGCGCCCCACCATTCAACCTTCCGGGAGGTCAGGGACCTTCTATATGAGGCGAGTGGGTCTCAGTCTGCTTGAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR GCA 90 bp GCAGCATCTGTGATGATTTTGGCCTCCCTCAGATGGGTGGCCCAATaGTGGGATGCGGGTTTGATTCTGTGCTGCTGGCCACAAAGCACC +
Preference number: 1 (lower is better)
Translates to: AASVMILASLRWVAQ*WDAGLILCCWPQST
Trigger: GGTGCTTTGTGGCCAGCAGCACAGAATCAAACCCGCATCCCAGCATTGGGCCACCCATCTGAGGGAGGCCAAAATCATCACAGATGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR CCA 90 bp CCGCCTGTGCTGGGTAGTTTGTCTAAGGTGCTCCAGGGTCCCTCTTaGTCTGCAAGAGAAGTGTCCCTGCCATTTCTGGGTCGCTTCCTT +
Preference number: 1 (lower is better)
Translates to: PPVLGSLSKVLQGPS*SAREVSLPFLGRFL
Trigger: AAGGAAGCGACCCAGAAATGGCAGGGACACTTCTCTTGCAGACCAAGAGGGACCCTGGAGCACCTTAGACAAACTACCCAGCACAGGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR CCA 90 bp GTCTGCAGCACAGCAGCATCTGTGATGATTTTGGCCTCCCTCAGATaGGTGGCCCAATGCTGGGATGCGGGTTTGATTCTGTGCTGCTGG +
Preference number: 1 (lower is better)
Translates to: VCSTAASVMILASLR*VAQCWDAGLILCCW
Trigger: CCAGCAGCACAGAATCAAACCCGCATCCCAGCATTGGGCCACCCATCTGAGGGAGGCCAAAATCATCACAGATGCTGCTGTGCTGCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR TCA 90 bp TGCGGGTTTGATTCTGTGCTGCTGGCCACAAAGCACCCGGGTCACTaGTTCTGTTTAGGTGCCAACAATCCCCAAGACTCTCCAAGAGGC +
Preference number: 1 (lower is better)
Translates to: CGFDSVLLATKHPGH*FCLGANNPQDSPRG
Trigger: GCCTCTTGGAGAGTCTTGGGGATTGTTGGCACCTAAACAGAATCAGTGACCCGGGTGCTTTGTGGCCAGCAGCACAGAATCAAACCCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR TCA 90 bp CAGCGTGCTGAGATCCAGCAGAATCTCATCACCATTCAAGCAGACTaGGACCCACTCGCCTCATATAGAAGGTCCCTGACCTCCCGGAAG +
Preference number: 1 (lower is better)
Translates to: QRAEIQQNLITIQAD*DPLASYRRSLTSRK
Trigger: CTTCCGGGAGGTCAGGGACCTTCTATATGAGGCGAGTGGGTCTCAGTCTGCTTGAATGGTGATGAGATTCTGCTGGATCTCAGCACGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR GCA 90 bp TGTGCTGCTGGCCACAAAGCACCCGGGTCACTGATTCTGTTTAGGTaGCAACAATCCCCAAGACTCTCCAAGAGGCTGAACTCTGTCAGA +
Preference number: 1 (lower is better)
Translates to: CAAGHKAPGSLILFR*QQSPRLSKRLNSVR
Trigger: TCTGACAGAGTTCAGCCTCTTGGAGAGTCTTGGGGATTGTTGGCACCTAAACAGAATCAGTGACCCGGGTGCTTTGTGGCCAGCAGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR GCA 90 bp CTGCTGGGCCTGTGTGGTCTTTTCATATTTTCCACTTTGCAGCGCTaGGCTCCCAAGCTAATCCCAAGCTGCCGAGGCCTTCCAAATAAC +
Preference number: 1 (lower is better)
Translates to: LLGLCGLFIFSTLQR*APKLIPSCRGLPNN
Trigger: GTTATTTGGAAGGCCTCGGCAGCTTGGGATTAGCTTGGGAGCGCAGCGCTGCAAAGTGGAAAATATGAAAAGACCACACAGGCCCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR CCA 90 bp AGGAATTACAGATGGAGAGATTCCAAATCAGAAGGAAACGTGACATaGAGTCCCAGGCTCATGCCCTCCGCCAGAATTCCAGCCCCGCCT +
Preference number: 1 (lower is better)
Translates to: RNYRWRDSKSEGNVT*SPRLMPSARIPAPP
Trigger: AGGCGGGGCTGGAATTCTGGCGGAGGGCATGAGCCTGGGACTCCATGTCACGTTTCCTTCTGATTTGGAATCTCTCCATCTGTAATTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR CCA 90 bp CTGTGTGACCCAAACTCTACATGTCTGACTCAACTCAGAAAAAGCTaGGGAGAAGCCCAGGGGTCTGGTAACTTCACCTGGGAGCTGCTG +
Preference number: 1 (lower is better)
Translates to: LCDPNSTCLTQLRKS*GEAQGSGNFTWELL
Trigger: CAGCAGCTCCCAGGTGAAGTTACCAGACCCCTGGGCTTCTCCCCAGCTTTTTCTGAGTTGAGTCAGACATGTAGAGTTTGGGTCACACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR TCA 90 bp GTAACAGGAACAGACCTGATCCACGTGGCAGGAAAAAGAGGAACCTaGACCCCTCTGCAAGTATTCTCTTTCCTGACCAGCTGGGCTTGC +
Preference number: 1 (lower is better)
Translates to: VTGTDLIHVAGKRGT*TPLQVFSFLTSWAC
Trigger: GCAAGCCCAGCTGGTCAGGAAAGAGAATACTTGCAGAGGGGTTCAGGTTCCTCTTTTTCCTGCCACGTGGATCAGGTCTGTTCCTGTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR TCA 90 bp TCACCATGTCCTACTGAATGCTCTCAAAAGACACCTGCAGCGTGCTaGGATCCAGCAGAATCTCATCACCATTCAAGCAGACTGAGACCC +
Preference number: 1 (lower is better)
Translates to: SPCPTECSQKTPAAC*DPAESHHHSSRLRP
Trigger: GGGTCTCAGTCTGCTTGAATGGTGATGAGATTCTGCTGGATCTCAGCACGCTGCAGGTGTCTTTTGAGAGCATTCAGTAGGACATGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR GCA 90 bp ATATTTTCCACTTTGCAGCGCTGCGCTCCCAAGCTAATCCCAAGCTaGCGAGGCCTTCCAAATAACTTGGACAGCCTTCCATCCTTATCT +
Preference number: 1 (lower is better)
Translates to: IFSTLQRCAPKLIPS*RGLPNNLDSLPSLS
Trigger: AGATAAGGATGGAAGGCTGTCCAAGTTATTTGGAAGGCCTCGGCAGCTTGGGATTAGCTTGGGAGCGCAGCGCTGCAAAGTGGAAAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR CCA 90 bp AATAACTTGGACAGCCTTCCATCCTTATCTTACGCCTTAGACACATaGTTCTCACAGCCATCTCAGGGGCGGCTCTCTGGACTAGCATGT +
Preference number: 1 (lower is better)
Translates to: NNLDSLPSLSYALDT*FSQPSQGRLSGLAC
Trigger: ACATGCTAGTCCAGAGAGCCGCCCCTGAGATGGCTGTGAGAACCATGTGTCTAAGGCGTAAGATAAGGATGGAAGGCTGTCCAAGTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR TCA 90 bp ATACCAGTCATCTTAGAGGCTGAAATAGGGATCACCATGTCCTACTaGATGCTCTCAAAAGACACCTGCAGCGTGCTGAGATCCAGCAGA +
Preference number: 1 (lower is better)
Translates to: IPVILEAEIGITMSY*MLSKDTCSVLRSSR
Trigger: TCTGCTGGATCTCAGCACGCTGCAGGTGTCTTTTGAGAGCATTCAGTAGGACATGGTGATCCCTATTTCAGCCTCTAAGATGACTGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR TCA 90 bp GAAATGAGTCACGCCGGGTGGATTAGGCAGGTACAATATAAACTCTaGAAGCAGGGATTATGGCTGATTGAGCTTTGGGTCCCTCAGTGT +
Preference number: 1 (lower is better)
Translates to: EMSHAGWIRQVQYKL*KQGLWLIELWVPQC
Trigger: ACACTGAGGGACCCAAAGCTCAATCAGCCATAATCCCTGCTTTCAGAGTTTATATTGTACCTGCCTAATCCACCCGGCGTGACTCATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR GCA 90 bp CCTAGGTTGGTGTCCTTGTCAGTAAGGCCGAGGGAAAATTCCTCTTaGCTGTGTGACCCAAACTCTACATGTCTGACTCAACTCAGAAAA +
Preference number: 1 (lower is better)
Translates to: PRLVSLSVRPRENSS*LCDPNSTCLTQLRK
Trigger: TTTTCTGAGTTGAGTCAGACATGTAGAGTTTGGGTCACACAGGCAAGAGGAATTTTCCCTCGGCCTTACTGACAAGGACACCAACCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR CCA 90 bp TACTTCTGGGGAACTTCTTTAGCATTTCTTCATATAAACGGTCTGTaGCAACTGGGAAGAACAGTGGAGATACGGGTGCTGGGGCTTTAT +
Preference number: 1 (lower is better)
Translates to: YFWGTSLAFLHINGL*QLGRTVEIRVLGLY
Trigger: ATAAAGCCCCAGCACCCGTATCTCCACTGTTCTTCCCAGTTGCCACAGACCGTTTATATGAAGAAATGCTAAAGAAGTTCCCCAGAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545027.1
3UTR TCA 90 bp TGCGGTCACAAAGAGAAATCATCAAGAATGTTCACTTGGCATGTGTaGAAGATTCAGGGGGTCTGCAGCTGTTTAGTGTTGATGCAGTTG +
Preference number: 1 (lower is better)
Translates to: CGHKEKSSRMFTWHV*KIQGVCSCLVLMQL
Trigger: CAACTGCATCAACACTAAACAGCTGCAGACCCCCTGAATCTTTCACACATGCCAAGTGAACATTCTTGATGATTTCTCTTTGTGACCGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR TCA 90 bp GTATCCAGGTGCTGGCACTACCCGGGTTTTCTCATAAAGAACAAATaGAGAGGACATTTGCAGTTAGGGGAATTACGAAATCCTTATTGG +
Preference number: 1 (lower is better)
Translates to: VSRCWHYPGFLIKNK*RGHLQLGELRNPYW
Trigger: CCAATAAGGATTTCGTAATTCCCCTAACTGCAAATGTCCTCTTCATTTGTTCTTTATGAGAAAACCCGGGTAGTGCCAGCACCTGGATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR CCA 90 bp CAAAAATGTATTCAGACTTGGAGCCTAGGCAGTGAAAGGTGGGAATaGTGGTTACTTCATCATTTCGGTAAATTGTCACAGCCATTTGAA +
Preference number: 1 (lower is better)
Translates to: QKCIQTWSLGSERWE*WLLHHFGKLSQPFE
Trigger: TTCAAATGGCTGTGACAATTTACCGAAATGATGAAGTAACCACCATTCCCACCTTTCACTGCCTAGGCTCCAAGTCTGAATACATTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR CCA 90 bp AAATGTATTCAGACTTGGAGCCTAGGCAGTGAAAGGTGGGAATGGTaGTTACTTCATCATTTCGGTAAATTGTCACAGCCATTTGAATTT +
Preference number: 1 (lower is better)
Translates to: KCIQTWSLGSERWEW*LLHHFGKLSQPFEF
Trigger: AAATTCAAATGGCTGTGACAATTTACCGAAATGATGAAGTAACCACCATTCCCACCTTTCACTGCCTAGGCTCCAAGTCTGAATACATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR CCA 90 bp CTCTCCATTCTTAAAATCAGTGGCTTTCACAATACATCAGGTATTTaGCTTAATCTCTGCATTTCAGATAGAATACCAGTCATCTTAGAG +
Preference number: 1 (lower is better)
Translates to: LSILKISGFHNTSGI*LNLCISDRIPVILE
Trigger: CTCTAAGATGACTGGTATTCTATCTGAAATGCAGAGATTAAGCCAAATACCTGATGTATTGTGAAAGCCACTGATTTTAAGAATGGAGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR-3UTR GCA 90 bp ATCTTACGCCTTAGACACATGGTTCTCACAGCCATCTCAGGGGCGGCTCTCTGGAGGGGTTCCCTGGGCTaGTGGCCCGCTGAGGTGGAC +
Preference number: 2 (lower is better)
Translates to: ILRLRHMVLTAISGAALWRGSLG*WPAEVD
Trigger: GTCCACCTCAGCGGGCCAGCAGCCCAGGGAACCCCT...CCAGAGAGCCGCCCCTGAGATGGCTGTGAGAACCATGTGTCTAAGGCGTAAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR-3UTR CCA 90 bp AGGTTGAATGGTGGGGCGCCTGTGACAGTAGGAGTGGGCTGGCTATGCCCGTGTTTCCAGCAATCCTGGTaGGCAGGGGTTCCCTGGGCT +
Preference number: 2 (lower is better)
Translates to: RLNGGAPVTVGVGWLCPCFQQSW*AGVPWA
Trigger: AGCCCAGGGAACCCCTGCCCACCAGGATTGCTGGAA...ACACGGGCATAGCCAGCCCACTCCTACTGTCACAGGCGCCCCACCATTCAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR-3UTR TCA 90 bp TCCCGGAGGAGCTGTGAGTTTCTCCCCCAACTGAGTAGAGGAAACAGAGGGGAAGGGCTGCTGGCCCGCTaGGGTGGACTGTTGGTTCCT +
Preference number: 2 (lower is better)
Translates to: SRRSCEFLPQLSRGNRGEGLLAR*GGLLVP
Trigger: AGGAACCAACAGTCCACCTCAGCGGGCCAGCAGCCC...TTCCCCTCTGTTTCCTCTACTCAGTTGGGGGAGAAACTCACAGCTCCTCCGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR-3UTR CCA 90 bp AGGTTGAATGGTGGGGCGCCTGTGACAGTAGGAGTGGGCTGGCTATGCCCGTGTCCTGTCTGCCCAGGCTaGGCACACACTGATTGCAAC +
Preference number: 2 (lower is better)
Translates to: RLNGGAPVTVGVGWLCPCPVCPG*AHTDCN
Trigger: GTTGCAATCAGTGTGTGCCCAGCCTGGGCAGACAGG...ACACGGGCATAGCCAGCCCACTCCTACTGTCACAGGCGCCCCACCATTCAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR CAA 90 bp CTCATGCCCTCCGCCAGAATTCCAGCCCCGCCTGTGCTGGGTAGTTaGTCTAAGGTGCTCCAGGGTCCCTCTTGGTCTGCAAGAGAAGTG +
Preference number: 2 (lower is better)
Translates to: LMPSARIPAPPVLGS*SKVLQGPSWSAREV
Trigger: CACTTCTCTTGCAGACCAAGAGGGACCCTGGAGCACCTTAGACAAACTACCCAGCACAGGCGGGGCTGGAATTCTGGCGGAGGGCATGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR-3UTR GCA 90 bp AGGAAACGTGACATGGAGTCCCAGGCTCATGCCCTCCGCCAGAATTCCAGCCCCCAAGAGAAGTGTCCCTaGCATTTCTGGGTCGCTTCC +
Preference number: 2 (lower is better)
Translates to: RKRDMESQAHALRQNSSPQEKCP*HFWVAS
Trigger: GGAAGCGACCCAGAAATGGCAGGGACACTTCTCTTG...GGGGCTGGAATTCTGGCGGAGGGCATGAGCCTGGGACTCCATGTCACGTTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR-3UTR GCA 90 bp ATCTTACGCCTTAGACACATGGTTCTCACAGCCATCTCAGGGGCGGCTCTCTGGGGGTCCCTCTTGGTCTaGAAGAGAAGTGTCCCTGCC +
Preference number: 2 (lower is better)
Translates to: ILRLRHMVLTAISGAALWGSLLV*KRSVPA
Trigger: GGCAGGGACACTTCTCTTGCAGACCAAGAGGGACCC...CCAGAGAGCCGCCCCTGAGATGGCTGTGAGAACCATGTGTCTAAGGCGTAAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR-3UTR CCA 90 bp TTCAGCCAAGACCCAACAGTAACAGGAACAGACCTGATCCACGTGGCAGGAAAAGGTTCCCTGGGCTGCTaGCCCGCTGAGGTGGACTGT +
Preference number: 2 (lower is better)
Translates to: FSQDPTVTGTDLIHVAGKGSLGC*PAEVDC
Trigger: ACAGTCCACCTCAGCGGGCCAGCAGCCCAGGGAACC...TTTTCCTGCCACGTGGATCAGGTCTGTTCCTGTTACTGTTGGGTCTTGGCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR-3UTR CCA 90 bp ATCTTACGCCTTAGACACATGGTTCTCACAGCCATCTCAGGGGCGGCTCTCTGGTTGGCCTCCCTCAGATaGGTGGCCCAATGCTGGGAT +
Preference number: 2 (lower is better)
Translates to: ILRLRHMVLTAISGAALWLASLR*VAQCWD
Trigger: ATCCCAGCATTGGGCCACCCATCTGAGGGAGGCCAA...CCAGAGAGCCGCCCCTGAGATGGCTGTGAGAACCATGTGTCTAAGGCGTAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR-3UTR GCA 90 bp TCCCGGAGGAGCTGTGAGTTTCTCCCCCAACTGAGTAGAGGAAACAGAGGGGAAGGCCCAATGCTGGGATaGGGGTTTGATTCTGTGCTG +
Preference number: 2 (lower is better)
Translates to: SRRSCEFLPQLSRGNRGEGPMLG*GFDSVL
Trigger: CAGCACAGAATCAAACCCGCATCCCAGCATTGGGCC...TTCCCCTCTGTTTCCTCTACTCAGTTGGGGGAGAAACTCACAGCTCCTCCGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR-3UTR CCA 90 bp ATCTTACGCCTTAGACACATGGTTCTCACAGCCATCTCAGGGGCGGCTCTCTGGCTCCAGGGTCCCTCTTaGTCTGCAAGAGAAGTGTCC +
Preference number: 2 (lower is better)
Translates to: ILRLRHMVLTAISGAALWLQGPS*SAREVS
Trigger: GGACACTTCTCTTGCAGACCAAGAGGGACCCTGGAG...CCAGAGAGCCGCCCCTGAGATGGCTGTGAGAACCATGTGTCTAAGGCGTAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR-3UTR CCA 90 bp TTACGCCTTAGACACATGGTTCTCACAGCCATCTCAGGGGCGGCTCTCTGGACTTGGGTGGCCCAATGCTaGGATGCGGGTTTGATTCTG +
Preference number: 2 (lower is better)
Translates to: LRLRHMVLTAISGAALWTWVAQC*DAGLIL
Trigger: CAGAATCAAACCCGCATCCCAGCATTGGGCCACCCA...AGTCCAGAGAGCCGCCCCTGAGATGGCTGTGAGAACCATGTGTCTAAGGCGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR CAA 90 bp GTTTCTGGACTGCTGGGCCTGTGTGGTCTTTTCATATTTTCCACTTaGCAGCGCTGCGCTCCCAAGCTAATCCCAAGCTGCCGAGGCCTT +
Preference number: 2 (lower is better)
Translates to: VSGLLGLCGLFIFST*QRCAPKLIPSCRGL
Trigger: AAGGCCTCGGCAGCTTGGGATTAGCTTGGGAGCGCAGCGCTGCAAAGTGGAAAATATGAAAAGACCACACAGGCCCAGCAGTCCAGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR-3UTR GCA 90 bp ATCTTACGCCTTAGACACATGGTTCTCACAGCCATCTCAGGGGCGGCTCTCTGGGTAGTTTGTCTAAGGTaGTCCAGGGTCCCTCTTGGT +
Preference number: 2 (lower is better)
Translates to: ILRLRHMVLTAISGAALWVVCLR*SRVPLG
Trigger: ACCAAGAGGGACCCTGGAGCACCTTAGACAAACTAC...CCAGAGAGCCGCCCCTGAGATGGCTGTGAGAACCATGTGTCTAAGGCGTAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR-3UTR CCA 90 bp TTACGCCTTAGACACATGGTTCTCACAGCCATCTCAGGGGCGGCTCTCTGGACTTGTCCCTGCCATTTCTaGGTCGCTTCCTTTTCCACT +
Preference number: 2 (lower is better)
Translates to: LRLRHMVLTAISGAALWTCPCHF*VASFST
Trigger: AGTGGAAAAGGAAGCGACCCAGAAATGGCAGGGACA...AGTCCAGAGAGCCGCCCCTGAGATGGCTGTGAGAACCATGTGTCTAAGGCGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR-3UTR CCA 90 bp GTCACGCCGGGTGGATTAGGCAGGTACAATATAAACTCTGAAAGCAGGGATTATCCTCCCTCAGATGGGTaGCCCAATGCTGGGATGCGG +
Preference number: 2 (lower is better)
Translates to: VTPGGLGRYNINSESRDYPPSDG*PNAGMR
Trigger: CCGCATCCCAGCATTGGGCCACCCATCTGAGGGAGG...ATAATCCCTGCTTTCAGAGTTTATATTGTACCTGCCTAATCCACCCGGCGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR CAA 90 bp TGCGCTCCCAAGCTAATCCCAAGCTGCCGAGGCCTTCCAAATAACTaGGACAGCCTTCCATCCTTATCTTACGCCTTAGACACATGGTTC +
Preference number: 2 (lower is better)
Translates to: CAPKLIPSCRGLPNN*DSLPSLSYALDTWF
Trigger: GAACCATGTGTCTAAGGCGTAAGATAAGGATGGAAGGCTGTCCAAGTTATTTGGAAGGCCTCGGCAGCTTGGGATTAGCTTGGGAGCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR-3UTR TCA 90 bp GACTGCTGGGCCTGTGTGGTCTTTTCATATTTTCCACTTTGCAGCGCTGCGCTCGGAAAAAGAGGAACCTaGACCCCTCTGCAAGTATTC +
Preference number: 2 (lower is better)
Translates to: DCWACVVFSYFPLCSAALGKRGT*TPLQVF
Trigger: GAATACTTGCAGAGGGGTTCAGGTTCCTCTTTTTCC...GAGCGCAGCGCTGCAAAGTGGAAAATATGAAAAGACCACACAGGCCCAGCAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR-3UTR TCA 90 bp CATGTATCTGTCTGCAGCACAGCAGCATCTGTGATGATTTTGGCCTCCCTCAGAGACTCTCCAAGAGGCTaGACTCTGTCAGAAGGCATC +
Preference number: 2 (lower is better)
Translates to: HVSVCSTAASVMILASLRDSPRG*TLSEGI
Trigger: GATGCCTTCTGACAGAGTTCAGCCTCTTGGAGAGTC...TCTGAGGGAGGCCAAAATCATCACAGATGCTGCTGTGCTGCAGACAGATACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR-3UTR TCA 90 bp ATCTTACGCCTTAGACACATGGTTCTCACAGCCATCTCAGGGGCGGCTCTCTGGATGTCTTCCCCTAGATaGACGATGAAGAGTCAAACT +
Preference number: 2 (lower is better)
Translates to: ILRLRHMVLTAISGAALWMSSPR*TMKSQT
Trigger: AGTTTGACTCTTCATCGTTCATCTAGGGGAAGACAT...CCAGAGAGCCGCCCCTGAGATGGCTGTGAGAACCATGTGTCTAAGGCGTAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR-3UTR GCA 90 bp GTCACGCCGGGTGGATTAGGCAGGTACAATATAAACTCTGAAAGCAGGGATTATGCGGGTTTGATTCTGTaGTGCTGGCCACAAAGCACC +
Preference number: 2 (lower is better)
Translates to: VTPGGLGRYNINSESRDYAGLIL*CWPQST
Trigger: GGTGCTTTGTGGCCAGCAGCACAGAATCAAACCCGC...ATAATCCCTGCTTTCAGAGTTTATATTGTACCTGCCTAATCCACCCGGCGTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR-3UTR CCA 90 bp GTCACGCCGGGTGGATTAGGCAGGTACAATATAAACTCTGAAAGCAGGGATTATGAAGGAAACGTGACATaGAGTCCCAGGCTCATGCCC +
Preference number: 2 (lower is better)
Translates to: VTPGGLGRYNINSESRDYEGNVT*SPRLMP
Trigger: GGGCATGAGCCTGGGACTCCATGTCACGTTTCCTTC...ATAATCCCTGCTTTCAGAGTTTATATTGTACCTGCCTAATCCACCCGGCGTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR-3UTR TCA 90 bp GTCACGCCGGGTGGATTAGGCAGGTACAATATAAACTCTGAAAGCAGGGATTATACACCTGCAGCGTGCTaGGATCCAGCAGAATCTCAT +
Preference number: 2 (lower is better)
Translates to: VTPGGLGRYNINSESRDYTPAAC*DPAESH
Trigger: ATGAGATTCTGCTGGATCTCAGCACGCTGCAGGTGT...ATAATCCCTGCTTTCAGAGTTTATATTGTACCTGCCTAATCCACCCGGCGTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR-3UTR GCA 90 bp CGCCTTCTATTTCTTCTTCAAGTGGCTGAAGGTATCATCCTAAGTCTAACATATCATCTGAATCTCAACTaGAGGCAGGGCGGGAGGACA +
Preference number: 2 (lower is better)
Translates to: RLLFLLQVAEGIILSLTYHLNLN*RQGGRT
Trigger: TGTCCTCCCGCCCTGCCTGCAGTTGAGATTCAGATG...ATATGTTAGACTTAGGATGATACCTTCAGCCACTTGAAGAAGAAATAGAAGGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR-3UTR CCA 90 bp GCAGTTAGGGGAATTACGAAATCCTTATTGGTAGTACAGATTGATATCCCTTATCAGCCCCGCCTGTGCTaGGTAGTTTGTCTAAGGTGC +
Preference number: 2 (lower is better)
Translates to: AVRGITKSLLVVQIDIPYQPRLC*VVCLRC
Trigger: GCACCTTAGACAAACTACCCAGCACAGGCGGGGCTG...ATAAGGGATATCAATCTGTACTACCAATAAGGATTTCGTAATTCCCCTAACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR-3UTR GCA 90 bp GCAGTTAGGGGAATTACGAAATCCTTATTGGTAGTACAGATTGATATCCCTTATTTCCAGCCCCGCCTGTaGTGGGTAGTTTGTCTAAGG +
Preference number: 2 (lower is better)
Translates to: AVRGITKSLLVVQIDIPYFQPRL*WVVCLR
Trigger: CCTTAGACAAACTACCCAGCACAGGCGGGGCTGGAA...ATAAGGGATATCAATCTGTACTACCAATAAGGATTTCGTAATTCCCCTAACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR-3UTR TCA 90 bp CGCCTTCTATTTCTTCTTCAAGTGGCTGAAGGTATCATCCTAAGTCTAACATATCATATAGAAGGTCCCTaGCCTCCCGGAAGGTTGAAT +
Preference number: 2 (lower is better)
Translates to: RLLFLLQVAEGIILSLTYHIEGP*PPGRLN
Trigger: ATTCAACCTTCCGGGAGGTCAGGGACCTTCTATATG...ATATGTTAGACTTAGGATGATACCTTCAGCCACTTGAAGAAGAAATAGAAGGCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR-3UTR GCA 90 bp GCAGTTAGGGGAATTACGAAATCCTTATTGGTAGTACAGATTGATATCCCTTATCCGTGTGTCTACCTGTaGTCTGATAAGAGGCAGGGA +
Preference number: 2 (lower is better)
Translates to: AVRGITKSLLVVQIDIPYPCVYL*SDKRQG
Trigger: TCCCTGCCTCTTATCAGAGCACAGGTAGACACACGG...ATAAGGGATATCAATCTGTACTACCAATAAGGATTTCGTAATTCCCCTAACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR-3UTR CCA 90 bp GCAGTTAGGGGAATTACGAAATCCTTATTGGTAGTACAGATTGATATCCCTTATCCACAAGATGGCCTTTaGAATGGAGCAGAGAGGAGC +
Preference number: 2 (lower is better)
Translates to: AVRGITKSLLVVQIDIPYPQDGL*NGAERS
Trigger: GCTCCTCTCTGCTCCATTCCAAAGGCCATCTTGTGG...ATAAGGGATATCAATCTGTACTACCAATAAGGATTTCGTAATTCCCCTAACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR-3UTR TCA 90 bp GCAGTTAGGGGAATTACGAAATCCTTATTGGTAGTACAGATTGATATCCCTTATTTCCTCTTGCCTGTGTaGCCCAAACTCTACATGTCT +
Preference number: 2 (lower is better)
Translates to: AVRGITKSLLVVQIDIPYFLLPV*PKLYMS
Trigger: AGACATGTAGAGTTTGGGTCACACAGGCAAGAGGAA...ATAAGGGATATCAATCTGTACTACCAATAAGGATTTCGTAATTCCCCTAACTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR-3UTR TCA 90 bp CGCCTTCTATTTCTTCTTCAAGTGGCTGAAGGTATCATCCTAAGTCTAACATATCAATTCCAGTGTCCTTaGACCATAGTCCATCTGTTT +
Preference number: 2 (lower is better)
Translates to: RLLFLLQVAEGIILSLTYQFQCP*TIVHLF
Trigger: AAACAGATGGACTATGGTTCAAGGACACTGGAATTG...ATATGTTAGACTTAGGATGATACCTTCAGCCACTTGAAGAAGAAATAGAAGGCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR-3UTR GCA 90 bp GCAGTTAGGGGAATTACGAAATCCTTATTGGTAGTACAGATTGATATCCCTTATAGGGAAAATTCCTCTTaGCTGTGTGACCCAAACTCT +
Preference number: 2 (lower is better)
Translates to: AVRGITKSLLVVQIDIPYRENSS*LCDPNS
Trigger: AGAGTTTGGGTCACACAGGCAAGAGGAATTTTCCCT...ATAAGGGATATCAATCTGTACTACCAATAAGGATTTCGTAATTCCCCTAACTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR-3UTR CCA 90 bp CGCCTTCTATTTCTTCTTCAAGTGGCTGAAGGTATCATCCTAAGTCTAACATATAAAAAGAGCCACAAATaGGTCCTTTCTGAGACACAG +
Preference number: 2 (lower is better)
Translates to: RLLFLLQVAEGIILSLTYKKSHK*VLSETQ
Trigger: CTGTGTCTCAGAAAGGACCCATTTGTGGCTCTTTTT...ATATGTTAGACTTAGGATGATACCTTCAGCCACTTGAAGAAGAAATAGAAGGCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR CAA 90 bp CAAATGAAGAGGACATTTGCAGTTAGGGGAATTACGAAATCCTTATaGGTAGTACAGATTGATATCCCTTATCTGAAATGCTTGGGACCA +
Preference number: 2 (lower is better)
Translates to: QMKRTFAVRGITKSL*VVQIDIPYLKCLGP
Trigger: TGGTCCCAAGCATTTCAGATAAGGGATATCAATCTGTACTACCAATAAGGATTTCGTAATTCCCCTAACTGCAAATGTCCTCTTCATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR CAA 90 bp AAATTGTCACAGCCATTTGAATTTCAGCTAAAGCGACATTCTCATTaGGACAAGAGATCAGTATCAAAAGACATTGGATCAGAGGGTTCC +
Preference number: 2 (lower is better)
Translates to: KLSQPFEFQLKRHSH*DKRSVSKDIGSEGS
Trigger: GGAACCCTCTGATCCAATGTCTTTTGATACTGATCTCTTGTCCAAATGAGAATGTCGCTTTAGCTGAAATTCAAATGGCTGTGACAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR-3UTR TCA 90 bp GCAGTTAGGGGAATTACGAAATCCTTATTGGTAGTACAGATTGATATCCCTTATCAAATGGGTCCTTTCTaGGACACAGCTATGAAAGAA +
Preference number: 2 (lower is better)
Translates to: AVRGITKSLLVVQIDIPYQMGPF*DTAMKE
Trigger: TTCTTTCATAGCTGTGTCTCAGAAAGGACCCATTTG...ATAAGGGATATCAATCTGTACTACCAATAAGGATTTCGTAATTCCCCTAACTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR-3UTR CCA 90 bp GCAGTTAGGGGAATTACGAAATCCTTATTGGTAGTACAGATTGATATCCCTTATGCCTTCCAAATAACTTaGACAGCCTTCCATCCTTAT +
Preference number: 2 (lower is better)
Translates to: AVRGITKSLLVVQIDIPYAFQIT*TAFHPY
Trigger: ATAAGGATGGAAGGCTGTCCAAGTTATTTGGAAGGC...ATAAGGGATATCAATCTGTACTACCAATAAGGATTTCGTAATTCCCCTAACTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR GCA 72 bp GGCTCATGCCCTCCGCCAGAATTCCAGCCCCGCCTGTaGTGGGTAGTTTGTCTAAGGTGCTCCAGGGTCCCT +
Preference number: 3 (lower is better)
Translates to: GSCPPPEFQPRL*WVVCLRCSRVP
Trigger: AGGGACCCTGGAGCACCTTAGACAAACTACCCAGCACAGGCGGGGCTGGAATTCTGGCGGAGGGCATGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR GCA 72 bp GGTGGGGCGCCTGTGACAGTAGGAGTGGGCTGGCTATaGCCGTGTGTCTACCTGTGCTCTGATAAGAGGCAG +
Preference number: 3 (lower is better)
Translates to: GGAPVTVGVGWL*PCVYLCSDKRQ
Trigger: CTGCCTCTTATCAGAGCACAGGTAGACACACGGGCATAGCCAGCCCACTCCTACTGTCACAGGCGCCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR TCA 72 bp CAGACTGAGACCCACTCGCCTCATATAGAAGGTCCCTaGCCTCCCGGAAGGTTGAATGGTGGGGCGCCTGTG +
Preference number: 3 (lower is better)
Translates to: QTETHSPHIEGP*PPGRLNGGAPV
Trigger: CACAGGCGCCCCACCATTCAACCTTCCGGGAGGTCAGGGACCTTCTATATGAGGCGAGTGGGTCTCAGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR CCA 72 bp TCATGCCCTCCGCCAGAATTCCAGCCCCGCCTGTGCTaGGTAGTTTGTCTAAGGTGCTCCAGGGTCCCTCTT +
Preference number: 3 (lower is better)
Translates to: SCPPPEFQPRLC*VVCLRCSRVPL
Trigger: AAGAGGGACCCTGGAGCACCTTAGACAAACTACCCAGCACAGGCGGGGCTGGAATTCTGGCGGAGGGCATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR GCA 72 bp TGGGTGGCCCAATGCTGGGATGCGGGTTTGATTCTGTaGTGCTGGCCACAAAGCACCCGGGTCACTGATTCT +
Preference number: 3 (lower is better)
Translates to: WVAQCWDAGLIL*CWPQSTRVTDS
Trigger: AGAATCAGTGACCCGGGTGCTTTGTGGCCAGCAGCACAGAATCAAACCCGCATCCCAGCATTGGGCCACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR CCA 72 bp TATAGAAGGTCCCTGACCTCCCGGAAGGTTGAATGGTaGGGCGCCTGTGACAGTAGGAGTGGGCTGGCTATG +
Preference number: 3 (lower is better)
Translates to: YRRSLTSRKVEW*GACDSRSGLAM
Trigger: CATAGCCAGCCCACTCCTACTGTCACAGGCGCCCCACCATTCAACCTTCCGGGAGGTCAGGGACCTTCTATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR CCA 72 bp TCATATAGAAGGTCCCTGACCTCCCGGAAGGTTGAATaGTGGGGCGCCTGTGACAGTAGGAGTGGGCTGGCT +
Preference number: 3 (lower is better)
Translates to: SYRRSLTSRKVE*WGACDSRSGLA
Trigger: AGCCAGCCCACTCCTACTGTCACAGGCGCCCCACCATTCAACCTTCCGGGAGGTCAGGGACCTTCTATATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR GCA 72 bp GTGGCCCAATGCTGGGATGCGGGTTTGATTCTGTGCTaGTGGCCACAAAGCACCCGGGTCACTGATTCTGTT +
Preference number: 3 (lower is better)
Translates to: VAQCWDAGLILC*WPQSTRVTDSV
Trigger: AACAGAATCAGTGACCCGGGTGCTTTGTGGCCAGCAGCACAGAATCAAACCCGCATCCCAGCATTGGGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR GCA 72 bp GTAGGAGTGGGCTGGCTATGCCCGTGTGTCTACCTGTaGTCTGATAAGAGGCAGGGACAGAGCAAGGCTGAA +
Preference number: 3 (lower is better)
Translates to: VGVGWLCPCVYL*SDKRQGQSKAE
Trigger: TTCAGCCTTGCTCTGTCCCTGCCTCTTATCAGAGCACAGGTAGACACACGGGCATAGCCAGCCCACTCCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR CCA 72 bp TTGAATGGTGGGGCGCCTGTGACAGTAGGAGTGGGCTaGCTATGCCCGTGTGTCTACCTGTGCTCTGATAAG +
Preference number: 3 (lower is better)
Translates to: LNGGAPVTVGVG*LCPCVYLCSDK
Trigger: CTTATCAGAGCACAGGTAGACACACGGGCATAGCCAGCCCACTCCTACTGTCACAGGCGCCCCACCATTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR-3UTR CAA 90 bp AGGTTGAATGGTGGGGCGCCTGTGACAGTAGGAGTGGGCTGGCTATGCCCGTGTGGCCTTCCAAATAACTaGGACAGCCTTCCATCCTTA +
Preference number: 3 (lower is better)
Translates to: RLNGGAPVTVGVGWLCPCGLPNN*DSLPSL
Trigger: TAAGGATGGAAGGCTGTCCAAGTTATTTGGAAGGCC...ACACGGGCATAGCCAGCCCACTCCTACTGTCACAGGCGCCCCACCATTCAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR GCA 72 bp ACTTTGCAGCGCTGCGCTCCCAAGCTAATCCCAAGCTaGCGAGGCCTTCCAAATAACTTGGACAGCCTTCCA +
Preference number: 3 (lower is better)
Translates to: TLQRCAPKLIPS*RGLPNNLDSLP
Trigger: TGGAAGGCTGTCCAAGTTATTTGGAAGGCCTCGGCAGCTTGGGATTAGCTTGGGAGCGCAGCGCTGCAAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR CCA 72 bp ATGATTTTGGCCTCCCTCAGATGGGTGGCCCAATGCTaGGATGCGGGTTTGATTCTGTGCTGCTGGCCACAA +
Preference number: 3 (lower is better)
Translates to: MILASLRWVAQC*DAGLILCCWPQ
Trigger: TTGTGGCCAGCAGCACAGAATCAAACCCGCATCCCAGCATTGGGCCACCCATCTGAGGGAGGCCAAAATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR CCA 72 bp CACATGGTTCTCACAGCCATCTCAGGGGCGGCTCTCTaGACTAGCATGTATCTGTCTGCAGCACAGCAGCAT +
Preference number: 3 (lower is better)
Translates to: HMVLTAISGAAL*TSMYLSAAQQH
Trigger: ATGCTGCTGTGCTGCAGACAGATACATGCTAGTCCAGAGAGCCGCCCCTGAGATGGCTGTGAGAACCATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR GCA 72 bp GGCCACAAAGCACCCGGGTCACTGATTCTGTTTAGGTaGCAACAATCCCCAAGACTCTCCAAGAGGCTGAAC +
Preference number: 3 (lower is better)
Translates to: GHKAPGSLILFR*QQSPRLSKRLN
Trigger: GTTCAGCCTCTTGGAGAGTCTTGGGGATTGTTGGCACCTAAACAGAATCAGTGACCCGGGTGCTTTGTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR CCA 72 bp CTGGGTAGTTTGTCTAAGGTGCTCCAGGGTCCCTCTTaGTCTGCAAGAGAAGTGTCCCTGCCATTTCTGGGT +
Preference number: 3 (lower is better)
Translates to: LGSLSKVLQGPS*SAREVSLPFLG
Trigger: ACCCAGAAATGGCAGGGACACTTCTCTTGCAGACCAAGAGGGACCCTGGAGCACCTTAGACAAACTACCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR CCA 72 bp ACAGCAGCATCTGTGATGATTTTGGCCTCCCTCAGATaGGTGGCCCAATGCTGGGATGCGGGTTTGATTCTG +
Preference number: 3 (lower is better)
Translates to: TAASVMILASLR*VAQCWDAGLIL
Trigger: CAGAATCAAACCCGCATCCCAGCATTGGGCCACCCATCTGAGGGAGGCCAAAATCATCACAGATGCTGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR CCA 72 bp GACAGCCTTCCATCCTTATCTTACGCCTTAGACACATaGTTCTCACAGCCATCTCAGGGGCGGCTCTCTGGA +
Preference number: 3 (lower is better)
Translates to: DSLPSLSYALDT*FSQPSQGRLSG
Trigger: TCCAGAGAGCCGCCCCTGAGATGGCTGTGAGAACCATGTGTCTAAGGCGTAAGATAAGGATGGAAGGCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR TCA 72 bp GAGGAACCTGAACCCCTCTGCAAGTATTCTCTTTCCTaGCCAGCTGGGCTTGCCGCACTTTGTGAGATTTGC +
Preference number: 3 (lower is better)
Translates to: EEPEPLCKYSLS*PAGLAALCEIC
Trigger: GCAAATCTCACAAAGTGCGGCAAGCCCAGCTGGTCAGGAAAGAGAATACTTGCAGAGGGGTTCAGGTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR TCA 72 bp GATTCTGTGCTGCTGGCCACAAAGCACCCGGGTCACTaGTTCTGTTTAGGTGCCAACAATCCCCAAGACTCT +
Preference number: 3 (lower is better)
Translates to: DSVLLATKHPGH*FCLGANNPQDS
Trigger: AGAGTCTTGGGGATTGTTGGCACCTAAACAGAATCAGTGACCCGGGTGCTTTGTGGCCAGCAGCACAGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR GCA 72 bp CTGTGTGGTCTTTTCATATTTTCCACTTTGCAGCGCTaGGCTCCCAAGCTAATCCCAAGCTGCCGAGGCCTT +
Preference number: 3 (lower is better)
Translates to: LCGLFIFSTLQR*APKLIPSCRGL
Trigger: AAGGCCTCGGCAGCTTGGGATTAGCTTGGGAGCGCAGCGCTGCAAAGTGGAAAATATGAAAAGACCACACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR GCA 72 bp GTCTGTGGCAACTGGGAAGAACAGTGGAGATACGGGTaGTGGGGCTTTATCTCATCTCCTGTAATGAGGGAC +
Preference number: 3 (lower is better)
Translates to: VCGNWEEQWRYG*WGFISSPVMRD
Trigger: GTCCCTCATTACAGGAGATGAGATAAAGCCCCAGCACCCGTATCTCCACTGTTCTTCCCAGTTGCCACAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545027.1
3UTR TCA 72 bp ACAGACCTGATCCACGTGGCAGGAAAAAGAGGAACCTaGACCCCTCTGCAAGTATTCTCTTTCCTGACCAGC +
Preference number: 3 (lower is better)
Translates to: TDLIHVAGKRGT*TPLQVFSFLTS
Trigger: GCTGGTCAGGAAAGAGAATACTTGCAGAGGGGTTCAGGTTCCTCTTTTTCCTGCCACGTGGATCAGGTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR TCA 72 bp GAGATCCAGCAGAATCTCATCACCATTCAAGCAGACTaGGACCCACTCGCCTCATATAGAAGGTCCCTGACC +
Preference number: 3 (lower is better)
Translates to: EIQQNLITIQAD*DPLASYRRSLT
Trigger: GGTCAGGGACCTTCTATATGAGGCGAGTGGGTCTCAGTCTGCTTGAATGGTGATGAGATTCTGCTGGATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR TCA 72 bp AGACTGAGTTCTTGCACTTGGGTGAAGAGGCCAGACTaGGAGGCTCTAATCCTAGCAACATCATGCCCTGGT +
Preference number: 3 (lower is better)
Translates to: RLSSCTWVKRPD*EALILATSCPG
Trigger: ACCAGGGCATGATGTTGCTAGGATTAGAGCCTCTCAGTCTGGCCTCTTCACCCAAGTGCAAGAACTCAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR CCA 72 bp AGATGGAGAGATTCCAAATCAGAAGGAAACGTGACATaGAGTCCCAGGCTCATGCCCTCCGCCAGAATTCCA +
Preference number: 3 (lower is better)
Translates to: RWRDSKSEGNVT*SPRLMPSARIP
Trigger: TGGAATTCTGGCGGAGGGCATGAGCCTGGGACTCCATGTCACGTTTCCTTCTGATTTGGAATCTCTCCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR CCA 72 bp CCAAACTCTACATGTCTGACTCAACTCAGAAAAAGCTaGGGAGAAGCCCAGGGGTCTGGTAACTTCACCTGG +
Preference number: 3 (lower is better)
Translates to: PNSTCLTQLRKS*GEAQGSGNFTW
Trigger: CCAGGTGAAGTTACCAGACCCCTGGGCTTCTCCCCAGCTTTTTCTGAGTTGAGTCAGACATGTAGAGTTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR-3UTR CAA 90 bp GTCACGCCGGGTGGATTAGGCAGGTACAATATAAACTCTGAAAGCAGGGATTATCCTGACCAGCTGGGCTaGCCGCACTTTGTGAGATTT +
Preference number: 3 (lower is better)
Translates to: VTPGGLGRYNINSESRDYPDQLG*PHFVRF
Trigger: AAATCTCACAAAGTGCGGCAAGCCCAGCTGGTCAGG...ATAATCCCTGCTTTCAGAGTTTATATTGTACCTGCCTAATCCACCCGGCGTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR-3UTR CAA 90 bp GTCACGCCGGGTGGATTAGGCAGGTACAATATAAACTCTGAAAGCAGGGATTATCCTAGGTTGGTGTCCTaGTCAGTAAGGCCGAGGGAA +
Preference number: 3 (lower is better)
Translates to: VTPGGLGRYNINSESRDYPRLVS*SVRPRE
Trigger: TTCCCTCGGCCTTACTGACAAGGACACCAACCTAGG...ATAATCCCTGCTTTCAGAGTTTATATTGTACCTGCCTAATCCACCCGGCGTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR TCA 72 bp ATTACAGATGGAGAGATTCCAAATCAGAAGGAAACGTaGCATGGAGTCCCAGGCTCATGCCCTCCGCCAGAA +
Preference number: 3 (lower is better)
Translates to: ITDGEIPNQKET*HGVPGSCPPPE
Trigger: TTCTGGCGGAGGGCATGAGCCTGGGACTCCATGTCACGTTTCCTTCTGATTTGGAATCTCTCCATCTGTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR TCA 72 bp CCTACTGAATGCTCTCAAAAGACACCTGCAGCGTGCTaGGATCCAGCAGAATCTCATCACCATTCAAGCAGA +
Preference number: 3 (lower is better)
Translates to: PTECSQKTPAAC*DPAESHHHSSR
Trigger: TCTGCTTGAATGGTGATGAGATTCTGCTGGATCTCAGCACGCTGCAGGTGTCTTTTGAGAGCATTCAGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR TCA 72 bp CACGCCGGGTGGATTAGGCAGGTACAATATAAACTCTaGAAGCAGGGATTATGGCTGATTGAGCTTTGGGTC +
Preference number: 3 (lower is better)
Translates to: HAGWIRQVQYKL*KQGLWLIELWV
Trigger: GACCCAAAGCTCAATCAGCCATAATCCCTGCTTTCAGAGTTTATATTGTACCTGCCTAATCCACCCGGCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR GCA 72 bp GTGTCCTTGTCAGTAAGGCCGAGGGAAAATTCCTCTTaGCTGTGTGACCCAAACTCTACATGTCTGACTCAA +
Preference number: 3 (lower is better)
Translates to: VSLSVRPRENSS*LCDPNSTCLTQ
Trigger: TTGAGTCAGACATGTAGAGTTTGGGTCACACAGGCAAGAGGAATTTTCCCTCGGCCTTACTGACAAGGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR TCA 72 bp ATCTTAGAGGCTGAAATAGGGATCACCATGTCCTACTaGATGCTCTCAAAAGACACCTGCAGCGTGCTGAGA +
Preference number: 3 (lower is better)
Translates to: ILEAEIGITMSY*MLSKDTCSVLR
Trigger: TCTCAGCACGCTGCAGGTGTCTTTTGAGAGCATTCAGTAGGACATGGTGATCCCTATTTCAGCCTCTAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR CCA 72 bp ATTGGTGATGCCACCTTAAGCAAAACCAAGTCGCCCTaGGTCAAGATCTTAGAGTTCATGTTACCTTCAACA +
Preference number: 3 (lower is better)
Translates to: IGDATLSKTKSP*VKILEFMLPST
Trigger: TGTTGAAGGTAACATGAACTCTAAGATCTTGACCCAGGGCGACTTGGTTTTGCTTAAGGTGGCATCACCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR-3UTR CAA 90 bp GCAGTTAGGGGAATTACGAAATCCTTATTGGTAGTACAGATTGATATCCCTTATAGCGTTCAGGAAGGTTaGGATTTTGGGGCATTTGGG +
Preference number: 3 (lower is better)
Translates to: AVRGITKSLLVVQIDIPYSVQEG*DFGAFG
Trigger: CCCAAATGCCCCAAAATCCAAACCTTCCTGAACGCT...ATAAGGGATATCAATCTGTACTACCAATAAGGATTTCGTAATTCCCCTAACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR TCA 72 bp AAAAGACATTGGATCAGAGGGTTCCAAACATACTGGTaGAAGGAGAAAATCCATTGGTCTATTATTCCTCTT +
Preference number: 3 (lower is better)
Translates to: KRHWIRGFQTYW*KEKIHWSIIPL
Trigger: AAGAGGAATAATAGACCAATGGATTTTCTCCTTTCACCAGTATGTTTGGAACCCTCTGATCCAATGTCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR GCA 90 bp AGCCCGCCTGCTCCGTCACACTTCCAGCAATCCTGGTGGGCAGGGGTTCCCTGGGCTGGATCACGCGTGTaGTCTCCTGCCGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SPPAPSHFQQSWWAGVPWAGSRV*SPAGGW
Trigger: CCAGCCCCCGGCAGGAGAGCACACGCGTGATCCAGC...CCAGGGAACCCCTGCCCACCAGGATTGCTGGAAGTGTGACGGAGCAGGCGGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp AGGTTGAATGGTGGGGCGCCTGTGACAGTAGGAGTGGGCTGGCTATGCCCGTGTTGGGCAGGGGTTCCCTaGGCTGCTGGCCCGCTGAGG +
Preference number: 4 (lower is better)
Translates to: RLNGGAPVTVGVGWLCPCWAGVP*AAGPLR
Trigger: CCTCAGCGGGCCAGCAGCCCAGGGAACCCCTGCCCA...ACACGGGCATAGCCAGCCCACTCCTACTGTCACAGGCGCCCCACCATTCAACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp AGGTTGAATGGTGGGGCGCCTGTGACAGTAGGAGTGGGCTGGCTATGCCCGTGTGGGCTGCTGGCCCGCTaGGGTGGACTGTTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: RLNGGAPVTVGVGWLCPCGLLAR*GGLLVP
Trigger: AGGAACCAACAGTCCACCTCAGCGGGCCAGCAGCCC...ACACGGGCATAGCCAGCCCACTCCTACTGTCACAGGCGCCCCACCATTCAACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR GCA 90 bp AGGTTGAATGGTGGGGCGCCTGTGACAGTAGGAGTGGGCTGGCTATGCCCGTGTACGCGTGTGCTCTCCTaGCGGGGGCTGGATGGCTTC +
Preference number: 4 (lower is better)
Translates to: RLNGGAPVTVGVGWLCPCTRVLS*RGLDGF
Trigger: GAAGCCATCCAGCCCCCGGCAGGAGAGCACACGCGT...ACACGGGCATAGCCAGCCCACTCCTACTGTCACAGGCGCCCCACCATTCAACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp AGCCCGCCTGCTCCGTCACACTTCCAGCAATCCTGGTGGGCAGGGGTTCCCTGGCACATTATCCACGGATaGCCTGGGGGTCCTCTGGAC +
Preference number: 4 (lower is better)
Translates to: SPPAPSHFQQSWWAGVPWHIIHG*PGGPLD
Trigger: GTCCAGAGGACCCCCAGGCCATCCGTGGATAATGTG...CCAGGGAACCCCTGCCCACCAGGATTGCTGGAAGTGTGACGGAGCAGGCGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp AGCCCGCCTGCTCCGTCACACTTCCAGCAATCCTGGTGGGCAGGGGTTCCCTGGCACACTGATTGCAACTaGGACTGCCCTCTGGGATCC +
Preference number: 4 (lower is better)
Translates to: SPPAPSHFQQSWWAGVPWHTDCN*DCPLGS
Trigger: GGATCCCAGAGGGCAGTCTCAGTTGCAATCAGTGTG...CCAGGGAACCCCTGCCCACCAGGATTGCTGGAAGTGTGACGGAGCAGGCGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp AGCCCGCCTGCTCCGTCACACTTCCAGCAATCCTGGTGGGCAGGGGTTCCCTGGAAGTATTCTCTTTCCTaGCCAGCTGGGCTTGCCGCA +
Preference number: 4 (lower is better)
Translates to: SPPAPSHFQQSWWAGVPWKYSLS*PAGLAA
Trigger: TGCGGCAAGCCCAGCTGGTCAGGAAAGAGAATACTT...CCAGGGAACCCCTGCCCACCAGGATTGCTGGAAGTGTGACGGAGCAGGCGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp AGGAAACGTGACATGGAGTCCCAGGCTCATGCCCTCCGCCAGAATTCCAGCCCCTTTCCTGGGTGGGAATaGGCCACACAGGGTGAGCCC +
Preference number: 4 (lower is better)
Translates to: RKRDMESQAHALRQNSSPFPGWE*ATQGEP
Trigger: GGGCTCACCCTGTGTGGCTCATTCCCACCCAGGAAA...GGGGCTGGAATTCTGGCGGAGGGCATGAGCCTGGGACTCCATGTCACGTTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp ATCTTACGCCTTAGACACATGGTTCTCACAGCCATCTCAGGGGCGGCTCTCTGGCTGCCGGGGGCTGGATaGCTTCGGGTGGGACTCGGA +
Preference number: 4 (lower is better)
Translates to: ILRLRHMVLTAISGAALWLPGAG*LRVGLG
Trigger: TCCGAGTCCCACCCGAAGCCATCCAGCCCCCGGCAG...CCAGAGAGCCGCCCCTGAGATGGCTGTGAGAACCATGTGTCTAAGGCGTAAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp AGCCCGCCTGCTCCGTCACACTTCCAGCAATCCTGGTGGGCAGGGGTTCCCTGGCTGCTATTCTCCCAATaGGCATGGCGTGCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: SPPAPSHFQQSWWAGVPWLLFSQ*AWRALQ
Trigger: CTGAAGAGCACGCCATGCCCATTGGGAGAATAGCAG...CCAGGGAACCCCTGCCCACCAGGATTGCTGGAAGTGTGACGGAGCAGGCGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp AGCCCGCCTGCTCCGTCACACTTCCAGCAATCCTGGTGGGCAGGGGTTCCCTGGCAACTCAGAAAAAGCTaGGGAGAAGCCCAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: SPPAPSHFQQSWWAGVPWQLRKS*GEAQGS
Trigger: AGACCCCTGGGCTTCTCCCCAGCTTTTTCTGAGTTG...CCAGGGAACCCCTGCCCACCAGGATTGCTGGAAGTGTGACGGAGCAGGCGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR GCA 90 bp AGAGATTCCAAATCAGAAGGAAACGTGACATGGAGTCCCAGGCTCATGCCCTCCGACCGGAGGGGCCGCTaGTCGGGGTCAGGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: RDSKSEGNVTWSPRLMPSDRRGR*SGSGEG
Trigger: GCCTTCTCCTGACCCCGAGCAGCGGCCCCTCCGGTC...GGAGGGCATGAGCCTGGGACTCCATGTCACGTTTCCTTCTGATTTGGAATCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR GCA 90 bp GACTGCTGGGCCTGTGTGGTCTTTTCATATTTTCCACTTTGCAGCGCTGCGCTCAGGGGTTCCCTGGGCTaGTGGCCCGCTGAGGTGGAC +
Preference number: 4 (lower is better)
Translates to: DCWACVVFSYFPLCSAALRGSLG*WPAEVD
Trigger: GTCCACCTCAGCGGGCCAGCAGCCCAGGGAACCCCT...GAGCGCAGCGCTGCAAAGTGGAAAATATGAAAAGACCACACAGGCCCAGCAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR GCA 90 bp AGCCCGCCTGCTCCGTCACACTTCCAGCAATCCTGGTGGGCAGGGGTTCCCTGGTCATATTTTCCACTTTaGAGCGCTGCGCTCCCAAGC +
Preference number: 4 (lower is better)
Translates to: SPPAPSHFQQSWWAGVPWSYFPL*SAALPS
Trigger: GCTTGGGAGCGCAGCGCTGCAAAGTGGAAAATATGA...CCAGGGAACCCCTGCCCACCAGGATTGCTGGAAGTGTGACGGAGCAGGCGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp TCCAAATCAGAAGGAAACGTGACATGGAGTCCCAGGCTCATGCCCTCCGCCAGACTGGATGGCTTCGGGTaGGACTCGGAGGACGCTGGG +
Preference number: 4 (lower is better)
Translates to: SKSEGNVTWSPRLMPSARLDGFG*DSEDAG
Trigger: CCCAGCGTCCTCCGAGTCCCACCCGAAGCCATCCAG...TCTGGCGGAGGGCATGAGCCTGGGACTCCATGTCACGTTTCCTTCTGATTTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp TCCCGGAGGAGCTGTGAGTTTCTCCCCCAACTGAGTAGAGGAAACAGAGGGGAATCTCCTGCCGGGGGCTaGATGGCTTCGGGTGGGACT +
Preference number: 4 (lower is better)
Translates to: SRRSCEFLPQLSRGNRGESPAGG*MASGGT
Trigger: AGTCCCACCCGAAGCCATCCAGCCCCCGGCAGGAGA...TTCCCCTCTGTTTCCTCTACTCAGTTGGGGGAGAAACTCACAGCTCCTCCGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp AGGAAACGTGACATGGAGTCCCAGGCTCATGCCCTCCGCCAGAATTCCAGCCCCTCCCGGAAGGTTGAATaGTGGGGCGCCTGTGACAGT +
Preference number: 4 (lower is better)
Translates to: RKRDMESQAHALRQNSSPSRKVE*WGACDS
Trigger: ACTGTCACAGGCGCCCCACCATTCAACCTTCCGGGA...GGGGCTGGAATTCTGGCGGAGGGCATGAGCCTGGGACTCCATGTCACGTTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR CAA 72 bp TCCGCCAGAATTCCAGCCCCGCCTGTGCTGGGTAGTTaGTCTAAGGTGCTCCAGGGTCCCTCTTGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: SARIPAPPVLGS*SKVLQGPSWSA
Trigger: TGCAGACCAAGAGGGACCCTGGAGCACCTTAGACAAACTACCCAGCACAGGCGGGGCTGGAATTCTGGCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR GCA 90 bp AGGTTGAATGGTGGGGCGCCTGTGACAGTAGGAGTGGGCTGGCTATGCCCGTGTTTCAGGATCAGAGGGTaGATGATGGGGCTGGGCATC +
Preference number: 4 (lower is better)
Translates to: RLNGGAPVTVGVGWLCPCFRIRG*MMGLGI
Trigger: GATGCCCAGCCCCATCATGCACCCTCTGATCCTGAA...ACACGGGCATAGCCAGCCCACTCCTACTGTCACAGGCGCCCCACCATTCAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR GCA 90 bp AGGTTGAATGGTGGGGCGCCTGTGACAGTAGGAGTGGGCTGGCTATGCCCGTGTCATCTGAATCTCAACTaGAGGCAGGGCGGGAGGACA +
Preference number: 4 (lower is better)
Translates to: RLNGGAPVTVGVGWLCPCHLNLN*RQGGRT
Trigger: TGTCCTCCCGCCCTGCCTGCAGTTGAGATTCAGATG...ACACGGGCATAGCCAGCCCACTCCTACTGTCACAGGCGCCCCACCATTCAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp AGCCCGCCTGCTCCGTCACACTTCCAGCAATCCTGGTGGGCAGGGGTTCCCTGGATGGTGGGAGGGTTATaGTGCACATTATCCACGGAT +
Preference number: 4 (lower is better)
Translates to: SPPAPSHFQQSWWAGVPWMVGGL*CTLSTD
Trigger: ATCCGTGGATAATGTGCACCATAACCCTCCCACCAT...CCAGGGAACCCCTGCCCACCAGGATTGCTGGAAGTGTGACGGAGCAGGCGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp TGCTGGGTAGTTTGTCTAAGGTGCTCCAGGGTCCCTCTTGGTCTGCAAGAGAAGGGTTCCCTGGGCTGCTaGCCCGCTGAGGTGGACTGT +
Preference number: 4 (lower is better)
Translates to: CWVVCLRCSRVPLGLQEKGSLGC*PAEVDC
Trigger: ACAGTCCACCTCAGCGGGCCAGCAGCCCAGGGAACC...CTTCTCTTGCAGACCAAGAGGGACCCTGGAGCACCTTAGACAAACTACCCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp AGGTTGAATGGTGGGGCGCCTGTGACAGTAGGAGTGGGCTGGCTATGCCCGTGTGAAGGAAACGTGACATaGAGTCCCAGGCTCATGCCC +
Preference number: 4 (lower is better)
Translates to: RLNGGAPVTVGVGWLCPCEGNVT*SPRLMP
Trigger: GGGCATGAGCCTGGGACTCCATGTCACGTTTCCTTC...ACACGGGCATAGCCAGCCCACTCCTACTGTCACAGGCGCCCCACCATTCAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp AGGTTGAATGGTGGGGCGCCTGTGACAGTAGGAGTGGGCTGGCTATGCCCGTGTTCTGGTAACTTCACCTaGGAGCTGCTGCTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: RLNGGAPVTVGVGWLCPCSGNFT*ELLLRA
Trigger: TGCCCTCAGCAGCAGCTCCCAGGTGAAGTTACCAGA...ACACGGGCATAGCCAGCCCACTCCTACTGTCACAGGCGCCCCACCATTCAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp AGGAAACGTGACATGGAGTCCCAGGCTCATGCCCTCCGCCAGAATTCCAGCCCCACAGTAGGAGTGGGCTaGCTATGCCCGTGTGTCTAC +
Preference number: 4 (lower is better)
Translates to: RKRDMESQAHALRQNSSPTVGVG*LCPCVY
Trigger: GTAGACACACGGGCATAGCCAGCCCACTCCTACTGT...GGGGCTGGAATTCTGGCGGAGGGCATGAGCCTGGGACTCCATGTCACGTTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp AGGTTGAATGGTGGGGCGCCTGTGACAGTAGGAGTGGGCTGGCTATGCCCGTGTCATTTTCAGCCCACTTaGGCCACTGGGCTACGTCAT +
Preference number: 4 (lower is better)
Translates to: RLNGGAPVTVGVGWLCPCHFQPT*ATGLRH
Trigger: ATGACGTAGCCCAGTGGCTCAAGTGGGCTGAAAATG...ACACGGGCATAGCCAGCCCACTCCTACTGTCACAGGCGCCCCACCATTCAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp AGGAAACGTGACATGGAGTCCCAGGCTCATGCCCTCCGCCAGAATTCCAGCCCCTCAGGAGAAGGCCGGTaGTTTGTCGTGATAGGTGAC +
Preference number: 4 (lower is better)
Translates to: RKRDMESQAHALRQNSSPSGEGR*FVVIGD
Trigger: GTCACCTATCACGACAAATCACCGGCCTTCTCCTGA...GGGGCTGGAATTCTGGCGGAGGGCATGAGCCTGGGACTCCATGTCACGTTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp CAGCCTTCCATCCTTATCTTACGCCTTAGACACATGGTTCTCACAGCCATCTCATGCGGCCTGGGTCCCTaGGCTCTCTCAGCCGGGGAG +
Preference number: 4 (lower is better)
Translates to: QPSILILRLRHMVLTAISCGLGP*ALSAGE
Trigger: CTCCCCGGCTGAGAGAGCTCAGGGACCCAGGCCGCA...TGAGATGGCTGTGAGAACCATGTGTCTAAGGCGTAAGATAAGGATGGAAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp TTACGCCTTAGACACATGGTTCTCACAGCCATCTCAGGGGCGGCTCTCTGGACTGGATCAGAGGGTGCATaGTGGGGCTGGGCATCAGCT +
Preference number: 4 (lower is better)
Translates to: LRLRHMVLTAISGAALWTGSEGA*WGWASA
Trigger: AGCTGATGCCCAGCCCCATCATGCACCCTCTGATCC...AGTCCAGAGAGCCGCCCCTGAGATGGCTGTGAGAACCATGTGTCTAAGGCGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp AGGTTGAATGGTGGGGCGCCTGTGACAGTAGGAGTGGGCTGGCTATGCCCGTGTGTGAAGAGGCCAGACTaGGAGGCTCTAATCCTAGCA +
Preference number: 4 (lower is better)
Translates to: RLNGGAPVTVGVGWLCPCVKRPD*EALILA
Trigger: TGCTAGGATTAGAGCCTCTCAGTCTGGCCTCTTCAC...ACACGGGCATAGCCAGCCCACTCCTACTGTCACAGGCGCCCCACCATTCAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR GCA 90 bp TGCTGGGTAGTTTGTCTAAGGTGCTCCAGGGTCCCTCTTGGTCTGCAAGAGAAGGGCTTCCCTTCCCTATaGAGCCCGTCCTCGGAGAGC +
Preference number: 4 (lower is better)
Translates to: CWVVCLRCSRVPLGLQEKGFPSL*SPSSES
Trigger: GCTCTCCGAGGACGGGCTGCATAGGGAAGGGAAGCC...CTTCTCTTGCAGACCAAGAGGGACCCTGGAGCACCTTAGACAAACTACCCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR GCA 90 bp ATCTTACGCCTTAGACACATGGTTCTCACAGCCATCTCAGGGGCGGCTCTCTGGGGAGTGGGCTGGCTATaGCCGTGTGTCTACCTGTGC +
Preference number: 4 (lower is better)
Translates to: ILRLRHMVLTAISGAALWGVGWL*PCVYLC
Trigger: GCACAGGTAGACACACGGGCATAGCCAGCCCACTCC...CCAGAGAGCCGCCCCTGAGATGGCTGTGAGAACCATGTGTCTAAGGCGTAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp TTACGCCTTAGACACATGGTTCTCACAGCCATCTCAGGGGCGGCTCTCTGGACTTTCTCCCAATGGGCATaGCGTGCTCTTCAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: LRLRHMVLTAISGAALWTFSQWA*RALQAG
Trigger: CCCCGCCTGAAGAGCACGCCATGCCCATTGGGAGAA...AGTCCAGAGAGCCGCCCCTGAGATGGCTGTGAGAACCATGTGTCTAAGGCGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp ATCTTACGCCTTAGACACATGGTTCTCACAGCCATCTCAGGGGCGGCTCTCTGGGCTGGCCCGCTGAGGTaGACTGTTGGTTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: ILRLRHMVLTAISGAALWAGPLR*TVGSFS
Trigger: GCTGAAGGAACCAACAGTCCACCTCAGCGGGCCAGC...CCAGAGAGCCGCCCCTGAGATGGCTGTGAGAACCATGTGTCTAAGGCGTAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp TCCAAATCAGAAGGAAACGTGACATGGAGTCCCAGGCTCATGCCCTCCGCCAGATTCCAGCAATCCTGGTaGGCAGGGGTTCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: SKSEGNVTWSPRLMPSARFQQSW*AGVPWA
Trigger: AGCCCAGGGAACCCCTGCCCACCAGGATTGCTGGAA...TCTGGCGGAGGGCATGAGCCTGGGACTCCATGTCACGTTTCCTTCTGATTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp ATGCCCTCCGCCAGAATTCCAGCCCCGCCTGTGCTGGGTAGTTTGTCTAAGGTGACTGAGACTGCCCTCTaGGATCCTCCGTCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: MPSARIPAPPVLGSLSKVTETAL*DPPSPK
Trigger: CTTTGGAGACGGAGGATCCCAGAGGGCAGTCTCAGT...CACCTTAGACAAACTACCCAGCACAGGCGGGGCTGGAATTCTGGCGGAGGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp ATCTTACGCCTTAGACACATGGTTCTCACAGCCATCTCAGGGGCGGCTCTCTGGAGTCTTCCTCCATCCTaGGCGCTCGAGGCACTGGAA +
Preference number: 4 (lower is better)
Translates to: ILRLRHMVLTAISGAALWSLPPS*ALEALE
Trigger: TTCCAGTGCCTCGAGCGCTCAGGATGGAGGAAGACT...CCAGAGAGCCGCCCCTGAGATGGCTGTGAGAACCATGTGTCTAAGGCGTAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp GACTGCTGGGCCTGTGTGGTCTTTTCATATTTTCCACTTTGCAGCGCTGCGCTCCCTGGGAGCTGCTGCTaGGGGCACATATGTATCCCG +
Preference number: 4 (lower is better)
Translates to: DCWACVVFSYFPLCSAALPGSCC*GHICIP
Trigger: CGGGATACATATGTGCCCTCAGCAGCAGCTCCCAGG...GAGCGCAGCGCTGCAAAGTGGAAAATATGAAAAGACCACACAGGCCCAGCAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp AGCCCGCCTGCTCCGTCACACTTCCAGCAATCCTGGTGGGCAGGGGTTCCCTGGTTGATATCCCTTATCTaGAATGCTTGGGACCAGAAG +
Preference number: 4 (lower is better)
Translates to: SPPAPSHFQQSWWAGVPWLISLI*NAWDQK
Trigger: CTTCTGGTCCCAAGCATTTCAGATAAGGGATATCAA...CCAGGGAACCCCTGCCCACCAGGATTGCTGGAAGTGTGACGGAGCAGGCGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR GCA 90 bp AGGAAACGTGACATGGAGTCCCAGGCTCATGCCCTCCGCCAGAATTCCAGCCCCGTAGTTTGTCTAAGGTaGTCCAGGGTCCCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: RKRDMESQAHALRQNSSPVVCLR*SRVPLG
Trigger: ACCAAGAGGGACCCTGGAGCACCTTAGACAAACTAC...GGGGCTGGAATTCTGGCGGAGGGCATGAGCCTGGGACTCCATGTCACGTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp TCCAAATCAGAAGGAAACGTGACATGGAGTCCCAGGCTCATGCCCTCCGCCAGAGAGCGCTCGAGGCACTaGAACATGAAGTGGCGTCGA +
Preference number: 4 (lower is better)
Translates to: SKSEGNVTWSPRLMPSARERSRH*NMKWRR
Trigger: TCGACGCCACTTCATGTTCCAGTGCCTCGAGCGCTC...TCTGGCGGAGGGCATGAGCCTGGGACTCCATGTCACGTTTCCTTCTGATTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp TCCAAATCAGAAGGAAACGTGACATGGAGTCCCAGGCTCATGCCCTCCGCCAGACCTGCTCCAGTAAATTaGCTGCAAGCGCAGGTGCGC +
Preference number: 4 (lower is better)
Translates to: SKSEGNVTWSPRLMPSARPAPVN*LQAQVR
Trigger: GCGCACCTGCGCTTGCAGCCAATTTACTGGAGCAGG...TCTGGCGGAGGGCATGAGCCTGGGACTCCATGTCACGTTTCCTTCTGATTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp TCCCGGAGGAGCTGTGAGTTTCTCCCCCAACTGAGTAGAGGAAACAGAGGGGAATATCCACGGATGGCCTaGGGGTCCTCTGGACACAGT +
Preference number: 4 (lower is better)
Translates to: SRRSCEFLPQLSRGNRGEYPRMA*GSSGHS
Trigger: ACTGTGTCCAGAGGACCCCCAGGCCATCCGTGGATA...TTCCCCTCTGTTTCCTCTACTCAGTTGGGGGAGAAACTCACAGCTCCTCCGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp TCCAAATCAGAAGGAAACGTGACATGGAGTCCCAGGCTCATGCCCTCCGCCAGACAGCCCCGCCTGTGCTaGGTAGTTTGTCTAAGGTGC +
Preference number: 4 (lower is better)
Translates to: SKSEGNVTWSPRLMPSARQPRLC*VVCLRC
Trigger: GCACCTTAGACAAACTACCCAGCACAGGCGGGGCTG...TCTGGCGGAGGGCATGAGCCTGGGACTCCATGTCACGTTTCCTTCTGATTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp TGCTGGGTAGTTTGTCTAAGGTGCTCCAGGGTCCCTCTTGGTCTGCAAGAGAAGAGAGCCTGGACTGTTTaGAATCCACGGAGTGCCGGG +
Preference number: 4 (lower is better)
Translates to: CWVVCLRCSRVPLGLQEKRAWTV*NPRSAG
Trigger: CCCGGCACTCCGTGGATTTCAAACAGTCCAGGCTCT...CTTCTCTTGCAGACCAAGAGGGACCCTGGAGCACCTTAGACAAACTACCCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp TGCTGGGTAGTTTGTCTAAGGTGCTCCAGGGTCCCTCTTGGTCTGCAAGAGAAGGCCAGGTCTTCCCGATaGGAGAGGTTGATGGGCTTC +
Preference number: 4 (lower is better)
Translates to: CWVVCLRCSRVPLGLQEKARSSR*ERLMGF
Trigger: GAAGCCCATCAACCTCTCTCATCGGGAAGACCTGGC...CTTCTCTTGCAGACCAAGAGGGACCCTGGAGCACCTTAGACAAACTACCCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp ATGCCCTCCGCCAGAATTCCAGCCCCGCCTGTGCTGGGTAGTTTGTCTAAGGTGAATCAGAAGGAAACGTaGCATGGAGTCCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: MPSARIPAPPVLGSLSKVNQKET*HGVPGS
Trigger: TGAGCCTGGGACTCCATGTCACGTTTCCTTCTGATT...CACCTTAGACAAACTACCCAGCACAGGCGGGGCTGGAATTCTGGCGGAGGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp GACTGCTGGGCCTGTGTGGTCTTTTCATATTTTCCACTTTGCAGCGCTGCGCTCATCCCGGAGGAGCTGTaGGTTTCTCCCCCAACTGAG +
Preference number: 4 (lower is better)
Translates to: DCWACVVFSYFPLCSAALIPEEL*VSPPTE
Trigger: CTCAGTTGGGGGAGAAACTCACAGCTCCTCCGGGAT...GAGCGCAGCGCTGCAAAGTGGAAAATATGAAAAGACCACACAGGCCCAGCAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp AGCCCGCCTGCTCCGTCACACTTCCAGCAATCCTGGTGGGCAGGGGTTCCCTGGCAAACTCTACATGTCTaGCTCAACTCAGAAAAAGCT +
Preference number: 4 (lower is better)
Translates to: SPPAPSHFQQSWWAGVPWQTLHV*LNSEKA
Trigger: AGCTTTTTCTGAGTTGAGTCAGACATGTAGAGTTTG...CCAGGGAACCCCTGCCCACCAGGATTGCTGGAAGTGTGACGGAGCAGGCGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp AGCCCGCCTGCTCCGTCACACTTCCAGCAATCCTGGTGGGCAGGGGTTCCCTGGGTACAATATAAACTCTaGAAGCAGGGATTATGGCTG +
Preference number: 4 (lower is better)
Translates to: SPPAPSHFQQSWWAGVPWVQYKL*KQGLWL
Trigger: CAGCCATAATCCCTGCTTTCAGAGTTTATATTGTAC...CCAGGGAACCCCTGCCCACCAGGATTGCTGGAAGTGTGACGGAGCAGGCGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR GCA 90 bp ATCTTACGCCTTAGACACATGGTTCTCACAGCCATCTCAGGGGCGGCTCTCTGGGGCCCAATGCTGGGATaGGGGTTTGATTCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: ILRLRHMVLTAISGAALWGPMLG*GFDSVL
Trigger: CAGCACAGAATCAAACCCGCATCCCAGCATTGGGCC...CCAGAGAGCCGCCCCTGAGATGGCTGTGAGAACCATGTGTCTAAGGCGTAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR GCA 90 bp AGGAAACGTGACATGGAGTCCCAGGCTCATGCCCTCCGCCAGAATTCCAGCCCCAAGCTAATCCCAAGCTaGCGAGGCCTTCCAAATAAC +
Preference number: 4 (lower is better)
Translates to: RKRDMESQAHALRQNSSPKLIPS*RGLPNN
Trigger: GTTATTTGGAAGGCCTCGGCAGCTTGGGATTAGCTT...GGGGCTGGAATTCTGGCGGAGGGCATGAGCCTGGGACTCCATGTCACGTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR GCA 90 bp AGGAAACGTGACATGGAGTCCCAGGCTCATGCCCTCCGCCAGAATTCCAGCCCCAATACTGTATCCAGGTaGTGGCACTACCCGGGTTTT +
Preference number: 4 (lower is better)
Translates to: RKRDMESQAHALRQNSSPNTVSR*WHYPGF
Trigger: AAAACCCGGGTAGTGCCAGCACCTGGATACAGTATT...GGGGCTGGAATTCTGGCGGAGGGCATGAGCCTGGGACTCCATGTCACGTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp TTCAGCCAAGACCCAACAGTAACAGGAACAGACCTGATCCACGTGGCAGGAAAAGGGCTGGGCATCAGCTaGATCACGCGTGTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: FSQDPTVTGTDLIHVAGKGLGIS*ITRVLS
Trigger: GGAGAGCACACGCGTGATCCAGCTGATGCCCAGCCC...TTTTCCTGCCACGTGGATCAGGTCTGTTCCTGTTACTGTTGGGTCTTGGCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp TTACGCCTTAGACACATGGTTCTCACAGCCATCTCAGGGGCGGCTCTCTGGACTTTGATTCTGTGCTGCTaGCCACAAAGCACCCGGGTC +
Preference number: 4 (lower is better)
Translates to: LRLRHMVLTAISGAALWTLILCC*PQSTRV
Trigger: GACCCGGGTGCTTTGTGGCCAGCAGCACAGAATCAA...AGTCCAGAGAGCCGCCCCTGAGATGGCTGTGAGAACCATGTGTCTAAGGCGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp GACTGCTGGGCCTGTGTGGTCTTTTCATATTTTCCACTTTGCAGCGCTGCGCTCTTGGCCTCCCTCAGATaGGTGGCCCAATGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: DCWACVVFSYFPLCSAALLASLR*VAQCWD
Trigger: ATCCCAGCATTGGGCCACCCATCTGAGGGAGGCCAA...GAGCGCAGCGCTGCAAAGTGGAAAATATGAAAAGACCACACAGGCCCAGCAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp GTGGAGATACGGGTGCTGGGGCTTTATCTCATCTCCTGTAATGAGGGACGTTTCAGTCTTCCTCCATCCTaGGCGCTCGAGGCACTGGAA +
Preference number: 4 (lower is better)
Translates to: VEIRVLGLYLISCNEGRFSLPPS*ALEALE
Trigger: TTCCAGTGCCTCGAGCGCTCAGGATGGAGGAAGACT...GAAACGTCCCTCATTACAGGAGATGAGATAAAGCCCCAGCACCCGTATCTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545027.1
CDS-3UTR TCA 90 bp GACTGCTGGGCCTGTGTGGTCTTTTCATATTTTCCACTTTGCAGCGCTGCGCTCGAGGACGCTGGGCAGTaGTTATTCTCCATGGGAGAC +
Preference number: 4 (lower is better)
Translates to: DCWACVVFSYFPLCSAALEDAGQ*LFSMGD
Trigger: GTCTCCCATGGAGAATAATCACTGCCCAGCGTCCTC...GAGCGCAGCGCTGCAAAGTGGAAAATATGAAAAGACCACACAGGCCCAGCAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp TCCCGGAGGAGCTGTGAGTTTCTCCCCCAACTGAGTAGAGGAAACAGAGGGGAACTGTCAGAAGGCATCTaGATCTCAACTGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: SRRSCEFLPQLSRGNRGELSEGI*ISTAGR
Trigger: CCTGCCTGCAGTTGAGATTCAGATGCCTTCTGACAG...TTCCCCTCTGTTTCCTCTACTCAGTTGGGGGAGAAACTCACAGCTCCTCCGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp ATGCCCTCCGCCAGAATTCCAGCCCCGCCTGTGCTGGGTAGTTTGTCTAAGGTGACTGCCTGGCTAGCTTaGGATGTAGGAATGAGAACT +
Preference number: 4 (lower is better)
Translates to: MPSARIPAPPVLGSLSKVTAWLA*DVGMRT
Trigger: AGTTCTCATTCCTACATCTCAAGCTAGCCAGGCAGT...CACCTTAGACAAACTACCCAGCACAGGCGGGGCTGGAATTCTGGCGGAGGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp TCCAAATCAGAAGGAAACGTGACATGGAGTCCCAGGCTCATGCCCTCCGCCAGATTGGAGCCTAGGCAGTaGAAGGTGGGAATGGTGGTT +
Preference number: 4 (lower is better)
Translates to: SKSEGNVTWSPRLMPSARLEPRQ*KVGMVV
Trigger: AACCACCATTCCCACCTTTCACTGCCTAGGCTCCAA...TCTGGCGGAGGGCATGAGCCTGGGACTCCATGTCACGTTTCCTTCTGATTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR GCA 90 bp TCCAAATCAGAAGGAAACGTGACATGGAGTCCCAGGCTCATGCCCTCCGCCAGAGGGCTACGTCATCCCTaGTCCAGTAAATTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SKSEGNVTWSPRLMPSARGLRHP*SSKLAA
Trigger: TGCAGCCAATTTACTGGAGCAGGGATGACGTAGCCC...TCTGGCGGAGGGCATGAGCCTGGGACTCCATGTCACGTTTCCTTCTGATTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR GCA 90 bp TTACGCCTTAGACACATGGTTCTCACAGCCATCTCAGGGGCGGCTCTCTGGACTGTGGGAGGGTTATGGTaGACATTATCCACGGATGGC +
Preference number: 4 (lower is better)
Translates to: LRLRHMVLTAISGAALWTVGGLW*TLSTDG
Trigger: GCCATCCGTGGATAATGTGCACCATAACCCTCCCAC...AGTCCAGAGAGCCGCCCCTGAGATGGCTGTGAGAACCATGTGTCTAAGGCGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR GCA 90 bp TGCTGGGTAGTTTGTCTAAGGTGCTCCAGGGTCCCTCTTGGTCTGCAAGAGAAGGCGGGTTTGATTCTGTaGTGCTGGCCACAAAGCACC +
Preference number: 4 (lower is better)
Translates to: CWVVCLRCSRVPLGLQEKAGLIL*CWPQST
Trigger: GGTGCTTTGTGGCCAGCAGCACAGAATCAAACCCGC...CTTCTCTTGCAGACCAAGAGGGACCCTGGAGCACCTTAGACAAACTACCCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR GCA 90 bp TCCAAATCAGAAGGAAACGTGACATGGAGTCCCAGGCTCATGCCCTCCGCCAGACCGTGTGTCTACCTGTaGTCTGATAAGAGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: SKSEGNVTWSPRLMPSARPCVYL*SDKRQG
Trigger: TCCCTGCCTCTTATCAGAGCACAGGTAGACACACGG...TCTGGCGGAGGGCATGAGCCTGGGACTCCATGTCACGTTTCCTTCTGATTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR GCA 90 bp AGGAAACGTGACATGGAGTCCCAGGCTCATGCCCTCCGCCAGAATTCCAGCCCCAAGATTCAGGGGGTCTaGAGCTGTTTAGTGTTGATG +
Preference number: 4 (lower is better)
Translates to: RKRDMESQAHALRQNSSPKIQGV*SCLVLM
Trigger: CATCAACACTAAACAGCTGCAGACCCCCTGAATCTT...GGGGCTGGAATTCTGGCGGAGGGCATGAGCCTGGGACTCCATGTCACGTTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR GCA 90 bp AGGTTGAATGGTGGGGCGCCTGTGACAGTAGGAGTGGGCTGGCTATGCCCGTGTTGGTTTGCAGGTGGTTaGGGTCACAAAGAGAAATCA +
Preference number: 4 (lower is better)
Translates to: RLNGGAPVTVGVGWLCPCWFAGG*GHKEKS
Trigger: TGATTTCTCTTTGTGACCGCAACCACCTGCAAACCA...ACACGGGCATAGCCAGCCCACTCCTACTGTCACAGGCGCCCCACCATTCAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp GACTGCTGGGCCTGTGTGGTCTTTTCATATTTTCCACTTTGCAGCGCTGCGCTCAGGGTGAGCCCAGGCTaGATCCTGAGCCTAATTCCA +
Preference number: 4 (lower is better)
Translates to: DCWACVVFSYFPLCSAALRVSPG*ILSLIP
Trigger: TGGAATTAGGCTCAGGATCCAGCCTGGGCTCACCCT...GAGCGCAGCGCTGCAAAGTGGAAAATATGAAAAGACCACACAGGCCCAGCAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR CAA 72 bp CTGCTGGGCCTGTGTGGTCTTTTCATATTTTCCACTTaGCAGCGCTGCGCTCCCAAGCTAATCCCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: LLGLCGLFIFST*QRCAPKLIPSC
Trigger: GCAGCTTGGGATTAGCTTGGGAGCGCAGCGCTGCAAAGTGGAAAATATGAAAAGACCACACAGGCCCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR CAA 72 bp GTGAGCCCAGGCTGGATCCTGAGCCTAATTCCATTCTaGGCATGCTGTCTGCTCCTAGGGCAAGTCACTTCA +
Preference number: 4 (lower is better)
Translates to: VSPGWILSLIPF*ACCLLLGQVTS
Trigger: TGAAGTGACTTGCCCTAGGAGCAGACAGCATGCCAAGAATGGAATTAGGCTCAGGATCCAGCCTGGGCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp CAGCCTTCCATCCTTATCTTACGCCTTAGACACATGGTTCTCACAGCCATCTCAGCTGGGATGCGGGTTTaGTTCTGTGCTGCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: QPSILILRLRHMVLTAISAGMRV*FCAAGH
Trigger: GTGGCCAGCAGCACAGAATCAAACCCGCATCCCAGC...TGAGATGGCTGTGAGAACCATGTGTCTAAGGCGTAAGATAAGGATGGAAGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp TCCAAATCAGAAGGAAACGTGACATGGAGTCCCAGGCTCATGCCCTCCGCCAGACATATAGAAGGTCCCTaGCCTCCCGGAAGGTTGAAT +
Preference number: 4 (lower is better)
Translates to: SKSEGNVTWSPRLMPSARHIEGP*PPGRLN
Trigger: ATTCAACCTTCCGGGAGGTCAGGGACCTTCTATATG...TCTGGCGGAGGGCATGAGCCTGGGACTCCATGTCACGTTTCCTTCTGATTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp TCCCGGAGGAGCTGTGAGTTTCTCCCCCAACTGAGTAGAGGAAACAGAGGGGAAACCATTCAAGCAGACTaGGACCCACTCGCCTCATAT +
Preference number: 4 (lower is better)
Translates to: SRRSCEFLPQLSRGNRGETIQAD*DPLASY
Trigger: ATATGAGGCGAGTGGGTCTCAGTCTGCTTGAATGGT...TTCCCCTCTGTTTCCTCTACTCAGTTGGGGGAGAAACTCACAGCTCCTCCGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp AGGAAACGTGACATGGAGTCCCAGGCTCATGCCCTCCGCCAGAATTCCAGCCCCTCTTCTTCAAGTGGCTaGAGGTATCATCCTAAGTCT +
Preference number: 4 (lower is better)
Translates to: RKRDMESQAHALRQNSSPSSSSG*RYHPKS
Trigger: AGACTTAGGATGATACCTTCAGCCACTTGAAGAAGA...GGGGCTGGAATTCTGGCGGAGGGCATGAGCCTGGGACTCCATGTCACGTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR GCA 90 bp GACTGCTGGGCCTGTGTGGTCTTTTCATATTTTCCACTTTGCAGCGCTGCGCTCTTGAAATCCACGGAGTaGCGGGGGTTCAGGATCAGA +
Preference number: 4 (lower is better)
Translates to: DCWACVVFSYFPLCSAALLKSTE*RGFRIR
Trigger: TCTGATCCTGAACCCCCGGCACTCCGTGGATTTCAA...GAGCGCAGCGCTGCAAAGTGGAAAATATGAAAAGACCACACAGGCCCAGCAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR GCA 90 bp AGAGATTCCAAATCAGAAGGAAACGTGACATGGAGTCCCAGGCTCATGCCCTCCTCCACTTTGCAGCGCTaGGCTCCCAAGCTAATCCCA +
Preference number: 4 (lower is better)
Translates to: RDSKSEGNVTWSPRLMPSSTLQR*APKLIP
Trigger: TGGGATTAGCTTGGGAGCGCAGCGCTGCAAAGTGGA...GGAGGGCATGAGCCTGGGACTCCATGTCACGTTTCCTTCTGATTTGGAATCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR GCA 90 bp ATGCCCTCCGCCAGAATTCCAGCCCCGCCTGTGCTGGGTAGTTTGTCTAAGGTGAGGGAAAATTCCTCTTaGCTGTGTGACCCAAACTCT +
Preference number: 4 (lower is better)
Translates to: MPSARIPAPPVLGSLSKVRENSS*LCDPNS
Trigger: AGAGTTTGGGTCACACAGGCAAGAGGAATTTTCCCT...CACCTTAGACAAACTACCCAGCACAGGCGGGGCTGGAATTCTGGCGGAGGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR GCA 90 bp AGGTTGAATGGTGGGGCGCCTGTGACAGTAGGAGTGGGCTGGCTATGCCCGTGTTTGGGCAAAGAAAACTaGCCCTTTTTCTTGGTGTGT +
Preference number: 4 (lower is better)
Translates to: RLNGGAPVTVGVGWLCPCLGKEN*PFFLVC
Trigger: ACACACCAAGAAAAAGGGGCAGTTTTCTTTGCCCAA...ACACGGGCATAGCCAGCCCACTCCTACTGTCACAGGCGCCCCACCATTCAACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR GCA 90 bp AGGAAACGTGACATGGAGTCCCAGGCTCATGCCCTCCGCCAGAATTCCAGCCCCCTAACTAGCACCAAATaGTTGGGCAAAGAAAACTGC +
Preference number: 4 (lower is better)
Translates to: RKRDMESQAHALRQNSSPLTSTK*LGKENC
Trigger: GCAGTTTTCTTTGCCCAAGCATTTGGTGCTAGTTAG...GGGGCTGGAATTCTGGCGGAGGGCATGAGCCTGGGACTCCATGTCACGTTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp TCCCGGAGGAGCTGTGAGTTTCTCCCCCAACTGAGTAGAGGAAACAGAGGGGAACACTGGAACATGAAGTaGCGTCGAGGAAGCGTAACT +
Preference number: 4 (lower is better)
Translates to: SRRSCEFLPQLSRGNRGEHWNMK*RRGSVT
Trigger: AGTTACGCTTCCTCGACGCCACTTCATGTTCCAGTG...TTCCCCTCTGTTTCCTCTACTCAGTTGGGGGAGAAACTCACAGCTCCTCCGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp ATGCCCTCCGCCAGAATTCCAGCCCCGCCTGTGCTGGGTAGTTTGTCTAAGGTGAAACTGACCACAAGATaGCCTTTGGAATGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: MPSARIPAPPVLGSLSKVKLTTR*PLEWSR
Trigger: TCTGCTCCATTCCAAAGGCCATCTTGTGGTCAGTTT...CACCTTAGACAAACTACCCAGCACAGGCGGGGCTGGAATTCTGGCGGAGGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp TCCCGGAGGAGCTGTGAGTTTCTCCCCCAACTGAGTAGAGGAAACAGAGGGGAAGCGTTCAGGAAGGTTTaGATTTTGGGGCATTTGGGG +
Preference number: 4 (lower is better)
Translates to: SRRSCEFLPQLSRGNRGEAFRKV*ILGHLG
Trigger: CCCCAAATGCCCCAAAATCCAAACCTTCCTGAACGC...TTCCCCTCTGTTTCCTCTACTCAGTTGGGGGAGAAACTCACAGCTCCTCCGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp ATGCCCTCCGCCAGAATTCCAGCCCCGCCTGTGCTGGGTAGTTTGTCTAAGGTGCTAGGCAGTGAAAGGTaGGAATGGTGGTTACTTCAT +
Preference number: 4 (lower is better)
Translates to: MPSARIPAPPVLGSLSKVLGSER*EWWLLH
Trigger: ATGAAGTAACCACCATTCCCACCTTTCACTGCCTAG...CACCTTAGACAAACTACCCAGCACAGGCGGGGCTGGAATTCTGGCGGAGGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp GTGGAGATACGGGTGCTGGGGCTTTATCTCATCTCCTGTAATGAGGGACGTTTCAACTGGGAAGAACAGTaGAGATACGGGTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: VEIRVLGLYLISCNEGRFNWEEQ*RYGCWG
Trigger: GCCCCAGCACCCGTATCTCCACTGTTCTTCCCAGTT...GAAACGTCCCTCATTACAGGAGATGAGATAAAGCCCCAGCACCCGTATCTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545027.1
CDS-3UTR TCA 90 bp TCCAAATCAGAAGGAAACGTGACATGGAGTCCCAGGCTCATGCCCTCCGCCAGATGCTTAATGCTACACTaGGCAGGAGTCTCAGACATG +
Preference number: 4 (lower is better)
Translates to: SKSEGNVTWSPRLMPSARCLMLH*AGVSDM
Trigger: CATGTCTGAGACTCCTGCTCAGTGTAGCATTAAGCA...TCTGGCGGAGGGCATGAGCCTGGGACTCCATGTCACGTTTCCTTCTGATTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp AGGAAACGTGACATGGAGTCCCAGGCTCATGCCCTCCGCCAGAATTCCAGCCCCCTCTGGAGGTGTATATaGAATTCGTTCCTGCTTAAT +
Preference number: 4 (lower is better)
Translates to: RKRDMESQAHALRQNSSPLWRCI*NSFLLN
Trigger: ATTAAGCAGGAACGAATTTCATATACACCTCCAGAG...GGGGCTGGAATTCTGGCGGAGGGCATGAGCCTGGGACTCCATGTCACGTTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp TTACGCCTTAGACACATGGTTCTCACAGCCATCTCAGGGGCGGCTCTCTGGACTATAGAGCACATCACCTaGATGAGGAGATCGATAGCG +
Preference number: 4 (lower is better)
Translates to: LRLRHMVLTAISGAALWTIEHIT*MRRSIA
Trigger: CGCTATCGATCTCCTCATTCAGGTGATGTGCTCTAT...AGTCCAGAGAGCCGCCCCTGAGATGGCTGTGAGAACCATGTGTCTAAGGCGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp CATGTATCTGTCTGCAGCACAGCAGCATCTGTGATGATTTTGGCCTCCCTCAGACCCGATGAGAGAGGTTaGTGGGCTTCCCTTCCCTAT +
Preference number: 4 (lower is better)
Translates to: HVSVCSTAASVMILASLRPDERG*WASLPY
Trigger: ATAGGGAAGGGAAGCCCATCAACCTCTCTCATCGGG...TCTGAGGGAGGCCAAAATCATCACAGATGCTGCTGTGCTGCAGACAGATACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp AGAGATTCCAAATCAGAAGGAAACGTGACATGGAGTCCCAGGCTCATGCCCTCCTGTCCTCCCATCGGATaGAGTTTTCGTACCGGCTGT +
Preference number: 4 (lower is better)
Translates to: RDSKSEGNVTWSPRLMPSCPPIG*SFRTGC
Trigger: ACAGCCGGTACGAAAACTTCATCCGATGGGAGGACA...GGAGGGCATGAGCCTGGGACTCCATGTCACGTTTCCTTCTGATTTGGAATCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp TCCCGGAGGAGCTGTGAGTTTCTCCCCCAACTGAGTAGAGGAAACAGAGGGGAACTGTTCGGCCACTCATaGTTTCATCTGGGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: SRRSCEFLPQLSRGNRGELFGHS*FHLGFS
Trigger: TGAAAACCCCAGATGAAATCATGAGTGGCCGAACAG...TTCCCCTCTGTTTCCTCTACTCAGTTGGGGGAGAAACTCACAGCTCCTCCGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp AGAGATTCCAAATCAGAAGGAAACGTGACATGGAGTCCCAGGCTCATGCCCTCCGACTCTCCAAGAGGCTaGACTCTGTCAGAAGGCATC +
Preference number: 4 (lower is better)
Translates to: RDSKSEGNVTWSPRLMPSDSPRG*TLSEGI
Trigger: GATGCCTTCTGACAGAGTTCAGCCTCTTGGAGAGTC...GGAGGGCATGAGCCTGGGACTCCATGTCACGTTTCCTTCTGATTTGGAATCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR GCA 90 bp GTGGAGATACGGGTGCTGGGGCTTTATCTCATCTCCTGTAATGAGGGACGTTTCGGGCTACGTCATCCCTaGTCCAGTAAATTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: VEIRVLGLYLISCNEGRFGLRHP*SSKLAA
Trigger: TGCAGCCAATTTACTGGAGCAGGGATGACGTAGCCC...GAAACGTCCCTCATTACAGGAGATGAGATAAAGCCCCAGCACCCGTATCTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545027.1
CDS-3UTR GCA 90 bp CATGTATCTGTCTGCAGCACAGCAGCATCTGTGATGATTTTGGCCTCCCTCAGATTCCAGCCCCGCCTGTaGTGGGTAGTTTGTCTAAGG +
Preference number: 4 (lower is better)
Translates to: HVSVCSTAASVMILASLRFQPRL*WVVCLR
Trigger: CCTTAGACAAACTACCCAGCACAGGCGGGGCTGGAA...TCTGAGGGAGGCCAAAATCATCACAGATGCTGCTGTGCTGCAGACAGATACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR GCA 90 bp GTCACGCCGGGTGGATTAGGCAGGTACAATATAAACTCTGAAAGCAGGGATTATGGAGTCCCAGGCTCATaGCCTCCGCCAGAATTCCAG +
Preference number: 4 (lower is better)
Translates to: VTPGGLGRYNINSESRDYGVPGS*PPPEFQ
Trigger: CTGGAATTCTGGCGGAGGGCATGAGCCTGGGACTCC...ATAATCCCTGCTTTCAGAGTTTATATTGTACCTGCCTAATCCACCCGGCGTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp GAGGGACGTTTCCTCATGACGGTTAGTTTATTAACTTCTGGCAGGTCTCCAGGAGAGCGCTCGAGGCACTaGAACATGAAGTGGCGTCGA +
Preference number: 4 (lower is better)
Translates to: EGRFLMTVSLLTSGRSPGERSRH*NMKWRR
Trigger: TCGACGCCACTTCATGTTCCAGTGCCTCGAGCGCTC...TCCTGGAGACCTGCCAGAAGTTAATAAACTAACCGTCATGAGGAAACGTCCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545027.1
CDS-3UTR CCA 90 bp TGCTGGGTAGTTTGTCTAAGGTGCTCCAGGGTCCCTCTTGGTCTGCAAGAGAAGAGCGAAAGTCCTCTTTaGTCAGCAGCAGGAGAGCTT +
Preference number: 4 (lower is better)
Translates to: CWVVCLRCSRVPLGLQEKSESPL*SAAGEL
Trigger: AAGCTCTCCTGCTGCTGACCAAAGAGGACTTTCGCT...CTTCTCTTGCAGACCAAGAGGGACCCTGGAGCACCTTAGACAAACTACCCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp ATCTTACGCCTTAGACACATGGTTCTCACAGCCATCTCAGGGGCGGCTCTCTGGGCTGAGGTGGACTGTTaGTTCCTTCAGCATTCATCT +
Preference number: 4 (lower is better)
Translates to: ILRLRHMVLTAISGAALWAEVDC*FLQHSS
Trigger: AGATGAATGCTGAAGGAACCAACAGTCCACCTCAGC...CCAGAGAGCCGCCCCTGAGATGGCTGTGAGAACCATGTGTCTAAGGCGTAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp GACTGCTGGGCCTGTGTGGTCTTTTCATATTTTCCACTTTGCAGCGCTGCGCTCCAGTTTCTGGACTGCTaGGCCTGTGTGGTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: DCWACVVFSYFPLCSAALQFLDC*ACVVFS
Trigger: TGAAAAGACCACACAGGCCCAGCAGTCCAGAAACTG...GAGCGCAGCGCTGCAAAGTGGAAAATATGAAAAGACCACACAGGCCCAGCAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp AGGAAACGTGACATGGAGTCCCAGGCTCATGCCCTCCGCCAGAATTCCAGCCCCCTCTGTTACCTGCTTTaGAAAAATAAATCCCCACTG +
Preference number: 4 (lower is better)
Translates to: RKRDMESQAHALRQNSSPLCYLL*KNKSPL
Trigger: CAGTGGGGATTTATTTTTCCAAAGCAGGTAACAGAG...GGGGCTGGAATTCTGGCGGAGGGCATGAGCCTGGGACTCCATGTCACGTTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp TTACGCCTTAGACACATGGTTCTCACAGCCATCTCAGGGGCGGCTCTCTGGACTAGATGGCCTTTGGAATaGAGCAGAGAGGAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: LRLRHMVLTAISGAALWTRWPLE*SREELF
Trigger: GAAAAGCTCCTCTCTGCTCCATTCCAAAGGCCATCT...AGTCCAGAGAGCCGCCCCTGAGATGGCTGTGAGAACCATGTGTCTAAGGCGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp AGGTTGAATGGTGGGGCGCCTGTGACAGTAGGAGTGGGCTGGCTATGCCCGTGTAGTGAAAGGTGGGAATaGTGGTTACTTCATCATTTC +
Preference number: 4 (lower is better)
Translates to: RLNGGAPVTVGVGWLCPCSERWE*WLLHHF
Trigger: GAAATGATGAAGTAACCACCATTCCCACCTTTCACT...ACACGGGCATAGCCAGCCCACTCCTACTGTCACAGGCGCCCCACCATTCAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp TCCAAATCAGAAGGAAACGTGACATGGAGTCCCAGGCTCATGCCCTCCGCCAGAATTCTAGAGTCGTTCTaGTTTGCAGGTGGTTGCGGT +
Preference number: 4 (lower is better)
Translates to: SKSEGNVTWSPRLMPSARILESF*FAGGCG
Trigger: ACCGCAACCACCTGCAAACCAGAACGACTCTAGAAT...TCTGGCGGAGGGCATGAGCCTGGGACTCCATGTCACGTTTCCTTCTGATTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp CATGTATCTGTCTGCAGCACAGCAGCATCTGTGATGATTTTGGCCTCCCTCAGAATTTGTCGTGATAGGTaGCCTGGAGCGGTGCAACAG +
Preference number: 4 (lower is better)
Translates to: HVSVCSTAASVMILASLRICRDR*PGAVQQ
Trigger: CTGTTGCACCGCTCCAGGTCACCTATCACGACAAAT...TCTGAGGGAGGCCAAAATCATCACAGATGCTGCTGTGCTGCAGACAGATACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp CATGTATCTGTCTGCAGCACAGCAGCATCTGTGATGATTTTGGCCTCCCTCAGAAAGCACCCGGGTCACTaGTTCTGTTTAGGTGCCAAC +
Preference number: 4 (lower is better)
Translates to: HVSVCSTAASVMILASLRKHPGH*FCLGAN
Trigger: GTTGGCACCTAAACAGAATCAGTGACCCGGGTGCTT...TCTGAGGGAGGCCAAAATCATCACAGATGCTGCTGTGCTGCAGACAGATACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp CATGTATCTGTCTGCAGCACAGCAGCATCTGTGATGATTTTGGCCTCCCTCAGAAGTTTCTCCCCCAACTaGGTAGAGGAAACAGAGGGG +
Preference number: 4 (lower is better)
Translates to: HVSVCSTAASVMILASLRSFSPN*VEETEG
Trigger: CCCCTCTGTTTCCTCTACTCAGTTGGGGGAGAAACT...TCTGAGGGAGGCCAAAATCATCACAGATGCTGCTGTGCTGCAGACAGATACATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp TGCTGGGTAGTTTGTCTAAGGTGCTCCAGGGTCCCTCTTGGTCTGCAAGAGAAGTTCCTCTTGCCTGTGTaGCCCAAACTCTACATGTCT +
Preference number: 4 (lower is better)
Translates to: CWVVCLRCSRVPLGLQEKFLLPV*PKLYMS
Trigger: AGACATGTAGAGTTTGGGTCACACAGGCAAGAGGAA...CTTCTCTTGCAGACCAAGAGGGACCCTGGAGCACCTTAGACAAACTACCCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp TCCCGGAGGAGCTGTGAGTTTCTCCCCCAACTGAGTAGAGGAAACAGAGGGGAAAGTCATCTTAGAGGCTaGAATAGGGATCACCATGTC +
Preference number: 4 (lower is better)
Translates to: SRRSCEFLPQLSRGNRGESHLRG*NRDHHV
Trigger: GACATGGTGATCCCTATTTCAGCCTCTAAGATGACT...TTCCCCTCTGTTTCCTCTACTCAGTTGGGGGAGAAACTCACAGCTCCTCCGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp ATGCCCTCCGCCAGAATTCCAGCCCCGCCTGTGCTGGGTAGTTTGTCTAAGGTGATTGTCACAGCCATTTaGATTTCAGCTAAAGCGACA +
Preference number: 4 (lower is better)
Translates to: MPSARIPAPPVLGSLSKVIVTAI*ISAKAT
Trigger: TGTCGCTTTAGCTGAAATTCAAATGGCTGTGACAAT...CACCTTAGACAAACTACCCAGCACAGGCGGGGCTGGAATTCTGGCGGAGGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp TGGAGATACGGGTGCTGGGGCTTTATCTCATCTCCTGTAATGAGGGACGTTTCCATCAGAGTCGAGGTCTaGATGAGGAGATCGATAGCG +
Preference number: 4 (lower is better)
Translates to: WRYGCWGFISSPVMRDVSIRVEV*MRRSIA
Trigger: CGCTATCGATCTCCTCATTCAGACCTCGACTCTGAT...GGAAACGTCCCTCATTACAGGAGATGAGATAAAGCCCCAGCACCCGTATCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545027.1
CDS-3UTR GCA 90 bp TCCCGGAGGAGCTGTGAGTTTCTCCCCCAACTGAGTAGAGGAAACAGAGGGGAAGCAGCAGGAGAGCTTTaGCATTCATTTCAAACGTGT +
Preference number: 4 (lower is better)
Translates to: SRRSCEFLPQLSRGNRGEAAGEL*HSFQTC
Trigger: ACACGTTTGAAATGAATGGCAAAGCTCTCCTGCTGC...TTCCCCTCTGTTTCCTCTACTCAGTTGGGGGAGAAACTCACAGCTCCTCCGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR GCA 90 bp GTCACGCCGGGTGGATTAGGCAGGTACAATATAAACTCTGAAAGCAGGGATTATGGGTCCCTCTTGGTCTaGAAGAGAAGTGTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: VTPGGLGRYNINSESRDYGSLLV*KRSVPA
Trigger: GGCAGGGACACTTCTCTTGCAGACCAAGAGGGACCC...ATAATCCCTGCTTTCAGAGTTTATATTGTACCTGCCTAATCCACCCGGCGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR GCA 90 bp CAGCCTTCCATCCTTATCTTACGCCTTAGACACATGGTTCTCACAGCCATCTCAGGTTTGATTCTGTGCTaGTGGCCACAAAGCACCCGG +
Preference number: 4 (lower is better)
Translates to: QPSILILRLRHMVLTAISGLILC*WPQSTR
Trigger: CCGGGTGCTTTGTGGCCAGCAGCACAGAATCAAACC...TGAGATGGCTGTGAGAACCATGTGTCTAAGGCGTAAGATAAGGATGGAAGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR GCA 90 bp TTCAGCCAAGACCCAACAGTAACAGGAACAGACCTGATCCACGTGGCAGGAAAAAGATGGGTGGCCCAATaGTGGGATGCGGGTTTGATT +
Preference number: 4 (lower is better)
Translates to: FSQDPTVTGTDLIHVAGKRWVAQ*WDAGLI
Trigger: AATCAAACCCGCATCCCAGCATTGGGCCACCCATCT...TTTTCCTGCCACGTGGATCAGGTCTGTTCCTGTTACTGTTGGGTCTTGGCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR GCA 90 bp TTCAGCCAAGACCCAACAGTAACAGGAACAGACCTGATCCACGTGGCAGGAAAACTCTCAAAAGACACCTaGAGCGTGCTGAGATCCAGC +
Preference number: 4 (lower is better)
Translates to: FSQDPTVTGTDLIHVAGKLSKDT*SVLRSS
Trigger: GCTGGATCTCAGCACGCTGCAGGTGTCTTTTGAGAG...TTTTCCTGCCACGTGGATCAGGTCTGTTCCTGTTACTGTTGGGTCTTGGCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp TGGAGATACGGGTGCTGGGGCTTTATCTCATCTCCTGTAATGAGGGACGTTTCCAGCGAAAGTCCTCTTTaGTCAGCAGCAGGAGAGCTT +
Preference number: 4 (lower is better)
Translates to: WRYGCWGFISSPVMRDVSSESPL*SAAGEL
Trigger: AAGCTCTCCTGCTGCTGACCAAAGAGGACTTTCGCT...GGAAACGTCCCTCATTACAGGAGATGAGATAAAGCCCCAGCACCCGTATCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545027.1
CDS-3UTR CCA 90 bp TTCAGCCAAGACCCAACAGTAACAGGAACAGACCTGATCCACGTGGCAGGAAAATTTTTGCCCAGTTTCTaGACTGCTGGGCCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: FSQDPTVTGTDLIHVAGKFLPSF*TAGPVW
Trigger: CCACACAGGCCCAGCAGTCCAGAAACTGGGCAAAAA...TTTTCCTGCCACGTGGATCAGGTCTGTTCCTGTTACTGTTGGGTCTTGGCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp GTCACGCCGGGTGGATTAGGCAGGTACAATATAAACTCTGAAAGCAGGGATTATCGGAAGGTTGAATGGTaGGGCGCCTGTGACAGTAGG +
Preference number: 4 (lower is better)
Translates to: VTPGGLGRYNINSESRDYRKVEW*GACDSR
Trigger: CCTACTGTCACAGGCGCCCCACCATTCAACCTTCCG...ATAATCCCTGCTTTCAGAGTTTATATTGTACCTGCCTAATCCACCCGGCGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp AGGAAACGTGACATGGAGTCCCAGGCTCATGCCCTCCGCCAGAATTCCAGCCCCAAATATAGAAATGCTTaGGGCAAAAGGGAATTTCCC +
Preference number: 4 (lower is better)
Translates to: RKRDMESQAHALRQNSSPKYRNA*GKREFP
Trigger: GGGAAATTCCCTTTTGCCCCAAGCATTTCTATATTT...GGGGCTGGAATTCTGGCGGAGGGCATGAGCCTGGGACTCCATGTCACGTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp TCCAAATCAGAAGGAAACGTGACATGGAGTCCCAGGCTCATGCCCTCCGCCAGAATTCCTCTTTTTCTGTaGGGATACCCTCATCTCCCT +
Preference number: 4 (lower is better)
Translates to: SKSEGNVTWSPRLMPSARIPLFL*GYPHLP
Trigger: AGGGAGATGAGGGTATCCCCACAGAAAAAGAGGAAT...TCTGGCGGAGGGCATGAGCCTGGGACTCCATGTCACGTTTCCTTCTGATTTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp TTACGCCTTAGACACATGGTTCTCACAGCCATCTCAGGGGCGGCTCTCTGGACTTTATCTTCAGTTTCCTaGGTGGGAATGAGCCACACA +
Preference number: 4 (lower is better)
Translates to: LRLRHMVLTAISGAALWTLSSVS*VGMSHT
Trigger: TGTGTGGCTCATTCCCACCCAGGAAACTGAAGATAA...AGTCCAGAGAGCCGCCCCTGAGATGGCTGTGAGAACCATGTGTCTAAGGCGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp CTGGGGCTTTATCTCATCTCCTGTAATGAGGGACGTTTCCTCATGACGGTTAGTCATTTTCAGCCCACTTaGGCCACTGGGCTACGTCAT +
Preference number: 4 (lower is better)
Translates to: LGLYLISCNEGRFLMTVSHFQPT*ATGLRH
Trigger: ATGACGTAGCCCAGTGGCTCAAGTGGGCTGAAAATG...ACTAACCGTCATGAGGAAACGTCCCTCATTACAGGAGATGAGATAAAGCCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545027.1
CDS-3UTR TCA 90 bp TCCCGGAGGAGCTGTGAGTTTCTCCCCCAACTGAGTAGAGGAAACAGAGGGGAACAAATGGGTCCTTTCTaGGACACAGCTATGAAAGAA +
Preference number: 4 (lower is better)
Translates to: SRRSCEFLPQLSRGNRGEQMGPF*DTAMKE
Trigger: TTCTTTCATAGCTGTGTCTCAGAAAGGACCCATTTG...TTCCCCTCTGTTTCCTCTACTCAGTTGGGGGAGAAACTCACAGCTCCTCCGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp GACTGCTGGGCCTGTGTGGTCTTTTCATATTTTCCACTTTGCAGCGCTGCGCTCATCACCATGTCCTACTaGATGCTCTCAAAAGACACC +
Preference number: 4 (lower is better)
Translates to: DCWACVVFSYFPLCSAALITMSY*MLSKDT
Trigger: GGTGTCTTTTGAGAGCATTCAGTAGGACATGGTGAT...GAGCGCAGCGCTGCAAAGTGGAAAATATGAAAAGACCACACAGGCCCAGCAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp CAGCCTTCCATCCTTATCTTACGCCTTAGACACATGGTTCTCACAGCCATCTCAAGCGTAACTCGGCACTaGGCTCTCTGGAGGTGTATA +
Preference number: 4 (lower is better)
Translates to: QPSILILRLRHMVLTAISSVTRH*ALWRCI
Trigger: TATACACCTCCAGAGAGCCCAGTGCCGAGTTACGCT...TGAGATGGCTGTGAGAACCATGTGTCTAAGGCGTAAGATAAGGATGGAAGGCTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp GACTGCTGGGCCTGTGTGGTCTTTTCATATTTTCCACTTTGCAGCGCTGCGCTCAGTGATTATTCTCCATaGGAGACACTGACAGAGGGT +
Preference number: 4 (lower is better)
Translates to: DCWACVVFSYFPLCSAALSDYSP*ETLTEG
Trigger: ACCCTCTGTCAGTGTCTCCCATGGAGAATAATCACT...GAGCGCAGCGCTGCAAAGTGGAAAATATGAAAAGACCACACAGGCCCAGCAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp GTCACGCCGGGTGGATTAGGCAGGTACAATATAAACTCTGAAAGCAGGGATTATTGGGTGGCCCAATGCTaGGATGCGGGTTTGATTCTG +
Preference number: 4 (lower is better)
Translates to: VTPGGLGRYNINSESRDYWVAQC*DAGLIL
Trigger: CAGAATCAAACCCGCATCCCAGCATTGGGCCACCCA...ATAATCCCTGCTTTCAGAGTTTATATTGTACCTGCCTAATCCACCCGGCGTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp CAGCCTTCCATCCTTATCTTACGCCTTAGACACATGGTTCTCACAGCCATCTCACCACAAGATGGCCTTTaGAATGGAGCAGAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: QPSILILRLRHMVLTAISPQDGL*NGAERS
Trigger: GCTCCTCTCTGCTCCATTCCAAAGGCCATCTTGTGG...TGAGATGGCTGTGAGAACCATGTGTCTAAGGCGTAAGATAAGGATGGAAGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp TTACGCCTTAGACACATGGTTCTCACAGCCATCTCAGGGGCGGCTCTCTGGACTAAAAAGAGCCACAAATaGGTCCTTTCTGAGACACAG +
Preference number: 4 (lower is better)
Translates to: LRLRHMVLTAISGAALWTKKSHK*VLSETQ
Trigger: CTGTGTCTCAGAAAGGACCCATTTGTGGCTCTTTTT...AGTCCAGAGAGCCGCCCCTGAGATGGCTGTGAGAACCATGTGTCTAAGGCGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR CAA 72 bp GGGTCCCTCAGTGTCCAGCAGGTGCTTCATCAAGGTTaGCTAACTGAATCTGAAATCTTTAGGGTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GSLSVQQVLHQG*LTESEIFRVCR
Trigger: CCTGCAGACCCTAAAGATTTCAGATTCAGTTAGCAAACCTTGATGAAGCACCTGCTGGACACTGAGGGACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp TCCAAATCAGAAGGAAACGTGACATGGAGTCCCAGGCTCATGCCCTCCGCCAGACCATCGATCTTATTTTaGGGTGAAAAAGAGCCACAA +
Preference number: 4 (lower is better)
Translates to: SKSEGNVTWSPRLMPSARPSILF*GEKEPQ
Trigger: TTGTGGCTCTTTTTCACCTCAAAATAAGATCGATGG...TCTGGCGGAGGGCATGAGCCTGGGACTCCATGTCACGTTTCCTTCTGATTTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR GCA 90 bp GTCACGCCGGGTGGATTAGGCAGGTACAATATAAACTCTGAAAGCAGGGATTATCAAGAGAAGTGTCCCTaGCATTTCTGGGTCGCTTCC +
Preference number: 4 (lower is better)
Translates to: VTPGGLGRYNINSESRDYQEKCP*HFWVAS
Trigger: GGAAGCGACCCAGAAATGGCAGGGACACTTCTCTTG...ATAATCCCTGCTTTCAGAGTTTATATTGTACCTGCCTAATCCACCCGGCGTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR GCA 90 bp TGCTGGGTAGTTTGTCTAAGGTGCTCCAGGGTCCCTCTTGGTCTGCAAGAGAAGATCCCTTATCTGAAATaGTTGGGACCAGAAGTGTTC +
Preference number: 4 (lower is better)
Translates to: CWVVCLRCSRVPLGLQEKIPYLK*LGPEVF
Trigger: GAACACTTCTGGTCCCAAGCATTTCAGATAAGGGAT...CTTCTCTTGCAGACCAAGAGGGACCCTGGAGCACCTTAGACAAACTACCCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR GCA 90 bp CTGGGGCTTTATCTCATCTCCTGTAATGAGGGACGTTTCCTCATGACGGTTAGTCAGTGGAGATACGGGTaGTGGGGCTTTATCTCATCT +
Preference number: 4 (lower is better)
Translates to: LGLYLISCNEGRFLMTVSQWRYG*WGFISS
Trigger: AGATGAGATAAAGCCCCAGCACCCGTATCTCCACTG...ACTAACCGTCATGAGGAAACGTCCCTCATTACAGGAGATGAGATAAAGCCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545027.1
CDS-3UTR CCA 90 bp GTCACGCCGGGTGGATTAGGCAGGTACAATATAAACTCTGAAAGCAGGGATTATGGACTCGGAGGACGCTaGGCAGTGATTATTCTCCAT +
Preference number: 4 (lower is better)
Translates to: VTPGGLGRYNINSESRDYGLGGR*AVIILH
Trigger: ATGGAGAATAATCACTGCCCAGCGTCCTCCGAGTCC...ATAATCCCTGCTTTCAGAGTTTATATTGTACCTGCCTAATCCACCCGGCGTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp GTCACGCCGGGTGGATTAGGCAGGTACAATATAAACTCTGAAAGCAGGGATTATGTCGAGCCAGTCCGTTaGGATCCACTATCCGGAATA +
Preference number: 4 (lower is better)
Translates to: VTPGGLGRYNINSESRDYVEPVR*DPLSGI
Trigger: TATTCCGGATAGTGGATCCCAACGGACTGGCTCGAC...ATAATCCCTGCTTTCAGAGTTTATATTGTACCTGCCTAATCCACCCGGCGTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp TTCAGCCAAGACCCAACAGTAACAGGAACAGACCTGATCCACGTGGCAGGAAAATACGCCTTAGACACATaGTTCTCACAGCCATCTCAG +
Preference number: 4 (lower is better)
Translates to: FSQDPTVTGTDLIHVAGKYALDT*FSQPSQ
Trigger: CTGAGATGGCTGTGAGAACCATGTGTCTAAGGCGTA...TTTTCCTGCCACGTGGATCAGGTCTGTTCCTGTTACTGTTGGGTCTTGGCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp TGCTGGGTAGTTTGTCTAAGGTGCTCCAGGGTCCCTCTTGGTCTGCAAGAGAAGGCCTTCCAAATAACTTaGACAGCCTTCCATCCTTAT +
Preference number: 4 (lower is better)
Translates to: CWVVCLRCSRVPLGLQEKAFQIT*TAFHPY
Trigger: ATAAGGATGGAAGGCTGTCCAAGTTATTTGGAAGGC...CTTCTCTTGCAGACCAAGAGGGACCCTGGAGCACCTTAGACAAACTACCCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp GTCACGCCGGGTGGATTAGGCAGGTACAATATAAACTCTGAAAGCAGGGATTATACTGTATCCAGGTGCTaGCACTACCCGGGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: VTPGGLGRYNINSESRDYTVSRC*HYPGFL
Trigger: GAGAAAACCCGGGTAGTGCCAGCACCTGGATACAGT...ATAATCCCTGCTTTCAGAGTTTATATTGTACCTGCCTAATCCACCCGGCGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp TGCTGGGTAGTTTGTCTAAGGTGCTCCAGGGTCCCTCTTGGTCTGCAAGAGAAGAAATGTATTCAGACTTaGAGCCTAGGCAGTGAAAGG +
Preference number: 4 (lower is better)
Translates to: CWVVCLRCSRVPLGLQEKKCIQT*SLGSER
Trigger: CCTTTCACTGCCTAGGCTCCAAGTCTGAATACATTT...CTTCTCTTGCAGACCAAGAGGGACCCTGGAGCACCTTAGACAAACTACCCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp CTGGGGCTTTATCTCATCTCCTGTAATGAGGGACGTTTCCTCATGACGGTTAGTACGGTCTGTGGCAACTaGGAAGAACAGTGGAGATAC +
Preference number: 4 (lower is better)
Translates to: LGLYLISCNEGRFLMTVSTVCGN*EEQWRY
Trigger: GTATCTCCACTGTTCTTCCCAGTTGCCACAGACCGT...ACTAACCGTCATGAGGAAACGTCCCTCATTACAGGAGATGAGATAAAGCCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545027.1
3UTR CAA 72 bp AAGCTAATCCCAAGCTGCCGAGGCCTTCCAAATAACTaGGACAGCCTTCCATCCTTATCTTACGCCTTAGAC +
Preference number: 4 (lower is better)
Translates to: KLIPSCRGLPNN*DSLPSLSYALD
Trigger: GTCTAAGGCGTAAGATAAGGATGGAAGGCTGTCCAAGTTATTTGGAAGGCCTCGGCAGCTTGGGATTAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp CGCCTTCTATTTCTTCTTCAAGTGGCTGAAGGTATCATCCTAAGTCTAACATATCGAGGCACTGGAACATaGAGTGGCGTCGAGGAAGCG +
Preference number: 4 (lower is better)
Translates to: RLLFLLQVAEGIILSLTYRGTGT*SGVEEA
Trigger: CGCTTCCTCGACGCCACTTCATGTTCCAGTGCCTCG...ATATGTTAGACTTAGGATGATACCTTCAGCCACTTGAAGAAGAAATAGAAGGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp CAGCCTTCCATCCTTATCTTACGCCTTAGACACATGGTTCTCACAGCCATCTCAGGAAAAAGAGGAACCTaGACCCCTCTGCAAGTATTC +
Preference number: 4 (lower is better)
Translates to: QPSILILRLRHMVLTAISGKRGT*TPLQVF
Trigger: GAATACTTGCAGAGGGGTTCAGGTTCCTCTTTTTCC...TGAGATGGCTGTGAGAACCATGTGTCTAAGGCGTAAGATAAGGATGGAAGGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp TTCAGCCAAGACCCAACAGTAACAGGAACAGACCTGATCCACGTGGCAGGAAAATACTTAGTGTTGAAATaGGTCACGCCGGGTGGATTA +
Preference number: 4 (lower is better)
Translates to: FSQDPTVTGTDLIHVAGKYLVLK*VTPGGL
Trigger: TAATCCACCCGGCGTGACTCATTTCAACACTAAGTA...TTTTCCTGCCACGTGGATCAGGTCTGTTCCTGTTACTGTTGGGTCTTGGCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp AGAGATTCCAAATCAGAAGGAAACGTGACATGGAGTCCCAGGCTCATGCCCTCCCAAAAGCCTTTGTCCTaGCTCCTTCCTGATAATGTT +
Preference number: 4 (lower is better)
Translates to: RDSKSEGNVTWSPRLMPSQKPLS*LLPDNV
Trigger: AACATTATCAGGAAGGAGCCAGGACAAAGGCTTTTG...GGAGGGCATGAGCCTGGGACTCCATGTCACGTTTCCTTCTGATTTGGAATCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp CTCATGACGGTTAGTTTATTAACTTCTGGCAGGTCTCCAGGAGTAAATAAAGGTCCTGCTCCAGTAAATTaGCTGCAAGCGCAGGTGCGC +
Preference number: 4 (lower is better)
Translates to: LMTVSLLTSGRSPGVNKGPAPVN*LQAQVR
Trigger: GCGCACCTGCGCTTGCAGCCAATTTACTGGAGCAGG...ACCTTTATTTACTCCTGGAGACCTGCCAGAAGTTAATAAACTAACCGTCATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545027.1
CDS-3UTR CCA 90 bp TGCTGGGTAGTTTGTCTAAGGTGCTCCAGGGTCCCTCTTGGTCTGCAAGAGAAGCTATCCGGAATATTTTaGATTCTTTGTCCTCCCATC +
Preference number: 4 (lower is better)
Translates to: CWVVCLRCSRVPLGLQEKLSGIF*ILCPPI
Trigger: GATGGGAGGACAAAGAATCCAAAATATTCCGGATAG...CTTCTCTTGCAGACCAAGAGGGACCCTGGAGCACCTTAGACAAACTACCCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp CAGCCTTCCATCCTTATCTTACGCCTTAGACACATGGTTCTCACAGCCATCTCAATGAGTCACGCCGGGTaGATTAGGCAGGTACAATAT +
Preference number: 4 (lower is better)
Translates to: QPSILILRLRHMVLTAISMSHAG*IRQVQY
Trigger: ATATTGTACCTGCCTAATCCACCCGGCGTGACTCAT...TGAGATGGCTGTGAGAACCATGTGTCTAAGGCGTAAGATAAGGATGGAAGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR GCA 90 bp TGCTGGGTAGTTTGTCTAAGGTGCTCCAGGGTCCCTCTTGGTCTGCAAGAGAAGTCATTTCAAACGTGTTaGTGTCAATTGGCCTTAAAG +
Preference number: 4 (lower is better)
Translates to: CWVVCLRCSRVPLGLQEKSFQTC*CQLALK
Trigger: CTTTAAGGCCAATTGACAGCAACACGTTTGAAATGA...CTTCTCTTGCAGACCAAGAGGGACCCTGGAGCACCTTAGACAAACTACCCAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR GCA 90 bp GCAGTTAGGGGAATTACGAAATCCTTATTGGTAGTACAGATTGATATCCCTTATCCAATGGGCATGGCGTaGTCTTCAGGCGGGGAGACA +
Preference number: 4 (lower is better)
Translates to: AVRGITKSLLVVQIDIPYPMGMA*SSGGET
Trigger: TGTCTCCCCGCCTGAAGAGCACGCCATGCCCATTGG...ATAAGGGATATCAATCTGTACTACCAATAAGGATTTCGTAATTCCCCTAACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR GCA 90 bp CGCCTTCTATTTCTTCTTCAAGTGGCTGAAGGTATCATCCTAAGTCTAACATATTCCTGGGACTCTAGGTaGTCCAGACGGTCTGTTCGG +
Preference number: 4 (lower is better)
Translates to: RLLFLLQVAEGIILSLTYSWDSR*SRRSVR
Trigger: CCGAACAGACCGTCTGGAGCACCTAGAGTCCCAGGA...ATATGTTAGACTTAGGATGATACCTTCAGCCACTTGAAGAAGAAATAGAAGGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR GCA 90 bp GCAGTTAGGGGAATTACGAAATCCTTATTGGTAGTACAGATTGATATCCCTTATTCTCCTCAGCCCGCCTaGTCCGTCACACTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: AVRGITKSLLVVQIDIPYSPQPA*SVTLPA
Trigger: TGCTGGAAGTGTGACGGAGCAGGCGGGCTGAGGAGA...ATAAGGGATATCAATCTGTACTACCAATAAGGATTTCGTAATTCCCCTAACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp GTCACGCCGGGTGGATTAGGCAGGTACAATATAAACTCTGAAAGCAGGGATTATGCAACAGTTCAATGGTaGGAGGGTTATGGTGCACAT +
Preference number: 4 (lower is better)
Translates to: VTPGGLGRYNINSESRDYATVQW*EGYGAH
Trigger: ATGTGCACCATAACCCTCCCACCATTGAACTGTTGC...ATAATCCCTGCTTTCAGAGTTTATATTGTACCTGCCTAATCCACCCGGCGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp GCAGTTAGGGGAATTACGAAATCCTTATTGGTAGTACAGATTGATATCCCTTATCACTTCCAGCAATCCTaGTGGGCAGGGGTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: AVRGITKSLLVVQIDIPYHFQQS*WAGVPW
Trigger: CCAGGGAACCCCTGCCCACCAGGATTGCTGGAAGTG...ATAAGGGATATCAATCTGTACTACCAATAAGGATTTCGTAATTCCCCTAACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp GTCACGCCGGGTGGATTAGGCAGGTACAATATAAACTCTGAAAGCAGGGATTATCTAGCACCAAATGCTTaGGCAAAGAAAACTGCCCCT +
Preference number: 4 (lower is better)
Translates to: VTPGGLGRYNINSESRDYLAPNA*AKKTAP
Trigger: AGGGGCAGTTTTCTTTGCCCAAGCATTTGGTGCTAG...ATAATCCCTGCTTTCAGAGTTTATATTGTACCTGCCTAATCCACCCGGCGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR CAA 72 bp ATTCAGGGGGTCTGCAGCTGTTTAGTGTTGATGCAGTaGGGTCAAAAGAGTATCAGGTTAGTCTTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: IQGVCSCLVLMQ*GQKSIRLVFCG
Trigger: CCCACAGAAGACTAACCTGATACTCTTTTGACCCAACTGCATCAACACTAAACAGCTGCAGACCCCCTGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp GCAGTTAGGGGAATTACGAAATCCTTATTGGTAGTACAGATTGATATCCCTTATCTCCATGGGAGACACTaGCAGAGGGTAGGACTCCTG +
Preference number: 4 (lower is better)
Translates to: AVRGITKSLLVVQIDIPYLHGRH*QRVGLL
Trigger: CAGGAGTCCTACCCTCTGTCAGTGTCTCCCATGGAG...ATAAGGGATATCAATCTGTACTACCAATAAGGATTTCGTAATTCCCCTAACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp CAGCCTTCCATCCTTATCTTACGCCTTAGACACATGGTTCTCACAGCCATCTCACAATTCCAGTGTCCTTaGACCATAGTCCATCTGTTT +
Preference number: 4 (lower is better)
Translates to: QPSILILRLRHMVLTAISQFQCP*TIVHLF
Trigger: AAACAGATGGACTATGGTTCAAGGACACTGGAATTG...TGAGATGGCTGTGAGAACCATGTGTCTAAGGCGTAAGATAAGGATGGAAGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp AGAGATTCCAAATCAGAAGGAAACGTGACATGGAGTCCCAGGCTCATGCCCTCCTGCTCAACCTGTATCTaGATGGGAAATAAAGACTAT +
Preference number: 4 (lower is better)
Translates to: RDSKSEGNVTWSPRLMPSCSTCI*MGNKDY
Trigger: ATAGTCTTTATTTCCCATTCAGATACAGGTTGAGCA...GGAGGGCATGAGCCTGGGACTCCATGTCACGTTTCCTTCTGATTTGGAATCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR GCA 90 bp GTCACGCCGGGTGGATTAGGCAGGTACAATATAAACTCTGAAAGCAGGGATTATCTGATTCTGTTTAGGTaGCAACAATCCCCAAGACTC +
Preference number: 4 (lower is better)
Translates to: VTPGGLGRYNINSESRDYLILFR*QQSPRL
Trigger: GAGTCTTGGGGATTGTTGGCACCTAAACAGAATCAG...ATAATCCCTGCTTTCAGAGTTTATATTGTACCTGCCTAATCCACCCGGCGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp CGCCTTCTATTTCTTCTTCAAGTGGCTGAAGGTATCATCCTAAGTCTAACATATCTCCAGGGTCCCTCTTaGTCTGCAAGAGAAGTGTCC +
Preference number: 4 (lower is better)
Translates to: RLLFLLQVAEGIILSLTYLQGPS*SAREVS
Trigger: GGACACTTCTCTTGCAGACCAAGAGGGACCCTGGAG...ATATGTTAGACTTAGGATGATACCTTCAGCCACTTGAAGAAGAAATAGAAGGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp CGCCTTCTATTTCTTCTTCAAGTGGCTGAAGGTATCATCCTAAGTCTAACATATACACCTGCAGCGTGCTaGGATCCAGCAGAATCTCAT +
Preference number: 4 (lower is better)
Translates to: RLLFLLQVAEGIILSLTYTPAAC*DPAESH
Trigger: ATGAGATTCTGCTGGATCTCAGCACGCTGCAGGTGT...ATATGTTAGACTTAGGATGATACCTTCAGCCACTTGAAGAAGAAATAGAAGGCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR GCA 90 bp GCAGTTAGGGGAATTACGAAATCCTTATTGGTAGTACAGATTGATATCCCTTATGGTGACCTGGAGCGGTaGAACAGTTCAATGGTGGGA +
Preference number: 4 (lower is better)
Translates to: AVRGITKSLLVVQIDIPYGDLER*NSSMVG
Trigger: TCCCACCATTGAACTGTTGCACCGCTCCAGGTCACC...ATAAGGGATATCAATCTGTACTACCAATAAGGATTTCGTAATTCCCCTAACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp CGCCTTCTATTTCTTCTTCAAGTGGCTGAAGGTATCATCCTAAGTCTAACATATGGCCTGGGGGTCCTCTaGACACAGTTATCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: RLLFLLQVAEGIILSLTYGLGVL*TQLSSS
Trigger: TGAAGAAGATAACTGTGTCCAGAGGACCCCCAGGCC...ATATGTTAGACTTAGGATGATACCTTCAGCCACTTGAAGAAGAAATAGAAGGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp CGCCTTCTATTTCTTCTTCAAGTGGCTGAAGGTATCATCCTAAGTCTAACATATTGTTCATCCAGCTCCTaGGACTCTAGGTGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: RLLFLLQVAEGIILSLTYCSSSS*DSRCSR
Trigger: TCTGGAGCACCTAGAGTCCCAGGAGCTGGATGAACA...ATATGTTAGACTTAGGATGATACCTTCAGCCACTTGAAGAAGAAATAGAAGGCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp CGCCTTCTATTTCTTCTTCAAGTGGCTGAAGGTATCATCCTAAGTCTAACATATTCTTCTTCATGGTTCTaGTGCAGTATGACCTCCGGC +
Preference number: 4 (lower is better)
Translates to: RLLFLLQVAEGIILSLTYSSSWF*CSMTSG
Trigger: GCCGGAGGTCATACTGCATCAGAACCATGAAGAAGA...ATATGTTAGACTTAGGATGATACCTTCAGCCACTTGAAGAAGAAATAGAAGGCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp CGCCTTCTATTTCTTCTTCAAGTGGCTGAAGGTATCATCCTAAGTCTAACATATGGTGCAACAGTTCAATaGTGGGAGGGTTATGGTGCA +
Preference number: 4 (lower is better)
Translates to: RLLFLLQVAEGIILSLTYGATVQ*WEGYGA
Trigger: TGCACCATAACCCTCCCACCATTGAACTGTTGCACC...ATATGTTAGACTTAGGATGATACCTTCAGCCACTTGAAGAAGAAATAGAAGGCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp GCAGTTAGGGGAATTACGAAATCCTTATTGGTAGTACAGATTGATATCCCTTATTCAGGGGCGGCTCTCTaGACTAGCATGTATCTGTCT +
Preference number: 4 (lower is better)
Translates to: AVRGITKSLLVVQIDIPYSGAAL*TSMYLS
Trigger: AGACAGATACATGCTAGTCCAGAGAGCCGCCCCTGA...ATAAGGGATATCAATCTGTACTACCAATAAGGATTTCGTAATTCCCCTAACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp CGTTTCCTCATGACGGTTAGTTTATTAACTTCTGGCAGGTCTCCAGGAGTAAATCATATAAACGGTCTGTaGCAACTGGGAAGAACAGTG +
Preference number: 4 (lower is better)
Translates to: RFLMTVSLLTSGRSPGVNHINGL*QLGRTV
Trigger: CACTGTTCTTCCCAGTTGCCACAGACCGTTTATATG...ATTTACTCCTGGAGACCTGCCAGAAGTTAATAAACTAACCGTCATGAGGAAACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545027.1
CDS-3UTR GCA 90 bp TTAGCATTTCTTCATATAAACGGTCTGTGGCAACTGGGAAGAACAGTGGAGATAGCAGCAGGAGAGCTTTaGCATTCATTTCAAACGTGT +
Preference number: 4 (lower is better)
Translates to: LAFLHINGLWQLGRTVEIAAGEL*HSFQTC
Trigger: ACACGTTTGAAATGAATGGCAAAGCTCTCCTGCTGC...TATCTCCACTGTTCTTCCCAGTTGCCACAGACCGTTTATATGAAGAAATGCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545027.1
CDS-3UTR GCA 90 bp CGCCTTCTATTTCTTCTTCAAGTGGCTGAAGGTATCATCCTAAGTCTAACATATCATAGTCCATCTGTTTaGACCCTAGGTTGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: RLLFLLQVAEGIILSLTYHSPSV*TLGWCP
Trigger: AGGACACCAACCTAGGGTGCAAACAGATGGACTATG...ATATGTTAGACTTAGGATGATACCTTCAGCCACTTGAAGAAGAAATAGAAGGCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp CGCCTTCTATTTCTTCTTCAAGTGGCTGAAGGTATCATCCTAAGTCTAACATATACTTCAAGACCCAAGTaGGAATGCACATCCATCACA +
Preference number: 4 (lower is better)
Translates to: RLLFLLQVAEGIILSLTYTSRPK*ECTSIT
Trigger: TGTGATGGATGTGCATTCTCACTTGGGTCTTGAAGT...ATATGTTAGACTTAGGATGATACCTTCAGCCACTTGAAGAAGAAATAGAAGGCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR GCA 90 bp GTCACGCCGGGTGGATTAGGCAGGTACAATATAAACTCTGAAAGCAGGGATTATTCTTTAAAAATTATTTaGAACTCACTGGCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: VTPGGLGRYNINSESRDYSLKII*NSLALR
Trigger: TCTCAGGGCCAGTGAGTTGCAAATAATTTTTAAAGA...ATAATCCCTGCTTTCAGAGTTTATATTGTACCTGCCTAATCCACCCGGCGTGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp CGCCTTCTATTTCTTCTTCAAGTGGCTGAAGGTATCATCCTAAGTCTAACATATTTTGTTCTGTTCTTATaGTTTCCCCACAGTCGAGCC +
Preference number: 4 (lower is better)
Translates to: RLLFLLQVAEGIILSLTYFVLFL*FPHSRA
Trigger: GGCTCGACTGTGGGGAAACCATAAGAACAGAACAAA...ATATGTTAGACTTAGGATGATACCTTCAGCCACTTGAAGAAGAAATAGAAGGCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp GTCACGCCGGGTGGATTAGGCAGGTACAATATAAACTCTGAAAGCAGGGATTATACTCATGATTTCATCTaGGGTTTTCATAAACCTGAA +
Preference number: 4 (lower is better)
Translates to: VTPGGLGRYNINSESRDYTHDFI*GFHKPE
Trigger: TTCAGGTTTATGAAAACCCCAGATGAAATCATGAGT...ATAATCCCTGCTTTCAGAGTTTATATTGTACCTGCCTAATCCACCCGGCGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp GCAGTTAGGGGAATTACGAAATCCTTATTGGTAGTACAGATTGATATCCCTTATGTTCTGGTTTGCAGGTaGTTGCGGTCACAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: AVRGITKSLLVVQIDIPYVLVCR*LRSQRE
Trigger: TTCTCTTTGTGACCGCAACCACCTGCAAACCAGAAC...ATAAGGGATATCAATCTGTACTACCAATAAGGATTTCGTAATTCCCCTAACTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR TCA 90 bp GCAGTTAGGGGAATTACGAAATCCTTATTGGTAGTACAGATTGATATCCCTTATTGCATTTTCCTCTCCTaGCTTCAGATTTGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: AVRGITKSLLVVQIDIPYCIFLS*LQICLL
Trigger: CAGGAGACAAATCTGAAGTCAGGAGAGGAAAATGCA...ATAAGGGATATCAATCTGTACTACCAATAAGGATTTCGTAATTCCCCTAACTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR GCA 90 bp GCAGTTAGGGGAATTACGAAATCCTTATTGGTAGTACAGATTGATATCCCTTATCCATGTCCTACTGAATaGTCTCAAAAGACACCTGCA +
Preference number: 4 (lower is better)
Translates to: AVRGITKSLLVVQIDIPYPCPTE*SQKTPA
Trigger: TGCAGGTGTCTTTTGAGAGCATTCAGTAGGACATGG...ATAAGGGATATCAATCTGTACTACCAATAAGGATTTCGTAATTCCCCTAACTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR GCA 90 bp CGCCTTCTATTTCTTCTTCAAGTGGCTGAAGGTATCATCCTAAGTCTAACATATCTAGCCAATTACCAGTaGTTTCTTCTGATAGAGAGG +
Preference number: 4 (lower is better)
Translates to: RLLFLLQVAEGIILSLTYLANYQ*FLLIER
Trigger: CCTCTCTATCAGAAGAAAGCACTGGTAATTGGCTAG...ATATGTTAGACTTAGGATGATACCTTCAGCCACTTGAAGAAGAAATAGAAGGCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CCA 90 bp CGCCTTCTATTTCTTCTTCAAGTGGCTGAAGGTATCATCCTAAGTCTAACATATGAAAGGTGGGAATGGTaGTTACTTCATCATTTCGGT +
Preference number: 4 (lower is better)
Translates to: RLLFLLQVAEGIILSLTYERWEW*LLHHFG
Trigger: ACCGAAATGATGAAGTAACCACCATTCCCACCTTTC...ATATGTTAGACTTAGGATGATACCTTCAGCCACTTGAAGAAGAAATAGAAGGCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR GCA 90 bp TTAGCATTTCTTCATATAAACGGTCTGTGGCAACTGGGAAGAACAGTGGAGATATCATTTCAAACGTGTTaGTGTCAATTGGCCTTAAAG +
Preference number: 4 (lower is better)
Translates to: LAFLHINGLWQLGRTVEISFQTC*CQLALK
Trigger: CTTTAAGGCCAATTGACAGCAACACGTTTGAAATGA...TATCTCCACTGTTCTTCCCAGTTGCCACAGACCGTTTATATGAAGAAATGCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545027.1
CDS-3UTR TCA 90 bp GCAGTTAGGGGAATTACGAAATCCTTATTGGTAGTACAGATTGATATCCCTTATTTCCAAACATACTGGTaGAAGGAGAAAATCCATTGG +
Preference number: 4 (lower is better)
Translates to: AVRGITKSLLVVQIDIPYFQTYW*KEKIHW
Trigger: CCAATGGATTTTCTCCTTTCACCAGTATGTTTGGAA...ATAAGGGATATCAATCTGTACTACCAATAAGGATTTCGTAATTCCCCTAACTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396373.9
3UTR CAA 72 bp AGGACATTTGCAGTTAGGGGAATTACGAAATCCTTATaGGTAGTACAGATTGATATCCCTTATCTGAAATGC +
Preference number: 4 (lower is better)
Translates to: RTFAVRGITKSL*VVQIDIPYLKC
Trigger: GCATTTCAGATAAGGGATATCAATCTGTACTACCAATAAGGATTTCGTAATTCCCCTAACTGCAAATGTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR GCA 90 bp GCAGTTAGGGGAATTACGAAATCCTTATTGGTAGTACAGATTGATATCCCTTATACTGAGAAAGCTCTTTaGTCATTGATCTTGAGAGTT +
Preference number: 4 (lower is better)
Translates to: AVRGITKSLLVVQIDIPYTEKAL*SLILRV
Trigger: AACTCTCAAGATCAATGAGCAAAGAGCTTTCTCAGT...ATAAGGGATATCAATCTGTACTACCAATAAGGATTTCGTAATTCCCCTAACTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS GCA 90 bp TGCATGATGGGGCTGGGCATCAGCTGGATCACGCGTGTGCTCTCCTaGCGGGGGCTGGATGGCTTCGGGTGGGACTCGGAGGACGCTGGG +
Preference number: 5 (lower is better)
Translates to: CMMGLGISWITRVLS*RGLDGFGWDSEDAG
Trigger: CCCAGCGTCCTCCGAGTCCCACCCGAAGCCATCCAGCCCCCGGCAGGAGAGCACACGCGTGATCCAGCTGATGCCCAGCCCCATCATGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS CCA 90 bp GGCTGGGCATCAGCTGGATCACGCGTGTGCTCTCCTGCCGGGGGCTaGATGGCTTCGGGTGGGACTCGGAGGACGCTGGGCAGTGATTAT +
Preference number: 5 (lower is better)
Translates to: GWASAGSRVCSPAGG*MASGGTRRTLGSDY
Trigger: ATAATCACTGCCCAGCGTCCTCCGAGTCCCACCCGAAGCCATCCAGCCCCCGGCAGGAGAGCACACGCGTGATCCAGCTGATGCCCAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS CCA 90 bp CTGACAGAGGGTAGGACTCCTGGTGGTTGTTCTCCTGGTGCGGCCTaGGTCCCTGAGCTCTCTCAGCCGGGGAGAGGCGGCGGATCATGT +
Preference number: 5 (lower is better)
Translates to: LTEGRTPGGCSPGAA*VPELSQPGRGGGSC
Trigger: ACATGATCCGCCGCCTCTCCCCGGCTGAGAGAGCTCAGGGACCCAGGCCGCACCAGGAGAACAACCACCAGGAGTCCTACCCTCTGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS CCA 90 bp GGGCATCAGCTGGATCACGCGTGTGCTCTCCTGCCGGGGGCTGGATaGCTTCGGGTGGGACTCGGAGGACGCTGGGCAGTGATTATTCTC +
Preference number: 5 (lower is better)
Translates to: GHQLDHACALLPGAG*LRVGLGGRWAVIIL
Trigger: GAGAATAATCACTGCCCAGCGTCCTCCGAGTCCCACCCGAAGCCATCCAGCCCCCGGCAGGAGAGCACACGCGTGATCCAGCTGATGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS TCA 90 bp GCAAGCGCAGGTGCGCAGGCAGGCGGATCGAGTCTTCCTCCATCCTaGGCGCTCGAGGCACTGGAACATGAAGTGGCGTCGAGGAAGCGT +
Preference number: 5 (lower is better)
Translates to: ASAGAQAGGSSLPPS*ALEALEHEVASRKR
Trigger: ACGCTTCCTCGACGCCACTTCATGTTCCAGTGCCTCGAGCGCTCAGGATGGAGGAAGACTCGATCCGCCTGCCTGCGCACCTGCGCTTGC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS TCA 90 bp CAGAACGCAGGTGCGCAGGCAGGCGGATCGAGTCTTCCTCCATCCTaGGCGCTCGAGGCACTGGAACATGAAGTGGCGTCGAGGAAGCGT +
Preference number: 5 (lower is better)
Translates to: QNAGAQAGGSSLPPS*ALEALEHEVASRKR
Trigger: ACGCTTCCTCGACGCCACTTCATGTTCCAGTGCCTCGAGCGCTCAGGATGGAGGAAGACTCGATCCGCCTGCCTGCGCACCTGCGTTCTG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541426.1
CDS TCA 90 bp ACTCACGCAGGTGCGCAGGCAGGCGGATCGAGTCTTCCTCCATCCTaGGCGCTCGAGGCACTGGAACATGAAGTGGCGTCGAGGAAGCGT +
Preference number: 5 (lower is better)
Translates to: THAGAQAGGSSLPPS*ALEALEHEVASRKR
Trigger: ACGCTTCCTCGACGCCACTTCATGTTCCAGTGCCTCGAGCGCTCAGGATGGAGGAAGACTCGATCCGCCTGCCTGCGCACCTGCGTGAGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544715.1
CDS GCA 90 bp GCCATCAATCCTCTGTCCCTCTCGGGTCACGAACACTCACGCAGGTaGGCAGGCAGGCGGATCGAGTCTTCCTCCATCCTGAGCGCTCGA +
Preference number: 5 (lower is better)
Translates to: AINPLSLSGHEHSRR*AGRRIESSSILSAR
Trigger: TCGAGCGCTCAGGATGGAGGAAGACTCGATCCGCCTGCCTGCGCACCTGCGTGAGTGTTCGTGACCCGAGAGGGACAGAGGATTGATGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544715.1
CDS CCA 90 bp AGGCAGGCGGATCGAGTCTTCCTCCATCCTGAGCGCTCGAGGCACTaGAACATGAAGTGGCGTCGAGGAAGCGTAACTCGGCACTGGGCT +
Preference number: 5 (lower is better)
Translates to: RQADRVFLHPERSRH*NMKWRRGSVTRHWA
Trigger: AGCCCAGTGCCGAGTTACGCTTCCTCGACGCCACTTCATGTTCCAGTGCCTCGAGCGCTCAGGATGGAGGAAGACTCGATCCGCCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396373.9
ENST00000541426.1
ENST00000544715.1
CDS GCA 90 bp GACTGTTTGAAATCCACGGAGTGCCGGGGGTTCAGGATCAGAGGGTaGATGATGGGGCTGGGCATCAGCTGGATCACGCGTGTGCTCTCC +
Preference number: 5 (lower is better)
Translates to: DCLKSTECRGFRIRG*MMGLGISWITRVLS
Trigger: GGAGAGCACACGCGTGATCCAGCTGATGCCCAGCCCCATCATGCACCCTCTGATCCTGAACCCCCGGCACTCCGTGGATTTCAAACAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS GCA 90 bp TCCGTCACACTTCCAGCAATCCTGGTGGGCAGGGGTTCCCTGGGCTaGTGGCCCGCTGAGGTGGACTGTTGGTTCCTTCAGCATTCATCT +
Preference number: 5 (lower is better)
Translates to: SVTLPAILVGRGSLG*WPAEVDCWFLQHSS
Trigger: AGATGAATGCTGAAGGAACCAACAGTCCACCTCAGCGGGCCAGCAGCCCAGGGAACCCCTGCCCACCAGGATTGCTGGAAGTGTGACGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS CCA 90 bp CGAGTCTTCCTCCATCCTGAGCGCTCGAGGCACTGGAACATGAAGTaGCGTCGAGGAAGCGTAACTCGGCACTGGGCTCTCTGGAGGTGT +
Preference number: 5 (lower is better)
Translates to: RVFLHPERSRHWNMK*RRGSVTRHWALWRC
Trigger: ACACCTCCAGAGAGCCCAGTGCCGAGTTACGCTTCCTCGACGCCACTTCATGTTCCAGTGCCTCGAGCGCTCAGGATGGAGGAAGACTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396373.9
ENST00000541426.1
ENST00000544715.1
CDS TCA 90 bp GGACTCGGAGGACGCTGGGCAGTGATTATTCTCCATGGGAGACACTaGCAGAGGGTAGGACTCCTGGTGGTTGTTCTCCTGGTGCGGCCT +
Preference number: 5 (lower is better)
Translates to: GLGGRWAVIILHGRH*QRVGLLVVVLLVRP
Trigger: AGGCCGCACCAGGAGAACAACCACCAGGAGTCCTACCCTCTGTCAGTGTCTCCCATGGAGAATAATCACTGCCCAGCGTCCTCCGAGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS CCA 90 bp GTCACACTTCCAGCAATCCTGGTGGGCAGGGGTTCCCTGGGCTGCTaGCCCGCTGAGGTGGACTGTTGGTTCCTTCAGCATTCATCTTCT +
Preference number: 5 (lower is better)
Translates to: VTLPAILVGRGSLGC*PAEVDCWFLQHSSS
Trigger: AGAAGATGAATGCTGAAGGAACCAACAGTCCACCTCAGCGGGCCAGCAGCCCAGGGAACCCCTGCCCACCAGGATTGCTGGAAGTGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS CCA 90 bp GCTTCGGGTGGGACTCGGAGGACGCTGGGCAGTGATTATTCTCCATaGGAGACACTGACAGAGGGTAGGACTCCTGGTGGTTGTTCTCCT +
Preference number: 5 (lower is better)
Translates to: ASGGTRRTLGSDYSP*ETLTEGRTPGGCSP
Trigger: AGGAGAACAACCACCAGGAGTCCTACCCTCTGTCAGTGTCTCCCATGGAGAATAATCACTGCCCAGCGTCCTCCGAGTCCCACCCGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CAA 90 bp TCCAAATCAGAAGGAAACGTGACATGGAGTCCCAGGCTCATGCCCTCCGCCAGACCCTGCTCCAGTAAATaGGCTGCAAGCGCAGGTGCG +
Preference number: 5 (lower is better)
Translates to: SKSEGNVTWSPRLMPSARPCSSK*AASAGA
Trigger: CGCACCTGCGCTTGCAGCCAATTTACTGGAGCAGGG...TCTGGCGGAGGGCATGAGCCTGGGACTCCATGTCACGTTTCCTTCTGATTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS CCA 90 bp ATAGGTGACCTGGAGCGGTGCAACAGTTCAATGGTGGGAGGGTTATaGTGCACATTATCCACGGATGGCCTGGGGGTCCTCTGGACACAG +
Preference number: 5 (lower is better)
Translates to: IGDLERCNSSMVGGL*CTLSTDGLGVLWTQ
Trigger: CTGTGTCCAGAGGACCCCCAGGCCATCCGTGGATAATGTGCACCATAACCCTCCCACCATTGAACTGTTGCACCGCTCCAGGTCACCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CAA 90 bp TGGAGATACGGGTGCTGGGGCTTTATCTCATCTCCTGTAATGAGGGACGTTTCCCCCTGCTCCAGTAAATaGGCTGCAAGCGCAGGTGCG +
Preference number: 5 (lower is better)
Translates to: WRYGCWGFISSPVMRDVSPCSSK*AASAGA
Trigger: CGCACCTGCGCTTGCAGCCAATTTACTGGAGCAGGG...GGAAACGTCCCTCATTACAGGAGATGAGATAAAGCCCCAGCACCCGTATCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545027.1
CDS-3UTR CAA 90 bp GACTGCTGGGCCTGTGTGGTCTTTTCATATTTTCCACTTTGCAGCGCTGCGCTCGAGAGCCTGGACTGTTaGAAATCCACGGAGTGCCGG +
Preference number: 5 (lower is better)
Translates to: DCWACVVFSYFPLCSAALESLDC*KSTECR
Trigger: CCGGCACTCCGTGGATTTCAAACAGTCCAGGCTCTC...GAGCGCAGCGCTGCAAAGTGGAAAATATGAAAAGACCACACAGGCCCAGCAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CAA 90 bp AGCCCGCCTGCTCCGTCACACTTCCAGCAATCCTGGTGGGCAGGGGTTCCCTGGAATATTTTGGATTCTTaGTCCTCCCATCGGATGAAG +
Preference number: 5 (lower is better)
Translates to: SPPAPSHFQQSWWAGVPWNILDS*SSHRMK
Trigger: CTTCATCCGATGGGAGGACAAAGAATCCAAAATATT...CCAGGGAACCCCTGCCCACCAGGATTGCTGGAAGTGTGACGGAGCAGGCGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CAA 90 bp TTACGCCTTAGACACATGGTTCTCACAGCCATCTCAGGGGCGGCTCTCTGGACTAGTCGAGCCAGTCCGTaGGGATCCACTATCCGGAAT +
Preference number: 5 (lower is better)
Translates to: LRLRHMVLTAISGAALWTSRASP*GSTIRN
Trigger: ATTCCGGATAGTGGATCCCAACGGACTGGCTCGACT...AGTCCAGAGAGCCGCCCCTGAGATGGCTGTGAGAACCATGTGTCTAAGGCGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CAA 90 bp ATCTTACGCCTTAGACACATGGTTCTCACAGCCATCTCAGGGGCGGCTCTCTGGCCTGTGCTGGGTAGTTaGTCTAAGGTGCTCCAGGGT +
Preference number: 5 (lower is better)
Translates to: ILRLRHMVLTAISGAALWPVLGS*SKVLQG
Trigger: ACCCTGGAGCACCTTAGACAAACTACCCAGCACAGG...CCAGAGAGCCGCCCCTGAGATGGCTGTGAGAACCATGTGTCTAAGGCGTAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CAA 90 bp TCCCGGAGGAGCTGTGAGTTTCTCCCCCAACTGAGTAGAGGAAACAGAGGGGAAACTGAGTTCTTGCACTaGGGTGAAGAGGCCAGACTG +
Preference number: 5 (lower is better)
Translates to: SRRSCEFLPQLSRGNRGETEFLH*GEEARL
Trigger: CAGTCTGGCCTCTTCACCCAAGTGCAAGAACTCAGT...TTCCCCTCTGTTTCCTCTACTCAGTTGGGGGAGAAACTCACAGCTCCTCCGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CAA 90 bp TTACGCCTTAGACACATGGTTCTCACAGCCATCTCAGGGGCGGCTCTCTGGACTTTCATATTTTCCACTTaGCAGCGCTGCGCTCCCAAG +
Preference number: 5 (lower is better)
Translates to: LRLRHMVLTAISGAALWTFIFST*QRCAPK
Trigger: CTTGGGAGCGCAGCGCTGCAAAGTGGAAAATATGAA...AGTCCAGAGAGCCGCCCCTGAGATGGCTGTGAGAACCATGTGTCTAAGGCGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CAA 90 bp ATCTTACGCCTTAGACACATGGTTCTCACAGCCATCTCAGGGGCGGCTCTCTGGTGTTTGCACCCTAGGTaGGTGTCCTTGTCAGTAAGG +
Preference number: 5 (lower is better)
Translates to: ILRLRHMVLTAISGAALWCLHPR*VSLSVR
Trigger: CCTTACTGACAAGGACACCAACCTAGGGTGCAAACA...CCAGAGAGCCGCCCCTGAGATGGCTGTGAGAACCATGTGTCTAAGGCGTAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CAA 90 bp AGGTTGAATGGTGGGGCGCCTGTGACAGTAGGAGTGGGCTGGCTATGCCCGTGTAAAGCTCTTTGCTCATaGATCTTGAGAGTTTCAGTG +
Preference number: 5 (lower is better)
Translates to: RLNGGAPVTVGVGWLCPCKALCS*ILRVSV
Trigger: CACTGAAACTCTCAAGATCAATGAGCAAAGAGCTTT...ACACGGGCATAGCCAGCCCACTCCTACTGTCACAGGCGCCCCACCATTCAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CAA 90 bp TGCTGGGTAGTTTGTCTAAGGTGCTCCAGGGTCCCTCTTGGTCTGCAAGAGAAGGACTGCCTGGCTAGCTaGAGATGTAGGAATGAGAAC +
Preference number: 5 (lower is better)
Translates to: CWVVCLRCSRVPLGLQEKDCLAS*RCRNEN
Trigger: GTTCTCATTCCTACATCTCAAGCTAGCCAGGCAGTC...CTTCTCTTGCAGACCAAGAGGGACCCTGGAGCACCTTAGACAAACTACCCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS CCA 90 bp GTTCAATGGTGGGAGGGTTATGGTGCACATTATCCACGGATGGCCTaGGGGTCCTCTGGACACAGTTATCTTCTTCATGGTTCTGATGCA +
Preference number: 5 (lower is better)
Translates to: VQWWEGYGAHYPRMA*GSSGHSYLLHGSDA
Trigger: TGCATCAGAACCATGAAGAAGATAACTGTGTCCAGAGGACCCCCAGGCCATCCGTGGATAATGTGCACCATAACCCTCCCACCATTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS CCA 90 bp TGGCCCGCTGAGGTGGACTGTTGGTTCCTTCAGCATTCATCTTCTTaGTATATTTGTTCATCCAGCTCCTGGGACTCTAGGTGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: WPAEVDCWFLQHSSS*YICSSSSWDSRCSR
Trigger: TCTGGAGCACCTAGAGTCCCAGGAGCTGGATGAACAAATATACCAAGAAGATGAATGCTGAAGGAACCAACAGTCCACCTCAGCGGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CAA 90 bp AGATACGGGTGCTGGGGCTTTATCTCATCTCCTGTAATGAGGGACGTTTCCTCATCATTTTCAGCCCACTaGAGCCACTGGGCTACGTCA +
Preference number: 5 (lower is better)
Translates to: RYGCWGFISSPVMRDVSSSFSAH*SHWATS
Trigger: TGACGTAGCCCAGTGGCTCAAGTGGGCTGAAAATGA...TGAGGAAACGTCCCTCATTACAGGAGATGAGATAAAGCCCCAGCACCCGTATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545027.1
CDS-3UTR CAA 90 bp GTCACGCCGGGTGGATTAGGCAGGTACAATATAAACTCTGAAAGCAGGGATTATTGCTGGGATGCGGGTTaGATTCTGTGCTGCTGGCCA +
Preference number: 5 (lower is better)
Translates to: VTPGGLGRYNINSESRDYCWDAG*ILCCWP
Trigger: TGGCCAGCAGCACAGAATCAAACCCGCATCCCAGCA...ATAATCCCTGCTTTCAGAGTTTATATTGTACCTGCCTAATCCACCCGGCGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CAA 90 bp TGCTGGGTAGTTTGTCTAAGGTGCTCCAGGGTCCCTCTTGGTCTGCAAGAGAAGGGCCTTCCAAATAACTaGGACAGCCTTCCATCCTTA +
Preference number: 5 (lower is better)
Translates to: CWVVCLRCSRVPLGLQEKGLPNN*DSLPSL
Trigger: TAAGGATGGAAGGCTGTCCAAGTTATTTGGAAGGCC...CTTCTCTTGCAGACCAAGAGGGACCCTGGAGCACCTTAGACAAACTACCCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CAA 90 bp TCCAAATCAGAAGGAAACGTGACATGGAGTCCCAGGCTCATGCCCTCCGCCAGACACTGCAGAATATTTTaGCCCAGTTTCTGGACTGCT +
Preference number: 5 (lower is better)
Translates to: SKSEGNVTWSPRLMPSARHCRIF*PSFWTA
Trigger: AGCAGTCCAGAAACTGGGCAAAAATATTCTGCAGTG...TCTGGCGGAGGGCATGAGCCTGGGACTCCATGTCACGTTTCCTTCTGATTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CAA 90 bp AGAGATTCCAAATCAGAAGGAAACGTGACATGGAGTCCCAGGCTCATGCCCTCCAGCGTTCAGGAAGGTTaGGATTTTGGGGCATTTGGG +
Preference number: 5 (lower is better)
Translates to: RDSKSEGNVTWSPRLMPSSVQEG*DFGAFG
Trigger: CCCAAATGCCCCAAAATCCAAACCTTCCTGAACGCT...GGAGGGCATGAGCCTGGGACTCCATGTCACGTTTCCTTCTGATTTGGAATCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CAA 90 bp ATGCCCTCCGCCAGAATTCCAGCCCCGCCTGTGCTGGGTAGTTTGTCTAAGGTGACCCAGGTTTCTTTTTaGCAAAAGGGAGTTCCTATT +
Preference number: 5 (lower is better)
Translates to: MPSARIPAPPVLGSLSKVTQVSF*QKGVPI
Trigger: AATAGGAACTCCCTTTTGCAAAAAAGAAACCTGGGT...CACCTTAGACAAACTACCCAGCACAGGCGGGGCTGGAATTCTGGCGGAGGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CAA 90 bp ATCTTACGCCTTAGACACATGGTTCTCACAGCCATCTCAGGGGCGGCTCTCTGGATCTTCTTGGTATATTaGTTCATCCAGCTCCTGGGA +
Preference number: 5 (lower is better)
Translates to: ILRLRHMVLTAISGAALWIFLVY*FIQLLG
Trigger: TCCCAGGAGCTGGATGAACAAATATACCAAGAAGAT...CCAGAGAGCCGCCCCTGAGATGGCTGTGAGAACCATGTGTCTAAGGCGTAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CAA 90 bp AGAGATTCCAAATCAGAAGGAAACGTGACATGGAGTCCCAGGCTCATGCCCTCCAGCCTAATTCCATTCTaGGCATGCTGTCTGCTCCTA +
Preference number: 5 (lower is better)
Translates to: RDSKSEGNVTWSPRLMPSSLIPF*ACCLLL
Trigger: TAGGAGCAGACAGCATGCCAAGAATGGAATTAGGCT...GGAGGGCATGAGCCTGGGACTCCATGTCACGTTTCCTTCTGATTTGGAATCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CAA 90 bp TTCAGCCAAGACCCAACAGTAACAGGAACAGACCTGATCCACGTGGCAGGAAAACTGGTTTGCAGGTGGTaGCGGTCACAAAGAGAAATC +
Preference number: 5 (lower is better)
Translates to: FSQDPTVTGTDLIHVAGKLVCRW*RSQREI
Trigger: GATTTCTCTTTGTGACCGCAACCACCTGCAAACCAG...TTTTCCTGCCACGTGGATCAGGTCTGTTCCTGTTACTGTTGGGTCTTGGCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS GCA 90 bp TCATCTTCTTGGTATATTTGTTCATCCAGCTCCTGGGACTCTAGGTaGTCCAGACGGTCTGTTCGGCCACTCATGATTTCATCTGGGGTT +
Preference number: 5 (lower is better)
Translates to: SSSWYICSSSSWDSR*SRRSVRPLMISSGV
Trigger: AACCCCAGATGAAATCATGAGTGGCCGAACAGACCGTCTGGAGCACCTAGAGTCCCAGGAGCTGGATGAACAAATATACCAAGAAGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS CCA 90 bp CAGAGTCGAGGTCTGAATGAGGAGATCGATAGCGAAAGTCCTCTTTaGTCAGCAGCAGGAGAGCTTTGCCATTCATTTCAAACGTGTTGC +
Preference number: 5 (lower is better)
Translates to: QSRGLNEEIDSESPL*SAAGELCHSFQTCC
Trigger: GCAACACGTTTGAAATGAATGGCAAAGCTCTCCTGCTGCTGACCAAAGAGGACTTTCGCTATCGATCTCCTCATTCAGACCTCGACTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545027.1
CDS-3UTR CAA 90 bp GTCACGCCGGGTGGATTAGGCAGGTACAATATAAACTCTGAAAGCAGGGATTATTCATTTTCAGCCCACTaGAGCCACTGGGCTACGTCA +
Preference number: 5 (lower is better)
Translates to: VTPGGLGRYNINSESRDYSFSAH*SHWATS
Trigger: TGACGTAGCCCAGTGGCTCAAGTGGGCTGAAAATGA...ATAATCCCTGCTTTCAGAGTTTATATTGTACCTGCCTAATCCACCCGGCGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CAA 90 bp TCCAAATCAGAAGGAAACGTGACATGGAGTCCCAGGCTCATGCCCTCCGCCAGATGTATCCTGGAATATTaGTGTATGTGTGTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: SKSEGNVTWSPRLMPSARCILEY*CMCVCV
Trigger: CACACACACACACATACACAAATATTCCAGGATACA...TCTGGCGGAGGGCATGAGCCTGGGACTCCATGTCACGTTTCCTTCTGATTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CAA 90 bp ATCTTACGCCTTAGACACATGGTTCTCACAGCCATCTCAGGGGCGGCTCTCTGGAAGCGACATTCTCATTaGGACAAGAGATCAGTATCA +
Preference number: 5 (lower is better)
Translates to: ILRLRHMVLTAISGAALWKRHSH*DKRSVS
Trigger: TGATACTGATCTCTTGTCCAAATGAGAATGTCGCTT...CCAGAGAGCCGCCCCTGAGATGGCTGTGAGAACCATGTGTCTAAGGCGTAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS TCA 90 bp TGTTGCTGTCAATTGGCCTTAAAGAAAACTCATTTTCAGCCCACTTaGGCCACTGGGCTACGTCATCCCTGCTCCAGTAAATTGGCTGCA +
Preference number: 5 (lower is better)
Translates to: CCCQLALKKTHFQPT*ATGLRHPCSSKLAA
Trigger: TGCAGCCAATTTACTGGAGCAGGGATGACGTAGCCCAGTGGCTCAAGTGGGCTGAAAATGAGTTTTCTTTAAGGCCAATTGACAGCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396373.9
ENST00000545027.1
CDS CCA 90 bp AGAGCACATCACCTGAATGAGGAGATCGATAGCGAAAGTCCTCTTTaGTCAGCAGCAGGAGAGCTTTGCCATTCATTTCAAACGTGTTGC +
Preference number: 5 (lower is better)
Translates to: RAHHLNEEIDSESPL*SAAGELCHSFQTCC
Trigger: GCAACACGTTTGAAATGAATGGCAAAGCTCTCCTGCTGCTGACCAAAGAGGACTTTCGCTATCGATCTCCTCATTCAGGTGATGTGCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS CCA 90 bp TTCCTTCAGCATTCATCTTCTTGGTATATTTGTTCATCCAGCTCCTaGGACTCTAGGTGCTCCAGACGGTCTGTTCGGCCACTCATGATT +
Preference number: 5 (lower is better)
Translates to: FLQHSSSWYICSSSS*DSRCSRRSVRPLMI
Trigger: AATCATGAGTGGCCGAACAGACCGTCTGGAGCACCTAGAGTCCCAGGAGCTGGATGAACAAATATACCAAGAAGATGAATGCTGAAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CAA 90 bp ATCTTACGCCTTAGACACATGGTTCTCACAGCCATCTCAGGGGCGGCTCTCTGGTCTCATAGGTCATGTTaGTTCTGTTCTTATGGTTTC +
Preference number: 5 (lower is better)
Translates to: ILRLRHMVLTAISGAALWSHRSC*FCSYGF
Trigger: GAAACCATAAGAACAGAACAAACATGACCTATGAGA...CCAGAGAGCCGCCCCTGAGATGGCTGTGAGAACCATGTGTCTAAGGCGTAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS CCA 90 bp TGTTTGTTCTGTTCTTATGGTTTCCCCACAGTCGAGCCAGTCCGTTaGGATCCACTATCCGGAATATTTTGGATTCTTTGTCCTCCCATC +
Preference number: 5 (lower is better)
Translates to: CLFCSYGFPTVEPVR*DPLSGIFWILCPPI
Trigger: GATGGGAGGACAAAGAATCCAAAATATTCCGGATAGTGGATCCCAACGGACTGGCTCGACTGTGGGGAAACCATAAGAACAGAACAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CAA 90 bp TTCAGCCAAGACCCAACAGTAACAGGAACAGACCTGATCCACGTGGCAGGAAAATTAGTGTTGATGCAGTaGGGTCAAAAGAGTATCAGG +
Preference number: 5 (lower is better)
Translates to: FSQDPTVTGTDLIHVAGKLVLMQ*GQKSIR
Trigger: CCTGATACTCTTTTGACCCAACTGCATCAACACTAA...TTTTCCTGCCACGTGGATCAGGTCTGTTCCTGTTACTGTTGGGTCTTGGCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CAA 90 bp CATGTATCTGTCTGCAGCACAGCAGCATCTGTGATGATTTTGGCCTCCCTCAGAGTGCTTCATCAAGGTTaGCTAACTGAATCTGAAATC +
Preference number: 5 (lower is better)
Translates to: HVSVCSTAASVMILASLRVLHQG*LTESEI
Trigger: GATTTCAGATTCAGTTAGCAAACCTTGATGAAGCAC...TCTGAGGGAGGCCAAAATCATCACAGATGCTGCTGTGCTGCAGACAGATACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS GCA 90 bp GAGATCGATAGCGAAAGTCCTCTTTGGTCAGCAGCAGGAGAGCTTTaGCATTCATTTCAAACGTGTTGCTGTCAATTGGCCTTAAAGAAA +
Preference number: 5 (lower is better)
Translates to: EIDSESPLWSAAGEL*HSFQTCCCQLALKK
Trigger: TTTCTTTAAGGCCAATTGACAGCAACACGTTTGAAATGAATGGCAAAGCTCTCCTGCTGCTGACCAAAGAGGACTTTCGCTATCGATCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396373.9
ENST00000545027.1
CDS-3UTR CAA 90 bp CGTTTCCTCATGACGGTTAGTTTATTAACTTCTGGCAGGTCTCCAGGAGTAAATAGCAGCAGGAGAGCTTaGCCATTCATTTCAAACGTG +
Preference number: 5 (lower is better)
Translates to: RFLMTVSLLTSGRSPGVNSSRRA*PFISNV
Trigger: CACGTTTGAAATGAATGGCAAAGCTCTCCTGCTGCT...ATTTACTCCTGGAGACCTGCCAGAAGTTAATAAACTAACCGTCATGAGGAAACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545027.1
CDS-3UTR CAA 90 bp GCAGTTAGGGGAATTACGAAATCCTTATTGGTAGTACAGATTGATATCCCTTATCCTGACCAGCTGGGCTaGCCGCACTTTGTGAGATTT +
Preference number: 5 (lower is better)
Translates to: AVRGITKSLLVVQIDIPYPDQLG*PHFVRF
Trigger: AAATCTCACAAAGTGCGGCAAGCCCAGCTGGTCAGG...ATAAGGGATATCAATCTGTACTACCAATAAGGATTTCGTAATTCCCCTAACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CAA 90 bp CTCATGACGGTTAGTTTATTAACTTCTGGCAGGTCTCCAGGAGTAAATAAAGGTCAGGATCCTCGCCCTTaGTCAAGTTACATCAGAGTC +
Preference number: 5 (lower is better)
Translates to: LMTVSLLTSGRSPGVNKGQDPRP*SSYIRV
Trigger: GACTCTGATGTAACTTGACAAAGGGCGAGGATCCTG...ACCTTTATTTACTCCTGGAGACCTGCCAGAAGTTAATAAACTAACCGTCATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545027.1
CDS TCA 90 bp CGTCGAGGAAGCGTAACTCGGCACTGGGCTCTCTGGAGGTGTATATaGAATTCGTTCCTGCATGTGAAAGAAAAATCACATAATTTTAGA +
Preference number: 5 (lower is better)
Translates to: RRGSVTRHWALWRCI*NSFLHVKEKSHNFR
Trigger: TCTAAAATTATGTGATTTTTCTTTCACATGCAGGAACGAATTTCATATACACCTCCAGAGAGCCCAGTGCCGAGTTACGCTTCCTCGACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544715.1
CDS-3UTR CAA 90 bp GTCACGCCGGGTGGATTAGGCAGGTACAATATAAACTCTGAAAGCAGGGATTATACGTGTTGCTGTCAATaGGCCTTAAAGAAAACTCAT +
Preference number: 5 (lower is better)
Translates to: VTPGGLGRYNINSESRDYTCCCQ*ALKKTH
Trigger: ATGAGTTTTCTTTAAGGCCAATTGACAGCAACACGT...ATAATCCCTGCTTTCAGAGTTTATATTGTACCTGCCTAATCCACCCGGCGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CAA 90 bp CAGCCTTCCATCCTTATCTTACGCCTTAGACACATGGTTCTCACAGCCATCTCATTCATTTCAAACGTGTaGCTGTCAATTGGCCTTAAA +
Preference number: 5 (lower is better)
Translates to: QPSILILRLRHMVLTAISFISNV*LSIGLK
Trigger: TTTAAGGCCAATTGACAGCAACACGTTTGAAATGAA...TGAGATGGCTGTGAGAACCATGTGTCTAAGGCGTAAGATAAGGATGGAAGGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CAA 90 bp CTGGGGCTTTATCTCATCTCCTGTAATGAGGGACGTTTCCTCATGACGGTTAGTTTCATTTCAAACGTGTaGCTGTCAATTGGCCTTAAA +
Preference number: 5 (lower is better)
Translates to: LGLYLISCNEGRFLMTVSFISNV*LSIGLK
Trigger: TTTAAGGCCAATTGACAGCAACACGTTTGAAATGAA...ACTAACCGTCATGAGGAAACGTCCCTCATTACAGGAGATGAGATAAAGCCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545027.1
CDS-3UTR CAA 90 bp CGCCTTCTATTTCTTCTTCAAGTGGCTGAAGGTATCATCCTAAGTCTAACATATCTCCTGACTTCAGATTaGTCTCCTGACAACACCCCT +
Preference number: 5 (lower is better)
Translates to: RLLFLLQVAEGIILSLTYLLTSD*SPDNTP
Trigger: AGGGGTGTTGTCAGGAGACAAATCTGAAGTCAGGAG...ATATGTTAGACTTAGGATGATACCTTCAGCCACTTGAAGAAGAAATAGAAGGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CAA 90 bp CGCCTTCTATTTCTTCTTCAAGTGGCTGAAGGTATCATCCTAAGTCTAACATATACTAGCACCAAATGCTaGGGCAAAGAAAACTGCCCC +
Preference number: 5 (lower is better)
Translates to: RLLFLLQVAEGIILSLTYTSTKC*GKENCP
Trigger: GGGGCAGTTTTCTTTGCCCAAGCATTTGGTGCTAGT...ATATGTTAGACTTAGGATGATACCTTCAGCCACTTGAAGAAGAAATAGAAGGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CAA 90 bp CGCCTTCTATTTCTTCTTCAAGTGGCTGAAGGTATCATCCTAAGTCTAACATATACCCCACTGGCTTCCTaGTGTCACAGCCTTTATTTC +
Preference number: 5 (lower is better)
Translates to: RLLFLLQVAEGIILSLTYTPLAS*CHSLYF
Trigger: GAAATAAAGGCTGTGACACAAGGAAGCCAGTGGGGT...ATATGTTAGACTTAGGATGATACCTTCAGCCACTTGAAGAAGAAATAGAAGGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CAA 90 bp GGGCTTTATCTCATCTCCTGTAATGAGGGACGTTTCCTCATGACGGTTAGTTTAACGTGTTGCTGTCAATaGGCCTTAAAGAAAACTCAT +
Preference number: 5 (lower is better)
Translates to: GLYLISCNEGRFLMTVSLTCCCQ*ALKKTH
Trigger: ATGAGTTTTCTTTAAGGCCAATTGACAGCAACACGT...TAAACTAACCGTCATGAGGAAACGTCCCTCATTACAGGAGATGAGATAAAGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545027.1
CDS-3UTR CAA 90 bp CGCCTTCTATTTCTTCTTCAAGTGGCTGAAGGTATCATCCTAAGTCTAACATATAGCAGCAGGAGAGCTTaGCCATTCATTTCAAACGTG +
Preference number: 5 (lower is better)
Translates to: RLLFLLQVAEGIILSLTYSSRRA*PFISNV
Trigger: CACGTTTGAAATGAATGGCAAAGCTCTCCTGCTGCT...ATATGTTAGACTTAGGATGATACCTTCAGCCACTTGAAGAAGAAATAGAAGGCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CAA 90 bp GCAGTTAGGGGAATTACGAAATCCTTATTGGTAGTACAGATTGATATCCCTTATAGGCTGAAGAGAGCCTaGATCAGCTCCTCAATTCCA +
Preference number: 5 (lower is better)
Translates to: AVRGITKSLLVVQIDIPYRLKRA*ISSSIP
Trigger: TGGAATTGAGGAGCTGATCAAGGCTCTCTTCAGCCT...ATAAGGGATATCAATCTGTACTACCAATAAGGATTTCGTAATTCCCCTAACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CAA 90 bp GTCACGCCGGGTGGATTAGGCAGGTACAATATAAACTCTGAAAGCAGGGATTATAGAAAGCAAATGTGTTaGTTAGGTGTGGAATTTTCC +
Preference number: 5 (lower is better)
Translates to: VTPGGLGRYNINSESRDYRKQMC*LGVEFS
Trigger: GGAAAATTCCACACCTAACAAACACATTTGCTTTCT...ATAATCCCTGCTTTCAGAGTTTATATTGTACCTGCCTAATCCACCCGGCGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CAA 90 bp CGCCTTCTATTTCTTCTTCAAGTGGCTGAAGGTATCATCCTAAGTCTAACATATTGCAGCTGTTTAGTGTaGATGCAGTTGGGTCAAAAG +
Preference number: 5 (lower is better)
Translates to: RLLFLLQVAEGIILSLTYCSCLV*MQLGQK
Trigger: CTTTTGACCCAACTGCATCAACACTAAACAGCTGCA...ATATGTTAGACTTAGGATGATACCTTCAGCCACTTGAAGAAGAAATAGAAGGCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS-3UTR CAA 90 bp GCAGTTAGGGGAATTACGAAATCCTTATTGGTAGTACAGATTGATATCCCTTATTTCTTTAAAAATTATTaGCAACTCACTGGCCCTGAG +
Preference number: 5 (lower is better)
Translates to: AVRGITKSLLVVQIDIPYFFKNY*QLTGPE
Trigger: CTCAGGGCCAGTGAGTTGCAAATAATTTTTAAAGAA...ATAAGGGATATCAATCTGTACTACCAATAAGGATTTCGTAATTCCCCTAACTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS GCA 72 bp GGGCTGGGCATCAGCTGGATCACGCGTGTGCTCTCCTaGCGGGGGCTGGATGGCTTCGGGTGGGACTCGGAG +
Preference number: 6 (lower is better)
Translates to: GLGISWITRVLS*RGLDGFGWDSE
Trigger: CTCCGAGTCCCACCCGAAGCCATCCAGCCCCCGGCAGGAGAGCACACGCGTGATCCAGCTGATGCCCAGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS CCA 72 bp CTGGATCACGCGTGTGCTCTCCTGCCGGGGGCTGGATaGCTTCGGGTGGGACTCGGAGGACGCTGGGCAGTG +
Preference number: 6 (lower is better)
Translates to: LDHACALLPGAG*LRVGLGGRWAV
Trigger: CACTGCCCAGCGTCCTCCGAGTCCCACCCGAAGCCATCCAGCCCCCGGCAGGAGAGCACACGCGTGATCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS CCA 72 bp TCAGCTGGATCACGCGTGTGCTCTCCTGCCGGGGGCTaGATGGCTTCGGGTGGGACTCGGAGGACGCTGGGC +
Preference number: 6 (lower is better)
Translates to: SAGSRVCSPAGG*MASGGTRRTLG
Trigger: GCCCAGCGTCCTCCGAGTCCCACCCGAAGCCATCCAGCCCCCGGCAGGAGAGCACACGCGTGATCCAGCTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS CCA 72 bp GGTAGGACTCCTGGTGGTTGTTCTCCTGGTGCGGCCTaGGTCCCTGAGCTCTCTCAGCCGGGGAGAGGCGGC +
Preference number: 6 (lower is better)
Translates to: GRTPGGCSPGAA*VPELSQPGRGG
Trigger: GCCGCCTCTCCCCGGCTGAGAGAGCTCAGGGACCCAGGCCGCACCAGGAGAACAACCACCAGGAGTCCTACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS TCA 72 bp TCCTGGTGGTTGTTCTCCTGGTGCGGCCTGGGTCCCTaGGCTCTCTCAGCCGGGGAGAGGCGGCGGATCATG +
Preference number: 6 (lower is better)
Translates to: SWWLFSWCGLGP*ALSAGERRRIM
Trigger: CATGATCCGCCGCCTCTCCCCGGCTGAGAGAGCTCAGGGACCCAGGCCGCACCAGGAGAACAACCACCAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS TCA 72 bp CGGAGGGGCCGCTGCTCGGGGTCAGGAGAAGGCCGGTaGTTTGTCGTGATAGGTGACCTGGAGCGGTGCAAC +
Preference number: 6 (lower is better)
Translates to: RRGRCSGSGEGR*FVVIGDLERCN
Trigger: GTTGCACCGCTCCAGGTCACCTATCACGACAAATCACCGGCCTTCTCCTGACCCCGAGCAGCGGCCCCTCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS TCA 72 bp GGTGCGCAGGCAGGCGGATCGAGTCTTCCTCCATCCTaGGCGCTCGAGGCACTGGAACATGAAGTGGCGTCG +
Preference number: 6 (lower is better)
Translates to: GAQAGGSSLPPS*ALEALEHEVAS
Trigger: CGACGCCACTTCATGTTCCAGTGCCTCGAGCGCTCAGGATGGAGGAAGACTCGATCCGCCTGCCTGCGCACC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396373.9
ENST00000541426.1
ENST00000544715.1
ENST00000545027.1
CDS GCA 72 bp CTTCCAGCAATCCTGGTGGGCAGGGGTTCCCTGGGCTaGTGGCCCGCTGAGGTGGACTGTTGGTTCCTTCAG +
Preference number: 6 (lower is better)
Translates to: LPAILVGRGSLG*WPAEVDCWFLQ
Trigger: CTGAAGGAACCAACAGTCCACCTCAGCGGGCCAGCAGCCCAGGGAACCCCTGCCCACCAGGATTGCTGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS GCA 72 bp CCTCTGTCCCTCTCGGGTCACGAACACTCACGCAGGTaGGCAGGCAGGCGGATCGAGTCTTCCTCCATCCTG +
Preference number: 6 (lower is better)
Translates to: PLSLSGHEHSRR*AGRRIESSSIL
Trigger: CAGGATGGAGGAAGACTCGATCCGCCTGCCTGCGCACCTGCGTGAGTGTTCGTGACCCGAGAGGGACAGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544715.1
CDS CCA 72 bp AGGATCAGAGGGTGCATGATGGGGCTGGGCATCAGCTaGATCACGCGTGTGCTCTCCTGCCGGGGGCTGGAT +
Preference number: 6 (lower is better)
Translates to: RIRGCMMGLGIS*ITRVLSCRGLD
Trigger: ATCCAGCCCCCGGCAGGAGAGCACACGCGTGATCCAGCTGATGCCCAGCCCCATCATGCACCCTCTGATCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS CAA 90 bp GGCTTCCCTTCCCTATGCAGCCCGTCCTCGGAGAGCCTGGACTGTTaGAAATCCACGGAGTGCCGGGGGTTCAGGATCAGAGGGTGCATG +
Preference number: 6 (lower is better)
Translates to: GFPSLCSPSSESLDC*KSTECRGFRIRGCM
Trigger: CATGCACCCTCTGATCCTGAACCCCCGGCACTCCGTGGATTTCAAACAGTCCAGGCTCTCCGAGGACGGGCTGCATAGGGAAGGGAAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS TCA 72 bp CCCTATGCAGCCCGTCCTCGGAGAGCCTGGACTGTTTaGAATCCACGGAGTGCCGGGGGTTCAGGATCAGAG +
Preference number: 6 (lower is better)
Translates to: PYAARPRRAWTV*NPRSAGGSGSE
Trigger: CTCTGATCCTGAACCCCCGGCACTCCGTGGATTTCAAACAGTCCAGGCTCTCCGAGGACGGGCTGCATAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS GCA 72 bp AAATCCACGGAGTGCCGGGGGTTCAGGATCAGAGGGTaGATGATGGGGCTGGGCATCAGCTGGATCACGCGT +
Preference number: 6 (lower is better)
Translates to: KSTECRGFRIRG*MMGLGISWITR
Trigger: ACGCGTGATCCAGCTGATGCCCAGCCCCATCATGCACCCTCTGATCCTGAACCCCCGGCACTCCGTGGATTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS CCA 72 bp CTCCATCCTGAGCGCTCGAGGCACTGGAACATGAAGTaGCGTCGAGGAAGCGTAACTCGGCACTGGGCTCTC +
Preference number: 6 (lower is better)
Translates to: LHPERSRHWNMK*RRGSVTRHWAL
Trigger: GAGAGCCCAGTGCCGAGTTACGCTTCCTCGACGCCACTTCATGTTCCAGTGCCTCGAGCGCTCAGGATGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396373.9
ENST00000541426.1
ENST00000544715.1
CDS CAA 72 bp TCCCTATGCAGCCCGTCCTCGGAGAGCCTGGACTGTTaGAAATCCACGGAGTGCCGGGGGTTCAGGATCAGA +
Preference number: 6 (lower is better)
Translates to: SLCSPSSESLDC*KSTECRGFRIR
Trigger: TCTGATCCTGAACCCCCGGCACTCCGTGGATTTCAAACAGTCCAGGCTCTCCGAGGACGGGCTGCATAGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS TCA 72 bp GGGGTCAGGAGAAGGCCGGTGATTTGTCGTGATAGGTaGCCTGGAGCGGTGCAACAGTTCAATGGTGGGAGG +
Preference number: 6 (lower is better)
Translates to: GVRRRPVICRDR*PGAVQQFNGGR
Trigger: CCTCCCACCATTGAACTGTTGCACCGCTCCAGGTCACCTATCACGACAAATCACCGGCCTTCTCCTGACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS TCA 72 bp GGTTCATGTAAGCCAGGTCTTCCCGATGAGAGAGGTTaGTGGGCTTCCCTTCCCTATGCAGCCCGTCCTCGG +
Preference number: 6 (lower is better)
Translates to: GSCKPGLPDERG*WASLPYAARPR
Trigger: CCGAGGACGGGCTGCATAGGGAAGGGAAGCCCATCAACCTCTCTCATCGGGAAGACCTGGCTTACATGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS CCA 72 bp GATCGAGTCTTCCTCCATCCTGAGCGCTCGAGGCACTaGAACATGAAGTGGCGTCGAGGAAGCGTAACTCGG +
Preference number: 6 (lower is better)
Translates to: DRVFLHPERSRH*NMKWRRGSVTR
Trigger: CCGAGTTACGCTTCCTCGACGCCACTTCATGTTCCAGTGCCTCGAGCGCTCAGGATGGAGGAAGACTCGATC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396373.9
ENST00000541426.1
ENST00000544715.1
CDS CCA 72 bp GGGACTCGGAGGACGCTGGGCAGTGATTATTCTCCATaGGAGACACTGACAGAGGGTAGGACTCCTGGTGGT +
Preference number: 6 (lower is better)
Translates to: GTRRTLGSDYSP*ETLTEGRTPGG
Trigger: ACCACCAGGAGTCCTACCCTCTGTCAGTGTCTCCCATGGAGAATAATCACTGCCCAGCGTCCTCCGAGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS TCA 72 bp GGACGCTGGGCAGTGATTATTCTCCATGGGAGACACTaGCAGAGGGTAGGACTCCTGGTGGTTGTTCTCCTG +
Preference number: 6 (lower is better)
Translates to: GRWAVIILHGRH*QRVGLLVVVLL
Trigger: CAGGAGAACAACCACCAGGAGTCCTACCCTCTGTCAGTGTCTCCCATGGAGAATAATCACTGCCCAGCGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS GCA 72 bp AGTCTACAGTCTGCTATTCTCCCAATGGGCATGGCGTaGTCTTCAGGCGGGGAGACAGAGACCATGATGTGG +
Preference number: 6 (lower is better)
Translates to: SLQSAILPMGMA*SSGGETETMMW
Trigger: CCACATCATGGTCTCTGTCTCCCCGCCTGAAGAGCACGCCATGCCCATTGGGAGAATAGCAGACTGTAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS CCA 72 bp TGGGAGGGTTATGGTGCACATTATCCACGGATGGCCTaGGGGTCCTCTGGACACAGTTATCTTCTTCATGGT +
Preference number: 6 (lower is better)
Translates to: WEGYGAHYPRMA*GSSGHSYLLHG
Trigger: ACCATGAAGAAGATAACTGTGTCCAGAGGACCCCCAGGCCATCCGTGGATAATGTGCACCATAACCCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS CCA 72 bp AATGGTGGGAGGGTTATGGTGCACATTATCCACGGATaGCCTGGGGGTCCTCTGGACACAGTTATCTTCTTC +
Preference number: 6 (lower is better)
Translates to: NGGRVMVHIIHG*PGGPLDTVIFF
Trigger: GAAGAAGATAACTGTGTCCAGAGGACCCCCAGGCCATCCGTGGATAATGTGCACCATAACCCTCCCACCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS CCA 72 bp GGTTCCCTGGGCTGCTGGCCCGCTGAGGTGGACTGTTaGTTCCTTCAGCATTCATCTTCTTGGTATATTTGT +
Preference number: 6 (lower is better)
Translates to: GSLGCWPAEVDC*FLQHSSSWYIC
Trigger: ACAAATATACCAAGAAGATGAATGCTGAAGGAACCAACAGTCCACCTCAGCGGGCCAGCAGCCCAGGGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS CAA 90 bp CGAGCCAGTCCGTTGGGATCCACTATCCGGAATATTTTGGATTCTTaGTCCTCCCATCGGATGAAGTTTTCGTACCGGCTGTCAGAAAGC +
Preference number: 6 (lower is better)
Translates to: RASPLGSTIRNILDS*SSHRMKFSYRLSES
Trigger: GCTTTCTGACAGCCGGTACGAAAACTTCATCCGATGGGAGGACAAAGAATCCAAAATATTCCGGATAGTGGATCCCAACGGACTGGCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS GCA 72 bp TGGTATATTTGTTCATCCAGCTCCTGGGACTCTAGGTaGTCCAGACGGTCTGTTCGGCCACTCATGATTTCA +
Preference number: 6 (lower is better)
Translates to: WYICSSSSWDSR*SRRSVRPLMIS
Trigger: TGAAATCATGAGTGGCCGAACAGACCGTCTGGAGCACCTAGAGTCCCAGGAGCTGGATGAACAAATATACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS CCA 72 bp CATTCATCTTCTTGGTATATTTGTTCATCCAGCTCCTaGGACTCTAGGTGCTCCAGACGGTCTGTTCGGCCA +
Preference number: 6 (lower is better)
Translates to: HSSSWYICSSSS*DSRCSRRSVRP
Trigger: TGGCCGAACAGACCGTCTGGAGCACCTAGAGTCCCAGGAGCTGGATGAACAAATATACCAAGAAGATGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS GCA 72 bp AGCGAAAGTCCTCTTTGGTCAGCAGCAGGAGAGCTTTaGCATTCATTTCAAACGTGTTGCTGTCAATTGGCC +
Preference number: 6 (lower is better)
Translates to: SESPLWSAAGEL*HSFQTCCCQLA
Trigger: GGCCAATTGACAGCAACACGTTTGAAATGAATGGCAAAGCTCTCCTGCTGCTGACCAAAGAGGACTTTCGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396373.9
ENST00000545027.1
CDS CAA 72 bp CCGTTGGGATCCACTATCCGGAATATTTTGGATTCTTaGTCCTCCCATCGGATGAAGTTTTCGTACCGGCTG +
Preference number: 6 (lower is better)
Translates to: PLGSTIRNILDS*SSHRMKFSYRL
Trigger: CAGCCGGTACGAAAACTTCATCCGATGGGAGGACAAAGAATCCAAAATATTCCGGATAGTGGATCCCAACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS TCA 72 bp CAATTGGCCTTAAAGAAAACTCATTTTCAGCCCACTTaGGCCACTGGGCTACGTCATCCCTGCTCCAGTAAA +
Preference number: 6 (lower is better)
Translates to: QLALKKTHFQPT*ATGLRHPCSSK
Trigger: TTTACTGGAGCAGGGATGACGTAGCCCAGTGGCTCAAGTGGGCTGAAAATGAGTTTTCTTTAAGGCCAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396373.9
ENST00000545027.1
CDS CCA 72 bp CACCTGAATGAGGAGATCGATAGCGAAAGTCCTCTTTaGTCAGCAGCAGGAGAGCTTTGCCATTCATTTCAA +
Preference number: 6 (lower is better)
Translates to: HLNEEIDSESPL*SAAGELCHSFQ
Trigger: TTGAAATGAATGGCAAAGCTCTCCTGCTGCTGACCAAAGAGGACTTTCGCTATCGATCTCCTCATTCAGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS CCA 72 bp GAGGTGGACTGTTGGTTCCTTCAGCATTCATCTTCTTaGTATATTTGTTCATCCAGCTCCTGGGACTCTAGG +
Preference number: 6 (lower is better)
Translates to: EVDCWFLQHSSS*YICSSSSWDSR
Trigger: CCTAGAGTCCCAGGAGCTGGATGAACAAATATACCAAGAAGATGAATGCTGAAGGAACCAACAGTCCACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS CCA 72 bp GGTCTGAATGAGGAGATCGATAGCGAAAGTCCTCTTTaGTCAGCAGCAGGAGAGCTTTGCCATTCATTTCAA +
Preference number: 6 (lower is better)
Translates to: GLNEEIDSESPL*SAAGELCHSFQ
Trigger: TTGAAATGAATGGCAAAGCTCTCCTGCTGCTGACCAAAGAGGACTTTCGCTATCGATCTCCTCATTCAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545027.1
CDS CAA 72 bp CTGTTCTTATGGTTTCCCCACAGTCGAGCCAGTCCGTaGGGATCCACTATCCGGAATATTTTGGATTCTTTG +
Preference number: 6 (lower is better)
Translates to: LFLWFPHSRASP*GSTIRNILDSL
Trigger: CAAAGAATCCAAAATATTCCGGATAGTGGATCCCAACGGACTGGCTCGACTGTGGGGAAACCATAAGAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS CAA 90 bp ATGTTTGTTCTGTTCTTATGGTTTCCCCACAGTCGAGCCAGTCCGTaGGGATCCACTATCCGGAATATTTTGGATTCTTTGTCCTCCCAT +
Preference number: 6 (lower is better)
Translates to: MFVLFLWFPHSRASP*GSTIRNILDSLSSH
Trigger: ATGGGAGGACAAAGAATCCAAAATATTCCGGATAGTGGATCCCAACGGACTGGCTCGACTGTGGGGAAACCATAAGAACAGAACAAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS CCA 72 bp TGTTCTTATGGTTTCCCCACAGTCGAGCCAGTCCGTTaGGATCCACTATCCGGAATATTTTGGATTCTTTGT +
Preference number: 6 (lower is better)
Translates to: CSYGFPTVEPVR*DPLSGIFWILC
Trigger: ACAAAGAATCCAAAATATTCCGGATAGTGGATCCCAACGGACTGGCTCGACTGTGGGGAAACCATAAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396373.9
CDS GCA 72 bp CTCTTGTTTGAGTCCCTTATTTCAGAGATAGAGAAATaGAGATGTCTAAGGCAGTCCAGCTGCAGCTCTGAA +
Preference number: 6 (lower is better)
Translates to: LLFESLISEIEK*RCLRQSSCSSE
Trigger: TTCAGAGCTGCAGCTGGACTGCCTTAGACATCTGCATTTCTCTATCTCTGAAATAAGGGACTCAAACAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544715.1
CDS CAA 90 bp TCTTTGGTCAGCAGCAGGAGAGCTTTGCCATTCATTTCAAACGTGTaGCTGTCAATTGGCCTTAAAGAAAACTCATTTTCAGCCCACTTG +
Preference number: 6 (lower is better)
Translates to: SLVSSRRALPFISNV*LSIGLKENSFSAHL
Trigger: CAAGTGGGCTGAAAATGAGTTTTCTTTAAGGCCAATTGACAGCAACACGTTTGAAATGAATGGCAAAGCTCTCCTGCTGCTGACCAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396373.9
ENST00000545027.1