RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ETV4 (Homo sapiens)

Ensembl gene IDs: ENSG00000175832

Ensembl transcript IDs: ENST00000319349.10, ENST00000393664.6, ENST00000538265.5, ENST00000545089.5, ENST00000545954.5, ENST00000585508.5, ENST00000586764.1, ENST00000586826.1, ENST00000587151.5, ENST00000590236.5, ENST00000591713.5

Found 440 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTCTTCAACCTCCGCCTGCCTCTGGGAACACAGAGCACCAAGAACTaGCAAACCGGGACCCTCCAGGGCCACAGCGTGGGGCAGAGTCCA +
Preference number: 1 (lower is better)
Translates to: FFNLRLPLGTQSTKN*QTGTLQGHSVGQSP
Trigger: TGGACTCTGCCCCACGCTGTGGCCCTGGAGGGTCCCGGTTTGTCAGTTCTTGGTGCTCTGTGTTCCCAGAGGCAGGCGGAGGTTGAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
3UTR TCA 90 bp GTCCAGGCTTCTGTCTCCCCGCAGTGGGAGATCTGGGGAGCTCAGTaGACCTCCTCACCCTCCTGCCAGTATGAAGTTGGGAAGCGCCTT +
Preference number: 1 (lower is better)
Translates to: VQASVSPQWEIWGAQ*TSSPSCQYEVGKRL
Trigger: AAGGCGCTTCCCAACTTCATACTGGCAGGAGGGTGAGGAGGTTCACTGAGCTCCCCAGATCTCCCACTGCGGGGAGACAGAAGCCTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
3UTR GCA 90 bp ATACCCAGCACCCCTCATCCCAGGTTCCTTTCTTCAACCTCCGCCTaGCTCTGGGAACACAGAGCACCAAGAACTGACAAACCGGGACCC +
Preference number: 1 (lower is better)
Translates to: IPSTPHPRFLSSTSA*LWEHRAPRTDKPGP
Trigger: GGGTCCCGGTTTGTCAGTTCTTGGTGCTCTGTGTTCCCAGAGGCAGGCGGAGGTTGAAGAAAGGAACCTGGGATGAGGGGTGCTGGGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
3UTR GCA 90 bp CAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTaGCCCAGAGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACA +
Preference number: 1 (lower is better)
Translates to: QLRVWARATGRTVGI*PRDICGFQMKVSPT
Trigger: TGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCTCTGGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
3UTR CCA 90 bp GGAGAAGTGGGGGCCTTTATTAAGGTCTGGCAGATGTGGTGGAGGTaGAAGTACAAACCCAGGCCTGGGCCTAGGAAAGGGCAGAAGAAA +
Preference number: 1 (lower is better)
Translates to: GEVGAFIKVWQMWWR*KYKPRPGPRKGQKK
Trigger: TTTCTTCTGCCCTTTCCTAGGCCCAGGCCTGGGTTTGTACTTCCACCTCCACCACATCTGCCAGACCTTAATAAAGGCCCCCACTTCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
3UTR-3UTR TCA 90 bp CCCTCATCCCAGGTTCCTTTCTTCAACCTCCGCCTGCCTCTGGGAACACAGAGCCCTCCAGGGCCCAGGTaGAACCCCCAGGGGAGTTTC +
Preference number: 2 (lower is better)
Translates to: PSSQVPFFNLRLPLGTQSPPGPR*NPQGSF
Trigger: GAAACTCCCCTGGGGGTTTCACCTGGGCCCTGGAGG...GCTCTGTGTTCCCAGAGGCAGGCGGAGGTTGAAGAAAGGAACCTGGGATGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
3UTR-3UTR TCA 90 bp CACAGCGTGGGGCAGAGTCCAGGCTTCTGTCTCCCCGCAGTGGGAGATCTGGGGACCCTCCTGCCAGTATaGAGTTGGGAAGCGCCTTCT +
Preference number: 2 (lower is better)
Translates to: HSVGQSPGFCLPAVGDLGTLLPV*SWEAPS
Trigger: AGAAGGCGCTTCCCAACTTCATACTGGCAGGAGGGT...CCCCAGATCTCCCACTGCGGGGAGACAGAAGCCTGGACTCTGCCCCACGCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
3UTR CAA 90 bp CCAGGCCTGGGCCTAGGAAAGGGCAGAAGAAAGGCAAAGGGTCCCTaGGAGCAGGAACCCATCCCTCTCTGCTTATACCCAGCACCCCTC +
Preference number: 2 (lower is better)
Translates to: PGLGLGKGRRKAKGP*EQEPIPLCLYPAPL
Trigger: GAGGGGTGCTGGGTATAAGCAGAGAGGGATGGGTTCCTGCTCCAAGGGACCCTTTGCCTTTCTTCTGCCCTTTCCTAGGCCCAGGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
3UTR-3UTR TCA 90 bp ACTGACAAACCGGGACCCTCCAGGGCCACAGCGTGGGGCAGAGTCCAGGCTTCTCCCCAGGGGAGTTTCTaGGACTCTAGACTTGCCATT +
Preference number: 2 (lower is better)
Translates to: TDKPGPSRATAWGRVQASPQGSF*DSRLAI
Trigger: AATGGCAAGTCTAGAGTCTCAGAAACTCCCCTGGGG...AGAAGCCTGGACTCTGCCCCACGCTGTGGCCCTGGAGGGTCCCGGTTTGTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
3UTR-3UTR TCA 90 bp TCTGCTTATACCCAGCACCCCTCATCCCAGGTTCCTTTCTTCAACCTCCGCCTGCCTCCAGGGCCCAGGTaGAACCCCCAGGGGAGTTTC +
Preference number: 2 (lower is better)
Translates to: SAYTQHPSSQVPFFNLRLPPGPR*NPQGSF
Trigger: GAAACTCCCCTGGGGGTTTCACCTGGGCCCTGGAGG...CAGGCGGAGGTTGAAGAAAGGAACCTGGGATGAGGGGTGCTGGGTATAAGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
3UTR-3UTR TCA 90 bp GGGGAGCTCAGTGAACCTCCTCACCCTCCTGCCAGTATGAAGTTGGGAAGCGCCGACCTAGGAAGAAGCTaGGCTGAATTCCTCCAGGGC +
Preference number: 2 (lower is better)
Translates to: GELSEPPHPPASMKLGSADLGRS*AEFLQG
Trigger: GCCCTGGAGGAATTCAGCTCAGCTTCTTCCTAGGTC...GGCGCTTCCCAACTTCATACTGGCAGGAGGGTGAGGAGGTTCACTGAGCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
3UTR-3UTR CCA 90 bp CCCCTCATCCCAGGTTCCTTTCTTCAACCTCCGCCTGCCTCTGGGAACACAGAGGAGCAGCTCAGAGTCTaGGCTAGGGCAACTGGTAGG +
Preference number: 2 (lower is better)
Translates to: PLIPGSFLQPPPASGNTEEQLRV*ARATGR
Trigger: CCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTC...CTCTGTGTTCCCAGAGGCAGGCGGAGGTTGAAGAAAGGAACCTGGGATGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
3UTR-3UTR TCA 90 bp AGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCAGAGTCTGTGGGTTTCAGATaGAGGTTTCCCCAACACCAG +
Preference number: 2 (lower is better)
Translates to: SSESGLGQLVGQWGSAPESVGFR*RFPQHQ
Trigger: CTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGA...CTCTGGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
3UTR-3UTR TCA 90 bp GGTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCTCTGTGGGTTTCAGATaGAGGTTTCCCCAACACCAG +
Preference number: 2 (lower is better)
Translates to: GEQLRVWARATGRTVGICSVGFR*RFPQHQ
Trigger: CTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGA...GCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
3UTR-3UTR TCA 90 bp TCTGCTTATACCCAGCACCCCTCATCCCAGGTTCCTTTCTTCAACCTCCGCCTGCAGAGCACCAAGAACTaGCAAACCGGGACCCTCCAG +
Preference number: 2 (lower is better)
Translates to: SAYTQHPSSQVPFFNLRLQSTKN*QTGTLQ
Trigger: CTGGAGGGTCCCGGTTTGTCAGTTCTTGGTGCTCTG...CAGGCGGAGGTTGAAGAAAGGAACCTGGGATGAGGGGTGCTGGGTATAAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
3UTR-3UTR GCA 90 bp TCTGCTTATACCCAGCACCCCTCATCCCAGGTTCCTTTCTTCAACCTCCGCCTGAGGACAGTGGGGATCTaGCCCAGAGACATCTGTGGG +
Preference number: 2 (lower is better)
Translates to: SAYTQHPSSQVPFFNLRLRTVGI*PRDICG
Trigger: CCCACAGATGTCTCTGGGGCAGATCCCCACTGTCCT...CAGGCGGAGGTTGAAGAAAGGAACCTGGGATGAGGGGTGCTGGGTATAAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
3UTR-3UTR GCA 90 bp CCAGGTTCCTTTCTTCAACCTCCGCCTGCCTCTGGGAACACAGAGCACCAAGAAAGGACAGTGGGGATCTaGCCCAGAGACATCTGTGGG +
Preference number: 2 (lower is better)
Translates to: PGSFLQPPPASGNTEHQERTVGI*PRDICG
Trigger: CCCACAGATGTCTCTGGGGCAGATCCCCACTGTCCT...TTCTTGGTGCTCTGTGTTCCCAGAGGCAGGCGGAGGTTGAAGAAAGGAACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
3UTR-3UTR TCA 90 bp CTTCCCAATGACTCCGGTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGTCTGTGGGTTTCAGATaGAGGTTTCCCCAACACCAG +
Preference number: 2 (lower is better)
Translates to: LPNDSGEQLRVWARATGRSVGFR*RFPQHQ
Trigger: CTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGA...CCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCACCGGAGTCATTGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
3UTR-3UTR GCA 90 bp ACCCCTCATCCCAGGTTCCTTTCTTCAACCTCCGCCTGCCTCTGGGAACACAGAACCTCCTCACCCTCCTaGCAGTATGAAGTTGGGAAG +
Preference number: 2 (lower is better)
Translates to: TPHPRFLSSTSACLWEHRTSSPS*QYEVGK
Trigger: CTTCCCAACTTCATACTGGCAGGAGGGTGAGGAGGT...TCTGTGTTCCCAGAGGCAGGCGGAGGTTGAAGAAAGGAACCTGGGATGAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
3UTR-3UTR TCA 90 bp ACCCCTCATCCCAGGTTCCTTTCTTCAACCTCCGCCTGCCTCTGGGAACACAGATCTGTGGGTTTCAGATaGAGGTTTCCCCAACACCAG +
Preference number: 2 (lower is better)
Translates to: TPHPRFLSSTSACLWEHRSVGFR*RFPQHQ
Trigger: CTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGA...TCTGTGTTCCCAGAGGCAGGCGGAGGTTGAAGAAAGGAACCTGGGATGAGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
3UTR-3UTR TCA 90 bp CTTCAACCTCCGCCTGCCTCTGGGAACACAGAGCACCAAGAACTGACAAACCGGTCTGTGGGTTTCAGATaGAGGTTTCCCCAACACCAG +
Preference number: 2 (lower is better)
Translates to: LQPPPASGNTEHQELTNRSVGFR*RFPQHQ
Trigger: CTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGA...CCGGTTTGTCAGTTCTTGGTGCTCTGTGTTCCCAGAGGCAGGCGGAGGTTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
3UTR-3UTR TCA 90 bp CTTTCTTCAACCTCCGCCTGCCTCTGGGAACACAGAGCACCAAGAACTGACAAAGACCTAGGAAGAAGCTaGGCTGAATTCCTCCAGGGC +
Preference number: 2 (lower is better)
Translates to: LSSTSACLWEHRAPRTDKDLGRS*AEFLQG
Trigger: GCCCTGGAGGAATTCAGCTCAGCTTCTTCCTAGGTC...TTTGTCAGTTCTTGGTGCTCTGTGTTCCCAGAGGCAGGCGGAGGTTGAAGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
3UTR-3UTR CCA 90 bp CTTTCTTCAACCTCCGCCTGCCTCTGGGAACACAGAGCACCAAGAACTGACAAACAACTGGTAGGACAGTaGGGATCTGCCCCAGAGACA +
Preference number: 2 (lower is better)
Translates to: LSSTSACLWEHRAPRTDKQLVGQ*GSAPET
Trigger: TGTCTCTGGGGCAGATCCCCACTGTCCTACCAGTTG...TTTGTCAGTTCTTGGTGCTCTGTGTTCCCAGAGGCAGGCGGAGGTTGAAGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
3UTR-3UTR CCA 90 bp CTGCTTATACCCAGCACCCCTCATCCCAGGTTCCTTTCTTCAACCTCCGCCTGCAACTCTTGTTCTCTGTaGTTGGGGAAAAGGTGTGGG +
Preference number: 2 (lower is better)
Translates to: LLIPSTPHPRFLSSTSACNSCSL*LGKRCG
Trigger: CCCACACCTTTTCCCCAACCACAGAGAACAAGAGTT...GCAGGCGGAGGTTGAAGAAAGGAACCTGGGATGAGGGGTGCTGGGTATAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
3UTR-3UTR GCA 90 bp GAAGTGGGGGCCTTTATTAAGGTCTGGCAGATGTGGTGGAGGTGGAAGTACAAAACCTCCTCACCCTCCTaGCAGTATGAAGTTGGGAAG +
Preference number: 2 (lower is better)
Translates to: EVGAFIKVWQMWWRWKYKTSSPS*QYEVGK
Trigger: CTTCCCAACTTCATACTGGCAGGAGGGTGAGGAGGT...TTTGTACTTCCACCTCCACCACATCTGCCAGACCTTAATAAAGGCCCCCACTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
3UTR-3UTR CCA 90 bp TTCCTTTCTTCAACCTCCGCCTGCCTCTGGGAACACAGAGCACCAAGAACTGACAACTCTTGTTCTCTGTaGTTGGGGAAAAGGTGTGGG +
Preference number: 2 (lower is better)
Translates to: FLSSTSACLWEHRAPRTDNSCSL*LGKRCG
Trigger: CCCACACCTTTTCCCCAACCACAGAGAACAAGAGTT...GTCAGTTCTTGGTGCTCTGTGTTCCCAGAGGCAGGCGGAGGTTGAAGAAAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
3UTR TCA 72 bp CTCCGCCTGCCTCTGGGAACACAGAGCACCAAGAACTaGCAAACCGGGACCCTCCAGGGCCACAGCGTGGGG +
Preference number: 3 (lower is better)
Translates to: LRLPLGTQSTKN*QTGTLQGHSVG
Trigger: CCCCACGCTGTGGCCCTGGAGGGTCCCGGTTTGTCAGTTCTTGGTGCTCTGTGTTCCCAGAGGCAGGCGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
3UTR-3UTR CAA 90 bp ACTGACAAACCGGGACCCTCCAGGGCCACAGCGTGGGGCAGAGTCCAGGCTTCTCCTGCCAGTATGAAGTaGGGAAGCGCCTTCTCTGTC +
Preference number: 3 (lower is better)
Translates to: TDKPGPSRATAWGRVQASPASMK*GSAFSV
Trigger: GACAGAGAAGGCGCTTCCCAACTTCATACTGGCAGG...AGAAGCCTGGACTCTGCCCCACGCTGTGGCCCTGGAGGGTCCCGGTTTGTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
3UTR TCA 72 bp TCTGTCTCCCCGCAGTGGGAGATCTGGGGAGCTCAGTaGACCTCCTCACCCTCCTGCCAGTATGAAGTTGGG +
Preference number: 3 (lower is better)
Translates to: SVSPQWEIWGAQ*TSSPSCQYEVG
Trigger: CCCAACTTCATACTGGCAGGAGGGTGAGGAGGTTCACTGAGCTCCCCAGATCTCCCACTGCGGGGAGACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
3UTR-3UTR CAA 90 bp CCCTCATCCCAGGTTCCTTTCTTCAACCTCCGCCTGCCTCTGGGAACACAGAGCCCTGCCAGTATGAAGTaGGGAAGCGCCTTCTCTGTC +
Preference number: 3 (lower is better)
Translates to: PSSQVPFFNLRLPLGTQSPASMK*GSAFSV
Trigger: GACAGAGAAGGCGCTTCCCAACTTCATACTGGCAGG...GCTCTGTGTTCCCAGAGGCAGGCGGAGGTTGAAGAAAGGAACCTGGGATGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
3UTR TCA 72 bp GGGAGCTCAGTGAACCTCCTCACCCTCCTGCCAGTATaGAGTTGGGAAGCGCCTTCTCTGTCCCCCAGAACA +
Preference number: 3 (lower is better)
Translates to: GSSVNLLTLLPV*SWEAPSLSPRT
Trigger: TGTTCTGGGGGACAGAGAAGGCGCTTCCCAACTTCATACTGGCAGGAGGGTGAGGAGGTTCACTGAGCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
3UTR GCA 72 bp GTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTaGCCCAGAGACATCTGTGGGTTTCAGATGAAGGTT +
Preference number: 3 (lower is better)
Translates to: VWARATGRTVGI*PRDICGFQMKV
Trigger: AACCTTCATCTGAAACCCACAGATGTCTCTGGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
3UTR-3UTR CAA 90 bp CCCTCATCCCAGGTTCCTTTCTTCAACCTCCGCCTGCCTCTGGGAACACAGAGCTCTGAGACTCTAGACTaGCCATTTCTCCACTTTTCC +
Preference number: 3 (lower is better)
Translates to: PSSQVPFFNLRLPLGTQSSETLD*PFLHFS
Trigger: GGAAAAGTGGAGAAATGGCAAGTCTAGAGTCTCAGA...GCTCTGTGTTCCCAGAGGCAGGCGGAGGTTGAAGAAAGGAACCTGGGATGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
3UTR-3UTR CAA 90 bp TCTGCTTATACCCAGCACCCCTCATCCCAGGTTCCTTTCTTCAACCTCCGCCTGTCTGAGACTCTAGACTaGCCATTTCTCCACTTTTCC +
Preference number: 3 (lower is better)
Translates to: SAYTQHPSSQVPFFNLRLSETLD*PFLHFS
Trigger: GGAAAAGTGGAGAAATGGCAAGTCTAGAGTCTCAGA...CAGGCGGAGGTTGAAGAAAGGAACCTGGGATGAGGGGTGCTGGGTATAAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CCA 90 bp GGACCCTCCAGGGCCACAGCGTGGGGCAGAGTCCAGGCTTCTGTCTCCCCGCAGCTGCTGGGGATAGGGTaGGCAGGGCTCCGACAGCTG +
Preference number: 4 (lower is better)
Translates to: GPSRATAWGRVQASVSPQLLGIG*AGLRQL
Trigger: CAGCTGTCGGAGCCCTGCCCACCCTATCCCCAGCAG...CTGCGGGGAGACAGAAGCCTGGACTCTGCCCCACGCTGTGGCCCTGGAGGGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR TCA 90 bp GCCACAGCGTGGGGCAGAGTCCAGGCTTCTGTCTCCCCGCAGTGGGAGATCTGGGGTACCTGTGCCCATTaGCCCCACCCTGGTCCACGG +
Preference number: 4 (lower is better)
Translates to: ATAWGRVQASVSPQWEIWGTCAH*PHPGPR
Trigger: CCGTGGACCAGGGTGGGGTCAATGGGCACAGGTACC...CCAGATCTCCCACTGCGGGGAGACAGAAGCCTGGACTCTGCCCCACGCTGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR TCA 90 bp CTTCCCAATGACTCCGGTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGGGGAGCCCGGGTCCATaGGCTTCCCCAGCGGGCCGA +
Preference number: 4 (lower is better)
Translates to: LPNDSGEQLRVWARATGRGSPGP*ASPAGR
Trigger: TCGGCCCGCTGGGGAAGCTCATGGACCCGGGCTCCC...CCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCACCGGAGTCATTGGGAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp CTTCCCAATGACTCCGGTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGGTCCCGAGCATGCCCTaGAGCCCGCACCGAGGGCCG +
Preference number: 4 (lower is better)
Translates to: LPNDSGEQLRVWARATGRVPSMP*SPHRGP
Trigger: CGGCCCTCGGTGCGGGCTCCAGGGCATGCTCGGGAC...CCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCACCGGAGTCATTGGGAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319349.10
ENST00000545954.5
CDS-3UTR CCA 90 bp GGACCCTCCAGGGCCACAGCGTGGGGCAGAGTCCAGGCTTCTGTCTCCCCGCAGGGGGGTCATAGGCACTaGAGTAAAGGCACTGCTCGC +
Preference number: 4 (lower is better)
Translates to: GPSRATAWGRVQASVSPQGGHRH*SKGTAR
Trigger: GCGAGCAGTGCCTTTACTCCAGTGCCTATGACCCCC...CTGCGGGGAGACAGAAGCCTGGACTCTGCCCCACGCTGTGGCCCTGGAGGGTCC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CCA 90 bp GGTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCGTGTTGGTAGGGGGCTaGGAGGGGTTCCCGGCCCCC +
Preference number: 4 (lower is better)
Translates to: GEQLRVWARATGRTVGICVLVGG*EGFPAP
Trigger: GGGGGCCGGGAACCCCTCCCAGCCCCCTACCAACAC...GCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp ACAGAGCACCAAGAACTGACAAACCGGGACCCTCCAGGGCCACAGCGTGGGGCACCATTGACCCCACCCTaGTCCACGGCTGGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: TEHQELTNRDPPGPQRGAPLTPP*STAGWP
Trigger: GGGCCAGCCAGCCGTGGACCAGGGTGGGGTCAATGG...TGCCCCACGCTGTGGCCCTGGAGGGTCCCGGTTTGTCAGTTCTTGGTGCTCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR TCA 90 bp GAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCCCTCCAGGGCCCAGGTaGAACCCCCAGGGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: EQLRVWARATGRTVGICPPPGPR*NPQGSF
Trigger: GAAACTCCCCTGGGGGTTTCACCTGGGCCCTGGAGG...GGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR GCA 90 bp TACCCAGCACCCCTCATCCCAGGTTCCTTTCTTCAACCTCCGCCTGCCTCTGGGGTGGCGGCTTCCTGCTaGAGGACAGGGCCGGGTCTG +
Preference number: 4 (lower is better)
Translates to: YPAPLIPGSFLQPPPASGVAASC*RTGPGL
Trigger: CAGACCCGGCCCTGTCCTGCAGCAGGAAGCCGCCAC...CCCAGAGGCAGGCGGAGGTTGAAGAAAGGAACCTGGGATGAGGGGTGCTGGGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR GCA 90 bp AGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCAGAGGGAGTGGCGGCTTCCTaGTGCAGGACAGGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: SSESGLGQLVGQWGSAPEGVAAS*CRTGPG
Trigger: ACCCGGCCCTGTCCTGCAGCAGGAAGCCGCCACTCC...CTCTGGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR GCA 90 bp GAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCGCCCCTGGGTACCTGTaGCCATTGACCCCACCCTGG +
Preference number: 4 (lower is better)
Translates to: EQLRVWARATGRTVGICPAPGYL*PLTPPW
Trigger: CCAGGGTGGGGTCAATGGGCACAGGTACCCAGGGGC...GGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR GCA 90 bp GGGCCACAGCGTGGGGCAGAGTCCAGGCTTCTGTCTCCCCGCAGTGGGAGATCTCGGCCCCTCTCGAAATaGACCGACCCCTTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: GPQRGAESRLLSPRSGRSRPLSK*TDPFLL
Trigger: AAGCAGGAAGGGGTCGGTGCATTTCGAGAGGGGCCG...AGATCTCCCACTGCGGGGAGACAGAAGCCTGGACTCTGCCCCACGCTGTGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CCA 90 bp CAAGAACTGACAAACCGGGACCCTCCAGGGCCACAGCGTGGGGCAGAGTCCAGGTGGTCCACGGCTGGCTaGCCCGCCTGTTCATACAGG +
Preference number: 4 (lower is better)
Translates to: QELTNRDPPGPQRGAESRWSTAG*PACSYR
Trigger: CCTGTATGAACAGGCGGGCCAGCCAGCCGTGGACCA...CCTGGACTCTGCCCCACGCTGTGGCCCTGGAGGGTCCCGGTTTGTCAGTTCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CCA 90 bp AGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCAGAGCCATTGACCCCACCCTaGTCCACGGCTGGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: SSESGLGQLVGQWGSAPEPLTPP*STAGWP
Trigger: GGGCCAGCCAGCCGTGGACCAGGGTGGGGTCAATGG...CTCTGGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp GCCACAGCGTGGGGCAGAGTCCAGGCTTCTGTCTCCCCGCAGTGGGAGATCTGGCATAGCCATAGCCCATaGCCCCGTCACCTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: ATAWGRVQASVSPQWEIWHSHSP*PRHLER
Trigger: CCTCTCCAGGTGACGGGGCCATGGGCTATGGCTATG...CCAGATCTCCCACTGCGGGGAGACAGAAGCCTGGACTCTGCCCCACGCTGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR TCA 90 bp GGTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCGGTACCTGTGCCCATTaGCCCCACCCTGGTCCACGG +
Preference number: 4 (lower is better)
Translates to: GEQLRVWARATGRTVGICGTCAH*PHPGPR
Trigger: CCGTGGACCAGGGTGGGGTCAATGGGCACAGGTACC...GCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp CACAGCGTGGGGCAGAGTCCAGGCTTCTGTCTCCCCGCAGTGGGAGATCTGGGGCAGAGCACCAAGAACTaGCAAACCGGGACCCTCCAG +
Preference number: 4 (lower is better)
Translates to: HSVGQSPGFCLPAVGDLGQSTKN*QTGTLQ
Trigger: CTGGAGGGTCCCGGTTTGTCAGTTCTTGGTGCTCTG...CCCCAGATCTCCCACTGCGGGGAGACAGAAGCCTGGACTCTGCCCCACGCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR GCA 90 bp CCCCTCATCCCAGGTTCCTTTCTTCAACCTCCGCCTGCCTCTGGGAACACAGAGGTGGCGGCTTCCTGCTaGAGGACAGGGCCGGGTCTG +
Preference number: 4 (lower is better)
Translates to: PLIPGSFLQPPPASGNTEVAASC*RTGPGL
Trigger: CAGACCCGGCCCTGTCCTGCAGCAGGAAGCCGCCAC...CTCTGTGTTCCCAGAGGCAGGCGGAGGTTGAAGAAAGGAACCTGGGATGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR GCA 90 bp AGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCAGAGACATCGTGGCGGCTTCCTGCTaGAGGACAGGGCCGGGTCTG +
Preference number: 4 (lower is better)
Translates to: RVWARATGRTVGICPRDIVAASC*RTGPGL
Trigger: CAGACCCGGCCCTGTCCTGCAGCAGGAAGCCGCCAC...GATGTCTCTGGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR GCA 90 bp AGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCAGCCCCTGGGTACCTGTaGCCATTGACCCCACCCTGG +
Preference number: 4 (lower is better)
Translates to: SSSESGLGQLVGQWGSAPAPGYL*PLTPPW
Trigger: CCAGGGTGGGGTCAATGGGCACAGGTACCCAGGGGC...TGGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR GCA 90 bp ACTGACAAACCGGGACCCTCCAGGGCCACAGCGTGGGGCAGAGTCCAGGCTTCTCGGCCCCTCTCGAAATaGACCGACCCCTTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: TDKPGPSRATAWGRVQASRPLSK*TDPFLL
Trigger: AAGCAGGAAGGGGTCGGTGCATTTCGAGAGGGGCCG...AGAAGCCTGGACTCTGCCCCACGCTGTGGCCCTGGAGGGTCCCGGTTTGTCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR GCA 90 bp GCCACAGCGTGGGGCAGAGTCCAGGCTTCTGTCTCCCCGCAGTGGGAGATCTGGAGGACAGTGGGGATCTaGCCCAGAGACATCTGTGGG +
Preference number: 4 (lower is better)
Translates to: ATAWGRVQASVSPQWEIWRTVGI*PRDICG
Trigger: CCCACAGATGTCTCTGGGGCAGATCCCCACTGTCCT...CCAGATCTCCCACTGCGGGGAGACAGAAGCCTGGACTCTGCCCCACGCTGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CCA 90 bp CTTCAACCTCCGCCTGCCTCTGGGAACACAGAGCACCAAGAACTGACAAACCGGGTGTTGGTAGGGGGCTaGGAGGGGTTCCCGGCCCCC +
Preference number: 4 (lower is better)
Translates to: LQPPPASGNTEHQELTNRVLVGG*EGFPAP
Trigger: GGGGGCCGGGAACCCCTCCCAGCCCCCTACCAACAC...CCGGTTTGTCAGTTCTTGGTGCTCTGTGTTCCCAGAGGCAGGCGGAGGTTGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CCA 90 bp GGTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCTGCTGGGGATAGGGTaGGCAGGGCTCCGACAGCTG +
Preference number: 4 (lower is better)
Translates to: GEQLRVWARATGRTVGICLLGIG*AGLRQL
Trigger: CAGCTGTCGGAGCCCTGCCCACCCTATCCCCAGCAG...GCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp AGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCAGAGCTGCTGGGGATAGGGTaGGCAGGGCTCCGACAGCTG +
Preference number: 4 (lower is better)
Translates to: SSESGLGQLVGQWGSAPELLGIG*AGLRQL
Trigger: CAGCTGTCGGAGCCCTGCCCACCCTATCCCCAGCAG...CTCTGGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp CTCCAGGGCCCAGGTGAAACCCCCAGGGGAGTTTCTGAGACTCTAGACTTGCCACCATTGACCCCACCCTaGTCCACGGCTGGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: LQGPGETPRGVSETLDLPPLTPP*STAGWP
Trigger: GGGCCAGCCAGCCGTGGACCAGGGTGGGGTCAATGG...TGGCAAGTCTAGAGTCTCAGAAACTCCCCTGGGGGTTTCACCTGGGCCCTGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CCA 90 bp GTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCAGAGACATCTGTCCATTGACCCCACCCTaGTCCACGGCTGGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: VWARATGRTVGICPRDICPLTPP*STAGWP
Trigger: GGGCCAGCCAGCCGTGGACCAGGGTGGGGTCAATGG...ACAGATGTCTCTGGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp GTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCATGGCCCCGTCACCTaGAGAGGGCCCAGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: VSSSESGLGQLVGQWGSAHGPVT*RGPREA
Trigger: GGCTTCTCTGGGCCCTCTCCAGGTGACGGGGCCATG...GGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp CTCCAGGGCCCAGGTGAAACCCCCAGGGGAGTTTCTGAGACTCTAGACTTGCCAACCCTTGGGGCCAAATaGCTGGGCGGGGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: LQGPGETPRGVSETLDLPTLGAK*LGGASQ
Trigger: CTGGCTGGCCCCGCCCAGCCATTTGGCCCCAAGGGT...TGGCAAGTCTAGAGTCTCAGAAACTCCCCTGGGGGTTTCACCTGGGCCCTGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CCA 90 bp GTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCAGAGACATCTGTACCCTTGGGGCCAAATaGCTGGGCGGGGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: VWARATGRTVGICPRDICTLGAK*LGGASQ
Trigger: CTGGCTGGCCCCGCCCAGCCATTTGGCCCCAAGGGT...ACAGATGTCTCTGGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp AGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCATCCCGGCCCCCTCCCTaGGATGTGAAGGAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: SSSESGLGQLVGQWGSAPSRPPP*DVKEWQ
Trigger: TTGCCACTCCTTCACATCTCAGGGAGGGGGCCGGGA...TGGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp GTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCAGAGACATCTGTGGTACCTGTGCCCATTaGCCCCACCCTGGTCCACGG +
Preference number: 4 (lower is better)
Translates to: VWARATGRTVGICPRDICGTCAH*PHPGPR
Trigger: CCGTGGACCAGGGTGGGGTCAATGGGCACAGGTACC...ACAGATGTCTCTGGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp GTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCGTCTGTTCCTGTTTaGTCACCACCCCCGCCCCTG +
Preference number: 4 (lower is better)
Translates to: VSSSESGLGQLVGQWGSAPSVPV*SPPPPL
Trigger: CAGGGGCGGGGGTGGTGATCAAACAGGAACAGACGG...GGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp GGCTTCTGTCTCCCCGCAGTGGGAGATCTGGGGAGCTCAGTGAACCTCCTCACCATCTGGGGAGCTCAGTaGACCTCCTCACCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GFCLPAVGDLGSSVNLLTIWGAQ*TSSPSC
Trigger: GCAGGAGGGTGAGGAGGTTCACTGAGCTCCCCAGAT...GGTGAGGAGGTTCACTGAGCTCCCCAGATCTCCCACTGCGGGGAGACAGAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR GCA 90 bp CTGCTTATACCCAGCACCCCTCATCCCAGGTTCCTTTCTTCAACCTCCGCCTGCGTGGCGGCTTCCTGCTaGAGGACAGGGCCGGGTCTG +
Preference number: 4 (lower is better)
Translates to: LLIPSTPHPRFLSSTSACVAASC*RTGPGL
Trigger: CAGACCCGGCCCTGTCCTGCAGCAGGAAGCCGCCAC...GCAGGCGGAGGTTGAAGAAAGGAACCTGGGATGAGGGGTGCTGGGTATAAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR GCA 90 bp TCCTTCCCAATGACTCCGGTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGAGTGGCGGCTTCCTaGTGCAGGACAGGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: SFPMTPVSSSESGLGQLVGVAAS*CRTGPG
Trigger: ACCCGGCCCTGTCCTGCAGCAGGAAGCCGCCACTCC...TACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCACCGGAGTCATTGGGAAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR GCA 90 bp ACCCCTCATCCCAGGTTCCTTTCTTCAACCTCCGCCTGCCTCTGGGAACACAGAGGAGTGGCGGCTTCCTaGTGCAGGACAGGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: TPHPRFLSSTSACLWEHRGVAAS*CRTGPG
Trigger: ACCCGGCCCTGTCCTGCAGCAGGAAGCCGCCACTCC...TCTGTGTTCCCAGAGGCAGGCGGAGGTTGAAGAAAGGAACCTGGGATGAGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR GCA 90 bp AGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCAGAGACATCGCCCCTGGGTACCTGTaGCCATTGACCCCACCCTGG +
Preference number: 4 (lower is better)
Translates to: RVWARATGRTVGICPRDIAPGYL*PLTPPW
Trigger: CCAGGGTGGGGTCAATGGGCACAGGTACCCAGGGGC...GATGTCTCTGGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR GCA 90 bp CAAGAACTGACAAACCGGGACCCTCCAGGGCCACAGCGTGGGGCAGAGTCCAGGAGGACAGTGGGGATCTaGCCCAGAGACATCTGTGGG +
Preference number: 4 (lower is better)
Translates to: QELTNRDPPGPQRGAESRRTVGI*PRDICG
Trigger: CCCACAGATGTCTCTGGGGCAGATCCCCACTGTCCT...CCTGGACTCTGCCCCACGCTGTGGCCCTGGAGGGTCCCGGTTTGTCAGTTCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CCA 90 bp ACAGAGCACCAAGAACTGACAAACCGGGACCCTCCAGGGCCACAGCGTGGGGCAATGGTGGTAGGGGAGTaGCGGCTTCCTGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: TEHQELTNRDPPGPQRGAMVVGE*RLPAAG
Trigger: TCCTGCAGCAGGAAGCCGCCACTCCCCTACCACCAT...TGCCCCACGCTGTGGCCCTGGAGGGTCCCGGTTTGTCAGTTCTTGGTGCTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CCA 90 bp GAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCATGGTGGTAGGGGAGTaGCGGCTTCCTGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: EQLRVWARATGRTVGICPMVVGE*RLPAAG
Trigger: TCCTGCAGCAGGAAGCCGCCACTCCCCTACCACCAT...GGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp CTTCCCAATGACTCCGGTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGCTGCTGGGGATAGGGTaGGCAGGGCTCCGACAGCTG +
Preference number: 4 (lower is better)
Translates to: LPNDSGEQLRVWARATGRLLGIG*AGLRQL
Trigger: CAGCTGTCGGAGCCCTGCCCACCCTATCCCCAGCAG...CCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCACCGGAGTCATTGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp AGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCATGGTCCACGGCTGGCTaGCCCGCCTGTTCATACAGG +
Preference number: 4 (lower is better)
Translates to: SSSESGLGQLVGQWGSAPWSTAG*PACSYR
Trigger: CCTGTATGAACAGGCGGGCCAGCCAGCCGTGGACCA...TGGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp GTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCACCCTGGTCCACGGCTaGCTGGCCCGCCTGTTCATA +
Preference number: 4 (lower is better)
Translates to: VSSSESGLGQLVGQWGSATLVHG*LARLFI
Trigger: TATGAACAGGCGGGCCAGCCAGCCGTGGACCAGGGT...GGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp TCCTTCCCAATGACTCCGGTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTACCATTGACCCCACCCTaGTCCACGGCTGGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: SFPMTPVSSSESGLGQLVPLTPP*STAGWP
Trigger: GGGCCAGCCAGCCGTGGACCAGGGTGGGGTCAATGG...TACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCACCGGAGTCATTGGGAAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp CTTCCCAATGACTCCGGTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGCATGGCCCCGTCACCTaGAGAGGGCCCAGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: LPNDSGEQLRVWARATGRHGPVT*RGPREA
Trigger: GGCTTCTCTGGGCCCTCTCCAGGTGACGGGGCCATG...CCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCACCGGAGTCATTGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp GGTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCGGATGCCCCAGAGCCTaGCGACCTCCTCAGGCTCAA +
Preference number: 4 (lower is better)
Translates to: GEQLRVWARATGRTVGICGCPRA*RPPQAQ
Trigger: TTGAGCCTGAGGAGGTCGCCAGGCTCTGGGGCATCC...GCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp AGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCAGGATGCCCCAGAGCCTaGCGACCTCCTCAGGCTCAA +
Preference number: 4 (lower is better)
Translates to: SSSESGLGQLVGQWGSAPGCPRA*RPPQAQ
Trigger: TTGAGCCTGAGGAGGTCGCCAGGCTCTGGGGCATCC...TGGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp CTGCTTATACCCAGCACCCCTCATCCCAGGTTCCTTTCTTCAACCTCCGCCTGCACCCTTGGGGCCAAATaGCTGGGCGGGGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: LLIPSTPHPRFLSSTSACTLGAK*LGGASQ
Trigger: CTGGCTGGCCCCGCCCAGCCATTTGGCCCCAAGGGT...GCAGGCGGAGGTTGAAGAAAGGAACCTGGGATGAGGGGTGCTGGGTATAAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CCA 90 bp GAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCAAGAGTAGCCACCCTTaGGGCCAAATGGCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: EQLRVWARATGRTVGICPKSSHP*GQMAGR
Trigger: CCGCCCAGCCATTTGGCCCCAAGGGTGGCTACTCTT...GGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp GGGCCACAGCGTGGGGCAGAGTCCAGGCTTCTGTCTCCCCGCAGTGGGAGATCTCAACTGGTAGGACAGTaGGGATCTGCCCCAGAGACA +
Preference number: 4 (lower is better)
Translates to: GPQRGAESRLLSPRSGRSQLVGQ*GSAPET
Trigger: TGTCTCTGGGGCAGATCCCCACTGTCCTACCAGTTG...AGATCTCCCACTGCGGGGAGACAGAAGCCTGGACTCTGCCCCACGCTGTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CCA 90 bp CAAGAACTGACAAACCGGGACCCTCCAGGGCCACAGCGTGGGGCAGAGTCCAGGGAGCAGCTCAGAGTCTaGGCTAGGGCAACTGGTAGG +
Preference number: 4 (lower is better)
Translates to: QELTNRDPPGPQRGAESREQLRV*ARATGR
Trigger: CCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTC...CCTGGACTCTGCCCCACGCTGTGGCCCTGGAGGGTCCCGGTTTGTCAGTTCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR TCA 90 bp GAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCCGGGCGATTTGCTGCTaGAGGTGTAGGGCACTTGCT +
Preference number: 4 (lower is better)
Translates to: EQLRVWARATGRTVGICPRAICC*RCRALA
Trigger: AGCAAGTGCCCTACACCTTCAGCAGCAAATCGCCCG...GGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000545089.5
ENST00000591713.5
CDS-3UTR TCA 90 bp CTCCAGGGCCCAGGTGAAACCCCCAGGGGAGTTTCTGAGACTCTAGACTTGCCATCCCGGCCCCCTCCCTaGGATGTGAAGGAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: LQGPGETPRGVSETLDLPSRPPP*DVKEWQ
Trigger: TTGCCACTCCTTCACATCTCAGGGAGGGGGCCGGGA...TGGCAAGTCTAGAGTCTCAGAAACTCCCCTGGGGGTTTCACCTGGGCCCTGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR TCA 90 bp CTTCCCAATGACTCCGGTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGTCCCGGCCCCCTCCCTaGGATGTGAAGGAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: LPNDSGEQLRVWARATGRSRPPP*DVKEWQ
Trigger: TTGCCACTCCTTCACATCTCAGGGAGGGGGCCGGGA...CCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCACCGGAGTCATTGGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp ACCCCTCATCCCAGGTTCCTTTCTTCAACCTCCGCCTGCCTCTGGGAACACAGAGGTACCTGTGCCCATTaGCCCCACCCTGGTCCACGG +
Preference number: 4 (lower is better)
Translates to: TPHPRFLSSTSACLWEHRGTCAH*PHPGPR
Trigger: CCGTGGACCAGGGTGGGGTCAATGGGCACAGGTACC...TCTGTGTTCCCAGAGGCAGGCGGAGGTTGAAGAAAGGAACCTGGGATGAGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR TCA 90 bp CTGCTTATACCCAGCACCCCTCATCCCAGGTTCCTTTCTTCAACCTCCGCCTGCCCTCCAGGGCCCAGGTaGAACCCCCAGGGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: LLIPSTPHPRFLSSTSACPPGPR*NPQGSF
Trigger: GAAACTCCCCTGGGGGTTTCACCTGGGCCCTGGAGG...GCAGGCGGAGGTTGAAGAAAGGAACCTGGGATGAGGGGTGCTGGGTATAAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR TCA 90 bp ACTGACAAACCGGGACCCTCCAGGGCCACAGCGTGGGGCAGAGTCCAGGCTTCTGACCTAGGAAGAAGCTaGGCTGAATTCCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: TDKPGPSRATAWGRVQASDLGRS*AEFLQG
Trigger: GCCCTGGAGGAATTCAGCTCAGCTTCTTCCTAGGTC...AGAAGCCTGGACTCTGCCCCACGCTGTGGCCCTGGAGGGTCCCGGTTTGTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR TCA 90 bp GGTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCATCTGGGGAGCTCAGTaGACCTCCTCACCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GEQLRVWARATGRTVGICIWGAQ*TSSPSC
Trigger: GCAGGAGGGTGAGGAGGTTCACTGAGCTCCCCAGAT...GCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR GCA 90 bp GCCACAGCGTGGGGCAGAGTCCAGGCTTCTGTCTCCCCGCAGTGGGAGATCTGGCAAATGTCCAGGGGCTaGTGGAAGACGGAGCTATGT +
Preference number: 4 (lower is better)
Translates to: ATAWGRVQASVSPQWEIWQMSRG*WKTELC
Trigger: ACATAGCTCCGTCTTCCAGCAGCCCCTGGACATTTG...CCAGATCTCCCACTGCGGGGAGACAGAAGCCTGGACTCTGCCCCACGCTGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR GCA 90 bp GGCTTCTGTCTCCCCGCAGTGGGAGATCTGGGGAGCTCAGTGAACCTCCTCACCAAGGCCACCAGAAATTaGCACAGCTGCAGGGCACCC +
Preference number: 4 (lower is better)
Translates to: GFCLPAVGDLGSSVNLLTKATRN*HSCRAP
Trigger: GGGTGCCCTGCAGCTGTGGCAATTTCTGGTGGCCTT...GGTGAGGAGGTTCACTGAGCTCCCCAGATCTCCCACTGCGGGGAGACAGAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR GCA 90 bp GAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCAGGACAGTGGGGATCTaGCCCAGAGACATCTGTGGG +
Preference number: 4 (lower is better)
Translates to: EQLRVWARATGRTVGICPRTVGI*PRDICG
Trigger: CCCACAGATGTCTCTGGGGCAGATCCCCACTGTCCT...GGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR GCA 90 bp GCCACAGCGTGGGGCAGAGTCCAGGCTTCTGTCTCCCCGCAGTGGGAGATCTGGACCTCCTCACCCTCCTaGCAGTATGAAGTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: ATAWGRVQASVSPQWEIWTSSPS*QYEVGK
Trigger: CTTCCCAACTTCATACTGGCAGGAGGGTGAGGAGGT...CCAGATCTCCCACTGCGGGGAGACAGAAGCCTGGACTCTGCCCCACGCTGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CCA 90 bp ACTGACAAACCGGGACCCTCCAGGGCCACAGCGTGGGGCAGAGTCCAGGCTTCTATGTCCAGGGGCTGCTaGAAGACGGAGCTATGTTCC +
Preference number: 4 (lower is better)
Translates to: TDKPGPSRATAWGRVQASMSRGC*KTELCS
Trigger: GGAACATAGCTCCGTCTTCCAGCAGCCCCTGGACAT...AGAAGCCTGGACTCTGCCCCACGCTGTGGCCCTGGAGGGTCCCGGTTTGTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CCA 90 bp GTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCAGAGACATCTGTACCCTGGTCCACGGCTaGCTGGCCCGCCTGTTCATA +
Preference number: 4 (lower is better)
Translates to: VWARATGRTVGICPRDICTLVHG*LARLFI
Trigger: TATGAACAGGCGGGCCAGCCAGCCGTGGACCAGGGT...ACAGATGTCTCTGGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp AGATCTGGGGAGCTCAGTGAACCTCCTCACCCTCCTGCCAGTATGAAGTTGGGACCATTGACCCCACCCTaGTCCACGGCTGGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: RSGELSEPPHPPASMKLGPLTPP*STAGWP
Trigger: GGGCCAGCCAGCCGTGGACCAGGGTGGGGTCAATGG...TCCCAACTTCATACTGGCAGGAGGGTGAGGAGGTTCACTGAGCTCCCCAGATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CCA 90 bp GGGCCACAGCGTGGGGCAGAGTCCAGGCTTCTGTCTCCCCGCAGTGGGAGATCTGAGAAGCCCTCTGTGTaGAGGTACATTGATGCGCAC +
Preference number: 4 (lower is better)
Translates to: GPQRGAESRLLSPRSGRSEKPSV*RYIDAH
Trigger: GTGCGCATCAATGTACCTCCACACAGAGGGCTTCTC...AGATCTCCCACTGCGGGGAGACAGAAGCCTGGACTCTGCCCCACGCTGTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CCA 90 bp TACCCAGCACCCCTCATCCCAGGTTCCTTTCTTCAACCTCCGCCTGCCTCTGGGAAGAGTAGCCACCCTTaGGGCCAAATGGCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: YPAPLIPGSFLQPPPASGKSSHP*GQMAGR
Trigger: CCGCCCAGCCATTTGGCCCCAAGGGTGGCTACTCTT...CCCAGAGGCAGGCGGAGGTTGAAGAAAGGAACCTGGGATGAGGGGTGCTGGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CCA 90 bp GTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCAGGGGGAACAGCCGCTaGGGGCTAGTAAGAGTAGCC +
Preference number: 4 (lower is better)
Translates to: VSSSESGLGQLVGQWGSARGNSR*GLVRVA
Trigger: GGCTACTCTTACTAGCCCCCAGCGGCTGTTCCCCCT...GGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp GGACCCTCCAGGGCCACAGCGTGGGGCAGAGTCCAGGCTTCTGTCTCCCCGCAGAACTCTTGTTCTCTGTaGTTGGGGAAAAGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: GPSRATAWGRVQASVSPQNSCSL*LGKRCG
Trigger: CCCACACCTTTTCCCCAACCACAGAGAACAAGAGTT...CTGCGGGGAGACAGAAGCCTGGACTCTGCCCCACGCTGTGGCCCTGGAGGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CCA 90 bp ACAGAGCACCAAGAACTGACAAACCGGGACCCTCCAGGGCCACAGCGTGGGGCAACCTCCGCCTGCCTCTaGGAACACAGAGCACCAAGA +
Preference number: 4 (lower is better)
Translates to: TEHQELTNRDPPGPQRGATSACL*EHRAPR
Trigger: TCTTGGTGCTCTGTGTTCCCAGAGGCAGGCGGAGGT...TGCCCCACGCTGTGGCCCTGGAGGGTCCCGGTTTGTCAGTTCTTGGTGCTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CCA 90 bp CACAGCGTGGGGCAGAGTCCAGGCTTCTGTCTCCCCGCAGTGGGAGATCTGGGGCAGATGTGGTGGAGGTaGAAGTACAAACCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: HSVGQSPGFCLPAVGDLGQMWWR*KYKPRP
Trigger: AGGCCTGGGTTTGTACTTCCACCTCCACCACATCTG...CCCCAGATCTCCCACTGCGGGGAGACAGAAGCCTGGACTCTGCCCCACGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR TCA 90 bp GGGGAGCTCAGTGAACCTCCTCACCCTCCTGCCAGTATGAAGTTGGGAAGCGCCTCACTGTCTGGTACCTaGGCTTCAGCGAGCCACGTC +
Preference number: 4 (lower is better)
Translates to: GELSEPPHPPASMKLGSASLSGT*ASASHV
Trigger: GACGTGGCTCGCTGAAGCTCAGGTACCAGACAGTGA...GGCGCTTCCCAACTTCATACTGGCAGGAGGGTGAGGAGGTTCACTGAGCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR TCA 90 bp CTGCTTATACCCAGCACCCCTCATCCCAGGTTCCTTTCTTCAACCTCCGCCTGCTCCCGGCCCCCTCCCTaGGATGTGAAGGAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: LLIPSTPHPRFLSSTSACSRPPP*DVKEWQ
Trigger: TTGCCACTCCTTCACATCTCAGGGAGGGGGCCGGGA...GCAGGCGGAGGTTGAAGAAAGGAACCTGGGATGAGGGGTGCTGGGTATAAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR TCA 90 bp TCCTTCCCAATGACTCCGGTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTATCCCGGCCCCCTCCCTaGGATGTGAAGGAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: SFPMTPVSSSESGLGQLVSRPPP*DVKEWQ
Trigger: TTGCCACTCCTTCACATCTCAGGGAGGGGGCCGGGA...TACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCACCGGAGTCATTGGGAAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp AGATCTGGGGAGCTCAGTGAACCTCCTCACCCTCCTGCCAGTATGAAGTTGGGAGGTACCTGTGCCCATTaGCCCCACCCTGGTCCACGG +
Preference number: 4 (lower is better)
Translates to: RSGELSEPPHPPASMKLGGTCAH*PHPGPR
Trigger: CCGTGGACCAGGGTGGGGTCAATGGGCACAGGTACC...TCCCAACTTCATACTGGCAGGAGGGTGAGGAGGTTCACTGAGCTCCCCAGATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR TCA 90 bp GGGGAGCTCAGTGAACCTCCTCACCCTCCTGCCAGTATGAAGTTGGGAAGCGCCTTGATGCGCACCCGGTaGCATCTGAGTCGTAGGCGA +
Preference number: 4 (lower is better)
Translates to: GELSEPPHPPASMKLGSALMRTR*HLSRRR
Trigger: TCGCCTACGACTCAGATGTCACCGGGTGCGCATCAA...GGCGCTTCCCAACTTCATACTGGCAGGAGGGTGAGGAGGTTCACTGAGCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR TCA 90 bp GAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCTGTGTGGAGGTACATTaGTGCGCACCCGGTGACATC +
Preference number: 4 (lower is better)
Translates to: EQLRVWARATGRTVGICPCVEVH*CAPGDI
Trigger: GATGTCACCGGGTGCGCATCAATGTACCTCCACACA...GGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp GTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCTGTGTCCTCCTCACTaGCAGGCCGGTCAAACTCAG +
Preference number: 4 (lower is better)
Translates to: VSSSESGLGQLVGQWGSALCPPH*QAGQTQ
Trigger: CTGAGTTTGACCGGCCTGTCAGTGAGGAGGACACAG...GGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR GCA 90 bp GGACCCTCCAGGGCCACAGCGTGGGGCAGAGTCCAGGCTTCTGTCTCCCCGCAGGGATCATGGTATTCTTaGTTAAAGCTCTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: GPSRATAWGRVQASVSPQGSWYS*LKLCWG
Trigger: TCCCCAGCAGAGCTTTAAGCAAGAATACCATGATCC...CTGCGGGGAGACAGAAGCCTGGACTCTGCCCCACGCTGTGGCCCTGGAGGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR GCA 90 bp AGATCTGGGGAGCTCAGTGAACCTCCTCACCCTCCTGCCAGTATGAAGTTGGGAGCCCCTGGGTACCTGTaGCCATTGACCCCACCCTGG +
Preference number: 4 (lower is better)
Translates to: RSGELSEPPHPPASMKLGAPGYL*PLTPPW
Trigger: CCAGGGTGGGGTCAATGGGCACAGGTACCCAGGGGC...TCCCAACTTCATACTGGCAGGAGGGTGAGGAGGTTCACTGAGCTCCCCAGATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR GCA 90 bp CTCCAGGGCCCAGGTGAAACCCCCAGGGGAGTTTCTGAGACTCTAGACTTGCCACGGCCCCTCTCGAAATaGACCGACCCCTTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: LQGPGETPRGVSETLDLPRPLSK*TDPFLL
Trigger: AAGCAGGAAGGGGTCGGTGCATTTCGAGAGGGGCCG...TGGCAAGTCTAGAGTCTCAGAAACTCCCCTGGGGGTTTCACCTGGGCCCTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CCA 90 bp AGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCAGAGGGGGGTCATAGGCACTaGAGTAAAGGCACTGCTCGC +
Preference number: 4 (lower is better)
Translates to: SSESGLGQLVGQWGSAPEGGHRH*SKGTAR
Trigger: GCGAGCAGTGCCTTTACTCCAGTGCCTATGACCCCC...CTCTGGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp GAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCATGTCCAGGGGCTGCTaGAAGACGGAGCTATGTTCC +
Preference number: 4 (lower is better)
Translates to: EQLRVWARATGRTVGICPMSRGC*KTELCS
Trigger: GGAACATAGCTCCGTCTTCCAGCAGCCCCTGGACAT...GGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp TCCTTCCCAATGACTCCGGTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTATGGTCCACGGCTGGCTaGCCCGCCTGTTCATACAGG +
Preference number: 4 (lower is better)
Translates to: SFPMTPVSSSESGLGQLVWSTAG*PACSYR
Trigger: CCTGTATGAACAGGCGGGCCAGCCAGCCGTGGACCA...TACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCACCGGAGTCATTGGGAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp AGATCTGGGGAGCTCAGTGAACCTCCTCACCCTCCTGCCAGTATGAAGTTGGGACATGGCCCCGTCACCTaGAGAGGGCCCAGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: RSGELSEPPHPPASMKLGHGPVT*RGPREA
Trigger: GGCTTCTCTGGGCCCTCTCCAGGTGACGGGGCCATG...TCCCAACTTCATACTGGCAGGAGGGTGAGGAGGTTCACTGAGCTCCCCAGATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CCA 90 bp ACAGAGCACCAAGAACTGACAAACCGGGACCCTCCAGGGCCACAGCGTGGGGCACTCAGCCTTGAGAGCTaGACGCTGATTGTCCGGGAA +
Preference number: 4 (lower is better)
Translates to: TEHQELTNRDPPGPQRGALSLES*TLIVRE
Trigger: TTCCCGGACAATCAGCGTCCAGCTCTCAAGGCTGAG...TGCCCCACGCTGTGGCCCTGGAGGGTCCCGGTTTGTCAGTTCTTGGTGCTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CCA 90 bp GAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCCTCAGCCTTGAGAGCTaGACGCTGATTGTCCGGGAA +
Preference number: 4 (lower is better)
Translates to: EQLRVWARATGRTVGICPLSLES*TLIVRE
Trigger: TTCCCGGACAATCAGCGTCCAGCTCTCAAGGCTGAG...GGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp GTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCAGAGACATCTGTAGGGGGAACAGCCGCTaGGGGCTAGTAAGAGTAGCC +
Preference number: 4 (lower is better)
Translates to: VWARATGRTVGICPRDICRGNSR*GLVRVA
Trigger: GGCTACTCTTACTAGCCCCCAGCGGCTGTTCCCCCT...ACAGATGTCTCTGGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp ACTGACAAACCGGGACCCTCCAGGGCCACAGCGTGGGGCAGAGTCCAGGCTTCTCACGTCTCCTGGAAGTaGCTTAGATCCTGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: TDKPGPSRATAWGRVQASHVSWK*LRSWKR
Trigger: TCTCTTCCAGGATCTAAGTCACTTCCAGGAGACGTG...AGAAGCCTGGACTCTGCCCCACGCTGTGGCCCTGGAGGGTCCCGGTTTGTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR TCA 90 bp CTTCCCAATGACTCCGGTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGTCACTGTCTGGTACCTaGGCTTCAGCGAGCCACGTC +
Preference number: 4 (lower is better)
Translates to: LPNDSGEQLRVWARATGRSLSGT*ASASHV
Trigger: GACGTGGCTCGCTGAAGCTCAGGTACCAGACAGTGA...CCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCACCGGAGTCATTGGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp GTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCAGAGACATCTGTTCACTGTCTGGTACCTaGGCTTCAGCGAGCCACGTC +
Preference number: 4 (lower is better)
Translates to: VWARATGRTVGICPRDICSLSGT*ASASHV
Trigger: GACGTGGCTCGCTGAAGCTCAGGTACCAGACAGTGA...ACAGATGTCTCTGGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp AGATCTGGGGAGCTCAGTGAACCTCCTCACCCTCCTGCCAGTATGAAGTTGGGATCCCGGCCCCCTCCCTaGGATGTGAAGGAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: RSGELSEPPHPPASMKLGSRPPP*DVKEWQ
Trigger: TTGCCACTCCTTCACATCTCAGGGAGGGGGCCGGGA...TCCCAACTTCATACTGGCAGGAGGGTGAGGAGGTTCACTGAGCTCCCCAGATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR TCA 90 bp CCTCCTGCCAGTATGAAGTTGGGAAGCGCCTTCTCTGTCCCCCAGAACAGAACACCGTCTGTTCCTGTTTaGTCACCACCCCCGCCCCTG +
Preference number: 4 (lower is better)
Translates to: PPASMKLGSAFSVPQNRTPSVPV*SPPPPL
Trigger: CAGGGGCGGGGGTGGTGATCAAACAGGAACAGACGG...TGTTCTGTTCTGGGGGACAGAGAAGGCGCTTCCCAACTTCATACTGGCAGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR TCA 90 bp AGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCAGAGACATCTTGATGCGCACCCGGTaGCATCTGAGTCGTAGGCGA +
Preference number: 4 (lower is better)
Translates to: RVWARATGRTVGICPRDILMRTR*HLSRRR
Trigger: TCGCCTACGACTCAGATGTCACCGGGTGCGCATCAA...GATGTCTCTGGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp CTCCAGGGCCCAGGTGAAACCCCCAGGGGAGTTTCTGAGACTCTAGACTTGCCACTGTGTCCTCCTCACTaGCAGGCCGGTCAAACTCAG +
Preference number: 4 (lower is better)
Translates to: LQGPGETPRGVSETLDLPLCPPH*QAGQTQ
Trigger: CTGAGTTTGACCGGCCTGTCAGTGAGGAGGACACAG...TGGCAAGTCTAGAGTCTCAGAAACTCCCCTGGGGGTTTCACCTGGGCCCTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR TCA 90 bp AGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCAGAGACATCCTGTGTCCTCCTCACTaGCAGGCCGGTCAAACTCAG +
Preference number: 4 (lower is better)
Translates to: RVWARATGRTVGICPRDILCPPH*QAGQTQ
Trigger: CTGAGTTTGACCGGCCTGTCAGTGAGGAGGACACAG...GATGTCTCTGGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp GAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCCCCCAGGGGAGTTTCTaGGACTCTAGACTTGCCATT +
Preference number: 4 (lower is better)
Translates to: EQLRVWARATGRTVGICPPQGSF*DSRLAI
Trigger: AATGGCAAGTCTAGAGTCTCAGAAACTCCCCTGGGG...GGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTC
59% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
CDS-3UTR GCA 90 bp CTTTCTTCAACCTCCGCCTGCCTCTGGGAACACAGAGCACCAAGAACTGACAAAGGAGTGGCGGCTTCCTaGTGCAGGACAGGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: LSSTSACLWEHRAPRTDKGVAAS*CRTGPG
Trigger: ACCCGGCCCTGTCCTGCAGCAGGAAGCCGCCACTCC...TTTGTCAGTTCTTGGTGCTCTGTGTTCCCAGAGGCAGGCGGAGGTTGAAGAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR GCA 90 bp CCCCTCATCCCAGGTTCCTTTCTTCAACCTCCGCCTGCCTCTGGGAACACAGAGCTCAGGAAATTCCGTTaGTCTGCCCGGGGAAAGGGC +
Preference number: 4 (lower is better)
Translates to: PLIPGSFLQPPPASGNTELRKFR*SARGKG
Trigger: GCCCTTTCCCCGGGCAGAGCAACGGAATTTCCTGAG...CTCTGTGTTCCCAGAGGCAGGCGGAGGTTGAAGAAAGGAACCTGGGATGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR GCA 90 bp CTTCCCAATGACTCCGGTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGCTCAGGAAATTCCGTTaGTCTGCCCGGGGAAAGGGC +
Preference number: 4 (lower is better)
Translates to: LPNDSGEQLRVWARATGRLRKFR*SARGKG
Trigger: GCCCTTTCCCCGGGCAGAGCAACGGAATTTCCTGAG...CCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCACCGGAGTCATTGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR GCA 90 bp TCCTTCCCAATGACTCCGGTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTACGGCCCCTCTCGAAATaGACCGACCCCTTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: SFPMTPVSSSESGLGQLVRPLSK*TDPFLL
Trigger: AAGCAGGAAGGGGTCGGTGCATTTCGAGAGGGGCCG...TACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCACCGGAGTCATTGGGAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR GCA 90 bp CCCCTCATCCCAGGTTCCTTTCTTCAACCTCCGCCTGCCTCTGGGAACACAGAGAAGGCCACCAGAAATTaGCACAGCTGCAGGGCACCC +
Preference number: 4 (lower is better)
Translates to: PLIPGSFLQPPPASGNTEKATRN*HSCRAP
Trigger: GGGTGCCCTGCAGCTGTGGCAATTTCTGGTGGCCTT...CTCTGTGTTCCCAGAGGCAGGCGGAGGTTGAAGAAAGGAACCTGGGATGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR GCA 90 bp GTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCAGAGACATCTGTAAGGCCACCAGAAATTaGCACAGCTGCAGGGCACCC +
Preference number: 4 (lower is better)
Translates to: VWARATGRTVGICPRDICKATRN*HSCRAP
Trigger: GGGTGCCCTGCAGCTGTGGCAATTTCTGGTGGCCTT...ACAGATGTCTCTGGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp TCCTTCCCAATGACTCCGGTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAATGGTGGTAGGGGAGTaGCGGCTTCCTGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: SFPMTPVSSSESGLGQLVMVVGE*RLPAAG
Trigger: TCCTGCAGCAGGAAGCCGCCACTCCCCTACCACCAT...TACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCACCGGAGTCATTGGGAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp GGTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCATGTCCAGGGGCTGCTaGAAGACGGAGCTATGTTCC +
Preference number: 4 (lower is better)
Translates to: GEQLRVWARATGRTVGICMSRGC*KTELCS
Trigger: GGAACATAGCTCCGTCTTCCAGCAGCCCCTGGACAT...GCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp CCCAACACCAGATTCATTTATATGTACACAGGGCAGCACCCACCTGCGGCAGGGTGGTCCACGGCTGGCTaGCCCGCCTGTTCATACAGG +
Preference number: 4 (lower is better)
Translates to: PNTRFIYMYTGQHPPAAGWSTAG*PACSYR
Trigger: CCTGTATGAACAGGCGGGCCAGCCAGCCGTGGACCA...CCCTGCCGCAGGTGGGTGCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp GAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCGAGAAGCCCTCTGTGTaGAGGTACATTGATGCGCAC +
Preference number: 4 (lower is better)
Translates to: EQLRVWARATGRTVGICPEKPSV*RYIDAH
Trigger: GTGCGCATCAATGTACCTCCACACAGAGGGCTTCTC...GGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp CCCAACACCAGATTCATTTATATGTACACAGGGCAGCACCCACCTGCGGCAGGGGGATGCCCCAGAGCCTaGCGACCTCCTCAGGCTCAA +
Preference number: 4 (lower is better)
Translates to: PNTRFIYMYTGQHPPAAGGCPRA*RPPQAQ
Trigger: TTGAGCCTGAGGAGGTCGCCAGGCTCTGGGGCATCC...CCCTGCCGCAGGTGGGTGCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp TTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCACCCACCTGCGGCAACCCTTGGGGCCAAATaGCTGGGCGGGGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: FPNTRFIYMYTGQHPPAATLGAK*LGGASQ
Trigger: CTGGCTGGCCCCGCCCAGCCATTTGGCCCCAAGGGT...TGCCGCAGGTGGGTGCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp CTGCTTATACCCAGCACCCCTCATCCCAGGTTCCTTTCTTCAACCTCCGCCTGCAAGAGTAGCCACCCTTaGGGCCAAATGGCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: LLIPSTPHPRFLSSTSACKSSHP*GQMAGR
Trigger: CCGCCCAGCCATTTGGCCCCAAGGGTGGCTACTCTT...GCAGGCGGAGGTTGAAGAAAGGAACCTGGGATGAGGGGTGCTGGGTATAAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CCA 90 bp TCCTTCCCAATGACTCCGGTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAAAGAGTAGCCACCCTTaGGGCCAAATGGCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: SFPMTPVSSSESGLGQLVKSSHP*GQMAGR
Trigger: CCGCCCAGCCATTTGGCCCCAAGGGTGGCTACTCTT...TACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCACCGGAGTCATTGGGAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp GTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCAACTGGTAGGACAGTaGGGATCTGCCCCAGAGACA +
Preference number: 4 (lower is better)
Translates to: VSSSESGLGQLVGQWGSAQLVGQ*GSAPET
Trigger: TGTCTCTGGGGCAGATCCCCACTGTCCTACCAGTTG...GGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp GTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCAGAGACATCTGTGAGCAGCTCAGAGTCTaGGCTAGGGCAACTGGTAGG +
Preference number: 4 (lower is better)
Translates to: VWARATGRTVGICPRDICEQLRV*ARATGR
Trigger: CCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTC...ACAGATGTCTCTGGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp CTTCCCAATGACTCCGGTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACCTCCGCCTGCCTCTaGGAACACAGAGCACCAAGA +
Preference number: 4 (lower is better)
Translates to: LPNDSGEQLRVWARATGRTSACL*EHRAPR
Trigger: TCTTGGTGCTCTGTGTTCCCAGAGGCAGGCGGAGGT...CCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCACCGGAGTCATTGGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CCA 90 bp CCCTCATCCCAGGTTCCTTTCTTCAACCTCCGCCTGCCTCTGGGAACACAGAGCACCTCCGCCTGCCTCTaGGAACACAGAGCACCAAGA +
Preference number: 4 (lower is better)
Translates to: PSSQVPFFNLRLPLGTQSTSACL*EHRAPR
Trigger: TCTTGGTGCTCTGTGTTCCCAGAGGCAGGCGGAGGT...GCTCTGTGTTCCCAGAGGCAGGCGGAGGTTGAAGAAAGGAACCTGGGATGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR TCA 90 bp ACAGAGCACCAAGAACTGACAAACCGGGACCCTCCAGGGCCACAGCGTGGGGCACACGTCTCCTGGAAGTaGCTTAGATCCTGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: TEHQELTNRDPPGPQRGAHVSWK*LRSWKR
Trigger: TCTCTTCCAGGATCTAAGTCACTTCCAGGAGACGTG...TGCCCCACGCTGTGGCCCTGGAGGGTCCCGGTTTGTCAGTTCTTGGTGCTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR TCA 90 bp TCATCCCAGGTTCCTTTCTTCAACCTCCGCCTGCCTCTGGGAACACAGAGCACCTCACTGTCTGGTACCTaGGCTTCAGCGAGCCACGTC +
Preference number: 4 (lower is better)
Translates to: SSQVPFFNLRLPLGTQSTSLSGT*ASASHV
Trigger: GACGTGGCTCGCTGAAGCTCAGGTACCAGACAGTGA...GGTGCTCTGTGTTCCCAGAGGCAGGCGGAGGTTGAAGAAAGGAACCTGGGATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR TCA 90 bp AGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCAGAGACATCCCCCTCCCTGAGATGTaGAGGAGTGGCAAATGTCCA +
Preference number: 4 (lower is better)
Translates to: RVWARATGRTVGICPRDIPLPEM*RSGKCP
Trigger: TGGACATTTGCCACTCCTTCACATCTCAGGGAGGGG...GATGTCTCTGGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp GTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCAGAGACATCTGTTGTGTGGAGGTACATTaGTGCGCACCCGGTGACATC +
Preference number: 4 (lower is better)
Translates to: VWARATGRTVGICPRDICCVEVH*CAPGDI
Trigger: GATGTCACCGGGTGCGCATCAATGTACCTCCACACA...ACAGATGTCTCTGGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp CTCCAGGGCCCAGGTGAAACCCCCAGGGGAGTTTCTGAGACTCTAGACTTGCCATTGAGAGCTGGACGCTaGTTGTCCGGGAAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: LQGPGETPRGVSETLDLPLRAGR*LSGKAK
Trigger: TTTGGCCTTCCCGGACAATCAGCGTCCAGCTCTCAA...TGGCAAGTCTAGAGTCTCAGAAACTCCCCTGGGGGTTTCACCTGGGCCCTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR TCA 90 bp AGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCAGGTCAAACTCAGCCTTaGGAGCTGGACGCTGATTGT +
Preference number: 4 (lower is better)
Translates to: SSSESGLGQLVGQWGSAPGQTQP*ELDADC
Trigger: ACAATCAGCGTCCAGCTCTCAAGGCTGAGTTTGACC...TGGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp GTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCGGTCAAACTCAGCCTTaGGAGCTGGACGCTGATTGT +
Preference number: 4 (lower is better)
Translates to: VSSSESGLGQLVGQWGSAGQTQP*ELDADC
Trigger: ACAATCAGCGTCCAGCTCTCAAGGCTGAGTTTGACC...GGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp GAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCTCTGTGGGTTTCAGATaGAGGTTTCCCCAACACCAG +
Preference number: 4 (lower is better)
Translates to: EQLRVWARATGRTVGICPSVGFR*RFPQHQ
Trigger: CTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGA...GGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp AGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCACCCCAGGGGAGTTTCTaGGACTCTAGACTTGCCATT +
Preference number: 4 (lower is better)
Translates to: SSSESGLGQLVGQWGSAPPQGSF*DSRLAI
Trigger: AATGGCAAGTCTAGAGTCTCAGAAACTCCCCTGGGG...TGGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
CDS-3UTR TCA 90 bp CCAGGTTCCTTTCTTCAACCTCCGCCTGCCTCTGGGAACACAGAGCACCAAGAAATCTGGGGAGCTCAGTaGACCTCCTCACCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: PGSFLQPPPASGNTEHQEIWGAQ*TSSPSC
Trigger: GCAGGAGGGTGAGGAGGTTCACTGAGCTCCCCAGAT...TTCTTGGTGCTCTGTGTTCCCAGAGGCAGGCGGAGGTTGAAGAAAGGAACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR GCA 90 bp GAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCGCACCGACCCCTTCCTaGTTGATGTCTCCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: EQLRVWARATGRTVGICPAPTPS*LMSPSN
Trigger: ATTTGAAGGAGACATCAAGCAGGAAGGGGTCGGTGC...GGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR GCA 90 bp CCCAACACCAGATTCATTTATATGTACACAGGGCAGCACCCACCTGCGGCAGGGCGGCCCCTCTCGAAATaGACCGACCCCTTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: PNTRFIYMYTGQHPPAAGRPLSK*TDPFLL
Trigger: AAGCAGGAAGGGGTCGGTGCATTTCGAGAGGGGCCG...CCCTGCCGCAGGTGGGTGCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR GCA 90 bp TCCTTCCCAATGACTCCGGTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAAGGACAGTGGGGATCTaGCCCAGAGACATCTGTGGG +
Preference number: 4 (lower is better)
Translates to: SFPMTPVSSSESGLGQLVRTVGI*PRDICG
Trigger: CCCACAGATGTCTCTGGGGCAGATCCCCACTGTCCT...TACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCACCGGAGTCATTGGGAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp TCTTCAACCTCCGCCTGCCTCTGGGAACACAGAGCACCAAGAACTGACAAACCGATGGTGGTAGGGGAGTaGCGGCTTCCTGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: SSTSACLWEHRAPRTDKPMVVGE*RLPAAG
Trigger: TCCTGCAGCAGGAAGCCGCCACTCCCCTACCACCAT...CGGTTTGTCAGTTCTTGGTGCTCTGTGTTCCCAGAGGCAGGCGGAGGTTGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CCA 90 bp CCCCAGAGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTGTGTTGGTAGGGGGCTaGGAGGGGTTCCCGGCCCCC +
Preference number: 4 (lower is better)
Translates to: PQRHLWVSDEGFPNTRFIVLVGG*EGFPAP
Trigger: GGGGGCCGGGAACCCCTCCCAGCCCCCTACCAACAC...AATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCTCTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp AGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCAGAGGAGAAGCCCTCTGTGTaGAGGTACATTGATGCGCAC +
Preference number: 4 (lower is better)
Translates to: SSESGLGQLVGQWGSAPEEKPSV*RYIDAH
Trigger: GTGCGCATCAATGTACCTCCACACAGAGGGCTTCTC...CTCTGGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp GGTTTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCACCCACCTGCGCATGGCCCCGTCACCTaGAGAGGGCCCAGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: GFPNTRFIYMYTGQHPPAHGPVT*RGPREA
Trigger: GGCTTCTCTGGGCCCTCTCCAGGTGACGGGGCCATG...CGCAGGTGGGTGCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp CTCCAGGGCCCAGGTGAAACCCCCAGGGGAGTTTCTGAGACTCTAGACTTGCCACTCAGCCTTGAGAGCTaGACGCTGATTGTCCGGGAA +
Preference number: 4 (lower is better)
Translates to: LQGPGETPRGVSETLDLPLSLES*TLIVRE
Trigger: TTCCCGGACAATCAGCGTCCAGCTCTCAAGGCTGAG...TGGCAAGTCTAGAGTCTCAGAAACTCCCCTGGGGGTTTCACCTGGGCCCTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CCA 90 bp AGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCAGAGACATCCTCAGCCTTGAGAGCTaGACGCTGATTGTCCGGGAA +
Preference number: 4 (lower is better)
Translates to: RVWARATGRTVGICPRDILSLES*TLIVRE
Trigger: TTCCCGGACAATCAGCGTCCAGCTCTCAAGGCTGAG...GATGTCTCTGGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp TCTTCAACCTCCGCCTGCCTCTGGGAACACAGAGCACCAAGAACTGACAAACCGAAGAGTAGCCACCCTTaGGGCCAAATGGCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: SSTSACLWEHRAPRTDKPKSSHP*GQMAGR
Trigger: CCGCCCAGCCATTTGGCCCCAAGGGTGGCTACTCTT...CGGTTTGTCAGTTCTTGGTGCTCTGTGTTCCCAGAGGCAGGCGGAGGTTGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CCA 90 bp CTTCCCAATGACTCCGGTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGCAACTGGTAGGACAGTaGGGATCTGCCCCAGAGACA +
Preference number: 4 (lower is better)
Translates to: LPNDSGEQLRVWARATGRQLVGQ*GSAPET
Trigger: TGTCTCTGGGGCAGATCCCCACTGTCCTACCAGTTG...CCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCACCGGAGTCATTGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp TCCTTCCCAATGACTCCGGTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGAGCAGCTCAGAGTCTaGGCTAGGGCAACTGGTAGG +
Preference number: 4 (lower is better)
Translates to: SFPMTPVSSSESGLGQLVEQLRV*ARATGR
Trigger: CCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTC...TACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCACCGGAGTCATTGGGAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp TCATCCCAGGTTCCTTTCTTCAACCTCCGCCTGCCTCTGGGAACACAGAGCACCAGGCAAAGGGTCCCTTaGAGCAGGAACCCATCCCTC +
Preference number: 4 (lower is better)
Translates to: SSQVPFFNLRLPLGTQSTRQRVP*SRNPSL
Trigger: GAGGGATGGGTTCCTGCTCCAAGGGACCCTTTGCCT...GGTGCTCTGTGTTCCCAGAGGCAGGCGGAGGTTGAAGAAAGGAACCTGGGATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CCA 90 bp GGTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCGTCTGGCAGATGTGGTaGAGGTGGAAGTACAAACCC +
Preference number: 4 (lower is better)
Translates to: GEQLRVWARATGRTVGICVWQMW*RWKYKP
Trigger: GGGTTTGTACTTCCACCTCCACCACATCTGCCAGAC...GCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CCA 90 bp GTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCGTCTGGCAGATGTGGTaGAGGTGGAAGTACAAACCC +
Preference number: 4 (lower is better)
Translates to: VSSSESGLGQLVGQWGSAVWQMW*RWKYKP
Trigger: GGGTTTGTACTTCCACCTCCACCACATCTGCCAGAC...GGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CCA 90 bp ACTGACAAACCGGGACCCTCCAGGGCCACAGCGTGGGGCAGAGTCCAGGCTTCTAAGGTCTGGCAGATGTaGTGGAGGTGGAAGTACAAA +
Preference number: 4 (lower is better)
Translates to: TDKPGPSRATAWGRVQASKVWQM*WRWKYK
Trigger: TTTGTACTTCCACCTCCACCACATCTGCCAGACCTT...AGAAGCCTGGACTCTGCCCCACGCTGTGGCCCTGGAGGGTCCCGGTTTGTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR TCA 90 bp CCTCCTGCCAGTATGAAGTTGGGAAGCGCCTTCTCTGTCCCCCAGAACAGAACACGGGCGATTTGCTGCTaGAGGTGTAGGGCACTTGCT +
Preference number: 4 (lower is better)
Translates to: PPASMKLGSAFSVPQNRTRAICC*RCRALA
Trigger: AGCAAGTGCCCTACACCTTCAGCAGCAAATCGCCCG...TGTTCTGTTCTGGGGGACAGAGAAGGCGCTTCCCAACTTCATACTGGCAGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319349.10
ENST00000393664.6
CDS-3UTR TCA 90 bp CCCAACACCAGATTCATTTATATGTACACAGGGCAGCACCCACCTGCGGCAGGGCGGGCGATTTGCTGCTaGAGGTGTAGGGCACTTGCT +
Preference number: 4 (lower is better)
Translates to: PNTRFIYMYTGQHPPAAGRAICC*RCRALA
Trigger: AGCAAGTGCCCTACACCTTCAGCAGCAAATCGCCCG...CCCTGCCGCAGGTGGGTGCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000545089.5
ENST00000591713.5
CDS-3UTR TCA 90 bp TCTGCTTATACCCAGCACCCCTCATCCCAGGTTCCTTTCTTCAACCTCCGCCTGTCACTGTCTGGTACCTaGGCTTCAGCGAGCCACGTC +
Preference number: 4 (lower is better)
Translates to: SAYTQHPSSQVPFFNLRLSLSGT*ASASHV
Trigger: GACGTGGCTCGCTGAAGCTCAGGTACCAGACAGTGA...CAGGCGGAGGTTGAAGAAAGGAACCTGGGATGAGGGGTGCTGGGTATAAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR TCA 90 bp CTTCAACCTCCGCCTGCCTCTGGGAACACAGAGCACCAAGAACTGACAAACCGGCCCCTCCCTGAGATGTaGAGGAGTGGCAAATGTCCA +
Preference number: 4 (lower is better)
Translates to: LQPPPASGNTEHQELTNRPLPEM*RSGKCP
Trigger: TGGACATTTGCCACTCCTTCACATCTCAGGGAGGGG...CCGGTTTGTCAGTTCTTGGTGCTCTGTGTTCCCAGAGGCAGGCGGAGGTTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR TCA 90 bp TTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCACCCACCTGCGGCACCGTCTGTTCCTGTTTaGTCACCACCCCCGCCCCTG +
Preference number: 4 (lower is better)
Translates to: FPNTRFIYMYTGQHPPAAPSVPV*SPPPPL
Trigger: CAGGGGCGGGGGTGGTGATCAAACAGGAACAGACGG...TGCCGCAGGTGGGTGCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp TCCTTCCCAATGACTCCGGTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTATGTGTGGAGGTACATTaGTGCGCACCCGGTGACATC +
Preference number: 4 (lower is better)
Translates to: SFPMTPVSSSESGLGQLVCVEVH*CAPGDI
Trigger: GATGTCACCGGGTGCGCATCAATGTACCTCCACACA...TACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCACCGGAGTCATTGGGAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp GAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCCGACCCCTTCCTGCTTaGTGTCTCCTTCAAATTTCT +
Preference number: 4 (lower is better)
Translates to: EQLRVWARATGRTVGICPRPLPA*CLLQIS
Trigger: AGAAATTTGAAGGAGACATCAAGCAGGAAGGGGTCG...GGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp GGGGAGCTCAGTGAACCTCCTCACCCTCCTGCCAGTATGAAGTTGGGAAGCGCCTCTGTGGGTTTCAGATaGAGGTTTCCCCAACACCAG +
Preference number: 4 (lower is better)
Translates to: GELSEPPHPPASMKLGSASVGFR*RFPQHQ
Trigger: CTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGA...GGCGCTTCCCAACTTCATACTGGCAGGAGGGTGAGGAGGTTCACTGAGCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR TCA 90 bp CCCTCATCCCAGGTTCCTTTCTTCAACCTCCGCCTGCCTCTGGGAACACAGAGCCCCCAGGGGAGTTTCTaGGACTCTAGACTTGCCATT +
Preference number: 4 (lower is better)
Translates to: PSSQVPFFNLRLPLGTQSPQGSF*DSRLAI
Trigger: AATGGCAAGTCTAGAGTCTCAGAAACTCCCCTGGGG...GCTCTGTGTTCCCAGAGGCAGGCGGAGGTTGAAGAAAGGAACCTGGGATGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR TCA 90 bp TCCTTCCCAATGACTCCGGTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGACCTAGGAAGAAGCTaGGCTGAATTCCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: SFPMTPVSSSESGLGQLVDLGRS*AEFLQG
Trigger: GCCCTGGAGGAATTCAGCTCAGCTTCTTCCTAGGTC...TACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCACCGGAGTCATTGGGAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR GCA 90 bp TCTGCTTATACCCAGCACCCCTCATCCCAGGTTCCTTTCTTCAACCTCCGCCTGCTCAGGAAATTCCGTTaGTCTGCCCGGGGAAAGGGC +
Preference number: 4 (lower is better)
Translates to: SAYTQHPSSQVPFFNLRLLRKFR*SARGKG
Trigger: GCCCTTTCCCCGGGCAGAGCAACGGAATTTCCTGAG...CAGGCGGAGGTTGAAGAAAGGAACCTGGGATGAGGGGTGCTGGGTATAAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR GCA 90 bp CCCAACACCAGATTCATTTATATGTACACAGGGCAGCACCCACCTGCGGCAGGGCTCAGGAAATTCCGTTaGTCTGCCCGGGGAAAGGGC +
Preference number: 4 (lower is better)
Translates to: PNTRFIYMYTGQHPPAAGLRKFR*SARGKG
Trigger: GCCCTTTCCCCGGGCAGAGCAACGGAATTTCCTGAG...CCCTGCCGCAGGTGGGTGCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR GCA 90 bp GGTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCGCACCGACCCCTTCCTaGTTGATGTCTCCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: GEQLRVWARATGRTVGICAPTPS*LMSPSN
Trigger: ATTTGAAGGAGACATCAAGCAGGAAGGGGTCGGTGC...GCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR GCA 90 bp AGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCAGAGGCACCGACCCCTTCCTaGTTGATGTCTCCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: SSESGLGQLVGQWGSAPEAPTPS*LMSPSN
Trigger: ATTTGAAGGAGACATCAAGCAGGAAGGGGTCGGTGC...CTCTGGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR GCA 90 bp CTTCCCAATGACTCCGGTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACCTCCTCACCCTCCTaGCAGTATGAAGTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: LPNDSGEQLRVWARATGRTSSPS*QYEVGK
Trigger: CTTCCCAACTTCATACTGGCAGGAGGGTGAGGAGGT...CCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCACCGGAGTCATTGGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR GCA 90 bp CTTCAACCTCCGCCTGCCTCTGGGAACACAGAGCACCAAGAACTGACAAACCGGGAACCCATCCCTCTCTaGTTATACCCAGCACCCCTC +
Preference number: 4 (lower is better)
Translates to: LQPPPASGNTEHQELTNREPIPL*LYPAPL
Trigger: GAGGGGTGCTGGGTATAAGCAGAGAGGGATGGGTTC...CCGGTTTGTCAGTTCTTGGTGCTCTGTGTTCCCAGAGGCAGGCGGAGGTTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CCA 90 bp TCTGCTTATACCCAGCACCCCTCATCCCAGGTTCCTTTCTTCAACCTCCGCCTGTCTGTGCGGGGACTCTaGGGCTCCTTCTTGATCCTG +
Preference number: 4 (lower is better)
Translates to: SAYTQHPSSQVPFFNLRLSVRGL*GSFLIL
Trigger: CAGGATCAAGAAGGAGCCCCAGAGTCCCCGCACAGA...CAGGCGGAGGTTGAAGAAAGGAACCTGGGATGAGGGGTGCTGGGTATAAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CCA 90 bp GGTTTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCACCCACCTGCGACCCTGGTCCACGGCTaGCTGGCCCGCCTGTTCATA +
Preference number: 4 (lower is better)
Translates to: GFPNTRFIYMYTGQHPPATLVHG*LARLFI
Trigger: TATGAACAGGCGGGCCAGCCAGCCGTGGACCAGGGT...CGCAGGTGGGTGCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp AGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCAGAGACATCGAGAAGCCCTCTGTGTaGAGGTACATTGATGCGCAC +
Preference number: 4 (lower is better)
Translates to: RVWARATGRTVGICPRDIEKPSV*RYIDAH
Trigger: GTGCGCATCAATGTACCTCCACACAGAGGGCTTCTC...GATGTCTCTGGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp TTTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCACCCACCTGCGGCGGATGCCCCAGAGCCTaGCGACCTCCTCAGGCTCAA +
Preference number: 4 (lower is better)
Translates to: FPQHQIHLYVHRAAPTCGGCPRA*RPPQAQ
Trigger: TTGAGCCTGAGGAGGTCGCCAGGCTCTGGGGCATCC...GCCGCAGGTGGGTGCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp TTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCACCCACCTGCGGCAGGATGCCCCAGAGCCTaGCGACCTCCTCAGGCTCAA +
Preference number: 4 (lower is better)
Translates to: FPNTRFIYMYTGQHPPAAGCPRA*RPPQAQ
Trigger: TTGAGCCTGAGGAGGTCGCCAGGCTCTGGGGCATCC...TGCCGCAGGTGGGTGCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp TCTGCTTATACCCAGCACCCCTCATCCCAGGTTCCTTTCTTCAACCTCCGCCTGGAGCAGCTCAGAGTCTaGGCTAGGGCAACTGGTAGG +
Preference number: 4 (lower is better)
Translates to: SAYTQHPSSQVPFFNLRLEQLRV*ARATGR
Trigger: CCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTC...CAGGCGGAGGTTGAAGAAAGGAACCTGGGATGAGGGGTGCTGGGTATAAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CCA 90 bp ACAGAGCACCAAGAACTGACAAACCGGGACCCTCCAGGGCCACAGCGTGGGGCAAACTCTTGTTCTCTGTaGTTGGGGAAAAGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: TEHQELTNRDPPGPQRGANSCSL*LGKRCG
Trigger: CCCACACCTTTTCCCCAACCACAGAGAACAAGAGTT...TGCCCCACGCTGTGGCCCTGGAGGGTCCCGGTTTGTCAGTTCTTGGTGCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CCA 90 bp GAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCAACTCTTGTTCTCTGTaGTTGGGGAAAAGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: EQLRVWARATGRTVGICPNSCSL*LGKRCG
Trigger: CCCACACCTTTTCCCCAACCACAGAGAACAAGAGTT...GGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CCA 90 bp AGATCTGGGGAGCTCAGTGAACCTCCTCACCCTCCTGCCAGTATGAAGTTGGGAAGGCAAAGGGTCCCTTaGAGCAGGAACCCATCCCTC +
Preference number: 4 (lower is better)
Translates to: RSGELSEPPHPPASMKLGRQRVP*SRNPSL
Trigger: GAGGGATGGGTTCCTGCTCCAAGGGACCCTTTGCCT...TCCCAACTTCATACTGGCAGGAGGGTGAGGAGGTTCACTGAGCTCCCCAGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR TCA 90 bp AGATCTGGGGAGCTCAGTGAACCTCCTCACCCTCCTGCCAGTATGAAGTTGGGACCCCTCCCTGAGATGTaGAGGAGTGGCAAATGTCCA +
Preference number: 4 (lower is better)
Translates to: RSGELSEPPHPPASMKLGPLPEM*RSGKCP
Trigger: TGGACATTTGCCACTCCTTCACATCTCAGGGAGGGG...TCCCAACTTCATACTGGCAGGAGGGTGAGGAGGTTCACTGAGCTCCCCAGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR TCA 90 bp CCTCCTGCCAGTATGAAGTTGGGAAGCGCCTTCTCTGTCCCCCAGAACAGAACATTGAGAGCTGGACGCTaGTTGTCCGGGAAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: PPASMKLGSAFSVPQNRTLRAGR*LSGKAK
Trigger: TTTGGCCTTCCCGGACAATCAGCGTCCAGCTCTCAA...TGTTCTGTTCTGGGGGACAGAGAAGGCGCTTCCCAACTTCATACTGGCAGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR TCA 90 bp TCCTTCCCAATGACTCCGGTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTACCCCAGGGGAGTTTCTaGGACTCTAGACTTGCCATT +
Preference number: 4 (lower is better)
Translates to: SFPMTPVSSSESGLGQLVPQGSF*DSRLAI
Trigger: AATGGCAAGTCTAGAGTCTCAGAAACTCCCCTGGGG...TACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCACCGGAGTCATTGGGAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
CDS-3UTR TCA 90 bp CCCCAGAGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTCCTCCAGGGCCCAGGTaGAACCCCCAGGGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: PQRHLWVSDEGFPNTRFIPPGPR*NPQGSF
Trigger: GAAACTCCCCTGGGGGTTTCACCTGGGCCCTGGAGG...AATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCTCTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CCA 90 bp AGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCAGAGACATCCTGGTGGTGGGGCTGTaGAAAGCTAGGTTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: RVWARATGRTVGICPRDILVVGL*KARFSE
Trigger: TTCAGAAAACCTAGCTTTCCACAGCCCCACCACCAG...GATGTCTCTGGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp CTTCCCAATGACTCCGGTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGCTGGTGGTGGGGCTGTaGAAAGCTAGGTTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: LPNDSGEQLRVWARATGRLVVGL*KARFSE
Trigger: TTCAGAAAACCTAGCTTTCCACAGCCCCACCACCAG...CCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCACCGGAGTCATTGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp TTCCTTTCTTCAACCTCCGCCTGCCTCTGGGAACACAGAGCACCAAGAACTGACTCTGTGCGGGGACTCTaGGGCTCCTTCTTGATCCTG +
Preference number: 4 (lower is better)
Translates to: FLSSTSACLWEHRAPRTDSVRGL*GSFLIL
Trigger: CAGGATCAAGAAGGAGCCCCAGAGTCCCCGCACAGA...GTCAGTTCTTGGTGCTCTGTGTTCCCAGAGGCAGGCGGAGGTTGAAGAAAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CCA 90 bp TTTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCACCCACCTGCGGCATGGTGGTAGGGGAGTaGCGGCTTCCTGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: FPQHQIHLYVHRAAPTCGMVVGE*RLPAAG
Trigger: TCCTGCAGCAGGAAGCCGCCACTCCCCTACCACCAT...GCCGCAGGTGGGTGCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp CCCCAGAGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTCATGGCCCCGTCACCTaGAGAGGGCCCAGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: PQRHLWVSDEGFPNTRFIHGPVT*RGPREA
Trigger: GGCTTCTCTGGGCCCTCTCCAGGTGACGGGGCCATG...AATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCTCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp AGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCAGAGAACGCAGACATCATCTaGGAATGGTCGCAGAGGTTT +
Preference number: 4 (lower is better)
Translates to: SSESGLGQLVGQWGSAPENADII*EWSQRF
Trigger: AAACCTCTGCGACCATTCCCAGATGATGTCTGCGTT...CTCTGGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp AGATCTGGGGAGCTCAGTGAACCTCCTCACCCTCCTGCCAGTATGAAGTTGGGACAACTGGTAGGACAGTaGGGATCTGCCCCAGAGACA +
Preference number: 4 (lower is better)
Translates to: RSGELSEPPHPPASMKLGQLVGQ*GSAPET
Trigger: TGTCTCTGGGGCAGATCCCCACTGTCCTACCAGTTG...TCCCAACTTCATACTGGCAGGAGGGTGAGGAGGTTCACTGAGCTCCCCAGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CCA 90 bp GTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCAGAGACATCTGTGCCTTTATTAAGGTCTaGCAGATGTGGTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: VWARATGRTVGICPRDICAFIKV*QMWWRW
Trigger: CCACCTCCACCACATCTGCCAGACCTTAATAAAGGC...ACAGATGTCTCTGGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
3UTR CAA 72 bp CTCAGTGAACCTCCTCACCCTCCTGCCAGTATGAAGTaGGGAAGCGCCTTCTCTGTCCCCCAGAACAGAACA +
Preference number: 4 (lower is better)
Translates to: LSEPPHPPASMK*GSAFSVPQNRT
Trigger: TGTTCTGTTCTGGGGGACAGAGAAGGCGCTTCCCAACTTCATACTGGCAGGAGGGTGAGGAGGTTCACTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR TCA 90 bp TTTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCACCCACCTGCGGCCGGGCGATTTGCTGCTaGAGGTGTAGGGCACTTGCT +
Preference number: 4 (lower is better)
Translates to: FPQHQIHLYVHRAAPTCGRAICC*RCRALA
Trigger: AGCAAGTGCCCTACACCTTCAGCAGCAAATCGCCCG...GCCGCAGGTGGGTGCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000545089.5
ENST00000591713.5
CDS-3UTR TCA 90 bp TCCTTCCCAATGACTCCGGTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTACACGTCTCCTGGAAGTaGCTTAGATCCTGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: SFPMTPVSSSESGLGQLVHVSWK*LRSWKR
Trigger: TCTCTTCCAGGATCTAAGTCACTTCCAGGAGACGTG...TACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCACCGGAGTCATTGGGAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp TTCCTTTCTTCAACCTCCGCCTGCCTCTGGGAACACAGAGCACCAAGAACTGACTGTGTGGAGGTACATTaGTGCGCACCCGGTGACATC +
Preference number: 4 (lower is better)
Translates to: FLSSTSACLWEHRAPRTDCVEVH*CAPGDI
Trigger: GATGTCACCGGGTGCGCATCAATGTACCTCCACACA...GTCAGTTCTTGGTGCTCTGTGTTCCCAGAGGCAGGCGGAGGTTGAAGAAAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR TCA 90 bp TTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCACCCACCTGCGGCACTGTGTCCTCCTCACTaGCAGGCCGGTCAAACTCAG +
Preference number: 4 (lower is better)
Translates to: FPNTRFIYMYTGQHPPAALCPPH*QAGQTQ
Trigger: CTGAGTTTGACCGGCCTGTCAGTGAGGAGGACACAG...TGCCGCAGGTGGGTGCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp TTTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCACCCACCTGCGGCCAGAGCACCAAGAACTaGCAAACCGGGACCCTCCAG +
Preference number: 4 (lower is better)
Translates to: FPQHQIHLYVHRAAPTCGQSTKN*QTGTLQ
Trigger: CTGGAGGGTCCCGGTTTGTCAGTTCTTGGTGCTCTG...GCCGCAGGTGGGTGCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR GCA 90 bp GGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACACAGGGCGGAGTGGCGGCTTCCTaGTGCAGGACAGGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: GFQMKVSPTPDSFICTQGGVAAS*CRTGPG
Trigger: ACCCGGCCCTGTCCTGCAGCAGGAAGCCGCCACTCC...GCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR GCA 90 bp TCTTCAACCTCCGCCTGCCTCTGGGAACACAGAGCACCAAGAACTGACAAACCGCAAATGTCCAGGGGCTaGTGGAAGACGGAGCTATGT +
Preference number: 4 (lower is better)
Translates to: SSTSACLWEHRAPRTDKPQMSRG*WKTELC
Trigger: ACATAGCTCCGTCTTCCAGCAGCCCCTGGACATTTG...CGGTTTGTCAGTTCTTGGTGCTCTGTGTTCCCAGAGGCAGGCGGAGGTTGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR GCA 90 bp CCCAGAGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTGCCCCTGGGTACCTGTaGCCATTGACCCCACCCTGG +
Preference number: 4 (lower is better)
Translates to: PRDICGFQMKVSPTPDSFAPGYL*PLTPPW
Trigger: CCAGGGTGGGGTCAATGGGCACAGGTACCCAGGGGC...AAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR GCA 90 bp TTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCACCCACCTGCGGCAAGGACAGTGGGGATCTaGCCCAGAGACATCTGTGGG +
Preference number: 4 (lower is better)
Translates to: FPNTRFIYMYTGQHPPAARTVGI*PRDICG
Trigger: CCCACAGATGTCTCTGGGGCAGATCCCCACTGTCCT...TGCCGCAGGTGGGTGCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR GCA 90 bp GGTTTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCACCCACCTGCGCGGGCTCGCCGTTTCTaGTTTCTGCAGCCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: GFPNTRFIYMYTGQHPPARARRF*FLQPCF
Trigger: AAAGCAGGGCTGCAGAAAGCAGAAACGGCGAGCCCG...CGCAGGTGGGTGCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538265.5
CDS-3UTR GCA 90 bp TTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCACCCACCTGCGGCACAAATGTCCAGGGGCTaGTGGAAGACGGAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: FPNTRFIYMYTGQHPPAAQMSRG*WKTELE
Trigger: CTCCAGCTCCGTCTTCCAGCAGCCCCTGGACATTTG...TGCCGCAGGTGGGTGCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545089.5
CDS-3UTR CCA 90 bp CATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACGTCCCGAGCATGCCCTaGAGCCCGCACCGAGGGCCG +
Preference number: 4 (lower is better)
Translates to: HLWVSDEGFPNTRFIYMYVPSMP*SPHRGP
Trigger: CGGCCCTCGGTGCGGGCTCCAGGGCATGCTCGGGAC...GTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319349.10
ENST00000545954.5
CDS-3UTR CCA 90 bp GAAGTGGGGGCCTTTATTAAGGTCTGGCAGATGTGGTGGAGGTGGAAGTACAAAATGGTGGTAGGGGAGTaGCGGCTTCCTGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: EVGAFIKVWQMWWRWKYKMVVGE*RLPAAG
Trigger: TCCTGCAGCAGGAAGCCGCCACTCCCCTACCACCAT...TTTGTACTTCCACCTCCACCACATCTGCCAGACCTTAATAAAGGCCCCCACTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CCA 90 bp TTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCACCCACCTGCGGCAGGGGGTCATAGGCACTaGAGTAAAGGCACTGCTCGC +
Preference number: 4 (lower is better)
Translates to: FPNTRFIYMYTGQHPPAAGGHRH*SKGTAR
Trigger: GCGAGCAGTGCCTTTACTCCAGTGCCTATGACCCCC...TGCCGCAGGTGGGTGCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp TCTGCTTATACCCAGCACCCCTCATCCCAGGTTCCTTTCTTCAACCTCCGCCTGGAGAAGCCCTCTGTGTaGAGGTACATTGATGCGCAC +
Preference number: 4 (lower is better)
Translates to: SAYTQHPSSQVPFFNLRLEKPSV*RYIDAH
Trigger: GTGCGCATCAATGTACCTCCACACAGAGGGCTTCTC...CAGGCGGAGGTTGAAGAAAGGAACCTGGGATGAGGGGTGCTGGGTATAAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CCA 90 bp CCCAGAGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTCATGGCCCCGTCACCTaGAGAGGGCCCAGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: PRDICGFQMKVSPTPDSFHGPVT*RGPREA
Trigger: GGCTTCTCTGGGCCCTCTCCAGGTGACGGGGCCATG...AAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp GTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCAGAGACATCTGTAACGCAGACATCATCTaGGAATGGTCGCAGAGGTTT +
Preference number: 4 (lower is better)
Translates to: VWARATGRTVGICPRDICNADII*EWSQRF
Trigger: AAACCTCTGCGACCATTCCCAGATGATGTCTGCGTT...ACAGATGTCTCTGGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp TTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCACCCACCTGCGGCAAGGCAAAGGGTCCCTTaGAGCAGGAACCCATCCCTC +
Preference number: 4 (lower is better)
Translates to: FPNTRFIYMYTGQHPPAARQRVP*SRNPSL
Trigger: GAGGGATGGGTTCCTGCTCCAAGGGACCCTTTGCCT...TGCCGCAGGTGGGTGCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CCA 90 bp ACCCCTCATCCCAGGTTCCTTTCTTCAACCTCCGCCTGCCTCTGGGAACACAGAGCCTTTATTAAGGTCTaGCAGATGTGGTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: TPHPRFLSSTSACLWEHRAFIKV*QMWWRW
Trigger: CCACCTCCACCACATCTGCCAGACCTTAATAAAGGC...TCTGTGTTCCCAGAGGCAGGCGGAGGTTGAAGAAAGGAACCTGGGATGAGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CCA 90 bp TTTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCACCCACCTGCGGCGCTGGAAGACGGAGCTaGAGTAAAGGCACTGCTCGC +
Preference number: 4 (lower is better)
Translates to: FPQHQIHLYVHRAAPTCGAGRRS*SKGTAR
Trigger: GCGAGCAGTGCCTTTACTCCAGCTCCGTCTTCCAGC...GCCGCAGGTGGGTGCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545089.5
CDS-3UTR TCA 90 bp GGTTTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCACCCACCTGCGCCCCTCCCTGAGATGTaGAGGAGTGGCAAATGTCCA +
Preference number: 4 (lower is better)
Translates to: GFPNTRFIYMYTGQHPPAPLPEM*RSGKCP
Trigger: TGGACATTTGCCACTCCTTCACATCTCAGGGAGGGG...CGCAGGTGGGTGCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp TCCTTCCCAATGACTCCGGTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTACGACCCCTTCCTGCTTaGTGTCTCCTTCAAATTTCT +
Preference number: 4 (lower is better)
Translates to: SFPMTPVSSSESGLGQLVRPLPA*CLLQIS
Trigger: AGAAATTTGAAGGAGACATCAAGCAGGAAGGGGTCG...TACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCACCGGAGTCATTGGGAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp GGTTTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCACCCACCTGCGTTGAGAGCTGGACGCTaGTTGTCCGGGAAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: GFPNTRFIYMYTGQHPPALRAGR*LSGKAK
Trigger: TTTGGCCTTCCCGGACAATCAGCGTCCAGCTCTCAA...CGCAGGTGGGTGCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR GCA 90 bp CCCAACACCAGATTCATTTATATGTACACAGGGCAGCACCCACCTGCGGCAGGGGCACCGACCCCTTCCTaGTTGATGTCTCCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: PNTRFIYMYTGQHPPAAGAPTPS*LMSPSN
Trigger: ATTTGAAGGAGACATCAAGCAGGAAGGGGTCGGTGC...CCCTGCCGCAGGTGGGTGCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR GCA 90 bp TTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCACCCACCTGCGGCAGAACCCATCCCTCTCTaGTTATACCCAGCACCCCTC +
Preference number: 4 (lower is better)
Translates to: FPNTRFIYMYTGQHPPAAEPIPL*LYPAPL
Trigger: GAGGGGTGCTGGGTATAAGCAGAGAGGGATGGGTTC...TGCCGCAGGTGGGTGCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR GCA 90 bp CATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACGGTGGGGGAGGGGGCTaGGTTCGCACACCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: HLWVSDEGFPNTRFIYMYGGGGG*VRTPSR
Trigger: CCTGGACGGTGTGCGAACGCAGCCCCCTCCCCCACC...GTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000545089.5
CDS-3UTR CCA 90 bp CCCAACACCAGATTCATTTATATGTACACAGGGCAGCACCCACCTGCGGCAGGGCTGGTGGTGGGGCTGTaGAAAGCTAGGTTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: PNTRFIYMYTGQHPPAAGLVVGL*KARFSE
Trigger: TTCAGAAAACCTAGCTTTCCACAGCCCCACCACCAG...CCCTGCCGCAGGTGGGTGCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp TTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCACCCACCTGCGGCAATGTCCAGGGGCTGCTaGAAGACGGAGCTATGTTCC +
Preference number: 4 (lower is better)
Translates to: FPNTRFIYMYTGQHPPAAMSRGC*KTELCS
Trigger: GGAACATAGCTCCGTCTTCCAGCAGCCCCTGGACAT...TGCCGCAGGTGGGTGCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp AGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGGTGTTGGTAGGGGGCTaGGAGGGGTTCCCGGCCCCC +
Preference number: 4 (lower is better)
Translates to: RHLWVSDEGFPNTRFIYMVLVGG*EGFPAP
Trigger: GGGGGCCGGGAACCCCTCCCAGCCCCCTACCAACAC...CATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp AGAGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATAGTGTTGGTAGGGGGCTaGGAGGGGTTCCCGGCCCCC +
Preference number: 4 (lower is better)
Translates to: RDICGFQMKVSPTPDSFIVLVGG*EGFPAP
Trigger: GGGGGCCGGGAACCCCTCCCAGCCCCCTACCAACAC...TATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp CCCAGAGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTTGGTCCACGGCTGGCTaGCCCGCCTGTTCATACAGG +
Preference number: 4 (lower is better)
Translates to: PRDICGFQMKVSPTPDSFWSTAG*PACSYR
Trigger: CCTGTATGAACAGGCGGGCCAGCCAGCCGTGGACCA...AAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp CCCAGAGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTACCCTGGTCCACGGCTaGCTGGCCCGCCTGTTCATA +
Preference number: 4 (lower is better)
Translates to: PRDICGFQMKVSPTPDSFTLVHG*LARLFI
Trigger: TATGAACAGGCGGGCCAGCCAGCCGTGGACCAGGGT...AAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp CCCCAGAGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTCATAGCCATAGCCCATaGCCCCGTCACCTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: PQRHLWVSDEGFPNTRFIHSHSP*PRHLER
Trigger: CCTCTCCAGGTGACGGGGCCATGGGCTATGGCTATG...AATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCTCTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp TCTTCAACCTCCGCCTGCCTCTGGGAACACAGAGCACCAAGAACTGACAAACCGGCCTTTATTAAGGTCTaGCAGATGTGGTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SSTSACLWEHRAPRTDKPAFIKV*QMWWRW
Trigger: CCACCTCCACCACATCTGCCAGACCTTAATAAAGGC...CGGTTTGTCAGTTCTTGGTGCTCTGTGTTCCCAGAGGCAGGCGGAGGTTGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR TCA 90 bp CCCCAGAGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTTGATGCGCACCCGGTaGCATCTGAGTCGTAGGCGA +
Preference number: 4 (lower is better)
Translates to: PQRHLWVSDEGFPNTRFILMRTR*HLSRRR
Trigger: TCGCCTACGACTCAGATGTCACCGGGTGCGCATCAA...AATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCTCTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp TTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCACCCACCTGCGGCAGGTCAAACTCAGCCTTaGGAGCTGGACGCTGATTGT +
Preference number: 4 (lower is better)
Translates to: FPNTRFIYMYTGQHPPAAGQTQP*ELDADC
Trigger: ACAATCAGCGTCCAGCTCTCAAGGCTGAGTTTGACC...TGCCGCAGGTGGGTGCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp TTTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCACCCACCTGCGGCGGTCAAACTCAGCCTTaGGAGCTGGACGCTGATTGT +
Preference number: 4 (lower is better)
Translates to: FPQHQIHLYVHRAAPTCGGQTQP*ELDADC
Trigger: ACAATCAGCGTCCAGCTCTCAAGGCTGAGTTTGACC...GCCGCAGGTGGGTGCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp CCCCAGAGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTCTGTGTCCTCCTCACTaGCAGGCCGGTCAAACTCAG +
Preference number: 4 (lower is better)
Translates to: PQRHLWVSDEGFPNTRFILCPPH*QAGQTQ
Trigger: CTGAGTTTGACCGGCCTGTCAGTGAGGAGGACACAG...AATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCTCTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp TTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCACCCACCTGCGGCACCCCAGGGGAGTTTCTaGGACTCTAGACTTGCCATT +
Preference number: 4 (lower is better)
Translates to: FPNTRFIYMYTGQHPPAAPQGSF*DSRLAI
Trigger: AATGGCAAGTCTAGAGTCTCAGAAACTCCCCTGGGG...TGCCGCAGGTGGGTGCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
CDS-3UTR GCA 90 bp CATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACGTGGCGGCTTCCTGCTaGAGGACAGGGCCGGGTCTG +
Preference number: 4 (lower is better)
Translates to: HLWVSDEGFPNTRFIYMYVAASC*RTGPGL
Trigger: CAGACCCGGCCCTGTCCTGCAGCAGGAAGCCGCCAC...GTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR GCA 90 bp CATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACGGAGTGGCGGCTTCCTaGTGCAGGACAGGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: HLWVSDEGFPNTRFIYMYGVAAS*CRTGPG
Trigger: ACCCGGCCCTGTCCTGCAGCAGGAAGCCGCCACTCC...GTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR GCA 90 bp GGTTTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCACCCACCTGCGCAAATGTCCAGGGGCTaGTGGAAGACGGAGCTATGT +
Preference number: 4 (lower is better)
Translates to: GFPNTRFIYMYTGQHPPAQMSRG*WKTELC
Trigger: ACATAGCTCCGTCTTCCAGCAGCCCCTGGACATTTG...CGCAGGTGGGTGCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR GCA 90 bp TTCCTTTCTTCAACCTCCGCCTGCCTCTGGGAACACAGAGCACCAAGAACTGACGCACCGACCCCTTCCTaGTTGATGTCTCCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: FLSSTSACLWEHRAPRTDAPTPS*LMSPSN
Trigger: ATTTGAAGGAGACATCAAGCAGGAAGGGGTCGGTGC...GTCAGTTCTTGGTGCTCTGTGTTCCCAGAGGCAGGCGGAGGTTGAAGAAAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR GCA 90 bp CCCAGAGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTCGGCCCCTCTCGAAATaGACCGACCCCTTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: PRDICGFQMKVSPTPDSFRPLSK*TDPFLL
Trigger: AAGCAGGAAGGGGTCGGTGCATTTCGAGAGGGGCCG...AAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCTCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR GCA 90 bp CCCCAGAGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTAAGGCCACCAGAAATTaGCACAGCTGCAGGGCACCC +
Preference number: 4 (lower is better)
Translates to: PQRHLWVSDEGFPNTRFIKATRN*HSCRAP
Trigger: GGGTGCCCTGCAGCTGTGGCAATTTCTGGTGGCCTT...AATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCTCTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR GCA 90 bp TTTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCACCCACCTGCGGCACCTCCTCACCCTCCTaGCAGTATGAAGTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: FPQHQIHLYVHRAAPTCGTSSPS*QYEVGK
Trigger: CTTCCCAACTTCATACTGGCAGGAGGGTGAGGAGGT...GCCGCAGGTGGGTGCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CCA 90 bp CCCCAGAGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTGGGGGTCATAGGCACTaGAGTAAAGGCACTGCTCGC +
Preference number: 4 (lower is better)
Translates to: PQRHLWVSDEGFPNTRFIGGHRH*SKGTAR
Trigger: GCGAGCAGTGCCTTTACTCCAGTGCCTATGACCCCC...AATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCTCTGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp ATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACAGTGTTGGTAGGGGGCTaGGAGGGGTTCCCGGCCCCC +
Preference number: 4 (lower is better)
Translates to: ICGFQMKVSPTPDSFICTVLVGG*EGFPAP
Trigger: GGGGGCCGGGAACCCCTCCCAGCCCCCTACCAACAC...TGTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp CCAGGTTCCTTTCTTCAACCTCCGCCTGCCTCTGGGAACACAGAGCACCAAGAAAACGCAGACATCATCTaGGAATGGTCGCAGAGGTTT +
Preference number: 4 (lower is better)
Translates to: PGSFLQPPPASGNTEHQENADII*EWSQRF
Trigger: AAACCTCTGCGACCATTCCCAGATGATGTCTGCGTT...TTCTTGGTGCTCTGTGTTCCCAGAGGCAGGCGGAGGTTGAAGAAAGGAACCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CCA 90 bp AGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGACCCTTGGGGCCAAATaGCTGGGCGGGGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: RHLWVSDEGFPNTRFIYMTLGAK*LGGASQ
Trigger: CTGGCTGGCCCCGCCCAGCCATTTGGCCCCAAGGGT...CATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp CATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACACCCTTGGGGCCAAATaGCTGGGCGGGGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: HLWVSDEGFPNTRFIYMYTLGAK*LGGASQ
Trigger: CTGGCTGGCCCCGCCCAGCCATTTGGCCCCAAGGGT...GTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp CTTTCTTCAACCTCCGCCTGCCTCTGGGAACACAGAGCACCAAGAACTGACAAACAGATGTGGTGGAGGTaGAAGTACAAACCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: LSSTSACLWEHRAPRTDKQMWWR*KYKPRP
Trigger: AGGCCTGGGTTTGTACTTCCACCTCCACCACATCTG...TTTGTCAGTTCTTGGTGCTCTGTGTTCCCAGAGGCAGGCGGAGGTTGAAGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR TCA 90 bp CCCCAGAGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTCCCCTCCCTGAGATGTaGAGGAGTGGCAAATGTCCA +
Preference number: 4 (lower is better)
Translates to: PQRHLWVSDEGFPNTRFIPLPEM*RSGKCP
Trigger: TGGACATTTGCCACTCCTTCACATCTCAGGGAGGGG...AATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCTCTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp GAAGTGGGGGCCTTTATTAAGGTCTGGCAGATGTGGTGGAGGTGGAAGTACAAAGGTCAAACTCAGCCTTaGGAGCTGGACGCTGATTGT +
Preference number: 4 (lower is better)
Translates to: EVGAFIKVWQMWWRWKYKGQTQP*ELDADC
Trigger: ACAATCAGCGTCCAGCTCTCAAGGCTGAGTTTGACC...TTTGTACTTCCACCTCCACCACATCTGCCAGACCTTAATAAAGGCCCCCACTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR TCA 90 bp TTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCACCCACCTGCGGCATCTGTGGGTTTCAGATaGAGGTTTCCCCAACACCAG +
Preference number: 4 (lower is better)
Translates to: FPNTRFIYMYTGQHPPAASVGFR*RFPQHQ
Trigger: CTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGA...TGCCGCAGGTGGGTGCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp TTTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCACCCACCTGCGGCTCTGTGGGTTTCAGATaGAGGTTTCCCCAACACCAG +
Preference number: 4 (lower is better)
Translates to: FPQHQIHLYVHRAAPTCGSVGFR*RFPQHQ
Trigger: CTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGA...GCCGCAGGTGGGTGCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp CCCAGAGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTCAGAGCACCAAGAACTaGCAAACCGGGACCCTCCAG +
Preference number: 4 (lower is better)
Translates to: PRDICGFQMKVSPTPDSFQSTKN*QTGTLQ
Trigger: CTGGAGGGTCCCGGTTTGTCAGTTCTTGGTGCTCTG...AAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR GCA 90 bp CTTCAACCTCCGCCTGCCTCTGGGAACACAGAGCACCAAGAACTGACAAACCGGAAATCAGGAACAAACTaGTCATCACTGTCTGGTACC +
Preference number: 4 (lower is better)
Translates to: LQPPPASGNTEHQELTNRKSGTN*SSLSGT
Trigger: GGTACCAGACAGTGATGAGCAGTTTGTTCCTGATTT...CCGGTTTGTCAGTTCTTGGTGCTCTGTGTTCCCAGAGGCAGGCGGAGGTTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR GCA 90 bp ACCCCTCATCCCAGGTTCCTTTCTTCAACCTCCGCCTGCCTCTGGGAACACAGAAAATCAGGAACAAACTaGTCATCACTGTCTGGTACC +
Preference number: 4 (lower is better)
Translates to: TPHPRFLSSTSACLWEHRKSGTN*SSLSGT
Trigger: GGTACCAGACAGTGATGAGCAGTTTGTTCCTGATTT...TCTGTGTTCCCAGAGGCAGGCGGAGGTTGAAGAAAGGAACCTGGGATGAGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR GCA 90 bp ATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACAGTGGCGGCTTCCTGCTaGAGGACAGGGCCGGGTCTG +
Preference number: 4 (lower is better)
Translates to: ICGFQMKVSPTPDSFICTVAASC*RTGPGL
Trigger: CAGACCCGGCCCTGTCCTGCAGCAGGAAGCCGCCAC...TGTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR GCA 90 bp AGATCTGGGGAGCTCAGTGAACCTCCTCACCCTCCTGCCAGTATGAAGTTGGGAGGATCATGGTATTCTTaGTTAAAGCTCTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: RSGELSEPPHPPASMKLGGSWYS*LKLCWG
Trigger: TCCCCAGCAGAGCTTTAAGCAAGAATACCATGATCC...TCCCAACTTCATACTGGCAGGAGGGTGAGGAGGTTCACTGAGCTCCCCAGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR GCA 90 bp CCCAACACCAGATTCATTTATATGTACACAGGGCAGCACCCACCTGCGGCAGGGGGATCATGGTATTCTTaGTTAAAGCTCTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: PNTRFIYMYTGQHPPAAGGSWYS*LKLCWG
Trigger: TCCCCAGCAGAGCTTTAAGCAAGAATACCATGATCC...CCCTGCCGCAGGTGGGTGCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR GCA 90 bp CATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACGCCCCTGGGTACCTGTaGCCATTGACCCCACCCTGG +
Preference number: 4 (lower is better)
Translates to: HLWVSDEGFPNTRFIYMYAPGYL*PLTPPW
Trigger: CCAGGGTGGGGTCAATGGGCACAGGTACCCAGGGGC...GTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp GTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCAGAGACATCTGTGCTAGGTTTTCTGAATaGAAATCAGGAACAAACTGC +
Preference number: 4 (lower is better)
Translates to: VWARATGRTVGICPRDICARFSE*KSGTNC
Trigger: GCAGTTTGTTCCTGATTTCCATTCAGAAAACCTAGC...ACAGATGTCTCTGGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp TTTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCACCCACCTGCGGCCTGGTGGTGGGGCTGTaGAAAGCTAGGTTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: FPQHQIHLYVHRAAPTCGLVVGL*KARFSE
Trigger: TTCAGAAAACCTAGCTTTCCACAGCCCCACCACCAG...GCCGCAGGTGGGTGCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp TTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCACCCACCTGCGGCACTGGTGGTGGGGCTGTaGAAAGCTAGGTTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: FPNTRFIYMYTGQHPPAALVVGL*KARFSE
Trigger: TTCAGAAAACCTAGCTTTCCACAGCCCCACCACCAG...TGCCGCAGGTGGGTGCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp CCCAGAGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTGGGGGTCATAGGCACTaGAGTAAAGGCACTGCTCGC +
Preference number: 4 (lower is better)
Translates to: PRDICGFQMKVSPTPDSFGGHRH*SKGTAR
Trigger: GCGAGCAGTGCCTTTACTCCAGTGCCTATGACCCCC...AAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCTCTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp AGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGCTGCTGGGGATAGGGTaGGCAGGGCTCCGACAGCTG +
Preference number: 4 (lower is better)
Translates to: RHLWVSDEGFPNTRFIYMLLGIG*AGLRQL
Trigger: CAGCTGTCGGAGCCCTGCCCACCCTATCCCCAGCAG...CATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp CTCCAGGGCCCAGGTGAAACCCCCAGGGGAGTTTCTGAGACTCTAGACTTGCCATCATACAGGGGATCATaGTATTCTTGCTTAAAGCTC +
Preference number: 4 (lower is better)
Translates to: LQGPGETPRGVSETLDLPSYRGS*YSCLKL
Trigger: GAGCTTTAAGCAAGAATACCATGATCCCCTGTATGA...TGGCAAGTCTAGAGTCTCAGAAACTCCCCTGGGGGTTTCACCTGGGCCCTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CCA 90 bp CTTCCCAATGACTCCGGTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGTCATACAGGGGATCATaGTATTCTTGCTTAAAGCTC +
Preference number: 4 (lower is better)
Translates to: LPNDSGEQLRVWARATGRSYRGS*YSCLKL
Trigger: GAGCTTTAAGCAAGAATACCATGATCCCCTGTATGA...CCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCACCGGAGTCATTGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp CAGAGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATACCCTGGTCCACGGCTaGCTGGCCCGCCTGTTCATA +
Preference number: 4 (lower is better)
Translates to: QRHLWVSDEGFPNTRFIYTLVHG*LARLFI
Trigger: TATGAACAGGCGGGCCAGCCAGCCGTGGACCAGGGT...ATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp TTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCGGATGCCCCAGAGCCTaGCGACCTCCTCAGGCTCAA +
Preference number: 4 (lower is better)
Translates to: FQMKVSPTPDSFICTQGSGCPRA*RPPQAQ
Trigger: TTGAGCCTGAGGAGGTCGCCAGGCTCTGGGGCATCC...GCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp GGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGGGGGAACAGCCGCTaGGGGCTAGTAAGAGTAGCC +
Preference number: 4 (lower is better)
Translates to: GFQMKVSPTPDSFICTQGRGNSR*GLVRVA
Trigger: GGCTACTCTTACTAGCCCCCAGCGGCTGTTCCCCCT...GCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp GAAGTGGGGGCCTTTATTAAGGTCTGGCAGATGTGGTGGAGGTGGAAGTACAAACACGTCTCCTGGAAGTaGCTTAGATCCTGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: EVGAFIKVWQMWWRWKYKHVSWK*LRSWKR
Trigger: TCTCTTCCAGGATCTAAGTCACTTCCAGGAGACGTG...TTTGTACTTCCACCTCCACCACATCTGCCAGACCTTAATAAAGGCCCCCACTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR TCA 90 bp ATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACAGGTACCTGTGCCCATTaGCCCCACCCTGGTCCACGG +
Preference number: 4 (lower is better)
Translates to: ICGFQMKVSPTPDSFICTGTCAH*PHPGPR
Trigger: CCGTGGACCAGGGTGGGGTCAATGGGCACAGGTACC...TGTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp AGAGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATACCGTCTGTTCCTGTTTaGTCACCACCCCCGCCCCTG +
Preference number: 4 (lower is better)
Translates to: RDICGFQMKVSPTPDSFIPSVPV*SPPPPL
Trigger: CAGGGGCGGGGGTGGTGATCAAACAGGAACAGACGG...TATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp GGTTTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCACCCACCTGCGCGACCCCTTCCTGCTTaGTGTCTCCTTCAAATTTCT +
Preference number: 4 (lower is better)
Translates to: GFPNTRFIYMYTGQHPPARPLPA*CLLQIS
Trigger: AGAAATTTGAAGGAGACATCAAGCAGGAAGGGGTCG...CGCAGGTGGGTGCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp ATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACACTGCTGGGGATAGGGTaGGCAGGGCTCCGACAGCTG +
Preference number: 4 (lower is better)
Translates to: ICGFQMKVSPTPDSFICTLLGIG*AGLRQL
Trigger: CAGCTGTCGGAGCCCTGCCCACCCTATCCCCAGCAG...TGTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp TCCTTCCCAATGACTCCGGTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTATCATACAGGGGATCATaGTATTCTTGCTTAAAGCTC +
Preference number: 4 (lower is better)
Translates to: SFPMTPVSSSESGLGQLVSYRGS*YSCLKL
Trigger: GAGCTTTAAGCAAGAATACCATGATCCCCTGTATGA...TACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCACCGGAGTCATTGGGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp AGAGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGGTCCACGGCTGGCTaGCCCGCCTGTTCATACAGG +
Preference number: 4 (lower is better)
Translates to: RDICGFQMKVSPTPDSFIWSTAG*PACSYR
Trigger: CCTGTATGAACAGGCGGGCCAGCCAGCCGTGGACCA...TATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp AGAGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATAACCCTGGTCCACGGCTaGCTGGCCCGCCTGTTCATA +
Preference number: 4 (lower is better)
Translates to: RDICGFQMKVSPTPDSFITLVHG*LARLFI
Trigger: TATGAACAGGCGGGCCAGCCAGCCGTGGACCAGGGT...TATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp CAGAGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATCATAGCCATAGCCCATaGCCCCGTCACCTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: QRHLWVSDEGFPNTRFIYHSHSP*PRHLER
Trigger: CCTCTCCAGGTGACGGGGCCATGGGCTATGGCTATG...ATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp TTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCCATAGCCATAGCCCATaGCCCCGTCACCTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: FQMKVSPTPDSFICTQGSHSHSP*PRHLER
Trigger: CCTCTCCAGGTGACGGGGCCATGGGCTATGGCTATG...GCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp CCCAGAGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTCAACTGGTAGGACAGTaGGGATCTGCCCCAGAGACA +
Preference number: 4 (lower is better)
Translates to: PRDICGFQMKVSPTPDSFQLVGQ*GSAPET
Trigger: TGTCTCTGGGGCAGATCCCCACTGTCCTACCAGTTG...AAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCTCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp ATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACACCGTCTGTTCCTGTTTaGTCACCACCCCCGCCCCTG +
Preference number: 4 (lower is better)
Translates to: ICGFQMKVSPTPDSFICTPSVPV*SPPPPL
Trigger: CAGGGGCGGGGGTGGTGATCAAACAGGAACAGACGG...TGTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp CAGAGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATTTGATGCGCACCCGGTaGCATCTGAGTCGTAGGCGA +
Preference number: 4 (lower is better)
Translates to: QRHLWVSDEGFPNTRFIYLMRTR*HLSRRR
Trigger: TCGCCTACGACTCAGATGTCACCGGGTGCGCATCAA...ATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp GGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACACAGGGCTTGAGAGCTGGACGCTaGTTGTCCGGGAAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: GFQMKVSPTPDSFICTQGLRAGR*LSGKAK
Trigger: TTTGGCCTTCCCGGACAATCAGCGTCCAGCTCTCAA...GCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp CCCAGAGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTGGTCAAACTCAGCCTTaGGAGCTGGACGCTGATTGT +
Preference number: 4 (lower is better)
Translates to: PRDICGFQMKVSPTPDSFGQTQP*ELDADC
Trigger: ACAATCAGCGTCCAGCTCTCAAGGCTGAGTTTGACC...AAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCTCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp GGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACACAGGGCGACCTAGGAAGAAGCTaGGCTGAATTCCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: GFQMKVSPTPDSFICTQGDLGRS*AEFLQG
Trigger: GCCCTGGAGGAATTCAGCTCAGCTTCTTCCTAGGTC...GCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR GCA 90 bp CTTTCTTCAACCTCCGCCTGCCTCTGGGAACACAGAGCACCAAGAACTGACAAAGGATCATGGTATTCTTaGTTAAAGCTCTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: LSSTSACLWEHRAPRTDKGSWYS*LKLCWG
Trigger: TCCCCAGCAGAGCTTTAAGCAAGAATACCATGATCC...TTTGTCAGTTCTTGGTGCTCTGTGTTCCCAGAGGCAGGCGGAGGTTGAAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR GCA 90 bp TTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCAAGGCCACCAGAAATTaGCACAGCTGCAGGGCACCC +
Preference number: 4 (lower is better)
Translates to: FQMKVSPTPDSFICTQGSKATRN*HSCRAP
Trigger: GGGTGCCCTGCAGCTGTGGCAATTTCTGGTGGCCTT...GCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR GCA 90 bp TTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCAGGACAGTGGGGATCTaGCCCAGAGACATCTGTGGG +
Preference number: 4 (lower is better)
Translates to: FQMKVSPTPDSFICTQGSRTVGI*PRDICG
Trigger: CCCACAGATGTCTCTGGGGCAGATCCCCACTGTCCT...GCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp CCCAACACCAGATTCATTTATATGTACACAGGGCAGCACCCACCTGCGGCAGGGGCTAGGTTTTCTGAATaGAAATCAGGAACAAACTGC +
Preference number: 4 (lower is better)
Translates to: PNTRFIYMYTGQHPPAAGARFSE*KSGTNC
Trigger: GCAGTTTGTTCCTGATTTCCATTCAGAAAACCTAGC...CCCTGCCGCAGGTGGGTGCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp CAGAGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATTCTGTGCGGGGACTCTaGGGCTCCTTCTTGATCCTG +
Preference number: 4 (lower is better)
Translates to: QRHLWVSDEGFPNTRFIYSVRGL*GSFLIL
Trigger: CAGGATCAAGAAGGAGCCCCAGAGTCCCCGCACAGA...ATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp AGATCTGGGGAGCTCAGTGAACCTCCTCACCCTCCTGCCAGTATGAAGTTGGGATCATACAGGGGATCATaGTATTCTTGCTTAAAGCTC +
Preference number: 4 (lower is better)
Translates to: RSGELSEPPHPPASMKLGSYRGS*YSCLKL
Trigger: GAGCTTTAAGCAAGAATACCATGATCCCCTGTATGA...TCCCAACTTCATACTGGCAGGAGGGTGAGGAGGTTCACTGAGCTCCCCAGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CCA 90 bp TGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACACAGCATAGCCATAGCCCATaGCCCCGTCACCTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: CGFQMKVSPTPDSFICTQHSHSP*PRHLER
Trigger: CCTCTCCAGGTGACGGGGCCATGGGCTATGGCTATG...CTGTGTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp AGAGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATACATAGCCATAGCCCATaGCCCCGTCACCTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: RDICGFQMKVSPTPDSFIHSHSP*PRHLER
Trigger: CCTCTCCAGGTGACGGGGCCATGGGCTATGGCTATG...TATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp AGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGAAGAGTAGCCACCCTTaGGGCCAAATGGCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: RHLWVSDEGFPNTRFIYMKSSHP*GQMAGR
Trigger: CCGCCCAGCCATTTGGCCCCAAGGGTGGCTACTCTT...CATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp AGAGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATAAGGGGGAACAGCCGCTaGGGGCTAGTAAGAGTAGCC +
Preference number: 4 (lower is better)
Translates to: RDICGFQMKVSPTPDSFIRGNSR*GLVRVA
Trigger: GGCTACTCTTACTAGCCCCCAGCGGCTGTTCCCCCT...TATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp TGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACACAGAGGGGGAACAGCCGCTaGGGGCTAGTAAGAGTAGCC +
Preference number: 4 (lower is better)
Translates to: CGFQMKVSPTPDSFICTQRGNSR*GLVRVA
Trigger: GGCTACTCTTACTAGCCCCCAGCGGCTGTTCCCCCT...CTGTGTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp AGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGAGGGGGAACAGCCGCTaGGGGCTAGTAAGAGTAGCC +
Preference number: 4 (lower is better)
Translates to: RHLWVSDEGFPNTRFIYMRGNSR*GLVRVA
Trigger: GGCTACTCTTACTAGCCCCCAGCGGCTGTTCCCCCT...CATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp AGAGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATCACTGTCTGGTACCTaGGCTTCAGCGAGCCACGTC +
Preference number: 4 (lower is better)
Translates to: RDICGFQMKVSPTPDSFISLSGT*ASASHV
Trigger: GACGTGGCTCGCTGAAGCTCAGGTACCAGACAGTGA...TATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp TTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCTGTGTGGAGGTACATTaGTGCGCACCCGGTGACATC +
Preference number: 4 (lower is better)
Translates to: FQMKVSPTPDSFICTQGSCVEVH*CAPGDI
Trigger: GATGTCACCGGGTGCGCATCAATGTACCTCCACACA...GCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp CCCCAGAGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTCGACCCCTTCCTGCTTaGTGTCTCCTTCAAATTTCT +
Preference number: 4 (lower is better)
Translates to: PQRHLWVSDEGFPNTRFIRPLPA*CLLQIS
Trigger: AGAAATTTGAAGGAGACATCAAGCAGGAAGGGGTCG...AATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCTCTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp TTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCTTGAGAGCTGGACGCTaGTTGTCCGGGAAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: FQMKVSPTPDSFICTQGSLRAGR*LSGKAK
Trigger: TTTGGCCTTCCCGGACAATCAGCGTCCAGCTCTCAA...GCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp TTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCACCCTCCTGCCAGTATaGAGTTGGGAAGCGCCTTCT +
Preference number: 4 (lower is better)
Translates to: FQMKVSPTPDSFICTQGSTLLPV*SWEAPS
Trigger: AGAAGGCGCTTCCCAACTTCATACTGGCAGGAGGGT...GCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR GCA 90 bp AGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGCTCAGGAAATTCCGTTaGTCTGCCCGGGGAAAGGGC +
Preference number: 4 (lower is better)
Translates to: RHLWVSDEGFPNTRFIYMLRKFR*SARGKG
Trigger: GCCCTTTCCCCGGGCAGAGCAACGGAATTTCCTGAG...CATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR GCA 90 bp AGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGAAGGCCACCAGAAATTaGCACAGCTGCAGGGCACCC +
Preference number: 4 (lower is better)
Translates to: RHLWVSDEGFPNTRFIYMKATRN*HSCRAP
Trigger: GGGTGCCCTGCAGCTGTGGCAATTTCTGGTGGCCTT...CATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR GCA 90 bp TTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCTGCTTTCTGCAGCCCTaGTTTACCCGGGCTCGGTTA +
Preference number: 4 (lower is better)
Translates to: FQMKVSPTPDSFICTQGSCFLQP*FTRARL
Trigger: TAACCGAGCCCGGGTAAAGCAGGGCTGCAGAAAGCA...GCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538265.5
CDS-3UTR CCA 90 bp CATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACTCTGTGCGGGGACTCTaGGGCTCCTTCTTGATCCTG +
Preference number: 4 (lower is better)
Translates to: HLWVSDEGFPNTRFIYMYSVRGL*GSFLIL
Trigger: CAGGATCAAGAAGGAGCCCCAGAGTCCCCGCACAGA...GTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp AGAGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATAGAGCAGCTCAGAGTCTaGGCTAGGGCAACTGGTAGG +
Preference number: 4 (lower is better)
Translates to: RDICGFQMKVSPTPDSFIEQLRV*ARATGR
Trigger: CCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTC...TATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp CATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACTGTGTGGAGGTACATTaGTGCGCACCCGGTGACATC +
Preference number: 4 (lower is better)
Translates to: HLWVSDEGFPNTRFIYMYCVEVH*CAPGDI
Trigger: GATGTCACCGGGTGCGCATCAATGTACCTCCACACA...GTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp CATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACACCCTCCTGCCAGTATaGAGTTGGGAAGCGCCTTCT +
Preference number: 4 (lower is better)
Translates to: HLWVSDEGFPNTRFIYMYTLLPV*SWEAPS
Trigger: AGAAGGCGCTTCCCAACTTCATACTGGCAGGAGGGT...GTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR GCA 90 bp CCCCAGAGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTGGATCATGGTATTCTTaGTTAAAGCTCTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: PQRHLWVSDEGFPNTRFIGSWYS*LKLCWG
Trigger: TCCCCAGCAGAGCTTTAAGCAAGAATACCATGATCC...AATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCTCTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR GCA 90 bp AGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGGAACCCATCCCTCTCTaGTTATACCCAGCACCCCTC +
Preference number: 4 (lower is better)
Translates to: RHLWVSDEGFPNTRFIYMEPIPL*LYPAPL
Trigger: GAGGGGTGCTGGGTATAAGCAGAGAGGGATGGGTTC...CATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CCA 90 bp ATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACATCTGTGCGGGGACTCTaGGGCTCCTTCTTGATCCTG +
Preference number: 4 (lower is better)
Translates to: ICGFQMKVSPTPDSFICTSVRGL*GSFLIL
Trigger: CAGGATCAAGAAGGAGCCCCAGAGTCCCCGCACAGA...TGTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp CCCAGAGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTAACGCAGACATCATCTaGGAATGGTCGCAGAGGTTT +
Preference number: 4 (lower is better)
Translates to: PRDICGFQMKVSPTPDSFNADII*EWSQRF
Trigger: AAACCTCTGCGACCATTCCCAGATGATGTCTGCGTT...AAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCTCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp CATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACCTCAGCCTTGAGAGCTaGACGCTGATTGTCCGGGAA +
Preference number: 4 (lower is better)
Translates to: HLWVSDEGFPNTRFIYMYLSLES*TLIVRE
Trigger: TTCCCGGACAATCAGCGTCCAGCTCTCAAGGCTGAG...GTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp CATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACCAACTGGTAGGACAGTaGGGATCTGCCCCAGAGACA +
Preference number: 4 (lower is better)
Translates to: HLWVSDEGFPNTRFIYMYQLVGQ*GSAPET
Trigger: TGTCTCTGGGGCAGATCCCCACTGTCCTACCAGTTG...GTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp ATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACAGAGCAGCTCAGAGTCTaGGCTAGGGCAACTGGTAGG +
Preference number: 4 (lower is better)
Translates to: ICGFQMKVSPTPDSFICTEQLRV*ARATGR
Trigger: CCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTC...TGTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp TTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCCACGTCTCCTGGAAGTaGCTTAGATCCTGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: FQMKVSPTPDSFICTQGSHVSWK*LRSWKR
Trigger: TCTCTTCCAGGATCTAAGTCACTTCCAGGAGACGTG...GCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp ATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACACCCCTCCCTGAGATGTaGAGGAGTGGCAAATGTCCA +
Preference number: 4 (lower is better)
Translates to: ICGFQMKVSPTPDSFICTPLPEM*RSGKCP
Trigger: TGGACATTTGCCACTCCTTCACATCTCAGGGAGGGG...TGTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp ATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACATTGAGAGCTGGACGCTaGTTGTCCGGGAAGGCCAAA +
Preference number: 4 (lower is better)
Translates to: ICGFQMKVSPTPDSFICTLRAGR*LSGKAK
Trigger: TTTGGCCTTCCCGGACAATCAGCGTCCAGCTCTCAA...TGTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp ATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACAACCCTCCTGCCAGTATaGAGTTGGGAAGCGCCTTCT +
Preference number: 4 (lower is better)
Translates to: ICGFQMKVSPTPDSFICTTLLPV*SWEAPS
Trigger: AGAAGGCGCTTCCCAACTTCATACTGGCAGGAGGGT...TGTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CCA 90 bp ATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACAATGTCCAGGGGCTGCTaGAAGACGGAGCTATGTTCC +
Preference number: 4 (lower is better)
Translates to: ICGFQMKVSPTPDSFICTMSRGC*KTELCS
Trigger: GGAACATAGCTCCGTCTTCCAGCAGCCCCTGGACAT...TGTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp ATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACACTCAGCCTTGAGAGCTaGACGCTGATTGTCCGGGAA +
Preference number: 4 (lower is better)
Translates to: ICGFQMKVSPTPDSFICTLSLES*TLIVRE
Trigger: TTCCCGGACAATCAGCGTCCAGCTCTCAAGGCTGAG...TGTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR TCA 90 bp AGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGCACGTCTCCTGGAAGTaGCTTAGATCCTGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: RHLWVSDEGFPNTRFIYMHVSWK*LRSWKR
Trigger: TCTCTTCCAGGATCTAAGTCACTTCCAGGAGACGTG...CATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR GCA 90 bp CCCAGAGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTAAATCAGGAACAAACTaGTCATCACTGTCTGGTACC +
Preference number: 4 (lower is better)
Translates to: PRDICGFQMKVSPTPDSFKSGTN*SSLSGT
Trigger: GGTACCAGACAGTGATGAGCAGTTTGTTCCTGATTT...AAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCTCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR GCA 90 bp ATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACACAAATGTCCAGGGGCTaGTGGAAGACGGAGCTATGT +
Preference number: 4 (lower is better)
Translates to: ICGFQMKVSPTPDSFICTQMSRG*WKTELC
Trigger: ACATAGCTCCGTCTTCCAGCAGCCCCTGGACATTTG...TGTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR GCA 90 bp TGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACACAGGCACCGACCCCTTCCTaGTTGATGTCTCCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: CGFQMKVSPTPDSFICTQAPTPS*LMSPSN
Trigger: ATTTGAAGGAGACATCAAGCAGGAAGGGGTCGGTGC...CTGTGTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp CATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACCTGGTGGTGGGGCTGTaGAAAGCTAGGTTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: HLWVSDEGFPNTRFIYMYLVVGL*KARFSE
Trigger: TTCAGAAAACCTAGCTTTCCACAGCCCCACCACCAG...GTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp ATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACAGTCTGGCAGATGTGGTaGAGGTGGAAGTACAAACCC +
Preference number: 4 (lower is better)
Translates to: ICGFQMKVSPTPDSFICTVWQMW*RWKYKP
Trigger: GGGTTTGTACTTCCACCTCCACCACATCTGCCAGAC...TGTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CCA 90 bp TTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCAAGGTCTGGCAGATGTaGTGGAGGTGGAAGTACAAA +
Preference number: 4 (lower is better)
Translates to: FQMKVSPTPDSFICTQGSKVWQM*WRWKYK
Trigger: TTTGTACTTCCACCTCCACCACATCTGCCAGACCTT...GCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR TCA 90 bp CATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACCGACCCCTTCCTGCTTaGTGTCTCCTTCAAATTTCT +
Preference number: 4 (lower is better)
Translates to: HLWVSDEGFPNTRFIYMYRPLPA*CLLQIS
Trigger: AGAAATTTGAAGGAGACATCAAGCAGGAAGGGGTCG...GTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR GCA 90 bp TTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCGGATCATGGTATTCTTaGTTAAAGCTCTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: FQMKVSPTPDSFICTQGSGSWYS*LKLCWG
Trigger: TCCCCAGCAGAGCTTTAAGCAAGAATACCATGATCC...GCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp AGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGAACGCAGACATCATCTaGGAATGGTCGCAGAGGTTT +
Preference number: 4 (lower is better)
Translates to: RHLWVSDEGFPNTRFIYMNADII*EWSQRF
Trigger: AAACCTCTGCGACCATTCCCAGATGATGTCTGCGTT...CATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp AGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGAAGGTCTGGCAGATGTaGTGGAGGTGGAAGTACAAA +
Preference number: 4 (lower is better)
Translates to: RHLWVSDEGFPNTRFIYMKVWQM*WRWKYK
Trigger: TTTGTACTTCCACCTCCACCACATCTGCCAGACCTT...CATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR GCA 90 bp CAGAGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATAAATCAGGAACAAACTaGTCATCACTGTCTGGTACC +
Preference number: 4 (lower is better)
Translates to: QRHLWVSDEGFPNTRFIYKSGTN*SSLSGT
Trigger: GGTACCAGACAGTGATGAGCAGTTTGTTCCTGATTT...ATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp GGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACACAGGGCTCATACAGGGGATCATaGTATTCTTGCTTAAAGCTC +
Preference number: 4 (lower is better)
Translates to: GFQMKVSPTPDSFICTQGSYRGS*YSCLKL
Trigger: GAGCTTTAAGCAAGAATACCATGATCCCCTGTATGA...GCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR GCA 90 bp AGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGAAATCAGGAACAAACTaGTCATCACTGTCTGGTACC +
Preference number: 4 (lower is better)
Translates to: RHLWVSDEGFPNTRFIYMKSGTN*SSLSGT
Trigger: GGTACCAGACAGTGATGAGCAGTTTGTTCCTGATTT...CATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CCA 90 bp TTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCGCTAGGTTTTCTGAATaGAAATCAGGAACAAACTGC +
Preference number: 4 (lower is better)
Translates to: FQMKVSPTPDSFICTQGSARFSE*KSGTNC
Trigger: GCAGTTTGTTCCTGATTTCCATTCAGAAAACCTAGC...GCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS TCA 90 bp GGAAGAGATCTTCAGAGTCGAGGGGCGGCAGGGAGCCCGGGTCCATaGGCTTCCCCAGCGGGCCGATCAGCGCTTCGCGCAAGCTCCCAT +
Preference number: 5 (lower is better)
Translates to: GRDLQSRGAAGSPGP*ASPAGRSALRASSH
Trigger: ATGGGAGCTTGCGCGAAGCGCTGATCGGCCCGCTGGGGAAGCTCATGGACCCGGGCTCCCTGCCGCCCCTCGACTCTGAAGATCTCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000585508.5
ENST00000586764.1
ENST00000587151.5
ENST00000590236.5
ENST00000591713.5
CDS-3UTR CAA 90 bp GCCACAGCGTGGGGCAGAGTCCAGGCTTCTGTCTCCCCGCAGTGGGAGATCTGGCCAGGGGCAGGGGACTaGATGGCGATTTGTCTGGGG +
Preference number: 5 (lower is better)
Translates to: ATAWGRVQASVSPQWEIWPGAGD*MAICLG
Trigger: CCCCAGACAAATCGCCATCAAGTCCCCTGCCCCTGG...CCAGATCTCCCACTGCGGGGAGACAGAAGCCTGGACTCTGCCCCACGCTGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS GCA 90 bp GGGCCGATCAGCGCTTCGCGCAAGCTCCCATTTCCGGGCGATTTCTaGGAGAAGCGGGGAGAATGCCCGCGAGTCACCCTGAGGCGCTTA +
Preference number: 5 (lower is better)
Translates to: GPISASRKLPFPGDF*EKRGECPRVTLRRL
Trigger: TAAGCGCCTCAGGGTGACTCGCGGGCATTCTCCCCGCTTCTCGCAGAAATCGCCCGGAAATGGGAGCTTGCGCGAAGCGCTGATCGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585508.5
CDS-3UTR CAA 90 bp GGGGAGCTCAGTGAACCTCCTCACCCTCCTGCCAGTATGAAGTTGGGAAGCGCCCTCCGACAGCTGGTGTaGGTAGGGGGCTGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: GELSEPPHPPASMKLGSALRQLV*VGGWEG
Trigger: CCCCTCCCAGCCCCCTACCAACACCAGCTGTCGGAG...GGCGCTTCCCAACTTCATACTGGCAGGAGGGTGAGGAGGTTCACTGAGCTCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS GCA 90 bp AAGCGGGGGCCGAGACCTGCTCCCAGGAGCCGGGCTCGCCGTTTCTaGTTTCTGCAGCCCTGCTTTACCCGGGCTCGGTTACATAAGAAC +
Preference number: 5 (lower is better)
Translates to: KRGPRPAPRSRARRF*FLQPCFTRARLHKN
Trigger: GTTCTTATGTAACCGAGCCCGGGTAAAGCAGGGCTGCAGAAAGCAGAAACGGCGAGCCCGGCTCCTGGGAGCAGGTCTCGGCCCCCGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587151.5
CDS GCA 90 bp CGCAAGCTCCCATTTCCGGGCGATTTCTGCGAGAAGCGGGGAGAATaGCCGCGAGTCACCCTGAGGCGCTTAGTCTGGGGGACGAGGTTG +
Preference number: 5 (lower is better)
Translates to: RKLPFPGDFCEKRGE*PRVTLRRLVWGTRL
Trigger: CAACCTCGTCCCCCAGACTAAGCGCCTCAGGGTGACTCGCGGGCATTCTCCCCGCTTCTCGCAGAAATCGCCCGGAAATGGGAGCTTGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585508.5
CDS-3UTR CAA 90 bp ACAGAGCACCAAGAACTGACAAACCGGGACCCTCCAGGGCCACAGCGTGGGGCACCAGGGGCAGGGGACTaGATGGCGATTTGTCTGGGG +
Preference number: 5 (lower is better)
Translates to: TEHQELTNRDPPGPQRGAPGAGD*MAICLG
Trigger: CCCCAGACAAATCGCCATCAAGTCCCCTGCCCCTGG...TGCCCCACGCTGTGGCCCTGGAGGGTCCCGGTTTGTCAGTTCTTGGTGCTCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CAA 90 bp GAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCCCAGGGGCAGGGGACTaGATGGCGATTTGTCTGGGG +
Preference number: 5 (lower is better)
Translates to: EQLRVWARATGRTVGICPPGAGD*MAICLG
Trigger: CCCCAGACAAATCGCCATCAAGTCCCCTGCCCCTGG...GGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CAA 90 bp AGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCAGAGACATCCTCCGACAGCTGGTGTaGGTAGGGGGCTGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: RVWARATGRTVGICPRDILRQLV*VGGWEG
Trigger: CCCCTCCCAGCCCCCTACCAACACCAGCTGTCGGAG...GATGTCTCTGGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CAA 90 bp GCCACAGCGTGGGGCAGAGTCCAGGCTTCTGTCTCCCCGCAGTGGGAGATCTGGTCAGGCTCAATGAGCTaGAACTCCATTCCCCGGCCC +
Preference number: 5 (lower is better)
Translates to: ATAWGRVQASVSPQWEIWSGSMS*NSIPRP
Trigger: GGGCCGGGGAATGGAGTTCAAGCTCATTGAGCCTGA...CCAGATCTCCCACTGCGGGGAGACAGAAGCCTGGACTCTGCCCCACGCTGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CAA 90 bp GGGCCACAGCGTGGGGCAGAGTCCAGGCTTCTGTCTCCCCGCAGTGGGAGATCTCCTGCCAGTATGAAGTaGGGAAGCGCCTTCTCTGTC +
Preference number: 5 (lower is better)
Translates to: GPQRGAESRLLSPRSGRSPASMK*GSAFSV
Trigger: GACAGAGAAGGCGCTTCCCAACTTCATACTGGCAGG...AGATCTCCCACTGCGGGGAGACAGAAGCCTGGACTCTGCCCCACGCTGTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CAA 90 bp ACTGACAAACCGGGACCCTCCAGGGCCACAGCGTGGGGCAGAGTCCAGGCTTCTAAGGCAAAGGGTCCCTaGGAGCAGGAACCCATCCCT +
Preference number: 5 (lower is better)
Translates to: TDKPGPSRATAWGRVQASKAKGP*EQEPIP
Trigger: AGGGATGGGTTCCTGCTCCAAGGGACCCTTTGCCTT...AGAAGCCTGGACTCTGCCCCACGCTGTGGCCCTGGAGGGTCCCGGTTTGTCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CAA 90 bp GAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCGAAGGTGTAGGGCACTaGCTGGTCCAAGTATCCGGC +
Preference number: 5 (lower is better)
Translates to: EQLRVWARATGRTVGICPEGVGH*LVQVSG
Trigger: GCCGGATACTTGGACCAGCAAGTGCCCTACACCTTC...GGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000545089.5
ENST00000591713.5
CDS-3UTR CAA 90 bp TCTGCTTATACCCAGCACCCCTCATCCCAGGTTCCTTTCTTCAACCTCCGCCTGCTCCGACAGCTGGTGTaGGTAGGGGGCTGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: SAYTQHPSSQVPFFNLRLLRQLV*VGGWEG
Trigger: CCCCTCCCAGCCCCCTACCAACACCAGCTGTCGGAG...CAGGCGGAGGTTGAAGAAAGGAACCTGGGATGAGGGGTGCTGGGTATAAGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CAA 90 bp GTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCTCCGTCTGTTCCTGTTaGATCACCACCCCCGCCCCT +
Preference number: 5 (lower is better)
Translates to: VSSSESGLGQLVGQWGSASVCSC*ITTPAP
Trigger: AGGGGCGGGGGTGGTGATCAAACAGGAACAGACGGA...GGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CAA 90 bp TACCCAGCACCCCTCATCCCAGGTTCCTTTCTTCAACCTCCGCCTGCCTCTGGGCAAGGCCACCAGAAATaGCCACAGCTGCAGGGCACC +
Preference number: 5 (lower is better)
Translates to: YPAPLIPGSFLQPPPASGQGHQK*PQLQGT
Trigger: GGTGCCCTGCAGCTGTGGCAATTTCTGGTGGCCTTG...CCCAGAGGCAGGCGGAGGTTGAAGAAAGGAACCTGGGATGAGGGGTGCTGGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CAA 90 bp CTTCCCAATGACTCCGGTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGTCCGTCTGTTCCTGTTaGATCACCACCCCCGCCCCT +
Preference number: 5 (lower is better)
Translates to: LPNDSGEQLRVWARATGRSVCSC*ITTPAP
Trigger: AGGGGCGGGGGTGGTGATCAAACAGGAACAGACGGA...CCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCACCGGAGTCATTGGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS GCA 90 bp CATTTCCGGGCGATTTCTGCTCCCAGGAGCCGGGCTCGCCGTTTCTaGTTTCTGCAGCCCTGCTTTACCCGGGCTCGGTTACATAAGAAC +
Preference number: 5 (lower is better)
Translates to: HFRAISAPRSRARRF*FLQPCFTRARLHKN
Trigger: GTTCTTATGTAACCGAGCCCGGGTAAAGCAGGGCTGCAGAAAGCAGAAACGGCGAGCCCGGCTCCTGGGAGCAGAAATCGCCCGGAAATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538265.5
CDS CCA 90 bp AGCCAGGGGATCAGGTGTGGCTGTCTTTGGGTGACGGGGAGCAACTaGGCTACAGTTGCTGGGACTGATACTGCCTCCTCTGTGAAGCCT +
Preference number: 5 (lower is better)
Translates to: SQGIRCGCLWVTGSN*ATVAGTDTASSVKP
Trigger: AGGCTTCACAGAGGAGGCAGTATCAGTCCCAGCAACTGTAGCCCAGTTGCTCCCCGTCACCCAAAGACAGCCACACCTGATCCCCTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586764.1
CDS-3UTR CAA 90 bp CCTCCTGCCAGTATGAAGTTGGGAAGCGCCTTCTCTGTCCCCCAGAACAGAACACCCCAGCGCACCGACTaGTTTTTCGGGCGCAGCAGA +
Preference number: 5 (lower is better)
Translates to: PPASMKLGSAFSVPQNRTPQRTD*FFGRSR
Trigger: TCTGCTGCGCCCGAAAAACAAGTCGGTGCGCTGGGG...TGTTCTGTTCTGGGGGACAGAGAAGGCGCTTCCCAACTTCATACTGGCAGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000319349.10
CDS-3UTR CAA 90 bp CTCCAGGGCCCAGGTGAAACCCCCAGGGGAGTTTCTGAGACTCTAGACTTGCCAGAAGGTGTAGGGCACTaGCTGGTCCAAGTATCCGGC +
Preference number: 5 (lower is better)
Translates to: LQGPGETPRGVSETLDLPEGVGH*LVQVSG
Trigger: GCCGGATACTTGGACCAGCAAGTGCCCTACACCTTC...TGGCAAGTCTAGAGTCTCAGAAACTCCCCTGGGGGTTTCACCTGGGCCCTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319349.10
ENST00000393664.6
CDS-3UTR CAA 90 bp AGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCAGAGACATCTCTCAGGAAATTCCGTaGCTCTGCCCGGGGAAAGGG +
Preference number: 5 (lower is better)
Translates to: RVWARATGRTVGICPRDISQEIP*LCPGKG
Trigger: CCCTTTCCCCGGGCAGAGCAACGGAATTTCCTGAGA...GATGTCTCTGGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CAA 90 bp TTTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCACCCACCTGCGGCCTCCGACAGCTGGTGTaGGTAGGGGGCTGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: FPQHQIHLYVHRAAPTCGLRQLV*VGGWEG
Trigger: CCCCTCCCAGCCCCCTACCAACACCAGCTGTCGGAG...GCCGCAGGTGGGTGCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CAA 90 bp TCCTTCCCAATGACTCCGGTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTACAAGGCCACCAGAAATaGCCACAGCTGCAGGGCACC +
Preference number: 5 (lower is better)
Translates to: SFPMTPVSSSESGLGQLVQGHQK*PQLQGT
Trigger: GGTGCCCTGCAGCTGTGGCAATTTCTGGTGGCCTTG...TACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCACCGGAGTCATTGGGAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CAA 90 bp AGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCAGAGACATCTCAGGCTCAATGAGCTaGAACTCCATTCCCCGGCCC +
Preference number: 5 (lower is better)
Translates to: RVWARATGRTVGICPRDISGSMS*NSIPRP
Trigger: GGGCCGGGGAATGGAGTTCAAGCTCATTGAGCCTGA...GATGTCTCTGGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CAA 90 bp TCATCCCAGGTTCCTTTCTTCAACCTCCGCCTGCCTCTGGGAACACAGAGCACCGAAGGTGTAGGGCACTaGCTGGTCCAAGTATCCGGC +
Preference number: 5 (lower is better)
Translates to: SSQVPFFNLRLPLGTQSTEGVGH*LVQVSG
Trigger: GCCGGATACTTGGACCAGCAAGTGCCCTACACCTTC...GGTGCTCTGTGTTCCCAGAGGCAGGCGGAGGTTGAAGAAAGGAACCTGGGATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319349.10
ENST00000393664.6
CDS-3UTR CAA 90 bp CCCAACACCAGATTCATTTATATGTACACAGGGCAGCACCCACCTGCGGCAGGGTCCGTCTGTTCCTGTTaGATCACCACCCCCGCCCCT +
Preference number: 5 (lower is better)
Translates to: PNTRFIYMYTGQHPPAAGSVCSC*ITTPAP
Trigger: AGGGGCGGGGGTGGTGATCAAACAGGAACAGACGGA...CCCTGCCGCAGGTGGGTGCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CAA 90 bp TCCTTCCCAATGACTCCGGTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTATCAGGCTCAATGAGCTaGAACTCCATTCCCCGGCCC +
Preference number: 5 (lower is better)
Translates to: SFPMTPVSSSESGLGQLVSGSMS*NSIPRP
Trigger: GGGCCGGGGAATGGAGTTCAAGCTCATTGAGCCTGA...TACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCACCGGAGTCATTGGGAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CAA 90 bp GTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCGGGATCATGGTATTCTaGCTTAAAGCTCTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: VSSSESGLGQLVGQWGSAGIMVF*LKALLG
Trigger: CCCCAGCAGAGCTTTAAGCAAGAATACCATGATCCC...GGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CAA 90 bp GGTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCGACCCCTTCCTGCTaGATGTCTCCTTCAAATTTC +
Preference number: 5 (lower is better)
Translates to: GEQLRVWARATGRTVGICPTPSC*MSPSNF
Trigger: GAAATTTGAAGGAGACATCAAGCAGGAAGGGGTCGG...GCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CAA 90 bp AGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCAGAGCCGACCCCTTCCTGCTaGATGTCTCCTTCAAATTTC +
Preference number: 5 (lower is better)
Translates to: SSESGLGQLVGQWGSAPEPTPSC*MSPSNF
Trigger: GAAATTTGAAGGAGACATCAAGCAGGAAGGGGTCGG...CTCTGGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGACTCTGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CAA 90 bp CCCAACACCAGATTCATTTATATGTACACAGGGCAGCACCCACCTGCGGCAGGGTCAGGCTCAATGAGCTaGAACTCCATTCCCCGGCCC +
Preference number: 5 (lower is better)
Translates to: PNTRFIYMYTGQHPPAAGSGSMS*NSIPRP
Trigger: GGGCCGGGGAATGGAGTTCAAGCTCATTGAGCCTGA...CCCTGCCGCAGGTGGGTGCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CAA 90 bp CTTCAACCTCCGCCTGCCTCTGGGAACACAGAGCACCAAGAACTGACAAACCGGCCTGCCAGTATGAAGTaGGGAAGCGCCTTCTCTGTC +
Preference number: 5 (lower is better)
Translates to: LQPPPASGNTEHQELTNRPASMK*GSAFSV
Trigger: GACAGAGAAGGCGCTTCCCAACTTCATACTGGCAGG...CCGGTTTGTCAGTTCTTGGTGCTCTGTGTTCCCAGAGGCAGGCGGAGGTTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CAA 90 bp GTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCAGAGACATCTGTGGGATCATGGTATTCTaGCTTAAAGCTCTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: VWARATGRTVGICPRDICGIMVF*LKALLG
Trigger: CCCCAGCAGAGCTTTAAGCAAGAATACCATGATCCC...ACAGATGTCTCTGGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CAA 90 bp TTTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCACCCACCTGCGGCTCCGTCTGTTCCTGTTaGATCACCACCCCCGCCCCT +
Preference number: 5 (lower is better)
Translates to: FPQHQIHLYVHRAAPTCGSVCSC*ITTPAP
Trigger: AGGGGCGGGGGTGGTGATCAAACAGGAACAGACGGA...GCCGCAGGTGGGTGCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CAA 90 bp GGTTTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCACCCACCTGCGTCCGTCTGTTCCTGTTaGATCACCACCCCCGCCCCT +
Preference number: 5 (lower is better)
Translates to: GFPNTRFIYMYTGQHPPASVCSC*ITTPAP
Trigger: AGGGGCGGGGGTGGTGATCAAACAGGAACAGACGGA...CGCAGGTGGGTGCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CAA 90 bp GTCTGGGCTAGGGCAACTGGTAGGACAGTGGGGATCTGCCCCAGAGACATCTGTCCGACCCCTTCCTGCTaGATGTCTCCTTCAAATTTC +
Preference number: 5 (lower is better)
Translates to: VWARATGRTVGICPRDICPTPSC*MSPSNF
Trigger: GAAATTTGAAGGAGACATCAAGCAGGAAGGGGTCGG...ACAGATGTCTCTGGGGCAGATCCCCACTGTCCTACCAGTTGCCCTAGCCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CAA 90 bp TTCCTTTCTTCAACCTCCGCCTGCCTCTGGGAACACAGAGCACCAAGAACTGACAAGGCAAAGGGTCCCTaGGAGCAGGAACCCATCCCT +
Preference number: 5 (lower is better)
Translates to: FLSSTSACLWEHRAPRTDKAKGP*EQEPIP
Trigger: AGGGATGGGTTCCTGCTCCAAGGGACCCTTTGCCTT...GTCAGTTCTTGGTGCTCTGTGTTCCCAGAGGCAGGCGGAGGTTGAAGAAAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CAA 90 bp TTTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCACCCACCTGCGGCTCTCAGGAAATTCCGTaGCTCTGCCCGGGGAAAGGG +
Preference number: 5 (lower is better)
Translates to: FPQHQIHLYVHRAAPTCGSQEIP*LCPGKG
Trigger: CCCTTTCCCCGGGCAGAGCAACGGAATTTCCTGAGA...GCCGCAGGTGGGTGCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CAA 90 bp TCCTTCCCAATGACTCCGGTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTAGGGATCATGGTATTCTaGCTTAAAGCTCTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: SFPMTPVSSSESGLGQLVGIMVF*LKALLG
Trigger: CCCCAGCAGAGCTTTAAGCAAGAATACCATGATCCC...TACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCACCGGAGTCATTGGGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CAA 90 bp GGTTTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCACCCACCTGCGTCAGGCTCAATGAGCTaGAACTCCATTCCCCGGCCC +
Preference number: 5 (lower is better)
Translates to: GFPNTRFIYMYTGQHPPASGSMS*NSIPRP
Trigger: GGGCCGGGGAATGGAGTTCAAGCTCATTGAGCCTGA...CGCAGGTGGGTGCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS CCA 90 bp GTCTCCTTCAAATTTCTCAGGGACAACGCAGACATCATCTGGGAATaGTCGCAGAGGTTTCTCATAGCCATAGCCCATGGCCCCGTCACC +
Preference number: 5 (lower is better)
Translates to: VSFKFLRDNADIIWE*SQRFLIAIAHGPVT
Trigger: GGTGACGGGGCCATGGGCTATGGCTATGAGAAACCTCTGCGACCATTCCCAGATGATGTCTGCGTTGTCCCTGAGAAATTTGAAGGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000586826.1
ENST00000591713.5
CDS-3UTR CAA 90 bp TTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCCTCCGACAGCTGGTGTaGGTAGGGGGCTGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: FQMKVSPTPDSFICTQGSLRQLV*VGGWEG
Trigger: CCCCTCCCAGCCCCCTACCAACACCAGCTGTCGGAG...GCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CAA 90 bp CCCCAGAGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTCAAGGCCACCAGAAATaGCCACAGCTGCAGGGCACC +
Preference number: 5 (lower is better)
Translates to: PQRHLWVSDEGFPNTRFIQGHQK*PQLQGT
Trigger: GGTGCCCTGCAGCTGTGGCAATTTCTGGTGGCCTTG...AATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCTCTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CAA 90 bp TTTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCACCCACCTGCGGCCCTGCCAGTATGAAGTaGGGAAGCGCCTTCTCTGTC +
Preference number: 5 (lower is better)
Translates to: FPQHQIHLYVHRAAPTCGPASMK*GSAFSV
Trigger: GACAGAGAAGGCGCTTCCCAACTTCATACTGGCAGG...GCCGCAGGTGGGTGCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CAA 90 bp TCCTTCCCAATGACTCCGGTGAGCAGCTCAGAGTCTGGGCTAGGGCAACTGGTATCTGAGACTCTAGACTaGCCATTTCTCCACTTTTCC +
Preference number: 5 (lower is better)
Translates to: SFPMTPVSSSESGLGQLVSETLD*PFLHFS
Trigger: GGAAAAGTGGAGAAATGGCAAGTCTAGAGTCTCAGA...TACCAGTTGCCCTAGCCCAGACTCTGAGCTGCTCACCGGAGTCATTGGGAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
CDS CCA 90 bp CTTGATGTCTCCTTCAAATTTCTCAGGGACAACGCAGACATCATCTaGGAATGGTCGCAGAGGTTTCTCATAGCCATAGCCCATGGCCCC +
Preference number: 5 (lower is better)
Translates to: LDVSFKFLRDNADII*EWSQRFLIAIAHGP
Trigger: GGGGCCATGGGCTATGGCTATGAGAAACCTCTGCGACCATTCCCAGATGATGTCTGCGTTGTCCCTGAGAAATTTGAAGGAGACATCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000586826.1
ENST00000591713.5
CDS-3UTR CAA 90 bp TTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCCCAGGGGCAGGGGACTaGATGGCGATTTGTCTGGGG +
Preference number: 5 (lower is better)
Translates to: FQMKVSPTPDSFICTQGSPGAGD*MAICLG
Trigger: CCCCAGACAAATCGCCATCAAGTCCCCTGCCCCTGG...GCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CAA 90 bp TTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCACCCACCTGCGGCAGGGATCATGGTATTCTaGCTTAAAGCTCTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: FPNTRFIYMYTGQHPPAAGIMVF*LKALLG
Trigger: CCCCAGCAGAGCTTTAAGCAAGAATACCATGATCCC...TGCCGCAGGTGGGTGCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CAA 90 bp TTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCACCCACCTGCGGCACCGACCCCTTCCTGCTaGATGTCTCCTTCAAATTTC +
Preference number: 5 (lower is better)
Translates to: FPNTRFIYMYTGQHPPAAPTPSC*MSPSNF
Trigger: GAAATTTGAAGGAGACATCAAGCAGGAAGGGGTCGG...TGCCGCAGGTGGGTGCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CAA 90 bp GGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACACAGGGCCAAGGCCACCAGAAATaGCCACAGCTGCAGGGCACC +
Preference number: 5 (lower is better)
Translates to: GFQMKVSPTPDSFICTQGQGHQK*PQLQGT
Trigger: GGTGCCCTGCAGCTGTGGCAATTTCTGGTGGCCTTG...GCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS TCA 90 bp TCCTATCCACATTCAAGAATTTCTTCCTTCCAGCCTGCTTCCTGGTaGCTGTTCTTTGCCCAGGTTGCCTGCCAACCACAAAATCCCAGG +
Preference number: 5 (lower is better)
Translates to: SYPHSRISSFQPASW*LFFAQVACQPQNPR
Trigger: CCTGGGATTTTGTGGTTGGCAGGCAACCTGGGCAAAGAACAGTCACCAGGAAGCAGGCTGGAAGGAAGAAATTCTTGAATGTGGATAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586826.1
CDS-3UTR CAA 90 bp GGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACACAGGGCTCTCAGGAAATTCCGTaGCTCTGCCCGGGGAAAGGG +
Preference number: 5 (lower is better)
Translates to: GFQMKVSPTPDSFICTQGSQEIP*LCPGKG
Trigger: CCCTTTCCCCGGGCAGAGCAACGGAATTTCCTGAGA...GCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CAA 90 bp CAGAGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATCAAGGCCACCAGAAATaGCCACAGCTGCAGGGCACC +
Preference number: 5 (lower is better)
Translates to: QRHLWVSDEGFPNTRFIYQGHQK*PQLQGT
Trigger: GGTGCCCTGCAGCTGTGGCAATTTCTGGTGGCCTTG...ATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CAA 90 bp TTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACACAGGGCAGCTCTCAGGAAATTCCGTaGCTCTGCCCGGGGAAAGGG +
Preference number: 5 (lower is better)
Translates to: FQMKVSPTPDSFICTQGSSQEIP*LCPGKG
Trigger: CCCTTTCCCCGGGCAGAGCAACGGAATTTCCTGAGA...GCTGCCCTGTGTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CAA 90 bp TGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACACAGTCCGTCTGTTCCTGTTaGATCACCACCCCCGCCCCT +
Preference number: 5 (lower is better)
Translates to: CGFQMKVSPTPDSFICTQSVCSC*ITTPAP
Trigger: AGGGGCGGGGGTGGTGATCAAACAGGAACAGACGGA...CTGTGTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CAA 90 bp CAGAGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATTCAGGCTCAATGAGCTaGAACTCCATTCCCCGGCCC +
Preference number: 5 (lower is better)
Translates to: QRHLWVSDEGFPNTRFIYSGSMS*NSIPRP
Trigger: GGGCCGGGGAATGGAGTTCAAGCTCATTGAGCCTGA...ATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CAA 90 bp TGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACACAGGAAGGTGTAGGGCACTaGCTGGTCCAAGTATCCGGC +
Preference number: 5 (lower is better)
Translates to: CGFQMKVSPTPDSFICTQEGVGH*LVQVSG
Trigger: GCCGGATACTTGGACCAGCAAGTGCCCTACACCTTC...CTGTGTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000545089.5
ENST00000591713.5
CDS-3UTR CAA 90 bp ATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACACAAGGCCACCAGAAATaGCCACAGCTGCAGGGCACC +
Preference number: 5 (lower is better)
Translates to: ICGFQMKVSPTPDSFICTQGHQK*PQLQGT
Trigger: GGTGCCCTGCAGCTGTGGCAATTTCTGGTGGCCTTG...TGTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CAA 90 bp GAAGTGGGGGCCTTTATTAAGGTCTGGCAGATGTGGTGGAGGTGGAAGTACAAATCTGAGACTCTAGACTaGCCATTTCTCCACTTTTCC +
Preference number: 5 (lower is better)
Translates to: EVGAFIKVWQMWWRWKYKSETLD*PFLHFS
Trigger: GGAAAAGTGGAGAAATGGCAAGTCTAGAGTCTCAGA...TTTGTACTTCCACCTCCACCACATCTGCCAGACCTTAATAAAGGCCCCCACTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
CDS-3UTR CAA 90 bp AGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGGGGATCATGGTATTCTaGCTTAAAGCTCTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: RHLWVSDEGFPNTRFIYMGIMVF*LKALLG
Trigger: CCCCAGCAGAGCTTTAAGCAAGAATACCATGATCCC...CATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CAA 90 bp AGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGCCGACCCCTTCCTGCTaGATGTCTCCTTCAAATTTC +
Preference number: 5 (lower is better)
Translates to: RHLWVSDEGFPNTRFIYMPTPSC*MSPSNF
Trigger: GAAATTTGAAGGAGACATCAAGCAGGAAGGGGTCGG...CATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CAA 90 bp TGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACACAGCCGACCCCTTCCTGCTaGATGTCTCCTTCAAATTTC +
Preference number: 5 (lower is better)
Translates to: CGFQMKVSPTPDSFICTQPTPSC*MSPSNF
Trigger: GAAATTTGAAGGAGACATCAAGCAGGAAGGGGTCGG...CTGTGTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CAA 90 bp ATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACAGGGATCATGGTATTCTaGCTTAAAGCTCTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: ICGFQMKVSPTPDSFICTGIMVF*LKALLG
Trigger: CCCCAGCAGAGCTTTAAGCAAGAATACCATGATCCC...TGTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS-3UTR CAA 90 bp AGAGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATCTGAGACTCTAGACTaGCCATTTCTCCACTTTTCC +
Preference number: 5 (lower is better)
Translates to: RDICGFQMKVSPTPDSFISETLD*PFLHFS
Trigger: GGAAAAGTGGAGAAATGGCAAGTCTAGAGTCTCAGA...TATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
CDS-3UTR CAA 90 bp AGACATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTCTGAGACTCTAGACTaGCCATTTCTCCACTTTTCC +
Preference number: 5 (lower is better)
Translates to: RHLWVSDEGFPNTRFIYMSETLD*PFLHFS
Trigger: GGAAAAGTGGAGAAATGGCAAGTCTAGAGTCTCAGA...CATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGATGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
CDS-3UTR CAA 90 bp ATCTGTGGGTTTCAGATGAAGGTTTCCCCAACACCAGATTCATTTATATGTACATCTGAGACTCTAGACTaGCCATTTCTCCACTTTTCC +
Preference number: 5 (lower is better)
Translates to: ICGFQMKVSPTPDSFICTSETLD*PFLHFS
Trigger: GGAAAAGTGGAGAAATGGCAAGTCTAGAGTCTCAGA...TGTACATATAAATGAATCTGGTGTTGGGGAAACCTTCATCTGAAACCCACAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
CDS TCA 72 bp CTTCAGAGTCGAGGGGCGGCAGGGAGCCCGGGTCCATaGGCTTCCCCAGCGGGCCGATCAGCGCTTCGCGCA +
Preference number: 6 (lower is better)
Translates to: LQSRGAAGSPGP*ASPAGRSALRA
Trigger: TGCGCGAAGCGCTGATCGGCCCGCTGGGGAAGCTCATGGACCCGGGCTCCCTGCCGCCCCTCGACTCTGAAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000585508.5
ENST00000586764.1
ENST00000587151.5
ENST00000590236.5
ENST00000591713.5
CDS GCA 72 bp GCTCGCCATGGTGGTAGGGGAGTGGCGGCTTCCTGCTaGAGGACAGGGCCGGGTCTGTGCGGGGACTCTGGG +
Preference number: 6 (lower is better)
Translates to: ARHGGRGVAASC*RTGPGLCGDSG
Trigger: CCCAGAGTCCCCGCACAGACCCGGCCCTGTCCTGCAGCAGGAAGCCGCCACTCCCCTACCACCATGGCGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000585508.5
ENST00000590236.5
ENST00000591713.5
CDS GCA 72 bp ACTGCTCGCCATGGTGGTAGGGGAGTGGCGGCTTCCTaGTGCAGGACAGGGCCGGGTCTGTGCGGGGACTCT +
Preference number: 6 (lower is better)
Translates to: TARHGGRGVAAS*CRTGPGLCGDS
Trigger: AGAGTCCCCGCACAGACCCGGCCCTGTCCTGCAGCAGGAAGCCGCCACTCCCCTACCACCATGGCGAGCAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000585508.5
ENST00000590236.5
ENST00000591713.5
CDS CAA 90 bp CGTGGAGGCCGGCGCGGCGCTCACGCTGCTGAAGGTGTAGGGCACTaGCTGGTCCAAGTATCCGGCTTTCATCCTCCGCTCCATCCGGCC +
Preference number: 6 (lower is better)
Translates to: RGGRRGAHAAEGVGH*LVQVSGFHPPLHPA
Trigger: GGCCGGATGGAGCGGAGGATGAAAGCCGGATACTTGGACCAGCAAGTGCCCTACACCTTCAGCAGCGTGAGCGCCGCGCCGGCCTCCACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585508.5
CDS CCA 72 bp GAACAGCCGCTGGGGGCTAGTAAGAGTAGCCACCCTTaGGGCCAAATGGCTGGGCGGGGCCAGCCAGCTCTG +
Preference number: 6 (lower is better)
Translates to: EQPLGASKSSHP*GQMAGRGQPAL
Trigger: CAGAGCTGGCTGGCCCCGCCCAGCCATTTGGCCCCAAGGGTGGCTACTCTTACTAGCCCCCAGCGGCTGTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000586826.1
ENST00000591713.5
CDS GCA 72 bp CCGAGACCTGCTCCCAGGAGCCGGGCTCGCCGTTTCTaGTTTCTGCAGCCCTGCTTTACCCGGGCTCGGTTA +
Preference number: 6 (lower is better)
Translates to: PRPAPRSRARRF*FLQPCFTRARL
Trigger: TAACCGAGCCCGGGTAAAGCAGGGCTGCAGAAAGCAGAAACGGCGAGCCCGGCTCCTGGGAGCAGGTCTCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587151.5
CDS GCA 72 bp CCATTTCCGGGCGATTTCTGCGAGAAGCGGGGAGAATaGCCGCGAGTCACCCTGAGGCGCTTAGTCTGGGGG +
Preference number: 6 (lower is better)
Translates to: PFPGDFCEKRGE*PRVTLRRLVWG
Trigger: CCCCCAGACTAAGCGCCTCAGGGTGACTCGCGGGCATTCTCCCCGCTTCTCGCAGAAATCGCCCGGAAATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585508.5
CDS GCA 72 bp AGCGCTTCGCGCAAGCTCCCATTTCCGGGCGATTTCTaGGAGAAGCGGGGAGAATGCCCGCGAGTCACCCTG +
Preference number: 6 (lower is better)
Translates to: SASRKLPFPGDF*EKRGECPRVTL
Trigger: CAGGGTGACTCGCGGGCATTCTCCCCGCTTCTCGCAGAAATCGCCCGGAAATGGGAGCTTGCGCGAAGCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585508.5
CDS CAA 72 bp CGGCGCGGCGCTCACGCTGCTGAAGGTGTAGGGCACTaGCTGGTCCAAGTATCCGGCTTTCATCCTCCGCTC +
Preference number: 6 (lower is better)
Translates to: RRGAHAAEGVGH*LVQVSGFHPPL
Trigger: GAGCGGAGGATGAAAGCCGGATACTTGGACCAGCAAGTGCCCTACACCTTCAGCAGCGTGAGCGCCGCGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585508.5
CDS CAA 72 bp CCCAGAGGGAGTGTGATGCTGGAACCCCTCCTCAACTaGAGGGCTGCGGCTGAGGCCATGGAAGGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: PRGSVMLEPLLN*RAAAEAMEGSS
Trigger: GCTGCTGCCTTCCATGGCCTCAGCCGCAGCCCTCAAGTTGAGGAGGGGTTCCAGCATCACACTCCCTCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586826.1
CDS CAA 90 bp GAAAGTTCACCCAGAGGGAGTGTGATGCTGGAACCCCTCCTCAACTaGAGGGCTGCGGCTGAGGCCATGGAAGGCAGCAGCGGGGGCTGG +
Preference number: 6 (lower is better)
Translates to: ESSPRGSVMLEPLLN*RAAAEAMEGSSGGW
Trigger: CCAGCCCCCGCTGCTGCCTTCCATGGCCTCAGCCGCAGCCCTCAAGTTGAGGAGGGGTTCCAGCATCACACTCCCTCTGGGTGAACTTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586826.1
CDS GCA 72 bp GGCTGGGAGGTGCCAGAGGATCTCAGGAAATTCCGTTaGTCTGCCCGGGGAAAGGGCTGTAGGGGCGACTGT +
Preference number: 6 (lower is better)
Translates to: GWEVPEDLRKFR*SARGKGCRGDC
Trigger: ACAGTCGCCCCTACAGCCCTTTCCCCGGGCAGAGCAACGGAATTTCCTGAGATCCTCTGGCACCTCCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545954.5
ENST00000590236.5
ENST00000591713.5
CDS GCA 72 bp GCGATTTCTGCTCCCAGGAGCCGGGCTCGCCGTTTCTaGTTTCTGCAGCCCTGCTTTACCCGGGCTCGGTTA +
Preference number: 6 (lower is better)
Translates to: AISAPRSRARRF*FLQPCFTRARL
Trigger: TAACCGAGCCCGGGTAAAGCAGGGCTGCAGAAAGCAGAAACGGCGAGCCCGGCTCCTGGGAGCAGAAATCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538265.5
CDS TCA 72 bp CATCTGAGTCGTAGGCGAAGTCCGTCTGTTCCTGTTTaGTCACCACCCCCGCCCCTGGGTACCTGTGCCCAT +
Preference number: 6 (lower is better)
Translates to: HLSRRRSPSVPV*SPPPPLGTCAH
Trigger: ATGGGCACAGGTACCCAGGGGCGGGGGTGGTGATCAAACAGGAACAGACGGACTTCGCCTACGACTCAGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS CCA 72 bp ATGGTATTCTTGCTTAAAGCTCTGCTGGGGATAGGGTaGGCAGGGCTCCGACAGCTGGTGTTGGTAGGGGGC +
Preference number: 6 (lower is better)
Translates to: MVFLLKALLGIG*AGLRQLVLVGG
Trigger: GCCCCCTACCAACACCAGCTGTCGGAGCCCTGCCCACCCTATCCCCAGCAGAGCTTTAAGCAAGAATACCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000591713.5
CDS CCA 72 bp CTCACTGACAGGCCGGTCAAACTCAGCCTTGAGAGCTaGACGCTGATTGTCCGGGAAGGCCAAAGAGAAGAG +
Preference number: 6 (lower is better)
Translates to: LTDRPVKLSLES*TLIVREGQREE
Trigger: CTCTTCTCTTTGGCCTTCCCGGACAATCAGCGTCCAGCTCTCAAGGCTGAGTTTGACCGGCCTGTCAGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000586826.1
ENST00000591713.5
CDS CAA 72 bp ATTTCCGGGCGATTTGCTGCTGAAGGTGTAGGGCACTaGCTGGTCCAAGTATCCGGCTTTCATCCTCCGCTC +
Preference number: 6 (lower is better)
Translates to: ISGRFAAEGVGH*LVQVSGFHPPL
Trigger: GAGCGGAGGATGAAAGCCGGATACTTGGACCAGCAAGTGCCCTACACCTTCAGCAGCAAATCGCCCGGAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000545089.5
ENST00000586764.1
ENST00000587151.5
ENST00000591713.5
CDS CCA 72 bp TCCTTCAAATTTCTCAGGGACAACGCAGACATCATCTaGGAATGGTCGCAGAGGTTTCTCATAGCCATAGCC +
Preference number: 6 (lower is better)
Translates to: SFKFLRDNADII*EWSQRFLIAIA
Trigger: GGCTATGGCTATGAGAAACCTCTGCGACCATTCCCAGATGATGTCTGCGTTGTCCCTGAGAAATTTGAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000319349.10
ENST00000393664.6
ENST00000538265.5
ENST00000545089.5
ENST00000545954.5
ENST00000586826.1
ENST00000591713.5