RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ETV1 (Homo sapiens)

Ensembl gene IDs: ENSG00000006468

Ensembl transcript IDs: ENST00000242066.9, ENST00000399357.7, ENST00000403527.5, ENST00000403685.5, ENST00000405192.6, ENST00000405218.6, ENST00000405358.8, ENST00000420159.6, ENST00000421381.5, ENST00000430479.6, ENST00000431887.5, ENST00000433547.1, ENST00000438956.5, ENST00000443137.5, ENST00000443608.5, ENST00000460438.5, ENST00000472931.6, ENST00000476355.5, ENST00000476720.6, ENST00000483075.1, ENST00000485475.1, ENST00000497115.5

Found 879 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGTGGCACCAGATACACGTAATGCTACTGGCCTATGACTCAGTTTaGCGCCAGAGTCCAAAATTGTGCCCCTCATTTACAGTCATGGTG +
Preference number: 1 (lower is better)
Translates to: RWHQIHVMLLAYDSV*RQSPKLCPSFTVMV
Trigger: CACCATGACTGTAAATGAGGGGCACAATTTTGGACTCTGGCGCCAAACTGAGTCATAGGCCAGTAGCATTACGTGTATCTGGTGCCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
3UTR TCA 90 bp CTAAACAGCAAGGTGGCACCAGATACACGTAATGCTACTGGCCTATaGCTCAGTTTGGCGCCAGAGTCCAAAATTGTGCCCCTCATTTAC +
Preference number: 1 (lower is better)
Translates to: LNSKVAPDTRNATGL*LSLAPESKIVPLIY
Trigger: GTAAATGAGGGGCACAATTTTGGACTCTGGCGCCAAACTGAGTCATAGGCCAGTAGCATTACGTGTATCTGGTGCCACCTTGCTGTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
3UTR CCA 90 bp AGCCAAAGGGACTTGGCACACGTCATTAAGTTAAGGATCTTGAGATaGAGAGATTGTCCTGGATTATCTGAGCATCCCCTAAATGTAATC +
Preference number: 1 (lower is better)
Translates to: SQRDLAHVIKLRILR*RDCPGLSEHPLNVI
Trigger: GATTACATTTAGGGGATGCTCAGATAATCCAGGACAATCTCTCCATCTCAAGATCCTTAACTTAATGACGTGTGCCAAGTCCCTTTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
3UTR TCA 90 bp TACAGCATCTACGGGAAACTAGACCTCCAAGATCCGCCCATGATTTaGGAAAAATGTTCTGCACTGTCAGTCTTGTGGATTTTTATTCTG +
Preference number: 1 (lower is better)
Translates to: YSIYGKLDLQDPPMI*EKCSALSVLWIFIL
Trigger: CAGAATAAAAATCCACAAGACTGACAGTGCAGAACATTTTTCTCAAATCATGGGCGGATCTTGGAGGTCTAGTTTCCCGTAGATGCTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR TCA 90 bp GTGGGGGTTGCAGCAGCCCCCTTCCGGCATGTAGGCCATGCTCTCATCAAAGTGGCTGGCCTGTTTTTCTaGATGCCCCAACGTCGGGCC +
Preference number: 2 (lower is better)
Translates to: VGVAAAPFRHVGHALIKVAGLFF*MPQRRA
Trigger: GGCCCGACGTTGGGGCATTCAGAAAAACAGGCCAGC...CACTTTGATGAGAGCATGGCCTACATGCCGGAAGGGGGCTGCTGCAACCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000443137.5
3UTR-3UTR TCA 90 bp GGTTGCAGCAGCCCCCTTCCGGCATGTAGGCCATGCTCTCATCAAAGTGAGAAATCCTCCTCGTTGATGTaGCGTTCCATGTCTGTCTTC +
Preference number: 2 (lower is better)
Translates to: GCSSPLPACRPCSHQSEKSSSLM*RSMSVF
Trigger: GAAGACAGACATGGAACGTCACATCAACGAGGAGGA...TTTCTCACTTTGATGAGAGCATGGCCTACATGCCGGAAGGGGGCTGCTGCAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443137.5
3UTR-3UTR TCA 90 bp CAAAGGGACTTGGCACACGTCATTAAGTTAAGGATCTTGAGATGGAGAGATTGTAATGCTACTGGCCTATaGCTCAGTTTGGCGCCAGAG +
Preference number: 2 (lower is better)
Translates to: QRDLAHVIKLRILRWRDCNATGL*LSLAPE
Trigger: CTCTGGCGCCAAACTGAGTCATAGGCCAGTAGCATT...ACAATCTCTCCATCTCAAGATCCTTAACTTAATGACGTGTGCCAAGTCCCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR TCA 90 bp CAAAGGGACTTGGCACACGTCATTAAGTTAAGGATCTTGAGATGGAGAGATTGTAAGCAGAGATTGAAGTaGTGTAGCCAGGAGCCAAGG +
Preference number: 2 (lower is better)
Translates to: QRDLAHVIKLRILRWRDCKQRLK*CSQEPR
Trigger: CCTTGGCTCCTGGCTACATCACTTCAATCTCTGCTT...ACAATCTCTCCATCTCAAGATCCTTAACTTAATGACGTGTGCCAAGTCCCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR TCA 90 bp GAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAGCAGAGACTCATAAATaGCAGGGGAAAATGCCCAAG +
Preference number: 2 (lower is better)
Translates to: EAGRKFDYSRRVCDHGSRAETHK*QGKMPK
Trigger: CTTGGGCATTTTCCCCTGTCATTTATGAGTCTCTGC...TCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR TCA 90 bp CCTTGCTTGAATCTTTTAGCGAGCTATTCAGAGATTCTATATCCCCATTTACTCAATGCTACTGGCCTATaGCTCAGTTTGGCGCCAGAG +
Preference number: 2 (lower is better)
Translates to: PCLNLLASYSEILYPHLLNATGL*LSLAPE
Trigger: CTCTGGCGCCAAACTGAGTCATAGGCCAGTAGCATT...GAGTAAATGGGGATATAGAATCTCTGAATAGCTCGCTAAAAGATTCAAGCAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR TCA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACAATGCTACTGGCCTATaGCTCAGTTTGGCGCCAGAG +
Preference number: 2 (lower is better)
Translates to: RSVQKEMMDNISASTMSYNATGL*LSLAPE
Trigger: CTCTGGCGCCAAACTGAGTCATAGGCCAGTAGCATT...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR GCA 90 bp CAAAGGGACTTGGCACACGTCATTAAGTTAAGGATCTTGAGATGGAGAGATTGTCACCCTCAAATAAAGTaGACAGTCCATGGCAGACCA +
Preference number: 2 (lower is better)
Translates to: QRDLAHVIKLRILRWRDCHPQIK*TVHGRP
Trigger: TGGTCTGCCATGGACTGTGCACTTTATTTGAGGGTG...ACAATCTCTCCATCTCAAGATCCTTAACTTAATGACGTGTGCCAAGTCCCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR TCA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGAATGCTACTGGCCTATaGCTCAGTTTGGCGCCAGAG +
Preference number: 2 (lower is better)
Translates to: IYRSVQKEMMDNISASTMNATGL*LSLAPE
Trigger: CTCTGGCGCCAAACTGAGTCATAGGCCAGTAGCATT...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR TCA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTAATGCTACTGGCCTATaGCTCAGTTTGGCGCCAGAG +
Preference number: 2 (lower is better)
Translates to: MDNISASTMSYSNFLIFFNATGL*LSLAPE
Trigger: CTCTGGCGCCAAACTGAGTCATAGGCCAGTAGCATT...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR TCA 90 bp GAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAGATCCGCCCATGATTTaGGAAAAATGTTCTGCACTG +
Preference number: 2 (lower is better)
Translates to: EAGRKFDYSRRVCDHGSRDPPMI*EKCSAL
Trigger: CAGTGCAGAACATTTTTCTCAAATCATGGGCGGATC...TCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR GCA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGCACCCTCAAATAAAGTaGACAGTCCATGGCAGACCA +
Preference number: 2 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKHPQIK*TVHGRP
Trigger: TGGTCTGCCATGGACTGTGCACTTTATTTGAGGGTG...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR CCA 90 bp CAAAGGGACTTGGCACACGTCATTAAGTTAAGGATCTTGAGATGGAGAGATTGTTCTAAGTGCTGTAGATaGCCACATAAGCATAGTGGG +
Preference number: 2 (lower is better)
Translates to: QRDLAHVIKLRILRWRDCSKCCR*PHKHSG
Trigger: CCCACTATGCTTATGTGGCCATCTACAGCACTTAGA...ACAATCTCTCCATCTCAAGATCCTTAACTTAATGACGTGTGCCAAGTCCCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR CCA 90 bp CAAAGGGACTTGGCACACGTCATTAAGTTAAGGATCTTGAGATGGAGAGATTGTGTGATAACGTTAGCATaGCCCAATTCTTCCTCACTG +
Preference number: 2 (lower is better)
Translates to: QRDLAHVIKLRILRWRDCVITLA*PNSSSL
Trigger: CAGTGAGGAAGAATTGGGCCATGCTAACGTTATCAC...ACAATCTCTCCATCTCAAGATCCTTAACTTAATGACGTGTGCCAAGTCCCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR TCA 90 bp CCTTGCTTGAATCTTTTAGCGAGCTATTCAGAGATTCTATATCCCCATTTACTCGCAGAGACTCATAAATaGCAGGGGAAAATGCCCAAG +
Preference number: 2 (lower is better)
Translates to: PCLNLLASYSEILYPHLLAETHK*QGKMPK
Trigger: CTTGGGCATTTTCCCCTGTCATTTATGAGTCTCTGC...GAGTAAATGGGGATATAGAATCTCTGAATAGCTCGCTAAAAGATTCAAGCAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR TCA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACGCAGAGACTCATAAATaGCAGGGGAAAATGCCCAAG +
Preference number: 2 (lower is better)
Translates to: RSVQKEMMDNISASTMSYAETHK*QGKMPK
Trigger: CTTGGGCATTTTCCCCTGTCATTTATGAGTCTCTGC...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR TCA 90 bp CAAAGGGACTTGGCACACGTCATTAAGTTAAGGATCTTGAGATGGAGAGATTGTCTCCACTTAGAGAAATaGGCTGTGATCTGTGTAGTT +
Preference number: 2 (lower is better)
Translates to: QRDLAHVIKLRILRWRDCLHLEK*AVICVV
Trigger: AACTACACAGATCACAGCTCATTTCTCTAAGTGGAG...ACAATCTCTCCATCTCAAGATCCTTAACTTAATGACGTGTGCCAAGTCCCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR TCA 90 bp GAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGATCCAAGATCCGCCCATaGTTTGAGAAAAATGTTCTG +
Preference number: 2 (lower is better)
Translates to: EAGRKFDYSRRVCDHGSRSKIRP*FEKNVL
Trigger: CAGAACATTTTTCTCAAATCATGGGCGGATCTTGGA...TCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR GCA 90 bp CCTTGCTTGAATCTTTTAGCGAGCTATTCAGAGATTCTATATCCCCATTTACTCCACCCTCAAATAAAGTaGACAGTCCATGGCAGACCA +
Preference number: 2 (lower is better)
Translates to: PCLNLLASYSEILYPHLLHPQIK*TVHGRP
Trigger: TGGTCTGCCATGGACTGTGCACTTTATTTGAGGGTG...GAGTAAATGGGGATATAGAATCTCTGAATAGCTCGCTAAAAGATTCAAGCAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR GCA 90 bp GAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGACAGAGTCCAAAATTGTaGCCCTCATTTACAGTCATG +
Preference number: 2 (lower is better)
Translates to: EAGRKFDYSRRVCDHGSRQSPKL*PSFTVM
Trigger: CATGACTGTAAATGAGGGGCACAATTTTGGACTCTG...TCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR TCA 90 bp TATAAGAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAGACTCATAAATaGCAGGGGAAAATGCCCAAG +
Preference number: 2 (lower is better)
Translates to: YKRQEGNLTIVEEYVTMEAETHK*QGKMPK
Trigger: CTTGGGCATTTTCCCCTGTCATTTATGAGTCTCTGC...TTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTCTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR TCA 90 bp GAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGACCAATTCTTCCTCACTaGCTGACTAAAACTAGACTA +
Preference number: 2 (lower is better)
Translates to: EAGRKFDYSRRVCDHGSRPILPH*LTKTRL
Trigger: TAGTCTAGTTTTAGTCAGTCAGTGAGGAAGAATTGG...TCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR GCA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACAATGACAGGGGAAAATaGCCAAGGCAAATAGTCTCC +
Preference number: 2 (lower is better)
Translates to: RSVQKEMMDNISASTMSYNDRGK*PRQIVS
Trigger: GGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATT...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
3UTR CAA 90 bp AAAGGTTCCACAGTTTCCTTTAGCAAGCTGAAGCTTACTCTTCATTaGTCAATGTGCATAAAAGCTGCTTATAGCATAGCATGGCGTAAG +
Preference number: 2 (lower is better)
Translates to: KGSTVSFSKLKLTLH*SMCIKAAYSIAWRK
Trigger: CTTACGCCATGCTATGCTATAAGCAGCTTTTATGCACATTGACAAATGAAGAGTAAGCTTCAGCTTGCTAAAGGAAACTGTGGAACCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR TCA 90 bp TTGAGTCATCTATTTTGTCCTGAAATGCTATCTGTAGTTAACTGCACTGCTTATGCAGAGACTCATAAATaGCAGGGGAAAATGCCCAAG +
Preference number: 2 (lower is better)
Translates to: LSHLFCPEMLSVVNCTAYAETHK*QGKMPK
Trigger: CTTGGGCATTTTCCCCTGTCATTTATGAGTCTCTGC...ATAAGCAGTGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR TCA 90 bp GAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGACATTTACAGTCATGGTaGTTATTCAACTTCAGAGAG +
Preference number: 2 (lower is better)
Translates to: EAGRKFDYSRRVCDHGSRHLQSW*LFNFRE
Trigger: CTCTCTGAAGTTGAATAATCACCATGACTGTAAATG...TCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR TCA 90 bp CAAAGGGACTTGGCACACGTCATTAAGTTAAGGATCTTGAGATGGAGAGATTGTCATTTACAGTCATGGTaGTTATTCAACTTCAGAGAG +
Preference number: 2 (lower is better)
Translates to: QRDLAHVIKLRILRWRDCHLQSW*LFNFRE
Trigger: CTCTCTGAAGTTGAATAATCACCATGACTGTAAATG...ACAATCTCTCCATCTCAAGATCCTTAACTTAATGACGTGTGCCAAGTCCCTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR GCA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTCACCCTCAAATAAAGTaGACAGTCCATGGCAGACCA +
Preference number: 2 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISHPQIK*TVHGRP
Trigger: TGGTCTGCCATGGACTGTGCACTTTATTTGAGGGTG...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR GCA 90 bp TTGAGTCATCTATTTTGTCCTGAAATGCTATCTGTAGTTAACTGCACTGCTTATCACCCTCAAATAAAGTaGACAGTCCATGGCAGACCA +
Preference number: 2 (lower is better)
Translates to: LSHLFCPEMLSVVNCTAYHPQIK*TVHGRP
Trigger: TGGTCTGCCATGGACTGTGCACTTTATTTGAGGGTG...ATAAGCAGTGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR GCA 90 bp GAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAGATTGAAAATGACAGGGGAAAATaGCCAAGGCAAATAGTCTCC +
Preference number: 2 (lower is better)
Translates to: EGNLTIVEEYVTMEAEIENDRGK*PRQIVS
Trigger: GGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATT...TTCAATCTCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR GCA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACCAGAGTCCAAAATTGTaGCCCTCATTTACAGTCATG +
Preference number: 2 (lower is better)
Translates to: RSVQKEMMDNISASTMSYQSPKL*PSFTVM
Trigger: CATGACTGTAAATGAGGGGCACAATTTTGGACTCTG...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR GCA 90 bp CAAAGGGACTTGGCACACGTCATTAAGTTAAGGATCTTGAGATGGAGAGATTGTAAAATTCATGTCCCTTaGTTGAATCTTTTAGCGAGC +
Preference number: 2 (lower is better)
Translates to: QRDLAHVIKLRILRWRDCKIHVP*LNLLAS
Trigger: GCTCGCTAAAAGATTCAAGCAAGGGACATGAATTTT...ACAATCTCTCCATCTCAAGATCCTTAACTTAATGACGTGTGCCAAGTCCCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR GCA 90 bp CAAAGGGACTTGGCACACGTCATTAAGTTAAGGATCTTGAGATGGAGAGATTGTAAAACACAAGAATCTTaGAGAAATCAGCTGCCAGAT +
Preference number: 2 (lower is better)
Translates to: QRDLAHVIKLRILRWRDCKTQES*RNQLPD
Trigger: ATCTGGCAGCTGATTTCTGCAAGATTCTTGTGTTTT...ACAATCTCTCCATCTCAAGATCCTTAACTTAATGACGTGTGCCAAGTCCCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR CCA 90 bp GAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAGATTGAATCTAAGTGCTGTAGATaGCCACATAAGCATAGTGGG +
Preference number: 2 (lower is better)
Translates to: EGNLTIVEEYVTMEAEIESKCCR*PHKHSG
Trigger: CCCACTATGCTTATGTGGCCATCTACAGCACTTAGA...TTCAATCTCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR TCA 90 bp GAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAGATTGAACTCCACTTAGAGAAATaGGCTGTGATCTGTGTAGTT +
Preference number: 2 (lower is better)
Translates to: EGNLTIVEEYVTMEAEIELHLEK*AVICVV
Trigger: AACTACACAGATCACAGCTCATTTCTCTAAGTGGAG...TTCAATCTCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR GCA 90 bp TTGAGTCATCTATTTTGTCCTGAAATGCTATCTGTAGTTAACTGCACTGCTTATAATGACAGGGGAAAATaGCCAAGGCAAATAGTCTCC +
Preference number: 2 (lower is better)
Translates to: LSHLFCPEMLSVVNCTAYNDRGK*PRQIVS
Trigger: GGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATT...ATAAGCAGTGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR GCA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTAATGACAGGGGAAAATaGCCAAGGCAAATAGTCTCC +
Preference number: 2 (lower is better)
Translates to: VMVIIQLQRELPILWLSSNDRGK*PRQIVS
Trigger: GGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATT...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR GCA 90 bp GAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAGATTGAACAGAGTCCAAAATTGTaGCCCTCATTTACAGTCATG +
Preference number: 2 (lower is better)
Translates to: EGNLTIVEEYVTMEAEIEQSPKL*PSFTVM
Trigger: CATGACTGTAAATGAGGGGCACAATTTTGGACTCTG...TTCAATCTCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR GCA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTCAGAGTCCAAAATTGTaGCCCTCATTTACAGTCATG +
Preference number: 2 (lower is better)
Translates to: MDNISASTMSYSNFLIFFQSPKL*PSFTVM
Trigger: CATGACTGTAAATGAGGGGCACAATTTTGGACTCTG...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR GCA 90 bp GAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGACTATCTGTAGTTAACTaGACTGCTTATAAATGGTCA +
Preference number: 2 (lower is better)
Translates to: EAGRKFDYSRRVCDHGSRLSVVN*TAYKWS
Trigger: TGACCATTTATAAGCAGTGCAGTTAACTACAGATAG...TCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR GCA 90 bp CAAAGGGACTTGGCACACGTCATTAAGTTAAGGATCTTGAGATGGAGAGATTGTTGTTTTTATTCTAAGTaGTGTAGATGGCCACATAAG +
Preference number: 2 (lower is better)
Translates to: QRDLAHVIKLRILRWRDCCFYSK*CRWPHK
Trigger: CTTATGTGGCCATCTACAGCACTTAGAATAAAAACA...ACAATCTCTCCATCTCAAGATCCTTAACTTAATGACGTGTGCCAAGTCCCTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR CCA 90 bp GAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGACAAATAGTCTCCAAGTaGATATTTACACAACGTGAA +
Preference number: 2 (lower is better)
Translates to: EAGRKFDYSRRVCDHGSRQIVSK*IFTQRE
Trigger: TTCACGTTGTGTAAATATCCACTTGGAGACTATTTG...TCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR CCA 90 bp CAAAGGGACTTGGCACACGTCATTAAGTTAAGGATCTTGAGATGGAGAGATTGTCAAATAGTCTCCAAGTaGATATTTACACAACGTGAA +
Preference number: 2 (lower is better)
Translates to: QRDLAHVIKLRILRWRDCQIVSK*IFTQRE
Trigger: TTCACGTTGTGTAAATATCCACTTGGAGACTATTTG...ACAATCTCTCCATCTCAAGATCCTTAACTTAATGACGTGTGCCAAGTCCCTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR CCA 90 bp GAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAGAATTACCCATTTTATaGTTATCCTCTGCAAGTCAT +
Preference number: 2 (lower is better)
Translates to: EAGRKFDYSRRVCDHGSRELPIL*LSSASH
Trigger: ATGACTTGCAGAGGATAACCATAAAATGGGTAATTC...TCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR CCA 90 bp CAAAGGGACTTGGCACACGTCATTAAGTTAAGGATCTTGAGATGGAGAGATTGTGAATTACCCATTTTATaGTTATCCTCTGCAAGTCAT +
Preference number: 2 (lower is better)
Translates to: QRDLAHVIKLRILRWRDCELPIL*LSSASH
Trigger: ATGACTTGCAGAGGATAACCATAAAATGGGTAATTC...ACAATCTCTCCATCTCAAGATCCTTAACTTAATGACGTGTGCCAAGTCCCTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR TCA 90 bp TATAAGAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGTGTCCAAAAAGAGATaGTGGATAATATCAGTGCCA +
Preference number: 2 (lower is better)
Translates to: YKRQEGNLTIVEEYVTMEVSKKR*WIISVP
Trigger: TGGCACTGATATTATCCATCATCTCTTTTTGGACAC...TTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTCTTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR TCA 90 bp TATAAGAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAACCAATTCTTCCTCACTaGCTGACTAAAACTAGACTA +
Preference number: 2 (lower is better)
Translates to: YKRQEGNLTIVEEYVTMEPILPH*LTKTRL
Trigger: TAGTCTAGTTTTAGTCAGTCAGTGAGGAAGAATTGG...TTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTCTTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR TCA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTCATTTACAGTCATGGTaGTTATTCAACTTCAGAGAG +
Preference number: 2 (lower is better)
Translates to: MDNISASTMSYSNFLIFFHLQSW*LFNFRE
Trigger: CTCTCTGAAGTTGAATAATCACCATGACTGTAAATG...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR TCA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGCATTTACAGTCATGGTaGTTATTCAACTTCAGAGAG +
Preference number: 2 (lower is better)
Translates to: IYRSVQKEMMDNISASTMHLQSW*LFNFRE
Trigger: CTCTCTGAAGTTGAATAATCACCATGACTGTAAATG...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR GCA 90 bp CCTTGCTTGAATCTTTTAGCGAGCTATTCAGAGATTCTATATCCCCATTTACTCCTATCTGTAGTTAACTaGACTGCTTATAAATGGTCA +
Preference number: 2 (lower is better)
Translates to: PCLNLLASYSEILYPHLLLSVVN*TAYKWS
Trigger: TGACCATTTATAAGCAGTGCAGTTAACTACAGATAG...GAGTAAATGGGGATATAGAATCTCTGAATAGCTCGCTAAAAGATTCAAGCAAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR GCA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACCTATCTGTAGTTAACTaGACTGCTTATAAATGGTCA +
Preference number: 2 (lower is better)
Translates to: RSVQKEMMDNISASTMSYLSVVN*TAYKWS
Trigger: TGACCATTTATAAGCAGTGCAGTTAACTACAGATAG...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR CCA 90 bp CCTTGCTTGAATCTTTTAGCGAGCTATTCAGAGATTCTATATCCCCATTTACTCCAAATAGTCTCCAAGTaGATATTTACACAACGTGAA +
Preference number: 2 (lower is better)
Translates to: PCLNLLASYSEILYPHLLQIVSK*IFTQRE
Trigger: TTCACGTTGTGTAAATATCCACTTGGAGACTATTTG...GAGTAAATGGGGATATAGAATCTCTGAATAGCTCGCTAAAAGATTCAAGCAAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR CCA 90 bp CCTTGCTTGAATCTTTTAGCGAGCTATTCAGAGATTCTATATCCCCATTTACTCGAATTACCCATTTTATaGTTATCCTCTGCAAGTCAT +
Preference number: 2 (lower is better)
Translates to: PCLNLLASYSEILYPHLLELPIL*LSSASH
Trigger: ATGACTTGCAGAGGATAACCATAAAATGGGTAATTC...GAGTAAATGGGGATATAGAATCTCTGAATAGCTCGCTAAAAGATTCAAGCAAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR GCA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGCTATCTGTAGTTAACTaGACTGCTTATAAATGGTCA +
Preference number: 2 (lower is better)
Translates to: IYRSVQKEMMDNISASTMLSVVN*TAYKWS
Trigger: TGACCATTTATAAGCAGTGCAGTTAACTACAGATAG...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR GCA 90 bp GAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAGATTGAACTATCTGTAGTTAACTaGACTGCTTATAAATGGTCA +
Preference number: 2 (lower is better)
Translates to: EGNLTIVEEYVTMEAEIELSVVN*TAYKWS
Trigger: TGACCATTTATAAGCAGTGCAGTTAACTACAGATAG...TTCAATCTCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR GCA 90 bp GAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAGATTGAATGTTTTTATTCTAAGTaGTGTAGATGGCCACATAAG +
Preference number: 2 (lower is better)
Translates to: EGNLTIVEEYVTMEAEIECFYSK*CRWPHK
Trigger: CTTATGTGGCCATCTACAGCACTTAGAATAAAAACA...TTCAATCTCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR CCA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTCAAATAGTCTCCAAGTaGATATTTACACAACGTGAA +
Preference number: 2 (lower is better)
Translates to: MDNISASTMSYSNFLIFFQIVSK*IFTQRE
Trigger: TTCACGTTGTGTAAATATCCACTTGGAGACTATTTG...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR CCA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGGAATTACCCATTTTATaGTTATCCTCTGCAAGTCAT +
Preference number: 2 (lower is better)
Translates to: IYRSVQKEMMDNISASTMELPIL*LSSASH
Trigger: ATGACTTGCAGAGGATAACCATAAAATGGGTAATTC...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR CCA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTCAAATAGTCTCCAAGTaGATATTTACACAACGTGAA +
Preference number: 2 (lower is better)
Translates to: VMVIIQLQRELPILWLSSQIVSK*IFTQRE
Trigger: TTCACGTTGTGTAAATATCCACTTGGAGACTATTTG...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
3UTR TCA 72 bp CTTTGCTACACAGTCTTCCTCCTCCGTGCGGTGTTCTaGATAACAGCCCTGCCCTCACCCCTTACATCCATG +
Preference number: 3 (lower is better)
Translates to: LCYTVFLLRAVF*ITALPSPLTSM
Trigger: CATGGATGTAAGGGGTGAGGGCAGGGCTGTTATTCAGAACACCGCACGGAGGAGGAAGACTGTGTAGCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
3UTR TCA 72 bp AAGGTGGCACCAGATACACGTAATGCTACTGGCCTATaGCTCAGTTTGGCGCCAGAGTCCAAAATTGTGCCC +
Preference number: 3 (lower is better)
Translates to: KVAPDTRNATGL*LSLAPESKIVP
Trigger: GGGCACAATTTTGGACTCTGGCGCCAAACTGAGTCATAGGCCAGTAGCATTACGTGTATCTGGTGCCACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR CAA 90 bp GGTTGCAGCAGCCCCCTTCCGGCATGTAGGCCATGCTCTCATCAAAGTGAGAAACTCTCCAGCCACCTTTaGCATAATTCCTTTCTCATA +
Preference number: 3 (lower is better)
Translates to: GCSSPLPACRPCSHQSEKLSSHL*HNSFLI
Trigger: TATGAGAAAGGAATTATGCAAAAGGTGGCTGGAGAG...TTTCTCACTTTGATGAGAGCATGGCCTACATGCCGGAAGGGGGCTGCTGCAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443137.5
3UTR-3UTR CAA 90 bp GAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGACGCCAGAGTCCAAAATaGTGCCCCTCATTTACAGTC +
Preference number: 3 (lower is better)
Translates to: EAGRKFDYSRRVCDHGSRRQSPK*CPSFTV
Trigger: GACTGTAAATGAGGGGCACAATTTTGGACTCTGGCG...TCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
3UTR TCA 72 bp TACGGGAAACTAGACCTCCAAGATCCGCCCATGATTTaGGAAAAATGTTCTGCACTGTCAGTCTTGTGGATT +
Preference number: 3 (lower is better)
Translates to: YGKLDLQDPPMI*EKCSALSVLWI
Trigger: AATCCACAAGACTGACAGTGCAGAACATTTTTCTCAAATCATGGGCGGATCTTGGAGGTCTAGTTTCCCGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR CAA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTCGCCAGAGTCCAAAATaGTGCCCCTCATTTACAGTC +
Preference number: 3 (lower is better)
Translates to: MDNISASTMSYSNFLIFFRQSPK*CPSFTV
Trigger: GACTGTAAATGAGGGGCACAATTTTGGACTCTGGCG...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR CAA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGCGCCAGAGTCCAAAATaGTGCCCCTCATTTACAGTC +
Preference number: 3 (lower is better)
Translates to: IYRSVQKEMMDNISASTMRQSPK*CPSFTV
Trigger: GACTGTAAATGAGGGGCACAATTTTGGACTCTGGCG...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR CAA 90 bp GAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGATGGTGTTTGGGTTTCTaGATAACTGCTCCACTTAGA +
Preference number: 3 (lower is better)
Translates to: EAGRKFDYSRRVCDHGSRWCLGF*ITAPLR
Trigger: TCTAAGTGGAGCAGTTATCAAGAAACCCAAACACCA...TCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR CAA 90 bp CAAAGGGACTTGGCACACGTCATTAAGTTAAGGATCTTGAGATGGAGAGATTGTTGGTGTTTGGGTTTCTaGATAACTGCTCCACTTAGA +
Preference number: 3 (lower is better)
Translates to: QRDLAHVIKLRILRWRDCWCLGF*ITAPLR
Trigger: TCTAAGTGGAGCAGTTATCAAGAAACCCAAACACCA...ACAATCTCTCCATCTCAAGATCCTTAACTTAATGACGTGTGCCAAGTCCCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
3UTR TCA 72 bp CAAATCCTAGATCCCTCAGCAGAACTCCACTGTTCCTaGGTAAATCAATTAGAGTCTTTGCTACACAGTCTT +
Preference number: 3 (lower is better)
Translates to: QILDPSAELHCS*VNQLESLLHSL
Trigger: AAGACTGTGTAGCAAAGACTCTAATTGATTTACTCAGGAACAGTGGAGTTCTGCTGAGGGATCTAGGATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR CAA 90 bp GAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAATTCATGTCCCTTGCTaGAATCTTTTAGCGAGCTAT +
Preference number: 3 (lower is better)
Translates to: EAGRKFDYSRRVCDHGSRIHVPC*NLLASY
Trigger: ATAGCTCGCTAAAAGATTCAAGCAAGGGACATGAAT...TCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR CAA 90 bp CAAAGGGACTTGGCACACGTCATTAAGTTAAGGATCTTGAGATGGAGAGATTGTATTCATGTCCCTTGCTaGAATCTTTTAGCGAGCTAT +
Preference number: 3 (lower is better)
Translates to: QRDLAHVIKLRILRWRDCIHVPC*NLLASY
Trigger: ATAGCTCGCTAAAAGATTCAAGCAAGGGACATGAAT...ACAATCTCTCCATCTCAAGATCCTTAACTTAATGACGTGTGCCAAGTCCCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR CAA 90 bp GAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGACAAAATTCATGTCCCTaGCTTGAATCTTTTAGCGAG +
Preference number: 3 (lower is better)
Translates to: EAGRKFDYSRRVCDHGSRQNSCP*LESFSE
Trigger: CTCGCTAAAAGATTCAAGCAAGGGACATGAATTTTG...TCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR CAA 90 bp GAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGATCTGCACTGTCAGTCTaGTGGATTTTTATTCTGAAG +
Preference number: 3 (lower is better)
Translates to: EAGRKFDYSRRVCDHGSRSALSV*WIFILK
Trigger: CTTCAGAATAAAAATCCACAAGACTGACAGTGCAGA...TCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR CAA 90 bp CAAAGGGACTTGGCACACGTCATTAAGTTAAGGATCTTGAGATGGAGAGATTGTTCTGCACTGTCAGTCTaGTGGATTTTTATTCTGAAG +
Preference number: 3 (lower is better)
Translates to: QRDLAHVIKLRILRWRDCSALSV*WIFILK
Trigger: CTTCAGAATAAAAATCCACAAGACTGACAGTGCAGA...ACAATCTCTCCATCTCAAGATCCTTAACTTAATGACGTGTGCCAAGTCCCTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR CAA 90 bp CAAAGGGACTTGGCACACGTCATTAAGTTAAGGATCTTGAGATGGAGAGATTGTATACCATTTCTGCCATaGTTCTCTTGTGATAACGTT +
Preference number: 3 (lower is better)
Translates to: QRDLAHVIKLRILRWRDCIPFLP*FSCDNV
Trigger: AACGTTATCACAAGAGAACAATGGCAGAAATGGTAT...ACAATCTCTCCATCTCAAGATCCTTAACTTAATGACGTGTGCCAAGTCCCTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR CAA 90 bp GAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAGATTGAAAGATCCGCCCATGATTaGAGAAAAATGTTCTGCACT +
Preference number: 3 (lower is better)
Translates to: EGNLTIVEEYVTMEAEIERSAHD*RKMFCT
Trigger: AGTGCAGAACATTTTTCTCAAATCATGGGCGGATCT...TTCAATCTCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR CAA 90 bp GAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAGATTGAAATTCATGTCCCTTGCTaGAATCTTTTAGCGAGCTAT +
Preference number: 3 (lower is better)
Translates to: EGNLTIVEEYVTMEAEIEIHVPC*NLLASY
Trigger: ATAGCTCGCTAAAAGATTCAAGCAAGGGACATGAAT...TTCAATCTCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR CAA 90 bp GAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAGATTGAAAAAAGACGGTATGATTaGTATCTAAACAGCAAGGTG +
Preference number: 3 (lower is better)
Translates to: EGNLTIVEEYVTMEAEIEKRRYD*YLNSKV
Trigger: CACCTTGCTGTTTAGATACAAATCATACCGTCTTTT...TTCAATCTCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTC
37% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR CAA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTAAAAGACGGTATGATTaGTATCTAAACAGCAAGGTG +
Preference number: 3 (lower is better)
Translates to: MDNISASTMSYSNFLIFFKRRYD*YLNSKV
Trigger: CACCTTGCTGTTTAGATACAAATCATACCGTCTTTT...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
3UTR-3UTR CAA 90 bp TATAAGAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAATACCATTTCTGCCATaGTTCTCTTGTGATAACGTT +
Preference number: 3 (lower is better)
Translates to: YKRQEGNLTIVEEYVTMEIPFLP*FSCDNV
Trigger: AACGTTATCACAAGAGAACAATGGCAGAAATGGTAT...TTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTCTTATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
3UTR TCA 72 bp AATCCAATCACATTTACAGAAGTGTCCAAAAAGAGATaGTGGATAATATCAGTGCCAGCACTATGTCATACA +
Preference number: 3 (lower is better)
Translates to: NPITFTEVSKKR*WIISVPALCHT
Trigger: TGTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAATGTGATTGGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp GTGGGGGTTGCAGCAGCCCCCTTCCGGCATGTAGGCCATGCTCTCATCAAAGTGGTTGGGGGCGAGCGGTaGGATGGCTCGGGTTTCAAG +
Preference number: 4 (lower is better)
Translates to: VGVAAAPFRHVGHALIKVVGGER*DGSGFK
Trigger: CTTGAAACCCGAGCCATCTCACCGCTCGCCCCCAAC...CACTTTGATGAGAGCATGGCCTACATGCCGGAAGGGGGCTGCTGCAACCCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR CCA 90 bp GTGGGGGTTGCAGCAGCCCCCTTCCGGCATGTAGGCCATGCTCTCATCAAAGTGGGAGGGGGAAAGCTTTaGCTGGCCGCACTGCCAACC +
Preference number: 4 (lower is better)
Translates to: VGVAAAPFRHVGHALIKVGGGKL*LAALPT
Trigger: GGTTGGCAGTGCGGCCAGCCAAAGCTTTCCCCCTCC...CACTTTGATGAGAGCATGGCCTACATGCCGGAAGGGGGCTGCTGCAACCCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR CCA 90 bp CCCTTCCGGCATGTAGGCCATGCTCTCATCAAAGTGAGAAAGAGGCACTGTGTCGCCAGAGCCCAGGGTTaGGGGCGAGCGGTGAGATGG +
Preference number: 4 (lower is better)
Translates to: PFRHVGHALIKVRKRHCVARAQG*GRAVRW
Trigger: CCATCTCACCGCTCGCCCCCAACCCTGGGCTCTGGC...GACACAGTGCCTCTTTCTCACTTTGATGAGAGCATGGCCTACATGCCGGAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR TCA 90 bp GTGGGGGTTGCAGCAGCCCCCTTCCGGCATGTAGGCCATGCTCTCATCAAAGTGCTGCCAGAGCTGAAGTaGTCCTCGCCGTTGGTATGT +
Preference number: 4 (lower is better)
Translates to: VGVAAAPFRHVGHALIKVLPELK*SSPLVC
Trigger: ACATACCAACGGCGAGGATCACTTCAGCTCTGGCAG...CACTTTGATGAGAGCATGGCCTACATGCCGGAAGGGGGCTGCTGCAACCCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR GCA 90 bp GTGGGGGTTGCAGCAGCCCCCTTCCGGCATGTAGGCCATGCTCTCATCAAAGTGGGTCCATGGGGTAGCTaGTATCTGGTATGGACTGCG +
Preference number: 4 (lower is better)
Translates to: VGVAAAPFRHVGHALIKVGPWGS*YLVWTA
Trigger: CGCAGTCCATACCAGATAGCAGCTACCCCATGGACC...CACTTTGATGAGAGCATGGCCTACATGCCGGAAGGGGGCTGCTGCAACCCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR CCA 90 bp CATAGCTGGCCTGTTTTTCTGAATGCCCCAACGTCGGGCCACCTCTTCAGGCTCTGGAGGGAGGTGAGCTaGGAAGGCCCGGTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: HSWPVFLNAPTSGHLFRLWREVS*EGPVRF
Trigger: AAACCTGACCGGGCCTTCCCAGCTCACCTCCCTCCA...GAGCCTGAAGAGGTGGCCCGACGTTGGGGCATTCAGAAAAACAGGCCAGCTATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR CCA 90 bp GTGGGGGTTGCAGCAGCCCCCTTCCGGCATGTAGGCCATGCTCTCATCAAAGTGGGGGTAGCTGCTATCTaGTATGGACTGCGATGGAGG +
Preference number: 4 (lower is better)
Translates to: VGVAAAPFRHVGHALIKVGVAAI*YGLRWR
Trigger: CCTCCATCGCAGTCCATACCAGATAGCAGCTACCCC...CACTTTGATGAGAGCATGGCCTACATGCCGGAAGGGGGCTGCTGCAACCCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR CCA 90 bp GTGGGGGTTGCAGCAGCCCCCTTCCGGCATGTAGGCCATGCTCTCATCAAAGTGCAGGGTTCAGAAAGCTaGCGGCGAAATCTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: VGVAAAPFRHVGHALIKVQGSES*RRNLWS
Trigger: GGACCACAGATTTCGCCGCCAGCTTTCTGAACCCTG...CACTTTGATGAGAGCATGGCCTACATGCCGGAAGGGGGCTGCTGCAACCCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR CCA 90 bp CATAGCTGGCCTGTTTTTCTGAATGCCCCAACGTCGGGCCACCTCTTCAGGCTCGGGGAAAGCTTTGGCTaGCCGCACTGCCAACCATGG +
Preference number: 4 (lower is better)
Translates to: HSWPVFLNAPTSGHLFRLGESFG*PHCQPW
Trigger: CCATGGTTGGCAGTGCGGCCAGCCAAAGCTTTCCCC...GAGCCTGAAGAGGTGGCCCGACGTTGGGGCATTCAGAAAAACAGGCCAGCTATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR GCA 90 bp CCCTTCCGGCATGTAGGCCATGCTCTCATCAAAGTGAGAAAGAGGCACTGTGTCCTCTCGATGTTTCCCTaGGCGGTCGGTGTACCCCGG +
Preference number: 4 (lower is better)
Translates to: PFRHVGHALIKVRKRHCVLSMFP*AVGVPR
Trigger: CCGGGGTACACCGACCGCGCAGGGAAACATCGAGAG...GACACAGTGCCTCTTTCTCACTTTGATGAGAGCATGGCCTACATGCCGGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR CCA 90 bp TGGCCTGTTTTTCTGAATGCCCCAACGTCGGGCCACCTCTTCAGGCTCAATCAGATGCAGTGGGGACACTaGCGTGCTGGATGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: WPVFLNAPTSGHLFRLNQMQWGH*RAGWCG
Trigger: CCCACACCATCCAGCACGCCAGTGTCCCCACTGCAT...CTGATTGAGCCTGAAGAGGTGGCCCGACGTTGGGGCATTCAGAAAAACAGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR CCA 90 bp CATAGCTGGCCTGTTTTTCTGAATGCCCCAACGTCGGGCCACCTCTTCAGGCTCTGGTATGGACTGCGATaGAGGGAGGTGAGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: HSWPVFLNAPTSGHLFRLWYGLR*REVSWE
Trigger: TTCCCAGCTCACCTCCCTCCATCGCAGTCCATACCA...GAGCCTGAAGAGGTGGCCCGACGTTGGGGCATTCAGAAAAACAGGCCAGCTATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR CCA 90 bp GGTTGCAGCAGCCCCCTTCCGGCATGTAGGCCATGCTCTCATCAAAGTGAGAAAAGGACGTCCTTCCCTTaGCATCGTCGGCAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: GCSSPLPACRPCSHQSEKRTSFP*HRRQRR
Trigger: CCTCCTTTGCCGACGATGCCAAGGGAAGGACGTCCT...TTTCTCACTTTGATGAGAGCATGGCCTACATGCCGGAAGGGGGCTGCTGCAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR CCA 90 bp GTGGGGGTTGCAGCAGCCCCCTTCCGGCATGTAGGCCATGCTCTCATCAAAGTGTCAGACATCTGGCGTTaGTACATAGGACGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: VGVAAAPFRHVGHALIKVSDIWR*YIGRPS
Trigger: GGAAGGACGTCCTATGTACCAACGCCAGATGTCTGA...CACTTTGATGAGAGCATGGCCTACATGCCGGAAGGGGGCTGCTGCAACCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR CCA 90 bp GTGGGGGTTGCAGCAGCCCCCTTCCGGCATGTAGGCCATGCTCTCATCAAAGTGCTGCTTAAAGCCTTGTaGTGGGAAGGGGATGTTTGG +
Preference number: 4 (lower is better)
Translates to: VGVAAAPFRHVGHALIKVLLKAL*WEGDVW
Trigger: CCAAACATCCCCTTCCCACCACAAGGCTTTAAGCAG...CACTTTGATGAGAGCATGGCCTACATGCCGGAAGGGGGCTGCTGCAACCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR GCA 90 bp CATAGCTGGCCTGTTTTTCTGAATGCCCCAACGTCGGGCCACCTCTTCAGGCTCTACAGCCTTCTGTTCTaGTGGGATGAGCCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: HSWPVFLNAPTSGHLFRLYSLLF*WDEPGS
Trigger: GCTTCCTGGCTCATCCCAGCAGAACAGAAGGCTGTA...GAGCCTGAAGAGGTGGCCCGACGTTGGGGCATTCAGAAAAACAGGCCAGCTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR CCA 90 bp CCCTTCCGGCATGTAGGCCATGCTCTCATCAAAGTGAGAAAGAGGCACTGTGTCGGGCGAGCGGTGAGATaGCTCGGGTTTCAAGGACAA +
Preference number: 4 (lower is better)
Translates to: PFRHVGHALIKVRKRHCVGRAVR*LGFQGQ
Trigger: TTGTCCTTGAAACCCGAGCCATCTCACCGCTCGCCC...GACACAGTGCCTCTTTCTCACTTTGATGAGAGCATGGCCTACATGCCGGAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR CCA 90 bp TGGCCTGTTTTTCTGAATGCCCCAACGTCGGGCCACCTCTTCAGGCTCAATCAGAGATGCATGATGCAGTaGGGACACTGGCGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: WPVFLNAPTSGHLFRLNQRCMMQ*GHWRAG
Trigger: TCCAGCACGCCAGTGTCCCCACTGCATCATGCATCT...CTGATTGAGCCTGAAGAGGTGGCCCGACGTTGGGGCATTCAGAAAAACAGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR CCA 90 bp TGGCCTGTTTTTCTGAATGCCCCAACGTCGGGCCACCTCTTCAGGCTCAATCAGAGTGATCCTCGCCGTTaGTATGTGGGTCCTTCCCGA +
Preference number: 4 (lower is better)
Translates to: WPVFLNAPTSGHLFRLNQSDPRR*YVGPSR
Trigger: TCGGGAAGGACCCACATACCAACGGCGAGGATCACT...CTGATTGAGCCTGAAGAGGTGGCCCGACGTTGGGGCATTCAGAAAAACAGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR TCA 90 bp CCCTTCCGGCATGTAGGCCATGCTCTCATCAAAGTGAGAAAGAGGCACTGTGTCTCTGTTCTGCTGGGATaGGCCAGGAAGCCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: PFRHVGHALIKVRKRHCVSVLLG*ARKPSC
Trigger: GCAAGAAGGCTTCCTGGCTCATCCCAGCAGAACAGA...GACACAGTGCCTCTTTCTCACTTTGATGAGAGCATGGCCTACATGCCGGAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR GCA 90 bp CCCTTCCGGCATGTAGGCCATGCTCTCATCAAAGTGAGAAAGAGGCACTGTGTCGGGTCGTGGTACTCCTaGTTAAAGCCTTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: PFRHVGHALIKVRKRHCVGSWYS*LKPCGG
Trigger: CCCACCACAAGGCTTTAAGCAGGAGTACCACGACCC...GACACAGTGCCTCTTTCTCACTTTGATGAGAGCATGGCCTACATGCCGGAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR CCA 90 bp GGTTGCAGCAGCCCCCTTCCGGCATGTAGGCCATGCTCTCATCAAAGTGAGAAAAGCTGCTATCTGGTATaGACTGCGATGGAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: GCSSPLPACRPCSHQSEKSCYLV*TAMEGG
Trigger: ACCTCCCTCCATCGCAGTCCATACCAGATAGCAGCT...TTTCTCACTTTGATGAGAGCATGGCCTACATGCCGGAAGGGGGCTGCTGCAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR TCA 90 bp CATAGCTGGCCTGTTTTTCTGAATGCCCCAACGTCGGGCCACCTCTTCAGGCTCTGTGGGGTTCTTTCTTaGTTTTCAGTGGCAGGCCAT +
Preference number: 4 (lower is better)
Translates to: HSWPVFLNAPTSGHLFRLCGVLS*FSVAGH
Trigger: ATGGCCTGCCACTGAAAATCAAGAAAGAACCCCACA...GAGCCTGAAGAGGTGGCCCGACGTTGGGGCATTCAGAAAAACAGGCCAGCTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR TCA 90 bp CCCTTCCGGCATGTAGGCCATGCTCTCATCAAAGTGAGAAAGAGGCACTGTGTCGGCAGAGCTGATTTCTaGACATGGACTGTGGGGTTC +
Preference number: 4 (lower is better)
Translates to: PFRHVGHALIKVRKRHCVGRADF*TWTVGF
Trigger: GAACCCCACAGTCCATGTTCAGAAATCAGCTCTGCC...GACACAGTGCCTCTTTCTCACTTTGATGAGAGCATGGCCTACATGCCGGAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR TCA 90 bp TGGCCTGTTTTTCTGAATGCCCCAACGTCGGGCCACCTCTTCAGGCTCAATCAGGACTGCAGGCAGAGCTaGTTTCTGAACATGGACTGT +
Preference number: 4 (lower is better)
Translates to: WPVFLNAPTSGHLFRLNQDCRQS*FLNMDC
Trigger: ACAGTCCATGTTCAGAAATCAGCTCTGCCTGCAGTC...CTGATTGAGCCTGAAGAGGTGGCCCGACGTTGGGGCATTCAGAAAAACAGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR TCA 90 bp TGGCCTGTTTTTCTGAATGCCCCAACGTCGGGCCACCTCTTCAGGCTCAATCAGTCCTCCTCGTTGATGTaGCGTTCCATGTCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: WPVFLNAPTSGHLFRLNQSSSLM*RSMSVF
Trigger: GAAGACAGACATGGAACGTCACATCAACGAGGAGGA...CTGATTGAGCCTGAAGAGGTGGCCCGACGTTGGGGCATTCAGAAAAACAGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR TCA 90 bp GGTTGCAGCAGCCCCCTTCCGGCATGTAGGCCATGCTCTCATCAAAGTGAGAAATTCAGTGGCAGGCCATaGAAAGCCAAACTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: GCSSPLPACRPCSHQSEKFSGRP*KAKLSA
Trigger: GGCTGAAAGTTTGGCTTTTCATGGCCTGCCACTGAA...TTTCTCACTTTGATGAGAGCATGGCCTACATGCCGGAAGGGGGCTGCTGCAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR TCA 90 bp ATAGTTCATAGCTGGCCTGTTTTTCTGAATGCCCCAACGTCGGGCCACCTCTTCTACCCCGGGCAGCTCTaGTTCGCAAACGTGTGCAAA +
Preference number: 4 (lower is better)
Translates to: IVHSWPVFLNAPTSGHLFYPGQL*FANVCK
Trigger: TTTGCACACGTTTGCGAATCAGAGCTGCCCGGGGTA...GAAGAGGTGGCCCGACGTTGGGGCATTCAGAAAAACAGGCCAGCTATGAACTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR GCA 90 bp ATAGTTCATAGCTGGCCTGTTTTTCTGAATGCCCCAACGTCGGGCCACCTCTTCGCCTGTTTTTCTGAATaGCCCAACGTCGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: IVHSWPVFLNAPTSGHLFACFSE*PNVGPP
Trigger: AGGTGGCCCGACGTTGGGGCATTCAGAAAAACAGGC...GAAGAGGTGGCCCGACGTTGGGGCATTCAGAAAAACAGGCCAGCTATGAACTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR GCA 90 bp CATAGCTGGCCTGTTTTTCTGAATGCCCCAACGTCGGGCCACCTCTTCAGGCTCAGCGCAAAAACGCCCTaGTTGACTGTCACTTGTGTT +
Preference number: 4 (lower is better)
Translates to: HSWPVFLNAPTSGHLFRLSAKTP*LTVTCV
Trigger: AACACAAGTGACAGTCAAGCAGGGCGTTTTTGCGCT...GAGCCTGAAGAGGTGGCCCGACGTTGGGGCATTCAGAAAAACAGGCCAGCTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR GCA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGCTCTGCCCTAGGGGGTaGTCGGCCGGTAGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKLCPRG*SAGRRW
Trigger: CCAGCGCCTACCGGCCGAGCACCCCCTAGGGCAGAG...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000405218.6
CDS-3UTR GCA 90 bp GGTTGCAGCAGCCCCCTTCCGGCATGTAGGCCATGCTCTCATCAAAGTGAGAAAGCGATCAACGAGACTTaGTTTGCACCTAACGGGATG +
Preference number: 4 (lower is better)
Translates to: GCSSPLPACRPCSHQSEKAINET*FAPNGM
Trigger: CATCCCGTTAGGTGCAAAGCAAGTCTCGTTGATCGC...TTTCTCACTTTGATGAGAGCATGGCCTACATGCCGGAAGGGGGCTGCTGCAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR CCA 90 bp GAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAGCCAGAGCCCAGGGTTaGGGGCGAGCGGTGAGATGG +
Preference number: 4 (lower is better)
Translates to: EAGRKFDYSRRVCDHGSRARAQG*GRAVRW
Trigger: CCATCTCACCGCTCGCCCCCAACCCTGGGCTCTGGC...TCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242066.9
CDS-3UTR CCA 90 bp TGGCCTGTTTTTCTGAATGCCCCAACGTCGGGCCACCTCTTCAGGCTCAATCAGCTTAAAGCCTTGTGGTaGGAAGGGGATGTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: WPVFLNAPTSGHLFRLNQLKALW*EGDVWL
Trigger: GAGCCAAACATCCCCTTCCCACCACAAGGCTTTAAG...CTGATTGAGCCTGAAGAGGTGGCCCGACGTTGGGGCATTCAGAAAAACAGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR CCA 90 bp CATAGCTGGCCTGTTTTTCTGAATGCCCCAACGTCGGGCCACCTCTTCAGGCTCGTTGTGTTCATACACTaGGTCGTGGTACTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: HSWPVFLNAPTSGHLFRLVVFIH*VVVLLL
Trigger: AAGCAGGAGTACCACGACCCAGTGTATGAACACAAC...GAGCCTGAAGAGGTGGCCCGACGTTGGGGCATTCAGAAAAACAGGCCAGCTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR TCA 90 bp ATAGTTCATAGCTGGCCTGTTTTTCTGAATGCCCCAACGTCGGGCCACCTCTTCAAAAACTGCCAGAGCTaGAGTGATCCTCGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: IVHSWPVFLNAPTSGHLFKNCQS*SDPRRW
Trigger: CCAACGGCGAGGATCACTTCAGCTCTGGCAGTTTTT...GAAGAGGTGGCCCGACGTTGGGGCATTCAGAAAAACAGGCCAGCTATGAACTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR TCA 90 bp ATAGTTCATAGCTGGCCTGTTTTTCTGAATGCCCCAACGTCGGGCCACCTCTTCCTGTGTCCTCCTCGTTaGTGTGACGTTCCATGTCTG +
Preference number: 4 (lower is better)
Translates to: IVHSWPVFLNAPTSGHLFLCPPR*CDVPCL
Trigger: CAGACATGGAACGTCACATCAACGAGGAGGACACAG...GAAGAGGTGGCCCGACGTTGGGGCATTCAGAAAAACAGGCCAGCTATGAACTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR TCA 90 bp CCCTTCCGGCATGTAGGCCATGCTCTCATCAAAGTGAGAAAGAGGCACTGTGTCCTAACGGGATGTACTTaGCGCTTTCACTTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: PFRHVGHALIKVRKRHCVLTGCT*RFHFLS
Trigger: GGAGAGGAAGTGAAAGCGTCAAGTACATCCCGTTAG...GACACAGTGCCTCTTTCTCACTTTGATGAGAGCATGGCCTACATGCCGGAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR CCA 90 bp TGGCCTGTTTTTCTGAATGCCCCAACGTCGGGCCACCTCTTCAGGCTCAATCAGTTTGGCTCAGACATCTaGCGTTGGTACATAGGACGT +
Preference number: 4 (lower is better)
Translates to: WPVFLNAPTSGHLFRLNQFGSDI*RWYIGR
Trigger: ACGTCCTATGTACCAACGCCAGATGTCTGAGCCAAA...CTGATTGAGCCTGAAGAGGTGGCCCGACGTTGGGGCATTCAGAAAAACAGGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR CCA 90 bp CCCTTCCGGCATGTAGGCCATGCTCTCATCAAAGTGAGAAAGAGGCACTGTGTCCCGCACTGCCAACCATaGTGTTGTGTTCATACACTG +
Preference number: 4 (lower is better)
Translates to: PFRHVGHALIKVRKRHCVPHCQP*CCVHTL
Trigger: CAGTGTATGAACACAACACCATGGTTGGCAGTGCGG...GACACAGTGCCTCTTTCTCACTTTGATGAGAGCATGGCCTACATGCCGGAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR CCA 90 bp ATAGTTCATAGCTGGCCTGTTTTTCTGAATGCCCCAACGTCGGGCCACCTCTTCCTCGCCGTTGGTATGTaGGTCCTTCCCGATACATTC +
Preference number: 4 (lower is better)
Translates to: IVHSWPVFLNAPTSGHLFLAVGM*VLPDTF
Trigger: GAATGTATCGGGAAGGACCCACATACCAACGGCGAG...GAAGAGGTGGCCCGACGTTGGGGCATTCAGAAAAACAGGCCAGCTATGAACTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR GCA 90 bp TGTGACGTTCCATGTCTGTCTTCAGCAGTGGACGCTGATTATCTGGAAAGGCCATTTGGCTGGCCGCACTaGCAACCATGGTGTTGTGTT +
Preference number: 4 (lower is better)
Translates to: CDVPCLSSAVDADYLERPFGWPH*QPWCCV
Trigger: AACACAACACCATGGTTGGCAGTGCGGCCAGCCAAA...TGGCCTTTCCAGATAATCAGCGTCCACTGCTGAAGACAGACATGGAACGTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR GCA 90 bp CCCTTCCGGCATGTAGGCCATGCTCTCATCAAAGTGAGAAAGAGGCACTGTGTCCCGGCATGTAGGCCATaGTCTCATCAAAGTGAGAAA +
Preference number: 4 (lower is better)
Translates to: PFRHVGHALIKVRKRHCVPACRP*SHQSEK
Trigger: TTTCTCACTTTGATGAGAGCATGGCCTACATGCCGG...GACACAGTGCCTCTTTCTCACTTTGATGAGAGCATGGCCTACATGCCGGAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR GCA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCTCCCTCGCCCCTCTaGCCTAGGGGGTGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: IYRSVQKEMMDNISASTMSPSPL*PRGCSA
Trigger: GGCCGAGCACCCCCTAGGGCAGAGGGGCGAGGGAGA...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000405218.6
CDS-3UTR CCA 90 bp CCCTTCCGGCATGTAGGCCATGCTCTCATCAAAGTGAGAAAGAGGCACTGTGTCGAAATCTGTGGTCCATaGGGTAGCTGCTATCTGGTA +
Preference number: 4 (lower is better)
Translates to: PFRHVGHALIKVRKRHCVEICGP*GSCYLV
Trigger: TACCAGATAGCAGCTACCCCATGGACCACAGATTTC...GACACAGTGCCTCTTTCTCACTTTGATGAGAGCATGGCCTACATGCCGGAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR CCA 90 bp GGTTGCAGCAGCCCCCTTCCGGCATGTAGGCCATGCTCTCATCAAAGTGAGAAATTCCCGATACATTCCTaGCTCTTGTTTGATGTCTCC +
Preference number: 4 (lower is better)
Translates to: GCSSPLPACRPCSHQSEKFPIHS*LLFDVS
Trigger: GGAGACATCAAACAAGAGCCAGGAATGTATCGGGAA...TTTCTCACTTTGATGAGAGCATGGCCTACATGCCGGAAGGGGGCTGCTGCAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR CCA 90 bp TGGCCTGTTTTTCTGAATGCCCCAACGTCGGGCCACCTCTTCAGGCTCAATCAGTATCTGGAAAGGCCATaGAGAAAAGGGCTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: WPVFLNAPTSGHLFRLNQYLERP*RKGLLD
Trigger: ATCCAGAAGCCCTTTTCTCCATGGCCTTTCCAGATA...CTGATTGAGCCTGAAGAGGTGGCCCGACGTTGGGGCATTCAGAAAAACAGGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR TCA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGGTTGGGGGCGAGCGGTaGGATGGCTCGGGTTTCAAG +
Preference number: 4 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKVGGER*DGSGFK
Trigger: CTTGAAACCCGAGCCATCTCACCGCTCGCCCCCAAC...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242066.9
CDS-3UTR TCA 90 bp ATAGTTCATAGCTGGCCTGTTTTTCTGAATGCCCCAACGTCGGGCCACCTCTTCTTAAAGGGCTGTTCTTaGCTGCAGGCAGAGCTGATT +
Preference number: 4 (lower is better)
Translates to: IVHSWPVFLNAPTSGHLFLKGCS*LQAELI
Trigger: AATCAGCTCTGCCTGCAGTCAAGAACAGCCCTTTAA...GAAGAGGTGGCCCGACGTTGGGGCATTCAGAAAAACAGGCCAGCTATGAACTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR TCA 90 bp TGTGACGTTCCATGTCTGTCTTCAGCAGTGGACGCTGATTATCTGGAAAGGCCATTCAGCAGTGGACGCTaGTTATCTGGAAAGGCCATG +
Preference number: 4 (lower is better)
Translates to: CDVPCLSSAVDADYLERPFSSGR*LSGKAM
Trigger: CATGGCCTTTCCAGATAATCAGCGTCCACTGCTGAA...TGGCCTTTCCAGATAATCAGCGTCCACTGCTGAAGACAGACATGGAACGTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR TCA 90 bp ATAGTTCATAGCTGGCCTGTTTTTCTGAATGCCCCAACGTCGGGCCACCTCTTCATGCTCTCATCAAAGTaGGAAAGAGGCACTGTGTCC +
Preference number: 4 (lower is better)
Translates to: IVHSWPVFLNAPTSGHLFMLSSK*ERGTVS
Trigger: GGACACAGTGCCTCTTTCTCACTTTGATGAGAGCAT...GAAGAGGTGGCCCGACGTTGGGGCATTCAGAAAAACAGGCCAGCTATGAACTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR TCA 90 bp GGTTGCAGCAGCCCCCTTCCGGCATGTAGGCCATGCTCTCATCAAAGTGAGAAACAAAAACGCCCTGCTTaGCTGTCACTTGTGTTAATA +
Preference number: 4 (lower is better)
Translates to: GCSSPLPACRPCSHQSEKQKRPA*LSLVLI
Trigger: TATTAACACAAGTGACAGTCAAGCAGGGCGTTTTTG...TTTCTCACTTTGATGAGAGCATGGCCTACATGCCGGAAGGGGGCTGCTGCAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR GCA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACAATCAGGCGGCTTGCTaGCCCTTCCCGCGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: RSVQKEMMDNISASTMSYNQAAC*PFPRVS
Trigger: GGAGACCCGCGGGAAGGGGCAGCAAGCCGCCTGATT...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405218.6
CDS-3UTR CCA 90 bp GAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAATGCAGTGGGGACACTaGCGTGCTGGATGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: EAGRKFDYSRRVCDHGSRMQWGH*RAGWCG
Trigger: CCCACACCATCCAGCACGCCAGTGTCCCCACTGCAT...TCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242066.9
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CAAAGGGACTTGGCACACGTCATTAAGTTAAGGATCTTGAGATGGAGAGATTGTTGGAGGGAGGTGAGCTaGGAAGGCCCGGTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: QRDLAHVIKLRILRWRDCWREVS*EGPVRF
Trigger: AAACCTGACCGGGCCTTCCCAGCTCACCTCCCTCCA...ACAATCTCTCCATCTCAAGATCCTTAACTTAATGACGTGTGCCAAGTCCCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242066.9
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CAGAATAAATGTTTAGATTACTCCCACCCACCCTCAAATAAAGTGCACAGTCCAGGAGGGGGAAAGCTTTaGCTGGCCGCACTGCCAACC +
Preference number: 4 (lower is better)
Translates to: QNKCLDYSHPPSNKVHSPGGGKL*LAALPT
Trigger: GGTTGGCAGTGCGGCCAGCCAAAGCTTTCCCCCTCC...TGGACTGTGCACTTTATTTGAGGGTGGGTGGGAGTAATCTAAACATTTATTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CTCATAAATGACAGGGGAAAATGCCCAAGGCAAATAGTCTCCAAGTGGATATTTGGAGGGGGAAAGCTTTaGCTGGCCGCACTGCCAACC +
Preference number: 4 (lower is better)
Translates to: LINDRGKCPRQIVSKWIFGGGKL*LAALPT
Trigger: GGTTGGCAGTGCGGCCAGCCAAAGCTTTCCCCCTCC...AAATATCCACTTGGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATTTATGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGGGAGGGGGAAAGCTTTaGCTGGCCGCACTGCCAACC +
Preference number: 4 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKGGGKL*LAALPT
Trigger: GGTTGGCAGTGCGGCCAGCCAAAGCTTTCCCCCTCC...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp TGGCCTGTTTTTCTGAATGCCCCAACGTCGGGCCACCTCTTCAGGCTCAATCAGCATCATAAAACTGCCTaGGGCCCTTTTCAAACATAC +
Preference number: 4 (lower is better)
Translates to: WPVFLNAPTSGHLFRLNQHHKTA*GPFQTY
Trigger: GTATGTTTGAAAAGGGCCCCAGGCAGTTTTATGATG...CTGATTGAGCCTGAAGAGGTGGCCCGACGTTGGGGCATTCAGAAAAACAGGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR CCA 90 bp CCCTTCCGGCATGTAGGCCATGCTCTCATCAAAGTGAGAAAGAGGCACTGTGTCGGACTTCTATCAACCTaGATCCAAAGAGAGCCAACA +
Preference number: 4 (lower is better)
Translates to: PFRHVGHALIKVRKRHCVGLLST*IQREPT
Trigger: TGTTGGCTCTCTTTGGATCCAGGTTGATAGAAGTCC...GACACAGTGCCTCTTTCTCACTTTGATGAGAGCATGGCCTACATGCCGGAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR CCA 90 bp GGTTGCAGCAGCCCCCTTCCGGCATGTAGGCCATGCTCTCATCAAAGTGAGAAAGATTTCCTCAGGATCTaGACTTCTATCAACCTGGAT +
Preference number: 4 (lower is better)
Translates to: GCSSPLPACRPCSHQSEKDFLRI*TSINLD
Trigger: ATCCAGGTTGATAGAAGTCCAGATCCTGAGGAAATC...TTTCTCACTTTGATGAGAGCATGGCCTACATGCCGGAAGGGGGCTGCTGCAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR TCA 90 bp CTCATAAATGACAGGGGAAAATGCCCAAGGCAAATAGTCTCCAAGTGGATATTTGCTGGCCTGTTTTTCTaGATGCCCCAACGTCGGGCC +
Preference number: 4 (lower is better)
Translates to: LINDRGKCPRQIVSKWIFAGLFF*MPQRRA
Trigger: GGCCCGACGTTGGGGCATTCAGAAAAACAGGCCAGC...AAATATCCACTTGGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATTTATGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTGTCAATCAGGCGGCTTaGTGCCCCTTCCCGCGGGTC +
Preference number: 4 (lower is better)
Translates to: MDNISASTMSYSNFLIFFVNQAA*CPFPRV
Trigger: GACCCGCGGGAAGGGGCAGCAAGCCGCCTGATTGAC...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405218.6
CDS-3UTR CCA 90 bp CAGAATAAATGTTTAGATTACTCCCACCCACCCTCAAATAAAGTGCACAGTCCAATGCAGTGGGGACACTaGCGTGCTGGATGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: QNKCLDYSHPPSNKVHSPMQWGH*RAGWCG
Trigger: CCCACACCATCCAGCACGCCAGTGTCCCCACTGCAT...TGGACTGTGCACTTTATTTGAGGGTGGGTGGGAGTAATCTAAACATTTATTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CTCATAAATGACAGGGGAAAATGCCCAAGGCAAATAGTCTCCAAGTGGATATTTTGGAGGGAGGTGAGCTaGGAAGGCCCGGTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: LINDRGKCPRQIVSKWIFWREVS*EGPVRF
Trigger: AAACCTGACCGGGCCTTCCCAGCTCACCTCCCTCCA...AAATATCCACTTGGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATTTATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGTGGAGGGAGGTGAGCTaGGAAGGCCCGGTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKWREVS*EGPVRF
Trigger: AAACCTGACCGGGCCTTCCCAGCTCACCTCCCTCCA...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CAGAATAAATGTTTAGATTACTCCCACCCACCCTCAAATAAAGTGCACAGTCCATGGAGGGAGGTGAGCTaGGAAGGCCCGGTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: QNKCLDYSHPPSNKVHSPWREVS*EGPVRF
Trigger: AAACCTGACCGGGCCTTCCCAGCTCACCTCCCTCCA...TGGACTGTGCACTTTATTTGAGGGTGGGTGGGAGTAATCTAAACATTTATTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp GAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAAGGACGTCCTTCCCTTaGCATCGTCGGCAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: EAGRKFDYSRRVCDHGSRRTSFP*HRRQRR
Trigger: CCTCCTTTGCCGACGATGCCAAGGGAAGGACGTCCT...TCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp TGTGACGTTCCATGTCTGTCTTCAGCAGTGGACGCTGATTATCTGGAAAGGCCATCATACACTGGGTCGTaGTACTCCTGCTTAAAGCCT +
Preference number: 4 (lower is better)
Translates to: CDVPCLSSAVDADYLERPSYTGS*YSCLKP
Trigger: AGGCTTTAAGCAGGAGTACCACGACCCAGTGTATGA...TGGCCTTTCCAGATAATCAGCGTCCACTGCTGAAGACAGACATGGAACGTCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR CCA 90 bp CAGAATAAATGTTTAGATTACTCCCACCCACCCTCAAATAAAGTGCACAGTCCAGGGGAAAGCTTTGGCTaGCCGCACTGCCAACCATGG +
Preference number: 4 (lower is better)
Translates to: QNKCLDYSHPPSNKVHSPGESFG*PHCQPW
Trigger: CCATGGTTGGCAGTGCGGCCAGCCAAAGCTTTCCCC...TGGACTGTGCACTTTATTTGAGGGTGGGTGGGAGTAATCTAAACATTTATTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CCTTGCTTGAATCTTTTAGCGAGCTATTCAGAGATTCTATATCCCCATTTACTCGGAGGGGGAAAGCTTTaGCTGGCCGCACTGCCAACC +
Preference number: 4 (lower is better)
Translates to: PCLNLLASYSEILYPHLLGGGKL*LAALPT
Trigger: GGTTGGCAGTGCGGCCAGCCAAAGCTTTCCCCCTCC...GAGTAAATGGGGATATAGAATCTCTGAATAGCTCGCTAAAAGATTCAAGCAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACGGAGGGGGAAAGCTTTaGCTGGCCGCACTGCCAACC +
Preference number: 4 (lower is better)
Translates to: RSVQKEMMDNISASTMSYGGGKL*LAALPT
Trigger: GGTTGGCAGTGCGGCCAGCCAAAGCTTTCCCCCTCC...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CCCTTCCGGCATGTAGGCCATGCTCTCATCAAAGTGAGAAAGAGGCACTGTGTCTTGAAAGAGTTCTTCTaGATCATGAGCCAGATCTCT +
Preference number: 4 (lower is better)
Translates to: PFRHVGHALIKVRKRHCVLKEFF*IMSQIS
Trigger: AGAGATCTGGCTCATGATTCAGAAGAACTCTTTCAA...GACACAGTGCCTCTTTCTCACTTTGATGAGAGCATGGCCTACATGCCGGAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR TCA 90 bp TGTGACGTTCCATGTCTGTCTTCAGCAGTGGACGCTGATTATCTGGAAAGGCCATCAGGTTTCGGTGTATaGGTTGAGTTTGGAGATGCA +
Preference number: 4 (lower is better)
Translates to: CDVPCLSSAVDADYLERPSGFGV*VEFGDA
Trigger: TGCATCTCCAAACTCAACTCATACACCGAAACCTGA...TGGCCTTTCCAGATAATCAGCGTCCACTGCTGAAGACAGACATGGAACGTCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR TCA 90 bp CCTTGCTTGAATCTTTTAGCGAGCTATTCAGAGATTCTATATCCCCATTTACTCGCTGGCCTGTTTTTCTaGATGCCCCAACGTCGGGCC +
Preference number: 4 (lower is better)
Translates to: PCLNLLASYSEILYPHLLAGLFF*MPQRRA
Trigger: GGCCCGACGTTGGGGCATTCAGAAAAACAGGCCAGC...GAGTAAATGGGGATATAGAATCTCTGAATAGCTCGCTAAAAGATTCAAGCAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CTCATAAATGACAGGGGAAAATGCCCAAGGCAAATAGTCTCCAAGTGGATATTTCTCCGTGCGGTGTTCTaGATAACAGCCCTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: LINDRGKCPRQIVSKWIFLRAVF*ITALPS
Trigger: TGAGGGCAGGGCTGTTATTCAGAACACCGCACGGAG...AAATATCCACTTGGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATTTATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CAGAATAAATGTTTAGATTACTCCCACCCACCCTCAAATAAAGTGCACAGTCCACTCCGTGCGGTGTTCTaGATAACAGCCCTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: QNKCLDYSHPPSNKVHSPLRAVF*ITALPS
Trigger: TGAGGGCAGGGCTGTTATTCAGAACACCGCACGGAG...TGGACTGTGCACTTTATTTGAGGGTGGGTGGGAGTAATCTAAACATTTATTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp TGTGACGTTCCATGTCTGTCTTCAGCAGTGGACGCTGATTATCTGGAAAGGCCATTCCTGGCTCTTGTTTaGTGTCTCCTATGGTCAGTA +
Preference number: 4 (lower is better)
Translates to: CDVPCLSSAVDADYLERPFLALV*CLLWSV
Trigger: TACTGACCATAGGAGACATCAAACAAGAGCCAGGAA...TGGCCTTTCCAGATAATCAGCGTCCACTGCTGAAGACAGACATGGAACGTCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR GCA 90 bp GAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAGGGTCGTGGTACTCCTaGTTAAAGCCTTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: EAGRKFDYSRRVCDHGSRGSWYS*LKPCGG
Trigger: CCCACCACAAGGCTTTAAGCAGGAGTACCACGACCC...TCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CCCTTCCGGCATGTAGGCCATGCTCTCATCAAAGTGAGAAAGAGGCACTGTGTCTCTGAACATGGACTGTaGGGTTCTTTCTTGATTTTC +
Preference number: 4 (lower is better)
Translates to: PFRHVGHALIKVRKRHCVSEHGL*GSFLIF
Trigger: GAAAATCAAGAAAGAACCCCACAGTCCATGTTCAGA...GACACAGTGCCTCTTTCTCACTTTGATGAGAGCATGGCCTACATGCCGGAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR CCA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGAGGACGTCCTTCCCTTaGCATCGTCGGCAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKRTSFP*HRRQRR
Trigger: CCTCCTTTGCCGACGATGCCAAGGGAAGGACGTCCT...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACGGGGAAAGCTTTGGCTaGCCGCACTGCCAACCATGG +
Preference number: 4 (lower is better)
Translates to: RSVQKEMMDNISASTMSYGESFG*PHCQPW
Trigger: CCATGGTTGGCAGTGCGGCCAGCCAAAGCTTTCCCC...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTGGAGGGGGAAAGCTTTaGCTGGCCGCACTGCCAACC +
Preference number: 4 (lower is better)
Translates to: MDNISASTMSYSNFLIFFGGGKL*LAALPT
Trigger: GGTTGGCAGTGCGGCCAGCCAAAGCTTTCCCCCTCC...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CCTTGCTTGAATCTTTTAGCGAGCTATTCAGAGATTCTATATCCCCATTTACTCCCAGCACTTCCCCCTTaGAAGCCGAAAGCGCCTCTG +
Preference number: 4 (lower is better)
Translates to: PCLNLLASYSEILYPHLLPALPP*KPKAPL
Trigger: CAGAGGCGCTTTCGGCTTCCAAGGGGGAAGTGCTGG...GAGTAAATGGGGATATAGAATCTCTGAATAGCTCGCTAAAAGATTCAAGCAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000405192.6
CDS-3UTR TCA 90 bp TTGAGTCATCTATTTTGTCCTGAAATGCTATCTGTAGTTAACTGCACTGCTTATTCTGCAGCCCGAGCCTaGCGGGTATCCAGGGTAACC +
Preference number: 4 (lower is better)
Translates to: LSHLFCPEMLSVVNCTAYSAARA*RVSRVT
Trigger: GGTTACCCTGGATACCCGTCAGGCTCGGGCTGCAGA...ATAAGCAGTGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242066.9
CDS-3UTR TCA 90 bp ATAGTTCATAGCTGGCCTGTTTTTCTGAATGCCCCAACGTCGGGCCACCTCTTCAGTTCTTCTGAATCATaGGCCAGATCTCTGTTAATG +
Preference number: 4 (lower is better)
Translates to: IVHSWPVFLNAPTSGHLFSSSES*ARSLLM
Trigger: CATTAACAGAGATCTGGCTCATGATTCAGAAGAACT...GAAGAGGTGGCCCGACGTTGGGGCATTCAGAAAAACAGGCCAGCTATGAACTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR TCA 90 bp TGTGACGTTCCATGTCTGTCTTCAGCAGTGGACGCTGATTATCTGGAAAGGCCATTTCGGTGTATGAGTTaGGTTTGGAGATGCATGATG +
Preference number: 4 (lower is better)
Translates to: CDVPCLSSAVDADYLERPFRCMS*VWRCMM
Trigger: CATCATGCATCTCCAAACTCAACTCATACACCGAAA...TGGCCTTTCCAGATAATCAGCGTCCACTGCTGAAGACAGACATGGAACGTCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR TCA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGTCTGTTCTGCTGGGATaGGCCAGGAAGCCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKSVLLG*ARKPSC
Trigger: GCAAGAAGGCTTCCTGGCTCATCCCAGCAGAACAGA...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CAGAATAAATGTTTAGATTACTCCCACCCACCCTCAAATAAAGTGCACAGTCCATCTGTTCTGCTGGGATaGGCCAGGAAGCCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: QNKCLDYSHPPSNKVHSPSVLLG*ARKPSC
Trigger: GCAAGAAGGCTTCCTGGCTCATCCCAGCAGAACAGA...TGGACTGTGCACTTTATTTGAGGGTGGGTGGGAGTAATCTAAACATTTATTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CTCATAAATGACAGGGGAAAATGCCCAAGGCAAATAGTCTCCAAGTGGATATTTCTGCCAGAGCTGAAGTaGTCCTCGCCGTTGGTATGT +
Preference number: 4 (lower is better)
Translates to: LINDRGKCPRQIVSKWIFLPELK*SSPLVC
Trigger: ACATACCAACGGCGAGGATCACTTCAGCTCTGGCAG...AAATATCCACTTGGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATTTATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CAGAATAAATGTTTAGATTACTCCCACCCACCCTCAAATAAAGTGCACAGTCCACTGCCAGAGCTGAAGTaGTCCTCGCCGTTGGTATGT +
Preference number: 4 (lower is better)
Translates to: QNKCLDYSHPPSNKVHSPLPELK*SSPLVC
Trigger: ACATACCAACGGCGAGGATCACTTCAGCTCTGGCAG...TGGACTGTGCACTTTATTTGAGGGTGGGTGGGAGTAATCTAAACATTTATTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGGCTGGCCTGTTTTTCTaGATGCCCCAACGTCGGGCC +
Preference number: 4 (lower is better)
Translates to: IYRSVQKEMMDNISASTMAGLFF*MPQRRA
Trigger: GGCCCGACGTTGGGGCATTCAGAAAAACAGGCCAGC...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTGCTGGCCTGTTTTTCTaGATGCCCCAACGTCGGGCC +
Preference number: 4 (lower is better)
Translates to: MDNISASTMSYSNFLIFFAGLFF*MPQRRA
Trigger: GGCCCGACGTTGGGGCATTCAGAAAAACAGGCCAGC...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp GAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAGATTGAAGCTGGCCTGTTTTTCTaGATGCCCCAACGTCGGGCC +
Preference number: 4 (lower is better)
Translates to: EGNLTIVEEYVTMEAEIEAGLFF*MPQRRA
Trigger: GGCCCGACGTTGGGGCATTCAGAAAAACAGGCCAGC...TTCAATCTCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGTACCCCGGGCAGCTCTaGTTCGCAAACGTGTGCAAA +
Preference number: 4 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKYPGQL*FANVCK
Trigger: TTTGCACACGTTTGCGAATCAGAGCTGCCCGGGGTA...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000430479.6
CDS-3UTR GCA 90 bp TGTGACGTTCCATGTCTGTCTTCAGCAGTGGACGCTGATTATCTGGAAAGGCCAAAAATCCATCCATGCTaGTGCTCTTCGCAAATCTCA +
Preference number: 4 (lower is better)
Translates to: CDVPCLSSAVDADYLERPKIHPC*CSSQIS
Trigger: TGAGATTTGCGAAGAGCAGCAGCATGGATGGATTTT...TGGCCTTTCCAGATAATCAGCGTCCACTGCTGAAGACAGACATGGAACGTCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR GCA 90 bp CTCATAAATGACAGGGGAAAATGCCCAAGGCAAATAGTCTCCAAGTGGATATTTGGTCCATGGGGTAGCTaGTATCTGGTATGGACTGCG +
Preference number: 4 (lower is better)
Translates to: LINDRGKCPRQIVSKWIFGPWGS*YLVWTA
Trigger: CGCAGTCCATACCAGATAGCAGCTACCCCATGGACC...AAATATCCACTTGGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATTTATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp CTCATAAATGACAGGGGAAAATGCCCAAGGCAAATAGTCTCCAAGTGGATATTTGGGTCGTGGTACTCCTaGTTAAAGCCTTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: LINDRGKCPRQIVSKWIFGSWYS*LKPCGG
Trigger: CCCACCACAAGGCTTTAAGCAGGAGTACCACGACCC...AAATATCCACTTGGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATTTATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp CAGAATAAATGTTTAGATTACTCCCACCCACCCTCAAATAAAGTGCACAGTCCAGGGTCGTGGTACTCCTaGTTAAAGCCTTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: QNKCLDYSHPPSNKVHSPGSWYS*LKPCGG
Trigger: CCCACCACAAGGCTTTAAGCAGGAGTACCACGACCC...TGGACTGTGCACTTTATTTGAGGGTGGGTGGGAGTAATCTAAACATTTATTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp CAAAGGGACTTGGCACACGTCATTAAGTTAAGGATCTTGAGATGGAGAGATTGTTTTGGCTGGCCGCACTaGCAACCATGGTGTTGTGTT +
Preference number: 4 (lower is better)
Translates to: QRDLAHVIKLRILRWRDCFGWPH*QPWCCV
Trigger: AACACAACACCATGGTTGGCAGTGCGGCCAGCCAAA...ACAATCTCTCCATCTCAAGATCCTTAACTTAATGACGTGTGCCAAGTCCCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp CAAAGGGACTTGGCACACGTCATTAAGTTAAGGATCTTGAGATGGAGAGATTGTTACAGCCTTCTGTTCTaGTGGGATGAGCCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: QRDLAHVIKLRILRWRDCYSLLF*WDEPGS
Trigger: GCTTCCTGGCTCATCCCAGCAGAACAGAAGGCTGTA...ACAATCTCTCCATCTCAAGATCCTTAACTTAATGACGTGTGCCAAGTCCCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGGCCTGTTTTTCTGAATaGCCCAACGTCGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKACFSE*PNVGPP
Trigger: AGGTGGCCCGACGTTGGGGCATTCAGAAAAACAGGC...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp CTCATAAATGACAGGGGAAAATGCCCAAGGCAAATAGTCTCCAAGTGGATATTTGCCTGTTTTTCTGAATaGCCCAACGTCGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: LINDRGKCPRQIVSKWIFACFSE*PNVGPP
Trigger: AGGTGGCCCGACGTTGGGGCATTCAGAAAAACAGGC...AAATATCCACTTGGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATTTATGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGTTTGAGTGCAGCAGCTaGTGCTGCCCTCCATCTCCT +
Preference number: 4 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKFECSS*CCPPSP
Trigger: AGGAGATGGAGGGCAGCAGCAGCTGCTGCACTCAAA...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405358.8
CDS-3UTR GCA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTCTCTCGATGTTTCCCTaGGCGGTCGGTGTACCCCGG +
Preference number: 4 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISLSMFP*AVGVPR
Trigger: CCGGGGTACACCGACCGCGCAGGGAAACATCGAGAG...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000430479.6
CDS-3UTR CCA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGATGCAGTGGGGACACTaGCGTGCTGGATGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: IYRSVQKEMMDNISASTMMQWGH*RAGWCG
Trigger: CCCACACCATCCAGCACGCCAGTGTCCCCACTGCAT...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTATGCAGTGGGGACACTaGCGTGCTGGATGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: MDNISASTMSYSNFLIFFMQWGH*RAGWCG
Trigger: CCCACACCATCCAGCACGCCAGTGTCCCCACTGCAT...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGAGATGCATGATGCAGTaGGGACACTGGCGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKRCMMQ*GHWRAG
Trigger: TCCAGCACGCCAGTGTCCCCACTGCATCATGCATCT...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CAGAATAAATGTTTAGATTACTCCCACCCACCCTCAAATAAAGTGCACAGTCCAAGATGCATGATGCAGTaGGGACACTGGCGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: QNKCLDYSHPPSNKVHSPRCMMQ*GHWRAG
Trigger: TCCAGCACGCCAGTGTCCCCACTGCATCATGCATCT...TGGACTGTGCACTTTATTTGAGGGTGGGTGGGAGTAATCTAAACATTTATTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CAGAATAAATGTTTAGATTACTCCCACCCACCCTCAAATAAAGTGCACAGTCCATGGTATGGACTGCGATaGAGGGAGGTGAGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: QNKCLDYSHPPSNKVHSPWYGLR*REVSWE
Trigger: TTCCCAGCTCACCTCCCTCCATCGCAGTCCATACCA...TGGACTGTGCACTTTATTTGAGGGTGGGTGGGAGTAATCTAAACATTTATTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CAGAATAAATGTTTAGATTACTCCCACCCACCCTCAAATAAAGTGCACAGTCCACAGGGTTCAGAAAGCTaGCGGCGAAATCTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: QNKCLDYSHPPSNKVHSPQGSES*RRNLWS
Trigger: GGACCACAGATTTCGCCGCCAGCTTTCTGAACCCTG...TGGACTGTGCACTTTATTTGAGGGTGGGTGGGAGTAATCTAAACATTTATTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CTCATAAATGACAGGGGAAAATGCCCAAGGCAAATAGTCTCCAAGTGGATATTTCAGGGTTCAGAAAGCTaGCGGCGAAATCTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: LINDRGKCPRQIVSKWIFQGSES*RRNLWS
Trigger: GGACCACAGATTTCGCCGCCAGCTTTCTGAACCCTG...AAATATCCACTTGGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATTTATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACAGGACGTCCTTCCCTTaGCATCGTCGGCAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: RSVQKEMMDNISASTMSYRTSFP*HRRQRR
Trigger: CCTCCTTTGCCGACGATGCCAAGGGAAGGACGTCCT...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CCTTGCTTGAATCTTTTAGCGAGCTATTCAGAGATTCTATATCCCCATTTACTCAGGACGTCCTTCCCTTaGCATCGTCGGCAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: PCLNLLASYSEILYPHLLRTSFP*HRRQRR
Trigger: CCTCCTTTGCCGACGATGCCAAGGGAAGGACGTCCT...GAGTAAATGGGGATATAGAATCTCTGAATAGCTCGCTAAAAGATTCAAGCAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp GAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAGATTGAAGGGGAAAGCTTTGGCTaGCCGCACTGCCAACCATGG +
Preference number: 4 (lower is better)
Translates to: EGNLTIVEEYVTMEAEIEGESFG*PHCQPW
Trigger: CCATGGTTGGCAGTGCGGCCAGCCAAAGCTTTCCCC...TTCAATCTCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTGGGGAAAGCTTTGGCTaGCCGCACTGCCAACCATGG +
Preference number: 4 (lower is better)
Translates to: MDNISASTMSYSNFLIFFGESFG*PHCQPW
Trigger: CCATGGTTGGCAGTGCGGCCAGCCAAAGCTTTCCCC...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTGGAGGGGGAAAGCTTTaGCTGGCCGCACTGCCAACC +
Preference number: 4 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISGGGKL*LAALPT
Trigger: GGTTGGCAGTGCGGCCAGCCAAAGCTTTCCCCCTCC...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp TTGAGTCATCTATTTTGTCCTGAAATGCTATCTGTAGTTAACTGCACTGCTTATGGAGGGGGAAAGCTTTaGCTGGCCGCACTGCCAACC +
Preference number: 4 (lower is better)
Translates to: LSHLFCPEMLSVVNCTAYGGGKL*LAALPT
Trigger: GGTTGGCAGTGCGGCCAGCCAAAGCTTTCCCCCTCC...ATAAGCAGTGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CAAAGGGACTTGGCACACGTCATTAAGTTAAGGATCTTGAGATGGAGAGATTGTCTCGCCGTTGGTATGTaGGTCCTTCCCGATACATTC +
Preference number: 4 (lower is better)
Translates to: QRDLAHVIKLRILRWRDCLAVGM*VLPDTF
Trigger: GAATGTATCGGGAAGGACCCACATACCAACGGCGAG...ACAATCTCTCCATCTCAAGATCCTTAACTTAATGACGTGTGCCAAGTCCCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGAGTGATCCTCGCCGTTaGTATGTGGGTCCTTCCCGA +
Preference number: 4 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKSDPRR*YVGPSR
Trigger: TCGGGAAGGACCCACATACCAACGGCGAGGATCACT...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CTCATAAATGACAGGGGAAAATGCCCAAGGCAAATAGTCTCCAAGTGGATATTTAGTGATCCTCGCCGTTaGTATGTGGGTCCTTCCCGA +
Preference number: 4 (lower is better)
Translates to: LINDRGKCPRQIVSKWIFSDPRR*YVGPSR
Trigger: TCGGGAAGGACCCACATACCAACGGCGAGGATCACT...AAATATCCACTTGGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATTTATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CAGAATAAATGTTTAGATTACTCCCACCCACCCTCAAATAAAGTGCACAGTCCAAGTGATCCTCGCCGTTaGTATGTGGGTCCTTCCCGA +
Preference number: 4 (lower is better)
Translates to: QNKCLDYSHPPSNKVHSPSDPRR*YVGPSR
Trigger: TCGGGAAGGACCCACATACCAACGGCGAGGATCACT...TGGACTGTGCACTTTATTTGAGGGTGGGTGGGAGTAATCTAAACATTTATTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp ATAGTTCATAGCTGGCCTGTTTTTCTGAATGCCCCAACGTCGGGCCACCTCTTCTTTCTTGATTTTCAGTaGCAGGCCATGAAAAGCCAA +
Preference number: 4 (lower is better)
Translates to: IVHSWPVFLNAPTSGHLFFLDFQ*QAMKSQ
Trigger: TTGGCTTTTCATGGCCTGCCACTGAAAATCAAGAAA...GAAGAGGTGGCCCGACGTTGGGGCATTCAGAAAAACAGGCCAGCTATGAACTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR TCA 90 bp CAGAATAAATGTTTAGATTACTCCCACCCACCCTCAAATAAAGTGCACAGTCCAGGCAGAGCTGATTTCTaGACATGGACTGTGGGGTTC +
Preference number: 4 (lower is better)
Translates to: QNKCLDYSHPPSNKVHSPGRADF*TWTVGF
Trigger: GAACCCCACAGTCCATGTTCAGAAATCAGCTCTGCC...TGGACTGTGCACTTTATTTGAGGGTGGGTGGGAGTAATCTAAACATTTATTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CCTTGCTTGAATCTTTTAGCGAGCTATTCAGAGATTCTATATCCCCATTTACTCTCTGTTCTGCTGGGATaGGCCAGGAAGCCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: PCLNLLASYSEILYPHLLSVLLG*ARKPSC
Trigger: GCAAGAAGGCTTCCTGGCTCATCCCAGCAGAACAGA...GAGTAAATGGGGATATAGAATCTCTGAATAGCTCGCTAAAAGATTCAAGCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CAGAATAAATGTTTAGATTACTCCCACCCACCCTCAAATAAAGTGCACAGTCCAAAAAACTGCCAGAGCTaGAGTGATCCTCGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: QNKCLDYSHPPSNKVHSPKNCQS*SDPRRW
Trigger: CCAACGGCGAGGATCACTTCAGCTCTGGCAGTTTTT...TGGACTGTGCACTTTATTTGAGGGTGGGTGGGAGTAATCTAAACATTTATTCTG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CTCATAAATGACAGGGGAAAATGCCCAAGGCAAATAGTCTCCAAGTGGATATTTAAAAACTGCCAGAGCTaGAGTGATCCTCGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: LINDRGKCPRQIVSKWIFKNCQS*SDPRRW
Trigger: CCAACGGCGAGGATCACTTCAGCTCTGGCAGTTTTT...AAATATCCACTTGGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATTTATGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTGCTGGCCTGTTTTTCTaGATGCCCCAACGTCGGGCC +
Preference number: 4 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISAGLFF*MPQRRA
Trigger: GGCCCGACGTTGGGGCATTCAGAAAAACAGGCCAGC...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp TTGAGTCATCTATTTTGTCCTGAAATGCTATCTGTAGTTAACTGCACTGCTTATGCTGGCCTGTTTTTCTaGATGCCCCAACGTCGGGCC +
Preference number: 4 (lower is better)
Translates to: LSHLFCPEMLSVVNCTAYAGLFF*MPQRRA
Trigger: GGCCCGACGTTGGGGCATTCAGAAAAACAGGCCAGC...ATAAGCAGTGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp GAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGATCCTCCTCGTTGATGTaGCGTTCCATGTCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: EAGRKFDYSRRVCDHGSRSSSLM*RSMSVF
Trigger: GAAGACAGACATGGAACGTCACATCAACGAGGAGGA...TCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CTCATAAATGACAGGGGAAAATGCCCAAGGCAAATAGTCTCCAAGTGGATATTTCTGTGTCCTCCTCGTTaGTGTGACGTTCCATGTCTG +
Preference number: 4 (lower is better)
Translates to: LINDRGKCPRQIVSKWIFLCPPR*CDVPCL
Trigger: CAGACATGGAACGTCACATCAACGAGGAGGACACAG...AAATATCCACTTGGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATTTATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CAGAATAAATGTTTAGATTACTCCCACCCACCCTCAAATAAAGTGCACAGTCCAAATGCTACTGGCCTATaGCTCAGTTTGGCGCCAGAG +
Preference number: 4 (lower is better)
Translates to: QNKCLDYSHPPSNKVHSPNATGL*LSLAPE
Trigger: CTCTGGCGCCAAACTGAGTCATAGGCCAGTAGCATT...TGGACTGTGCACTTTATTTGAGGGTGGGTGGGAGTAATCTAAACATTTATTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGAATGCTACTGGCCTATaGCTCAGTTTGGCGCCAGAG +
Preference number: 4 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKNATGL*LSLAPE
Trigger: CTCTGGCGCCAAACTGAGTCATAGGCCAGTAGCATT...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CTCATAAATGACAGGGGAAAATGCCCAAGGCAAATAGTCTCCAAGTGGATATTTAATGCTACTGGCCTATaGCTCAGTTTGGCGCCAGAG +
Preference number: 4 (lower is better)
Translates to: LINDRGKCPRQIVSKWIFNATGL*LSLAPE
Trigger: CTCTGGCGCCAAACTGAGTCATAGGCCAGTAGCATT...AAATATCCACTTGGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATTTATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp TATAAGAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAACTCCGTGCGGTGTTCTaGATAACAGCCCTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: YKRQEGNLTIVEEYVTMELRAVF*ITALPS
Trigger: TGAGGGCAGGGCTGTTATTCAGAACACCGCACGGAG...TTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTCTTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTCTGATCCTCCTTCTCTaGAGCCCGAGCCTGACGGGT +
Preference number: 4 (lower is better)
Translates to: VMVIIQLQRELPILWLSSLILLL*SPSLTG
Trigger: ACCCGTCAGGCTCGGGCTGCAGAGAAGGAGGATCAG...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242066.9
CDS-3UTR GCA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACGGTCCATGGGGTAGCTaGTATCTGGTATGGACTGCG +
Preference number: 4 (lower is better)
Translates to: RSVQKEMMDNISASTMSYGPWGS*YLVWTA
Trigger: CGCAGTCCATACCAGATAGCAGCTACCCCATGGACC...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp CCTTGCTTGAATCTTTTAGCGAGCTATTCAGAGATTCTATATCCCCATTTACTCGGGTCGTGGTACTCCTaGTTAAAGCCTTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: PCLNLLASYSEILYPHLLGSWYS*LKPCGG
Trigger: CCCACCACAAGGCTTTAAGCAGGAGTACCACGACCC...GAGTAAATGGGGATATAGAATCTCTGAATAGCTCGCTAAAAGATTCAAGCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACGGGTCGTGGTACTCCTaGTTAAAGCCTTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: RSVQKEMMDNISASTMSYGSWYS*LKPCGG
Trigger: CCCACCACAAGGCTTTAAGCAGGAGTACCACGACCC...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp CTCATAAATGACAGGGGAAAATGCCCAAGGCAAATAGTCTCCAAGTGGATATTTTTTGGCTGGCCGCACTaGCAACCATGGTGTTGTGTT +
Preference number: 4 (lower is better)
Translates to: LINDRGKCPRQIVSKWIFFGWPH*QPWCCV
Trigger: AACACAACACCATGGTTGGCAGTGCGGCCAGCCAAA...AAATATCCACTTGGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATTTATGAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGTTTGGCTGGCCGCACTaGCAACCATGGTGTTGTGTT +
Preference number: 4 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKFGWPH*QPWCCV
Trigger: AACACAACACCATGGTTGGCAGTGCGGCCAGCCAAA...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp CTCATAAATGACAGGGGAAAATGCCCAAGGCAAATAGTCTCCAAGTGGATATTTTACAGCCTTCTGTTCTaGTGGGATGAGCCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: LINDRGKCPRQIVSKWIFYSLLF*WDEPGS
Trigger: GCTTCCTGGCTCATCCCAGCAGAACAGAAGGCTGTA...AAATATCCACTTGGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATTTATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACGCCTGTTTTTCTGAATaGCCCAACGTCGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: RSVQKEMMDNISASTMSYACFSE*PNVGPP
Trigger: AGGTGGCCCGACGTTGGGGCATTCAGAAAAACAGGC...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp GAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAAGTCTTCCTCCTCCGTaGGGTGTTCTGAATAACAGC +
Preference number: 4 (lower is better)
Translates to: EAGRKFDYSRRVCDHGSRSLPPP*GVLNNS
Trigger: GCTGTTATTCAGAACACCGCACGGAGGAGGAAGACT...TCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp TATAAGAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGGGCGAGCGGTGAGATaGCTCGGGTTTCAAGGACAA +
Preference number: 4 (lower is better)
Translates to: YKRQEGNLTIVEEYVTMEGRAVR*LGFQGQ
Trigger: TTGTCCTTGAAACCCGAGCCATCTCACCGCTCGCCC...TTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTCTTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242066.9
CDS-3UTR CCA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTATGCAGTGGGGACACTaGCGTGCTGGATGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISMQWGH*RAGWCG
Trigger: CCCACACCATCCAGCACGCCAGTGTCCCCACTGCAT...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CCTTGCTTGAATCTTTTAGCGAGCTATTCAGAGATTCTATATCCCCATTTACTCAGATGCATGATGCAGTaGGGACACTGGCGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: PCLNLLASYSEILYPHLLRCMMQ*GHWRAG
Trigger: TCCAGCACGCCAGTGTCCCCACTGCATCATGCATCT...GAGTAAATGGGGATATAGAATCTCTGAATAGCTCGCTAAAAGATTCAAGCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTTGGAGGGAGGTGAGCTaGGAAGGCCCGGTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: VMVIIQLQRELPILWLSSWREVS*EGPVRF
Trigger: AAACCTGACCGGGCCTTCCCAGCTCACCTCCCTCCA...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTTGGAGGGAGGTGAGCTaGGAAGGCCCGGTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISWREVS*EGPVRF
Trigger: AAACCTGACCGGGCCTTCCCAGCTCACCTCCCTCCA...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CCTTGCTTGAATCTTTTAGCGAGCTATTCAGAGATTCTATATCCCCATTTACTCTGGTATGGACTGCGATaGAGGGAGGTGAGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: PCLNLLASYSEILYPHLLWYGLR*REVSWE
Trigger: TTCCCAGCTCACCTCCCTCCATCGCAGTCCATACCA...GAGTAAATGGGGATATAGAATCTCTGAATAGCTCGCTAAAAGATTCAAGCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACTGGTATGGACTGCGATaGAGGGAGGTGAGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: RSVQKEMMDNISASTMSYWYGLR*REVSWE
Trigger: TTCCCAGCTCACCTCCCTCCATCGCAGTCCATACCA...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CTCATAAATGACAGGGGAAAATGCCCAAGGCAAATAGTCTCCAAGTGGATATTTAGCTGCTATCTGGTATaGACTGCGATGGAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: LINDRGKCPRQIVSKWIFSCYLV*TAMEGG
Trigger: ACCTCCCTCCATCGCAGTCCATACCAGATAGCAGCT...AAATATCCACTTGGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATTTATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGAGCTGCTATCTGGTATaGACTGCGATGGAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKSCYLV*TAMEGG
Trigger: ACCTCCCTCCATCGCAGTCCATACCAGATAGCAGCT...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CCTTGCTTGAATCTTTTAGCGAGCTATTCAGAGATTCTATATCCCCATTTACTCGGGGTAGCTGCTATCTaGTATGGACTGCGATGGAGG +
Preference number: 4 (lower is better)
Translates to: PCLNLLASYSEILYPHLLGVAAI*YGLRWR
Trigger: CCTCCATCGCAGTCCATACCAGATAGCAGCTACCCC...GAGTAAATGGGGATATAGAATCTCTGAATAGCTCGCTAAAAGATTCAAGCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp GAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAGATTGAAAGGACGTCCTTCCCTTaGCATCGTCGGCAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: EGNLTIVEEYVTMEAEIERTSFP*HRRQRR
Trigger: CCTCCTTTGCCGACGATGCCAAGGGAAGGACGTCCT...TTCAATCTCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp TATAAGAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAAGGACGTCCTTCCCTTaGCATCGTCGGCAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: YKRQEGNLTIVEEYVTMERTSFP*HRRQRR
Trigger: CCTCCTTTGCCGACGATGCCAAGGGAAGGACGTCCT...TTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTCTTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTAGGACGTCCTTCCCTTaGCATCGTCGGCAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: MDNISASTMSYSNFLIFFRTSFP*HRRQRR
Trigger: CCTCCTTTGCCGACGATGCCAAGGGAAGGACGTCCT...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp GAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGACTGCTTAAAGCCTTGTaGTGGGAAGGGGATGTTTGG +
Preference number: 4 (lower is better)
Translates to: EAGRKFDYSRRVCDHGSRLLKAL*WEGDVW
Trigger: CCAAACATCCCCTTCCCACCACAAGGCTTTAAGCAG...TCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTGGGGAAAGCTTTGGCTaGCCGCACTGCCAACCATGG +
Preference number: 4 (lower is better)
Translates to: VMVIIQLQRELPILWLSSGESFG*PHCQPW
Trigger: CCATGGTTGGCAGTGCGGCCAGCCAAAGCTTTCCCC...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp TTGAGTCATCTATTTTGTCCTGAAATGCTATCTGTAGTTAACTGCACTGCTTATGGGGAAAGCTTTGGCTaGCCGCACTGCCAACCATGG +
Preference number: 4 (lower is better)
Translates to: LSHLFCPEMLSVVNCTAYGESFG*PHCQPW
Trigger: CCATGGTTGGCAGTGCGGCCAGCCAAAGCTTTCCCC...ATAAGCAGTGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CAGAATAAATGTTTAGATTACTCCCACCCACCCTCAAATAAAGTGCACAGTCCACTCGCCGTTGGTATGTaGGTCCTTCCCGATACATTC +
Preference number: 4 (lower is better)
Translates to: QNKCLDYSHPPSNKVHSPLAVGM*VLPDTF
Trigger: GAATGTATCGGGAAGGACCCACATACCAACGGCGAG...TGGACTGTGCACTTTATTTGAGGGTGGGTGGGAGTAATCTAAACATTTATTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACAGTGATCCTCGCCGTTaGTATGTGGGTCCTTCCCGA +
Preference number: 4 (lower is better)
Translates to: RSVQKEMMDNISASTMSYSDPRR*YVGPSR
Trigger: TCGGGAAGGACCCACATACCAACGGCGAGGATCACT...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CCTTGCTTGAATCTTTTAGCGAGCTATTCAGAGATTCTATATCCCCATTTACTCAGTGATCCTCGCCGTTaGTATGTGGGTCCTTCCCGA +
Preference number: 4 (lower is better)
Translates to: PCLNLLASYSEILYPHLLSDPRR*YVGPSR
Trigger: TCGGGAAGGACCCACATACCAACGGCGAGGATCACT...GAGTAAATGGGGATATAGAATCTCTGAATAGCTCGCTAAAAGATTCAAGCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp TGTGACGTTCCATGTCTGTCTTCAGCAGTGGACGCTGATTATCTGGAAAGGCCATTCAGCCTGATAGTCTaGTACAAACTGCTCATCATT +
Preference number: 4 (lower is better)
Translates to: CDVPCLSSAVDADYLERPFSLIV*YKLLII
Trigger: AATGATGAGCAGTTTGTACCAGACTATCAGGCTGAA...TGGCCTTTCCAGATAATCAGCGTCCACTGCTGAAGACAGACATGGAACGTCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR CCA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTCCAGCACTTCCCCCTTaGAAGCCGAAAGCGCCTCTG +
Preference number: 4 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISPALPP*KPKAPL
Trigger: CAGAGGCGCTTTCGGCTTCCAAGGGGGAAGTGCTGG...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000405192.6
ENST00000405218.6
3UTR CAA 72 bp CTGGCCTATGACTCAGTTTGGCGCCAGAGTCCAAAATaGTGCCCCTCATTTACAGTCATGGTGATTATTCAA +
Preference number: 4 (lower is better)
Translates to: LAYDSVWRQSPK*CPSFTVMVIIQ
Trigger: TTGAATAATCACCATGACTGTAAATGAGGGGCACAATTTTGGACTCTGGCGCCAAACTGAGTCATAGGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CAGAATAAATGTTTAGATTACTCCCACCCACCCTCAAATAAAGTGCACAGTCCACACGCTGACTATTGGTaGCCATGTAAGGCACTTGCT +
Preference number: 4 (lower is better)
Translates to: QNKCLDYSHPPSNKVHSPHADYW*PCKALA
Trigger: AGCAAGTGCCTTACATGGTCACCAATAGTCAGCGTG...TGGACTGTGCACTTTATTTGAGGGTGGGTGGGAGTAATCTAAACATTTATTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000405192.6
ENST00000405218.6
ENST00000430479.6
CDS-3UTR TCA 90 bp GAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGATGTGGGGTTCTTTCTTaGTTTTCAGTGGCAGGCCAT +
Preference number: 4 (lower is better)
Translates to: EAGRKFDYSRRVCDHGSRCGVLS*FSVAGH
Trigger: ATGGCCTGCCACTGAAAATCAAGAAAGAACCCCACA...TCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CCTTGCTTGAATCTTTTAGCGAGCTATTCAGAGATTCTATATCCCCATTTACTCGGCAGAGCTGATTTCTaGACATGGACTGTGGGGTTC +
Preference number: 4 (lower is better)
Translates to: PCLNLLASYSEILYPHLLGRADF*TWTVGF
Trigger: GAACCCCACAGTCCATGTTCAGAAATCAGCTCTGCC...GAGTAAATGGGGATATAGAATCTCTGAATAGCTCGCTAAAAGATTCAAGCAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACGGCAGAGCTGATTTCTaGACATGGACTGTGGGGTTC +
Preference number: 4 (lower is better)
Translates to: RSVQKEMMDNISASTMSYGRADF*TWTVGF
Trigger: GAACCCCACAGTCCATGTTCAGAAATCAGCTCTGCC...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGGACTGCAGGCAGAGCTaGTTTCTGAACATGGACTGT +
Preference number: 4 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKDCRQS*FLNMDC
Trigger: ACAGTCCATGTTCAGAAATCAGCTCTGCCTGCAGTC...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp TATAAGAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAATCTGTTCTGCTGGGATaGGCCAGGAAGCCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: YKRQEGNLTIVEEYVTMESVLLG*ARKPSC
Trigger: GCAAGAAGGCTTCCTGGCTCATCCCAGCAGAACAGA...TTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTCTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCTGTTCTGCTGGGATaGGCCAGGAAGCCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: IYRSVQKEMMDNISASTMSVLLG*ARKPSC
Trigger: GCAAGAAGGCTTCCTGGCTCATCCCAGCAGAACAGA...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp GAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAGATTGAATCTGTTCTGCTGGGATaGGCCAGGAAGCCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: EGNLTIVEEYVTMEAEIESVLLG*ARKPSC
Trigger: GCAAGAAGGCTTCCTGGCTCATCCCAGCAGAACAGA...TTCAATCTCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp GAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAGATTGAACTGCCAGAGCTGAAGTaGTCCTCGCCGTTGGTATGT +
Preference number: 4 (lower is better)
Translates to: EGNLTIVEEYVTMEAEIELPELK*SSPLVC
Trigger: ACATACCAACGGCGAGGATCACTTCAGCTCTGGCAG...TTCAATCTCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGCTGCCAGAGCTGAAGTaGTCCTCGCCGTTGGTATGT +
Preference number: 4 (lower is better)
Translates to: IYRSVQKEMMDNISASTMLPELK*SSPLVC
Trigger: ACATACCAACGGCGAGGATCACTTCAGCTCTGGCAG...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp TATAAGAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAACTGCCAGAGCTGAAGTaGTCCTCGCCGTTGGTATGT +
Preference number: 4 (lower is better)
Translates to: YKRQEGNLTIVEEYVTMELPELK*SSPLVC
Trigger: ACATACCAACGGCGAGGATCACTTCAGCTCTGGCAG...TTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTCTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTCTGCCAGAGCTGAAGTaGTCCTCGCCGTTGGTATGT +
Preference number: 4 (lower is better)
Translates to: MDNISASTMSYSNFLIFFLPELK*SSPLVC
Trigger: ACATACCAACGGCGAGGATCACTTCAGCTCTGGCAG...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACAAAAACTGCCAGAGCTaGAGTGATCCTCGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: RSVQKEMMDNISASTMSYKNCQS*SDPRRW
Trigger: CCAACGGCGAGGATCACTTCAGCTCTGGCAGTTTTT...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CAGAATAAATGTTTAGATTACTCCCACCCACCCTCAAATAAAGTGCACAGTCCATTCAGCAGTGGACGCTaGTTATCTGGAAAGGCCATG +
Preference number: 4 (lower is better)
Translates to: QNKCLDYSHPPSNKVHSPFSSGR*LSGKAM
Trigger: CATGGCCTTTCCAGATAATCAGCGTCCACTGCTGAA...TGGACTGTGCACTTTATTTGAGGGTGGGTGGGAGTAATCTAAACATTTATTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACCTGTGTCCTCCTCGTTaGTGTGACGTTCCATGTCTG +
Preference number: 4 (lower is better)
Translates to: RSVQKEMMDNISASTMSYLCPPR*CDVPCL
Trigger: CAGACATGGAACGTCACATCAACGAGGAGGACACAG...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGAAGCAGAGATTGAAGTaGTGTAGCCAGGAGCCAAGG +
Preference number: 4 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKKQRLK*CSQEPR
Trigger: CCTTGGCTCCTGGCTACATCACTTCAATCTCTGCTT...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CAGAATAAATGTTTAGATTACTCCCACCCACCCTCAAATAAAGTGCACAGTCCACATGGAAGCAGAGATTaGAGTGATGTAGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: QNKCLDYSHPPSNKVHSPHGSRD*SDVARS
Trigger: GCTCCTGGCTACATCACTTCAATCTCTGCTTCCATG...TGGACTGTGCACTTTATTTGAGGGTGGGTGGGAGTAATCTAAACATTTATTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGGCCTCCAATCCAAACTaGTGGATCGCTGCCTCCCAT +
Preference number: 4 (lower is better)
Translates to: IYRSVQKEMMDNISASTMASNPN*WIAASH
Trigger: ATGGGAGGCAGCGATCCATCAGTTTGGATTGGAGGC...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405218.6
CDS-3UTR TCA 90 bp TTGAGTCATCTATTTTGTCCTGAAATGCTATCTGTAGTTAACTGCACTGCTTATAGCCGAAAGCGCCTCTaGCAGAGCTCAATTCGGTGG +
Preference number: 4 (lower is better)
Translates to: LSHLFCPEMLSVVNCTAYSRKRL*QSSIRW
Trigger: CCACCGAATTGAGCTCTGTCAGAGGCGCTTTCGGCT...ATAAGCAGTGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405218.6
CDS-3UTR GCA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGATCTCTGAAGCCACTTaGCCTGATCCTCCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKISEAT*PDPPSL
Trigger: CAGAGAAGGAGGATCAGGGCAAGTGGCTTCAGAGAT...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242066.9
CDS-3UTR GCA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGGGTCCATGGGGTAGCTaGTATCTGGTATGGACTGCG +
Preference number: 4 (lower is better)
Translates to: IYRSVQKEMMDNISASTMGPWGS*YLVWTA
Trigger: CGCAGTCCATACCAGATAGCAGCTACCCCATGGACC...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp TATAAGAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGGGTCGTGGTACTCCTaGTTAAAGCCTTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: YKRQEGNLTIVEEYVTMEGSWYS*LKPCGG
Trigger: CCCACCACAAGGCTTTAAGCAGGAGTACCACGACCC...TTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTCTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp GAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAGATTGAAGGGTCGTGGTACTCCTaGTTAAAGCCTTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: EGNLTIVEEYVTMEAEIEGSWYS*LKPCGG
Trigger: CCCACCACAAGGCTTTAAGCAGGAGTACCACGACCC...TTCAATCTCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACTTTGGCTGGCCGCACTaGCAACCATGGTGTTGTGTT +
Preference number: 4 (lower is better)
Translates to: RSVQKEMMDNISASTMSYFGWPH*QPWCCV
Trigger: AACACAACACCATGGTTGGCAGTGCGGCCAGCCAAA...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACTACAGCCTTCTGTTCTaGTGGGATGAGCCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: RSVQKEMMDNISASTMSYYSLLF*WDEPGS
Trigger: GCTTCCTGGCTCATCCCAGCAGAACAGAAGGCTGTA...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp CCTTGCTTGAATCTTTTAGCGAGCTATTCAGAGATTCTATATCCCCATTTACTCTACAGCCTTCTGTTCTaGTGGGATGAGCCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: PCLNLLASYSEILYPHLLYSLLF*WDEPGS
Trigger: GCTTCCTGGCTCATCCCAGCAGAACAGAAGGCTGTA...GAGTAAATGGGGATATAGAATCTCTGAATAGCTCGCTAAAAGATTCAAGCAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp GAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAAGCGCAAAAACGCCCTaGTTGACTGTCACTTGTGTT +
Preference number: 4 (lower is better)
Translates to: EAGRKFDYSRRVCDHGSRSAKTP*LTVTCV
Trigger: AACACAAGTGACAGTCAAGCAGGGCGTTTTTGCGCT...TCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTAGATGCATGATGCAGTaGGGACACTGGCGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: MDNISASTMSYSNFLIFFRCMMQ*GHWRAG
Trigger: TCCAGCACGCCAGTGTCCCCACTGCATCATGCATCT...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp GAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAGATTGAATGGTATGGACTGCGATaGAGGGAGGTGAGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: EGNLTIVEEYVTMEAEIEWYGLR*REVSWE
Trigger: TTCCCAGCTCACCTCCCTCCATCGCAGTCCATACCA...TTCAATCTCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242066.9
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTTGGTATGGACTGCGATaGAGGGAGGTGAGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: MDNISASTMSYSNFLIFFWYGLR*REVSWE
Trigger: TTCCCAGCTCACCTCCCTCCATCGCAGTCCATACCA...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CCTTGCTTGAATCTTTTAGCGAGCTATTCAGAGATTCTATATCCCCATTTACTCAGCTGCTATCTGGTATaGACTGCGATGGAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: PCLNLLASYSEILYPHLLSCYLV*TAMEGG
Trigger: ACCTCCCTCCATCGCAGTCCATACCAGATAGCAGCT...GAGTAAATGGGGATATAGAATCTCTGAATAGCTCGCTAAAAGATTCAAGCAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGGGGGTAGCTGCTATCTaGTATGGACTGCGATGGAGG +
Preference number: 4 (lower is better)
Translates to: IYRSVQKEMMDNISASTMGVAAI*YGLRWR
Trigger: CCTCCATCGCAGTCCATACCAGATAGCAGCTACCCC...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGCAGGGTTCAGAAAGCTaGCGGCGAAATCTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: IYRSVQKEMMDNISASTMQGSES*RRNLWS
Trigger: GGACCACAGATTTCGCCGCCAGCTTTCTGAACCCTG...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTCAGGGTTCAGAAAGCTaGCGGCGAAATCTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: MDNISASTMSYSNFLIFFQGSES*RRNLWS
Trigger: GGACCACAGATTTCGCCGCCAGCTTTCTGAACCCTG...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CTCATAAATGACAGGGGAAAATGCCCAAGGCAAATAGTCTCCAAGTGGATATTTTCAGACATCTGGCGTTaGTACATAGGACGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LINDRGKCPRQIVSKWIFSDIWR*YIGRPS
Trigger: GGAAGGACGTCCTATGTACCAACGCCAGATGTCTGA...AAATATCCACTTGGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATTTATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGTCAGACATCTGGCGTTaGTACATAGGACGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKSDIWR*YIGRPS
Trigger: GGAAGGACGTCCTATGTACCAACGCCAGATGTCTGA...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGCTTAAAGCCTTGTGGTaGGAAGGGGATGTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKLKALW*EGDVWL
Trigger: GAGCCAAACATCCCCTTCCCACCACAAGGCTTTAAG...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp GAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAGTTGTGTTCATACACTaGGTCGTGGTACTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: EAGRKFDYSRRVCDHGSRVVFIH*VVVLLL
Trigger: AAGCAGGAGTACCACGACCCAGTGTATGAACACAAC...TCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGCCGCACTGCCAACCATaGTGTTGTGTTCATACACTG +
Preference number: 4 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKPHCQP*CCVHTL
Trigger: CAGTGTATGAACACAACACCATGGTTGGCAGTGCGG...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CAGAATAAATGTTTAGATTACTCCCACCCACCCTCAAATAAAGTGCACAGTCCACCGCACTGCCAACCATaGTGTTGTGTTCATACACTG +
Preference number: 4 (lower is better)
Translates to: QNKCLDYSHPPSNKVHSPPHCQP*CCVHTL
Trigger: CAGTGTATGAACACAACACCATGGTTGGCAGTGCGG...TGGACTGTGCACTTTATTTGAGGGTGGGTGGGAGTAATCTAAACATTTATTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CCTTGCTTGAATCTTTTAGCGAGCTATTCAGAGATTCTATATCCCCATTTACTCCTCGCCGTTGGTATGTaGGTCCTTCCCGATACATTC +
Preference number: 4 (lower is better)
Translates to: PCLNLLASYSEILYPHLLLAVGM*VLPDTF
Trigger: GAATGTATCGGGAAGGACCCACATACCAACGGCGAG...GAGTAAATGGGGATATAGAATCTCTGAATAGCTCGCTAAAAGATTCAAGCAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGAGTGATCCTCGCCGTTaGTATGTGGGTCCTTCCCGA +
Preference number: 4 (lower is better)
Translates to: IYRSVQKEMMDNISASTMSDPRR*YVGPSR
Trigger: TCGGGAAGGACCCACATACCAACGGCGAGGATCACT...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CAAAGGGACTTGGCACACGTCATTAAGTTAAGGATCTTGAGATGGAGAGATTGTTCTAGAAGTGAAAGCTaGAAGAATCTCCCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: QRDLAHVIKLRILRWRDCSRSES*KNLPWS
Trigger: GCTCCAGGGGAGATTCTTCCAGCTTTCACTTCTAGA...ACAATCTCTCCATCTCAAGATCCTTAACTTAATGACGTGTGCCAAGTCCCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGATCGCTGCCTCCCATTaGCTCCGCGTCTCTTTCACA +
Preference number: 4 (lower is better)
Translates to: IYRSVQKEMMDNISASTMIAASH*LRVSFT
Trigger: TGTGAAAGAGACGCGGAGCCAATGGGAGGCAGCGAT...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405218.6
CDS-3UTR TCA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGTGTGGGGTTCTTTCTTaGTTTTCAGTGGCAGGCCAT +
Preference number: 4 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKCGVLS*FSVAGH
Trigger: ATGGCCTGCCACTGAAAATCAAGAAAGAACCCCACA...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTGGCAGAGCTGATTTCTaGACATGGACTGTGGGGTTC +
Preference number: 4 (lower is better)
Translates to: MDNISASTMSYSNFLIFFGRADF*TWTVGF
Trigger: GAACCCCACAGTCCATGTTCAGAAATCAGCTCTGCC...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGGGCAGAGCTGATTTCTaGACATGGACTGTGGGGTTC +
Preference number: 4 (lower is better)
Translates to: IYRSVQKEMMDNISASTMGRADF*TWTVGF
Trigger: GAACCCCACAGTCCATGTTCAGAAATCAGCTCTGCC...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACGACTGCAGGCAGAGCTaGTTTCTGAACATGGACTGT +
Preference number: 4 (lower is better)
Translates to: RSVQKEMMDNISASTMSYDCRQS*FLNMDC
Trigger: ACAGTCCATGTTCAGAAATCAGCTCTGCCTGCAGTC...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGTTAAAGGGCTGTTCTTaGCTGCAGGCAGAGCTGATT +
Preference number: 4 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKLKGCS*LQAELI
Trigger: AATCAGCTCTGCCTGCAGTCAAGAACAGCCCTTTAA...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CTCATAAATGACAGGGGAAAATGCCCAAGGCAAATAGTCTCCAAGTGGATATTTTTAAAGGGCTGTTCTTaGCTGCAGGCAGAGCTGATT +
Preference number: 4 (lower is better)
Translates to: LINDRGKCPRQIVSKWIFLKGCS*LQAELI
Trigger: AATCAGCTCTGCCTGCAGTCAAGAACAGCCCTTTAA...AAATATCCACTTGGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATTTATGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp TTGAGTCATCTATTTTGTCCTGAAATGCTATCTGTAGTTAACTGCACTGCTTATTCTGTTCTGCTGGGATaGGCCAGGAAGCCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: LSHLFCPEMLSVVNCTAYSVLLG*ARKPSC
Trigger: GCAAGAAGGCTTCCTGGCTCATCCCAGCAGAACAGA...ATAAGCAGTGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTCTGCCAGAGCTGAAGTaGTCCTCGCCGTTGGTATGT +
Preference number: 4 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISLPELK*SSPLVC
Trigger: ACATACCAACGGCGAGGATCACTTCAGCTCTGGCAG...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTAAAAACTGCCAGAGCTaGAGTGATCCTCGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: MDNISASTMSYSNFLIFFKNCQS*SDPRRW
Trigger: CCAACGGCGAGGATCACTTCAGCTCTGGCAGTTTTT...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACTTCAGCAGTGGACGCTaGTTATCTGGAAAGGCCATG +
Preference number: 4 (lower is better)
Translates to: RSVQKEMMDNISASTMSYFSSGR*LSGKAM
Trigger: CATGGCCTTTCCAGATAATCAGCGTCCACTGCTGAA...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACTCCTCCTCGTTGATGTaGCGTTCCATGTCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: RSVQKEMMDNISASTMSYSSSLM*RSMSVF
Trigger: GAAGACAGACATGGAACGTCACATCAACGAGGAGGA...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTCTGTGTCCTCCTCGTTaGTGTGACGTTCCATGTCTG +
Preference number: 4 (lower is better)
Translates to: MDNISASTMSYSNFLIFFLCPPR*CDVPCL
Trigger: CAGACATGGAACGTCACATCAACGAGGAGGACACAG...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CAGAATAAATGTTTAGATTACTCCCACCCACCCTCAAATAAAGTGCACAGTCCAATGCTCTCATCAAAGTaGGAAAGAGGCACTGTGTCC +
Preference number: 4 (lower is better)
Translates to: QNKCLDYSHPPSNKVHSPMLSSK*ERGTVS
Trigger: GGACACAGTGCCTCTTTCTCACTTTGATGAGAGCAT...TGGACTGTGCACTTTATTTGAGGGTGGGTGGGAGTAATCTAAACATTTATTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGATGCTCTCATCAAAGTaGGAAAGAGGCACTGTGTCC +
Preference number: 4 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKMLSSK*ERGTVS
Trigger: GGACACAGTGCCTCTTTCTCACTTTGATGAGAGCAT...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGGCAGAGACTCATAAATaGCAGGGGAAAATGCCCAAG +
Preference number: 4 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKAETHK*QGKMPK
Trigger: CTTGGGCATTTTCCCCTGTCATTTATGAGTCTCTGC...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CAGAATAAATGTTTAGATTACTCCCACCCACCCTCAAATAAAGTGCACAGTCCAGCAGAGACTCATAAATaGCAGGGGAAAATGCCCAAG +
Preference number: 4 (lower is better)
Translates to: QNKCLDYSHPPSNKVHSPAETHK*QGKMPK
Trigger: CTTGGGCATTTTCCCCTGTCATTTATGAGTCTCTGC...TGGACTGTGCACTTTATTTGAGGGTGGGTGGGAGTAATCTAAACATTTATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp TATAAGAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAAATGCTACTGGCCTATaGCTCAGTTTGGCGCCAGAG +
Preference number: 4 (lower is better)
Translates to: YKRQEGNLTIVEEYVTMENATGL*LSLAPE
Trigger: CTCTGGCGCCAAACTGAGTCATAGGCCAGTAGCATT...TTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTCTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CAAAGGGACTTGGCACACGTCATTAAGTTAAGGATCTTGAGATGGAGAGATTGTGATCCGCCCATGATTTaGGAAAAATGTTCTGCACTG +
Preference number: 4 (lower is better)
Translates to: QRDLAHVIKLRILRWRDCDPPMI*EKCSAL
Trigger: CAGTGCAGAACATTTTTCTCAAATCATGGGCGGATC...ACAATCTCTCCATCTCAAGATCCTTAACTTAATGACGTGTGCCAAGTCCCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CCTTGCTTGAATCTTTTAGCGAGCTATTCAGAGATTCTATATCCCCATTTACTCTTCAGTGGCAGGCCATaGAAAGCCAAACTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: PCLNLLASYSEILYPHLLFSGRP*KAKLSA
Trigger: GGCTGAAAGTTTGGCTTTTCATGGCCTGCCACTGAA...GAGTAAATGGGGATATAGAATCTCTGAATAGCTCGCTAAAAGATTCAAGCAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405358.8
ENST00000430479.6
CDS-3UTR TCA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACTTCAGTGGCAGGCCATaGAAAGCCAAACTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: RSVQKEMMDNISASTMSYFSGRP*KAKLSA
Trigger: GGCTGAAAGTTTGGCTTTTCATGGCCTGCCACTGAA...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000430479.6
CDS-3UTR TCA 90 bp TTGAGTCATCTATTTTGTCCTGAAATGCTATCTGTAGTTAACTGCACTGCTTATCCCAGCCAAAAACTTTaGGTGCAGCAGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LSHLFCPEMLSVVNCTAYPSQKL*VQQLLL
Trigger: CAGCAGCAGCTGCTGCACTCAAAGTTTTTGGCTGGG...ATAAGCAGTGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405358.8
CDS-3UTR GCA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGATCCATCCATGCTGCTaGTCTTCGCAAATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKIHPCC*SSQISA
Trigger: AGCTGAGATTTGCGAAGAGCAGCAGCATGGATGGAT...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000405192.6
ENST00000405218.6
ENST00000430479.6
CDS-3UTR GCA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTGGTCCATGGGGTAGCTaGTATCTGGTATGGACTGCG +
Preference number: 4 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISGPWGS*YLVWTA
Trigger: CGCAGTCCATACCAGATAGCAGCTACCCCATGGACC...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp TTGAGTCATCTATTTTGTCCTGAAATGCTATCTGTAGTTAACTGCACTGCTTATGGTCCATGGGGTAGCTaGTATCTGGTATGGACTGCG +
Preference number: 4 (lower is better)
Translates to: LSHLFCPEMLSVVNCTAYGPWGS*YLVWTA
Trigger: CGCAGTCCATACCAGATAGCAGCTACCCCATGGACC...ATAAGCAGTGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTGGTCCATGGGGTAGCTaGTATCTGGTATGGACTGCG +
Preference number: 4 (lower is better)
Translates to: VMVIIQLQRELPILWLSSGPWGS*YLVWTA
Trigger: CGCAGTCCATACCAGATAGCAGCTACCCCATGGACC...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTTTGGCTGGCCGCACTaGCAACCATGGTGTTGTGTT +
Preference number: 4 (lower is better)
Translates to: IYRSVQKEMMDNISASTMFGWPH*QPWCCV
Trigger: AACACAACACCATGGTTGGCAGTGCGGCCAGCCAAA...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp GAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAGATTGAATTTGGCTGGCCGCACTaGCAACCATGGTGTTGTGTT +
Preference number: 4 (lower is better)
Translates to: EGNLTIVEEYVTMEAEIEFGWPH*QPWCCV
Trigger: AACACAACACCATGGTTGGCAGTGCGGCCAGCCAAA...TTCAATCTCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTTACAGCCTTCTGTTCTaGTGGGATGAGCCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: MDNISASTMSYSNFLIFFYSLLF*WDEPGS
Trigger: GCTTCCTGGCTCATCCCAGCAGAACAGAAGGCTGTA...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp GAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAGATTGAATACAGCCTTCTGTTCTaGTGGGATGAGCCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: EGNLTIVEEYVTMEAEIEYSLLF*WDEPGS
Trigger: GCTTCCTGGCTCATCCCAGCAGAACAGAAGGCTGTA...TTCAATCTCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTGCCTGTTTTTCTGAATaGCCCAACGTCGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: VMVIIQLQRELPILWLSSACFSE*PNVGPP
Trigger: AGGTGGCCCGACGTTGGGGCATTCAGAAAAACAGGC...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTGCCTGTTTTTCTGAATaGCCCAACGTCGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISACFSE*PNVGPP
Trigger: AGGTGGCCCGACGTTGGGGCATTCAGAAAAACAGGC...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp CAGAATAAATGTTTAGATTACTCCCACCCACCCTCAAATAAAGTGCACAGTCCACCGGCATGTAGGCCATaGTCTCATCAAAGTGAGAAA +
Preference number: 4 (lower is better)
Translates to: QNKCLDYSHPPSNKVHSPPACRP*SHQSEK
Trigger: TTTCTCACTTTGATGAGAGCATGGCCTACATGCCGG...TGGACTGTGCACTTTATTTGAGGGTGGGTGGGAGTAATCTAAACATTTATTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGCCGGCATGTAGGCCATaGTCTCATCAAAGTGAGAAA +
Preference number: 4 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKPACRP*SHQSEK
Trigger: TTTCTCACTTTGATGAGAGCATGGCCTACATGCCGG...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp CAGAATAAATGTTTAGATTACTCCCACCCACCCTCAAATAAAGTGCACAGTCCACACCCTCAAATAAAGTaGACAGTCCATGGCAGACCA +
Preference number: 4 (lower is better)
Translates to: QNKCLDYSHPPSNKVHSPHPQIK*TVHGRP
Trigger: TGGTCTGCCATGGACTGTGCACTTTATTTGAGGGTG...TGGACTGTGCACTTTATTTGAGGGTGGGTGGGAGTAATCTAAACATTTATTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp CAAAGGGACTTGGCACACGTCATTAAGTTAAGGATCTTGAGATGGAGAGATTGTAATGACAGGGGAAAATaGCCAAGGCAAATAGTCTCC +
Preference number: 4 (lower is better)
Translates to: QRDLAHVIKLRILRWRDCNDRGK*PRQIVS
Trigger: GGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATT...ACAATCTCTCCATCTCAAGATCCTTAACTTAATGACGTGTGCCAAGTCCCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp TTGAGTCATCTATTTTGTCCTGAAATGCTATCTGTAGTTAACTGCACTGCTTATAAACTGATGGATCGCTaGCTCCCATTGGCTCCGCGT +
Preference number: 4 (lower is better)
Translates to: LSHLFCPEMLSVVNCTAYKLMDR*LPLAPR
Trigger: ACGCGGAGCCAATGGGAGGCAGCGATCCATCAGTTT...ATAAGCAGTGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405218.6
CDS-3UTR CCA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTAGATGCATGATGCAGTaGGGACACTGGCGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISRCMMQ*GHWRAG
Trigger: TCCAGCACGCCAGTGTCCCCACTGCATCATGCATCT...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp TATAAGAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAAGCTGCTATCTGGTATaGACTGCGATGGAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: YKRQEGNLTIVEEYVTMESCYLV*TAMEGG
Trigger: ACCTCCCTCCATCGCAGTCCATACCAGATAGCAGCT...TTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTCTTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242066.9
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTGGGGTAGCTGCTATCTaGTATGGACTGCGATGGAGG +
Preference number: 4 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISGVAAI*YGLRWR
Trigger: CCTCCATCGCAGTCCATACCAGATAGCAGCTACCCC...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp TTGAGTCATCTATTTTGTCCTGAAATGCTATCTGTAGTTAACTGCACTGCTTATGGGGTAGCTGCTATCTaGTATGGACTGCGATGGAGG +
Preference number: 4 (lower is better)
Translates to: LSHLFCPEMLSVVNCTAYGVAAI*YGLRWR
Trigger: CCTCCATCGCAGTCCATACCAGATAGCAGCTACCCC...ATAAGCAGTGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTGGGGTAGCTGCTATCTaGTATGGACTGCGATGGAGG +
Preference number: 4 (lower is better)
Translates to: VMVIIQLQRELPILWLSSGVAAI*YGLRWR
Trigger: CCTCCATCGCAGTCCATACCAGATAGCAGCTACCCC...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CAGAATAAATGTTTAGATTACTCCCACCCACCCTCAAATAAAGTGCACAGTCCAGAAATCTGTGGTCCATaGGGTAGCTGCTATCTGGTA +
Preference number: 4 (lower is better)
Translates to: QNKCLDYSHPPSNKVHSPEICGP*GSCYLV
Trigger: TACCAGATAGCAGCTACCCCATGGACCACAGATTTC...TGGACTGTGCACTTTATTTGAGGGTGGGTGGGAGTAATCTAAACATTTATTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTCAGGGTTCAGAAAGCTaGCGGCGAAATCTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: VMVIIQLQRELPILWLSSQGSES*RRNLWS
Trigger: GGACCACAGATTTCGCCGCCAGCTTTCTGAACCCTG...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CCTTGCTTGAATCTTTTAGCGAGCTATTCAGAGATTCTATATCCCCATTTACTCTCAGACATCTGGCGTTaGTACATAGGACGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: PCLNLLASYSEILYPHLLSDIWR*YIGRPS
Trigger: GGAAGGACGTCCTATGTACCAACGCCAGATGTCTGA...GAGTAAATGGGGATATAGAATCTCTGAATAGCTCGCTAAAAGATTCAAGCAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACTCAGACATCTGGCGTTaGTACATAGGACGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: RSVQKEMMDNISASTMSYSDIWR*YIGRPS
Trigger: GGAAGGACGTCCTATGTACCAACGCCAGATGTCTGA...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CAGAATAAATGTTTAGATTACTCCCACCCACCCTCAAATAAAGTGCACAGTCCATTTGGCTCAGACATCTaGCGTTGGTACATAGGACGT +
Preference number: 4 (lower is better)
Translates to: QNKCLDYSHPPSNKVHSPFGSDI*RWYIGR
Trigger: ACGTCCTATGTACCAACGCCAGATGTCTGAGCCAAA...TGGACTGTGCACTTTATTTGAGGGTGGGTGGGAGTAATCTAAACATTTATTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGTTTGGCTCAGACATCTaGCGTTGGTACATAGGACGT +
Preference number: 4 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKFGSDI*RWYIGR
Trigger: ACGTCCTATGTACCAACGCCAGATGTCTGAGCCAAA...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACCTTAAAGCCTTGTGGTaGGAAGGGGATGTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: RSVQKEMMDNISASTMSYLKALW*EGDVWL
Trigger: GAGCCAAACATCCCCTTCCCACCACAAGGCTTTAAG...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CCTTGCTTGAATCTTTTAGCGAGCTATTCAGAGATTCTATATCCCCATTTACTCCTTAAAGCCTTGTGGTaGGAAGGGGATGTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: PCLNLLASYSEILYPHLLLKALW*EGDVWL
Trigger: GAGCCAAACATCCCCTTCCCACCACAAGGCTTTAAG...GAGTAAATGGGGATATAGAATCTCTGAATAGCTCGCTAAAAGATTCAAGCAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACCTGCTTAAAGCCTTGTaGTGGGAAGGGGATGTTTGG +
Preference number: 4 (lower is better)
Translates to: RSVQKEMMDNISASTMSYLLKAL*WEGDVW
Trigger: CCAAACATCCCCTTCCCACCACAAGGCTTTAAGCAG...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CAGAATAAATGTTTAGATTACTCCCACCCACCCTCAAATAAAGTGCACAGTCCATCATACACTGGGTCGTaGTACTCCTGCTTAAAGCCT +
Preference number: 4 (lower is better)
Translates to: QNKCLDYSHPPSNKVHSPSYTGS*YSCLKP
Trigger: AGGCTTTAAGCAGGAGTACCACGACCCAGTGTATGA...TGGACTGTGCACTTTATTTGAGGGTGGGTGGGAGTAATCTAAACATTTATTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CTCATAAATGACAGGGGAAAATGCCCAAGGCAAATAGTCTCCAAGTGGATATTTTCATACACTGGGTCGTaGTACTCCTGCTTAAAGCCT +
Preference number: 4 (lower is better)
Translates to: LINDRGKCPRQIVSKWIFSYTGS*YSCLKP
Trigger: AGGCTTTAAGCAGGAGTACCACGACCCAGTGTATGA...AAATATCCACTTGGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATTTATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGTCATACACTGGGTCGTaGTACTCCTGCTTAAAGCCT +
Preference number: 4 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKSYTGS*YSCLKP
Trigger: AGGCTTTAAGCAGGAGTACCACGACCCAGTGTATGA...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGGTTGTGTTCATACACTaGGTCGTGGTACTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKVVFIH*VVVLLL
Trigger: AAGCAGGAGTACCACGACCCAGTGTATGAACACAAC...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CCTTGCTTGAATCTTTTAGCGAGCTATTCAGAGATTCTATATCCCCATTTACTCCCGCACTGCCAACCATaGTGTTGTGTTCATACACTG +
Preference number: 4 (lower is better)
Translates to: PCLNLLASYSEILYPHLLPHCQP*CCVHTL
Trigger: CAGTGTATGAACACAACACCATGGTTGGCAGTGCGG...GAGTAAATGGGGATATAGAATCTCTGAATAGCTCGCTAAAAGATTCAAGCAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp GAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGATTCCCGATACATTCCTaGCTCTTGTTTGATGTCTCC +
Preference number: 4 (lower is better)
Translates to: EAGRKFDYSRRVCDHGSRFPIHS*LLFDVS
Trigger: GGAGACATCAAACAAGAGCCAGGAATGTATCGGGAA...TCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTAGTGATCCTCGCCGTTaGTATGTGGGTCCTTCCCGA +
Preference number: 4 (lower is better)
Translates to: VMVIIQLQRELPILWLSSSDPRR*YVGPSR
Trigger: TCGGGAAGGACCCACATACCAACGGCGAGGATCACT...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp GAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAGGACTTCTATCAACCTaGATCCAAAGAGAGCCAACA +
Preference number: 4 (lower is better)
Translates to: EAGRKFDYSRRVCDHGSRGLLST*IQREPT
Trigger: TGTTGGCTCTCTTTGGATCCAGGTTGATAGAAGTCC...TCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430479.6
3UTR CAA 72 bp CAAAGGGACTTGGCACACGTCATTAAGTTAAGGATCTaGAGATGGAGAGATTGTCCTGGATTATCTGAGCAT +
Preference number: 4 (lower is better)
Translates to: QRDLAHVIKLRI*RWRDCPGLSEH
Trigger: ATGCTCAGATAATCCAGGACAATCTCTCCATCTCAAGATCCTTAACTTAATGACGTGTGCCAAGTCCCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTGGCAGAGCTGATTTCTaGACATGGACTGTGGGGTTC +
Preference number: 4 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISGRADF*TWTVGF
Trigger: GAACCCCACAGTCCATGTTCAGAAATCAGCTCTGCC...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp TTGAGTCATCTATTTTGTCCTGAAATGCTATCTGTAGTTAACTGCACTGCTTATGGCAGAGCTGATTTCTaGACATGGACTGTGGGGTTC +
Preference number: 4 (lower is better)
Translates to: LSHLFCPEMLSVVNCTAYGRADF*TWTVGF
Trigger: GAACCCCACAGTCCATGTTCAGAAATCAGCTCTGCC...ATAAGCAGTGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTGACTGCAGGCAGAGCTaGTTTCTGAACATGGACTGT +
Preference number: 4 (lower is better)
Translates to: MDNISASTMSYSNFLIFFDCRQS*FLNMDC
Trigger: ACAGTCCATGTTCAGAAATCAGCTCTGCCTGCAGTC...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGGACTGCAGGCAGAGCTaGTTTCTGAACATGGACTGT +
Preference number: 4 (lower is better)
Translates to: IYRSVQKEMMDNISASTMDCRQS*FLNMDC
Trigger: ACAGTCCATGTTCAGAAATCAGCTCTGCCTGCAGTC...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CCTTGCTTGAATCTTTTAGCGAGCTATTCAGAGATTCTATATCCCCATTTACTCTTAAAGGGCTGTTCTTaGCTGCAGGCAGAGCTGATT +
Preference number: 4 (lower is better)
Translates to: PCLNLLASYSEILYPHLLLKGCS*LQAELI
Trigger: AATCAGCTCTGCCTGCAGTCAAGAACAGCCCTTTAA...GAGTAAATGGGGATATAGAATCTCTGAATAGCTCGCTAAAAGATTCAAGCAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACTTAAAGGGCTGTTCTTaGCTGCAGGCAGAGCTGATT +
Preference number: 4 (lower is better)
Translates to: RSVQKEMMDNISASTMSYLKGCS*LQAELI
Trigger: AATCAGCTCTGCCTGCAGTCAAGAACAGCCCTTTAA...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp GAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGATTTCGGTGTATGAGTTaGGTTTGGAGATGCATGATG +
Preference number: 4 (lower is better)
Translates to: EAGRKFDYSRRVCDHGSRFRCMS*VWRCMM
Trigger: CATCATGCATCTCCAAACTCAACTCATACACCGAAA...TCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242066.9
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CTCATAAATGACAGGGGAAAATGCCCAAGGCAAATAGTCTCCAAGTGGATATTTTCAGGTTTCGGTGTATaGGTTGAGTTTGGAGATGCA +
Preference number: 4 (lower is better)
Translates to: LINDRGKCPRQIVSKWIFSGFGV*VEFGDA
Trigger: TGCATCTCCAAACTCAACTCATACACCGAAACCTGA...AAATATCCACTTGGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATTTATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGTCAGGTTTCGGTGTATaGGTTGAGTTTGGAGATGCA +
Preference number: 4 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKSGFGV*VEFGDA
Trigger: TGCATCTCCAAACTCAACTCATACACCGAAACCTGA...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTAAAAACTGCCAGAGCTaGAGTGATCCTCGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: VMVIIQLQRELPILWLSSKNCQS*SDPRRW
Trigger: CCAACGGCGAGGATCACTTCAGCTCTGGCAGTTTTT...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp TTGAGTCATCTATTTTGTCCTGAAATGCTATCTGTAGTTAACTGCACTGCTTATAAAAACTGCCAGAGCTaGAGTGATCCTCGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: LSHLFCPEMLSVVNCTAYKNCQS*SDPRRW
Trigger: CCAACGGCGAGGATCACTTCAGCTCTGGCAGTTTTT...ATAAGCAGTGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTAAAAACTGCCAGAGCTaGAGTGATCCTCGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISKNCQS*SDPRRW
Trigger: CCAACGGCGAGGATCACTTCAGCTCTGGCAGTTTTT...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp GAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAGATTGAATTCAGCAGTGGACGCTaGTTATCTGGAAAGGCCATG +
Preference number: 4 (lower is better)
Translates to: EGNLTIVEEYVTMEAEIEFSSGR*LSGKAM
Trigger: CATGGCCTTTCCAGATAATCAGCGTCCACTGCTGAA...TTCAATCTCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTTCAGCAGTGGACGCTaGTTATCTGGAAAGGCCATG +
Preference number: 4 (lower is better)
Translates to: IYRSVQKEMMDNISASTMFSSGR*LSGKAM
Trigger: CATGGCCTTTCCAGATAATCAGCGTCCACTGCTGAA...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp TATAAGAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAATCCTCCTCGTTGATGTaGCGTTCCATGTCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: YKRQEGNLTIVEEYVTMESSSLM*RSMSVF
Trigger: GAAGACAGACATGGAACGTCACATCAACGAGGAGGA...TTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTCTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCCTCCTCGTTGATGTaGCGTTCCATGTCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: IYRSVQKEMMDNISASTMSSSLM*RSMSVF
Trigger: GAAGACAGACATGGAACGTCACATCAACGAGGAGGA...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp GAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAGATTGAATCCTCCTCGTTGATGTaGCGTTCCATGTCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: EGNLTIVEEYVTMEAEIESSSLM*RSMSVF
Trigger: GAAGACAGACATGGAACGTCACATCAACGAGGAGGA...TTCAATCTCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTCTGTGTCCTCCTCGTTaGTGTGACGTTCCATGTCTG +
Preference number: 4 (lower is better)
Translates to: VMVIIQLQRELPILWLSSLCPPR*CDVPCL
Trigger: CAGACATGGAACGTCACATCAACGAGGAGGACACAG...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp TTGAGTCATCTATTTTGTCCTGAAATGCTATCTGTAGTTAACTGCACTGCTTATCTGTGTCCTCCTCGTTaGTGTGACGTTCCATGTCTG +
Preference number: 4 (lower is better)
Translates to: LSHLFCPEMLSVVNCTAYLCPPR*CDVPCL
Trigger: CAGACATGGAACGTCACATCAACGAGGAGGACACAG...ATAAGCAGTGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTAATGCTACTGGCCTATaGCTCAGTTTGGCGCCAGAG +
Preference number: 4 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISNATGL*LSLAPE
Trigger: CTCTGGCGCCAAACTGAGTCATAGGCCAGTAGCATT...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGGATCCGCCCATGATTTaGGAAAAATGTTCTGCACTG +
Preference number: 4 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKDPPMI*EKCSAL
Trigger: CAGTGCAGAACATTTTTCTCAAATCATGGGCGGATC...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CAAAGGGACTTGGCACACGTCATTAAGTTAAGGATCTTGAGATGGAGAGATTGTTCCAAGATCCGCCCATaGTTTGAGAAAAATGTTCTG +
Preference number: 4 (lower is better)
Translates to: QRDLAHVIKLRILRWRDCSKIRP*FEKNVL
Trigger: CAGAACATTTTTCTCAAATCATGGGCGGATCTTGGA...ACAATCTCTCCATCTCAAGATCCTTAACTTAATGACGTGTGCCAAGTCCCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp TATAAGAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAAAGCAGAGATTGAAGTaGTGTAGCCAGGAGCCAAGG +
Preference number: 4 (lower is better)
Translates to: YKRQEGNLTIVEEYVTMEKQRLK*CSQEPR
Trigger: CCTTGGCTCCTGGCTACATCACTTCAATCTCTGCTT...TTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTCTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp TATAAGAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAACATGGAAGCAGAGATTaGAGTGATGTAGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: YKRQEGNLTIVEEYVTMEHGSRD*SDVARS
Trigger: GCTCCTGGCTACATCACTTCAATCTCTGCTTCCATG...TTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTCTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGCATGGAAGCAGAGATTaGAGTGATGTAGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: IYRSVQKEMMDNISASTMHGSRD*SDVARS
Trigger: GCTCCTGGCTACATCACTTCAATCTCTGCTTCCATG...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp GAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAGATTGAACATGGAAGCAGAGATTaGAGTGATGTAGCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: EGNLTIVEEYVTMEAEIEHGSRD*SDVARS
Trigger: GCTCCTGGCTACATCACTTCAATCTCTGCTTCCATG...TTCAATCTCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp TATAAGAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAATTCAGTGGCAGGCCATaGAAAGCCAAACTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: YKRQEGNLTIVEEYVTMEFSGRP*KAKLSA
Trigger: GGCTGAAAGTTTGGCTTTTCATGGCCTGCCACTGAA...TTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTCTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399357.7
ENST00000430479.6
CDS-3UTR TCA 90 bp GAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAGATTGAAGCTGGCGGCGAAATCTaGCATTGTACAGGCACTTTT +
Preference number: 4 (lower is better)
Translates to: EGNLTIVEEYVTMEAEIEAGGEI*HCTGTF
Trigger: AAAAGTGCCTGTACAATGTCAGATTTCGCCGCCAGC...TTCAATCTCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399357.7
CDS-3UTR TCA 90 bp GAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAGATTGAATTCAGTGGCAGGCCATaGAAAGCCACTAACGTTCTG +
Preference number: 4 (lower is better)
Translates to: EGNLTIVEEYVTMEAEIEFSGRP*KATNVL
Trigger: CAGAACGTTAGTGGCTTTTCATGGCCTGCCACTGAA...TTCAATCTCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420159.6
CDS-3UTR GCA 90 bp CAAAGGGACTTGGCACACGTCATTAAGTTAAGGATCTTGAGATGGAGAGATTGTAAAATCCATCCATGCTaGTGCTCTTCGCAAATCTCA +
Preference number: 4 (lower is better)
Translates to: QRDLAHVIKLRILRWRDCKIHPC*CSSQIS
Trigger: TGAGATTTGCGAAGAGCAGCAGCATGGATGGATTTT...ACAATCTCTCCATCTCAAGATCCTTAACTTAATGACGTGTGCCAAGTCCCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242066.9
ENST00000430479.6
CDS-3UTR GCA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTTTTGGCTGGCCGCACTaGCAACCATGGTGTTGTGTT +
Preference number: 4 (lower is better)
Translates to: VMVIIQLQRELPILWLSSFGWPH*QPWCCV
Trigger: AACACAACACCATGGTTGGCAGTGCGGCCAGCCAAA...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp TTGAGTCATCTATTTTGTCCTGAAATGCTATCTGTAGTTAACTGCACTGCTTATTTTGGCTGGCCGCACTaGCAACCATGGTGTTGTGTT +
Preference number: 4 (lower is better)
Translates to: LSHLFCPEMLSVVNCTAYFGWPH*QPWCCV
Trigger: AACACAACACCATGGTTGGCAGTGCGGCCAGCCAAA...ATAAGCAGTGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp TTGAGTCATCTATTTTGTCCTGAAATGCTATCTGTAGTTAACTGCACTGCTTATTACAGCCTTCTGTTCTaGTGGGATGAGCCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: LSHLFCPEMLSVVNCTAYYSLLF*WDEPGS
Trigger: GCTTCCTGGCTCATCCCAGCAGAACAGAAGGCTGTA...ATAAGCAGTGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACAGCGCAAAAACGCCCTaGTTGACTGTCACTTGTGTT +
Preference number: 4 (lower is better)
Translates to: RSVQKEMMDNISASTMSYSAKTP*LTVTCV
Trigger: AACACAAGTGACAGTCAAGCAGGGCGTTTTTGCGCT...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACCACCCTCAAATAAAGTaGACAGTCCATGGCAGACCA +
Preference number: 4 (lower is better)
Translates to: RSVQKEMMDNISASTMSYHPQIK*TVHGRP
Trigger: TGGTCTGCCATGGACTGTGCACTTTATTTGAGGGTG...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp CTCATAAATGACAGGGGAAAATGCCCAAGGCAAATAGTCTCCAAGTGGATATTTAATGACAGGGGAAAATaGCCAAGGCAAATAGTCTCC +
Preference number: 4 (lower is better)
Translates to: LINDRGKCPRQIVSKWIFNDRGK*PRQIVS
Trigger: GGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATT...AAATATCCACTTGGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATTTATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp TATAAGAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAAGTCTTCCTCCTCCGTaGGGTGTTCTGAATAACAGC +
Preference number: 4 (lower is better)
Translates to: YKRQEGNLTIVEEYVTMESLPPP*GVLNNS
Trigger: GCTGTTATTCAGAACACCGCACGGAGGAGGAAGACT...TTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTCTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCCTCTGTAACCCGCTaGTTATTGTTAAGGCGCCTG +
Preference number: 4 (lower is better)
Translates to: IYRSVQKEMMDNISASTMSSVTR*LLLRRL
Trigger: CAGGCGCCTTAACAATAAGCAGCGGGTTACAGAGGA...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405218.6
CDS-3UTR CCA 90 bp CAAAGGGACTTGGCACACGTCATTAAGTTAAGGATCTTGAGATGGAGAGATTGTTTTCTTGATTTTCAGTaGCAGGCCATGAAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: QRDLAHVIKLRILRWRDCFLDFQ*QAMKSH
Trigger: GTGGCTTTTCATGGCCTGCCACTGAAAATCAAGAAA...ACAATCTCTCCATCTCAAGATCCTTAACTTAATGACGTGTGCCAAGTCCCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000242066.9
ENST00000420159.6
CDS-3UTR CCA 90 bp TTGAGTCATCTATTTTGTCCTGAAATGCTATCTGTAGTTAACTGCACTGCTTATAGCTGCTATCTGGTATaGACTGCGATGGAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: LSHLFCPEMLSVVNCTAYSCYLV*TAMEGG
Trigger: ACCTCCCTCCATCGCAGTCCATACCAGATAGCAGCT...ATAAGCAGTGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTAGCTGCTATCTGGTATaGACTGCGATGGAGGGAGGT +
Preference number: 4 (lower is better)
Translates to: VMVIIQLQRELPILWLSSSCYLV*TAMEGG
Trigger: ACCTCCCTCCATCGCAGTCCATACCAGATAGCAGCT...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CCTTGCTTGAATCTTTTAGCGAGCTATTCAGAGATTCTATATCCCCATTTACTCGAAATCTGTGGTCCATaGGGTAGCTGCTATCTGGTA +
Preference number: 4 (lower is better)
Translates to: PCLNLLASYSEILYPHLLEICGP*GSCYLV
Trigger: TACCAGATAGCAGCTACCCCATGGACCACAGATTTC...GAGTAAATGGGGATATAGAATCTCTGAATAGCTCGCTAAAAGATTCAAGCAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTTCAGACATCTGGCGTTaGTACATAGGACGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: MDNISASTMSYSNFLIFFSDIWR*YIGRPS
Trigger: GGAAGGACGTCCTATGTACCAACGCCAGATGTCTGA...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGCTTAAAGCCTTGTGGTaGGAAGGGGATGTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: IYRSVQKEMMDNISASTMLKALW*EGDVWL
Trigger: GAGCCAAACATCCCCTTCCCACCACAAGGCTTTAAG...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp GAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAGATTGAACTTAAAGCCTTGTGGTaGGAAGGGGATGTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: EGNLTIVEEYVTMEAEIELKALW*EGDVWL
Trigger: GAGCCAAACATCCCCTTCCCACCACAAGGCTTTAAG...TTCAATCTCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp GAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAGATTGAACTGCTTAAAGCCTTGTaGTGGGAAGGGGATGTTTGG +
Preference number: 4 (lower is better)
Translates to: EGNLTIVEEYVTMEAEIELLKAL*WEGDVW
Trigger: CCAAACATCCCCTTCCCACCACAAGGCTTTAAGCAG...TTCAATCTCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp TATAAGAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAACTGCTTAAAGCCTTGTaGTGGGAAGGGGATGTTTGG +
Preference number: 4 (lower is better)
Translates to: YKRQEGNLTIVEEYVTMELLKAL*WEGDVW
Trigger: CCAAACATCCCCTTCCCACCACAAGGCTTTAAGCAG...TTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTCTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTCTGCTTAAAGCCTTGTaGTGGGAAGGGGATGTTTGG +
Preference number: 4 (lower is better)
Translates to: MDNISASTMSYSNFLIFFLLKAL*WEGDVW
Trigger: CCAAACATCCCCTTCCCACCACAAGGCTTTAAGCAG...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGCTGCTTAAAGCCTTGTaGTGGGAAGGGGATGTTTGG +
Preference number: 4 (lower is better)
Translates to: IYRSVQKEMMDNISASTMLLKAL*WEGDVW
Trigger: CCAAACATCCCCTTCCCACCACAAGGCTTTAAGCAG...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CCTTGCTTGAATCTTTTAGCGAGCTATTCAGAGATTCTATATCCCCATTTACTCGTTGTGTTCATACACTaGGTCGTGGTACTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: PCLNLLASYSEILYPHLLVVFIH*VVVLLL
Trigger: AAGCAGGAGTACCACGACCCAGTGTATGAACACAAC...GAGTAAATGGGGATATAGAATCTCTGAATAGCTCGCTAAAAGATTCAAGCAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACGTTGTGTTCATACACTaGGTCGTGGTACTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: RSVQKEMMDNISASTMSYVVFIH*VVVLLL
Trigger: AAGCAGGAGTACCACGACCCAGTGTATGAACACAAC...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGCCGCACTGCCAACCATaGTGTTGTGTTCATACACTG +
Preference number: 4 (lower is better)
Translates to: IYRSVQKEMMDNISASTMPHCQP*CCVHTL
Trigger: CAGTGTATGAACACAACACCATGGTTGGCAGTGCGG...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTCTCGCCGTTGGTATGTaGGTCCTTCCCGATACATTC +
Preference number: 4 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISLAVGM*VLPDTF
Trigger: GAATGTATCGGGAAGGACCCACATACCAACGGCGAG...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGTATCTGGAAAGGCCATaGAGAAAAGGGCTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKYLERP*RKGLLD
Trigger: ATCCAGAAGCCCTTTTCTCCATGGCCTTTCCAGATA...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CTCATAAATGACAGGGGAAAATGCCCAAGGCAAATAGTCTCCAAGTGGATATTTGTGATAACGTTAGCATaGCCCAATTCTTCCTCACTG +
Preference number: 4 (lower is better)
Translates to: LINDRGKCPRQIVSKWIFVITLA*PNSSSL
Trigger: CAGTGAGGAAGAATTGGGCCATGCTAACGTTATCAC...AAATATCCACTTGGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATTTATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGGTGATAACGTTAGCATaGCCCAATTCTTCCTCACTG +
Preference number: 4 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKVITLA*PNSSSL
Trigger: CAGTGAGGAAGAATTGGGCCATGCTAACGTTATCAC...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp TATAAGAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAACAGGGTTCAGAAAGCTaGCGGCGAAATCTGACATTG +
Preference number: 4 (lower is better)
Translates to: YKRQEGNLTIVEEYVTMEQGSES*RRNLTL
Trigger: CAATGTCAGATTTCGCCGCCAGCTTTCTGAACCCTG...TTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTCTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399357.7
CDS-3UTR CCA 90 bp CAAAGGGACTTGGCACACGTCATTAAGTTAAGGATCTTGAGATGGAGAGATTGTGATTTCCTCAGGATCTaGACTTCTATCAACCTGGAT +
Preference number: 4 (lower is better)
Translates to: QRDLAHVIKLRILRWRDCDFLRI*TSINLD
Trigger: ATCCAGGTTGATAGAAGTCCAGATCCTGAGGAAATC...ACAATCTCTCCATCTCAAGATCCTTAACTTAATGACGTGTGCCAAGTCCCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430479.6
CDS-3UTR TCA 90 bp GAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAAGTTCTTCTGAATCATaGGCCAGATCTCTGTTAATG +
Preference number: 4 (lower is better)
Translates to: EAGRKFDYSRRVCDHGSRSSSES*ARSLLM
Trigger: CATTAACAGAGATCTGGCTCATGATTCAGAAGAACT...TCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242066.9
ENST00000430479.6
CDS-3UTR TCA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTTGTGGGGTTCTTTCTTaGTTTTCAGTGGCAGGCCAT +
Preference number: 4 (lower is better)
Translates to: MDNISASTMSYSNFLIFFCGVLS*FSVAGH
Trigger: ATGGCCTGCCACTGAAAATCAAGAAAGAACCCCACA...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTGTGGGGTTCTTTCTTaGTTTTCAGTGGCAGGCCAT +
Preference number: 4 (lower is better)
Translates to: IYRSVQKEMMDNISASTMCGVLS*FSVAGH
Trigger: ATGGCCTGCCACTGAAAATCAAGAAAGAACCCCACA...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp TATAAGAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAATGTGGGGTTCTTTCTTaGTTTTCAGTGGCAGGCCAT +
Preference number: 4 (lower is better)
Translates to: YKRQEGNLTIVEEYVTMECGVLS*FSVAGH
Trigger: ATGGCCTGCCACTGAAAATCAAGAAAGAACCCCACA...TTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTCTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTGACTGCAGGCAGAGCTaGTTTCTGAACATGGACTGT +
Preference number: 4 (lower is better)
Translates to: VMVIIQLQRELPILWLSSDCRQS*FLNMDC
Trigger: ACAGTCCATGTTCAGAAATCAGCTCTGCCTGCAGTC...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTTAAAGGGCTGTTCTTaGCTGCAGGCAGAGCTGATT +
Preference number: 4 (lower is better)
Translates to: IYRSVQKEMMDNISASTMLKGCS*LQAELI
Trigger: AATCAGCTCTGCCTGCAGTCAAGAACAGCCCTTTAA...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp GAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAGATTGAATTAAAGGGCTGTTCTTaGCTGCAGGCAGAGCTGATT +
Preference number: 4 (lower is better)
Translates to: EGNLTIVEEYVTMEAEIELKGCS*LQAELI
Trigger: AATCAGCTCTGCCTGCAGTCAAGAACAGCCCTTTAA...TTCAATCTCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CAGAATAAATGTTTAGATTACTCCCACCCACCCTCAAATAAAGTGCACAGTCCATTTCGGTGTATGAGTTaGGTTTGGAGATGCATGATG +
Preference number: 4 (lower is better)
Translates to: QNKCLDYSHPPSNKVHSPFRCMS*VWRCMM
Trigger: CATCATGCATCTCCAAACTCAACTCATACACCGAAA...TGGACTGTGCACTTTATTTGAGGGTGGGTGGGAGTAATCTAAACATTTATTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CTCATAAATGACAGGGGAAAATGCCCAAGGCAAATAGTCTCCAAGTGGATATTTTTTCGGTGTATGAGTTaGGTTTGGAGATGCATGATG +
Preference number: 4 (lower is better)
Translates to: LINDRGKCPRQIVSKWIFFRCMS*VWRCMM
Trigger: CATCATGCATCTCCAAACTCAACTCATACACCGAAA...AAATATCCACTTGGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATTTATGAG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACTCAGGTTTCGGTGTATaGGTTGAGTTTGGAGATGCA +
Preference number: 4 (lower is better)
Translates to: RSVQKEMMDNISASTMSYSGFGV*VEFGDA
Trigger: TGCATCTCCAAACTCAACTCATACACCGAAACCTGA...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp GAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGATTCCTGGCTCTTGTTTaGTGTCTCCATCGAATTTTT +
Preference number: 4 (lower is better)
Translates to: EAGRKFDYSRRVCDHGSRFLALV*CLHRIF
Trigger: AAAAATTCGATGGAGACATCAAACAAGAGCCAGGAA...TCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CAAAGGGACTTGGCACACGTCATTAAGTTAAGGATCTTGAGATGGAGAGATTGTTTCCTGGCTCTTGTTTaGTGTCTCCATCGAATTTTT +
Preference number: 4 (lower is better)
Translates to: QRDLAHVIKLRILRWRDCFLALV*CLHRIF
Trigger: AAAAATTCGATGGAGACATCAAACAAGAGCCAGGAA...ACAATCTCTCCATCTCAAGATCCTTAACTTAATGACGTGTGCCAAGTCCCTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp TTGAGTCATCTATTTTGTCCTGAAATGCTATCTGTAGTTAACTGCACTGCTTATTTCAGCAGTGGACGCTaGTTATCTGGAAAGGCCATG +
Preference number: 4 (lower is better)
Translates to: LSHLFCPEMLSVVNCTAYFSSGR*LSGKAM
Trigger: CATGGCCTTTCCAGATAATCAGCGTCCACTGCTGAA...ATAAGCAGTGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp TTGAGTCATCTATTTTGTCCTGAAATGCTATCTGTAGTTAACTGCACTGCTTATTCCTCCTCGTTGATGTaGCGTTCCATGTCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: LSHLFCPEMLSVVNCTAYSSSLM*RSMSVF
Trigger: GAAGACAGACATGGAACGTCACATCAACGAGGAGGA...ATAAGCAGTGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTTCCTCCTCGTTGATGTaGCGTTCCATGTCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: VMVIIQLQRELPILWLSSSSSLM*RSMSVF
Trigger: GAAGACAGACATGGAACGTCACATCAACGAGGAGGA...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTATGCTCTCATCAAAGTaGGAAAGAGGCACTGTGTCC +
Preference number: 4 (lower is better)
Translates to: MDNISASTMSYSNFLIFFMLSSK*ERGTVS
Trigger: GGACACAGTGCCTCTTTCTCACTTTGATGAGAGCAT...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGCAAAAACGCCCTGCTTaGCTGTCACTTGTGTTAATA +
Preference number: 4 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKQKRPA*LSLVLI
Trigger: TATTAACACAAGTGACAGTCAAGCAGGGCGTTTTTG...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGGCAGAGACTCATAAATaGCAGGGGAAAATGCCCAAG +
Preference number: 4 (lower is better)
Translates to: IYRSVQKEMMDNISASTMAETHK*QGKMPK
Trigger: CTTGGGCATTTTCCCCTGTCATTTATGAGTCTCTGC...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTGCAGAGACTCATAAATaGCAGGGGAAAATGCCCAAG +
Preference number: 4 (lower is better)
Translates to: MDNISASTMSYSNFLIFFAETHK*QGKMPK
Trigger: CTTGGGCATTTTCCCCTGTCATTTATGAGTCTCTGC...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CAAAGGGACTTGGCACACGTCATTAAGTTAAGGATCTTGAGATGGAGAGATTGTGTGTCCAAAAAGAGATaGTGGATAATATCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: QRDLAHVIKLRILRWRDCVSKKR*WIISVP
Trigger: TGGCACTGATATTATCCATCATCTCTTTTTGGACAC...ACAATCTCTCCATCTCAAGATCCTTAACTTAATGACGTGTGCCAAGTCCCTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CTCATAAATGACAGGGGAAAATGCCCAAGGCAAATAGTCTCCAAGTGGATATTTCTCCACTTAGAGAAATaGGCTGTGATCTGTGTAGTT +
Preference number: 4 (lower is better)
Translates to: LINDRGKCPRQIVSKWIFLHLEK*AVICVV
Trigger: AACTACACAGATCACAGCTCATTTCTCTAAGTGGAG...AAATATCCACTTGGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATTTATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CAAAGGGACTTGGCACACGTCATTAAGTTAAGGATCTTGAGATGGAGAGATTGTCCAATTCTTCCTCACTaGCTGACTAAAACTAGACTA +
Preference number: 4 (lower is better)
Translates to: QRDLAHVIKLRILRWRDCPILPH*LTKTRL
Trigger: TAGTCTAGTTTTAGTCAGTCAGTGAGGAAGAATTGG...ACAATCTCTCCATCTCAAGATCCTTAACTTAATGACGTGTGCCAAGTCCCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CAGAATAAATGTTTAGATTACTCCCACCCACCCTCAAATAAAGTGCACAGTCCATCCAAGATCCGCCCATaGTTTGAGAAAAATGTTCTG +
Preference number: 4 (lower is better)
Translates to: QNKCLDYSHPPSNKVHSPSKIRP*FEKNVL
Trigger: CAGAACATTTTTCTCAAATCATGGGCGGATCTTGGA...TGGACTGTGCACTTTATTTGAGGGTGGGTGGGAGTAATCTAAACATTTATTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTAAGCAGAGATTGAAGTaGTGTAGCCAGGAGCCAAGG +
Preference number: 4 (lower is better)
Translates to: VMVIIQLQRELPILWLSSKQRLK*CSQEPR
Trigger: CCTTGGCTCCTGGCTACATCACTTCAATCTCTGCTT...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTAAGCAGAGATTGAAGTaGTGTAGCCAGGAGCCAAGG +
Preference number: 4 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISKQRLK*CSQEPR
Trigger: CCTTGGCTCCTGGCTACATCACTTCAATCTCTGCTT...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGTCTCATTACAAGCTCTaGAAAGGCTGCATGATAGAC +
Preference number: 4 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKSHYKL*KGCMID
Trigger: GTCTATCATGCAGCCTTTTCAGAGCTTGTAATGAGA...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CAGAATAAATGTTTAGATTACTCCCACCCACCCTCAAATAAAGTGCACAGTCCACAGAGGCTTAGAACTTaGAGTCTTGGTGCATTAGTT +
Preference number: 4 (lower is better)
Translates to: QNKCLDYSHPPSNKVHSPQRLRT*SLGALV
Trigger: AACTAATGCACCAAGACTTCAAGTTCTAAGCCTCTG...TGGACTGTGCACTTTATTTGAGGGTGGGTGGGAGTAATCTAAACATTTATTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399357.7
ENST00000403527.5
ENST00000420159.6
CDS-3UTR TCA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTTTCAGTGGCAGGCCATaGAAAGCCAAACTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: VMVIIQLQRELPILWLSSFSGRP*KAKLSA
Trigger: GGCTGAAAGTTTGGCTTTTCATGGCCTGCCACTGAA...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000430479.6
CDS-3UTR TCA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTTTCAGTGGCAGGCCATaGAAAGCCAAACTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISFSGRP*KAKLSA
Trigger: GGCTGAAAGTTTGGCTTTTCATGGCCTGCCACTGAA...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000430479.6
CDS-3UTR GCA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTTTAAGCAGTGAGGGCTaGATCTCTGAAGCCACTTGC +
Preference number: 4 (lower is better)
Translates to: VMVIIQLQRELPILWLSSLSSEG*ISEATC
Trigger: GCAAGTGGCTTCAGAGATGCAGCCCTCACTGCTTAA...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242066.9
CDS-3UTR GCA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTATCCATCCATGCTGCTaGTCTTCGCAAATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: MDNISASTMSYSNFLIFFIHPCC*SSQISA
Trigger: AGCTGAGATTTGCGAAGAGCAGCAGCATGGATGGAT...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000405192.6
ENST00000405218.6
ENST00000430479.6
CDS-3UTR GCA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGAAAATCCATCCATGCTaGTGCTCTTCGCAAATCTCA +
Preference number: 4 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKKIHPC*CSSQIS
Trigger: TGAGATTTGCGAAGAGCAGCAGCATGGATGGATTTT...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000405192.6
ENST00000405218.6
ENST00000430479.6
CDS-3UTR GCA 90 bp CAGAATAAATGTTTAGATTACTCCCACCCACCCTCAAATAAAGTGCACAGTCCAAAAATCCATCCATGCTaGTGCTCTTCGCAAATCTCA +
Preference number: 4 (lower is better)
Translates to: QNKCLDYSHPPSNKVHSPKIHPC*CSSQIS
Trigger: TGAGATTTGCGAAGAGCAGCAGCATGGATGGATTTT...TGGACTGTGCACTTTATTTGAGGGTGGGTGGGAGTAATCTAAACATTTATTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000405192.6
ENST00000405218.6
ENST00000430479.6
CDS-3UTR GCA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTCCGGCATGTAGGCCATaGTCTCATCAAAGTGAGAAA +
Preference number: 4 (lower is better)
Translates to: MDNISASTMSYSNFLIFFPACRP*SHQSEK
Trigger: TTTCTCACTTTGATGAGAGCATGGCCTACATGCCGG...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGAGCGCAAAAACGCCCTaGTTGACTGTCACTTGTGTT +
Preference number: 4 (lower is better)
Translates to: IYRSVQKEMMDNISASTMSAKTP*LTVTCV
Trigger: AACACAAGTGACAGTCAAGCAGGGCGTTTTTGCGCT...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTAGCGCAAAAACGCCCTaGTTGACTGTCACTTGTGTT +
Preference number: 4 (lower is better)
Translates to: MDNISASTMSYSNFLIFFSAKTP*LTVTCV
Trigger: AACACAAGTGACAGTCAAGCAGGGCGTTTTTGCGCT...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp GAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAGATTGAACACCCTCAAATAAAGTaGACAGTCCATGGCAGACCA +
Preference number: 4 (lower is better)
Translates to: EGNLTIVEEYVTMEAEIEHPQIK*TVHGRP
Trigger: TGGTCTGCCATGGACTGTGCACTTTATTTGAGGGTG...TTCAATCTCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGCACCCTCAAATAAAGTaGACAGTCCATGGCAGACCA +
Preference number: 4 (lower is better)
Translates to: IYRSVQKEMMDNISASTMHPQIK*TVHGRP
Trigger: TGGTCTGCCATGGACTGTGCACTTTATTTGAGGGTG...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp CCTTGCTTGAATCTTTTAGCGAGCTATTCAGAGATTCTATATCCCCATTTACTCAATGACAGGGGAAAATaGCCAAGGCAAATAGTCTCC +
Preference number: 4 (lower is better)
Translates to: PCLNLLASYSEILYPHLLNDRGK*PRQIVS
Trigger: GGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATT...GAGTAAATGGGGATATAGAATCTCTGAATAGCTCGCTAAAAGATTCAAGCAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp CTCATAAATGACAGGGGAAAATGCCCAAGGCAAATAGTCTCCAAGTGGATATTTCAGAGTCCAAAATTGTaGCCCTCATTTACAGTCATG +
Preference number: 4 (lower is better)
Translates to: LINDRGKCPRQIVSKWIFQSPKL*PSFTVM
Trigger: CATGACTGTAAATGAGGGGCACAATTTTGGACTCTG...AAATATCCACTTGGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATTTATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGCAGAGTCCAAAATTGTaGCCCTCATTTACAGTCATG +
Preference number: 4 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKQSPKL*PSFTVM
Trigger: CATGACTGTAAATGAGGGGCACAATTTTGGACTCTG...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTAGTCTTCCTCCTCCGTaGGGTGTTCTGAATAACAGC +
Preference number: 4 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISSLPPP*GVLNNS
Trigger: GCTGTTATTCAGAACACCGCACGGAGGAGGAAGACT...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp TTGAGTCATCTATTTTGTCCTGAAATGCTATCTGTAGTTAACTGCACTGCTTATGCGATCAACGAGACTTaGTTTGCACCTAACGGGACT +
Preference number: 4 (lower is better)
Translates to: LSHLFCPEMLSVVNCTAYAINET*FAPNGT
Trigger: AGTCCCGTTAGGTGCAAAGCAAGTCTCGTTGATCGC...ATAAGCAGTGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430479.6
CDS-3UTR CCA 90 bp CAGAATAAATGTTTAGATTACTCCCACCCACCCTCAAATAAAGTGCACAGTCCATTTCTTGATTTTCAGTaGCAGGCCATGAAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: QNKCLDYSHPPSNKVHSPFLDFQ*QAMKSH
Trigger: GTGGCTTTTCATGGCCTGCCACTGAAAATCAAGAAA...TGGACTGTGCACTTTATTTGAGGGTGGGTGGGAGTAATCTAAACATTTATTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242066.9
ENST00000420159.6
CDS-3UTR CCA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGGAAATCTGTGGTCCATaGGGTAGCTGCTATCTGGTA +
Preference number: 4 (lower is better)
Translates to: IYRSVQKEMMDNISASTMEICGP*GSCYLV
Trigger: TACCAGATAGCAGCTACCCCATGGACCACAGATTTC...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTGAAATCTGTGGTCCATaGGGTAGCTGCTATCTGGTA +
Preference number: 4 (lower is better)
Translates to: MDNISASTMSYSNFLIFFEICGP*GSCYLV
Trigger: TACCAGATAGCAGCTACCCCATGGACCACAGATTTC...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp TTGAGTCATCTATTTTGTCCTGAAATGCTATCTGTAGTTAACTGCACTGCTTATTCAGACATCTGGCGTTaGTACATAGGACGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LSHLFCPEMLSVVNCTAYSDIWR*YIGRPS
Trigger: GGAAGGACGTCCTATGTACCAACGCCAGATGTCTGA...ATAAGCAGTGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTTCAGACATCTGGCGTTaGTACATAGGACGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISSDIWR*YIGRPS
Trigger: GGAAGGACGTCCTATGTACCAACGCCAGATGTCTGA...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTTTGGCTCAGACATCTaGCGTTGGTACATAGGACGT +
Preference number: 4 (lower is better)
Translates to: IYRSVQKEMMDNISASTMFGSDI*RWYIGR
Trigger: ACGTCCTATGTACCAACGCCAGATGTCTGAGCCAAA...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp TATAAGAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAATTTGGCTCAGACATCTaGCGTTGGTACATAGGACGT +
Preference number: 4 (lower is better)
Translates to: YKRQEGNLTIVEEYVTMEFGSDI*RWYIGR
Trigger: ACGTCCTATGTACCAACGCCAGATGTCTGAGCCAAA...TTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTCTTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTTTTGGCTCAGACATCTaGCGTTGGTACATAGGACGT +
Preference number: 4 (lower is better)
Translates to: MDNISASTMSYSNFLIFFFGSDI*RWYIGR
Trigger: ACGTCCTATGTACCAACGCCAGATGTCTGAGCCAAA...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTCTTAAAGCCTTGTGGTaGGAAGGGGATGTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: VMVIIQLQRELPILWLSSLKALW*EGDVWL
Trigger: GAGCCAAACATCCCCTTCCCACCACAAGGCTTTAAG...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp TTGAGTCATCTATTTTGTCCTGAAATGCTATCTGTAGTTAACTGCACTGCTTATCTTAAAGCCTTGTGGTaGGAAGGGGATGTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: LSHLFCPEMLSVVNCTAYLKALW*EGDVWL
Trigger: GAGCCAAACATCCCCTTCCCACCACAAGGCTTTAAG...ATAAGCAGTGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTCTGCTTAAAGCCTTGTaGTGGGAAGGGGATGTTTGG +
Preference number: 4 (lower is better)
Translates to: VMVIIQLQRELPILWLSSLLKAL*WEGDVW
Trigger: CCAAACATCCCCTTCCCACCACAAGGCTTTAAGCAG...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp TATAAGAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAATCATACACTGGGTCGTaGTACTCCTGCTTAAAGCCT +
Preference number: 4 (lower is better)
Translates to: YKRQEGNLTIVEEYVTMESYTGS*YSCLKP
Trigger: AGGCTTTAAGCAGGAGTACCACGACCCAGTGTATGA...TTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTCTTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTTCATACACTGGGTCGTaGTACTCCTGCTTAAAGCCT +
Preference number: 4 (lower is better)
Translates to: MDNISASTMSYSNFLIFFSYTGS*YSCLKP
Trigger: AGGCTTTAAGCAGGAGTACCACGACCCAGTGTATGA...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp GAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAGATTGAATCATACACTGGGTCGTaGTACTCCTGCTTAAAGCCT +
Preference number: 4 (lower is better)
Translates to: EGNLTIVEEYVTMEAEIESYTGS*YSCLKP
Trigger: AGGCTTTAAGCAGGAGTACCACGACCCAGTGTATGA...TTCAATCTCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTGTTGTGTTCATACACTaGGTCGTGGTACTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: MDNISASTMSYSNFLIFFVVFIH*VVVLLL
Trigger: AAGCAGGAGTACCACGACCCAGTGTATGAACACAAC...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp TTGAGTCATCTATTTTGTCCTGAAATGCTATCTGTAGTTAACTGCACTGCTTATCCGCACTGCCAACCATaGTGTTGTGTTCATACACTG +
Preference number: 4 (lower is better)
Translates to: LSHLFCPEMLSVVNCTAYPHCQP*CCVHTL
Trigger: CAGTGTATGAACACAACACCATGGTTGGCAGTGCGG...ATAAGCAGTGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTCCGCACTGCCAACCATaGTGTTGTGTTCATACACTG +
Preference number: 4 (lower is better)
Translates to: VMVIIQLQRELPILWLSSPHCQP*CCVHTL
Trigger: CAGTGTATGAACACAACACCATGGTTGGCAGTGCGG...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTCCGCACTGCCAACCATaGTGTTGTGTTCATACACTG +
Preference number: 4 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISPHCQP*CCVHTL
Trigger: CAGTGTATGAACACAACACCATGGTTGGCAGTGCGG...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CAGAATAAATGTTTAGATTACTCCCACCCACCCTCAAATAAAGTGCACAGTCCACATCATAAAACTGCCTaGGGCCCTTTTCAAACATAC +
Preference number: 4 (lower is better)
Translates to: QNKCLDYSHPPSNKVHSPHHKTA*GPFQTY
Trigger: GTATGTTTGAAAAGGGCCCCAGGCAGTTTTATGATG...TGGACTGTGCACTTTATTTGAGGGTGGGTGGGAGTAATCTAAACATTTATTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CTCATAAATGACAGGGGAAAATGCCCAAGGCAAATAGTCTCCAAGTGGATATTTCATCATAAAACTGCCTaGGGCCCTTTTCAAACATAC +
Preference number: 4 (lower is better)
Translates to: LINDRGKCPRQIVSKWIFHHKTA*GPFQTY
Trigger: GTATGTTTGAAAAGGGCCCCAGGCAGTTTTATGATG...AAATATCCACTTGGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATTTATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CCTTGCTTGAATCTTTTAGCGAGCTATTCAGAGATTCTATATCCCCATTTACTCTTCCCGATACATTCCTaGCTCTTGTTTGATGTCTCC +
Preference number: 4 (lower is better)
Translates to: PCLNLLASYSEILYPHLLFPIHS*LLFDVS
Trigger: GGAGACATCAAACAAGAGCCAGGAATGTATCGGGAA...GAGTAAATGGGGATATAGAATCTCTGAATAGCTCGCTAAAAGATTCAAGCAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACTATCTGGAAAGGCCATaGAGAAAAGGGCTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: RSVQKEMMDNISASTMSYYLERP*RKGLLD
Trigger: ATCCAGAAGCCCTTTTCTCCATGGCCTTTCCAGATA...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACTCTAAGTGCTGTAGATaGCCACATAAGCATAGTGGG +
Preference number: 4 (lower is better)
Translates to: RSVQKEMMDNISASTMSYSKCCR*PHKHSG
Trigger: CCCACTATGCTTATGTGGCCATCTACAGCACTTAGA...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp GAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAGATTGAATCTAGAAGTGAAAGCTaGAAGAATCTCCCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: EGNLTIVEEYVTMEAEIESRSES*KNLPWS
Trigger: GCTCCAGGGGAGATTCTTCCAGCTTTCACTTCTAGA...TTCAATCTCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACCAGAGCTCAATTCGGTaGTTTTTCCTCTACTTCTCC +
Preference number: 4 (lower is better)
Translates to: RSVQKEMMDNISASTMSYQSSIR*FFLYFS
Trigger: GGAGAAGTAGAGGAAAAACCACCGAATTGAGCTCTG...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000405218.6
CDS-3UTR CCA 90 bp CTCATAAATGACAGGGGAAAATGCCCAAGGCAAATAGTCTCCAAGTGGATATTTGATTTCCTCAGGATCTaGACTTCTATCAACCTGAAG +
Preference number: 4 (lower is better)
Translates to: LINDRGKCPRQIVSKWIFDFLRI*TSINLK
Trigger: CTTCAGGTTGATAGAAGTCCAGATCCTGAGGAAATC...AAATATCCACTTGGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATTTATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405192.6
ENST00000405218.6
CDS-3UTR TCA 90 bp TATAAGAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAATCTATCAACTGTACTTaGCGCTTTCACTTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: YKRQEGNLTIVEEYVTMESINCT*RFHFLS
Trigger: GGAGAGGAAGTGAAAGCGTCAAGTACAGTTGATAGA...TTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTCTTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242066.9
CDS-3UTR TCA 90 bp CTCATAAATGACAGGGGAAAATGCCCAAGGCAAATAGTCTCCAAGTGGATATTTAGTTCTTCTGAATCATaGGCCAGATCTCTGTTAATG +
Preference number: 4 (lower is better)
Translates to: LINDRGKCPRQIVSKWIFSSSES*ARSLLM
Trigger: CATTAACAGAGATCTGGCTCATGATTCAGAAGAACT...AAATATCCACTTGGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATTTATGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000242066.9
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000430479.6
CDS-3UTR TCA 90 bp CAGAATAAATGTTTAGATTACTCCCACCCACCCTCAAATAAAGTGCACAGTCCAAGTTCTTCTGAATCATaGGCCAGATCTCTGTTAATG +
Preference number: 4 (lower is better)
Translates to: QNKCLDYSHPPSNKVHSPSSSES*ARSLLM
Trigger: CATTAACAGAGATCTGGCTCATGATTCAGAAGAACT...TGGACTGTGCACTTTATTTGAGGGTGGGTGGGAGTAATCTAAACATTTATTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000242066.9
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000430479.6
CDS-3UTR TCA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGTTGAAAGAGTTCTTCTaGATCATGAGCCAGATCTCT +
Preference number: 4 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKLKEFF*IMSQIS
Trigger: AGAGATCTGGCTCATGATTCAGAAGAACTCTTTCAA...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000242066.9
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000430479.6
CDS-3UTR TCA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTTGTGGGGTTCTTTCTTaGTTTTCAGTGGCAGGCCAT +
Preference number: 4 (lower is better)
Translates to: VMVIIQLQRELPILWLSSCGVLS*FSVAGH
Trigger: ATGGCCTGCCACTGAAAATCAAGAAAGAACCCCACA...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTTTAAAGGGCTGTTCTTaGCTGCAGGCAGAGCTGATT +
Preference number: 4 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISLKGCS*LQAELI
Trigger: AATCAGCTCTGCCTGCAGTCAAGAACAGCCCTTTAA...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACTTTCGGTGTATGAGTTaGGTTTGGAGATGCATGATG +
Preference number: 4 (lower is better)
Translates to: RSVQKEMMDNISASTMSYFRCMS*VWRCMM
Trigger: CATCATGCATCTCCAAACTCAACTCATACACCGAAA...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTTCAGGTTTCGGTGTATaGGTTGAGTTTGGAGATGCA +
Preference number: 4 (lower is better)
Translates to: MDNISASTMSYSNFLIFFSGFGV*VEFGDA
Trigger: TGCATCTCCAAACTCAACTCATACACCGAAACCTGA...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp GAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAGATTGAATCAGGTTTCGGTGTATaGGTTGAGTTTGGAGATGCA +
Preference number: 4 (lower is better)
Translates to: EGNLTIVEEYVTMEAEIESGFGV*VEFGDA
Trigger: TGCATCTCCAAACTCAACTCATACACCGAAACCTGA...TTCAATCTCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242066.9
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGTTCCTGGCTCTTGTTTaGTGTCTCCATCGAATTTTT +
Preference number: 4 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKFLALV*CLHRIF
Trigger: AAAAATTCGATGGAGACATCAAACAAGAGCCAGGAA...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CTCATAAATGACAGGGGAAAATGCCCAAGGCAAATAGTCTCCAAGTGGATATTTTTCCTGGCTCTTGTTTaGTGTCTCCATCGAATTTTT +
Preference number: 4 (lower is better)
Translates to: LINDRGKCPRQIVSKWIFFLALV*CLHRIF
Trigger: AAAAATTCGATGGAGACATCAAACAAGAGCCAGGAA...AAATATCCACTTGGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATTTATGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp TTGAGTCATCTATTTTGTCCTGAAATGCTATCTGTAGTTAACTGCACTGCTTATATGCTCTCATCAAAGTaGGAAAGAGGCACTGTGTCC +
Preference number: 4 (lower is better)
Translates to: LSHLFCPEMLSVVNCTAYMLSSK*ERGTVS
Trigger: GGACACAGTGCCTCTTTCTCACTTTGATGAGAGCAT...ATAAGCAGTGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTATGCTCTCATCAAAGTaGGAAAGAGGCACTGTGTCC +
Preference number: 4 (lower is better)
Translates to: VMVIIQLQRELPILWLSSMLSSK*ERGTVS
Trigger: GGACACAGTGCCTCTTTCTCACTTTGATGAGAGCAT...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTATGCTCTCATCAAAGTaGGAAAGAGGCACTGTGTCC +
Preference number: 4 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISMLSSK*ERGTVS
Trigger: GGACACAGTGCCTCTTTCTCACTTTGATGAGAGCAT...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACCAAAAACGCCCTGCTTaGCTGTCACTTGTGTTAATA +
Preference number: 4 (lower is better)
Translates to: RSVQKEMMDNISASTMSYQKRPA*LSLVLI
Trigger: TATTAACACAAGTGACAGTCAAGCAGGGCGTTTTTG...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTGCAGAGACTCATAAATaGCAGGGGAAAATGCCCAAG +
Preference number: 4 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISAETHK*QGKMPK
Trigger: CTTGGGCATTTTCCCCTGTCATTTATGAGTCTCTGC...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CTCATAAATGACAGGGGAAAATGCCCAAGGCAAATAGTCTCCAAGTGGATATTTGTGTCCAAAAAGAGATaGTGGATAATATCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: LINDRGKCPRQIVSKWIFVSKKR*WIISVP
Trigger: TGGCACTGATATTATCCATCATCTCTTTTTGGACAC...AAATATCCACTTGGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATTTATGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGGTGTCCAAAAAGAGATaGTGGATAATATCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKVSKKR*WIISVP
Trigger: TGGCACTGATATTATCCATCATCTCTTTTTGGACAC...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACCTCCACTTAGAGAAATaGGCTGTGATCTGTGTAGTT +
Preference number: 4 (lower is better)
Translates to: RSVQKEMMDNISASTMSYLHLEK*AVICVV
Trigger: AACTACACAGATCACAGCTCATTTCTCTAAGTGGAG...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGCCAATTCTTCCTCACTaGCTGACTAAAACTAGACTA +
Preference number: 4 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKPILPH*LTKTRL
Trigger: TAGTCTAGTTTTAGTCAGTCAGTGAGGAAGAATTGG...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CTCATAAATGACAGGGGAAAATGCCCAAGGCAAATAGTCTCCAAGTGGATATTTCCAATTCTTCCTCACTaGCTGACTAAAACTAGACTA +
Preference number: 4 (lower is better)
Translates to: LINDRGKCPRQIVSKWIFPILPH*LTKTRL
Trigger: TAGTCTAGTTTTAGTCAGTCAGTGAGGAAGAATTGG...AAATATCCACTTGGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATTTATGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGGATCCGCCCATGATTTaGGAAAAATGTTCTGCACTG +
Preference number: 4 (lower is better)
Translates to: IYRSVQKEMMDNISASTMDPPMI*EKCSAL
Trigger: CAGTGCAGAACATTTTTCTCAAATCATGGGCGGATC...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp GAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAGATTGAAGATCCGCCCATGATTTaGGAAAAATGTTCTGCACTG +
Preference number: 4 (lower is better)
Translates to: EGNLTIVEEYVTMEAEIEDPPMI*EKCSAL
Trigger: CAGTGCAGAACATTTTTCTCAAATCATGGGCGGATC...TTCAATCTCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CAGAATAAATGTTTAGATTACTCCCACCCACCCTCAAATAAAGTGCACAGTCCAGAACTCCACTGTTCCTaGGTAAATCAATTAGAGTCT +
Preference number: 4 (lower is better)
Translates to: QNKCLDYSHPPSNKVHSPELHCS*VNQLES
Trigger: AGACTCTAATTGATTTACTCAGGAACAGTGGAGTTC...TGGACTGTGCACTTTATTTGAGGGTGGGTGGGAGTAATCTAAACATTTATTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CTCATAAATGACAGGGGAAAATGCCCAAGGCAAATAGTCTCCAAGTGGATATTTGAACTCCACTGTTCCTaGGTAAATCAATTAGAGTCT +
Preference number: 4 (lower is better)
Translates to: LINDRGKCPRQIVSKWIFELHCS*VNQLES
Trigger: AGACTCTAATTGATTTACTCAGGAACAGTGGAGTTC...AAATATCCACTTGGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATTTATGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CTCATAAATGACAGGGGAAAATGCCCAAGGCAAATAGTCTCCAAGTGGATATTTCCTAAAAGTACTAGTTaGGCTCTGAATAAACTGGGT +
Preference number: 4 (lower is better)
Translates to: LINDRGKCPRQIVSKWIFPKSTS*ALNKLG
Trigger: ACCCAGTTTATTCAGAGCTCAACTAGTACTTTTAGG...AAATATCCACTTGGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATTTATGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACCAGAGGCTTAGAACTTaGAGTCTTGGTGCATTAGTT +
Preference number: 4 (lower is better)
Translates to: RSVQKEMMDNISASTMSYQRLRT*SLGALV
Trigger: AACTAATGCACCAAGACTTCAAGTTCTAAGCCTCTG...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399357.7
ENST00000403527.5
ENST00000420159.6
CDS-3UTR GCA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTCCGGCATGTAGGCCATaGTCTCATCAAAGTGAGAAA +
Preference number: 4 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISPACRP*SHQSEK
Trigger: TTTCTCACTTTGATGAGAGCATGGCCTACATGCCGG...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTCCGGCATGTAGGCCATaGTCTCATCAAAGTGAGAAA +
Preference number: 4 (lower is better)
Translates to: VMVIIQLQRELPILWLSSPACRP*SHQSEK
Trigger: TTTCTCACTTTGATGAGAGCATGGCCTACATGCCGG...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTAGCGCAAAAACGCCCTaGTTGACTGTCACTTGTGTT +
Preference number: 4 (lower is better)
Translates to: VMVIIQLQRELPILWLSSSAKTP*LTVTCV
Trigger: AACACAAGTGACAGTCAAGCAGGGCGTTTTTGCGCT...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp TTGAGTCATCTATTTTGTCCTGAAATGCTATCTGTAGTTAACTGCACTGCTTATAGCGCAAAAACGCCCTaGTTGACTGTCACTTGTGTT +
Preference number: 4 (lower is better)
Translates to: LSHLFCPEMLSVVNCTAYSAKTP*LTVTCV
Trigger: AACACAAGTGACAGTCAAGCAGGGCGTTTTTGCGCT...ATAAGCAGTGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTAGCGCAAAAACGCCCTaGTTGACTGTCACTTGTGTT +
Preference number: 4 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISSAKTP*LTVTCV
Trigger: AACACAAGTGACAGTCAAGCAGGGCGTTTTTGCGCT...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTCACCCTCAAATAAAGTaGACAGTCCATGGCAGACCA +
Preference number: 4 (lower is better)
Translates to: VMVIIQLQRELPILWLSSHPQIK*TVHGRP
Trigger: TGGTCTGCCATGGACTGTGCACTTTATTTGAGGGTG...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp TATAAGAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAAATGACAGGGGAAAATaGCCAAGGCAAATAGTCTCC +
Preference number: 4 (lower is better)
Translates to: YKRQEGNLTIVEEYVTMENDRGK*PRQIVS
Trigger: GGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATT...TTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTCTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGAATGACAGGGGAAAATaGCCAAGGCAAATAGTCTCC +
Preference number: 4 (lower is better)
Translates to: IYRSVQKEMMDNISASTMNDRGK*PRQIVS
Trigger: GGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATT...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGTCTGAACATGGACTGTaGGGTTCTTTCTTGATTTTC +
Preference number: 4 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKSEHGL*GSFLIF
Trigger: GAAAATCAAGAAAGAACCCCACAGTCCATGTTCAGA...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTGAAATCTGTGGTCCATaGGGTAGCTGCTATCTGGTA +
Preference number: 4 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISEICGP*GSCYLV
Trigger: TACCAGATAGCAGCTACCCCATGGACCACAGATTTC...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTGAAATCTGTGGTCCATaGGGTAGCTGCTATCTGGTA +
Preference number: 4 (lower is better)
Translates to: VMVIIQLQRELPILWLSSEICGP*GSCYLV
Trigger: TACCAGATAGCAGCTACCCCATGGACCACAGATTTC...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTTTTGGCTCAGACATCTaGCGTTGGTACATAGGACGT +
Preference number: 4 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISFGSDI*RWYIGR
Trigger: ACGTCCTATGTACCAACGCCAGATGTCTGAGCCAAA...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTTTTGGCTCAGACATCTaGCGTTGGTACATAGGACGT +
Preference number: 4 (lower is better)
Translates to: VMVIIQLQRELPILWLSSFGSDI*RWYIGR
Trigger: ACGTCCTATGTACCAACGCCAGATGTCTGAGCCAAA...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTTCATACACTGGGTCGTaGTACTCCTGCTTAAAGCCT +
Preference number: 4 (lower is better)
Translates to: VMVIIQLQRELPILWLSSSYTGS*YSCLKP
Trigger: AGGCTTTAAGCAGGAGTACCACGACCCAGTGTATGA...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTGTTGTGTTCATACACTaGGTCGTGGTACTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISVVFIH*VVVLLL
Trigger: AAGCAGGAGTACCACGACCCAGTGTATGAACACAAC...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CCTTGCTTGAATCTTTTAGCGAGCTATTCAGAGATTCTATATCCCCATTTACTCCATCATAAAACTGCCTaGGGCCCTTTTCAAACATAC +
Preference number: 4 (lower is better)
Translates to: PCLNLLASYSEILYPHLLHHKTA*GPFQTY
Trigger: GTATGTTTGAAAAGGGCCCCAGGCAGTTTTATGATG...GAGTAAATGGGGATATAGAATCTCTGAATAGCTCGCTAAAAGATTCAAGCAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTTCCCGATACATTCCTaGCTCTTGTTTGATGTCTCC +
Preference number: 4 (lower is better)
Translates to: IYRSVQKEMMDNISASTMFPIHS*LLFDVS
Trigger: GGAGACATCAAACAAGAGCCAGGAATGTATCGGGAA...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp TATAAGAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAATTCCCGATACATTCCTaGCTCTTGTTTGATGTCTCC +
Preference number: 4 (lower is better)
Translates to: YKRQEGNLTIVEEYVTMEFPIHS*LLFDVS
Trigger: GGAGACATCAAACAAGAGCCAGGAATGTATCGGGAA...TTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTCTTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTATCTGGAAAGGCCATaGAGAAAAGGGCTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: IYRSVQKEMMDNISASTMYLERP*RKGLLD
Trigger: ATCCAGAAGCCCTTTTCTCCATGGCCTTTCCAGATA...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp GAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAGATTGAATATCTGGAAAGGCCATaGAGAAAAGGGCTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: EGNLTIVEEYVTMEAEIEYLERP*RKGLLD
Trigger: ATCCAGAAGCCCTTTTCTCCATGGCCTTTCCAGATA...TTCAATCTCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTTATCTGGAAAGGCCATaGAGAAAAGGGCTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: MDNISASTMSYSNFLIFFYLERP*RKGLLD
Trigger: ATCCAGAAGCCCTTTTCTCCATGGCCTTTCCAGATA...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp GAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAGATTGAAGTGATAACGTTAGCATaGCCCAATTCTTCCTCACTG +
Preference number: 4 (lower is better)
Translates to: EGNLTIVEEYVTMEAEIEVITLA*PNSSSL
Trigger: CAGTGAGGAAGAATTGGGCCATGCTAACGTTATCAC...TTCAATCTCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTGTGATAACGTTAGCATaGCCCAATTCTTCCTCACTG +
Preference number: 4 (lower is better)
Translates to: MDNISASTMSYSNFLIFFVITLA*PNSSSL
Trigger: CAGTGAGGAAGAATTGGGCCATGCTAACGTTATCAC...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp TTGAGTCATCTATTTTGTCCTGAAATGCTATCTGTAGTTAACTGCACTGCTTATTCTAGAAGTGAAAGCTaGAAGAATCTCCCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: LSHLFCPEMLSVVNCTAYSRSES*KNLPWS
Trigger: GCTCCAGGGGAGATTCTTCCAGCTTTCACTTCTAGA...ATAAGCAGTGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTTCTAGAAGTGAAAGCTaGAAGAATCTCCCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISSRSES*KNLPWS
Trigger: GCTCCAGGGGAGATTCTTCCAGCTTTCACTTCTAGA...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGGCTCTAGGAGGTCTCTaGAGGTACAATAATATAAAC +
Preference number: 4 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKALGGL*RYNNIN
Trigger: GTTTATATTATTGTACCTCCAGAGACCTCCTAGAGC...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399357.7
ENST00000403527.5
ENST00000420159.6
CDS-3UTR CCA 90 bp CTCATAAATGACAGGGGAAAATGCCCAAGGCAAATAGTCTCCAAGTGGATATTTTTTCTTGATTTTCAGTaGCAGGCCATGAAAAGCCAA +
Preference number: 4 (lower is better)
Translates to: LINDRGKCPRQIVSKWIFFLDFQ*QAMKSQ
Trigger: TTGGCTTTTCATGGCCTGCCACTGAAAATCAAGAAA...AAATATCCACTTGGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATTTATGAG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 22 nt.
Matches the following 6 transcripts:
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000430479.6
CDS-3UTR CCA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGTTTCTTGATTTTCAGTaGCAGGCCATGAAAAGCCAA +
Preference number: 4 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKFLDFQ*QAMKSQ
Trigger: TTGGCTTTTCATGGCCTGCCACTGAAAATCAAGAAA...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000430479.6
CDS-3UTR CCA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGTCATTCTTTTCAATGTaGCAGACAAACCCAGCCAAA +
Preference number: 4 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKSFFSM*QTNPAK
Trigger: TTTGGCTGGGTTTGTCTGCCACATTGAAAAGAATGA...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000405358.8
CDS-3UTR CCA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACGATTTCCTCAGGATCTaGACTTCTATCAACCTGAAG +
Preference number: 4 (lower is better)
Translates to: RSVQKEMMDNISASTMSYDFLRI*TSINLK
Trigger: CTTCAGGTTGATAGAAGTCCAGATCCTGAGGAAATC...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405192.6
ENST00000405218.6
CDS-3UTR TCA 90 bp TATAAGAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAATTTCGGTGTATGAGTTaGGTTTGGAGATGCATGATG +
Preference number: 4 (lower is better)
Translates to: YKRQEGNLTIVEEYVTMEFRCMS*VWRCMM
Trigger: CATCATGCATCTCCAAACTCAACTCATACACCGAAA...TTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTCTTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242066.9
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTTCAGGTTTCGGTGTATaGGTTGAGTTTGGAGATGCA +
Preference number: 4 (lower is better)
Translates to: VMVIIQLQRELPILWLSSSGFGV*VEFGDA
Trigger: TGCATCTCCAAACTCAACTCATACACCGAAACCTGA...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp TTGAGTCATCTATTTTGTCCTGAAATGCTATCTGTAGTTAACTGCACTGCTTATTCAGGTTTCGGTGTATaGGTTGAGTTTGGAGATGCA +
Preference number: 4 (lower is better)
Translates to: LSHLFCPEMLSVVNCTAYSGFGV*VEFGDA
Trigger: TGCATCTCCAAACTCAACTCATACACCGAAACCTGA...ATAAGCAGTGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACTTCCTGGCTCTTGTTTaGTGTCTCCATCGAATTTTT +
Preference number: 4 (lower is better)
Translates to: RSVQKEMMDNISASTMSYFLALV*CLHRIF
Trigger: AAAAATTCGATGGAGACATCAAACAAGAGCCAGGAA...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp TATAAGAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAACAAAAACGCCCTGCTTaGCTGTCACTTGTGTTAATA +
Preference number: 4 (lower is better)
Translates to: YKRQEGNLTIVEEYVTMEQKRPA*LSLVLI
Trigger: TATTAACACAAGTGACAGTCAAGCAGGGCGTTTTTG...TTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTCTTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CAGAATAAATGTTTAGATTACTCCCACCCACCCTCAAATAAAGTGCACAGTCCACATTTACAGTCATGGTaGTTATTCAACTTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: QNKCLDYSHPPSNKVHSPHLQSW*LFNFRE
Trigger: CTCTCTGAAGTTGAATAATCACCATGACTGTAAATG...TGGACTGTGCACTTTATTTGAGGGTGGGTGGGAGTAATCTAAACATTTATTCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CCTTGCTTGAATCTTTTAGCGAGCTATTCAGAGATTCTATATCCCCATTTACTCGTGTCCAAAAAGAGATaGTGGATAATATCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: PCLNLLASYSEILYPHLLVSKKR*WIISVP
Trigger: TGGCACTGATATTATCCATCATCTCTTTTTGGACAC...GAGTAAATGGGGATATAGAATCTCTGAATAGCTCGCTAAAAGATTCAAGCAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTCTCCACTTAGAGAAATaGGCTGTGATCTGTGTAGTT +
Preference number: 4 (lower is better)
Translates to: MDNISASTMSYSNFLIFFLHLEK*AVICVV
Trigger: AACTACACAGATCACAGCTCATTTCTCTAAGTGGAG...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCTCATTACAAGCTCTaGAAAGGCTGCATGATAGAC +
Preference number: 4 (lower is better)
Translates to: IYRSVQKEMMDNISASTMSHYKL*KGCMID
Trigger: GTCTATCATGCAGCCTTTTCAGAGCTTGTAATGAGA...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp TATAAGAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAATCTCATTACAAGCTCTaGAAAGGCTGCATGATAGAC +
Preference number: 4 (lower is better)
Translates to: YKRQEGNLTIVEEYVTMESHYKL*KGCMID
Trigger: GTCTATCATGCAGCCTTTTCAGAGCTTGTAATGAGA...TTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTCTTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CTCATAAATGACAGGGGAAAATGCCCAAGGCAAATAGTCTCCAAGTGGATATTTGTACTAGTTGAGCTCTaGATAAACTGGGTGAAATTT +
Preference number: 4 (lower is better)
Translates to: LINDRGKCPRQIVSKWIFVLVEL*INWVKF
Trigger: AAATTTCACCCAGTTTATTCAGAGCTCAACTAGTAC...AAATATCCACTTGGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATTTATGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGCAGAGGCTTAGAACTTaGAGTCTTGGTGCATTAGTT +
Preference number: 4 (lower is better)
Translates to: IYRSVQKEMMDNISASTMQRLRT*SLGALV
Trigger: AACTAATGCACCAAGACTTCAAGTTCTAAGCCTCTG...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399357.7
ENST00000403527.5
ENST00000420159.6
CDS-3UTR GCA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTAATGACAGGGGAAAATaGCCAAGGCAAATAGTCTCC +
Preference number: 4 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISNDRGK*PRQIVS
Trigger: GGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATT...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp CAAAGGGACTTGGCACACGTCATTAAGTTAAGGATCTTGAGATGGAGAGATTGTCTATCTGTAGTTAACTaGACTGCTTATAAATGGTCA +
Preference number: 4 (lower is better)
Translates to: QRDLAHVIKLRILRWRDCLSVVN*TAYKWS
Trigger: TGACCATTTATAAGCAGTGCAGTTAACTACAGATAG...ACAATCTCTCCATCTCAAGATCCTTAACTTAATGACGTGTGCCAAGTCCCTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp CTCATAAATGACAGGGGAAAATGCCCAAGGCAAATAGTCTCCAAGTGGATATTTAAAATTCATGTCCCTTaGTTGAATCTTTTAGCGAGC +
Preference number: 4 (lower is better)
Translates to: LINDRGKCPRQIVSKWIFKIHVP*LNLLAS
Trigger: GCTCGCTAAAAGATTCAAGCAAGGGACATGAATTTT...AAATATCCACTTGGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATTTATGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGAAAACACAAGAATCTTaGAGAAATCAGCTGCCAGAT +
Preference number: 4 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKKTQES*RNQLPD
Trigger: ATCTGGCAGCTGATTTCTGCAAGATTCTTGTGTTTT...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000405192.6
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp CAGAATAAATGTTTAGATTACTCCCACCCACCCTCAAATAAAGTGCACAGTCCATTGAGAAAAATGTTCTaGACTGTCAGTCTTGTGGAT +
Preference number: 4 (lower is better)
Translates to: QNKCLDYSHPPSNKVHSPLRKMF*TVSLVD
Trigger: ATCCACAAGACTGACAGTGCAGAACATTTTTCTCAA...TGGACTGTGCACTTTATTTGAGGGTGGGTGGGAGTAATCTAAACATTTATTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp CTCATAAATGACAGGGGAAAATGCCCAAGGCAAATAGTCTCCAAGTGGATATTTAACTTGAAGTCTTGGTaGATTAGTTCTTGCCAAAAG +
Preference number: 4 (lower is better)
Translates to: LINDRGKCPRQIVSKWIFNLKSW*ISSCQK
Trigger: CTTTTGGCAAGAACTAATGCACCAAGACTTCAAGTT...AAATATCCACTTGGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATTTATGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000399357.7
ENST00000403527.5
ENST00000420159.6
CDS-3UTR GCA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGAATAATGATATGCGCTaGTCTAAAGGAAACAGCAAG +
Preference number: 4 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKNNDMR*SKGNSK
Trigger: CTTGCTGTTTCCTTTAGAGCAGCGCATATCATTATT...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399357.7
ENST00000403527.5
ENST00000420159.6
CDS-3UTR CCA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACTCTGAACATGGACTGTaGGGTTCTTTCTTGATTTTC +
Preference number: 4 (lower is better)
Translates to: RSVQKEMMDNISASTMSYSEHGL*GSFLIF
Trigger: GAAAATCAAGAAAGAACCCCACAGTCCATGTTCAGA...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp TATAAGAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAACATCATAAAACTGCCTaGGGCCCTTTTCAAACATAC +
Preference number: 4 (lower is better)
Translates to: YKRQEGNLTIVEEYVTMEHHKTA*GPFQTY
Trigger: GTATGTTTGAAAAGGGCCCCAGGCAGTTTTATGATG...TTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTCTTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGCATCATAAAACTGCCTaGGGCCCTTTTCAAACATAC +
Preference number: 4 (lower is better)
Translates to: IYRSVQKEMMDNISASTMHHKTA*GPFQTY
Trigger: GTATGTTTGAAAAGGGCCCCAGGCAGTTTTATGATG...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp TTGAGTCATCTATTTTGTCCTGAAATGCTATCTGTAGTTAACTGCACTGCTTATTTCCCGATACATTCCTaGCTCTTGTTTGATGTCTCC +
Preference number: 4 (lower is better)
Translates to: LSHLFCPEMLSVVNCTAYFPIHS*LLFDVS
Trigger: GGAGACATCAAACAAGAGCCAGGAATGTATCGGGAA...ATAAGCAGTGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTTATCTGGAAAGGCCATaGAGAAAAGGGCTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISYLERP*RKGLLD
Trigger: ATCCAGAAGCCCTTTTCTCCATGGCCTTTCCAGATA...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTTATCTGGAAAGGCCATaGAGAAAAGGGCTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: VMVIIQLQRELPILWLSSYLERP*RKGLLD
Trigger: ATCCAGAAGCCCTTTTCTCCATGGCCTTTCCAGATA...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp TTGAGTCATCTATTTTGTCCTGAAATGCTATCTGTAGTTAACTGCACTGCTTATTCTAAGTGCTGTAGATaGCCACATAAGCATAGTGGG +
Preference number: 4 (lower is better)
Translates to: LSHLFCPEMLSVVNCTAYSKCCR*PHKHSG
Trigger: CCCACTATGCTTATGTGGCCATCTACAGCACTTAGA...ATAAGCAGTGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp TTGAGTCATCTATTTTGTCCTGAAATGCTATCTGTAGTTAACTGCACTGCTTATGTGATAACGTTAGCATaGCCCAATTCTTCCTCACTG +
Preference number: 4 (lower is better)
Translates to: LSHLFCPEMLSVVNCTAYVITLA*PNSSSL
Trigger: CAGTGAGGAAGAATTGGGCCATGCTAACGTTATCAC...ATAAGCAGTGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp GAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAGATTGAAGATGTGATTGTGAGCTaGAAGCAATTTCTCCTGGTA +
Preference number: 4 (lower is better)
Translates to: EGNLTIVEEYVTMEAEIEDVIVS*KQFLLV
Trigger: TACCAGGAGAAATTGCTTCCAGCTCACAATCACATC...TTCAATCTCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399357.7
ENST00000420159.6
CDS-3UTR CCA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACTTCAGCCTGATAGTCTaGTACAAACTGCTCATCATT +
Preference number: 4 (lower is better)
Translates to: RSVQKEMMDNISASTMSYFSLIV*YKLLII
Trigger: AATGATGAGCAGTTTGTACCAGACTATCAGGCTGAA...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000430479.6
CDS-3UTR TCA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTAGTTCTTCTGAATCATaGGCCAGATCTCTGTTAATG +
Preference number: 4 (lower is better)
Translates to: MDNISASTMSYSNFLIFFSSSES*ARSLLM
Trigger: CATTAACAGAGATCTGGCTCATGATTCAGAAGAACT...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000242066.9
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000430479.6
CDS-3UTR TCA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTTTGAAAGAGTTCTTCTaGATCATGAGCCAGATCTCT +
Preference number: 4 (lower is better)
Translates to: MDNISASTMSYSNFLIFFLKEFF*IMSQIS
Trigger: AGAGATCTGGCTCATGATTCAGAAGAACTCTTTCAA...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000242066.9
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000430479.6
CDS-3UTR TCA 90 bp TTGAGTCATCTATTTTGTCCTGAAATGCTATCTGTAGTTAACTGCACTGCTTATTTTCGGTGTATGAGTTaGGTTTGGAGATGCATGATG +
Preference number: 4 (lower is better)
Translates to: LSHLFCPEMLSVVNCTAYFRCMS*VWRCMM
Trigger: CATCATGCATCTCCAAACTCAACTCATACACCGAAA...ATAAGCAGTGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTTCCTGGCTCTTGTTTaGTGTCTCCATCGAATTTTT +
Preference number: 4 (lower is better)
Translates to: IYRSVQKEMMDNISASTMFLALV*CLHRIF
Trigger: AAAAATTCGATGGAGACATCAAACAAGAGCCAGGAA...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTCAAAAACGCCCTGCTTaGCTGTCACTTGTGTTAATA +
Preference number: 4 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISQKRPA*LSLVLI
Trigger: TATTAACACAAGTGACAGTCAAGCAGGGCGTTTTTG...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp TTGAGTCATCTATTTTGTCCTGAAATGCTATCTGTAGTTAACTGCACTGCTTATCAAAAACGCCCTGCTTaGCTGTCACTTGTGTTAATA +
Preference number: 4 (lower is better)
Translates to: LSHLFCPEMLSVVNCTAYQKRPA*LSLVLI
Trigger: TATTAACACAAGTGACAGTCAAGCAGGGCGTTTTTG...ATAAGCAGTGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACCATTTACAGTCATGGTaGTTATTCAACTTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: RSVQKEMMDNISASTMSYHLQSW*LFNFRE
Trigger: CTCTCTGAAGTTGAATAATCACCATGACTGTAAATG...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CCTTGCTTGAATCTTTTAGCGAGCTATTCAGAGATTCTATATCCCCATTTACTCCATTTACAGTCATGGTaGTTATTCAACTTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: PCLNLLASYSEILYPHLLHLQSW*LFNFRE
Trigger: CTCTCTGAAGTTGAATAATCACCATGACTGTAAATG...GAGTAAATGGGGATATAGAATCTCTGAATAGCTCGCTAAAAGATTCAAGCAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTGTGTCCAAAAAGAGATaGTGGATAATATCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: MDNISASTMSYSNFLIFFVSKKR*WIISVP
Trigger: TGGCACTGATATTATCCATCATCTCTTTTTGGACAC...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGGTGTCCAAAAAGAGATaGTGGATAATATCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: IYRSVQKEMMDNISASTMVSKKR*WIISVP
Trigger: TGGCACTGATATTATCCATCATCTCTTTTTGGACAC...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp GAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAGATTGAAGTGTCCAAAAAGAGATaGTGGATAATATCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: EGNLTIVEEYVTMEAEIEVSKKR*WIISVP
Trigger: TGGCACTGATATTATCCATCATCTCTTTTTGGACAC...TTCAATCTCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTCTCCACTTAGAGAAATaGGCTGTGATCTGTGTAGTT +
Preference number: 4 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISLHLEK*AVICVV
Trigger: AACTACACAGATCACAGCTCATTTCTCTAAGTGGAG...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTTCCAAGATCCGCCCATaGTTTGAGAAAAATGTTCTG +
Preference number: 4 (lower is better)
Translates to: VMVIIQLQRELPILWLSSSKIRP*FEKNVL
Trigger: CAGAACATTTTTCTCAAATCATGGGCGGATCTTGGA...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTGAACTCCACTGTTCCTaGGTAAATCAATTAGAGTCT +
Preference number: 4 (lower is better)
Translates to: MDNISASTMSYSNFLIFFELHCS*VNQLES
Trigger: AGACTCTAATTGATTTACTCAGGAACAGTGGAGTTC...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTTCTCATTACAAGCTCTaGAAAGGCTGCATGATAGAC +
Preference number: 4 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISSHYKL*KGCMID
Trigger: GTCTATCATGCAGCCTTTTCAGAGCTTGTAATGAGA...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp CCTTGCTTGAATCTTTTAGCGAGCTATTCAGAGATTCTATATCCCCATTTACTCGTACTAGTTGAGCTCTaGATAAACTGGGTGAAATTT +
Preference number: 4 (lower is better)
Translates to: PCLNLLASYSEILYPHLLVLVEL*INWVKF
Trigger: AAATTTCACCCAGTTTATTCAGAGCTCAACTAGTAC...GAGTAAATGGGGATATAGAATCTCTGAATAGCTCGCTAAAAGATTCAAGCAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp GAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAGATTGAACCTAAAAGTACTAGTTaGGCTCTGAATAAACTGGGT +
Preference number: 4 (lower is better)
Translates to: EGNLTIVEEYVTMEAEIEPKSTS*ALNKLG
Trigger: ACCCAGTTTATTCAGAGCTCAACTAGTACTTTTAGG...TTCAATCTCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp TATAAGAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAACCTAAAAGTACTAGTTaGGCTCTGAATAAACTGGGT +
Preference number: 4 (lower is better)
Translates to: YKRQEGNLTIVEEYVTMEPKSTS*ALNKLG
Trigger: ACCCAGTTTATTCAGAGCTCAACTAGTACTTTTAGG...TTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTCTTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGCCTAAAAGTACTAGTTaGGCTCTGAATAAACTGGGT +
Preference number: 4 (lower is better)
Translates to: IYRSVQKEMMDNISASTMPKSTS*ALNKLG
Trigger: ACCCAGTTTATTCAGAGCTCAACTAGTACTTTTAGG...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp TTGAGTCATCTATTTTGTCCTGAAATGCTATCTGTAGTTAACTGCACTGCTTATCAGAGTCCAAAATTGTaGCCCTCATTTACAGTCATG +
Preference number: 4 (lower is better)
Translates to: LSHLFCPEMLSVVNCTAYQSPKL*PSFTVM
Trigger: CATGACTGTAAATGAGGGGCACAATTTTGGACTCTG...ATAAGCAGTGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTCAGAGTCCAAAATTGTaGCCCTCATTTACAGTCATG +
Preference number: 4 (lower is better)
Translates to: VMVIIQLQRELPILWLSSQSPKL*PSFTVM
Trigger: CATGACTGTAAATGAGGGGCACAATTTTGGACTCTG...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGCTATCTGTAGTTAACTaGACTGCTTATAAATGGTCA +
Preference number: 4 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKLSVVN*TAYKWS
Trigger: TGACCATTTATAAGCAGTGCAGTTAACTACAGATAG...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp CAGAATAAATGTTTAGATTACTCCCACCCACCCTCAAATAAAGTGCACAGTCCACTATCTGTAGTTAACTaGACTGCTTATAAATGGTCA +
Preference number: 4 (lower is better)
Translates to: QNKCLDYSHPPSNKVHSPLSVVN*TAYKWS
Trigger: TGACCATTTATAAGCAGTGCAGTTAACTACAGATAG...TGGACTGTGCACTTTATTTGAGGGTGGGTGGGAGTAATCTAAACATTTATTCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACAAAATTCATGTCCCTTaGTTGAATCTTTTAGCGAGC +
Preference number: 4 (lower is better)
Translates to: RSVQKEMMDNISASTMSYKIHVP*LNLLAS
Trigger: GCTCGCTAAAAGATTCAAGCAAGGGACATGAATTTT...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp CAGAATAAATGTTTAGATTACTCCCACCCACCCTCAAATAAAGTGCACAGTCCATGTTTTTATTCTAAGTaGTGTAGATGGCCACATAAG +
Preference number: 4 (lower is better)
Translates to: QNKCLDYSHPPSNKVHSPCFYSK*CRWPHK
Trigger: CTTATGTGGCCATCTACAGCACTTAGAATAAAAACA...TGGACTGTGCACTTTATTTGAGGGTGGGTGGGAGTAATCTAAACATTTATTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACAAAACACAAGAATCTTaGAGAAATCAGCTGCCAGAT +
Preference number: 4 (lower is better)
Translates to: RSVQKEMMDNISASTMSYKTQES*RNQLPD
Trigger: ATCTGGCAGCTGATTTCTGCAAGATTCTTGTGTTTT...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000405192.6
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp CCTTGCTTGAATCTTTTAGCGAGCTATTCAGAGATTCTATATCCCCATTTACTCAAAACACAAGAATCTTaGAGAAATCAGCTGCCAGAT +
Preference number: 4 (lower is better)
Translates to: PCLNLLASYSEILYPHLLKTQES*RNQLPD
Trigger: ATCTGGCAGCTGATTTCTGCAAGATTCTTGTGTTTT...GAGTAAATGGGGATATAGAATCTCTGAATAGCTCGCTAAAAGATTCAAGCAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000405192.6
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp CCTTGCTTGAATCTTTTAGCGAGCTATTCAGAGATTCTATATCCCCATTTACTCTTGAGAAAAATGTTCTaGACTGTCAGTCTTGTGGAT +
Preference number: 4 (lower is better)
Translates to: PCLNLLASYSEILYPHLLLRKMF*TVSLVD
Trigger: ATCCACAAGACTGACAGTGCAGAACATTTTTCTCAA...GAGTAAATGGGGATATAGAATCTCTGAATAGCTCGCTAAAAGATTCAAGCAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACAACTTGAAGTCTTGGTaGATTAGTTCTTGCCAAAAG +
Preference number: 4 (lower is better)
Translates to: RSVQKEMMDNISASTMSYNLKSW*ISSCQK
Trigger: CTTTTGGCAAGAACTAATGCACCAAGACTTCAAGTT...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399357.7
ENST00000403527.5
ENST00000420159.6
CDS-3UTR CCA 90 bp GAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAGATTGAAGATTTCCTCAGGATCTaGACTTCTATCAACTGTACT +
Preference number: 4 (lower is better)
Translates to: EGNLTIVEEYVTMEAEIEDFLRI*TSINCT
Trigger: AGTACAGTTGATAGAAGTCCAGATCCTGAGGAAATC...TTCAATCTCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242066.9
CDS-3UTR CCA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTTCTGAACATGGACTGTaGGGTTCTTTCTTGATTTTC +
Preference number: 4 (lower is better)
Translates to: MDNISASTMSYSNFLIFFSEHGL*GSFLIF
Trigger: GAAAATCAAGAAAGAACCCCACAGTCCATGTTCAGA...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCTGAACATGGACTGTaGGGTTCTTTCTTGATTTTC +
Preference number: 4 (lower is better)
Translates to: IYRSVQKEMMDNISASTMSEHGL*GSFLIF
Trigger: GAAAATCAAGAAAGAACCCCACAGTCCATGTTCAGA...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp TTGAGTCATCTATTTTGTCCTGAAATGCTATCTGTAGTTAACTGCACTGCTTATCATCATAAAACTGCCTaGGGCCCTTTTCAAACATAC +
Preference number: 4 (lower is better)
Translates to: LSHLFCPEMLSVVNCTAYHHKTA*GPFQTY
Trigger: GTATGTTTGAAAAGGGCCCCAGGCAGTTTTATGATG...ATAAGCAGTGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGGAATTACCCATTTTATaGTTATCCTCTGCAAGTCAT +
Preference number: 4 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKELPIL*LSSASH
Trigger: ATGACTTGCAGAGGATAACCATAAAATGGGTAATTC...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CAGAATAAATGTTTAGATTACTCCCACCCACCCTCAAATAAAGTGCACAGTCCAGAATTACCCATTTTATaGTTATCCTCTGCAAGTCAT +
Preference number: 4 (lower is better)
Translates to: QNKCLDYSHPPSNKVHSPELPIL*LSSASH
Trigger: ATGACTTGCAGAGGATAACCATAAAATGGGTAATTC...TGGACTGTGCACTTTATTTGAGGGTGGGTGGGAGTAATCTAAACATTTATTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp CTCATAAATGACAGGGGAAAATGCCCAAGGCAAATAGTCTCCAAGTGGATATTTGAATTACCCATTTTATaGTTATCCTCTGCAAGTCAT +
Preference number: 4 (lower is better)
Translates to: LINDRGKCPRQIVSKWIFELPIL*LSSASH
Trigger: ATGACTTGCAGAGGATAACCATAAAATGGGTAATTC...AAATATCCACTTGGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATTTATGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTGATGTGATTGTGAGCTaGAAGCAATTTCTCCTGGTA +
Preference number: 4 (lower is better)
Translates to: VMVIIQLQRELPILWLSSDVIVS*KQFLLV
Trigger: TACCAGGAGAAATTGCTTCCAGCTCACAATCACATC...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399357.7
ENST00000403527.5
ENST00000420159.6
CDS-3UTR CCA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTGATGTGATTGTGAGCTaGAAGCAATTTCTCCTGGTA +
Preference number: 4 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISDVIVS*KQFLLV
Trigger: TACCAGGAGAAATTGCTTCCAGCTCACAATCACATC...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000399357.7
ENST00000403527.5
ENST00000420159.6
CDS-3UTR CCA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGGCTCTAGGAGGTCTCTaGAGGTACAATAATATAAAC +
Preference number: 4 (lower is better)
Translates to: IYRSVQKEMMDNISASTMALGGL*RYNNIN
Trigger: GTTTATATTATTGTACCTCCAGAGACCTCCTAGAGC...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399357.7
ENST00000403527.5
ENST00000420159.6
CDS-3UTR CCA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTTTCAGCCTGATAGTCTaGTACAAACTGCTCATCATT +
Preference number: 4 (lower is better)
Translates to: MDNISASTMSYSNFLIFFFSLIV*YKLLII
Trigger: AATGATGAGCAGTTTGTACCAGACTATCAGGCTGAA...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000430479.6
CDS-3UTR CCA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTTTTCTTGATTTTCAGTaGCAGGCCATGAAAAGCCAA +
Preference number: 4 (lower is better)
Translates to: MDNISASTMSYSNFLIFFFLDFQ*QAMKSQ
Trigger: TTGGCTTTTCATGGCCTGCCACTGAAAATCAAGAAA...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000430479.6
CDS-3UTR CCA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTTTCTTGATTTTCAGTaGCAGGCCATGAAAAGCCAA +
Preference number: 4 (lower is better)
Translates to: IYRSVQKEMMDNISASTMFLDFQ*QAMKSQ
Trigger: TTGGCTTTTCATGGCCTGCCACTGAAAATCAAGAAA...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000430479.6
3UTR CAA 72 bp GAAATGGGCTTCAAAATATTTAAAAGACGGTATGATTaGTATCTAAACAGCAAGGTGGCACCAGATACACGT +
Preference number: 4 (lower is better)
Translates to: EMGFKIFKRRYD*YLNSKVAPDTR
Trigger: ACGTGTATCTGGTGCCACCTTGCTGTTTAGATACAAATCATACCGTCTTTTAAATATTTTGAAGCCCATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTAGTTCTTCTGAATCATaGGCCAGATCTCTGTTAATG +
Preference number: 4 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISSSSES*ARSLLM
Trigger: CATTAACAGAGATCTGGCTCATGATTCAGAAGAACT...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000242066.9
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000430479.6
CDS-3UTR TCA 90 bp TTGAGTCATCTATTTTGTCCTGAAATGCTATCTGTAGTTAACTGCACTGCTTATTTGAAAGAGTTCTTCTaGATCATGAGCCAGATCTCT +
Preference number: 4 (lower is better)
Translates to: LSHLFCPEMLSVVNCTAYLKEFF*IMSQIS
Trigger: AGAGATCTGGCTCATGATTCAGAAGAACTCTTTCAA...ATAAGCAGTGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000242066.9
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000430479.6
CDS-3UTR TCA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTTTGAAAGAGTTCTTCTaGATCATGAGCCAGATCTCT +
Preference number: 4 (lower is better)
Translates to: VMVIIQLQRELPILWLSSLKEFF*IMSQIS
Trigger: AGAGATCTGGCTCATGATTCAGAAGAACTCTTTCAA...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000242066.9
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000430479.6
CDS-3UTR TCA 90 bp TTGAGTCATCTATTTTGTCCTGAAATGCTATCTGTAGTTAACTGCACTGCTTATTTCCTGGCTCTTGTTTaGTGTCTCCATCGAATTTTT +
Preference number: 4 (lower is better)
Translates to: LSHLFCPEMLSVVNCTAYFLALV*CLHRIF
Trigger: AAAAATTCGATGGAGACATCAAACAAGAGCCAGGAA...ATAAGCAGTGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTTTCCTGGCTCTTGTTTaGTGTCTCCATCGAATTTTT +
Preference number: 4 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISFLALV*CLHRIF
Trigger: AAAAATTCGATGGAGACATCAAACAAGAGCCAGGAA...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp TATAAGAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAACATTTACAGTCATGGTaGTTATTCAACTTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: YKRQEGNLTIVEEYVTMEHLQSW*LFNFRE
Trigger: CTCTCTGAAGTTGAATAATCACCATGACTGTAAATG...TTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTCTTATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTCCAATTCTTCCTCACTaGCTGACTAAAACTAGACTA +
Preference number: 4 (lower is better)
Translates to: VMVIIQLQRELPILWLSSPILPH*LTKTRL
Trigger: TAGTCTAGTTTTAGTCAGTCAGTGAGGAAGAATTGG...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTCCAATTCTTCCTCACTaGCTGACTAAAACTAGACTA +
Preference number: 4 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISPILPH*LTKTRL
Trigger: TAGTCTAGTTTTAGTCAGTCAGTGAGGAAGAATTGG...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTGAACTCCACTGTTCCTaGGTAAATCAATTAGAGTCT +
Preference number: 4 (lower is better)
Translates to: VMVIIQLQRELPILWLSSELHCS*VNQLES
Trigger: AGACTCTAATTGATTTACTCAGGAACAGTGGAGTTC...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp TATAAGAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAATCTAAAGGCTTGATGTaGTTACCAGACATTTTAGTG +
Preference number: 4 (lower is better)
Translates to: YKRQEGNLTIVEEYVTMESKGLM*LPDILV
Trigger: CACTAAAATGTCTGGTAATCACATCAAGCCTTTAGA...TTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTCTTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTTCTAAAGGCTTGATGTaGTTACCAGACATTTTAGTG +
Preference number: 4 (lower is better)
Translates to: MDNISASTMSYSNFLIFFSKGLM*LPDILV
Trigger: CACTAAAATGTCTGGTAATCACATCAAGCCTTTAGA...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTCAATTTCTCCCACGCTaGCTTTCATTCTTTTCAATG +
Preference number: 4 (lower is better)
Translates to: VMVIIQLQRELPILWLSSQFLPR*LSFFSM
Trigger: CATTGAAAAGAATGAAAGTCAGCGTGGGAGAAATTG...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405358.8
CDS-3UTR GCA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTAAAATTCATGTCCCTTaGTTGAATCTTTTAGCGAGC +
Preference number: 4 (lower is better)
Translates to: MDNISASTMSYSNFLIFFKIHVP*LNLLAS
Trigger: GCTCGCTAAAAGATTCAAGCAAGGGACATGAATTTT...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp CCTTGCTTGAATCTTTTAGCGAGCTATTCAGAGATTCTATATCCCCATTTACTCTGTTTTTATTCTAAGTaGTGTAGATGGCCACATAAG +
Preference number: 4 (lower is better)
Translates to: PCLNLLASYSEILYPHLLCFYSK*CRWPHK
Trigger: CTTATGTGGCCATCTACAGCACTTAGAATAAAAACA...GAGTAAATGGGGATATAGAATCTCTGAATAGCTCGCTAAAAGATTCAAGCAAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp GAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAGATTGAATTGAGAAAAATGTTCTaGACTGTCAGTCTTGTGGAT +
Preference number: 4 (lower is better)
Translates to: EGNLTIVEEYVTMEAEIELRKMF*TVSLVD
Trigger: ATCCACAAGACTGACAGTGCAGAACATTTTTCTCAA...TTCAATCTCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGAACTTGAAGTCTTGGTaGATTAGTTCTTGCCAAAAG +
Preference number: 4 (lower is better)
Translates to: IYRSVQKEMMDNISASTMNLKSW*ISSCQK
Trigger: CTTTTGGCAAGAACTAATGCACCAAGACTTCAAGTT...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399357.7
ENST00000403527.5
ENST00000420159.6
CDS-3UTR GCA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGAATAATGATATGCGCTaGTCTAAAGGAAACAGCAAG +
Preference number: 4 (lower is better)
Translates to: IYRSVQKEMMDNISASTMNNDMR*SKGNSK
Trigger: CTTGCTGTTTCCTTTAGAGCAGCGCATATCATTATT...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000399357.7
ENST00000403527.5
ENST00000420159.6
CDS-3UTR CCA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTTCTGAACATGGACTGTaGGGTTCTTTCTTGATTTTC +
Preference number: 4 (lower is better)
Translates to: VMVIIQLQRELPILWLSSSEHGL*GSFLIF
Trigger: GAAAATCAAGAAAGAACCCCACAGTCCATGTTCAGA...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTTCTGAACATGGACTGTaGGGTTCTTTCTTGATTTTC +
Preference number: 4 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISSEHGL*GSFLIF
Trigger: GAAAATCAAGAAAGAACCCCACAGTCCATGTTCAGA...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp TTGAGTCATCTATTTTGTCCTGAAATGCTATCTGTAGTTAACTGCACTGCTTATTTCAGCCTGATAGTCTaGTACAAACTGCTCATCATT +
Preference number: 4 (lower is better)
Translates to: LSHLFCPEMLSVVNCTAYFSLIV*YKLLII
Trigger: AATGATGAGCAGTTTGTACCAGACTATCAGGCTGAA...ATAAGCAGTGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000430479.6
CDS-3UTR TCA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTCATTTACAGTCATGGTaGTTATTCAACTTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISHLQSW*LFNFRE
Trigger: CTCTCTGAAGTTGAATAATCACCATGACTGTAAATG...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTTCTAAAGGCTTGATGTaGTTACCAGACATTTTAGTG +
Preference number: 4 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISSKGLM*LPDILV
Trigger: CACTAAAATGTCTGGTAATCACATCAAGCCTTTAGA...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTTCTAAAGGCTTGATGTaGTTACCAGACATTTTAGTG +
Preference number: 4 (lower is better)
Translates to: VMVIIQLQRELPILWLSSSKGLM*LPDILV
Trigger: CACTAAAATGTCTGGTAATCACATCAAGCCTTTAGA...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTGTACTAGTTGAGCTCTaGATAAACTGGGTGAAATTT +
Preference number: 4 (lower is better)
Translates to: VMVIIQLQRELPILWLSSVLVEL*INWVKF
Trigger: AAATTTCACCCAGTTTATTCAGAGCTCAACTAGTAC...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR TCA 90 bp TTGAGTCATCTATTTTGTCCTGAAATGCTATCTGTAGTTAACTGCACTGCTTATTTCAAACATACAGCCTaGGTCATATGCAAAATCTCT +
Preference number: 4 (lower is better)
Translates to: LSHLFCPEMLSVVNCTAYFKHTA*VICKIS
Trigger: AGAGATTTTGCATATGACTCAGGCTGTATGTTTGAA...ATAAGCAGTGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405192.6
CDS-3UTR GCA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTAAAATTCATGTCCCTTaGTTGAATCTTTTAGCGAGC +
Preference number: 4 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISKIHVP*LNLLAS
Trigger: GCTCGCTAAAAGATTCAAGCAAGGGACATGAATTTT...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTAAAACACAAGAATCTTaGAGAAATCAGCTGCCAGAT +
Preference number: 4 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISKTQES*RNQLPD
Trigger: ATCTGGCAGCTGATTTCTGCAAGATTCTTGTGTTTT...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000405192.6
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp TTGAGTCATCTATTTTGTCCTGAAATGCTATCTGTAGTTAACTGCACTGCTTATTTGAGAAAAATGTTCTaGACTGTCAGTCTTGTGGAT +
Preference number: 4 (lower is better)
Translates to: LSHLFCPEMLSVVNCTAYLRKMF*TVSLVD
Trigger: ATCCACAAGACTGACAGTGCAGAACATTTTTCTCAA...ATAAGCAGTGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp TATAAGAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAACAAATAGTCTCCAAGTaGATATTTACACAACGTGAA +
Preference number: 4 (lower is better)
Translates to: YKRQEGNLTIVEEYVTMEQIVSK*IFTQRE
Trigger: TTCACGTTGTGTAAATATCCACTTGGAGACTATTTG...TTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTCTTATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTCTATCTGTAGTTAACTaGACTGCTTATAAATGGTCA +
Preference number: 4 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISLSVVN*TAYKWS
Trigger: TGACCATTTATAAGCAGTGCAGTTAACTACAGATAG...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTCTATCTGTAGTTAACTaGACTGCTTATAAATGGTCA +
Preference number: 4 (lower is better)
Translates to: VMVIIQLQRELPILWLSSLSVVN*TAYKWS
Trigger: TGACCATTTATAAGCAGTGCAGTTAACTACAGATAG...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTTGTTTTTATTCTAAGTaGTGTAGATGGCCACATAAG +
Preference number: 4 (lower is better)
Translates to: VMVIIQLQRELPILWLSSCFYSK*CRWPHK
Trigger: CTTATGTGGCCATCTACAGCACTTAGAATAAAAACA...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR GCA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTTGTTTTTATTCTAAGTaGTGTAGATGGCCACATAAG +
Preference number: 4 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISCFYSK*CRWPHK
Trigger: CTTATGTGGCCATCTACAGCACTTAGAATAAAAACA...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp TTGAGTCATCTATTTTGTCCTGAAATGCTATCTGTAGTTAACTGCACTGCTTATCAAATAGTCTCCAAGTaGATATTTACACAACGTGAA +
Preference number: 4 (lower is better)
Translates to: LSHLFCPEMLSVVNCTAYQIVSK*IFTQRE
Trigger: TTCACGTTGTGTAAATATCCACTTGGAGACTATTTG...ATAAGCAGTGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTCAAATAGTCTCCAAGTaGATATTTACACAACGTGAA +
Preference number: 4 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISQIVSK*IFTQRE
Trigger: TTCACGTTGTGTAAATATCCACTTGGAGACTATTTG...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CCA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTGAATTACCCATTTTATaGTTATCCTCTGCAAGTCAT +
Preference number: 4 (lower is better)
Translates to: VMVIIQLQRELPILWLSSELPIL*LSSASH
Trigger: ATGACTTGCAGAGGATAACCATAAAATGGGTAATTC...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS CCA 90 bp TCTCCCTCGCCCCTCTGCCCTAGGGGGTGCTCGGCCGGTAGGCGCTaGGTCCTCAGCCTGGAAGCGCCACGGAGAGACTCGATTTCCTCT +
Preference number: 5 (lower is better)
Translates to: SPSPLCPRGCSAGRR*VLSLEAPRRDSISS
Trigger: AGAGGAAATCGAGTCTCTCCGTGGCGCTTCCAGGCTGAGGACCCAGCGCCTACCGGCCGAGCACCCCCTAGGGCAGAGGGGCGAGGGAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405218.6
CDS CCA 90 bp GCTGGCGGCGAAATCTGTGGTCCATGGGGTAGCTGCTATCTGGTATaGACTGCGATGGAGGGAGGTGAGCTGGGAAGGCCCGGTCAGGTT +
Preference number: 5 (lower is better)
Translates to: AGGEICGPWGSCYLV*TAMEGGELGRPGQV
Trigger: AACCTGACCGGGCCTTCCCAGCTCACCTCCCTCCATCGCAGTCCATACCAGATAGCAGCTACCCCATGGACCACAGATTTCGCCGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000403685.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
ENST00000438956.5
ENST00000443137.5
ENST00000472931.6
ENST00000476720.6
ENST00000497115.5
CDS-3UTR CAA 90 bp GGTTGCAGCAGCCCCCTTCCGGCATGTAGGCCATGCTCTCATCAAAGTGAGAAAAGCCAGAGCCCAGGGTaGGGGGCGAGCGGTGAGATG +
Preference number: 5 (lower is better)
Translates to: GCSSPLPACRPCSHQSEKSQSPG*GASGEM
Trigger: CATCTCACCGCTCGCCCCCAACCCTGGGCTCTGGCT...TTTCTCACTTTGATGAGAGCATGGCCTACATGCCGGAAGGGGGCTGCTGCAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS CCA 90 bp AGAAAGCTGGCGGCGAAATCTGTGGTCCATGGGGTAGCTGCTATCTaGTATGGACTGCGATGGAGGGAGGTGAGCTGGGAAGGCCCGGTC +
Preference number: 5 (lower is better)
Translates to: RKLAAKSVVHGVAAI*YGLRWREVSWEGPV
Trigger: GACCGGGCCTTCCCAGCTCACCTCCCTCCATCGCAGTCCATACCAGATAGCAGCTACCCCATGGACCACAGATTTCGCCGCCAGCTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000403685.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
ENST00000438956.5
ENST00000443137.5
ENST00000472931.6
ENST00000476720.6
ENST00000497115.5
CDS-3UTR CAA 90 bp CATAGCTGGCCTGTTTTTCTGAATGCCCCAACGTCGGGCCACCTCTTCAGGCTCAGGAGGGGGAAAGCTTaGGCTGGCCGCACTGCCAAC +
Preference number: 5 (lower is better)
Translates to: HSWPVFLNAPTSGHLFRLRRGKA*AGRTAN
Trigger: GTTGGCAGTGCGGCCAGCCAAAGCTTTCCCCCTCCT...GAGCCTGAAGAGGTGGCCCGACGTTGGGGCATTCAGAAAAACAGGCCAGCTATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS TCA 90 bp AGGGAGGTGAGCTGGGAAGGCCCGGTCAGGTTTCGGTGTATGAGTTaGGTTTGGAGATGCATGATGCAGTGGGGACACTGGCGTGCTGGA +
Preference number: 5 (lower is better)
Translates to: REVSWEGPVRFRCMS*VWRCMMQWGHWRAG
Trigger: TCCAGCACGCCAGTGTCCCCACTGCATCATGCATCTCCAAACTCAACTCATACACCGAAACCTGACCGGGCCTTCCCAGCTCACCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000403685.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
ENST00000438956.5
ENST00000443137.5
ENST00000472931.6
ENST00000476355.5
ENST00000476720.6
ENST00000497115.5
CDS TCA 90 bp CACTCTCGATGTTTCCCTGCGCGGTCGGTGTACCCCGGGCAGCTCTaGTTCGCAAACGTGTGCAAAACTAGCAATGGCGATCAACGAGAC +
Preference number: 5 (lower is better)
Translates to: HSRCFPARSVYPGQL*FANVCKTSNGDQRD
Trigger: GTCTCGTTGATCGCCATTGCTAGTTTTGCACACGTTTGCGAATCAGAGCTGCCCGGGGTACACCGACCGCGCAGGGAAACATCGAGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430479.6
ENST00000433547.1
ENST00000443137.5
ENST00000485475.1
CDS CCA 90 bp AAATCTGTGGTCCATGGGGTAGCTGCTATCTGGTATGGACTGCGATaGAGGGAGGTGAGCTGGGAAGGCCCGGTCAGGTTTCGGTGTATG +
Preference number: 5 (lower is better)
Translates to: KSVVHGVAAIWYGLR*REVSWEGPVRFRCM
Trigger: CATACACCGAAACCTGACCGGGCCTTCCCAGCTCACCTCCCTCCATCGCAGTCCATACCAGATAGCAGCTACCCCATGGACCACAGATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000403685.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
ENST00000438956.5
ENST00000443137.5
ENST00000472931.6
ENST00000476720.6
ENST00000497115.5
CDS CCA 90 bp AAGCCTTGTGGTGGGAAGGGGATGTTTGGCTCAGACATCTGGCGTTaGTACATAGGACGTCCTTCCCTTGGCATCGTCGGCAAAGGAGGA +
Preference number: 5 (lower is better)
Translates to: KPCGGKGMFGSDIWR*YIGRPSLGIVGKGG
Trigger: TCCTCCTTTGCCGACGATGCCAAGGGAAGGACGTCCTATGTACCAACGCCAGATGTCTGAGCCAAACATCCCCTTCCCACCACAAGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000403685.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
ENST00000438956.5
ENST00000443137.5
ENST00000443608.5
ENST00000472931.6
ENST00000476720.6
CDS CCA 90 bp CTGGCCGCACTGCCAACCATGGTGTTGTGTTCATACACTGGGTCGTaGTACTCCTGCTTAAAGCCTTGTGGTGGGAAGGGGATGTTTGGC +
Preference number: 5 (lower is better)
Translates to: LAALPTMVLCSYTGS*YSCLKPCGGKGMFG
Trigger: GCCAAACATCCCCTTCCCACCACAAGGCTTTAAGCAGGAGTACCACGACCCAGTGTATGAACACAACACCATGGTTGGCAGTGCGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000403685.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
ENST00000438956.5
ENST00000443137.5
ENST00000443608.5
ENST00000472931.6
ENST00000476720.6
CDS CCA 90 bp GCTTTGGCTGGCCGCACTGCCAACCATGGTGTTGTGTTCATACACTaGGTCGTGGTACTCCTGCTTAAAGCCTTGTGGTGGGAAGGGGAT +
Preference number: 5 (lower is better)
Translates to: ALAGRTANHGVVFIH*VVVLLLKALWWEGD
Trigger: ATCCCCTTCCCACCACAAGGCTTTAAGCAGGAGTACCACGACCCAGTGTATGAACACAACACCATGGTTGGCAGTGCGGCCAGCCAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000403685.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
ENST00000438956.5
ENST00000443137.5
ENST00000443608.5
ENST00000472931.6
ENST00000476720.6
CDS-3UTR CAA 90 bp CATAGCTGGCCTGTTTTTCTGAATGCCCCAACGTCGGGCCACCTCTTCAGGCTCCTCAGACATCTGGCGTaGGTACATAGGACGTCCTTC +
Preference number: 5 (lower is better)
Translates to: HSWPVFLNAPTSGHLFRLLRHLA*VHRTSF
Trigger: GAAGGACGTCCTATGTACCAACGCCAGATGTCTGAG...GAGCCTGAAGAGGTGGCCCGACGTTGGGGCATTCAGAAAAACAGGCCAGCTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS TCA 90 bp GGTGGTTTTTCCTCTACTTCTCCTCCAGGGGCCTCCAATCCAAACTaGTGGATCGCTGCCTCCCATTGGCTCCGCGTCTCTTTCACAAGA +
Preference number: 5 (lower is better)
Translates to: GGFSSTSPPGASNPN*WIAASHWLRVSFTR
Trigger: TCTTGTGAAAGAGACGCGGAGCCAATGGGAGGCAGCGATCCATCAGTTTGGATTGGAGGCCCCTGGAGGAGAAGTAGAGGAAAAACCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405218.6
ENST00000485475.1
CDS GCA 90 bp GCTCGGGTTTCAAGGACAATAACTAGGACGTTAAGCAGTGAGGGCTaGATCTCTGAAGCCACTTGCCCTGATCCTCCTTCTCTGCAGCCC +
Preference number: 5 (lower is better)
Translates to: ARVSRTITRTLSSEG*ISEATCPDPPSLQP
Trigger: GGGCTGCAGAGAAGGAGGATCAGGGCAAGTGGCTTCAGAGATGCAGCCCTCACTGCTTAACGTCCTAGTTATTGTCCTTGAAACCCGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242066.9
ENST00000431887.5
CDS GCA 90 bp CTCTACTTCTCCTCCAGGGGCCTCCAATCCAAACTGATGGATCGCTaGCTCCCATTGGCTCCGCGTCTCTTTCACAAGATCAGATTTCGG +
Preference number: 5 (lower is better)
Translates to: LYFSSRGLQSKLMDR*LPLAPRLFHKIRFR
Trigger: CCGAAATCTGATCTTGTGAAAGAGACGCGGAGCCAATGGGAGGCAGCGATCCATCAGTTTGGATTGGAGGCCCCTGGAGGAGAAGTAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405218.6
ENST00000485475.1
CDS CCA 90 bp GTCGTGGTACTCCTGCTTAAAGCCTTGTGGTGGGAAGGGGATGTTTaGCTCAGACATCTGGCGTTGGTACATAGGACGTCCTTCCCTTGG +
Preference number: 5 (lower is better)
Translates to: VVVLLLKALWWEGDV*LRHLALVHRTSFPW
Trigger: CCAAGGGAAGGACGTCCTATGTACCAACGCCAGATGTCTGAGCCAAACATCCCCTTCCCACCACAAGGCTTTAAGCAGGAGTACCACGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000403685.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
ENST00000438956.5
ENST00000443137.5
ENST00000443608.5
ENST00000472931.6
ENST00000476720.6
CDS-3UTR CAA 90 bp CCCTTCCGGCATGTAGGCCATGCTCTCATCAAAGTGAGAAAGAGGCACTGTGTCGTGGGAAGGGGATGTTaGGCTCAGACATCTGGCGTT +
Preference number: 5 (lower is better)
Translates to: PFRHVGHALIKVRKRHCVVGRGC*AQTSGV
Trigger: AACGCCAGATGTCTGAGCCAAACATCCCCTTCCCAC...GACACAGTGCCTCTTTCTCACTTTGATGAGAGCATGGCCTACATGCCGGAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR CAA 90 bp TGGCCTGTTTTTCTGAATGCCCCAACGTCGGGCCACCTCTTCAGGCTCAATCAGCTCCTGCTTAAAGCCTaGTGGTGGGAAGGGGATGTT +
Preference number: 5 (lower is better)
Translates to: WPVFLNAPTSGHLFRLNQLLLKA*WWEGDV
Trigger: AACATCCCCTTCCCACCACAAGGCTTTAAGCAGGAG...CTGATTGAGCCTGAAGAGGTGGCCCGACGTTGGGGCATTCAGAAAAACAGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS GCA 90 bp TCCGAACAAGAGGCGATGTATTTATTTACACTCTCGATGTTTCCCTaGGCGGTCGGTGTACCCCGGGCAGCTCTGATTCGCAAACGTGTG +
Preference number: 5 (lower is better)
Translates to: SEQEAMYLFTLSMFP*AVGVPRAALIRKRV
Trigger: CACACGTTTGCGAATCAGAGCTGCCCGGGGTACACCGACCGCGCAGGGAAACATCGAGAGTGTAAATAAATACATCGCCTCTTGTTCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430479.6
ENST00000433547.1
ENST00000443137.5
ENST00000485475.1
CDS CCA 90 bp TGCTTAAAGCCTTGTGGTGGGAAGGGGATGTTTGGCTCAGACATCTaGCGTTGGTACATAGGACGTCCTTCCCTTGGCATCGTCGGCAAA +
Preference number: 5 (lower is better)
Translates to: CLKPCGGKGMFGSDI*RWYIGRPSLGIVGK
Trigger: TTTGCCGACGATGCCAAGGGAAGGACGTCCTATGTACCAACGCCAGATGTCTGAGCCAAACATCCCCTTCCCACCACAAGGCTTTAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000403685.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
ENST00000438956.5
ENST00000443137.5
ENST00000443608.5
ENST00000472931.6
ENST00000476720.6
CDS-3UTR CAA 90 bp CATAGCTGGCCTGTTTTTCTGAATGCCCCAACGTCGGGCCACCTCTTCAGGCTCTTTAAAGGGCTGTTCTaGACTGCAGGCAGAGCTGAT +
Preference number: 5 (lower is better)
Translates to: HSWPVFLNAPTSGHLFRLFKGLF*TAGRAD
Trigger: ATCAGCTCTGCCTGCAGTCAAGAACAGCCCTTTAAA...GAGCCTGAAGAGGTGGCCCGACGTTGGGGCATTCAGAAAAACAGGCCAGCTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR CAA 90 bp CATAGCTGGCCTGTTTTTCTGAATGCCCCAACGTCGGGCCACCTCTTCAGGCTCTCAACGAGACTTGCTTaGCACCTAACGGGATGTACT +
Preference number: 5 (lower is better)
Translates to: HSWPVFLNAPTSGHLFRLSTRLA*HLTGCT
Trigger: AGTACATCCCGTTAGGTGCAAAGCAAGTCTCGTTGA...GAGCCTGAAGAGGTGGCCCGACGTTGGGGCATTCAGAAAAACAGGCCAGCTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS TCA 90 bp TGTTGCCTTTTTCTAATCTGCACAGGGACACTAGCAGGGATCAGGTaGGGATGTCCAATGGACAGCTTCGGAGGGAAGAACCAGGCTGGA +
Preference number: 5 (lower is better)
Translates to: CCLFLICTGTLAGIR*GCPMDSFGGKNQAG
Trigger: TCCAGCCTGGTTCTTCCCTCCGAAGCTGTCCATTGGACATCCTCACCTGATCCCTGCTAGTGTCCCTGTGCAGATTAGAAAAAGGCAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483075.1
CDS GCA 90 bp CTGCCAACCATGGTGTTGTGTTCATACACTGGGTCGTGGTACTCCTaGTTAAAGCCTTGTGGTGGGAAGGGGATGTTTGGCTCAGACATC +
Preference number: 5 (lower is better)
Translates to: LPTMVLCSYTGSWYS*LKPCGGKGMFGSDI
Trigger: GATGTCTGAGCCAAACATCCCCTTCCCACCACAAGGCTTTAAGCAGGAGTACCACGACCCAGTGTATGAACACAACACCATGGTTGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000403685.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
ENST00000438956.5
ENST00000443137.5
ENST00000443608.5
ENST00000472931.6
ENST00000476720.6
CDS CCA 90 bp GTGTTCATACACTGGGTCGTGGTACTCCTGCTTAAAGCCTTGTGGTaGGAAGGGGATGTTTGGCTCAGACATCTGGCGTTGGTACATAGG +
Preference number: 5 (lower is better)
Translates to: VFIHWVVVLLLKALW*EGDVWLRHLALVHR
Trigger: CCTATGTACCAACGCCAGATGTCTGAGCCAAACATCCCCTTCCCACCACAAGGCTTTAAGCAGGAGTACCACGACCCAGTGTATGAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000403685.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
ENST00000438956.5
ENST00000443137.5
ENST00000443608.5
ENST00000472931.6
ENST00000476720.6
CDS-3UTR CAA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGAGCCAGAGCCCAGGGTaGGGGGCGAGCGGTGAGATG +
Preference number: 5 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKSQSPG*GASGEM
Trigger: CATCTCACCGCTCGCCCCCAACCCTGGGCTCTGGCT...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000242066.9
CDS-3UTR CAA 90 bp TGTGACGTTCCATGTCTGTCTTCAGCAGTGGACGCTGATTATCTGGAAAGGCCAGGGCCTCATTCCCACTaGTGGCTTCTGATCATAGGC +
Preference number: 5 (lower is better)
Translates to: CDVPCLSSAVDADYLERPGPHSH*WLLIIG
Trigger: GCCTATGATCAGAAGCCACAAGTGGGAATGAGGCCC...TGGCCTTTCCAGATAATCAGCGTCCACTGCTGAAGACAGACATGGAACGTCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR CAA 90 bp GGTTGCAGCAGCCCCCTTCCGGCATGTAGGCCATGCTCTCATCAAAGTGAGAAAAGCCAGGAAGCCTTCTaGCCTCATATAAATGGAGTG +
Preference number: 5 (lower is better)
Translates to: GCSSPLPACRPCSHQSEKSQEAF*PHINGV
Trigger: CACTCCATTTATATGAGGCAAGAAGGCTTCCTGGCT...TTTCTCACTTTGATGAGAGCATGGCCTACATGCCGGAAGGGGGCTGCTGCAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS TCA 90 bp TTAATTATAGCCCAGCACTTCCCCCTTGGAAGCCGAAAGCGCCTCTaGCAGAGCTCAATTCGGTGGTTTTTCCTCTACTTCTCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: LIIAQHFPLGSRKRL*QSSIRWFFLYFSSR
Trigger: CCTGGAGGAGAAGTAGAGGAAAAACCACCGAATTGAGCTCTGTCAGAGGCGCTTTCGGCTTCCAAGGGGGAAGTGCTGGGCTATAATTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000405218.6
ENST00000485475.1
CDS CCA 90 bp GTTGTGTTCATACACTGGGTCGTGGTACTCCTGCTTAAAGCCTTGTaGTGGGAAGGGGATGTTTGGCTCAGACATCTGGCGTTGGTACAT +
Preference number: 5 (lower is better)
Translates to: VVFIHWVVVLLLKAL*WEGDVWLRHLALVH
Trigger: ATGTACCAACGCCAGATGTCTGAGCCAAACATCCCCTTCCCACCACAAGGCTTTAAGCAGGAGTACCACGACCCAGTGTATGAACACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000403685.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
ENST00000438956.5
ENST00000443137.5
ENST00000443608.5
ENST00000472931.6
ENST00000476720.6
CDS-3UTR CAA 90 bp CATAGCTGGCCTGTTTTTCTGAATGCCCCAACGTCGGGCCACCTCTTCAGGCTCGTTTCGGTGTATGAGTaGAGTTTGGAGATGCATGAT +
Preference number: 5 (lower is better)
Translates to: HSWPVFLNAPTSGHLFRLVSVYE*SLEMHD
Trigger: ATCATGCATCTCCAAACTCAACTCATACACCGAAAC...GAGCCTGAAGAGGTGGCCCGACGTTGGGGCATTCAGAAAAACAGGCCAGCTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR CAA 90 bp CTCATAAATGACAGGGGAAAATGCCCAAGGCAAATAGTCTCCAAGTGGATATTTTGTCAATCAGGCGGCTaGCTGCCCCTTCCCGCGGGT +
Preference number: 5 (lower is better)
Translates to: LINDRGKCPRQIVSKWIFCQSGG*LPLPAG
Trigger: ACCCGCGGGAAGGGGCAGCAAGCCGCCTGATTGACA...AAATATCCACTTGGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATTTATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000405218.6
CDS-3UTR CAA 90 bp CCCTTCCGGCATGTAGGCCATGCTCTCATCAAAGTGAGAAAGAGGCACTGTGTCGTGTATGAGTTGAGTTaGGAGATGCATGATGCAGTG +
Preference number: 5 (lower is better)
Translates to: PFRHVGHALIKVRKRHCVVYELS*EMHDAV
Trigger: CACTGCATCATGCATCTCCAAACTCAACTCATACAC...GACACAGTGCCTCTTTCTCACTTTGATGAGAGCATGGCCTACATGCCGGAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR CAA 90 bp CAGAATAAATGTTTAGATTACTCCCACCCACCCTCAAATAAAGTGCACAGTCCAAGGAGGGGGAAAGCTTaGGCTGGCCGCACTGCCAAC +
Preference number: 5 (lower is better)
Translates to: QNKCLDYSHPPSNKVHSPRRGKA*AGRTAN
Trigger: GTTGGCAGTGCGGCCAGCCAAAGCTTTCCCCCTCCT...TGGACTGTGCACTTTATTTGAGGGTGGGTGGGAGTAATCTAAACATTTATTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGAGGAGGGGGAAAGCTTaGGCTGGCCGCACTGCCAAC +
Preference number: 5 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKRRGKA*AGRTAN
Trigger: GTTGGCAGTGCGGCCAGCCAAAGCTTTCCCCCTCCT...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp CTCATAAATGACAGGGGAAAATGCCCAAGGCAAATAGTCTCCAAGTGGATATTTCCCAGCACTTCCCCCTaGGAAGCCGAAAGCGCCTCT +
Preference number: 5 (lower is better)
Translates to: LINDRGKCPRQIVSKWIFPSTSP*EAESAS
Trigger: AGAGGCGCTTTCGGCTTCCAAGGGGGAAGTGCTGGG...AAATATCCACTTGGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATTTATGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000405192.6
ENST00000405218.6
ENST00000430479.6
CDS-3UTR CAA 90 bp TGTGACGTTCCATGTCTGTCTTCAGCAGTGGACGCTGATTATCTGGAAAGGCCACCTAACGGGATGTACTaGACGCTTTCACTTCCTCTC +
Preference number: 5 (lower is better)
Translates to: CDVPCLSSAVDADYLERPPNGMY*TLSLPL
Trigger: GAGAGGAAGTGAAAGCGTCAAGTACATCCCGTTAGG...TGGCCTTTCCAGATAATCAGCGTCCACTGCTGAAGACAGACATGGAACGTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR CAA 90 bp CCCTTCCGGCATGTAGGCCATGCTCTCATCAAAGTGAGAAAGAGGCACTGTGTCATTCCTGGCTCTTGTTaGATGTCTCCTATGGTCAGT +
Preference number: 5 (lower is better)
Translates to: PFRHVGHALIKVRKRHCVIPGSC*MSPMVS
Trigger: ACTGACCATAGGAGACATCAAACAAGAGCCAGGAAT...GACACAGTGCCTCTTTCTCACTTTGATGAGAGCATGGCCTACATGCCGGAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS CCA 90 bp GCGACCCACAACCATGCAATTATCTGGAGAGACATAAAAAGTTGTTaGAAAGACCCACCTGAAGGCCACGCTAGGCGAAAGGCTGCAAAA +
Preference number: 5 (lower is better)
Translates to: ATHNHAIIWRDIKSC*KDPPEGHARRKAAK
Trigger: TTTTGCAGCCTTTCGCCTAGCGTGGCCTTCAGGTGGGTCTTTCCAACAACTTTTTATGTCTCTCCAGATAATTGCATGGTTGTGGGTCGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433547.1
CDS-3UTR CAA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACAGGAGGGGGAAAGCTTaGGCTGGCCGCACTGCCAAC +
Preference number: 5 (lower is better)
Translates to: RSVQKEMMDNISASTMSYRRGKA*AGRTAN
Trigger: GTTGGCAGTGCGGCCAGCCAAAGCTTTCCCCCTCCT...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp CCCTTCCGGCATGTAGGCCATGCTCTCATCAAAGTGAGAAAGAGGCACTGTGTCCTCTCCAGCCACCTTTaGCATAATTCCTTTCTCATA +
Preference number: 5 (lower is better)
Translates to: PFRHVGHALIKVRKRHCVLSSHL*HNSFLI
Trigger: TATGAGAAAGGAATTATGCAAAAGGTGGCTGGAGAG...GACACAGTGCCTCTTTCTCACTTTGATGAGAGCATGGCCTACATGCCGGAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR CAA 90 bp ATAGTTCATAGCTGGCCTGTTTTTCTGAATGCCCCAACGTCGGGCCACCTCTTCGCAAAAACGCCCTGCTaGACTGTCACTTGTGTTAAT +
Preference number: 5 (lower is better)
Translates to: IVHSWPVFLNAPTSGHLFAKTPC*TVTCVN
Trigger: ATTAACACAAGTGACAGTCAAGCAGGGCGTTTTTGC...GAAGAGGTGGCCCGACGTTGGGGCATTCAGAAAAACAGGCCAGCTATGAACTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS GCA 90 bp GATTCGCAAACGTGTGCAAAACTAGCAATGGCGATCAACGAGACTTaGTTTGCACCTAACGGGACTAAAGAGACGGAGACACCTCTTTCA +
Preference number: 5 (lower is better)
Translates to: DSQTCAKLAMAINET*FAPNGTKETETPLS
Trigger: TGAAAGAGGTGTCTCCGTCTCTTTAGTCCCGTTAGGTGCAAAGCAAGTCTCGTTGATCGCCATTGCTAGTTTTGCACACGTTTGCGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433547.1
CDS-3UTR CAA 90 bp CAAAGGGACTTGGCACACGTCATTAAGTTAAGGATCTTGAGATGGAGAGATTGTGGGCCTCATTCCCACTaGTGGCTTCTGATCATAGGC +
Preference number: 5 (lower is better)
Translates to: QRDLAHVIKLRILRWRDCGPHSH*WLLIIG
Trigger: GCCTATGATCAGAAGCCACAAGTGGGAATGAGGCCC...ACAATCTCTCCATCTCAAGATCCTTAACTTAATGACGTGTGCCAAGTCCCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000242066.9
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp CAAAGGGACTTGGCACACGTCATTAAGTTAAGGATCTTGAGATGGAGAGATTGTGTGGGAAGGGGATGTTaGGCTCAGACATCTGGCGTT +
Preference number: 5 (lower is better)
Translates to: QRDLAHVIKLRILRWRDCVGRGC*AQTSGV
Trigger: AACGCCAGATGTCTGAGCCAAACATCCCCTTCCCAC...ACAATCTCTCCATCTCAAGATCCTTAACTTAATGACGTGTGCCAAGTCCCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGAGGAGGGGGAAAGCTTaGGCTGGCCGCACTGCCAAC +
Preference number: 5 (lower is better)
Translates to: IYRSVQKEMMDNISASTMRRGKA*AGRTAN
Trigger: GTTGGCAGTGCGGCCAGCCAAAGCTTTCCCCCTCCT...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp GAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAGATTGAAAGGAGGGGGAAAGCTTaGGCTGGCCGCACTGCCAAC +
Preference number: 5 (lower is better)
Translates to: EGNLTIVEEYVTMEAEIERRGKA*AGRTAN
Trigger: GTTGGCAGTGCGGCCAGCCAAAGCTTTCCCCCTCCT...TTCAATCTCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTCCCAGCACTTCCCCCTaGGAAGCCGAAAGCGCCTCT +
Preference number: 5 (lower is better)
Translates to: MDNISASTMSYSNFLIFFPSTSP*EAESAS
Trigger: AGAGGCGCTTTCGGCTTCCAAGGGGGAAGTGCTGGG...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000405192.6
ENST00000405218.6
ENST00000430479.6
CDS-3UTR CAA 90 bp CTCATAAATGACAGGGGAAAATGCCCAAGGCAAATAGTCTCCAAGTGGATATTTGGGCCTCATTCCCACTaGTGGCTTCTGATCATAGGC +
Preference number: 5 (lower is better)
Translates to: LINDRGKCPRQIVSKWIFGPHSH*WLLIIG
Trigger: GCCTATGATCAGAAGCCACAAGTGGGAATGAGGCCC...AAATATCCACTTGGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATTTATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp GAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGACTCAGACATCTGGCGTaGGTACATAGGACGTCCTTC +
Preference number: 5 (lower is better)
Translates to: EAGRKFDYSRRVCDHGSRLRHLA*VHRTSF
Trigger: GAAGGACGTCCTATGTACCAACGCCAGATGTCTGAG...TCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp CAGAATAAATGTTTAGATTACTCCCACCCACCCTCAAATAAAGTGCACAGTCCAGTGGGAAGGGGATGTTaGGCTCAGACATCTGGCGTT +
Preference number: 5 (lower is better)
Translates to: QNKCLDYSHPPSNKVHSPVGRGC*AQTSGV
Trigger: AACGCCAGATGTCTGAGCCAAACATCCCCTTCCCAC...TGGACTGTGCACTTTATTTGAGGGTGGGTGGGAGTAATCTAAACATTTATTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp TGTGACGTTCCATGTCTGTCTTCAGCAGTGGACGCTGATTATCTGGAAAGGCCAATACATTCCTGGCTCTaGTTTGATGTCTCCTATGGT +
Preference number: 5 (lower is better)
Translates to: CDVPCLSSAVDADYLERPIHSWL*FDVSYG
Trigger: ACCATAGGAGACATCAAACAAGAGCCAGGAATGTAT...TGGCCTTTCCAGATAATCAGCGTCCACTGCTGAAGACAGACATGGAACGTCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443137.5
CDS-3UTR CAA 90 bp CCTTGCTTGAATCTTTTAGCGAGCTATTCAGAGATTCTATATCCCCATTTACTCGGGCCTCATTCCCACTaGTGGCTTCTGATCATAGGC +
Preference number: 5 (lower is better)
Translates to: PCLNLLASYSEILYPHLLGPHSH*WLLIIG
Trigger: GCCTATGATCAGAAGCCACAAGTGGGAATGAGGCCC...GAGTAAATGGGGATATAGAATCTCTGAATAGCTCGCTAAAAGATTCAAGCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGCTCAGACATCTGGCGTaGGTACATAGGACGTCCTTC +
Preference number: 5 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKLRHLA*VHRTSF
Trigger: GAAGGACGTCCTATGTACCAACGCCAGATGTCTGAG...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACGTGGGAAGGGGATGTTaGGCTCAGACATCTGGCGTT +
Preference number: 5 (lower is better)
Translates to: RSVQKEMMDNISASTMSYVGRGC*AQTSGV
Trigger: AACGCCAGATGTCTGAGCCAAACATCCCCTTCCCAC...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGCTCCTGCTTAAAGCCTaGTGGTGGGAAGGGGATGTT +
Preference number: 5 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKLLLKA*WWEGDV
Trigger: AACATCCCCTTCCCACCACAAGGCTTTAAGCAGGAG...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp CAAAGGGACTTGGCACACGTCATTAAGTTAAGGATCTTGAGATGGAGAGATTGTCGCCAGAGTCCAAAATaGTGCCCCTCATTTACAGTC +
Preference number: 5 (lower is better)
Translates to: QRDLAHVIKLRILRWRDCRQSPK*CPSFTV
Trigger: GACTGTAAATGAGGGGCACAATTTTGGACTCTGGCG...ACAATCTCTCCATCTCAAGATCCTTAACTTAATGACGTGTGCCAAGTCCCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTGATCGCTGCCTCCCATaGGCTCCGCGTCTCTTTCAC +
Preference number: 5 (lower is better)
Translates to: VMVIIQLQRELPILWLSSDRCLP*APRLFH
Trigger: GTGAAAGAGACGCGGAGCCAATGGGAGGCAGCGATC...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405218.6
CDS GCA 90 bp CGGAGACACCTCTTTCATCAGGATAGTTTTTGCGACCCACAACCATaGAATTATCTGGAGAGACATAAAAAGTTGTTGGAAAGACCCACC +
Preference number: 5 (lower is better)
Translates to: RRHLFHQDSFCDPQP*NYLERHKKLLERPT
Trigger: GGTGGGTCTTTCCAACAACTTTTTATGTCTCTCCAGATAATTGCATGGTTGTGGGTCGCAAAAACTATCCTGATGAAAGAGGTGTCTCCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433547.1
CDS-3UTR CAA 90 bp GAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGATTTAAAGGGCTGTTCTaGACTGCAGGCAGAGCTGAT +
Preference number: 5 (lower is better)
Translates to: EAGRKFDYSRRVCDHGSRFKGLF*TAGRAD
Trigger: ATCAGCTCTGCCTGCAGTCAAGAACAGCCCTTTAAA...TCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACCTCAGACATCTGGCGTaGGTACATAGGACGTCCTTC +
Preference number: 5 (lower is better)
Translates to: RSVQKEMMDNISASTMSYLRHLA*VHRTSF
Trigger: GAAGGACGTCCTATGTACCAACGCCAGATGTCTGAG...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGGTGGGAAGGGGATGTTaGGCTCAGACATCTGGCGTT +
Preference number: 5 (lower is better)
Translates to: IYRSVQKEMMDNISASTMVGRGC*AQTSGV
Trigger: AACGCCAGATGTCTGAGCCAAACATCCCCTTCCCAC...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTGTGGGAAGGGGATGTTaGGCTCAGACATCTGGCGTT +
Preference number: 5 (lower is better)
Translates to: MDNISASTMSYSNFLIFFVGRGC*AQTSGV
Trigger: AACGCCAGATGTCTGAGCCAAACATCCCCTTCCCAC...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp GAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAGATTGAAGTGGGAAGGGGATGTTaGGCTCAGACATCTGGCGTT +
Preference number: 5 (lower is better)
Translates to: EGNLTIVEEYVTMEAEIEVGRGC*AQTSGV
Trigger: AACGCCAGATGTCTGAGCCAAACATCCCCTTCCCAC...TTCAATCTCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGCGCCAGAGTCCAAAATaGTGCCCCTCATTTACAGTC +
Preference number: 5 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKRQSPK*CPSFTV
Trigger: GACTGTAAATGAGGGGCACAATTTTGGACTCTGGCG...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp CTCATAAATGACAGGGGAAAATGCCCAAGGCAAATAGTCTCCAAGTGGATATTTCGCCAGAGTCCAAAATaGTGCCCCTCATTTACAGTC +
Preference number: 5 (lower is better)
Translates to: LINDRGKCPRQIVSKWIFRQSPK*CPSFTV
Trigger: GACTGTAAATGAGGGGCACAATTTTGGACTCTGGCG...AAATATCCACTTGGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATTTATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS GCA 90 bp ACGGGACTAAAGAGACGGAGACACCTCTTTCATCAGGATAGTTTTTaGGACCCACAACCATGCAATTATCTGGAGAGACATAAAAAGTTG +
Preference number: 5 (lower is better)
Translates to: TGLKRRRHLFHQDSF*DPQPCNYLERHKKL
Trigger: CAACTTTTTATGTCTCTCCAGATAATTGCATGGTTGTGGGTCGCAAAAACTATCCTGATGAAAGAGGTGTCTCCGTCTCTTTAGTCCCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433547.1
CDS CCA 90 bp TCTTTCATCAGGATAGTTTTTGCGACCCACAACCATGCAATTATCTaGAGAGACATAAAAAGTTGTTGGAAAGACCCACCTGAAGGCCAC +
Preference number: 5 (lower is better)
Translates to: SFIRIVFATHNHAII*RDIKSCWKDPPEGH
Trigger: GTGGCCTTCAGGTGGGTCTTTCCAACAACTTTTTATGTCTCTCCAGATAATTGCATGGTTGTGGGTCGCAAAAACTATCCTGATGAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433547.1
CDS-3UTR CAA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGTTTAAAGGGCTGTTCTaGACTGCAGGCAGAGCTGAT +
Preference number: 5 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKFKGLF*TAGRAD
Trigger: ATCAGCTCTGCCTGCAGTCAAGAACAGCCCTTTAAA...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp CAGAATAAATGTTTAGATTACTCCCACCCACCCTCAAATAAAGTGCACAGTCCATTTAAAGGGCTGTTCTaGACTGCAGGCAGAGCTGAT +
Preference number: 5 (lower is better)
Translates to: QNKCLDYSHPPSNKVHSPFKGLF*TAGRAD
Trigger: ATCAGCTCTGCCTGCAGTCAAGAACAGCCCTTTAAA...TGGACTGTGCACTTTATTTGAGGGTGGGTGGGAGTAATCTAAACATTTATTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp TTGAGTCATCTATTTTGTCCTGAAATGCTATCTGTAGTTAACTGCACTGCTTATGGGCCTCATTCCCACTaGTGGCTTCTGATCATAGGC +
Preference number: 5 (lower is better)
Translates to: LSHLFCPEMLSVVNCTAYGPHSH*WLLIIG
Trigger: GCCTATGATCAGAAGCCACAAGTGGGAATGAGGCCC...ATAAGCAGTGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTGGGCCTCATTCCCACTaGTGGCTTCTGATCATAGGC +
Preference number: 5 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISGPHSH*WLLIIG
Trigger: GCCTATGATCAGAAGCCACAAGTGGGAATGAGGCCC...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTCTCAGACATCTGGCGTaGGTACATAGGACGTCCTTC +
Preference number: 5 (lower is better)
Translates to: MDNISASTMSYSNFLIFFLRHLA*VHRTSF
Trigger: GAAGGACGTCCTATGTACCAACGCCAGATGTCTGAG...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTGTGGGAAGGGGATGTTaGGCTCAGACATCTGGCGTT +
Preference number: 5 (lower is better)
Translates to: VMVIIQLQRELPILWLSSVGRGC*AQTSGV
Trigger: AACGCCAGATGTCTGAGCCAAACATCCCCTTCCCAC...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGCTCCTGCTTAAAGCCTaGTGGTGGGAAGGGGATGTT +
Preference number: 5 (lower is better)
Translates to: IYRSVQKEMMDNISASTMLLLKA*WWEGDV
Trigger: AACATCCCCTTCCCACCACAAGGCTTTAAGCAGGAG...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTCTCCTGCTTAAAGCCTaGTGGTGGGAAGGGGATGTT +
Preference number: 5 (lower is better)
Translates to: MDNISASTMSYSNFLIFFLLLKA*WWEGDV
Trigger: AACATCCCCTTCCCACCACAAGGCTTTAAGCAGGAG...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp CAGAATAAATGTTTAGATTACTCCCACCCACCCTCAAATAAAGTGCACAGTCCAAGCCAGGAAGCCTTCTaGCCTCATATAAATGGAGTG +
Preference number: 5 (lower is better)
Translates to: QNKCLDYSHPPSNKVHSPSQEAF*PHINGV
Trigger: CACTCCATTTATATGAGGCAAGAAGGCTTCCTGGCT...TGGACTGTGCACTTTATTTGAGGGTGGGTGGGAGTAATCTAAACATTTATTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp CTCATAAATGACAGGGGAAAATGCCCAAGGCAAATAGTCTCCAAGTGGATATTTAGCCAGGAAGCCTTCTaGCCTCATATAAATGGAGTG +
Preference number: 5 (lower is better)
Translates to: LINDRGKCPRQIVSKWIFSQEAF*PHINGV
Trigger: CACTCCATTTATATGAGGCAAGAAGGCTTCCTGGCT...AAATATCCACTTGGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATTTATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGAGCCAGGAAGCCTTCTaGCCTCATATAAATGGAGTG +
Preference number: 5 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKSQEAF*PHINGV
Trigger: CACTCCATTTATATGAGGCAAGAAGGCTTCCTGGCT...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp CCTTGCTTGAATCTTTTAGCGAGCTATTCAGAGATTCTATATCCCCATTTACTCCGCCAGAGTCCAAAATaGTGCCCCTCATTTACAGTC +
Preference number: 5 (lower is better)
Translates to: PCLNLLASYSEILYPHLLRQSPK*CPSFTV
Trigger: GACTGTAAATGAGGGGCACAATTTTGGACTCTGGCG...GAGTAAATGGGGATATAGAATCTCTGAATAGCTCGCTAAAAGATTCAAGCAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp CAAAGGGACTTGGCACACGTCATTAAGTTAAGGATCTTGAGATGGAGAGATTGTCTCTTAAGGCTTCTTTaGAACTTCTGCCTCCAGAAC +
Preference number: 5 (lower is better)
Translates to: QRDLAHVIKLRILRWRDCLLRLL*NFCLQN
Trigger: GTTCTGGAGGCAGAAGTTCAAAAGAAGCCTTAAGAG...ACAATCTCTCCATCTCAAGATCCTTAACTTAATGACGTGTGCCAAGTCCCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp GAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGACTCTTAAGGCTTCTTTaGAACTTCTGCCTCCAGAAC +
Preference number: 5 (lower is better)
Translates to: EAGRKFDYSRRVCDHGSRLLRLL*NFCLQN
Trigger: GTTCTGGAGGCAGAAGTTCAAAAGAAGCCTTAAGAG...TCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS GCA 90 bp AATCTTGAAGCATCCCGTCCTGATGAACCCAGAGAAACTAATTTCTaGCATCAGAAAAGTCCTCCACCAGAACACCAAATAATGATATGC +
Preference number: 5 (lower is better)
Translates to: NLEASRPDEPRETNF*HQKSPPPEHQIMIC
Trigger: GCATATCATTATTTGGTGTTCTGGTGGAGGACTTTTCTGATGGCAGAAATTAGTTTCTCTGGGTTCATCAGGACGGGATGCTTCAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399357.7
ENST00000403527.5
ENST00000420159.6
ENST00000438956.5
ENST00000443608.5
CDS-3UTR CAA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACTTTAAAGGGCTGTTCTaGACTGCAGGCAGAGCTGAT +
Preference number: 5 (lower is better)
Translates to: RSVQKEMMDNISASTMSYFKGLF*TAGRAD
Trigger: ATCAGCTCTGCCTGCAGTCAAGAACAGCCCTTTAAA...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp CCTTGCTTGAATCTTTTAGCGAGCTATTCAGAGATTCTATATCCCCATTTACTCTTTAAAGGGCTGTTCTaGACTGCAGGCAGAGCTGAT +
Preference number: 5 (lower is better)
Translates to: PCLNLLASYSEILYPHLLFKGLF*TAGRAD
Trigger: ATCAGCTCTGCCTGCAGTCAAGAACAGCCCTTTAAA...GAGTAAATGGGGATATAGAATCTCTGAATAGCTCGCTAAAAGATTCAAGCAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGGTGTATGAGTTGAGTTaGGAGATGCATGATGCAGTG +
Preference number: 5 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKVYELS*EMHDAV
Trigger: CACTGCATCATGCATCTCCAAACTCAACTCATACAC...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp CTCATAAATGACAGGGGAAAATGCCCAAGGCAAATAGTCTCCAAGTGGATATTTGTGTATGAGTTGAGTTaGGAGATGCATGATGCAGTG +
Preference number: 5 (lower is better)
Translates to: LINDRGKCPRQIVSKWIFVYELS*EMHDAV
Trigger: CACTGCATCATGCATCTCCAAACTCAACTCATACAC...AAATATCCACTTGGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATTTATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp CAGAATAAATGTTTAGATTACTCCCACCCACCCTCAAATAAAGTGCACAGTCCAGTGTATGAGTTGAGTTaGGAGATGCATGATGCAGTG +
Preference number: 5 (lower is better)
Translates to: QNKCLDYSHPPSNKVHSPVYELS*EMHDAV
Trigger: CACTGCATCATGCATCTCCAAACTCAACTCATACAC...TGGACTGTGCACTTTATTTGAGGGTGGGTGGGAGTAATCTAAACATTTATTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTCTCCTGCTTAAAGCCTaGTGGTGGGAAGGGGATGTT +
Preference number: 5 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISLLLKA*WWEGDV
Trigger: AACATCCCCTTCCCACCACAAGGCTTTAAGCAGGAG...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp TTGAGTCATCTATTTTGTCCTGAAATGCTATCTGTAGTTAACTGCACTGCTTATCTCCTGCTTAAAGCCTaGTGGTGGGAAGGGGATGTT +
Preference number: 5 (lower is better)
Translates to: LSHLFCPEMLSVVNCTAYLLLKA*WWEGDV
Trigger: AACATCCCCTTCCCACCACAAGGCTTTAAGCAGGAG...ATAAGCAGTGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACAGCCAGGAAGCCTTCTaGCCTCATATAAATGGAGTG +
Preference number: 5 (lower is better)
Translates to: RSVQKEMMDNISASTMSYSQEAF*PHINGV
Trigger: CACTCCATTTATATGAGGCAAGAAGGCTTCCTGGCT...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp GAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAATACATTCCTGGCTCTaGTTTGATGTCTCCATCGAA +
Preference number: 5 (lower is better)
Translates to: EAGRKFDYSRRVCDHGSRIHSWL*FDVSIE
Trigger: TTCGATGGAGACATCAAACAAGAGCCAGGAATGTAT...TCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp GAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGACTCTCCAGCCACCTTTaGCATAATTCCTTTCTCATA +
Preference number: 5 (lower is better)
Translates to: EAGRKFDYSRRVCDHGSRLSSHL*HNSFLI
Trigger: TATGAGAAAGGAATTATGCAAAAGGTGGCTGGAGAG...TCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp CTCATAAATGACAGGGGAAAATGCCCAAGGCAAATAGTCTCCAAGTGGATATTTGCAAAAACGCCCTGCTaGACTGTCACTTGTGTTAAT +
Preference number: 5 (lower is better)
Translates to: LINDRGKCPRQIVSKWIFAKTPC*TVTCVN
Trigger: ATTAACACAAGTGACAGTCAAGCAGGGCGTTTTTGC...AAATATCCACTTGGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATTTATGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp CAGAATAAATGTTTAGATTACTCCCACCCACCCTCAAATAAAGTGCACAGTCCAGCAAAAACGCCCTGCTaGACTGTCACTTGTGTTAAT +
Preference number: 5 (lower is better)
Translates to: QNKCLDYSHPPSNKVHSPAKTPC*TVTCVN
Trigger: ATTAACACAAGTGACAGTCAAGCAGGGCGTTTTTGC...TGGACTGTGCACTTTATTTGAGGGTGGGTGGGAGTAATCTAAACATTTATTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGGCAAAAACGCCCTGCTaGACTGTCACTTGTGTTAAT +
Preference number: 5 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKAKTPC*TVTCVN
Trigger: ATTAACACAAGTGACAGTCAAGCAGGGCGTTTTTGC...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp CAAAGGGACTTGGCACACGTCATTAAGTTAAGGATCTTGAGATGGAGAGATTGTAGATCCGCCCATGATTaGAGAAAAATGTTCTGCACT +
Preference number: 5 (lower is better)
Translates to: QRDLAHVIKLRILRWRDCRSAHD*RKMFCT
Trigger: AGTGCAGAACATTTTTCTCAAATCATGGGCGGATCT...ACAATCTCTCCATCTCAAGATCCTTAACTTAATGACGTGTGCCAAGTCCCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTGTAACCCGCTGCTTATaGTTAAGGCGCCTGGGGATA +
Preference number: 5 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISVTRCL*LRRLGI
Trigger: TATCCCCAGGCGCCTTAACAATAAGCAGCGGGTTAC...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000405218.6
CDS-3UTR CAA 90 bp TATAAGAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAATCAACGAGACTTGCTTaGCACCTAACGGGACTGAAG +
Preference number: 5 (lower is better)
Translates to: YKRQEGNLTIVEEYVTMESTRLA*HLTGLK
Trigger: CTTCAGTCCCGTTAGGTGCAAAGCAAGTCTCGTTGA...TTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTCTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430479.6
CDS-3UTR CAA 90 bp CCTTGCTTGAATCTTTTAGCGAGCTATTCAGAGATTCTATATCCCCATTTACTCGACCATGTAAGGCACTaGCTGGTCATAAAATCCATC +
Preference number: 5 (lower is better)
Translates to: PCLNLLASYSEILYPHLLDHVRH*LVIKSI
Trigger: GATGGATTTTATGACCAGCAAGTGCCTTACATGGTC...GAGTAAATGGGGATATAGAATCTCTGAATAGCTCGCTAAAAGATTCAAGCAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000242066.9
ENST00000405192.6
ENST00000430479.6
CDS-3UTR CAA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTTTTAAAGGGCTGTTCTaGACTGCAGGCAGAGCTGAT +
Preference number: 5 (lower is better)
Translates to: MDNISASTMSYSNFLIFFFKGLF*TAGRAD
Trigger: ATCAGCTCTGCCTGCAGTCAAGAACAGCCCTTTAAA...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTTTAAAGGGCTGTTCTaGACTGCAGGCAGAGCTGAT +
Preference number: 5 (lower is better)
Translates to: IYRSVQKEMMDNISASTMFKGLF*TAGRAD
Trigger: ATCAGCTCTGCCTGCAGTCAAGAACAGCCCTTTAAA...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp CTCATAAATGACAGGGGAAAATGCCCAAGGCAAATAGTCTCCAAGTGGATATTTGTTTCGGTGTATGAGTaGAGTTTGGAGATGCATGAT +
Preference number: 5 (lower is better)
Translates to: LINDRGKCPRQIVSKWIFVSVYE*SLEMHD
Trigger: ATCATGCATCTCCAAACTCAACTCATACACCGAAAC...AAATATCCACTTGGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATTTATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGAGCCAGGAAGCCTTCTaGCCTCATATAAATGGAGTG +
Preference number: 5 (lower is better)
Translates to: IYRSVQKEMMDNISASTMSQEAF*PHINGV
Trigger: CACTCCATTTATATGAGGCAAGAAGGCTTCCTGGCT...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp CTCATAAATGACAGGGGAAAATGCCCAAGGCAAATAGTCTCCAAGTGGATATTTATACATTCCTGGCTCTaGTTTGATGTCTCCATCGAA +
Preference number: 5 (lower is better)
Translates to: LINDRGKCPRQIVSKWIFIHSWL*FDVSIE
Trigger: TTCGATGGAGACATCAAACAAGAGCCAGGAATGTAT...AAATATCCACTTGGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATTTATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp CAGAATAAATGTTTAGATTACTCCCACCCACCCTCAAATAAAGTGCACAGTCCAATACATTCCTGGCTCTaGTTTGATGTCTCCATCGAA +
Preference number: 5 (lower is better)
Translates to: QNKCLDYSHPPSNKVHSPIHSWL*FDVSIE
Trigger: TTCGATGGAGACATCAAACAAGAGCCAGGAATGTAT...TGGACTGTGCACTTTATTTGAGGGTGGGTGGGAGTAATCTAAACATTTATTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp CTCATAAATGACAGGGGAAAATGCCCAAGGCAAATAGTCTCCAAGTGGATATTTCTCTCCAGCCACCTTTaGCATAATTCCTTTCTCATA +
Preference number: 5 (lower is better)
Translates to: LINDRGKCPRQIVSKWIFLSSHL*HNSFLI
Trigger: TATGAGAAAGGAATTATGCAAAAGGTGGCTGGAGAG...AAATATCCACTTGGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATTTATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACGCAAAAACGCCCTGCTaGACTGTCACTTGTGTTAAT +
Preference number: 5 (lower is better)
Translates to: RSVQKEMMDNISASTMSYAKTPC*TVTCVN
Trigger: ATTAACACAAGTGACAGTCAAGCAGGGCGTTTTTGC...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp CCTTGCTTGAATCTTTTAGCGAGCTATTCAGAGATTCTATATCCCCATTTACTCGCAAAAACGCCCTGCTaGACTGTCACTTGTGTTAAT +
Preference number: 5 (lower is better)
Translates to: PCLNLLASYSEILYPHLLAKTPC*TVTCVN
Trigger: ATTAACACAAGTGACAGTCAAGCAGGGCGTTTTTGC...GAGTAAATGGGGATATAGAATCTCTGAATAGCTCGCTAAAAGATTCAAGCAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTCGCCAGAGTCCAAAATaGTGCCCCTCATTTACAGTC +
Preference number: 5 (lower is better)
Translates to: VMVIIQLQRELPILWLSSRQSPK*CPSFTV
Trigger: GACTGTAAATGAGGGGCACAATTTTGGACTCTGGCG...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp TTGAGTCATCTATTTTGTCCTGAAATGCTATCTGTAGTTAACTGCACTGCTTATCGCCAGAGTCCAAAATaGTGCCCCTCATTTACAGTC +
Preference number: 5 (lower is better)
Translates to: LSHLFCPEMLSVVNCTAYRQSPK*CPSFTV
Trigger: GACTGTAAATGAGGGGCACAATTTTGGACTCTGGCG...ATAAGCAGTGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTCGCCAGAGTCCAAAATaGTGCCCCTCATTTACAGTC +
Preference number: 5 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISRQSPK*CPSFTV
Trigger: GACTGTAAATGAGGGGCACAATTTTGGACTCTGGCG...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp CAAAGGGACTTGGCACACGTCATTAAGTTAAGGATCTTGAGATGGAGAGATTGTCAAAATTCATGTCCCTaGCTTGAATCTTTTAGCGAG +
Preference number: 5 (lower is better)
Translates to: QRDLAHVIKLRILRWRDCQNSCP*LESFSE
Trigger: CTCGCTAAAAGATTCAAGCAAGGGACATGAATTTTG...ACAATCTCTCCATCTCAAGATCCTTAACTTAATGACGTGTGCCAAGTCCCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp CAGAATAAATGTTTAGATTACTCCCACCCACCCTCAAATAAAGTGCACAGTCCATGGTGTTTGGGTTTCTaGATAACTGCTCCACTTAGA +
Preference number: 5 (lower is better)
Translates to: QNKCLDYSHPPSNKVHSPWCLGF*ITAPLR
Trigger: TCTAAGTGGAGCAGTTATCAAGAAACCCAAACACCA...TGGACTGTGCACTTTATTTGAGGGTGGGTGGGAGTAATCTAAACATTTATTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGTGGTGTTTGGGTTTCTaGATAACTGCTCCACTTAGA +
Preference number: 5 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKWCLGF*ITAPLR
Trigger: TCTAAGTGGAGCAGTTATCAAGAAACCCAAACACCA...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp TATAAGAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAACGGCGAAATCTGACATaGTACAGGCACTTTTCTCCA +
Preference number: 5 (lower is better)
Translates to: YKRQEGNLTIVEEYVTMERRNLT*YRHFSP
Trigger: TGGAGAAAAGTGCCTGTACAATGTCAGATTTCGCCG...TTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTCTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399357.7
CDS-3UTR CAA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGGACCATGTAAGGCACTaGCTGGTCATAAAATCCATC +
Preference number: 5 (lower is better)
Translates to: IYRSVQKEMMDNISASTMDHVRH*LVIKSI
Trigger: GATGGATTTTATGACCAGCAAGTGCCTTACATGGTC...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000405192.6
ENST00000405218.6
ENST00000430479.6
CDS-3UTR CAA 90 bp CCTTGCTTGAATCTTTTAGCGAGCTATTCAGAGATTCTATATCCCCATTTACTCGTTTCGGTGTATGAGTaGAGTTTGGAGATGCATGAT +
Preference number: 5 (lower is better)
Translates to: PCLNLLASYSEILYPHLLVSVYE*SLEMHD
Trigger: ATCATGCATCTCCAAACTCAACTCATACACCGAAAC...GAGTAAATGGGGATATAGAATCTCTGAATAGCTCGCTAAAAGATTCAAGCAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTAGCCAGGAAGCCTTCTaGCCTCATATAAATGGAGTG +
Preference number: 5 (lower is better)
Translates to: VMVIIQLQRELPILWLSSSQEAF*PHINGV
Trigger: CACTCCATTTATATGAGGCAAGAAGGCTTCCTGGCT...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp CTCATAAATGACAGGGGAAAATGCCCAAGGCAAATAGTCTCCAAGTGGATATTTATTCCTGGCTCTTGTTaGATGTCTCCATCGAATTTT +
Preference number: 5 (lower is better)
Translates to: LINDRGKCPRQIVSKWIFIPGSC*MSPSNF
Trigger: AAAATTCGATGGAGACATCAAACAAGAGCCAGGAAT...AAATATCCACTTGGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATTTATGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGATTCCTGGCTCTTGTTaGATGTCTCCATCGAATTTT +
Preference number: 5 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKIPGSC*MSPSNF
Trigger: AAAATTCGATGGAGACATCAAACAAGAGCCAGGAAT...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACATACATTCCTGGCTCTaGTTTGATGTCTCCATCGAA +
Preference number: 5 (lower is better)
Translates to: RSVQKEMMDNISASTMSYIHSWL*FDVSIE
Trigger: TTCGATGGAGACATCAAACAAGAGCCAGGAATGTAT...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACCTCTCCAGCCACCTTTaGCATAATTCCTTTCTCATA +
Preference number: 5 (lower is better)
Translates to: RSVQKEMMDNISASTMSYLSSHL*HNSFLI
Trigger: TATGAGAAAGGAATTATGCAAAAGGTGGCTGGAGAG...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp CCTTGCTTGAATCTTTTAGCGAGCTATTCAGAGATTCTATATCCCCATTTACTCCTCTCCAGCCACCTTTaGCATAATTCCTTTCTCATA +
Preference number: 5 (lower is better)
Translates to: PCLNLLASYSEILYPHLLLSSHL*HNSFLI
Trigger: TATGAGAAAGGAATTATGCAAAAGGTGGCTGGAGAG...GAGTAAATGGGGATATAGAATCTCTGAATAGCTCGCTAAAAGATTCAAGCAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTGCAAAAACGCCCTGCTaGACTGTCACTTGTGTTAAT +
Preference number: 5 (lower is better)
Translates to: MDNISASTMSYSNFLIFFAKTPC*TVTCVN
Trigger: ATTAACACAAGTGACAGTCAAGCAGGGCGTTTTTGC...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp CAAAGGGACTTGGCACACGTCATTAAGTTAAGGATCTTGAGATGGAGAGATTGTAAAAGACGGTATGATTaGTATCTAAACAGCAAGGTG +
Preference number: 5 (lower is better)
Translates to: QRDLAHVIKLRILRWRDCKRRYD*YLNSKV
Trigger: CACCTTGCTGTTTAGATACAAATCATACCGTCTTTT...ACAATCTCTCCATCTCAAGATCCTTAACTTAATGACGTGTGCCAAGTCCCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGATTCATGTCCCTTGCTaGAATCTTTTAGCGAGCTAT +
Preference number: 5 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKIHVPC*NLLASY
Trigger: ATAGCTCGCTAAAAGATTCAAGCAAGGGACATGAAT...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp CAGAATAAATGTTTAGATTACTCCCACCCACCCTCAAATAAAGTGCACAGTCCAATTCATGTCCCTTGCTaGAATCTTTTAGCGAGCTAT +
Preference number: 5 (lower is better)
Translates to: QNKCLDYSHPPSNKVHSPIHVPC*NLLASY
Trigger: ATAGCTCGCTAAAAGATTCAAGCAAGGGACATGAAT...TGGACTGTGCACTTTATTTGAGGGTGGGTGGGAGTAATCTAAACATTTATTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp CTCATAAATGACAGGGGAAAATGCCCAAGGCAAATAGTCTCCAAGTGGATATTTCAAAATTCATGTCCCTaGCTTGAATCTTTTAGCGAG +
Preference number: 5 (lower is better)
Translates to: LINDRGKCPRQIVSKWIFQNSCP*LESFSE
Trigger: CTCGCTAAAAGATTCAAGCAAGGGACATGAATTTTG...AAATATCCACTTGGAGACTATTTGCCTTGGGCATTTTCCCCTGTCATTTATGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACTGGTGTTTGGGTTTCTaGATAACTGCTCCACTTAGA +
Preference number: 5 (lower is better)
Translates to: RSVQKEMMDNISASTMSYWCLGF*ITAPLR
Trigger: TCTAAGTGGAGCAGTTATCAAGAAACCCAAACACCA...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp GAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAATACCATTTCTGCCATaGTTCTCTTGTGATAACGTT +
Preference number: 5 (lower is better)
Translates to: EAGRKFDYSRRVCDHGSRIPFLP*FSCDNV
Trigger: AACGTTATCACAAGAGAACAATGGCAGAAATGGTAT...TCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp GAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAGATTGAACTCTTAAGGCTTCTTTaGAACTTCTGCCTCCAGAAC +
Preference number: 5 (lower is better)
Translates to: EGNLTIVEEYVTMEAEIELLRLL*NFCLQN
Trigger: GTTCTGGAGGCAGAAGTTCAAAAGAAGCCTTAAGAG...TTCAATCTCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp TTGAGTCATCTATTTTGTCCTGAAATGCTATCTGTAGTTAACTGCACTGCTTATGTGTATGAGTTGAGTTaGGAGATGCATGATGCAGTG +
Preference number: 5 (lower is better)
Translates to: LSHLFCPEMLSVVNCTAYVYELS*EMHDAV
Trigger: CACTGCATCATGCATCTCCAAACTCAACTCATACAC...ATAAGCAGTGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTGTGTATGAGTTGAGTTaGGAGATGCATGATGCAGTG +
Preference number: 5 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISVYELS*EMHDAV
Trigger: CACTGCATCATGCATCTCCAAACTCAACTCATACAC...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGGTTTCGGTGTATGAGTaGAGTTTGGAGATGCATGAT +
Preference number: 5 (lower is better)
Translates to: IYRSVQKEMMDNISASTMVSVYE*SLEMHD
Trigger: ATCATGCATCTCCAAACTCAACTCATACACCGAAAC...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACATTCCTGGCTCTTGTTaGATGTCTCCATCGAATTTT +
Preference number: 5 (lower is better)
Translates to: RSVQKEMMDNISASTMSYIPGSC*MSPSNF
Trigger: AAAATTCGATGGAGACATCAAACAAGAGCCAGGAAT...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTATACATTCCTGGCTCTaGTTTGATGTCTCCATCGAA +
Preference number: 5 (lower is better)
Translates to: MDNISASTMSYSNFLIFFIHSWL*FDVSIE
Trigger: TTCGATGGAGACATCAAACAAGAGCCAGGAATGTAT...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGATACATTCCTGGCTCTaGTTTGATGTCTCCATCGAA +
Preference number: 5 (lower is better)
Translates to: IYRSVQKEMMDNISASTMIHSWL*FDVSIE
Trigger: TTCGATGGAGACATCAAACAAGAGCCAGGAATGTAT...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp TTGAGTCATCTATTTTGTCCTGAAATGCTATCTGTAGTTAACTGCACTGCTTATGCAAAAACGCCCTGCTaGACTGTCACTTGTGTTAAT +
Preference number: 5 (lower is better)
Translates to: LSHLFCPEMLSVVNCTAYAKTPC*TVTCVN
Trigger: ATTAACACAAGTGACAGTCAAGCAGGGCGTTTTTGC...ATAAGCAGTGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp CAGAATAAATGTTTAGATTACTCCCACCCACCCTCAAATAAAGTGCACAGTCCAAAAAGACGGTATGATTaGTATCTAAACAGCAAGGTG +
Preference number: 5 (lower is better)
Translates to: QNKCLDYSHPPSNKVHSPKRRYD*YLNSKV
Trigger: CACCTTGCTGTTTAGATACAAATCATACCGTCTTTT...TGGACTGTGCACTTTATTTGAGGGTGGGTGGGAGTAATCTAAACATTTATTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGAAAAGACGGTATGATTaGTATCTAAACAGCAAGGTG +
Preference number: 5 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKKRRYD*YLNSKV
Trigger: CACCTTGCTGTTTAGATACAAATCATACCGTCTTTT...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACCAAAATTCATGTCCCTaGCTTGAATCTTTTAGCGAG +
Preference number: 5 (lower is better)
Translates to: RSVQKEMMDNISASTMSYQNSCP*LESFSE
Trigger: CTCGCTAAAAGATTCAAGCAAGGGACATGAATTTTG...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTTGGTGTTTGGGTTTCTaGATAACTGCTCCACTTAGA +
Preference number: 5 (lower is better)
Translates to: MDNISASTMSYSNFLIFFWCLGF*ITAPLR
Trigger: TCTAAGTGGAGCAGTTATCAAGAAACCCAAACACCA...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp CATGATATAGTTTCATCATACTCAAAACTTGTAGGACCCCATCCCAAGCCTAAGATACCATTTCTGCCATaGTTCTCTTGTGATAACGTT +
Preference number: 5 (lower is better)
Translates to: HDIVSSYSKLVGPHPKPKIPFLP*FSCDNV
Trigger: AACGTTATCACAAGAGAACAATGGCAGAAATGGTAT...CTTAGGCTTGGGATGGGGTCCTACAAGTTTTGAGTATGATGAAACTATATCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACTCTGCACTGTCAGTCTaGTGGATTTTTATTCTGAAG +
Preference number: 5 (lower is better)
Translates to: RSVQKEMMDNISASTMSYSALSV*WIFILK
Trigger: CTTCAGAATAAAAATCCACAAGACTGACAGTGCAGA...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp CCTTGCTTGAATCTTTTAGCGAGCTATTCAGAGATTCTATATCCCCATTTACTCTCTGCACTGTCAGTCTaGTGGATTTTTATTCTGAAG +
Preference number: 5 (lower is better)
Translates to: PCLNLLASYSEILYPHLLSALSV*WIFILK
Trigger: CTTCAGAATAAAAATCCACAAGACTGACAGTGCAGA...GAGTAAATGGGGATATAGAATCTCTGAATAGCTCGCTAAAAGATTCAAGCAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGAGATCCGCCCATGATTaGAGAAAAATGTTCTGCACT +
Preference number: 5 (lower is better)
Translates to: IYRSVQKEMMDNISASTMRSAHD*RKMFCT
Trigger: AGTGCAGAACATTTTTCTCAAATCATGGGCGGATCT...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTCTCTTAAGGCTTCTTTaGAACTTCTGCCTCCAGAAC +
Preference number: 5 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISLLRLL*NFCLQN
Trigger: GTTCTGGAGGCAGAAGTTCAAAAGAAGCCTTAAGAG...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp AGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCATACAAAGGTAAGCTCATTTaGAAGACTGGGCTTCTAGAA +
Preference number: 5 (lower is better)
Translates to: RSVQKEMMDNISASTMSYKGKLI*KTGLLE
Trigger: TTCTAGAAGCCCAGTCTTCAAAATGAGCTTACCTTT...GTATGACATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405358.8
CDS-3UTR CAA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTCCTCTTCCACTCATGTaGGGCACTTTAATCAGAAAA +
Preference number: 5 (lower is better)
Translates to: MDNISASTMSYSNFLIFFPLPLM*GTLIRK
Trigger: TTTTCTGATTAAAGTGCCCAACATGAGTGGAAGAGG...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405358.8
CDS-3UTR CAA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTTTCTATCAACTGTACTaGACGCTTTCACTTCCTCTC +
Preference number: 5 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISFYQLY*TLSLPL
Trigger: GAGAGGAAGTGAAAGCGTCAAGTACAGTTGATAGAA...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000242066.9
CDS-3UTR CAA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTGTTTCGGTGTATGAGTaGAGTTTGGAGATGCATGAT +
Preference number: 5 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISVSVYE*SLEMHD
Trigger: ATCATGCATCTCCAAACTCAACTCATACACCGAAAC...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTGTTTCGGTGTATGAGTaGAGTTTGGAGATGCATGAT +
Preference number: 5 (lower is better)
Translates to: VMVIIQLQRELPILWLSSVSVYE*SLEMHD
Trigger: ATCATGCATCTCCAAACTCAACTCATACACCGAAAC...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp TTGAGTCATCTATTTTGTCCTGAAATGCTATCTGTAGTTAACTGCACTGCTTATGTTTCGGTGTATGAGTaGAGTTTGGAGATGCATGAT +
Preference number: 5 (lower is better)
Translates to: LSHLFCPEMLSVVNCTAYVSVYE*SLEMHD
Trigger: ATCATGCATCTCCAAACTCAACTCATACACCGAAAC...ATAAGCAGTGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGATTCCTGGCTCTTGTTaGATGTCTCCATCGAATTTT +
Preference number: 5 (lower is better)
Translates to: IYRSVQKEMMDNISASTMIPGSC*MSPSNF
Trigger: AAAATTCGATGGAGACATCAAACAAGAGCCAGGAAT...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTATACATTCCTGGCTCTaGTTTGATGTCTCCATCGAA +
Preference number: 5 (lower is better)
Translates to: VMVIIQLQRELPILWLSSIHSWL*FDVSIE
Trigger: TTCGATGGAGACATCAAACAAGAGCCAGGAATGTAT...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTCTCTCCAGCCACCTTTaGCATAATTCCTTTCTCATA +
Preference number: 5 (lower is better)
Translates to: VMVIIQLQRELPILWLSSLSSHL*HNSFLI
Trigger: TATGAGAAAGGAATTATGCAAAAGGTGGCTGGAGAG...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp TTGAGTCATCTATTTTGTCCTGAAATGCTATCTGTAGTTAACTGCACTGCTTATCTCTCCAGCCACCTTTaGCATAATTCCTTTCTCATA +
Preference number: 5 (lower is better)
Translates to: LSHLFCPEMLSVVNCTAYLSSHL*HNSFLI
Trigger: TATGAGAAAGGAATTATGCAAAAGGTGGCTGGAGAG...ATAAGCAGTGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp TATAAGAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAATTCATGTCCCTTGCTaGAATCTTTTAGCGAGCTAT +
Preference number: 5 (lower is better)
Translates to: YKRQEGNLTIVEEYVTMEIHVPC*NLLASY
Trigger: ATAGCTCGCTAAAAGATTCAAGCAAGGGACATGAAT...TTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTCTTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp TATAAGAGGCAGGAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAACAAAATTCATGTCCCTaGCTTGAATCTTTTAGCGAG +
Preference number: 5 (lower is better)
Translates to: YKRQEGNLTIVEEYVTMEQNSCP*LESFSE
Trigger: CTCGCTAAAAGATTCAAGCAAGGGACATGAATTTTG...TTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTCCTGCCTCTTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp ATGGATAATATCAGTGCCAGCACTATGTCATACAGCAACTTCCTCATATTCTTTCAAAATTCATGTCCCTaGCTTGAATCTTTTAGCGAG +
Preference number: 5 (lower is better)
Translates to: MDNISASTMSYSNFLIFFQNSCP*LESFSE
Trigger: CTCGCTAAAAGATTCAAGCAAGGGACATGAATTTTG...AAAGAATATGAGGAAGTTGCTGTATGACATAGTGCTGGCACTGATATTATCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp GAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAGATTGAACAAAATTCATGTCCCTaGCTTGAATCTTTTAGCGAG +
Preference number: 5 (lower is better)
Translates to: EGNLTIVEEYVTMEAEIEQNSCP*LESFSE
Trigger: CTCGCTAAAAGATTCAAGCAAGGGACATGAATTTTG...TTCAATCTCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp TTGAGTCATCTATTTTGTCCTGAAATGCTATCTGTAGTTAACTGCACTGCTTATTGGTGTTTGGGTTTCTaGATAACTGCTCCACTTAGA +
Preference number: 5 (lower is better)
Translates to: LSHLFCPEMLSVVNCTAYWCLGF*ITAPLR
Trigger: TCTAAGTGGAGCAGTTATCAAGAAACCCAAACACCA...ATAAGCAGTGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGTCTGCACTGTCAGTCTaGTGGATTTTTATTCTGAAG +
Preference number: 5 (lower is better)
Translates to: IYRSVQKEMMDNISASTMSALSV*WIFILK
Trigger: CTTCAGAATAAAAATCCACAAGACTGACAGTGCAGA...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTAGATCCGCCCATGATTaGAGAAAAATGTTCTGCACT +
Preference number: 5 (lower is better)
Translates to: VMVIIQLQRELPILWLSSRSAHD*RKMFCT
Trigger: AGTGCAGAACATTTTTCTCAAATCATGGGCGGATCT...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp GAAGGAAATTTGACTATAGTAGAAGAGTATGTGACCATGGAAGCAGAGATTGAAAATCAATTAGAGTCTTaGCTACACAGTCTTCCTCCT +
Preference number: 5 (lower is better)
Translates to: EGNLTIVEEYVTMEAEIENQLES*LHSLPP
Trigger: AGGAGGAAGACTGTGTAGCAAAGACTCTAATTGATT...TTCAATCTCTGCTTCCATGGTCACATACTCTTCTACTATAGTCAAATTTCCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS TCA 90 bp AAACCTGATCAATTGCAATTAAAATCTGAACAGAGGCTTAGAACTTaGAGTCTTGGTGCATTAGTTCTTGCCAAAAGCAGATGTGATTGT +
Preference number: 5 (lower is better)
Translates to: KPDQLQLKSEQRLRT*SLGALVLAKSRCDC
Trigger: ACAATCACATCTGCTTTTGGCAAGAACTAATGCACCAAGACTTCAAGTTCTAAGCCTCTGTTCAGATTTTAATTGCAATTGATCAGGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399357.7
ENST00000403527.5
ENST00000420159.6
ENST00000438956.5
ENST00000443608.5
CDS-3UTR CAA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTATTCCTGGCTCTTGTTaGATGTCTCCATCGAATTTT +
Preference number: 5 (lower is better)
Translates to: VMVIIQLQRELPILWLSSIPGSC*MSPSNF
Trigger: AAAATTCGATGGAGACATCAAACAAGAGCCAGGAAT...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTATTCCTGGCTCTTGTTaGATGTCTCCATCGAATTTT +
Preference number: 5 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISIPGSC*MSPSNF
Trigger: AAAATTCGATGGAGACATCAAACAAGAGCCAGGAAT...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGAAAAGACGGTATGATTaGTATCTAAACAGCAAGGTG +
Preference number: 5 (lower is better)
Translates to: IYRSVQKEMMDNISASTMKRRYD*YLNSKV
Trigger: CACCTTGCTGTTTAGATACAAATCATACCGTCTTTT...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp TTGAGTCATCTATTTTGTCCTGAAATGCTATCTGTAGTTAACTGCACTGCTTATATTCATGTCCCTTGCTaGAATCTTTTAGCGAGCTAT +
Preference number: 5 (lower is better)
Translates to: LSHLFCPEMLSVVNCTAYIHVPC*NLLASY
Trigger: ATAGCTCGCTAAAAGATTCAAGCAAGGGACATGAAT...ATAAGCAGTGCAGTTAACTACAGATAGCATTTCAGGACAAAATAGATGACTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp GTCATGGTGATTATTCAACTTCAGAGAGAATTACCCATTTTATGGTTATCCTCTCAAAATTCATGTCCCTaGCTTGAATCTTTTAGCGAG +
Preference number: 5 (lower is better)
Translates to: VMVIIQLQRELPILWLSSQNSCP*LESFSE
Trigger: CTCGCTAAAAGATTCAAGCAAGGGACATGAATTTTG...AGAGGATAACCATAAAATGGGTAATTCTCTCTGAAGTTGAATAATCACCATGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp ATTTACAGAAGTGTCCAAAAAGAGATGATGGATAATATCAGTGCCAGCACTATGATACCATTTCTGCCATaGTTCTCTTGTGATAACGTT +
Preference number: 5 (lower is better)
Translates to: IYRSVQKEMMDNISASTMIPFLP*FSCDNV
Trigger: AACGTTATCACAAGAGAACAATGGCAGAAATGGTAT...CATAGTGCTGGCACTGATATTATCCATCATCTCTTTTTGGACACTTCTGTAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTAATCAATTAGAGTCTTaGCTACACAGTCTTCCTCCT +
Preference number: 5 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISNQLES*LHSLPP
Trigger: AGGAGGAAGACTGTGTAGCAAAGACTCTAATTGATT...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTAAAAGACGGTATGATTaGTATCTAAACAGCAAGGTG +
Preference number: 5 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISKRRYD*YLNSKV
Trigger: CACCTTGCTGTTTAGATACAAATCATACCGTCTTTT...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS-3UTR CAA 90 bp GCAAATGCAATCGCTAAATACCTTTTTACAAGTGGTGCAAAAACAGTCATTTCTATACCATTTCTGCCATaGTTCTCTTGTGATAACGTT +
Preference number: 5 (lower is better)
Translates to: ANAIAKYLFTSGAKTVISIPFLP*FSCDNV
Trigger: AACGTTATCACAAGAGAACAATGGCAGAAATGGTAT...AGAAATGACTGTTTTTGCACCACTTGTAAAAAGGTATTTAGCGATTGCATTTGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000405192.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
CDS GCA 72 bp TCCCGCGGGTCTCCCTCGCCCCTCTGCCCTAGGGGGTaGTCGGCCGGTAGGCGCTGGGTCCTCAGCGTGTGC +
Preference number: 6 (lower is better)
Translates to: SRGSPSPLCPRG*SAGRRWVLSVC
Trigger: GCACACGCTGAGGACCCAGCGCCTACCGGCCGAGCACCCCCTAGGGCAGAGGGGCGAGGGAGACCCGCGGGA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485475.1
CDS GCA 72 bp TCCCGCGGGTCTCCCTCGCCCCTCTGCCCTAGGGGGTaGTCGGCCGGTAGGCGCTGGGTCCTCAGCCTGGAA +
Preference number: 6 (lower is better)
Translates to: SRGSPSPLCPRG*SAGRRWVLSLE
Trigger: TTCCAGGCTGAGGACCCAGCGCCTACCGGCCGAGCACCCCCTAGGGCAGAGGGGCGAGGGAGACCCGCGGGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405218.6
CDS GCA 72 bp AAGATCAGATTTCGGGCTGTCAATCAGGCGGCTTGCTaGCCCTTCCCGCGGGTCTCCCTCGCCCCTCTGCCC +
Preference number: 6 (lower is better)
Translates to: KIRFRAVNQAAC*PFPRVSLAPLP
Trigger: GGGCAGAGGGGCGAGGGAGACCCGCGGGAAGGGGCAGCAAGCCGCCTGATTGACAGCCCGAAATCTGATCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405218.6
ENST00000485475.1
CDS CAA 90 bp GCGTCTCTTTCACAAGATCAGATTTCGGGCTGTCAATCAGGCGGCTaGCTGCCCCTTCCCGCGGGTCTCCCTCGCCCCTCTGCCCTAGGG +
Preference number: 6 (lower is better)
Translates to: ASLSQDQISGCQSGG*LPLPAGLPRPSALG
Trigger: CCCTAGGGCAGAGGGGCGAGGGAGACCCGCGGGAAGGGGCAGCAAGCCGCCTGATTGACAGCCCGAAATCTGATCTTGTGAAAGAGACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405218.6
ENST00000485475.1
CDS TCA 72 bp TCTGGACTTCTATCAACCTTCTCTGCAGCCCGAGCCTaGCGGGTATCCAGGGTAACCGCGAGGGGGCGGAGC +
Preference number: 6 (lower is better)
Translates to: SGLLSTFSAARA*RVSRVTARGRS
Trigger: GCTCCGCCCCCTCGCGGTTACCCTGGATACCCGTCAGGCTCGGGCTGCAGAGAAGGTTGATAGAAGTCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421381.5
CDS CAA 72 bp TCACAAGATCAGATTTCGGGCTGTCAATCAGGCGGCTaGCTGCCCCTTCCCGCGGGTCTCCCTCGCCCCTCT +
Preference number: 6 (lower is better)
Translates to: SQDQISGCQSGG*LPLPAGLPRPS
Trigger: AGAGGGGCGAGGGAGACCCGCGGGAAGGGGCAGCAAGCCGCCTGATTGACAGCCCGAAATCTGATCTTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405218.6
ENST00000485475.1
CDS CAA 72 bp CTTCCTCTCCAGCTTTTAAACAGCCAGAGCCCAGGGTaGGGGGCGAGCGGTGAGATGGCTCGGGTTTCAAGG +
Preference number: 6 (lower is better)
Translates to: LPLQLLNSQSPG*GASGEMARVSR
Trigger: CCTTGAAACCCGAGCCATCTCACCGCTCGCCCCCAACCCTGGGCTCTGGCTGTTTAAAAGCTGGAGAGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242066.9
ENST00000431887.5
ENST00000443137.5
CDS CAA 90 bp GAGGGAGGTGAGCTGGGAAGGCCCGGTCAGGTTTCGGTGTATGAGTaGAGTTTGGAGATGCATGATGCAGTGGGGACACTGGCGTGCTGG +
Preference number: 6 (lower is better)
Translates to: EGGELGRPGQVSVYE*SLEMHDAVGTLACW
Trigger: CCAGCACGCCAGTGTCCCCACTGCATCATGCATCTCCAAACTCAACTCATACACCGAAACCTGACCGGGCCTTCCCAGCTCACCTCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000403685.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
ENST00000438956.5
ENST00000443137.5
ENST00000472931.6
ENST00000476355.5
ENST00000476720.6
ENST00000497115.5
CDS CAA 90 bp GGTGAGCTGGGAAGGCCCGGTCAGGTTTCGGTGTATGAGTTGAGTTaGGAGATGCATGATGCAGTGGGGACACTGGCGTGCTGGATGGTG +
Preference number: 6 (lower is better)
Translates to: GELGRPGQVSVYELS*EMHDAVGTLACWMV
Trigger: CACCATCCAGCACGCCAGTGTCCCCACTGCATCATGCATCTCCAAACTCAACTCATACACCGAAACCTGACCGGGCCTTCCCAGCTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000403685.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
ENST00000438956.5
ENST00000443137.5
ENST00000472931.6
ENST00000476355.5
ENST00000476720.6
ENST00000497115.5
CDS TCA 72 bp TCCTCTACTTCTCCTCCAGGGGCCTCCAATCCAAACTaGTGGATCGCTGCCTCCCATTGGCTCCGCGTCTCT +
Preference number: 6 (lower is better)
Translates to: SSTSPPGASNPN*WIAASHWLRVS
Trigger: AGAGACGCGGAGCCAATGGGAGGCAGCGATCCATCAGTTTGGATTGGAGGCCCCTGGAGGAGAAGTAGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405218.6
ENST00000485475.1
CDS TCA 72 bp GATTCCAGGAAGCGCCTGGGCCCCGAGGCTGAACAGTaGAGCTCATGGGTACTATCTGAGGGTGCAACCAAG +
Preference number: 6 (lower is better)
Translates to: DSRKRLGPEAEQ*SSWVLSEGATK
Trigger: CTTGGTTGCACCCTCAGATAGTACCCATGAGCTTCACTGTTCAGCCTCGGGGCCCAGGCGCTTCCTGGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403685.5
CDS CCA 72 bp GAAATCTGTGGTCCATGGGGTAGCTGCTATCTGGTATaGACTGCGATGGAGGGAGGTGAGCTGGGAAGGCCC +
Preference number: 6 (lower is better)
Translates to: EICGPWGSCYLV*TAMEGGELGRP
Trigger: GGGCCTTCCCAGCTCACCTCCCTCCATCGCAGTCCATACCAGATAGCAGCTACCCCATGGACCACAGATTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000403685.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
ENST00000438956.5
ENST00000443137.5
ENST00000472931.6
ENST00000476720.6
ENST00000497115.5
CDS CCA 72 bp GCGGCGAAATCTGTGGTCCATGGGGTAGCTGCTATCTaGTATGGACTGCGATGGAGGGAGGTGAGCTGGGAA +
Preference number: 6 (lower is better)
Translates to: AAKSVVHGVAAI*YGLRWREVSWE
Trigger: TTCCCAGCTCACCTCCCTCCATCGCAGTCCATACCAGATAGCAGCTACCCCATGGACCACAGATTTCGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000403685.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
ENST00000438956.5
ENST00000443137.5
ENST00000472931.6
ENST00000476720.6
ENST00000497115.5
CDS CCA 72 bp GGTGGGAAGGGGATGTTTGGCTCAGACATCTGGCGTTaGTACATAGGACGTCCTTCCCTTGGCATCGTCGGC +
Preference number: 6 (lower is better)
Translates to: GGKGMFGSDIWR*YIGRPSLGIVG
Trigger: GCCGACGATGCCAAGGGAAGGACGTCCTATGTACCAACGCCAGATGTCTGAGCCAAACATCCCCTTCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000403685.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
ENST00000438956.5
ENST00000443137.5
ENST00000443608.5
ENST00000472931.6
ENST00000476720.6
CDS TCA 72 bp TGTTTCCCTGCGCGGTCGGTGTACCCCGGGCAGCTCTaGTTCGCAAACGTGTGCAAAACTAGCAATGGCGAT +
Preference number: 6 (lower is better)
Translates to: CFPARSVYPGQL*FANVCKTSNGD
Trigger: ATCGCCATTGCTAGTTTTGCACACGTTTGCGAATCAGAGCTGCCCGGGGTACACCGACCGCGCAGGGAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430479.6
ENST00000433547.1
ENST00000443137.5
ENST00000485475.1
CDS GCA 72 bp AAAGCTGGCGGCGAAATCTGTGGTCCATGGGGTAGCTaGTATCTGGTATGGACTGCGATGGAGGGAGGTGAG +
Preference number: 6 (lower is better)
Translates to: KAGGEICGPWGS*YLVWTAMEGGE
Trigger: CTCACCTCCCTCCATCGCAGTCCATACCAGATAGCAGCTACCCCATGGACCACAGATTTCGCCGCCAGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000403685.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
ENST00000438956.5
ENST00000443137.5
ENST00000472931.6
ENST00000476720.6
ENST00000497115.5
CDS GCA 72 bp TCCTCCAGGGGCCTCCAATCCAAACTGATGGATCGCTaGCTCCCATTGGCTCCGCGTCTCTTTCACAAGATC +
Preference number: 6 (lower is better)
Translates to: SSRGLQSKLMDR*LPLAPRLFHKI
Trigger: GATCTTGTGAAAGAGACGCGGAGCCAATGGGAGGCAGCGATCCATCAGTTTGGATTGGAGGCCCCTGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405218.6
ENST00000485475.1
CDS CCA 72 bp GAGGGGGAAAGCTTTGGCTGGCCGCACTGCCAACCATaGTGTTGTGTTCATACACTGGGTCGTGGTACTCCT +
Preference number: 6 (lower is better)
Translates to: EGESFGWPHCQP*CCVHTLGRGTP
Trigger: AGGAGTACCACGACCCAGTGTATGAACACAACACCATGGTTGGCAGTGCGGCCAGCCAAAGCTTTCCCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000403685.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
ENST00000438956.5
ENST00000443137.5
ENST00000443608.5
ENST00000472931.6
ENST00000476720.6
CDS CAA 72 bp GGAAGGCCCGGTCAGGTTTCGGTGTATGAGTTGAGTTaGGAGATGCATGATGCAGTGGGGACACTGGCGTGC +
Preference number: 6 (lower is better)
Translates to: GRPGQVSVYELS*EMHDAVGTLAC
Trigger: GCACGCCAGTGTCCCCACTGCATCATGCATCTCCAAACTCAACTCATACACCGAAACCTGACCGGGCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000403685.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
ENST00000438956.5
ENST00000443137.5
ENST00000472931.6
ENST00000476355.5
ENST00000476720.6
ENST00000497115.5
CDS CAA 72 bp TGGTGGGAAGGGGATGTTTGGCTCAGACATCTGGCGTaGGTACATAGGACGTCCTTCCCTTGGCATCGTCGG +
Preference number: 6 (lower is better)
Translates to: WWEGDVWLRHLA*VHRTSFPWHRR
Trigger: CCGACGATGCCAAGGGAAGGACGTCCTATGTACCAACGCCAGATGTCTGAGCCAAACATCCCCTTCCCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000403685.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
ENST00000438956.5
ENST00000443137.5
ENST00000443608.5
ENST00000472931.6
ENST00000476720.6
CDS CAA 90 bp AAAGCCTTGTGGTGGGAAGGGGATGTTTGGCTCAGACATCTGGCGTaGGTACATAGGACGTCCTTCCCTTGGCATCGTCGGCAAAGGAGG +
Preference number: 6 (lower is better)
Translates to: KALWWEGDVWLRHLA*VHRTSFPWHRRQRR
Trigger: CCTCCTTTGCCGACGATGCCAAGGGAAGGACGTCCTATGTACCAACGCCAGATGTCTGAGCCAAACATCCCCTTCCCACCACAAGGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000403685.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
ENST00000438956.5
ENST00000443137.5
ENST00000443608.5
ENST00000472931.6
ENST00000476720.6
CDS TCA 72 bp AGCTGGGAAGGCCCGGTCAGGTTTCGGTGTATGAGTTaGGTTTGGAGATGCATGATGCAGTGGGGACACTGG +
Preference number: 6 (lower is better)
Translates to: SWEGPVRFRCMS*VWRCMMQWGHW
Trigger: CCAGTGTCCCCACTGCATCATGCATCTCCAAACTCAACTCATACACCGAAACCTGACCGGGCCTTCCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000403685.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
ENST00000438956.5
ENST00000443137.5
ENST00000472931.6
ENST00000476355.5
ENST00000476720.6
ENST00000497115.5
CDS TCA 72 bp GCCCAGCACTTCCCCCTTGGAAGCCGAAAGCGCCTCTaGCAGAGCTCAATTCGGTGGTTTTTCCTCTACTTC +
Preference number: 6 (lower is better)
Translates to: AQHFPLGSRKRL*QSSIRWFFLYF
Trigger: GAAGTAGAGGAAAAACCACCGAATTGAGCTCTGTCAGAGGCGCTTTCGGCTTCCAAGGGGGAAGTGCTGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000405218.6
ENST00000485475.1
CDS GCA 72 bp GAGGCGATGTATTTATTTACACTCTCGATGTTTCCCTaGGCGGTCGGTGTACCCCGGGCAGCTCTGATTCGC +
Preference number: 6 (lower is better)
Translates to: EAMYLFTLSMFP*AVGVPRAALIR
Trigger: GCGAATCAGAGCTGCCCGGGGTACACCGACCGCGCAGGGAAACATCGAGAGTGTAAATAAATACATCGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430479.6
ENST00000433547.1
ENST00000443137.5
ENST00000485475.1
CDS CCA 72 bp CCTTGTGGTGGGAAGGGGATGTTTGGCTCAGACATCTaGCGTTGGTACATAGGACGTCCTTCCCTTGGCATC +
Preference number: 6 (lower is better)
Translates to: PCGGKGMFGSDI*RWYIGRPSLGI
Trigger: GATGCCAAGGGAAGGACGTCCTATGTACCAACGCCAGATGTCTGAGCCAAACATCCCCTTCCCACCACAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000403685.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
ENST00000438956.5
ENST00000443137.5
ENST00000443608.5
ENST00000472931.6
ENST00000476720.6
CDS CCA 72 bp CACTGGGTCGTGGTACTCCTGCTTAAAGCCTTGTGGTaGGAAGGGGATGTTTGGCTCAGACATCTGGCGTTG +
Preference number: 6 (lower is better)
Translates to: HWVVVLLLKALW*EGDVWLRHLAL
Trigger: CAACGCCAGATGTCTGAGCCAAACATCCCCTTCCCACCACAAGGCTTTAAGCAGGAGTACCACGACCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000403685.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
ENST00000438956.5
ENST00000443137.5
ENST00000443608.5
ENST00000472931.6
ENST00000476720.6
CDS CCA 72 bp GGCCGCACTGCCAACCATGGTGTTGTGTTCATACACTaGGTCGTGGTACTCCTGCTTAAAGCCTTGTGGTGG +
Preference number: 6 (lower is better)
Translates to: GRTANHGVVFIH*VVVLLLKALWW
Trigger: CCACCACAAGGCTTTAAGCAGGAGTACCACGACCCAGTGTATGAACACAACACCATGGTTGGCAGTGCGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000403685.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
ENST00000438956.5
ENST00000443137.5
ENST00000443608.5
ENST00000472931.6
ENST00000476720.6
CDS CAA 72 bp GAGCTGGGAAGGCCCGGTCAGGTTTCGGTGTATGAGTaGAGTTTGGAGATGCATGATGCAGTGGGGACACTG +
Preference number: 6 (lower is better)
Translates to: ELGRPGQVSVYE*SLEMHDAVGTL
Trigger: CAGTGTCCCCACTGCATCATGCATCTCCAAACTCAACTCATACACCGAAACCTGACCGGGCCTTCCCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000242066.9
ENST00000403527.5
ENST00000403685.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
ENST00000438956.5
ENST00000443137.5
ENST00000472931.6
ENST00000476355.5
ENST00000476720.6
ENST00000497115.5
CDS CAA 90 bp ACGCTTTCACTTCCTCTCCAGCTTTTAAACAGCCAGAGCCCAGGGTaGGGGGCGAGCGGTGAGATGGCTCGGGTTTCAAGGACAATAACT +
Preference number: 6 (lower is better)
Translates to: TLSLPLQLLNSQSPG*GASGEMARVSRTIT
Trigger: AGTTATTGTCCTTGAAACCCGAGCCATCTCACCGCTCGCCCCCAACCCTGGGCTCTGGCTGTTTAAAAGCTGGAGAGGAAGTGAAAGCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242066.9
ENST00000431887.5
ENST00000443137.5
CDS CAA 90 bp AGAGGAGGGGGAAAGCTTTGGCTGGCCGCACTGCCAACCATGGTGTaGTGTTCATACACTGGGTCGTGGTACTCCTGCTTAAAGCCTTGT +
Preference number: 6 (lower is better)
Translates to: RGGGKLWLAALPTMV*CSYTGSWYSCLKPC
Trigger: ACAAGGCTTTAAGCAGGAGTACCACGACCCAGTGTATGAACACAACACCATGGTTGGCAGTGCGGCCAGCCAAAGCTTTCCCCCTCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000403685.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
ENST00000438956.5
ENST00000443137.5
ENST00000443608.5
ENST00000472931.6
ENST00000476720.6
CDS CAA 90 bp TCCTCCAGGGGCCTCCAATCCAAACTGATGGATCGCTGCCTCCCATaGGCTCCGCGTCTCTTTCACAAGATCAGATTTCGGGCTGTCAAT +
Preference number: 6 (lower is better)
Translates to: SSRGLQSKLMDRCLP*APRLFHKIRFRAVN
Trigger: ATTGACAGCCCGAAATCTGATCTTGTGAAAGAGACGCGGAGCCAATGGGAGGCAGCGATCCATCAGTTTGGATTGGAGGCCCCTGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405218.6
ENST00000485475.1
CDS CCA 72 bp ATACACTGGGTCGTGGTACTCCTGCTTAAAGCCTTGTaGTGGGAAGGGGATGTTTGGCTCAGACATCTGGCG +
Preference number: 6 (lower is better)
Translates to: IHWVVVLLLKAL*WEGDVWLRHLA
Trigger: CGCCAGATGTCTGAGCCAAACATCCCCTTCCCACCACAAGGCTTTAAGCAGGAGTACCACGACCCAGTGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000403685.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
ENST00000438956.5
ENST00000443137.5
ENST00000443608.5
ENST00000472931.6
ENST00000476720.6
CDS CCA 72 bp CTGCCAACCATGGTGTTGTGTTCATACACTGGGTCGTaGTACTCCTGCTTAAAGCCTTGTGGTGGGAAGGGG +
Preference number: 6 (lower is better)
Translates to: LPTMVLCSYTGS*YSCLKPCGGKG
Trigger: CCCCTTCCCACCACAAGGCTTTAAGCAGGAGTACCACGACCCAGTGTATGAACACAACACCATGGTTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000403685.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
ENST00000438956.5
ENST00000443137.5
ENST00000443608.5
ENST00000472931.6
ENST00000476720.6
CDS CAA 72 bp GGAAAGCTTTGGCTGGCCGCACTGCCAACCATGGTGTaGTGTTCATACACTGGGTCGTGGTACTCCTGCTTA +
Preference number: 6 (lower is better)
Translates to: GKLWLAALPTMV*CSYTGSWYSCL
Trigger: TAAGCAGGAGTACCACGACCCAGTGTATGAACACAACACCATGGTTGGCAGTGCGGCCAGCCAAAGCTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000403685.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
ENST00000438956.5
ENST00000443137.5
ENST00000443608.5
ENST00000472931.6
ENST00000476720.6
CDS CAA 72 bp GGGTTCCTGTTTAATCATCAGAGGAGGGGGAAAGCTTaGGCTGGCCGCACTGCCAACCATGGTGTTGTGTTC +
Preference number: 6 (lower is better)
Translates to: GFLFNHQRRGKA*AGRTANHGVVF
Trigger: GAACACAACACCATGGTTGGCAGTGCGGCCAGCCAAAGCTTTCCCCCTCCTCTGATGATTAAACAGGAACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000403685.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
ENST00000438956.5
ENST00000443137.5
ENST00000443608.5
ENST00000472931.6
ENST00000476720.6
CDS CAA 72 bp GGCCTCCAATCCAAACTGATGGATCGCTGCCTCCCATaGGCTCCGCGTCTCTTTCACAAGATCAGATTTCGG +
Preference number: 6 (lower is better)
Translates to: GLQSKLMDRCLP*APRLFHKIRFR
Trigger: CCGAAATCTGATCTTGTGAAAGAGACGCGGAGCCAATGGGAGGCAGCGATCCATCAGTTTGGATTGGAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405218.6
ENST00000485475.1
CDS CAA 90 bp GGTGTTGTGTTCATACACTGGGTCGTGGTACTCCTGCTTAAAGCCTaGTGGTGGGAAGGGGATGTTTGGCTCAGACATCTGGCGTTGGTA +
Preference number: 6 (lower is better)
Translates to: GVVFIHWVVVLLLKA*WWEGDVWLRHLALV
Trigger: TACCAACGCCAGATGTCTGAGCCAAACATCCCCTTCCCACCACAAGGCTTTAAGCAGGAGTACCACGACCCAGTGTATGAACACAACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000403685.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
ENST00000438956.5
ENST00000443137.5
ENST00000443608.5
ENST00000472931.6
ENST00000476720.6
CDS CAA 90 bp TTGTGCAATGCACAGCCAAGGGCTAAGGGAGCAAGTCCAGAGGTGTaGCCTTTTTCTAATCTGCACAGGGACACTAGCAGGGATCAGGTG +
Preference number: 6 (lower is better)
Translates to: LCNAQPRAKGASPEV*PFSNLHRDTSRDQV
Trigger: CACCTGATCCCTGCTAGTGTCCCTGTGCAGATTAGAAAAAGGCAACACCTCTGGACTTGCTCCCTTAGCCCTTGGCTGTGCATTGCACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483075.1
CDS TCA 72 bp ATCCAGAAGAGCTACCAAAAACTGCCAGAGCTGAAGTaGTCCTCGCCGTTGGTATGTGGGTCCTTCCCGATA +
Preference number: 6 (lower is better)
Translates to: IQKSYQKLPELK*SSPLVCGSFPI
Trigger: TATCGGGAAGGACCCACATACCAACGGCGAGGATCACTTCAGCTCTGGCAGTTTTTGGTAGCTCTTCTGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000403685.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
ENST00000438956.5
ENST00000443137.5
ENST00000472931.6
CDS GCA 72 bp ATGGTGTTGTGTTCATACACTGGGTCGTGGTACTCCTaGTTAAAGCCTTGTGGTGGGAAGGGGATGTTTGGC +
Preference number: 6 (lower is better)
Translates to: MVLCSYTGSWYS*LKPCGGKGMFG
Trigger: GCCAAACATCCCCTTCCCACCACAAGGCTTTAAGCAGGAGTACCACGACCCAGTGTATGAACACAACACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000403685.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
ENST00000438956.5
ENST00000443137.5
ENST00000443608.5
ENST00000472931.6
ENST00000476720.6
CDS CCA 72 bp GCTTCGGAGGGAAGAACCAGGCTGGAGACAACAATGTaGAAGACATCGCTGTTCAAAGCTGTGCTGACCAAT +
Preference number: 6 (lower is better)
Translates to: ASEGRTRLETTM*KTSLFKAVLTN
Trigger: ATTGGTCAGCACAGCTTTGAACAGCGATGTCTTCCACATTGTTGTCTCCAGCCTGGTTCTTCCCTCCGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483075.1
CDS CAA 72 bp TTCATACACTGGGTCGTGGTACTCCTGCTTAAAGCCTaGTGGTGGGAAGGGGATGTTTGGCTCAGACATCTG +
Preference number: 6 (lower is better)
Translates to: FIHWVVVLLLKA*WWEGDVWLRHL
Trigger: CAGATGTCTGAGCCAAACATCCCCTTCCCACCACAAGGCTTTAAGCAGGAGTACCACGACCCAGTGTATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000403685.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
ENST00000438956.5
ENST00000443137.5
ENST00000443608.5
ENST00000472931.6
ENST00000476720.6
CDS CAA 90 bp AAAATCTCTGGGTTCCTGTTTAATCATCAGAGGAGGGGGAAAGCTTaGGCTGGCCGCACTGCCAACCATGGTGTTGTGTTCATACACTGG +
Preference number: 6 (lower is better)
Translates to: KISGFLFNHQRRGKA*AGRTANHGVVFIHW
Trigger: CCAGTGTATGAACACAACACCATGGTTGGCAGTGCGGCCAGCCAAAGCTTTCCCCCTCCTCTGATGATTAAACAGGAACCCAGAGATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000403685.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
ENST00000438956.5
ENST00000443137.5
ENST00000443608.5
ENST00000472931.6
ENST00000476720.6
CDS GCA 72 bp AAGTCCTCCACCAGAACACCAAATAATGATATGCGCTaGTCTAAAGGAAACAGCAAGCCAGCCGGGTTCTGG +
Preference number: 6 (lower is better)
Translates to: KSSTRTPNNDMR*SKGNSKPAGFW
Trigger: CCAGAACCCGGCTGGCTTGCTGTTTCCTTTAGAGCAGCGCATATCATTATTTGGTGTTCTGGTGGAGGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399357.7
ENST00000403527.5
ENST00000420159.6
ENST00000438956.5
ENST00000443608.5
CDS CCA 72 bp ATGTCCAATGGACAGCTTCGGAGGGAAGAACCAGGCTaGAGACAACAATGTGGAAGACATCGCTGTTCAAAG +
Preference number: 6 (lower is better)
Translates to: MSNGQLRREEPG*RQQCGRHRCSK
Trigger: CTTTGAACAGCGATGTCTTCCACATTGTTGTCTCCAGCCTGGTTCTTCCCTCCGAAGCTGTCCATTGGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483075.1
CDS CCA 72 bp TCGCCGTTGGTATGTGGGTCCTTCCCGATACATTCCTaGCTCTTGTTTGATGTCTCCATCGAATTTTTCTGG +
Preference number: 6 (lower is better)
Translates to: SPLVCGSFPIHS*LLFDVSIEFFW
Trigger: CCAGAAAAATTCGATGGAGACATCAAACAAGAGCCAGGAATGTATCGGGAAGGACCCACATACCAACGGCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000403685.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
ENST00000438956.5
ENST00000472931.6
CDS CCA 72 bp TTTCTGGGACAACACAGGTGTCATCATAAAACTGCCTaGGGCCCTTTTCAAACATACAGCCTTCTGTTCTGC +
Preference number: 6 (lower is better)
Translates to: FLGQHRCHHKTA*GPFQTYSLLFC
Trigger: GCAGAACAGAAGGCTGTATGTTTGAAAAGGGCCCCAGGCAGTTTTATGATGACACCTGTGTTGTCCCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000403685.5
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
ENST00000438956.5
ENST00000443137.5
ENST00000472931.6
CDS CCA 72 bp CAGCAAGCCAGCCGGGTTCTGGCTCTAGGAGGTCTCTaGAGGTACAATAATATAAACCTGATCAATTGCAAT +
Preference number: 6 (lower is better)
Translates to: QQASRVLALGGL*RYNNINLINCN
Trigger: ATTGCAATTGATCAGGTTTATATTATTGTACCTCCAGAGACCTCCTAGAGCCAGAACCCGGCTGGCTTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399357.7
ENST00000403527.5
ENST00000420159.6
ENST00000438956.5
ENST00000443608.5
CDS CCA 72 bp TATTTTGAGCATTTAGCTGGAGATTTCCTCAGGATCTaGACTTCTATCAACCTGAAGGCCACGCTAGGCGAA +
Preference number: 6 (lower is better)
Translates to: YFEHLAGDFLRI*TSINLKATLGE
Trigger: TTCGCCTAGCGTGGCCTTCAGGTTGATAGAAGTCCAGATCCTGAGGAAATCTCCAGCTAAATGCTCAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000405192.6
ENST00000405218.6
ENST00000483075.1
CDS CCA 72 bp TTTCTGGGACAACACAGGTGTCATCATAAAACTGCCTaGGGCCCTTTTCAAACATACAGCCTGAGTCATATG +
Preference number: 6 (lower is better)
Translates to: FLGQHRCHHKTA*GPFQTYSLSHM
Trigger: CATATGACTCAGGCTGTATGTTTGAAAAGGGCCCCAGGCAGTTTTATGATGACACCTGTGTTGTCCCAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000405192.6
CDS CAA 72 bp TTGGTATGTGGGTCCTTCCCGATACATTCCTGGCTCTaGTTTGATGTCTCCATCGAATTTTTCTGGGACAAC +
Preference number: 6 (lower is better)
Translates to: LVCGSFPIHSWL*FDVSIEFFWDN
Trigger: GTTGTCCCAGAAAAATTCGATGGAGACATCAAACAAGAGCCAGGAATGTATCGGGAAGGACCCACATACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000242066.9
ENST00000399357.7
ENST00000403527.5
ENST00000403685.5
ENST00000405192.6
ENST00000405218.6
ENST00000405358.8
ENST00000420159.6
ENST00000430479.6
ENST00000438956.5
ENST00000472931.6
CDS GCA 72 bp AAGAGACGGAGACACCTCTTTCATCAGGATAGTTTTTaGGACCCACAACCATGCAATTATCTGGAGAGACAT +
Preference number: 6 (lower is better)
Translates to: KRRRHLFHQDSF*DPQPCNYLERH
Trigger: ATGTCTCTCCAGATAATTGCATGGTTGTGGGTCGCAAAAACTATCCTGATGAAAGAGGTGTCTCCGTCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433547.1
CDS CCA 72 bp TATTTTGAGCATTTAGCTGGAGATTTCCTCAGGATCTaGACTTCTATCAACCTGGATCCAAAGAGAGCCAAC +
Preference number: 6 (lower is better)
Translates to: YFEHLAGDFLRI*TSINLDPKRAN
Trigger: GTTGGCTCTCTTTGGATCCAGGTTGATAGAAGTCCAGATCCTGAGGAAATCTCCAGCTAAATGCTCAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430479.6
ENST00000433547.1
ENST00000443137.5
CDS GCA 72 bp TGTAAGGCACTTGCTGGTCATAAAATCCATCCATGCTaGTGCTCTTCGCAAATCTCAGCTCAGTATTTTATA +
Preference number: 6 (lower is better)
Translates to: CKALAGHKIHPC*CSSQISAQYFI
Trigger: TATAAAATACTGAGCTGAGATTTGCGAAGAGCAGCAGCATGGATGGATTTTATGACCAGCAAGTGCCTTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000242066.9
ENST00000403685.5
ENST00000405192.6
ENST00000405218.6
ENST00000421381.5
ENST00000430479.6
ENST00000431887.5
ENST00000433547.1
ENST00000443137.5
ENST00000460438.5
ENST00000483075.1
CDS GCA 72 bp AAGGCACTTGCTGGTCATAAAATCCATCCATGCTGCTaGTCTTCGCAAATCTCAGCTCAGTATTTTATATTT +
Preference number: 6 (lower is better)
Translates to: KALAGHKIHPCC*SSQISAQYFIF
Trigger: AAATATAAAATACTGAGCTGAGATTTGCGAAGAGCAGCAGCATGGATGGATTTTATGACCAGCAAGTGCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000242066.9
ENST00000403685.5
ENST00000405192.6
ENST00000405218.6
ENST00000421381.5
ENST00000430479.6
ENST00000431887.5
ENST00000433547.1
ENST00000443137.5
ENST00000460438.5
ENST00000483075.1
CDS GCA 72 bp CTCTTTCATCAGGATAGTTTTTGCGACCCACAACCATaGAATTATCTGGAGAGACATAAAAAGTTGTTGGAA +
Preference number: 6 (lower is better)
Translates to: LFHQDSFCDPQP*NYLERHKKLLE
Trigger: TTCCAACAACTTTTTATGTCTCTCCAGATAATTGCATGGTTGTGGGTCGCAAAAACTATCCTGATGAAAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433547.1
CDS TCA 72 bp CAATTGCAATTAAAATCTGAACAGAGGCTTAGAACTTaGAGTCTTGGTGCATTAGTTCTTGCCAAAAGCAGA +
Preference number: 6 (lower is better)
Translates to: QLQLKSEQRLRT*SLGALVLAKSR
Trigger: TCTGCTTTTGGCAAGAACTAATGCACCAAGACTTCAAGTTCTAAGCCTCTGTTCAGATTTTAATTGCAATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399357.7
ENST00000403527.5
ENST00000420159.6
ENST00000438956.5
ENST00000443608.5