RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ETNPPL (Homo sapiens)

Ensembl gene IDs: ENSG00000164089

Ensembl transcript IDs: ENST00000296486.8, ENST00000411864.6, ENST00000503912.1, ENST00000505233.5, ENST00000509402.1, ENST00000510706.5, ENST00000510723.1, ENST00000512320.1, ENST00000512646.5

Found 359 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCTGCACCGTGTACATATTCTGCCACTTTCTGGAAGTAGCCTGCTaGAGGAATTATTTGTCCGCCACAACTCTGCATGGATTCAGCAAT +
Preference number: 1 (lower is better)
Translates to: PCTVYIFCHFLEVAC*RNYLSATTLHGFSN
Trigger: ATTGCTGAATCCATGCAGAGTTGTGGCGGACAAATAATTCCTCCAGCAGGCTACTTCCAGAAAGTGGCAGAATATGTACACGGTGCAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505233.5
3UTR TCA 90 bp ATCTGGAAGCTCCAGAAATGTTTCCCAACTCTGCCAAAGCCCACTTaGACTTCATCAGCTATAAACACACCCCCTGCACCGTGTACATAT +
Preference number: 1 (lower is better)
Translates to: IWKLQKCFPTLPKPT*TSSAINTPPAPCTY
Trigger: ATATGTACACGGTGCAGGGGGTGTGTTTATAGCTGATGAAGTTCAAGTGGGCTTTGGCAGAGTTGGGAAACATTTCTGGAGCTTCCAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505233.5
3UTR TCA 90 bp AGCATCTTCAATGATTTTCTTCACTTCATCTGCATAAGCACTGGCTaGGTCTGCATGGTCTTCTCTATATTTTCCTCTGTAAGTATCTGG +
Preference number: 1 (lower is better)
Translates to: SIFNDFLHFICISTG*VCMVFSIFSSVSIW
Trigger: CCAGATACTTACAGAGGAAAATATAGAGAAGACCATGCAGACTCAGCCAGTGCTTATGCAGATGAAGTGAAGAAAATCATTGAAGATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505233.5
3UTR-3UTR TCA 90 bp AACTGCCGAGCCAGGCGTAAGGCTAAGTCGTTGGCTTCGGATCCTGAATTTGTACATCCTGGTGGCCTCTaGACTGCCGAGCCAGGCGTA +
Preference number: 2 (lower is better)
Translates to: NCRARRKAKSLASDPEFVHPGGL*TAEPGV
Trigger: TACGCCTGGCTCGGCAGTTCAGAGGCCACCAGGATG...TACAAATTCAGGATCCGAAGCCAACGACTTAGCCTTACGCCTGGCTCGGCAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509402.1
3UTR-3UTR CCA 90 bp AACTGCCGAGCCAGGCGTAAGGCTAAGTCGTTGGCTTCGGATCCTGAATTTGTAGTGATCACATCCTGGTaGCCTCTGAACTGCCGAGCC +
Preference number: 2 (lower is better)
Translates to: NCRARRKAKSLASDPEFVVITSW*PLNCRA
Trigger: GGCTCGGCAGTTCAGAGGCCACCAGGATGTGATCAC...TACAAATTCAGGATCCGAAGCCAACGACTTAGCCTTACGCCTGGCTCGGCAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509402.1
3UTR-3UTR CCA 90 bp AACTGCCGAGCCAGGCGTAAGGCTAAGTCGTTGGCTTCGGATCCTGAATTTGTAAGAGTGATCACATCCTaGTGGCCTCTGAACTGCCGA +
Preference number: 2 (lower is better)
Translates to: NCRARRKAKSLASDPEFVRVITS*WPLNCR
Trigger: TCGGCAGTTCAGAGGCCACCAGGATGTGATCACTCT...TACAAATTCAGGATCCGAAGCCAACGACTTAGCCTTACGCCTGGCTCGGCAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509402.1
3UTR-3UTR TCA 90 bp ATTATTTGTCCGCCACAACTCTGCATGGATTCAGCAATAAAGGCAGCAATCTTCCATCCTGGTGGCCTCTaGACTGCCGAGCCAGGCGTA +
Preference number: 2 (lower is better)
Translates to: IICPPQLCMDSAIKAAIFHPGGL*TAEPGV
Trigger: TACGCCTGGCTCGGCAGTTCAGAGGCCACCAGGATG...GAAGATTGCTGCCTTTATTGCTGAATCCATGCAGAGTTGTGGCGGACAAATAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505233.5
3UTR-3UTR TCA 90 bp ACCATACATCTGGAAGCTCCAGAAATGTTTCCCAACTCTGCCAAAGCCCACTTGAAGCATGGTCAAGAGTaGTCACATCCTGGTGGCCTC +
Preference number: 2 (lower is better)
Translates to: TIHLEAPEMFPNSAKAHLKHGQE*SHPGGL
Trigger: GAGGCCACCAGGATGTGATCACTCTTGACCATGCTT...CAAGTGGGCTTTGGCAGAGTTGGGAAACATTTCTGGAGCTTCCAGATGTATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505233.5
3UTR-3UTR CCA 90 bp TCTTCACTTCATCTGCATAAGCACTGGCTGAGTCTGCATGGTCTTCTCTATATTGTGATCACATCCTGGTaGCCTCTGAACTGCCGAGCC +
Preference number: 2 (lower is better)
Translates to: SSLHLHKHWLSLHGLLYIVITSW*PLNCRA
Trigger: GGCTCGGCAGTTCAGAGGCCACCAGGATGTGATCAC...AATATAGAGAAGACCATGCAGACTCAGCCAGTGCTTATGCAGATGAAGTGAAGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505233.5
3UTR CAA 90 bp CATCTGGAAGCTCCAGAAATGTTTCCCAACTCTGCCAAAGCCCACTaGAACTTCATCAGCTATAAACACACCCCCTGCACCGTGTACATA +
Preference number: 2 (lower is better)
Translates to: HLEAPEMFPNSAKAH*NFISYKHTPCTVYI
Trigger: TATGTACACGGTGCAGGGGGTGTGTTTATAGCTGATGAAGTTCAAGTGGGCTTTGGCAGAGTTGGGAAACATTTCTGGAGCTTCCAGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505233.5
3UTR-3UTR CCA 90 bp GCCCACTTGAACTTCATCAGCTATAAACACACCCCCTGCACCGTGTACATATTCTCCTCTGTAAGTATCTaGAGTTGGTGCCACATGTAC +
Preference number: 2 (lower is better)
Translates to: AHLNFISYKHTPCTVYIFSSVSI*SWCHMY
Trigger: GTACATGTGGCACCAACTCCAGATACTTACAGAGGA...GAATATGTACACGGTGCAGGGGGTGTGTTTATAGCTGATGAAGTTCAAGTGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505233.5
3UTR-3UTR TCA 90 bp AGGAATTATTTGTCCGCCACAACTCTGCATGGATTCAGCAATAAAGGCAGCAATTGCATAAGCACTGGCTaGGTCTGCATGGTCTTCTCT +
Preference number: 2 (lower is better)
Translates to: RNYLSATTLHGFSNKGSNCISTG*VCMVFS
Trigger: AGAGAAGACCATGCAGACTCAGCCAGTGCTTATGCA...ATTGCTGCCTTTATTGCTGAATCCATGCAGAGTTGTGGCGGACAAATAATTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505233.5
3UTR-3UTR GCA 90 bp CATACATCTGGAAGCTCCAGAAATGTTTCCCAACTCTGCCAAAGCCCACTTGAATTTCTGGAAGTAGCCTaGTGGAGGAATTATTTGTCC +
Preference number: 2 (lower is better)
Translates to: HTSGSSRNVSQLCQSPLEFLEVA*WRNYLS
Trigger: GGACAAATAATTCCTCCAGCAGGCTACTTCCAGAAA...TTCAAGTGGGCTTTGGCAGAGTTGGGAAACATTTCTGGAGCTTCCAGATGTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505233.5
3UTR-3UTR CCA 90 bp GTCTTCTCTATATTTTCCTCTGTAAGTATCTGGAGTTGGTGCCACATGTACAAAAGAGTGATCACATCCTaGTGGCCTCTGAACTGCCGA +
Preference number: 2 (lower is better)
Translates to: VFSIFSSVSIWSWCHMYKRVITS*WPLNCR
Trigger: TCGGCAGTTCAGAGGCCACCAGGATGTGATCACTCT...TTTGTACATGTGGCACCAACTCCAGATACTTACAGAGGAAAATATAGAGAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505233.5
3UTR-3UTR TCA 90 bp CATACATCTGGAAGCTCCAGAAATGTTTCCCAACTCTGCCAAAGCCCACTTGAATTCCTTCCACTGTTATaGGCATCTTCAATGATTTTC +
Preference number: 2 (lower is better)
Translates to: HTSGSSRNVSQLCQSPLEFLPLL*ASSMIF
Trigger: GAAAATCATTGAAGATGCTCATAACAGTGGAAGGAA...TTCAAGTGGGCTTTGGCAGAGTTGGGAAACATTTCTGGAGCTTCCAGATGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505233.5
3UTR-3UTR CCA 90 bp TCTTCACTTCATCTGCATAAGCACTGGCTGAGTCTGCATGGTCTTCTCTATATTGTAAGTATCTGGAGTTaGTGCCACATGTACAAATTC +
Preference number: 2 (lower is better)
Translates to: SSLHLHKHWLSLHGLLYIVSIWS*CHMYKF
Trigger: GAATTTGTACATGTGGCACCAACTCCAGATACTTAC...AATATAGAGAAGACCATGCAGACTCAGCCAGTGCTTATGCAGATGAAGTGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505233.5
3UTR-3UTR CCA 90 bp AATCTTCCTTCCACTGTTATGAGCATCTTCAATGATTTTCTTCACTTCATCTGCCTGGCTGAGTCTGCATaGTCTTCTCTATATTTTCCT +
Preference number: 2 (lower is better)
Translates to: NLPSTVMSIFNDFLHFICLAESA*SSLYFP
Trigger: AGGAAAATATAGAGAAGACCATGCAGACTCAGCCAG...GCAGATGAAGTGAAGAAAATCATTGAAGATGCTCATAACAGTGGAAGGAAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505233.5
3UTR-3UTR CAA 90 bp AACTGCCGAGCCAGGCGTAAGGCTAAGTCGTTGGCTTCGGATCCTGAATTTGTAGTTTCTCCGGCAGAGTaGCTGAAAGGCGTTTGGCAT +
Preference number: 3 (lower is better)
Translates to: NCRARRKAKSLASDPEFVVSPAE*LKGVWH
Trigger: ATGCCAAACGCCTTTCAGCAACTCTGCCGGAGAAAC...TACAAATTCAGGATCCGAAGCCAACGACTTAGCCTTACGCCTGGCTCGGCAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509402.1
3UTR TCA 72 bp CTCCAGAAATGTTTCCCAACTCTGCCAAAGCCCACTTaGACTTCATCAGCTATAAACACACCCCCTGCACCG +
Preference number: 3 (lower is better)
Translates to: LQKCFPTLPKPT*TSSAINTPPAP
Trigger: CGGTGCAGGGGGTGTGTTTATAGCTGATGAAGTTCAAGTGGGCTTTGGCAGAGTTGGGAAACATTTCTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505233.5
3UTR CCA 72 bp GTGTACATATTCTGCCACTTTCTGGAAGTAGCCTGCTaGAGGAATTATTTGTCCGCCACAACTCTGCATGGA +
Preference number: 3 (lower is better)
Translates to: VYIFCHFLEVAC*RNYLSATTLHG
Trigger: TCCATGCAGAGTTGTGGCGGACAAATAATTCCTCCAGCAGGCTACTTCCAGAAAGTGGCAGAATATGTACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505233.5
3UTR TCA 72 bp TCAGCAATAAAGGCAGCAATCTTCCTTCCACTGTTATaGGCATCTTCAATGATTTTCTTCACTTCATCTGCA +
Preference number: 3 (lower is better)
Translates to: SAIKAAIFLPLL*ASSMIFFTSSA
Trigger: TGCAGATGAAGTGAAGAAAATCATTGAAGATGCTCATAACAGTGGAAGGAAGATTGCTGCCTTTATTGCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505233.5
CDS-3UTR CCA 90 bp AACTGCCGAGCCAGGCGTAAGGCTAAGTCGTTGGCTTCGGATCCTGAATTTGTAAGCCTGGGACTGCCTTaGCGGCCCCGGCCGGCCTTC +
Preference number: 4 (lower is better)
Translates to: NCRARRKAKSLASDPEFVSLGLP*RPRPAF
Trigger: GAAGGCCGGCCGGGGCCGCCAAGGCAGTCCCAGGCT...TACAAATTCAGGATCCGAAGCCAACGACTTAGCCTTACGCCTGGCTCGGCAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509402.1
CDS-3UTR CCA 90 bp AACTGCCGAGCCAGGCGTAAGGCTAAGTCGTTGGCTTCGGATCCTGAATTTGTACCTCCTACGCGAGCCTaGGACTGCCTTGGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: NCRARRKAKSLASDPEFVPPTRA*DCLGGP
Trigger: GGGGCCGCCAAGGCAGTCCCAGGCTCGCGTAGGAGG...TACAAATTCAGGATCCGAAGCCAACGACTTAGCCTTACGCCTGGCTCGGCAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509402.1
CDS-3UTR GCA 90 bp AACTGCCGAGCCAGGCGTAAGGCTAAGTCGTTGGCTTCGGATCCTGAATTTGTACACATGGTGGCGGGGTaGAGGGCGCTGCGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: NCRARRKAKSLASDPEFVHMVAG*RALRRC
Trigger: GCACCTTCGCAGCGCCCTGCACCCCGCCACCATGTG...TACAAATTCAGGATCCGAAGCCAACGACTTAGCCTTACGCCTGGCTCGGCAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509402.1
CDS-3UTR CCA 90 bp GCCAAAGCCCACTTGAACTTCATCAGCTATAAACACACCCCCTGCACCGTGTACACAGCTCGCACATGGTaGCGGGGTGCAGGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: AKAHLNFISYKHTPCTVYTARTW*RGAGRC
Trigger: GCAGCGCCCTGCACCCCGCCACCATGTGCGAGCTGT...GTACACGGTGCAGGGGGTGTGTTTATAGCTGATGAAGTTCAAGTGGGCTTTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505233.5
CDS-3UTR CCA 90 bp AACTGCCGAGCCAGGCGTAAGGCTAAGTCGTTGGCTTCGGATCCTGAATTTGTAACAGCTCGCACATGGTaGCGGGGTGCAGGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: NCRARRKAKSLASDPEFVTARTW*RGAGRC
Trigger: GCAGCGCCCTGCACCCCGCCACCATGTGCGAGCTGT...TACAAATTCAGGATCCGAAGCCAACGACTTAGCCTTACGCCTGGCTCGGCAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509402.1
CDS-3UTR GCA 90 bp AACTGCCGAGCCAGGCGTAAGGCTAAGTCGTTGGCTTCGGATCCTGAATTTGTACTCCTGGCGTTCTCTTaGCCGGGGCGTCGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: NCRARRKAKSLASDPEFVLLAFS*PGRRRS
Trigger: TGACCTCCGACGCCCCGGGCAAGAGAACGCCAGGAG...TACAAATTCAGGATCCGAAGCCAACGACTTAGCCTTACGCCTGGCTCGGCAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509402.1
CDS-3UTR GCA 90 bp AACTGCCGAGCCAGGCGTAAGGCTAAGTCGTTGGCTTCGGATCCTGAATTTGTAGCAAGGTGCAAGGTCTaGGCGCCTCCTACGCGAGCC +
Preference number: 4 (lower is better)
Translates to: NCRARRKAKSLASDPEFVARCKV*APPTRA
Trigger: GGCTCGCGTAGGAGGCGCGCAGACCTTGCACCTTGC...TACAAATTCAGGATCCGAAGCCAACGACTTAGCCTTACGCCTGGCTCGGCAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509402.1
CDS-3UTR GCA 90 bp AACTGCCGAGCCAGGCGTAAGGCTAAGTCGTTGGCTTCGGATCCTGAATTTGTACGGGGTGCAGGGCGCTaGGAAGGTGCAAGGTGCAAG +
Preference number: 4 (lower is better)
Translates to: NCRARRKAKSLASDPEFVRGAGR*EGARCK
Trigger: CTTGCACCTTGCACCTTCGCAGCGCCCTGCACCCCG...TACAAATTCAGGATCCGAAGCCAACGACTTAGCCTTACGCCTGGCTCGGCAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509402.1
CDS-3UTR CCA 90 bp GCCAAAGCCCACTTGAACTTCATCAGCTATAAACACACCCCCTGCACCGTGTACTGTACAGCTCGCACATaGTGGCGGGGTGCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: AKAHLNFISYKHTPCTVYCTART*WRGAGR
Trigger: GCGCCCTGCACCCCGCCACCATGTGCGAGCTGTACA...GTACACGGTGCAGGGGGTGTGTTTATAGCTGATGAAGTTCAAGTGGGCTTTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505233.5
CDS-3UTR CCA 90 bp AACTGCCGAGCCAGGCGTAAGGCTAAGTCGTTGGCTTCGGATCCTGAATTTGTATGTACAGCTCGCACATaGTGGCGGGGTGCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: NCRARRKAKSLASDPEFVCTART*WRGAGR
Trigger: GCGCCCTGCACCCCGCCACCATGTGCGAGCTGTACA...TACAAATTCAGGATCCGAAGCCAACGACTTAGCCTTACGCCTGGCTCGGCAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509402.1
CDS-3UTR GCA 90 bp AACTGCCGAGCCAGGCGTAAGGCTAAGTCGTTGGCTTCGGATCCTGAATTTGTAAGGGCGCTGCGAAGGTaGAAGGTGCAAGGTCTGCGC +
Preference number: 4 (lower is better)
Translates to: NCRARRKAKSLASDPEFVRALRR*KVQGLR
Trigger: GCGCAGACCTTGCACCTTGCACCTTCGCAGCGCCCT...TACAAATTCAGGATCCGAAGCCAACGACTTAGCCTTACGCCTGGCTCGGCAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509402.1
CDS-3UTR GCA 90 bp ACCATACATCTGGAAGCTCCAGAAATGTTTCCCAACTCTGCCAAAGCCCACTTGCACATGGTGGCGGGGTaGAGGGCGCTGCGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: TIHLEAPEMFPNSAKAHLHMVAG*RALRRC
Trigger: GCACCTTCGCAGCGCCCTGCACCCCGCCACCATGTG...CAAGTGGGCTTTGGCAGAGTTGGGAAACATTTCTGGAGCTTCCAGATGTATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505233.5
CDS-3UTR CCA 90 bp AACTGCCGAGCCAGGCGTAAGGCTAAGTCGTTGGCTTCGGATCCTGAATTTGTATCCCGTTATCCCTCCTaGCGTTCTCTTGCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: NCRARRKAKSLASDPEFVSRYPS*RSLARG
Trigger: GCCCCGGGCAAGAGAACGCCAGGAGGGATAACGGGA...TACAAATTCAGGATCCGAAGCCAACGACTTAGCCTTACGCCTGGCTCGGCAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509402.1
CDS-3UTR GCA 90 bp AACTGCCGAGCCAGGCGTAAGGCTAAGTCGTTGGCTTCGGATCCTGAATTTGTATGCGAAGGTGCAAGGTaGAAGGTCTGCGCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: NCRARRKAKSLASDPEFVCEGAR*KVCAPP
Trigger: AGGAGGCGCGCAGACCTTGCACCTTGCACCTTCGCA...TACAAATTCAGGATCCGAAGCCAACGACTTAGCCTTACGCCTGGCTCGGCAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509402.1
CDS-3UTR GCA 90 bp AACTGCCGAGCCAGGCGTAAGGCTAAGTCGTTGGCTTCGGATCCTGAATTTGTATGGTGGCCTCTGAACTaGCGAGCCAGGCGTAAGGCT +
Preference number: 4 (lower is better)
Translates to: NCRARRKAKSLASDPEFVWWPLN*RARRKA
Trigger: AGCCTTACGCCTGGCTCGGCAGTTCAGAGGCCACCA...TACAAATTCAGGATCCGAAGCCAACGACTTAGCCTTACGCCTGGCTCGGCAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509402.1
CDS-3UTR TCA 90 bp TCCGCCACAACTCTGCATGGATTCAGCAATAAAGGCAGCAATCTTCCTTCCACTCATCCTGGTGGCCTCTaGACTGCCGAGCCAGGCGTA +
Preference number: 4 (lower is better)
Translates to: SATTLHGFSNKGSNLPSTHPGGL*TAEPGV
Trigger: TACGCCTGGCTCGGCAGTTCAGAGGCCACCAGGATG...AGTGGAAGGAAGATTGCTGCCTTTATTGCTGAATCCATGCAGAGTTGTGGCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505233.5
CDS-3UTR TCA 90 bp AACTGCCGAGCCAGGCGTAAGGCTAAGTCGTTGGCTTCGGATCCTGAATTTGTATTGACCACTCCTGGGTaGCAGTGTCCCACCGATGTG +
Preference number: 4 (lower is better)
Translates to: NCRARRKAKSLASDPEFVLTTPG*QCPTDV
Trigger: CACATCGGTGGGACACTGTCACCCAGGAGTGGTCAA...TACAAATTCAGGATCCGAAGCCAACGACTTAGCCTTACGCCTGGCTCGGCAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509402.1
CDS-3UTR TCA 90 bp AACTGCCGAGCCAGGCGTAAGGCTAAGTCGTTGGCTTCGGATCCTGAATTTGTAGTTTCAGGGCAGCTTTaGCCACTCCTGGGTGACAGT +
Preference number: 4 (lower is better)
Translates to: NCRARRKAKSLASDPEFVVSGQL*PLLGDS
Trigger: ACTGTCACCCAGGAGTGGTCAAAGCTGCCCTGAAAC...TACAAATTCAGGATCCGAAGCCAACGACTTAGCCTTACGCCTGGCTCGGCAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509402.1
CDS-3UTR TCA 90 bp AACTGCCGAGCCAGGCGTAAGGCTAAGTCGTTGGCTTCGGATCCTGAATTTGTACTCCGGCAGAGTTGCTaGAAGGCGTTTGGCATACTC +
Preference number: 4 (lower is better)
Translates to: NCRARRKAKSLASDPEFVLRQSC*KAFGIL
Trigger: GAGTATGCCAAACGCCTTTCAGCAACTCTGCCGGAG...TACAAATTCAGGATCCGAAGCCAACGACTTAGCCTTACGCCTGGCTCGGCAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509402.1
CDS-3UTR GCA 90 bp AGTAGCCTGCTGGAGGAATTATTTGTCCGCCACAACTCTGCATGGATTCAGCAATGGTGGCCTCTGAACTaGCGAGCCAGGCGTAAGGCT +
Preference number: 4 (lower is better)
Translates to: SSLLEELFVRHNSAWIQQWWPLN*RARRKA
Trigger: AGCCTTACGCCTGGCTCGGCAGTTCAGAGGCCACCA...TTGCTGAATCCATGCAGAGTTGTGGCGGACAAATAATTCCTCCAGCAGGCTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505233.5
CDS-3UTR GCA 90 bp AACTGCCGAGCCAGGCGTAAGGCTAAGTCGTTGGCTTCGGATCCTGAATTTGTAAGTGTCCCACCGATGTaGTTCTTCCTCAGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: NCRARRKAKSLASDPEFVSVPPM*FFLSPR
Trigger: TCTGGGGCTGAGGAAGAAGCACATCGGTGGGACACT...TACAAATTCAGGATCCGAAGCCAACGACTTAGCCTTACGCCTGGCTCGGCAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509402.1
CDS-3UTR CCA 90 bp CACATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAAGCCTGGGACTGCCTTaGCGGCCCCGGCCGGCCTTC +
Preference number: 4 (lower is better)
Translates to: HIYSFSVTLDIASCFKMQSLGLP*RPRPAF
Trigger: GAAGGCCGGCCGGGGCCGCCAAGGCAGTCCCAGGCT...TTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR CCA 90 bp AACTGCCGAGCCAGGCGTAAGGCTAAGTCGTTGGCTTCGGATCCTGAATTTGTAAGCTTTGACCACTCCTaGGTGACAGTGTCCCACCGA +
Preference number: 4 (lower is better)
Translates to: NCRARRKAKSLASDPEFVSFDHS*VTVSHR
Trigger: TCGGTGGGACACTGTCACCCAGGAGTGGTCAAAGCT...TACAAATTCAGGATCCGAAGCCAACGACTTAGCCTTACGCCTGGCTCGGCAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509402.1
CDS-3UTR TCA 90 bp AACTGCCGAGCCAGGCGTAAGGCTAAGTCGTTGGCTTCGGATCCTGAATTTGTAAAGCATGGTCAAGAGTaGTCACATCCTGGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: NCRARRKAKSLASDPEFVKHGQE*SHPGGL
Trigger: GAGGCCACCAGGATGTGATCACTCTTGACCATGCTT...TACAAATTCAGGATCCGAAGCCAACGACTTAGCCTTACGCCTGGCTCGGCAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509402.1
CDS-3UTR CCA 90 bp ACTGACAATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATAGCCTGGGACTGCCTTaGCGGCCCCGGCCGGCCTTC +
Preference number: 4 (lower is better)
Translates to: TDNSTFRGIIELLTDETHSLGLP*RPRPAF
Trigger: GAAGGCCGGCCGGGGCCGCCAAGGCAGTCCCAGGCT...ATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATTGTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR CCA 90 bp TCCGCCACAACTCTGCATGGATTCAGCAATAAAGGCAGCAATCTTCCTTCCACTGTGATCACATCCTGGTaGCCTCTGAACTGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: SATTLHGFSNKGSNLPSTVITSW*PLNCRA
Trigger: GGCTCGGCAGTTCAGAGGCCACCAGGATGTGATCAC...AGTGGAAGGAAGATTGCTGCCTTTATTGCTGAATCCATGCAGAGTTGTGGCGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505233.5
CDS-3UTR CCA 90 bp CCCAACTCTGCCAAAGCCCACTTGAACTTCATCAGCTATAAACACACCCCCTGCAGAGTGATCACATCCTaGTGGCCTCTGAACTGCCGA +
Preference number: 4 (lower is better)
Translates to: PNSAKAHLNFISYKHTPCRVITS*WPLNCR
Trigger: TCGGCAGTTCAGAGGCCACCAGGATGTGATCACTCT...GCAGGGGGTGTGTTTATAGCTGATGAAGTTCAAGTGGGCTTTGGCAGAGTTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505233.5
CDS-3UTR GCA 90 bp CACATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAACACATGGTGGCGGGGTaGAGGGCGCTGCGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: HIYSFSVTLDIASCFKMQHMVAG*RALRRC
Trigger: GCACCTTCGCAGCGCCCTGCACCCCGCCACCATGTG...TTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CCA 90 bp AATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCCCTCCTACGCGAGCCTaGGACTGCCTTGGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: NSTFRGIIELLTDETHLLPPTRA*DCLGGP
Trigger: GGGGCCGCCAAGGCAGTCCCAGGCTCGCGTAGGAGG...GAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR GCA 90 bp CACATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAACGGGGTGCAGGGCGCTaGGAAGGTGCAAGGTGCAAG +
Preference number: 4 (lower is better)
Translates to: HIYSFSVTLDIASCFKMQRGAGR*EGARCK
Trigger: CTTGCACCTTGCACCTTCGCAGCGCCCTGCACCCCG...TTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR GCA 90 bp AATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCCACATGGTGGCGGGGTaGAGGGCGCTGCGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: NSTFRGIIELLTDETHLLHMVAG*RALRRC
Trigger: GCACCTTCGCAGCGCCCTGCACCCCGCCACCATGTG...GAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR GCA 90 bp AGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACCACATGGTGGCGGGGTaGAGGGCGCTGCGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: RGIIELLTDETHLLILCNHMVAG*RALRRC
Trigger: GCACCTTCGCAGCGCCCTGCACCCCGCCACCATGTG...GTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CCA 90 bp ACTGACAATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATACAGCTCGCACATGGTaGCGGGGTGCAGGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: TDNSTFRGIIELLTDETHTARTW*RGAGRC
Trigger: GCAGCGCCCTGCACCCCGCCACCATGTGCGAGCTGT...ATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATTGTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR CCA 90 bp AGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACACAGCTCGCACATGGTaGCGGGGTGCAGGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: RGIIELLTDETHLLILCNTARTW*RGAGRC
Trigger: GCAGCGCCCTGCACCCCGCCACCATGTGCGAGCTGT...GTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CCA 90 bp GGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTCTACAGCTCGCACATGGTaGCGGGGTGCAGGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: GIIELLTDETHLLILCNSTARTW*RGAGRC
Trigger: GCAGCGCCCTGCACCCCGCCACCATGTGCGAGCTGT...AGAGTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
3UTR CAA 72 bp GCTCCAGAAATGTTTCCCAACTCTGCCAAAGCCCACTaGAACTTCATCAGCTATAAACACACCCCCTGCACC +
Preference number: 4 (lower is better)
Translates to: APEMFPNSAKAH*NFISYKHTPCT
Trigger: GGTGCAGGGGGTGTGTTTATAGCTGATGAAGTTCAAGTGGGCTTTGGCAGAGTTGGGAAACATTTCTGGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505233.5
CDS-3UTR TCA 90 bp CCCAACTCTGCCAAAGCCCACTTGAACTTCATCAGCTATAAACACACCCCCTGCCTGCCAAAGCCCACTTaGACTTCATCAGCTATAAAC +
Preference number: 4 (lower is better)
Translates to: PNSAKAHLNFISYKHTPCLPKPT*TSSAIN
Trigger: GTTTATAGCTGATGAAGTTCAAGTGGGCTTTGGCAG...GCAGGGGGTGTGTTTATAGCTGATGAAGTTCAAGTGGGCTTTGGCAGAGTTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505233.5
CDS-3UTR GCA 90 bp AATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCCTCCTGGCGTTCTCTTaGCCGGGGCGTCGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: NSTFRGIIELLTDETHLLLLAFS*PGRRRS
Trigger: TGACCTCCGACGCCCCGGGCAAGAGAACGCCAGGAG...GAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296486.8
CDS-3UTR GCA 90 bp AGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACGCAAGGTGCAAGGTCTaGGCGCCTCCTACGCGAGCC +
Preference number: 4 (lower is better)
Translates to: RGIIELLTDETHLLILCNARCKV*APPTRA
Trigger: GGCTCGCGTAGGAGGCGCGCAGACCTTGCACCTTGC...GTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR GCA 90 bp ATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAATCGCAAGGTGCAAGGTCTaGGCGCCTCCTACGCGAGCC +
Preference number: 4 (lower is better)
Translates to: IYSFSVTLDIASCFKMQIARCKV*APPTRA
Trigger: GGCTCGCGTAGGAGGCGCGCAGACCTTGCACCTTGC...GATTTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR GCA 90 bp CACATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAAGGGCGCTGCGAAGGTaGAAGGTGCAAGGTCTGCGC +
Preference number: 4 (lower is better)
Translates to: HIYSFSVTLDIASCFKMQRALRR*KVQGLR
Trigger: GCGCAGACCTTGCACCTTGCACCTTCGCAGCGCCCT...TTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR GCA 90 bp AATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCCGGGGTGCAGGGCGCTaGGAAGGTGCAAGGTGCAAG +
Preference number: 4 (lower is better)
Translates to: NSTFRGIIELLTDETHLLRGAGR*EGARCK
Trigger: CTTGCACCTTGCACCTTCGCAGCGCCCTGCACCCCG...GAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR GCA 90 bp GGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTCTCGGGGTGCAGGGCGCTaGGAAGGTGCAAGGTGCAAG +
Preference number: 4 (lower is better)
Translates to: GIIELLTDETHLLILCNSRGAGR*EGARCK
Trigger: CTTGCACCTTGCACCTTCGCAGCGCCCTGCACCCCG...AGAGTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CCA 90 bp ATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAATCTGTACAGCTCGCACATaGTGGCGGGGTGCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: IYSFSVTLDIASCFKMQICTART*WRGAGR
Trigger: GCGCCCTGCACCCCGCCACCATGTGCGAGCTGTACA...GATTTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CCA 90 bp GGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTCTTGTACAGCTCGCACATaGTGGCGGGGTGCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: GIIELLTDETHLLILCNSCTART*WRGAGR
Trigger: GCGCCCTGCACCCCGCCACCATGTGCGAGCTGTACA...AGAGTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CCA 90 bp AGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTGTACAGCTCGCACATaGTGGCGGGGTGCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: RGIIELLTDETHLLILCNCTART*WRGAGR
Trigger: GCGCCCTGCACCCCGCCACCATGTGCGAGCTGTACA...GTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CCA 90 bp AACTGCCGAGCCAGGCGTAAGGCTAAGTCGTTGGCTTCGGATCCTGAATTTGTAGTAAGGCTAAGTCGTTaGCTTCGGATCCTGAATTTG +
Preference number: 4 (lower is better)
Translates to: NCRARRKAKSLASDPEFVVRLSR*LRILNL
Trigger: CAAATTCAGGATCCGAAGCCAACGACTTAGCCTTAC...TACAAATTCAGGATCCGAAGCCAACGACTTAGCCTTACGCCTGGCTCGGCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509402.1
CDS-3UTR CCA 90 bp AACTGCCGAGCCAGGCGTAAGGCTAAGTCGTTGGCTTCGGATCCTGAATTTGTATCCTCTGTAAGTATCTaGAGTTGGTGCCACATGTAC +
Preference number: 4 (lower is better)
Translates to: NCRARRKAKSLASDPEFVSSVSI*SWCHMY
Trigger: GTACATGTGGCACCAACTCCAGATACTTACAGAGGA...TACAAATTCAGGATCCGAAGCCAACGACTTAGCCTTACGCCTGGCTCGGCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509402.1
CDS-3UTR CCA 90 bp ACCATACATCTGGAAGCTCCAGAAATGTTTCCCAACTCTGCCAAAGCCCACTTGCTGGAAGTAGCCTGCTaGAGGAATTATTTGTCCGCC +
Preference number: 4 (lower is better)
Translates to: TIHLEAPEMFPNSAKAHLLEVAC*RNYLSA
Trigger: GGCGGACAAATAATTCCTCCAGCAGGCTACTTCCAG...CAAGTGGGCTTTGGCAGAGTTGGGAAACATTTCTGGAGCTTCCAGATGTATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505233.5
CDS-3UTR CCA 90 bp ACCATACATCTGGAAGCTCCAGAAATGTTTCCCAACTCTGCCAAAGCCCACTTGGTAAGGCTAAGTCGTTaGCTTCGGATCATGGGCAAC +
Preference number: 4 (lower is better)
Translates to: TIHLEAPEMFPNSAKAHLVRLSR*LRIMGN
Trigger: GTTGCCCATGATCCGAAGCCAACGACTTAGCCTTAC...CAAGTGGGCTTTGGCAGAGTTGGGAAACATTTCTGGAGCTTCCAGATGTATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505233.5
CDS-3UTR TCA 90 bp AGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACCATCCTGGTGGCCTCTaGACTGCCGAGCCAGGCGTA +
Preference number: 4 (lower is better)
Translates to: RGIIELLTDETHLLILCNHPGGL*TAEPGV
Trigger: TACGCCTGGCTCGGCAGTTCAGAGGCCACCAGGATG...GTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR TCA 90 bp AATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCCATCCTGGTGGCCTCTaGACTGCCGAGCCAGGCGTA +
Preference number: 4 (lower is better)
Translates to: NSTFRGIIELLTDETHLLHPGGL*TAEPGV
Trigger: TACGCCTGGCTCGGCAGTTCAGAGGCCACCAGGATG...GAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR TCA 90 bp TATTTGTCCGCCACAACTCTGCATGGATTCAGCAATAAAGGCAGCAATCTTCCTAAGCATGGTCAAGAGTaGTCACATCCTGGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: YLSATTLHGFSNKGSNLPKHGQE*SHPGGL
Trigger: GAGGCCACCAGGATGTGATCACTCTTGACCATGCTT...AGGAAGATTGCTGCCTTTATTGCTGAATCCATGCAGAGTTGTGGCGGACAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505233.5
CDS-3UTR TCA 90 bp CACATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAATTGACCACTCCTGGGTaGCAGTGTCCCATTCCGGGC +
Preference number: 4 (lower is better)
Translates to: HIYSFSVTLDIASCFKMQLTTPG*QCPIPG
Trigger: GCCCGGAATGGGACACTGTCACCCAGGAGTGGTCAA...TTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512646.5
CDS-3UTR GCA 90 bp AGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACAGGGCGCTGCGAAGGTaGAAGGTGCAAGGTCTGCGC +
Preference number: 4 (lower is better)
Translates to: RGIIELLTDETHLLILCNRALRR*KVQGLR
Trigger: GCGCAGACCTTGCACCTTGCACCTTCGCAGCGCCCT...GTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR GCA 90 bp CACATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAATGGTGGCCTCTGAACTaGCGAGCCAGGCGTAAGGCT +
Preference number: 4 (lower is better)
Translates to: HIYSFSVTLDIASCFKMQWWPLN*RARRKA
Trigger: AGCCTTACGCCTGGCTCGGCAGTTCAGAGGCCACCA...TTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR GCA 90 bp CACATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAACCACCGGGTGGCCGTTaGCCATCGGTTTTCCCATTG +
Preference number: 4 (lower is better)
Translates to: HIYSFSVTLDIASCFKMQPPGGR*PSVFPL
Trigger: CAATGGGAAAACCGATGGGCAACGGCCACCCGGTGG...TTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CCA 90 bp ATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAATCTCCCGTTATCCCTCCTaGCGTTCTCTTGCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: IYSFSVTLDIASCFKMQISRYPS*RSLARG
Trigger: GCCCCGGGCAAGAGAACGCCAGGAGGGATAACGGGA...GATTTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296486.8
CDS-3UTR TCA 90 bp CACATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAATTGACCACTCCTGGGTaGCAGTGTCCCACATGGGCA +
Preference number: 4 (lower is better)
Translates to: HIYSFSVTLDIASCFKMQLTTPG*QCPTWA
Trigger: TGCCCATGTGGGACACTGTCACCCAGGAGTGGTCAA...TTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296486.8
CDS-3UTR GCA 90 bp AGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTGCGAAGGTGCAAGGTaGAAGGTCTGCGCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: RGIIELLTDETHLLILCNCEGAR*KVCAPP
Trigger: AGGAGGCGCGCAGACCTTGCACCTTGCACCTTCGCA...GTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR GCA 90 bp ATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAATCTGCGAAGGTGCAAGGTaGAAGGTCTGCGCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: IYSFSVTLDIASCFKMQICEGAR*KVCAPP
Trigger: AGGAGGCGCGCAGACCTTGCACCTTGCACCTTCGCA...GATTTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR GCA 90 bp GGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTCTTGCGAAGGTGCAAGGTaGAAGGTCTGCGCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GIIELLTDETHLLILCNSCEGAR*KVCAPP
Trigger: AGGAGGCGCGCAGACCTTGCACCTTGCACCTTCGCA...AGAGTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR GCA 90 bp CACATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAACATGAGGGCCCGATGTaGTTCTTCCTCAGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: HIYSFSVTLDIASCFKMQHEGPM*FFLSPR
Trigger: TCTGGGGCTGAGGAAGAAGCACATCGGGCCCTCATG...TTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR GCA 90 bp AGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTGGTGGCCTCTGAACTaGCGAGCCAGGCGTAAGGCT +
Preference number: 4 (lower is better)
Translates to: RGIIELLTDETHLLILCNWWPLN*RARRKA
Trigger: AGCCTTACGCCTGGCTCGGCAGTTCAGAGGCCACCA...GTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR GCA 90 bp GCCCACTTGAACTTCATCAGCTATAAACACACCCCCTGCACCGTGTACATATTCTATAAACACACCCCCTaGACCGTGTACATATTCTGC +
Preference number: 4 (lower is better)
Translates to: AHLNFISYKHTPCTVYIFYKHTP*TVYIFC
Trigger: GCAGAATATGTACACGGTGCAGGGGGTGTGTTTATA...GAATATGTACACGGTGCAGGGGGTGTGTTTATAGCTGATGAAGTTCAAGTGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000505233.5
CDS-3UTR GCA 90 bp ATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAATCGGTTGTTACCACACATaGCACCGGGTGGCCGTTGCC +
Preference number: 4 (lower is better)
Translates to: IYSFSVTLDIASCFKMQIGCYHT*HRVAVA
Trigger: GGCAACGGCCACCCGGTGGCATGTGTGGTAACAACC...GATTTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR GCA 90 bp AGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACGGTTGTTACCACACATaGCACCGGGTGGCCGTTGCC +
Preference number: 4 (lower is better)
Translates to: RGIIELLTDETHLLILCNGCYHT*HRVAVA
Trigger: GGCAACGGCCACCCGGTGGCATGTGTGGTAACAACC...GTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR GCA 90 bp GGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTCTCATTCCGGGCCAGGGTaGCCTTACCCGATGTGCTTC +
Preference number: 4 (lower is better)
Translates to: GIIELLTDETHLLILCNSHSGPG*PYPMCF
Trigger: GAAGCACATCGGGTAAGGGCACCCTGGCCCGGAATG...AGAGTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512646.5
CDS-3UTR CCA 90 bp AACTGCCGAGCCAGGCGTAAGGCTAAGTCGTTGGCTTCGGATCCTGAATTTGTATTGCTGAAAGGCGTTTaGCATACTCAACAATGTTGT +
Preference number: 4 (lower is better)
Translates to: NCRARRKAKSLASDPEFVLLKGV*HTQQCC
Trigger: ACAACATTGTTGAGTATGCCAAACGCCTTTCAGCAA...TACAAATTCAGGATCCGAAGCCAACGACTTAGCCTTACGCCTGGCTCGGCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509402.1
CDS-3UTR CCA 90 bp AACTGCCGAGCCAGGCGTAAGGCTAAGTCGTTGGCTTCGGATCCTGAATTTGTAGTAAGTATCTGGAGTTaGTGCCACATGTACAAATTC +
Preference number: 4 (lower is better)
Translates to: NCRARRKAKSLASDPEFVVSIWS*CHMYKF
Trigger: GAATTTGTACATGTGGCACCAACTCCAGATACTTAC...TACAAATTCAGGATCCGAAGCCAACGACTTAGCCTTACGCCTGGCTCGGCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509402.1
CDS-3UTR TCA 90 bp CACATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAACTCCGGCAGAGTTGCTaGAAGGCGTTTGGCATACTC +
Preference number: 4 (lower is better)
Translates to: HIYSFSVTLDIASCFKMQLRQSC*KAFGIL
Trigger: GAGTATGCCAAACGCCTTTCAGCAACTCTGCCGGAG...TTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR TCA 90 bp AACTGCCGAGCCAGGCGTAAGGCTAAGTCGTTGGCTTCGGATCCTGAATTTGTAGTTGGCTTCGGATCCTaGATTTGTAAAATAACAAAC +
Preference number: 4 (lower is better)
Translates to: NCRARRKAKSLASDPEFVVGFGS*ICKITN
Trigger: GTTTGTTATTTTACAAATTCAGGATCCGAAGCCAAC...TACAAATTCAGGATCCGAAGCCAACGACTTAGCCTTACGCCTGGCTCGGCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509402.1
CDS-3UTR GCA 90 bp AATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCCATGAGGGCCCGATGTaGTTCTTCCTCAGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: NSTFRGIIELLTDETHLLHEGPM*FFLSPR
Trigger: TCTGGGGCTGAGGAAGAAGCACATCGGGCCCTCATG...GAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR GCA 90 bp AATCTTCCTTCCACTGTTATGAGCATCTTCAATGATTTTCTTCACTTCATCTGCCATGAGGGCCCGATGTaGTTCTTCCTCAGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: NLPSTVMSIFNDFLHFICHEGPM*FFLSPR
Trigger: TCTGGGGCTGAGGAAGAAGCACATCGGGCCCTCATG...GCAGATGAAGTGAAGAAAATCATTGAAGATGCTCATAACAGTGGAAGGAAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505233.5
CDS-3UTR GCA 90 bp ACCATACATCTGGAAGCTCCAGAAATGTTTCCCAACTCTGCCAAAGCCCACTTGTTTCTGGAAGTAGCCTaGTGGAGGAATTATTTGTCC +
Preference number: 4 (lower is better)
Translates to: TIHLEAPEMFPNSAKAHLFLEVA*WRNYLS
Trigger: GGACAAATAATTCCTCCAGCAGGCTACTTCCAGAAA...CAAGTGGGCTTTGGCAGAGTTGGGAAACATTTCTGGAGCTTCCAGATGTATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505233.5
CDS-3UTR GCA 90 bp CACATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAATGCCCTTACCCGATGTaGTTCTTCCTCAGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: HIYSFSVTLDIASCFKMQCPYPM*FFLSPR
Trigger: TCTGGGGCTGAGGAAGAAGCACATCGGGTAAGGGCA...TTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512646.5
CDS-3UTR CCA 90 bp AACTGCCGAGCCAGGCGTAAGGCTAAGTCGTTGGCTTCGGATCCTGAATTTGTATCAACAATGTTGTCGTaGAGGAATCGAGAATTTGTA +
Preference number: 4 (lower is better)
Translates to: NCRARRKAKSLASDPEFVSTMLS*RNREFV
Trigger: TACAAATTCTCGATTCCTCCACGACAACATTGTTGA...TACAAATTCAGGATCCGAAGCCAACGACTTAGCCTTACGCCTGGCTCGGCAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509402.1
CDS-3UTR CCA 90 bp ATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAATCGTGATCACATCCTGGTaGCCTCTGAACTGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: IYSFSVTLDIASCFKMQIVITSW*PLNCRA
Trigger: GGCTCGGCAGTTCAGAGGCCACCAGGATGTGATCAC...GATTTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CCA 90 bp GGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTCTGTGATCACATCCTGGTaGCCTCTGAACTGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: GIIELLTDETHLLILCNSVITSW*PLNCRA
Trigger: GGCTCGGCAGTTCAGAGGCCACCAGGATGTGATCAC...AGAGTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CCA 90 bp CATACATCTGGAAGCTCCAGAAATGTTTCCCAACTCTGCCAAAGCCCACTTGAATCCTCTGTAAGTATCTaGAGTTGGTGCCACATGTAC +
Preference number: 4 (lower is better)
Translates to: HTSGSSRNVSQLCQSPLESSVSI*SWCHMY
Trigger: GTACATGTGGCACCAACTCCAGATACTTACAGAGGA...TTCAAGTGGGCTTTGGCAGAGTTGGGAAACATTTCTGGAGCTTCCAGATGTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505233.5
CDS-3UTR CCA 90 bp AGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACACACATGCCACCGGGTaGCCGTTGCCCATCGGTTTT +
Preference number: 4 (lower is better)
Translates to: RGIIELLTDETHLLILCNTHATG*PLPIGF
Trigger: AAAACCGATGGGCAACGGCCACCCGGTGGCATGTGT...GTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CCA 90 bp ATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAATCACACATGCCACCGGGTaGCCGTTGCCCATCGGTTTT +
Preference number: 4 (lower is better)
Translates to: IYSFSVTLDIASCFKMQITHATG*PLPIGF
Trigger: AAAACCGATGGGCAACGGCCACCCGGTGGCATGTGT...GATTTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR TCA 90 bp GGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTCTGTTTCAGGGCAGCTTTaGCCACTCCTGGGTGACAGT +
Preference number: 4 (lower is better)
Translates to: GIIELLTDETHLLILCNSVSGQL*PLLGDS
Trigger: ACTGTCACCCAGGAGTGGTCAAAGCTGCCCTGAAAC...AGAGTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000512646.5
CDS-3UTR TCA 90 bp AGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACGTTTCAGGGCAGCTTTaGCCACTCCTGGGTGACAGT +
Preference number: 4 (lower is better)
Translates to: RGIIELLTDETHLLILCNVSGQL*PLLGDS
Trigger: ACTGTCACCCAGGAGTGGTCAAAGCTGCCCTGAAAC...GTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000512646.5
CDS-3UTR TCA 90 bp GGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTCTCTCCGGCAGAGTTGCTaGAAGGCGTTTGGCATACTC +
Preference number: 4 (lower is better)
Translates to: GIIELLTDETHLLILCNSLRQSC*KAFGIL
Trigger: GAGTATGCCAAACGCCTTTCAGCAACTCTGCCGGAG...AGAGTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR TCA 90 bp ATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAATCCTCCGGCAGAGTTGCTaGAAGGCGTTTGGCATACTC +
Preference number: 4 (lower is better)
Translates to: IYSFSVTLDIASCFKMQILRQSC*KAFGIL
Trigger: GAGTATGCCAAACGCCTTTCAGCAACTCTGCCGGAG...GATTTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR TCA 90 bp CACATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAAAGCATGGTCAAGAGTaGTCACATCCTGGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: HIYSFSVTLDIASCFKMQKHGQE*SHPGGL
Trigger: GAGGCCACCAGGATGTGATCACTCTTGACCATGCTT...TTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR GCA 90 bp TATTTGTCCGCCACAACTCTGCATGGATTCAGCAATAAAGGCAGCAATCTTCCTTGTCCGCCACAACTCTaGATGGATTCAGCAATAAAG +
Preference number: 4 (lower is better)
Translates to: YLSATTLHGFSNKGSNLPCPPQL*MDSAIK
Trigger: CTTTATTGCTGAATCCATGCAGAGTTGTGGCGGACA...AGGAAGATTGCTGCCTTTATTGCTGAATCCATGCAGAGTTGTGGCGGACAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505233.5
CDS-3UTR CCA 90 bp CACATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAAGAGTGATCACATCCTaGTGGCCTCTGAACTGCCGA +
Preference number: 4 (lower is better)
Translates to: HIYSFSVTLDIASCFKMQRVITS*WPLNCR
Trigger: TCGGCAGTTCAGAGGCCACCAGGATGTGATCACTCT...TTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CCA 90 bp AGGAATTATTTGTCCGCCACAACTCTGCATGGATTCAGCAATAAAGGCAGCAATGTTGGCTTCGGATCATaGGCAACATTGTTGATGCAG +
Preference number: 4 (lower is better)
Translates to: RNYLSATTLHGFSNKGSNVGFGS*ATLLMQ
Trigger: CTGCATCAACAATGTTGCCCATGATCCGAAGCCAAC...ATTGCTGCCTTTATTGCTGAATCCATGCAGAGTTGTGGCGGACAAATAATTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505233.5
CDS-3UTR TCA 90 bp GGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTCTAAGCATGGTCAAGAGTaGTCACATCCTGGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: GIIELLTDETHLLILCNSKHGQE*SHPGGL
Trigger: GAGGCCACCAGGATGTGATCACTCTTGACCATGCTT...AGAGTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR TCA 90 bp CACATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAATGCATAAGCACTGGCTaGGTCTGCATGGTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: HIYSFSVTLDIASCFKMQCISTG*VCMVFS
Trigger: AGAGAAGACCATGCAGACTCAGCCAGTGCTTATGCA...TTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR TCA 90 bp GTCTTCTCTATATTTTCCTCTGTAAGTATCTGGAGTTGGTGCCACATGTACAAATGCATAAGCACTGGCTaGGTCTGCATGGTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: VFSIFSSVSIWSWCHMYKCISTG*VCMVFS
Trigger: AGAGAAGACCATGCAGACTCAGCCAGTGCTTATGCA...TTTGTACATGTGGCACCAACTCCAGATACTTACAGAGGAAAATATAGAGAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505233.5
CDS-3UTR TCA 90 bp GGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTCTGTTTCAGGGCAGCTTTaGCCACTCCATGGGCAACAT +
Preference number: 4 (lower is better)
Translates to: GIIELLTDETHLLILCNSVSGQL*PLHGQH
Trigger: ATGTTGCCCATGGAGTGGTCAAAGCTGCCCTGAAAC...AGAGTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411864.6
CDS-3UTR GCA 90 bp TCTTCACTTCATCTGCATAAGCACTGGCTGAGTCTGCATGGTCTTCTCTATATTATGCAAAGAAAACTTTaGATGAGGGCCCGATGTGCT +
Preference number: 4 (lower is better)
Translates to: SSLHLHKHWLSLHGLLYIMQRKL*MRARCA
Trigger: AGCACATCGGGCCCTCATGCAAAGTTTTCTTTGCAT...AATATAGAGAAGACCATGCAGACTCAGCCAGTGCTTATGCAGATGAAGTGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505233.5
CDS-3UTR GCA 90 bp TATTTGTCCGCCACAACTCTGCATGGATTCAGCAATAAAGGCAGCAATCTTCCTAATGTTTCCCAACTCTaGCAAAGCCCACTTGAACTT +
Preference number: 4 (lower is better)
Translates to: YLSATTLHGFSNKGSNLPNVSQL*QSPLEL
Trigger: AAGTTCAAGTGGGCTTTGGCAGAGTTGGGAAACATT...AGGAAGATTGCTGCCTTTATTGCTGAATCCATGCAGAGTTGTGGCGGACAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505233.5
CDS-3UTR CCA 90 bp GGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTCTAGCTTTGACCACTCCTaGGTGACAGTGTCCCACATG +
Preference number: 4 (lower is better)
Translates to: GIIELLTDETHLLILCNSSFDHS*VTVSHM
Trigger: CATGTGGGACACTGTCACCCAGGAGTGGTCAAAGCT...AGAGTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296486.8
CDS-3UTR CCA 90 bp AATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCAGAGTGATCACATCCTaGTGGCCTCTGAACTGCCGA +
Preference number: 4 (lower is better)
Translates to: NSTFRGIIELLTDETHLLRVITS*WPLNCR
Trigger: TCGGCAGTTCAGAGGCCACCAGGATGTGATCACTCT...GAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR CCA 90 bp AGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACAGAGTGATCACATCCTaGTGGCCTCTGAACTGCCGA +
Preference number: 4 (lower is better)
Translates to: RGIIELLTDETHLLILCNRVITS*WPLNCR
Trigger: TCGGCAGTTCAGAGGCCACCAGGATGTGATCACTCT...GTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CCA 90 bp CACATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAACTGGAAGTAGCCTGCTaGAGGAATTATTTGTCCGCC +
Preference number: 4 (lower is better)
Translates to: HIYSFSVTLDIASCFKMQLEVAC*RNYLSA
Trigger: GGCGGACAAATAATTCCTCCAGCAGGCTACTTCCAG...TTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CCA 90 bp CATACATCTGGAAGCTCCAGAAATGTTTCCCAACTCTGCCAAAGCCCACTTGAATCTTCACCATACATCTaGAAGCTCCAGAAATGTTTC +
Preference number: 4 (lower is better)
Translates to: HTSGSSRNVSQLCQSPLESSPYI*KLQKCF
Trigger: GAAACATTTCTGGAGCTTCCAGATGTATGGTGAAGA...TTCAAGTGGGCTTTGGCAGAGTTGGGAAACATTTCTGGAGCTTCCAGATGTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505233.5
CDS-3UTR CCA 90 bp AGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACGCTGAGCTTCAGCTGTaGCAGGGGTCCTTTTCAGAT +
Preference number: 4 (lower is better)
Translates to: RGIIELLTDETHLLILCNAELQL*QGSFSD
Trigger: ATCTGAAAAGGACCCCTGCCACAGCTGAAGCTCAGC...GTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CCA 90 bp AATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCGCTGAGCTTCAGCTGTaGCAGGGGTCCTTTTCAGAT +
Preference number: 4 (lower is better)
Translates to: NSTFRGIIELLTDETHLLAELQL*QGSFSD
Trigger: ATCTGAAAAGGACCCCTGCCACAGCTGAAGCTCAGC...GAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR CCA 90 bp GGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTCTGCTGAGCTTCAGCTGTaGCAGGGGTCCTTTTCAGAT +
Preference number: 4 (lower is better)
Translates to: GIIELLTDETHLLILCNSAELQL*QGSFSD
Trigger: ATCTGAAAAGGACCCCTGCCACAGCTGAAGCTCAGC...AGAGTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CCA 90 bp GGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTCTAGCTTTGACCACTCCTaGGTGACAGTGTCCCATTCC +
Preference number: 4 (lower is better)
Translates to: GIIELLTDETHLLILCNSSFDHS*VTVSHS
Trigger: GGAATGGGACACTGTCACCCAGGAGTGGTCAAAGCT...AGAGTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512646.5
CDS-3UTR TCA 90 bp GTCTTCTCTATATTTTCCTCTGTAAGTATCTGGAGTTGGTGCCACATGTACAAAGGGCTCTCACTATTTTaGTGGGATCCGATGCAAAGA +
Preference number: 4 (lower is better)
Translates to: VFSIFSSVSIWSWCHMYKGLSLF*WDPMQR
Trigger: TCTTTGCATCGGATCCCATCAAAATAGTGAGAGCCC...TTTGTACATGTGGCACCAACTCCAGATACTTACAGAGGAAAATATAGAGAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505233.5
CDS-3UTR TCA 90 bp ACTGACAATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATTGCATAAGCACTGGCTaGGTCTGCATGGTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: TDNSTFRGIIELLTDETHCISTG*VCMVFS
Trigger: AGAGAAGACCATGCAGACTCAGCCAGTGCTTATGCA...ATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATTGTCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR TCA 90 bp GGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTCTTGCATAAGCACTGGCTaGGTCTGCATGGTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: GIIELLTDETHLLILCNSCISTG*VCMVFS
Trigger: AGAGAAGACCATGCAGACTCAGCCAGTGCTTATGCA...AGAGTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR TCA 90 bp AATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCCCATCCCAGAGCTGCTaGAGGCTTCTGCAATTTCTT +
Preference number: 4 (lower is better)
Translates to: NSTFRGIIELLTDETHLLPSQSC*RLLQFL
Trigger: AAGAAATTGCAGAAGCCTTCAGCAGCTCTGGGATGG...GAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR TCA 90 bp ATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAATCCCATCCCAGAGCTGCTaGAGGCTTCTGCAATTTCTT +
Preference number: 4 (lower is better)
Translates to: IYSFSVTLDIASCFKMQIPSQSC*RLLQFL
Trigger: AAGAAATTGCAGAAGCCTTCAGCAGCTCTGGGATGG...GATTTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR TCA 90 bp GGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTCTCCATCCCAGAGCTGCTaGAGGCTTCTGCAATTTCTT +
Preference number: 4 (lower is better)
Translates to: GIIELLTDETHLLILCNSPSQSC*RLLQFL
Trigger: AAGAAATTGCAGAAGCCTTCAGCAGCTCTGGGATGG...AGAGTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR TCA 90 bp ATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAATCGAGGTCCATCGGCACTaGGAAGCACTCGTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: IYSFSVTLDIASCFKMQIEVHRH*EALVFL
Trigger: AAGAAAAACGAGTGCTTCTCAGTGCCGATGGACCTC...GATTTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR TCA 90 bp AGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACGAGGTCCATCGGCACTaGGAAGCACTCGTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: RGIIELLTDETHLLILCNEVHRH*EALVFL
Trigger: AAGAAAAACGAGTGCTTCTCAGTGCCGATGGACCTC...GTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR TCA 90 bp GGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTCTGAGGTCCATCGGCACTaGGAAGCACTCGTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: GIIELLTDETHLLILCNSEVHRH*EALVFL
Trigger: AAGAAAAACGAGTGCTTCTCAGTGCCGATGGACCTC...AGAGTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CCA 90 bp ATTATTTGTCCGCCACAACTCTGCATGGATTCAGCAATAAAGGCAGCAATCTTCAACATGTACTGCCTCTaGGCTCTCACTATTTTGATG +
Preference number: 4 (lower is better)
Translates to: IICPPQLCMDSAIKAAIFNMYCL*ALTILM
Trigger: CATCAAAATAGTGAGAGCCCAGAGGCAGTACATGTT...GAAGATTGCTGCCTTTATTGCTGAATCCATGCAGAGTTGTGGCGGACAAATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505233.5
CDS-3UTR CCA 90 bp TATTTGTCCGCCACAACTCTGCATGGATTCAGCAATAAAGGCAGCAATCTTCCTGTAAGTATCTGGAGTTaGTGCCACATGTACAAATTC +
Preference number: 4 (lower is better)
Translates to: YLSATTLHGFSNKGSNLPVSIWS*CHMYKF
Trigger: GAATTTGTACATGTGGCACCAACTCCAGATACTTAC...AGGAAGATTGCTGCCTTTATTGCTGAATCCATGCAGAGTTGTGGCGGACAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505233.5
CDS-3UTR CCA 90 bp AATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCCTGGAAGTAGCCTGCTaGAGGAATTATTTGTCCGCC +
Preference number: 4 (lower is better)
Translates to: NSTFRGIIELLTDETHLLLEVAC*RNYLSA
Trigger: GGCGGACAAATAATTCCTCCAGCAGGCTACTTCCAG...GAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR CCA 90 bp ACTGACAATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATTGCTGGGATTTTCTTTaGAGTCAGTGGTGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: TDNSTFRGIIELLTDETHCWDFL*SQWCCP
Trigger: GGGACAGCACCACTGACTCCAAAGAAAATCCCAGCA...ATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATTGTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR CCA 90 bp ATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAATCTGCTGGGATTTTCTTTaGAGTCAGTGGTGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: IYSFSVTLDIASCFKMQICWDFL*SQWCCP
Trigger: GGGACAGCACCACTGACTCCAAAGAAAATCCCAGCA...GATTTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CCA 90 bp AGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTGCTGGGATTTTCTTTaGAGTCAGTGGTGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: RGIIELLTDETHLLILCNCWDFL*SQWCCP
Trigger: GGGACAGCACCACTGACTCCAAAGAAAATCCCAGCA...GTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR TCA 90 bp ACTGACAATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATGGGCTCTCACTATTTTaGTGGGATCCGATGCAAAGA +
Preference number: 4 (lower is better)
Translates to: TDNSTFRGIIELLTDETHGLSLF*WDPMQR
Trigger: TCTTTGCATCGGATCCCATCAAAATAGTGAGAGCCC...ATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATTGTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR TCA 90 bp ATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAATCGGGCTCTCACTATTTTaGTGGGATCCGATGCAAAGA +
Preference number: 4 (lower is better)
Translates to: IYSFSVTLDIASCFKMQIGLSLF*WDPMQR
Trigger: TCTTTGCATCGGATCCCATCAAAATAGTGAGAGCCC...GATTTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR TCA 90 bp ATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAATCCCTCTTACTGAGCAGTaGATGTGTATCCGTGCACAT +
Preference number: 4 (lower is better)
Translates to: IYSFSVTLDIASCFKMQIPLTEQ*MCIRAH
Trigger: ATGTGCACGGATACACATTCACTGCTCAGTAAGAGG...GATTTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR TCA 90 bp AGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACCCTCTTACTGAGCAGTaGATGTGTATCCGTGCACAT +
Preference number: 4 (lower is better)
Translates to: RGIIELLTDETHLLILCNPLTEQ*MCIRAH
Trigger: ATGTGCACGGATACACATTCACTGCTCAGTAAGAGG...GTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR GCA 90 bp CACATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAATGCAAAGAAAACTTTaGATGAGGGCCCGATGTGCT +
Preference number: 4 (lower is better)
Translates to: HIYSFSVTLDIASCFKMQMQRKL*MRARCA
Trigger: AGCACATCGGGCCCTCATGCAAAGTTTTCTTTGCAT...TTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR GCA 90 bp CACATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAATGTCCGCCACAACTCTaGATGGATTCAGCAATAAAG +
Preference number: 4 (lower is better)
Translates to: HIYSFSVTLDIASCFKMQCPPQL*MDSAIK
Trigger: CTTTATTGCTGAATCCATGCAGAGTTGTGGCGGACA...TTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR GCA 90 bp GTCTTCTCTATATTTTCCTCTGTAAGTATCTGGAGTTGGTGCCACATGTACAAAACCGTGTACATATTCTaGCACTTTCTGGAAGTAGCC +
Preference number: 4 (lower is better)
Translates to: VFSIFSSVSIWSWCHMYKTVYIF*HFLEVA
Trigger: GGCTACTTCCAGAAAGTGGCAGAATATGTACACGGT...TTTGTACATGTGGCACCAACTCCAGATACTTACAGAGGAAAATATAGAGAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505233.5
CDS-3UTR CCA 90 bp GGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTCTGCTTTGACCACTCCATaGGCAACATTGTTGATGCAG +
Preference number: 4 (lower is better)
Translates to: GIIELLTDETHLLILCNSALTTP*ATLLMQ
Trigger: CTGCATCAACAATGTTGCCCATGGAGTGGTCAAAGC...AGAGTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411864.6
CDS-3UTR TCA 90 bp ACTGACAATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATCATGGGCAACATTGTTaGTGCAGTCCAAGTACTGTT +
Preference number: 4 (lower is better)
Translates to: TDNSTFRGIIELLTDETHHGQHC*CSPSTV
Trigger: AACAGTACTTGGACTGCATCAACAATGTTGCCCATG...ATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATTGTCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR TCA 90 bp AATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCCATGGGCAACATTGTTaGTGCAGTCCAAGTACTGTT +
Preference number: 4 (lower is better)
Translates to: NSTFRGIIELLTDETHLLHGQHC*CSPSTV
Trigger: AACAGTACTTGGACTGCATCAACAATGTTGCCCATG...GAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR TCA 90 bp TCTTCACTTCATCTGCATAAGCACTGGCTGAGTCTGCATGGTCTTCTCTATATTTTCCTTCCACTGTTATaGGCATCTTCAATGATTTTC +
Preference number: 4 (lower is better)
Translates to: SSLHLHKHWLSLHGLLYIFLPLL*ASSMIF
Trigger: GAAAATCATTGAAGATGCTCATAACAGTGGAAGGAA...AATATAGAGAAGACCATGCAGACTCAGCCAGTGCTTATGCAGATGAAGTGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505233.5
CDS-3UTR TCA 90 bp AATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCCTGCCAAAGCCCACTTaGACTTCATCAGCTATAAAC +
Preference number: 4 (lower is better)
Translates to: NSTFRGIIELLTDETHLLLPKPT*TSSAIN
Trigger: GTTTATAGCTGATGAAGTTCAAGTGGGCTTTGGCAG...GAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR TCA 90 bp AGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACCTGCCAAAGCCCACTTaGACTTCATCAGCTATAAAC +
Preference number: 4 (lower is better)
Translates to: RGIIELLTDETHLLILCNLPKPT*TSSAIN
Trigger: GTTTATAGCTGATGAAGTTCAAGTGGGCTTTGGCAG...GTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR TCA 90 bp AGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTCGGTTTTCCCATTGTaGCGATGTCTGGAACAAAGT +
Preference number: 4 (lower is better)
Translates to: RGIIELLTDETHLLILCNSVFPL*RCLEQS
Trigger: ACTTTGTTCCAGACATCGTCACAATGGGAAAACCGA...GTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR TCA 90 bp ACTGACAATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATTCGGTTTTCCCATTGTaGCGATGTCTGGAACAAAGT +
Preference number: 4 (lower is better)
Translates to: TDNSTFRGIIELLTDETHSVFPL*RCLEQS
Trigger: ACTTTGTTCCAGACATCGTCACAATGGGAAAACCGA...ATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATTGTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR TCA 90 bp ATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAATCTCGGTTTTCCCATTGTaGCGATGTCTGGAACAAAGT +
Preference number: 4 (lower is better)
Translates to: IYSFSVTLDIASCFKMQISVFPL*RCLEQS
Trigger: ACTTTGTTCCAGACATCGTCACAATGGGAAAACCGA...GATTTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR TCA 90 bp AGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACCTTTCATCTTGTAGATaGTGTGCTGAGCTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: RGIIELLTDETHLLILCNLSSCR*CAELQL
Trigger: CAGCTGAAGCTCAGCACATCATCTACAAGATGAAAG...GTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR TCA 90 bp ACTGACAATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATCTTTCATCTTGTAGATaGTGTGCTGAGCTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: TDNSTFRGIIELLTDETHLSSCR*CAELQL
Trigger: CAGCTGAAGCTCAGCACATCATCTACAAGATGAAAG...ATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATTGTCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR TCA 90 bp ATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAATCCTTTCATCTTGTAGATaGTGTGCTGAGCTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: IYSFSVTLDIASCFKMQILSSCR*CAELQL
Trigger: CAGCTGAAGCTCAGCACATCATCTACAAGATGAAAG...GATTTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR GCA 90 bp ACTGACAATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATATGCAAAGAAAACTTTaGATGAGGGCCCGATGTGCT +
Preference number: 4 (lower is better)
Translates to: TDNSTFRGIIELLTDETHMQRKL*MRARCA
Trigger: AGCACATCGGGCCCTCATGCAAAGTTTTCTTTGCAT...ATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATTGTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR GCA 90 bp GTCTTCTCTATATTTTCCTCTGTAAGTATCTGGAGTTGGTGCCACATGTACAAATCATCAAACATGTACTaGCTCTGGGCTCTCACTATT +
Preference number: 4 (lower is better)
Translates to: VFSIFSSVSIWSWCHMYKSSNMY*LWALTI
Trigger: AATAGTGAGAGCCCAGAGGCAGTACATGTTTGATGA...TTTGTACATGTGGCACCAACTCCAGATACTTACAGAGGAAAATATAGAGAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505233.5
CDS-3UTR GCA 90 bp AATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCTGTCCGCCACAACTCTaGATGGATTCAGCAATAAAG +
Preference number: 4 (lower is better)
Translates to: NSTFRGIIELLTDETHLLCPPQL*MDSAIK
Trigger: CTTTATTGCTGAATCCATGCAGAGTTGTGGCGGACA...GAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR GCA 90 bp GGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTCTTGTCCGCCACAACTCTaGATGGATTCAGCAATAAAG +
Preference number: 4 (lower is better)
Translates to: GIIELLTDETHLLILCNSCPPQL*MDSAIK
Trigger: CTTTATTGCTGAATCCATGCAGAGTTGTGGCGGACA...AGAGTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR GCA 90 bp CACATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAATTTCTGGAAGTAGCCTaGTGGAGGAATTATTTGTCC +
Preference number: 4 (lower is better)
Translates to: HIYSFSVTLDIASCFKMQFLEVA*WRNYLS
Trigger: GGACAAATAATTCCTCCAGCAGGCTACTTCCAGAAA...TTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR GCA 90 bp AGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACACCGTGTACATATTCTaGCACTTTCTGGAAGTAGCC +
Preference number: 4 (lower is better)
Translates to: RGIIELLTDETHLLILCNTVYIF*HFLEVA
Trigger: GGCTACTTCCAGAAAGTGGCAGAATATGTACACGGT...GTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR GCA 90 bp AATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCACCGTGTACATATTCTaGCACTTTCTGGAAGTAGCC +
Preference number: 4 (lower is better)
Translates to: NSTFRGIIELLTDETHLLTVYIF*HFLEVA
Trigger: GGCTACTTCCAGAAAGTGGCAGAATATGTACACGGT...GAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR GCA 90 bp ATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAATCACCGTGTACATATTCTaGCACTTTCTGGAAGTAGCC +
Preference number: 4 (lower is better)
Translates to: IYSFSVTLDIASCFKMQITVYIF*HFLEVA
Trigger: GGCTACTTCCAGAAAGTGGCAGAATATGTACACGGT...GATTTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR GCA 90 bp GGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTCTTATAAACACACCCCCTaGACCGTGTACATATTCTGC +
Preference number: 4 (lower is better)
Translates to: GIIELLTDETHLLILCNSYKHTP*TVYIFC
Trigger: GCAGAATATGTACACGGTGCAGGGGGTGTGTTTATA...AGAGTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR GCA 90 bp ACTGACAATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATTATAAACACACCCCCTaGACCGTGTACATATTCTGC +
Preference number: 4 (lower is better)
Translates to: TDNSTFRGIIELLTDETHYKHTP*TVYIFC
Trigger: GCAGAATATGTACACGGTGCAGGGGGTGTGTTTATA...ATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATTGTCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR GCA 90 bp ATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAATCTATAAACACACCCCCTaGACCGTGTACATATTCTGC +
Preference number: 4 (lower is better)
Translates to: IYSFSVTLDIASCFKMQIYKHTP*TVYIFC
Trigger: GCAGAATATGTACACGGTGCAGGGGGTGTGTTTATA...GATTTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CCA 90 bp ACTGACAATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATGTAAGGCTAAGTCGTTaGCTTCGGATCCTGAATTTG +
Preference number: 4 (lower is better)
Translates to: TDNSTFRGIIELLTDETHVRLSR*LRILNL
Trigger: CAAATTCAGGATCCGAAGCCAACGACTTAGCCTTAC...ATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATTGTCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR CCA 90 bp GGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTCTGTAAGGCTAAGTCGTTaGCTTCGGATCCTGAATTTG +
Preference number: 4 (lower is better)
Translates to: GIIELLTDETHLLILCNSVRLSR*LRILNL
Trigger: CAAATTCAGGATCCGAAGCCAACGACTTAGCCTTAC...AGAGTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CCA 90 bp ACTGACAATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATTCCTCTGTAAGTATCTaGAGTTGGTGCCACATGTAC +
Preference number: 4 (lower is better)
Translates to: TDNSTFRGIIELLTDETHSSVSI*SWCHMY
Trigger: GTACATGTGGCACCAACTCCAGATACTTACAGAGGA...ATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATTGTCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR CCA 90 bp GGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTCTTCCTCTGTAAGTATCTaGAGTTGGTGCCACATGTAC +
Preference number: 4 (lower is better)
Translates to: GIIELLTDETHLLILCNSSSVSI*SWCHMY
Trigger: GTACATGTGGCACCAACTCCAGATACTTACAGAGGA...AGAGTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACC
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CCA 90 bp AGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTCCTCTGTAAGTATCTaGAGTTGGTGCCACATGTAC +
Preference number: 4 (lower is better)
Translates to: RGIIELLTDETHLLILCNSSVSI*SWCHMY
Trigger: GTACATGTGGCACCAACTCCAGATACTTACAGAGGA...GTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CCA 90 bp GTCTTCTCTATATTTTCCTCTGTAAGTATCTGGAGTTGGTGCCACATGTACAAACTGGCTGAGTCTGCATaGTCTTCTCTATATTTTCCT +
Preference number: 4 (lower is better)
Translates to: VFSIFSSVSIWSWCHMYKLAESA*SSLYFP
Trigger: AGGAAAATATAGAGAAGACCATGCAGACTCAGCCAG...TTTGTACATGTGGCACCAACTCCAGATACTTACAGAGGAAAATATAGAGAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505233.5
CDS-3UTR TCA 90 bp GGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTCTTTAAGTACATTTCTATaGGGTCCATCGGCACTGAGA +
Preference number: 4 (lower is better)
Translates to: GIIELLTDETHLLILCNSLSTFL*GPSALR
Trigger: TCTCAGTGCCGATGGACCTCATAGAAATGTACTTAA...AGAGTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR TCA 90 bp AATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCTTAAGTACATTTCTATaGGGTCCATCGGCACTGAGA +
Preference number: 4 (lower is better)
Translates to: NSTFRGIIELLTDETHLLLSTFL*GPSALR
Trigger: TCTCAGTGCCGATGGACCTCATAGAAATGTACTTAA...GAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR TCA 90 bp AGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTTAAGTACATTTCTATaGGGTCCATCGGCACTGAGA +
Preference number: 4 (lower is better)
Translates to: RGIIELLTDETHLLILCNLSTFL*GPSALR
Trigger: TCTCAGTGCCGATGGACCTCATAGAAATGTACTTAA...GTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR TCA 90 bp CACATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAAGAGCTATTAACCGATaGGACACATCTACTCATTCT +
Preference number: 4 (lower is better)
Translates to: HIYSFSVTLDIASCFKMQRAINR*DTSTHS
Trigger: AGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCT...TTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR GCA 90 bp GGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTCTTCATCAAACATGTACTaGCTCTGGGCTCTCACTATT +
Preference number: 4 (lower is better)
Translates to: GIIELLTDETHLLILCNSSSNMY*LWALTI
Trigger: AATAGTGAGAGCCCAGAGGCAGTACATGTTTGATGA...AGAGTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR GCA 90 bp ACTGACAATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATTCATCAAACATGTACTaGCTCTGGGCTCTCACTATT +
Preference number: 4 (lower is better)
Translates to: TDNSTFRGIIELLTDETHSSNMY*LWALTI
Trigger: AATAGTGAGAGCCCAGAGGCAGTACATGTTTGATGA...ATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATTGTCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR GCA 90 bp AATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCTTTCTGGAAGTAGCCTaGTGGAGGAATTATTTGTCC +
Preference number: 4 (lower is better)
Translates to: NSTFRGIIELLTDETHLLFLEVA*WRNYLS
Trigger: GGACAAATAATTCCTCCAGCAGGCTACTTCCAGAAA...GAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR GCA 90 bp ATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAATCTTTCTGGAAGTAGCCTaGTGGAGGAATTATTTGTCC +
Preference number: 4 (lower is better)
Translates to: IYSFSVTLDIASCFKMQIFLEVA*WRNYLS
Trigger: GGACAAATAATTCCTCCAGCAGGCTACTTCCAGAAA...GATTTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR GCA 90 bp ATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAATCAATGTTTCCCAACTCTaGCAAAGCCCACTTGAACTT +
Preference number: 4 (lower is better)
Translates to: IYSFSVTLDIASCFKMQINVSQL*QSPLEL
Trigger: AAGTTCAAGTGGGCTTTGGCAGAGTTGGGAAACATT...GATTTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR GCA 90 bp AATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCAATGTTTCCCAACTCTaGCAAAGCCCACTTGAACTT +
Preference number: 4 (lower is better)
Translates to: NSTFRGIIELLTDETHLLNVSQL*QSPLEL
Trigger: AAGTTCAAGTGGGCTTTGGCAGAGTTGGGAAACATT...GAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR GCA 90 bp AGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACAATGTTTCCCAACTCTaGCAAAGCCCACTTGAACTT +
Preference number: 4 (lower is better)
Translates to: RGIIELLTDETHLLILCNNVSQL*QSPLEL
Trigger: AAGTTCAAGTGGGCTTTGGCAGAGTTGGGAAACATT...GTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR GCA 90 bp AATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCGTCCACCATGAACTTTaGATCTTCTTCAGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: NSTFRGIIELLTDETHLLVHHEL*IFFSEA
Trigger: TGCTTCACTGAAGAAGATGCAAAGTTCATGGTGGAC...GAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR GCA 90 bp ATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAATCGTCCACCATGAACTTTaGATCTTCTTCAGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: IYSFSVTLDIASCFKMQIVHHEL*IFFSEA
Trigger: TGCTTCACTGAAGAAGATGCAAAGTTCATGGTGGAC...GATTTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR GCA 90 bp GGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTCTGTCCACCATGAACTTTaGATCTTCTTCAGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: GIIELLTDETHLLILCNSVHHEL*IFFSEA
Trigger: TGCTTCACTGAAGAAGATGCAAAGTTCATGGTGGAC...AGAGTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CCA 90 bp ACTGACAATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATAACATGTACTGCCTCTaGGCTCTCACTATTTTGATG +
Preference number: 4 (lower is better)
Translates to: TDNSTFRGIIELLTDETHNMYCL*ALTILM
Trigger: CATCAAAATAGTGAGAGCCCAGAGGCAGTACATGTT...ATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATTGTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR CCA 90 bp AATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCAACATGTACTGCCTCTaGGCTCTCACTATTTTGATG +
Preference number: 4 (lower is better)
Translates to: NSTFRGIIELLTDETHLLNMYCL*ALTILM
Trigger: CATCAAAATAGTGAGAGCCCAGAGGCAGTACATGTT...GAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR CCA 90 bp CACATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAATTGCTGAAAGGCGTTTaGCATACTCAACAATGTTGT +
Preference number: 4 (lower is better)
Translates to: HIYSFSVTLDIASCFKMQLLKGV*HTQQCC
Trigger: ACAACATTGTTGAGTATGCCAAACGCCTTTCAGCAA...TTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CCA 90 bp AGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACCTGGCTGAGTCTGCATaGTCTTCTCTATATTTTCCT +
Preference number: 4 (lower is better)
Translates to: RGIIELLTDETHLLILCNLAESA*SSLYFP
Trigger: AGGAAAATATAGAGAAGACCATGCAGACTCAGCCAG...GTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CCA 90 bp GGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTCTCTGGCTGAGTCTGCATaGTCTTCTCTATATTTTCCT +
Preference number: 4 (lower is better)
Translates to: GIIELLTDETHLLILCNSLAESA*SSLYFP
Trigger: AGGAAAATATAGAGAAGACCATGCAGACTCAGCCAG...AGAGTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CCA 90 bp ATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAATCCTGGCTGAGTCTGCATaGTCTTCTCTATATTTTCCT +
Preference number: 4 (lower is better)
Translates to: IYSFSVTLDIASCFKMQILAESA*SSLYFP
Trigger: AGGAAAATATAGAGAAGACCATGCAGACTCAGCCAG...GATTTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CCA 90 bp CACATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAACTTCTGCAATTTCTTTaGTTGTTACCACACATGCCA +
Preference number: 4 (lower is better)
Translates to: HIYSFSVTLDIASCFKMQLLQFL*LLPHMP
Trigger: TGGCATGTGTGGTAACAACCAAAGAAATTGCAGAAG...TTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CCA 90 bp CACATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAACTAAGCAGTTCTATGTaGGCTTCTTTCAGCATCTTT +
Preference number: 4 (lower is better)
Translates to: HIYSFSVTLDIASCFKMQLSSSM*ASFSIF
Trigger: AAAGATGCTGAAAGAAGCCCACATAGAACTGCTTAG...TTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR TCA 90 bp CACATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAGTTGGCTTCGGATCCTaGATTTGTAAAATAACAAAC +
Preference number: 4 (lower is better)
Translates to: HIYSFSVTLDIASCFKMQVGFGS*ICKITN
Trigger: GTTTGTTATTTTACAAATTCAGGATCCGAAGCCAAC...TTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGATGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR TCA 90 bp CACATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAATTTTCAGTAACTCAGTaGGATAATTCCCTACTCTCT +
Preference number: 4 (lower is better)
Translates to: HIYSFSVTLDIASCFKMQFSVTQ*DNSLLS
Trigger: AGAGAGTAGGGAATTATCTCACTGAGTTACTGAAAA...TTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGATGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR TCA 90 bp GGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTCTAGAGCTATTAACCGATaGGACACATCTACTCATTCT +
Preference number: 4 (lower is better)
Translates to: GIIELLTDETHLLILCNSRAINR*DTSTHS
Trigger: AGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCT...AGAGTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACC
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR TCA 90 bp ATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAATCAGAGCTATTAACCGATaGGACACATCTACTCATTCT +
Preference number: 4 (lower is better)
Translates to: IYSFSVTLDIASCFKMQIRAINR*DTSTHS
Trigger: AGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCT...GATTTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR GCA 90 bp ACTGACAATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATGTGAATGTGTATCCGTaGACATTCCATTTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: TDNSTFRGIIELLTDETHVNVYP*TFHFSF
Trigger: GAAAGAGAAATGGAATGTGCACGGATACACATTCAC...ATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATTGTCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR GCA 90 bp ATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAATCGTGAATGTGTATCCGTaGACATTCCATTTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: IYSFSVTLDIASCFKMQIVNVYP*TFHFSF
Trigger: GAAAGAGAAATGGAATGTGCACGGATACACATTCAC...GATTTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR GCA 90 bp GGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTCTGTGAATGTGTATCCGTaGACATTCCATTTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: GIIELLTDETHLLILCNSVNVYP*TFHFSF
Trigger: GAAAGAGAAATGGAATGTGCACGGATACACATTCAC...AGAGTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CCA 90 bp AATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCTTGCTGAAAGGCGTTTaGCATACTCAACAATGTTGT +
Preference number: 4 (lower is better)
Translates to: NSTFRGIIELLTDETHLLLLKGV*HTQQCC
Trigger: ACAACATTGTTGAGTATGCCAAACGCCTTTCAGCAA...GAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR CCA 90 bp GGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTCTGTAAGTATCTGGAGTTaGTGCCACATGTACAAATTC +
Preference number: 4 (lower is better)
Translates to: GIIELLTDETHLLILCNSVSIWS*CHMYKF
Trigger: GAATTTGTACATGTGGCACCAACTCCAGATACTTAC...AGAGTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CCA 90 bp ATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAATCGTAAGTATCTGGAGTTaGTGCCACATGTACAAATTC +
Preference number: 4 (lower is better)
Translates to: IYSFSVTLDIASCFKMQIVSIWS*CHMYKF
Trigger: GAATTTGTACATGTGGCACCAACTCCAGATACTTAC...GATTTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CCA 90 bp ACTGACAATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATTCTTCACCATACATCTaGAAGCTCCAGAAATGTTTC +
Preference number: 4 (lower is better)
Translates to: TDNSTFRGIIELLTDETHSSPYI*KLQKCF
Trigger: GAAACATTTCTGGAGCTTCCAGATGTATGGTGAAGA...ATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATTGTCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR CCA 90 bp GGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTCTTCTTCACCATACATCTaGAAGCTCCAGAAATGTTTC +
Preference number: 4 (lower is better)
Translates to: GIIELLTDETHLLILCNSSSPYI*KLQKCF
Trigger: GAAACATTTCTGGAGCTTCCAGATGTATGGTGAAGA...AGAGTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CCA 90 bp ACTGACAATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATCATTGTGACGATGTCTaGAACAAAGTCTTCACCATA +
Preference number: 4 (lower is better)
Translates to: TDNSTFRGIIELLTDETHHCDDV*NKVFTI
Trigger: TATGGTGAAGACTTTGTTCCAGACATCGTCACAATG...ATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATTGTCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR CCA 90 bp ATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAATCCATTGTGACGATGTCTaGAACAAAGTCTTCACCATA +
Preference number: 4 (lower is better)
Translates to: IYSFSVTLDIASCFKMQIHCDDV*NKVFTI
Trigger: TATGGTGAAGACTTTGTTCCAGACATCGTCACAATG...GATTTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CCA 90 bp ATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAATCCTTCTGCAATTTCTTTaGTTGTTACCACACATGCCA +
Preference number: 4 (lower is better)
Translates to: IYSFSVTLDIASCFKMQILLQFL*LLPHMP
Trigger: TGGCATGTGTGGTAACAACCAAAGAAATTGCAGAAG...GATTTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CCA 90 bp AATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCAGAATCCTATCAAGTTaGTCCACCATGAACTTTGCA +
Preference number: 4 (lower is better)
Translates to: NSTFRGIIELLTDETHLLRILSS*STMNFA
Trigger: TGCAAAGTTCATGGTGGACCAACTTGATAGGATTCT...GAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR CCA 90 bp AGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACAGAATCCTATCAAGTTaGTCCACCATGAACTTTGCA +
Preference number: 4 (lower is better)
Translates to: RGIIELLTDETHLLILCNRILSS*STMNFA
Trigger: TGCAAAGTTCATGGTGGACCAACTTGATAGGATTCT...GTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CCA 90 bp ATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAATCAGAATCCTATCAAGTTaGTCCACCATGAACTTTGCA +
Preference number: 4 (lower is better)
Translates to: IYSFSVTLDIASCFKMQIRILSS*STMNFA
Trigger: TGCAAAGTTCATGGTGGACCAACTTGATAGGATTCT...GATTTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CCA 90 bp ACTGACAATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATCTAAGCAGTTCTATGTaGGCTTCTTTCAGCATCTTT +
Preference number: 4 (lower is better)
Translates to: TDNSTFRGIIELLTDETHLSSSM*ASFSIF
Trigger: AAAGATGCTGAAAGAAGCCCACATAGAACTGCTTAG...ATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATTGTCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR CCA 90 bp AATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCCTAAGCAGTTCTATGTaGGCTTCTTTCAGCATCTTT +
Preference number: 4 (lower is better)
Translates to: NSTFRGIIELLTDETHLLLSSSM*ASFSIF
Trigger: AAAGATGCTGAAAGAAGCCCACATAGAACTGCTTAG...GAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR TCA 90 bp AATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCGTTGGCTTCGGATCCTaGATTTGTAAAATAACAAAC +
Preference number: 4 (lower is better)
Translates to: NSTFRGIIELLTDETHLLVGFGS*ICKITN
Trigger: GTTTGTTATTTTACAAATTCAGGATCCGAAGCCAAC...GAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR TCA 90 bp AGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACGTTGGCTTCGGATCCTaGATTTGTAAAATAACAAAC +
Preference number: 4 (lower is better)
Translates to: RGIIELLTDETHLLILCNVGFGS*ICKITN
Trigger: GTTTGTTATTTTACAAATTCAGGATCCGAAGCCAAC...GTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR TCA 90 bp AGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTTCCTTCCACTGTTATaGGCATCTTCAATGATTTTC +
Preference number: 4 (lower is better)
Translates to: RGIIELLTDETHLLILCNFLPLL*ASSMIF
Trigger: GAAAATCATTGAAGATGCTCATAACAGTGGAAGGAA...GTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR TCA 90 bp AATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCTTCCTTCCACTGTTATaGGCATCTTCAATGATTTTC +
Preference number: 4 (lower is better)
Translates to: NSTFRGIIELLTDETHLLFLPLL*ASSMIF
Trigger: GAAAATCATTGAAGATGCTCATAACAGTGGAAGGAA...GAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR TCA 90 bp AGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTTTTCAGTAACTCAGTaGGATAATTCCCTACTCTCT +
Preference number: 4 (lower is better)
Translates to: RGIIELLTDETHLLILCNFSVTQ*DNSLLS
Trigger: AGAGAGTAGGGAATTATCTCACTGAGTTACTGAAAA...GTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR GCA 90 bp AGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACCTGGACATCGCATCTTaGTTTAAAATGCAAATCAGT +
Preference number: 4 (lower is better)
Translates to: RGIIELLTDETHLLILCNLDIAS*FKMQIS
Trigger: ACTGATTTGCATTTTAAAGCAAGATGCGATGTCCAG...GTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR GCA 90 bp ACTGACAATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATCTGGACATCGCATCTTaGTTTAAAATGCAAATCAGT +
Preference number: 4 (lower is better)
Translates to: TDNSTFRGIIELLTDETHLDIAS*FKMQIS
Trigger: ACTGATTTGCATTTTAAAGCAAGATGCGATGTCCAG...ATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATTGTCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR GCA 90 bp ATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAATCCTGGACATCGCATCTTaGTTTAAAATGCAAATCAGT +
Preference number: 4 (lower is better)
Translates to: IYSFSVTLDIASCFKMQILDIAS*FKMQIS
Trigger: ACTGATTTGCATTTTAAAGCAAGATGCGATGTCCAG...GATTTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CCA 90 bp AGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTCAACAATGTTGTCGTaGAGGAATCGAGAATTTGTA +
Preference number: 4 (lower is better)
Translates to: RGIIELLTDETHLLILCNSTMLS*RNREFV
Trigger: TACAAATTCTCGATTCCTCCACGACAACATTGTTGA...GTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CCA 90 bp AATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCTCAACAATGTTGTCGTaGAGGAATCGAGAATTTGTA +
Preference number: 4 (lower is better)
Translates to: NSTFRGIIELLTDETHLLSTMLS*RNREFV
Trigger: TACAAATTCTCGATTCCTCCACGACAACATTGTTGA...GAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR CCA 90 bp GGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTCTTCAACAATGTTGTCGTaGAGGAATCGAGAATTTGTA +
Preference number: 4 (lower is better)
Translates to: GIIELLTDETHLLILCNSSTMLS*RNREFV
Trigger: TACAAATTCTCGATTCCTCCACGACAACATTGTTGA...AGAGTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CCA 90 bp AATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCAACAGCACAAGATACTaGATTTCCTCCATACGTATT +
Preference number: 4 (lower is better)
Translates to: NSTFRGIIELLTDETHLLNSTRY*ISSIRI
Trigger: AATACGTATGGAGGAAATCCAGTATCTTGTGCTGTT...GAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR CCA 90 bp GGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTCTAACAGCACAAGATACTaGATTTCCTCCATACGTATT +
Preference number: 4 (lower is better)
Translates to: GIIELLTDETHLLILCNSNSTRY*ISSIRI
Trigger: AATACGTATGGAGGAAATCCAGTATCTTGTGCTGTT...AGAGTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CCA 90 bp ATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAATCAACAGCACAAGATACTaGATTTCCTCCATACGTATT +
Preference number: 4 (lower is better)
Translates to: IYSFSVTLDIASCFKMQINSTRY*ISSIRI
Trigger: AATACGTATGGAGGAAATCCAGTATCTTGTGCTGTT...GATTTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS GCA 90 bp TGGTGGCGGGGTGCAGGGCGCTGCGAAGGTGCAAGGTGCAAGGTCTaGGCGCCTCCTACGCGAGCCTGGGACTGCCTTGGCGGCCCCGGC +
Preference number: 5 (lower is better)
Translates to: WWRGAGRCEGARCKV*APPTRAWDCLGGPG
Trigger: GCCGGGGCCGCCAAGGCAGTCCCAGGCTCGCGTAGGAGGCGCGCAGACCTTGCACCTTGCACCTTCGCAGCGCCCTGCACCCCGCCACCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000509402.1
ENST00000510706.5
CDS GCA 90 bp GGTGCAAGGTGCAAGGTCTGCGCGCCTCCTACGCGAGCCTGGGACTaGCTTGGCGGCCCCGGCCGGCCTTCCTCCCGTTATCCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: GARCKVCAPPTRAWD*LGGPGRPSSRYPSW
Trigger: CCAGGAGGGATAACGGGAGGAAGGCCGGCCGGGGCCGCCAAGGCAGTCCCAGGCTCGCGTAGGAGGCGCGCAGACCTTGCACCTTGCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000509402.1
ENST00000510706.5
CDS GCA 90 bp GCTCGCACATGGTGGCGGGGTGCAGGGCGCTGCGAAGGTGCAAGGTaGAAGGTCTGCGCGCCTCCTACGCGAGCCTGGGACTGCCTTGGC +
Preference number: 5 (lower is better)
Translates to: ARTWWRGAGRCEGAR*KVCAPPTRAWDCLG
Trigger: GCCAAGGCAGTCCCAGGCTCGCGTAGGAGGCGCGCAGACCTTGCACCTTGCACCTTCGCAGCGCCCTGCACCCCGCCACCATGTGCGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000509402.1
ENST00000510706.5
CDS GCA 90 bp CCCGCTTACTGTACAGCTCGCACATGGTGGCGGGGTGCAGGGCGCTaGGAAGGTGCAAGGTGCAAGGTCTGCGCGCCTCCTACGCGAGCC +
Preference number: 5 (lower is better)
Translates to: PAYCTARTWWRGAGR*EGARCKVCAPPTRA
Trigger: GGCTCGCGTAGGAGGCGCGCAGACCTTGCACCTTGCACCTTCGCAGCGCCCTGCACCCCGCCACCATGTGCGAGCTGTACAGTAAGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000509402.1
ENST00000510706.5
ENST00000512646.5
CDS GCA 90 bp CCCAGAGTGTCCCGCTTACTGTACAGCTCGCACATGGTGGCGGGGTaGAGGGCGCTGCGAAGGTGCAAGGTGCAAGGTCTGCGCGCCTCC +
Preference number: 5 (lower is better)
Translates to: PRVSRLLYSSHMVAG*RALRRCKVQGLRAS
Trigger: GGAGGCGCGCAGACCTTGCACCTTGCACCTTCGCAGCGCCCTGCACCCCGCCACCATGTGCGAGCTGTACAGTAAGCGGGACACTCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000509402.1
ENST00000510706.5
ENST00000512646.5
CDS CCA 90 bp TCCTCAGCCCCAGAGTGTCCCGCTTACTGTACAGCTCGCACATGGTaGCGGGGTGCAGGGCGCTGCGAAGGTGCAAGGTGCAAGGTCTGC +
Preference number: 5 (lower is better)
Translates to: SSAPECPAYCTARTW*RGAGRCEGARCKVC
Trigger: GCAGACCTTGCACCTTGCACCTTCGCAGCGCCCTGCACCCCGCCACCATGTGCGAGCTGTACAGTAAGCGGGACACTCTGGGGCTGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000509402.1
ENST00000510706.5
ENST00000512646.5
CDS CCA 90 bp TCTTCCTCAGCCCCAGAGTGTCCCGCTTACTGTACAGCTCGCACATaGTGGCGGGGTGCAGGGCGCTGCGAAGGTGCAAGGTGCAAGGTC +
Preference number: 5 (lower is better)
Translates to: SSSAPECPAYCTART*WRGAGRCEGARCKV
Trigger: GACCTTGCACCTTGCACCTTCGCAGCGCCCTGCACCCCGCCACCATGTGCGAGCTGTACAGTAAGCGGGACACTCTGGGGCTGAGGAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000509402.1
ENST00000510706.5
ENST00000512646.5
CDS-3UTR CAA 90 bp AACTGCCGAGCCAGGCGTAAGGCTAAGTCGTTGGCTTCGGATCCTGAATTTGTAGAGCCTGGGACTGCCTaGGCGGCCCCGGCCGGCCTT +
Preference number: 5 (lower is better)
Translates to: NCRARRKAKSLASDPEFVEPGTA*AAPAGL
Trigger: AAGGCCGGCCGGGGCCGCCAAGGCAGTCCCAGGCTC...TACAAATTCAGGATCCGAAGCCAACGACTTAGCCTTACGCCTGGCTCGGCAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509402.1
CDS GCA 90 bp TGGGTGACAGTGTCCCATTCCGGGCCAGGGTGCCCTTACCCGATGTaGTTCTTCCTCAGCCCCAGAGTGTCCCGCTTACTGTACAGCTCG +
Preference number: 5 (lower is better)
Translates to: WVTVSHSGPGCPYPM*FFLSPRVSRLLYSS
Trigger: CGAGCTGTACAGTAAGCGGGACACTCTGGGGCTGAGGAAGAAGCACATCGGGTAAGGGCACCCTGGCCCGGAATGGGACACTGTCACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512646.5
CDS-3UTR CAA 90 bp AACTGCCGAGCCAGGCGTAAGGCTAAGTCGTTGGCTTCGGATCCTGAATTTGTACCTCCTGGCGTTCTCTaGCCCGGGGCGTCGGAGGTC +
Preference number: 5 (lower is better)
Translates to: NCRARRKAKSLASDPEFVPPGVL*PGASEV
Trigger: GACCTCCGACGCCCCGGGCAAGAGAACGCCAGGAGG...TACAAATTCAGGATCCGAAGCCAACGACTTAGCCTTACGCCTGGCTCGGCAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509402.1
CDS GCA 90 bp AAACTTTGCATGAGGGCTTCCGGGCCAGGGTGCCCTTACCCGATGTaGTTCTTCCTCAGCCCCAGAGTGTCCCGCTTACTGTACAGCTCG +
Preference number: 5 (lower is better)
Translates to: KLCMRASGPGCPYPM*FFLSPRVSRLLYSS
Trigger: CGAGCTGTACAGTAAGCGGGACACTCTGGGGCTGAGGAAGAAGCACATCGGGTAAGGGCACCCTGGCCCGGAAGCCCTCATGCAAAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510706.5
CDS-3UTR CAA 90 bp CACATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAGAGCCTGGGACTGCCTaGGCGGCCCCGGCCGGCCTT +
Preference number: 5 (lower is better)
Translates to: HIYSFSVTLDIASCFKMQEPGTA*AAPAGL
Trigger: AAGGCCGGCCGGGGCCGCCAAGGCAGTCCCAGGCTC...TTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR CAA 90 bp AATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCGAGCCTGGGACTGCCTaGGCGGCCCCGGCCGGCCTT +
Preference number: 5 (lower is better)
Translates to: NSTFRGIIELLTDETHLLEPGTA*AAPAGL
Trigger: AAGGCCGGCCGGGGCCGCCAAGGCAGTCCCAGGCTC...GAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR CAA 90 bp CCCAACTCTGCCAAAGCCCACTTGAACTTCATCAGCTATAAACACACCCCCTGCCGTAAGGCTAAGTCGTaGGCTTCGGATCATGGGCAA +
Preference number: 5 (lower is better)
Translates to: PNSAKAHLNFISYKHTPCRKAKS*ASDHGQ
Trigger: TTGCCCATGATCCGAAGCCAACGACTTAGCCTTACG...GCAGGGGGTGTGTTTATAGCTGATGAAGTTCAAGTGGGCTTTGGCAGAGTTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505233.5
CDS-3UTR CAA 90 bp AGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACCCTCCTGGCGTTCTCTaGCCCGGGGCGTCGGAGGTC +
Preference number: 5 (lower is better)
Translates to: RGIIELLTDETHLLILCNPPGVL*PGASEV
Trigger: GACCTCCGACGCCCCGGGCAAGAGAACGCCAGGAGG...GTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296486.8
CDS-3UTR CAA 90 bp AACTGCCGAGCCAGGCGTAAGGCTAAGTCGTTGGCTTCGGATCCTGAATTTGTACGTAAGGCTAAGTCGTaGGCTTCGGATCCTGAATTT +
Preference number: 5 (lower is better)
Translates to: NCRARRKAKSLASDPEFVRKAKS*ASDPEF
Trigger: AAATTCAGGATCCGAAGCCAACGACTTAGCCTTACG...TACAAATTCAGGATCCGAAGCCAACGACTTAGCCTTACGCCTGGCTCGGCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509402.1
CDS-3UTR CAA 90 bp CCCAACTCTGCCAAAGCCCACTTGAACTTCATCAGCTATAAACACACCCCCTGCTGCTGGAGGAATTATTaGTCCGCCACAACTCTGCAT +
Preference number: 5 (lower is better)
Translates to: PNSAKAHLNFISYKHTPCCWRNY*SATTLH
Trigger: ATGCAGAGTTGTGGCGGACAAATAATTCCTCCAGCA...GCAGGGGGTGTGTTTATAGCTGATGAAGTTCAAGTGGGCTTTGGCAGAGTTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505233.5
CDS TCA 90 bp CACCGTTCTCATCAAACATGTACTGCCTCTGGGCTCTCACTATTTTaGTGGGATCCGATGCAAAGAAAACTTTGCATGAGGGCTTCCGGG +
Preference number: 5 (lower is better)
Translates to: HRSHQTCTASGLSLF*WDPMQRKLCMRASG
Trigger: CCCGGAAGCCCTCATGCAAAGTTTTCTTTGCATCGGATCCCATCAAAATAGTGAGAGCCCAGAGGCAGTACATGTTTGATGAGAACGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510706.5
CDS-3UTR CAA 90 bp TCCGCCACAACTCTGCATGGATTCAGCAATAAAGGCAGCAATCTTCCTTCCACTGATGCAAAGAAAACTTaGCATGAGGGCCCGATGTGC +
Preference number: 5 (lower is better)
Translates to: SATTLHGFSNKGSNLPSTDAKKT*HEGPMC
Trigger: GCACATCGGGCCCTCATGCAAAGTTTTCTTTGCATC...AGTGGAAGGAAGATTGCTGCCTTTATTGCTGAATCCATGCAGAGTTGTGGCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505233.5
CDS-3UTR CAA 90 bp AACTGCCGAGCCAGGCGTAAGGCTAAGTCGTTGGCTTCGGATCCTGAATTTGTAGCATACTCAACAATGTaGTCGTGGAGGAATCGAGAA +
Preference number: 5 (lower is better)
Translates to: NCRARRKAKSLASDPEFVAYSTM*SWRNRE
Trigger: TTCTCGATTCCTCCACGACAACATTGTTGAGTATGC...TACAAATTCAGGATCCGAAGCCAACGACTTAGCCTTACGCCTGGCTCGGCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509402.1
CDS-3UTR CAA 90 bp AACTGCCGAGCCAGGCGTAAGGCTAAGTCGTTGGCTTCGGATCCTGAATTTGTAGTTGCTGAAAGGCGTTaGGCATACTCAACAATGTTG +
Preference number: 5 (lower is better)
Translates to: NCRARRKAKSLASDPEFVVAERR*AYSTML
Trigger: CAACATTGTTGAGTATGCCAAACGCCTTTCAGCAAC...TACAAATTCAGGATCCGAAGCCAACGACTTAGCCTTACGCCTGGCTCGGCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509402.1
CDS-3UTR CAA 90 bp CACATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAGCCACCGGGTGGCCGTaGCCCATCGGTTTTCCCATT +
Preference number: 5 (lower is better)
Translates to: HIYSFSVTLDIASCFKMQATGWP*PIGFPI
Trigger: AATGGGAAAACCGATGGGCAACGGCCACCCGGTGGC...TTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS TCA 90 bp CACCGTTCTCATCAAACATGTACTGCCTCTGGGCTCTCACTATTTTaGTGGGATCCGATGCAAAGAAAACTTTGCATGAGGGCCCGATGT +
Preference number: 5 (lower is better)
Translates to: HRSHQTCTASGLSLF*WDPMQRKLCMRARC
Trigger: ACATCGGGCCCTCATGCAAAGTTTTCTTTGCATCGGATCCCATCAAAATAGTGAGAGCCCAGAGGCAGTACATGTTTGATGAGAACGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000505233.5
CDS-3UTR CAA 90 bp TCCGCCACAACTCTGCATGGATTCAGCAATAAAGGCAGCAATCTTCCTTCCACTTGGGCTCTCACTATTTaGATGGGATCCGATGCAAAG +
Preference number: 5 (lower is better)
Translates to: SATTLHGFSNKGSNLPSTWALTI*MGSDAK
Trigger: CTTTGCATCGGATCCCATCAAAATAGTGAGAGCCCA...AGTGGAAGGAAGATTGCTGCCTTTATTGCTGAATCCATGCAGAGTTGTGGCGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505233.5
CDS-3UTR CAA 90 bp ATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAATCGCCACCGGGTGGCCGTaGCCCATCGGTTTTCCCATT +
Preference number: 5 (lower is better)
Translates to: IYSFSVTLDIASCFKMQIATGWP*PIGFPI
Trigger: AATGGGAAAACCGATGGGCAACGGCCACCCGGTGGC...GATTTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CAA 90 bp AACTGCCGAGCCAGGCGTAAGGCTAAGTCGTTGGCTTCGGATCCTGAATTTGTAGGAGGAATCGAGAATTaGTATTTAGCAGTTCCATCT +
Preference number: 5 (lower is better)
Translates to: NCRARRKAKSLASDPEFVGGIEN*YLAVPS
Trigger: AGATGGAACTGCTAAATACAAATTCTCGATTCCTCC...TACAAATTCAGGATCCGAAGCCAACGACTTAGCCTTACGCCTGGCTCGGCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509402.1
CDS-3UTR CAA 90 bp GCCAAAGCCCACTTGAACTTCATCAGCTATAAACACACCCCCTGCACCGTGTACTGTAAGTATCTGGAGTaGGTGCCACATGTACAAATT +
Preference number: 5 (lower is better)
Translates to: AKAHLNFISYKHTPCTVYCKYLE*VPHVQI
Trigger: AATTTGTACATGTGGCACCAACTCCAGATACTTACA...GTACACGGTGCAGGGGGTGTGTTTATAGCTGATGAAGTTCAAGTGGGCTTTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505233.5
CDS-3UTR CAA 90 bp AACTGCCGAGCCAGGCGTAAGGCTAAGTCGTTGGCTTCGGATCCTGAATTTGTATGTAAGTATCTGGAGTaGGTGCCACATGTACAAATT +
Preference number: 5 (lower is better)
Translates to: NCRARRKAKSLASDPEFVCKYLE*VPHVQI
Trigger: AATTTGTACATGTGGCACCAACTCCAGATACTTACA...TACAAATTCAGGATCCGAAGCCAACGACTTAGCCTTACGCCTGGCTCGGCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509402.1
CDS-3UTR CAA 90 bp TGCTGGAGGAATTATTTGTCCGCCACAACTCTGCATGGATTCAGCAATAAAGGCGGATCATGGGCAACATaGTTGATGCAGTCCAAGTAC +
Preference number: 5 (lower is better)
Translates to: CWRNYLSATTLHGFSNKGGSWAT*LMQSKY
Trigger: GTACTTGGACTGCATCAACAATGTTGCCCATGATCC...GCCTTTATTGCTGAATCCATGCAGAGTTGTGGCGGACAAATAATTCCTCCAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505233.5
CDS CCA 90 bp GGCAGAGTTGCTGAAAGGCGTTTGGCATACTCAACAATGTTGTCGTaGAGGAATCGAGAATTTGTATTTAGCAGTTCCATCTGTTTCAGG +
Preference number: 5 (lower is better)
Translates to: GRVAERRLAYSTMLS*RNREFVFSSSICFR
Trigger: CCTGAAACAGATGGAACTGCTAAATACAAATTCTCGATTCCTCCACGACAACATTGTTGAGTATGCCAAACGCCTTTCAGCAACTCTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000509402.1
ENST00000510706.5
ENST00000510723.1
ENST00000512320.1
ENST00000512646.5
CDS-3UTR CAA 90 bp CATACATCTGGAAGCTCCAGAAATGTTTCCCAACTCTGCCAAAGCCCACTTGAATCTGCCAAAGCCCACTaGAACTTCATCAGCTATAAA +
Preference number: 5 (lower is better)
Translates to: HTSGSSRNVSQLCQSPLESAKAH*NFISYK
Trigger: TTTATAGCTGATGAAGTTCAAGTGGGCTTTGGCAGA...TTCAAGTGGGCTTTGGCAGAGTTGGGAAACATTTCTGGAGCTTCCAGATGTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505233.5
CDS-3UTR CAA 90 bp CACATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAACTGCTGGGATTTTCTTaGGAGTCAGTGGTGCTGTCC +
Preference number: 5 (lower is better)
Translates to: HIYSFSVTLDIASCFKMQLLGFS*ESVVLS
Trigger: GGACAGCACCACTGACTCCAAAGAAAATCCCAGCAG...TTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CAA 90 bp AATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCGTTTCTCCGGCAGAGTaGCTGAAAGGCGTTTGGCAT +
Preference number: 5 (lower is better)
Translates to: NSTFRGIIELLTDETHLLVSPAE*LKGVWH
Trigger: ATGCCAAACGCCTTTCAGCAACTCTGCCGGAGAAAC...GAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR CAA 90 bp GGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTCTGTTTCTCCGGCAGAGTaGCTGAAAGGCGTTTGGCAT +
Preference number: 5 (lower is better)
Translates to: GIIELLTDETHLLILCNSVSPAE*LKGVWH
Trigger: ATGCCAAACGCCTTTCAGCAACTCTGCCGGAGAAAC...AGAGTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CAA 90 bp ATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAATCGTTTCTCCGGCAGAGTaGCTGAAAGGCGTTTGGCAT +
Preference number: 5 (lower is better)
Translates to: IYSFSVTLDIASCFKMQIVSPAE*LKGVWH
Trigger: ATGCCAAACGCCTTTCAGCAACTCTGCCGGAGAAAC...GATTTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CAA 90 bp GGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTCTCTGCTGGGATTTTCTTaGGAGTCAGTGGTGCTGTCC +
Preference number: 5 (lower is better)
Translates to: GIIELLTDETHLLILCNSLLGFS*ESVVLS
Trigger: GGACAGCACCACTGACTCCAAAGAAAATCCCAGCAG...AGAGTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CAA 90 bp AATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCCTGCTGGGATTTTCTTaGGAGTCAGTGGTGCTGTCC +
Preference number: 5 (lower is better)
Translates to: NSTFRGIIELLTDETHLLLLGFS*ESVVLS
Trigger: GGACAGCACCACTGACTCCAAAGAAAATCCCAGCAG...GAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR CAA 90 bp AGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTGTTTCAGGGCAGCTTaGACCACTCCATGGGCAACA +
Preference number: 5 (lower is better)
Translates to: RGIIELLTDETHLLILCNCFRAA*TTPWAT
Trigger: TGTTGCCCATGGAGTGGTCAAAGCTGCCCTGAAACA...GTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411864.6
CDS-3UTR CAA 90 bp TCTTCACTTCATCTGCATAAGCACTGGCTGAGTCTGCATGGTCTTCTCTATATTTCATGGGCAACATTGTaGATGCAGTCCAAGTACTGT +
Preference number: 5 (lower is better)
Translates to: SSLHLHKHWLSLHGLLYISWATL*MQSKYC
Trigger: ACAGTACTTGGACTGCATCAACAATGTTGCCCATGA...AATATAGAGAAGACCATGCAGACTCAGCCAGTGCTTATGCAGATGAAGTGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505233.5
CDS CCA 90 bp AATAACAAACAGAGAGTTTCTCCGGCAGAGTTGCTGAAAGGCGTTTaGCATACTCAACAATGTTGTCGTGGAGGAATCGAGAATTTGTAT +
Preference number: 5 (lower is better)
Translates to: NNKQRVSPAELLKGV*HTQQCCRGGIENLY
Trigger: ATACAAATTCTCGATTCCTCCACGACAACATTGTTGAGTATGCCAAACGCCTTTCAGCAACTCTGCCGGAGAAACTCTCTGTTTGTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000509402.1
ENST00000510706.5
ENST00000510723.1
ENST00000512320.1
ENST00000512646.5
CDS-3UTR CAA 90 bp GGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTCTGATGCAAAGAAAACTTaGCATGAGGGCCCGATGTGC +
Preference number: 5 (lower is better)
Translates to: GIIELLTDETHLLILCNSDAKKT*HEGPMC
Trigger: GCACATCGGGCCCTCATGCAAAGTTTTCTTTGCATC...AGAGTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR CAA 90 bp AGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACGATGCAAAGAAAACTTaGCATGAGGGCCCGATGTGC +
Preference number: 5 (lower is better)
Translates to: RGIIELLTDETHLLILCNDAKKT*HEGPMC
Trigger: GCACATCGGGCCCTCATGCAAAGTTTTCTTTGCATC...GTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR CAA 90 bp CACATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAATGGGCTCTCACTATTTaGATGGGATCCGATGCAAAG +
Preference number: 5 (lower is better)
Translates to: HIYSFSVTLDIASCFKMQWALTI*MGSDAK
Trigger: CTTTGCATCGGATCCCATCAAAATAGTGAGAGCCCA...TTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR CAA 90 bp GGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTCTCCCACATGGGCAACATaGTTGATGCAGTCCAAGTAC +
Preference number: 5 (lower is better)
Translates to: GIIELLTDETHLLILCNSPTWAT*LMQSKY
Trigger: GTACTTGGACTGCATCAACAATGTTGCCCATGTGGG...AGAGTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296486.8
CDS-3UTR CAA 90 bp CACATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAACTGCAATTTCTTTGGTaGTTACCACACATGCCACCG +
Preference number: 5 (lower is better)
Translates to: HIYSFSVTLDIASCFKMQLQFLW*LPHMPP
Trigger: CGGTGGCATGTGTGGTAACAACCAAAGAAATTGCAG...TTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS CCA 90 bp TTGGTCCACCATGAACTTTGCATCTTCTTCAGTGAAGCACATAGGTaGTTTTATTTTAAGTACATTTCTATGAGGTCCATCGGCACTGAG +
Preference number: 5 (lower is better)
Translates to: LVHHELCIFFSEAHR*FYFKYISMRSIGTE
Trigger: CTCAGTGCCGATGGACCTCATAGAAATGTACTTAAAATAAAACCACCTATGTGCTTCACTGAAGAAGATGCAAAGTTCATGGTGGACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000510706.5
ENST00000512646.5
CDS-3UTR CAA 90 bp ATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAATCTGGGCTCTCACTATTTaGATGGGATCCGATGCAAAG +
Preference number: 5 (lower is better)
Translates to: IYSFSVTLDIASCFKMQIWALTI*MGSDAK
Trigger: CTTTGCATCGGATCCCATCAAAATAGTGAGAGCCCA...GATTTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR CAA 90 bp CACATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAGCATACTCAACAATGTaGTCGTGGAGGAATCGAGAA +
Preference number: 5 (lower is better)
Translates to: HIYSFSVTLDIASCFKMQAYSTM*SWRNRE
Trigger: TTCTCGATTCCTCCACGACAACATTGTTGAGTATGC...TTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CAA 90 bp CACATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAGTTGCTGAAAGGCGTTaGGCATACTCAACAATGTTG +
Preference number: 5 (lower is better)
Translates to: HIYSFSVTLDIASCFKMQVAERR*AYSTML
Trigger: CAACATTGTTGAGTATGCCAAACGCCTTTCAGCAAC...TTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CAA 90 bp AATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCCGTAAGGCTAAGTCGTaGGCTTCGGATCCTGAATTT +
Preference number: 5 (lower is better)
Translates to: NSTFRGIIELLTDETHLLRKAKS*ASDPEF
Trigger: AAATTCAGGATCCGAAGCCAACGACTTAGCCTTACG...GAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR CAA 90 bp AGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACCGTAAGGCTAAGTCGTaGGCTTCGGATCCTGAATTT +
Preference number: 5 (lower is better)
Translates to: RGIIELLTDETHLLILCNRKAKS*ASDPEF
Trigger: AAATTCAGGATCCGAAGCCAACGACTTAGCCTTACG...GTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CAA 90 bp ATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAATCCGTAAGGCTAAGTCGTaGGCTTCGGATCCTGAATTT +
Preference number: 5 (lower is better)
Translates to: IYSFSVTLDIASCFKMQIRKAKS*ASDPEF
Trigger: AAATTCAGGATCCGAAGCCAACGACTTAGCCTTACG...GATTTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CAA 90 bp ACTGACAATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATTGCTGGAGGAATTATTaGTCCGCCACAACTCTGCAT +
Preference number: 5 (lower is better)
Translates to: TDNSTFRGIIELLTDETHCWRNY*SATTLH
Trigger: ATGCAGAGTTGTGGCGGACAAATAATTCCTCCAGCA...ATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATTGTCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR CAA 90 bp AGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTGCTGGAGGAATTATTaGTCCGCCACAACTCTGCAT +
Preference number: 5 (lower is better)
Translates to: RGIIELLTDETHLLILCNCWRNY*SATTLH
Trigger: ATGCAGAGTTGTGGCGGACAAATAATTCCTCCAGCA...GTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CAA 90 bp ATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAATCTGCTGGAGGAATTATTaGTCCGCCACAACTCTGCAT +
Preference number: 5 (lower is better)
Translates to: IYSFSVTLDIASCFKMQICWRNY*SATTLH
Trigger: ATGCAGAGTTGTGGCGGACAAATAATTCCTCCAGCA...GATTTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CAA 90 bp AGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACCTGCAATTTCTTTGGTaGTTACCACACATGCCACCG +
Preference number: 5 (lower is better)
Translates to: RGIIELLTDETHLLILCNLQFLW*LPHMPP
Trigger: CGGTGGCATGTGTGGTAACAACCAAAGAAATTGCAG...GTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CAA 90 bp AATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCCTGCAATTTCTTTGGTaGTTACCACACATGCCACCG +
Preference number: 5 (lower is better)
Translates to: NSTFRGIIELLTDETHLLLQFLW*LPHMPP
Trigger: CGGTGGCATGTGTGGTAACAACCAAAGAAATTGCAG...GAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR CAA 90 bp CACATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAGCTTCTGCAATTTCTTaGGTTGTTACCACACATGCC +
Preference number: 5 (lower is better)
Translates to: HIYSFSVTLDIASCFKMQASAIS*VVTTHA
Trigger: GGCATGTGTGGTAACAACCAAAGAAATTGCAGAAGC...TTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CAA 90 bp ACTGACAATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATCCATGGGCAACATTGTaGATGCAGTCCAAGTACTGT +
Preference number: 5 (lower is better)
Translates to: TDNSTFRGIIELLTDETHPWATL*MQSKYC
Trigger: ACAGTACTTGGACTGCATCAACAATGTTGCCCATGG...ATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATTGTCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411864.6
CDS-3UTR CAA 90 bp AGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACACTCCATGGGCAACATaGTTGATGCAGTCCAAGTAC +
Preference number: 5 (lower is better)
Translates to: RGIIELLTDETHLLILCNTPWAT*LMQSKY
Trigger: GTACTTGGACTGCATCAACAATGTTGCCCATGGAGT...GTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411864.6
CDS-3UTR CAA 90 bp AATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCACATGGGCAACATTGTaGATGCAGTCCAAGTACTGT +
Preference number: 5 (lower is better)
Translates to: NSTFRGIIELLTDETHLLTWATL*MQSKYC
Trigger: ACAGTACTTGGACTGCATCAACAATGTTGCCCATGT...GAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296486.8
CDS-3UTR CAA 90 bp AGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACGCATACTCAACAATGTaGTCGTGGAGGAATCGAGAA +
Preference number: 5 (lower is better)
Translates to: RGIIELLTDETHLLILCNAYSTM*SWRNRE
Trigger: TTCTCGATTCCTCCACGACAACATTGTTGAGTATGC...GTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CAA 90 bp GGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTCTGCATACTCAACAATGTaGTCGTGGAGGAATCGAGAA +
Preference number: 5 (lower is better)
Translates to: GIIELLTDETHLLILCNSAYSTM*SWRNRE
Trigger: TTCTCGATTCCTCCACGACAACATTGTTGAGTATGC...AGAGTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACC
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CAA 90 bp ATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAATCGTTGCTGAAAGGCGTTaGGCATACTCAACAATGTTG +
Preference number: 5 (lower is better)
Translates to: IYSFSVTLDIASCFKMQIVAERR*AYSTML
Trigger: CAACATTGTTGAGTATGCCAAACGCCTTTCAGCAAC...GATTTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CAA 90 bp AATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCGTTGCTGAAAGGCGTTaGGCATACTCAACAATGTTG +
Preference number: 5 (lower is better)
Translates to: NSTFRGIIELLTDETHLLVAERR*AYSTML
Trigger: CAACATTGTTGAGTATGCCAAACGCCTTTCAGCAAC...GAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR CAA 90 bp ACTGACAATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATGCTTCTGCAATTTCTTaGGTTGTTACCACACATGCC +
Preference number: 5 (lower is better)
Translates to: TDNSTFRGIIELLTDETHASAIS*VVTTHA
Trigger: GGCATGTGTGGTAACAACCAAAGAAATTGCAGAAGC...ATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATTGTCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR CAA 90 bp ATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAATCGCTTCTGCAATTTCTTaGGTTGTTACCACACATGCC +
Preference number: 5 (lower is better)
Translates to: IYSFSVTLDIASCFKMQIASAIS*VVTTHA
Trigger: GGCATGTGTGGTAACAACCAAAGAAATTGCAGAAGC...GATTTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CAA 90 bp ATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAATCGTCACACTTTCGGTTTaGGTTCCCATAGCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: IYSFSVTLDIASCFKMQIVTLSV*VPIASS
Trigger: AGAAGAAGCTATGGGAACCAAAACCGAAAGTGTGAC...GATTTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CAA 90 bp GGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTCTGTCACACTTTCGGTTTaGGTTCCCATAGCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: GIIELLTDETHLLILCNSVTLSV*VPIASS
Trigger: AGAAGAAGCTATGGGAACCAAAACCGAAAGTGTGAC...AGAGTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CAA 90 bp AATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCCAAATCAGTCATGTCTaGAGCCTCTTACTGAGCAGT +
Preference number: 5 (lower is better)
Translates to: NSTFRGIIELLTDETHLLQISHV*SLLLSS
Trigger: ACTGCTCAGTAAGAGGCTCAAGACATGACTGATTTG...GAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR CAA 90 bp ACTGACAATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATCAAATCAGTCATGTCTaGAGCCTCTTACTGAGCAGT +
Preference number: 5 (lower is better)
Translates to: TDNSTFRGIIELLTDETHQISHV*SLLLSS
Trigger: ACTGCTCAGTAAGAGGCTCAAGACATGACTGATTTG...ATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATTGTCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR CAA 90 bp ATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAATCCAAATCAGTCATGTCTaGAGCCTCTTACTGAGCAGT +
Preference number: 5 (lower is better)
Translates to: IYSFSVTLDIASCFKMQIQISHV*SLLLSS
Trigger: ACTGCTCAGTAAGAGGCTCAAGACATGACTGATTTG...GATTTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CAA 90 bp CACATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAGGAGGAATCGAGAATTaGTATTTAGCAGTTCCATCT +
Preference number: 5 (lower is better)
Translates to: HIYSFSVTLDIASCFKMQGGIEN*YLAVPS
Trigger: AGATGGAACTGCTAAATACAAATTCTCGATTCCTCC...TTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CAA 90 bp CACATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAATGTAAGTATCTGGAGTaGGTGCCACATGTACAAATT +
Preference number: 5 (lower is better)
Translates to: HIYSFSVTLDIASCFKMQCKYLE*VPHVQI
Trigger: AATTTGTACATGTGGCACCAACTCCAGATACTTACA...TTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CAA 90 bp GGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTCTTCTGCCAAAGCCCACTaGAACTTCATCAGCTATAAA +
Preference number: 5 (lower is better)
Translates to: GIIELLTDETHLLILCNSSAKAH*NFISYK
Trigger: TTTATAGCTGATGAAGTTCAAGTGGGCTTTGGCAGA...AGAGTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CAA 90 bp AGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTCTGCCAAAGCCCACTaGAACTTCATCAGCTATAAA +
Preference number: 5 (lower is better)
Translates to: RGIIELLTDETHLLILCNSAKAH*NFISYK
Trigger: TTTATAGCTGATGAAGTTCAAGTGGGCTTTGGCAGA...GTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CAA 90 bp AGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACGGAGGAATCGAGAATTaGTATTTAGCAGTTCCATCT +
Preference number: 5 (lower is better)
Translates to: RGIIELLTDETHLLILCNGGIEN*YLAVPS
Trigger: AGATGGAACTGCTAAATACAAATTCTCGATTCCTCC...GTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CAA 90 bp GGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTCTGGAGGAATCGAGAATTaGTATTTAGCAGTTCCATCT +
Preference number: 5 (lower is better)
Translates to: GIIELLTDETHLLILCNSGGIEN*YLAVPS
Trigger: AGATGGAACTGCTAAATACAAATTCTCGATTCCTCC...AGAGTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CAA 90 bp AGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTGTAAGTATCTGGAGTaGGTGCCACATGTACAAATT +
Preference number: 5 (lower is better)
Translates to: RGIIELLTDETHLLILCNCKYLE*VPHVQI
Trigger: AATTTGTACATGTGGCACCAACTCCAGATACTTACA...GTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CAA 90 bp CACATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAACTTCTTTCAGCATCTTaGTTTTGCATGGAGTATTCT +
Preference number: 5 (lower is better)
Translates to: HIYSFSVTLDIASCFKMQLLSAS*FCMEYS
Trigger: AGAATACTCCATGCAAAACAAAGATGCTGAAAGAAG...TTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGATGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CAA 90 bp AATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCGGCACCTGTTATACTTaGCTCTCTAATTTGACACAT +
Preference number: 5 (lower is better)
Translates to: NSTFRGIIELLTDETHLLGTCYT*LSNLTH
Trigger: ATGTGTCAAATTAGAGAGCAAAGTATAACAGGTGCC...GAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR CAA 90 bp ATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAATCGGCACCTGTTATACTTaGCTCTCTAATTTGACACAT +
Preference number: 5 (lower is better)
Translates to: IYSFSVTLDIASCFKMQIGTCYT*LSNLTH
Trigger: ATGTGTCAAATTAGAGAGCAAAGTATAACAGGTGCC...GATTTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS-3UTR CAA 90 bp ATCTACTCATTCTCTGTAACTCTGGACATCGCATCTTGCTTTAAAATGCAAATCTCTCTTGGCATTTCCTaGAAGGTCTTCATTTTCAAT +
Preference number: 5 (lower is better)
Translates to: IYSFSVTLDIASCFKMQISLGIS*KVFIFN
Trigger: ATTGAAAATGAAGACCTTCAAGGAAATGCCAAGAGA...GATTTGCATTTTAAAGCAAGATGCGATGTCCAGAGTTACAGAGAATGAGTAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CAA 90 bp GGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTCTTCTCTTGGCATTTCCTaGAAGGTCTTCATTTTCAAT +
Preference number: 5 (lower is better)
Translates to: GIIELLTDETHLLILCNSSLGIS*KVFIFN
Trigger: ATTGAAAATGAAGACCTTCAAGGAAATGCCAAGAGA...AGAGTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CAA 90 bp AGAGGTATAATAGAGCTATTAACCGATGAGACACATCTACTCATTCTCTGTAACTCTCTTGGCATTTCCTaGAAGGTCTTCATTTTCAAT +
Preference number: 5 (lower is better)
Translates to: RGIIELLTDETHLLILCNSLGIS*KVFIFN
Trigger: ATTGAAAATGAAGACCTTCAAGGAAATGCCAAGAGA...GTTACAGAGAATGAGTAGATGTGTCTCATCGGTTAATAGCTCTATTATACCTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS-3UTR CAA 90 bp ACTGACAATTCCACCTTTAGAGGTATAATAGAGCTATTAACCGATGAGACACATCTTCTTTCAGCATCTTaGTTTTGCATGGAGTATTCT +
Preference number: 5 (lower is better)
Translates to: TDNSTFRGIIELLTDETHLLSAS*FCMEYS
Trigger: AGAATACTCCATGCAAAACAAAGATGCTGAAAGAAG...ATGTGTCTCATCGGTTAATAGCTCTATTATACCTCTAAAGGTGGAATTGTCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000411864.6
CDS CCA 72 bp GGCGGCCCCGGCCGGCCTTCCTCCCGTTATCCCTCCTaGCGTTCTCTTGCCCGGGGCGTCGGAGGTCACCGG +
Preference number: 6 (lower is better)
Translates to: GGPGRPSSRYPS*RSLARGVGGHR
Trigger: CCGGTGACCTCCGACGCCCCGGGCAAGAGAACGCCAGGAGGGATAACGGGAGGAAGGCCGGCCGGGGCCGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000509402.1
ENST00000510706.5
CDS GCA 72 bp TGCAAGGTCTGCGCGCCTCCTACGCGAGCCTGGGACTaGCTTGGCGGCCCCGGCCGGCCTTCCTCCCGTTAT +
Preference number: 6 (lower is better)
Translates to: CKVCAPPTRAWD*LGGPGRPSSRY
Trigger: ATAACGGGAGGAAGGCCGGCCGGGGCCGCCAAGGCAGTCCCAGGCTCGCGTAGGAGGCGCGCAGACCTTGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000509402.1
ENST00000510706.5
CDS GCA 72 bp TGGTGGCGGGGTGCAGGGCGCTGCGAAGGTGCAAGGTaGAAGGTCTGCGCGCCTCCTACGCGAGCCTGGGAC +
Preference number: 6 (lower is better)
Translates to: WWRGAGRCEGAR*KVCAPPTRAWD
Trigger: GTCCCAGGCTCGCGTAGGAGGCGCGCAGACCTTGCACCTTGCACCTTCGCAGCGCCCTGCACCCCGCCACCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000509402.1
ENST00000510706.5
CDS GCA 72 bp GGTGCAGGGCGCTGCGAAGGTGCAAGGTGCAAGGTCTaGGCGCCTCCTACGCGAGCCTGGGACTGCCTTGGC +
Preference number: 6 (lower is better)
Translates to: GAGRCEGARCKV*APPTRAWDCLG
Trigger: GCCAAGGCAGTCCCAGGCTCGCGTAGGAGGCGCGCAGACCTTGCACCTTGCACCTTCGCAGCGCCCTGCACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000509402.1
ENST00000510706.5
CDS GCA 72 bp TGTACAGCTCGCACATGGTGGCGGGGTGCAGGGCGCTaGGAAGGTGCAAGGTGCAAGGTCTGCGCGCCTCCT +
Preference number: 6 (lower is better)
Translates to: CTARTWWRGAGR*EGARCKVCAPP
Trigger: AGGAGGCGCGCAGACCTTGCACCTTGCACCTTCGCAGCGCCCTGCACCCCGCCACCATGTGCGAGCTGTACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000509402.1
ENST00000510706.5
ENST00000512646.5
CDS CCA 72 bp GCCCCAGAGTGTCCCGCTTACTGTACAGCTCGCACATaGTGGCGGGGTGCAGGGCGCTGCGAAGGTGCAAGG +
Preference number: 6 (lower is better)
Translates to: APECPAYCTART*WRGAGRCEGAR
Trigger: CCTTGCACCTTCGCAGCGCCCTGCACCCCGCCACCATGTGCGAGCTGTACAGTAAGCGGGACACTCTGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000509402.1
ENST00000510706.5
ENST00000512646.5
CDS CCA 72 bp CCAGAGTGTCCCGCTTACTGTACAGCTCGCACATGGTaGCGGGGTGCAGGGCGCTGCGAAGGTGCAAGGTGC +
Preference number: 6 (lower is better)
Translates to: PECPAYCTARTW*RGAGRCEGARC
Trigger: GCACCTTGCACCTTCGCAGCGCCCTGCACCCCGCCACCATGTGCGAGCTGTACAGTAAGCGGGACACTCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000509402.1
ENST00000510706.5
ENST00000512646.5
CDS GCA 72 bp TCCCGCTTACTGTACAGCTCGCACATGGTGGCGGGGTaGAGGGCGCTGCGAAGGTGCAAGGTGCAAGGTCTG +
Preference number: 6 (lower is better)
Translates to: SRLLYSSHMVAG*RALRRCKVQGL
Trigger: CAGACCTTGCACCTTGCACCTTCGCAGCGCCCTGCACCCCGCCACCATGTGCGAGCTGTACAGTAAGCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000509402.1
ENST00000510706.5
ENST00000512646.5
CDS GCA 72 bp GTGTCCCATTCCGGGCCAGGGTGCCCTTACCCGATGTaGTTCTTCCTCAGCCCCAGAGTGTCCCGCTTACTG +
Preference number: 6 (lower is better)
Translates to: VSHSGPGCPYPM*FFLSPRVSRLL
Trigger: CAGTAAGCGGGACACTCTGGGGCTGAGGAAGAAGCACATCGGGTAAGGGCACCCTGGCCCGGAATGGGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512646.5
CDS GCA 72 bp ATGAGGGCTTCCGGGCCAGGGTGCCCTTACCCGATGTaGTTCTTCCTCAGCCCCAGAGTGTCCCGCTTACTG +
Preference number: 6 (lower is better)
Translates to: MRASGPGCPYPM*FFLSPRVSRLL
Trigger: CAGTAAGCGGGACACTCTGGGGCTGAGGAAGAAGCACATCGGGTAAGGGCACCCTGGCCCGGAAGCCCTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510706.5
CDS TCA 72 bp TCCATCTGTTTCAGGGCAGCTTTGACCACTCCTGGGTaGCAGTGTCCCATTCCGGGCCAGGGTGCCCTTACC +
Preference number: 6 (lower is better)
Translates to: SICFRAALTTPG*QCPIPGQGALT
Trigger: GGTAAGGGCACCCTGGCCCGGAATGGGACACTGTCACCCAGGAGTGGTCAAAGCTGCCCTGAAACAGATGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512646.5
CDS CCA 72 bp CAGTTCCATCTGTTTCAGGGCAGCTTTGACCACTCCTaGGTGACAGTGTCCCATTCCGGGCCAGGGTGCCCT +
Preference number: 6 (lower is better)
Translates to: QFHLFQGSFDHS*VTVSHSGPGCP
Trigger: AGGGCACCCTGGCCCGGAATGGGACACTGTCACCCAGGAGTGGTCAAAGCTGCCCTGAAACAGATGGAACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512646.5
CDS TCA 72 bp TCCATCTGTTTCAGGGCAGCTTTGACCACTCCTGGGTaGCAGTGTCCCACCGATGTGCTTCTTCCTCAGCCC +
Preference number: 6 (lower is better)
Translates to: SICFRAALTTPG*QCPTDVLLPQP
Trigger: GGGCTGAGGAAGAAGCACATCGGTGGGACACTGTCACCCAGGAGTGGTCAAAGCTGCCCTGAAACAGATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509402.1
CDS CCA 72 bp CGCTATCCTTCTTCCACCCATCTCCCATCCCTGGAATaGTGTCTGCTAGGGCTATTGGCCGTCATCCACCAA +
Preference number: 6 (lower is better)
Translates to: RYPSSTHLPSLE*CLLGLLAVIHQ
Trigger: TTGGTGGATGACGGCCAATAGCCCTAGCAGACACCATTCCAGGGATGGGAGATGGGTGGAAGAAGGATAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510723.1
CDS CCA 72 bp CAGTTCCATCTGTTTCAGGGCAGCTTTGACCACTCCTaGGTGACAGTGTCCCACCGATGTGCTTCTTCCTCA +
Preference number: 6 (lower is better)
Translates to: QFHLFQGSFDHS*VTVSHRCASSS
Trigger: TGAGGAAGAAGCACATCGGTGGGACACTGTCACCCAGGAGTGGTCAAAGCTGCCCTGAAACAGATGGAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509402.1
CDS TCA 72 bp TCCATCTGTTTCAGGGCAGCTTTGACCACTCCTGGGTaGCAGTGTCCCACATGGGCAACATTGTTGATGCAG +
Preference number: 6 (lower is better)
Translates to: SICFRAALTTPG*QCPTWATLLMQ
Trigger: CTGCATCAACAATGTTGCCCATGTGGGACACTGTCACCCAGGAGTGGTCAAAGCTGCCCTGAAACAGATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000510706.5
CDS GCA 72 bp GAAGGCTTCTGCAATTTCTTTGGTTGTTACCACACATaGCACCGGGTGGCCGTTGCCCATCGGTTTTCCCAT +
Preference number: 6 (lower is better)
Translates to: EGFCNFFGCYHT*HRVAVAHRFSH
Trigger: ATGGGAAAACCGATGGGCAACGGCCACCCGGTGGCATGTGTGGTAACAACCAAAGAAATTGCAGAAGCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000503912.1
ENST00000510706.5
ENST00000512646.5
CDS CCA 72 bp GCAATTTCTTTGGTTGTTACCACACATGCCACCGGGTaGCCGTTGCCCATCGGTTTTCCCATTGTGACGATG +
Preference number: 6 (lower is better)
Translates to: AISLVVTTHATG*PLPIGFPIVTM
Trigger: CATCGTCACAATGGGAAAACCGATGGGCAACGGCCACCCGGTGGCATGTGTGGTAACAACCAAAGAAATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000503912.1
ENST00000510706.5
ENST00000512646.5
CDS CCA 72 bp CAGTTCCATCTGTTTCAGGGCAGCTTTGACCACTCCTaGGTGACAGTGTCCCACATGGGCAACATTGTTGAT +
Preference number: 6 (lower is better)
Translates to: QFHLFQGSFDHS*VTVSHMGNIVD
Trigger: ATCAACAATGTTGCCCATGTGGGACACTGTCACCCAGGAGTGGTCAAAGCTGCCCTGAAACAGATGGAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000510706.5
CDS CCA 72 bp TTCACAGTTTCCAAAAACTTTCGAGTTGTGTGGGGGTaGCGGAGCGCTATCCTTCTTCCACCCATCTCCCAT +
Preference number: 6 (lower is better)
Translates to: FTVSKNFRVVWG*RSAILLPPISH
Trigger: ATGGGAGATGGGTGGAAGAAGGATAGCGCTCCGCCACCCCCACACAACTCGAAAGTTTTTGGAAACTGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000510723.1
ENST00000512320.1
CDS TCA 72 bp CTCCTGGGTGACAGTGTCCCACATGGGCAACATTGTTaGTGCAGTCCAAGTACTGTTCACCGTTCTCATCAA +
Preference number: 6 (lower is better)
Translates to: LLGDSVPHGQHC*CSPSTVHRSHQ
Trigger: TTGATGAGAACGGTGAACAGTACTTGGACTGCATCAACAATGTTGCCCATGTGGGACACTGTCACCCAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296486.8
ENST00000510706.5
CDS CCA 72 bp CAGAGAGTTTCTCCGGCAGAGTTGCTGAAAGGCGTTTaGCATACTCAACAATGTTGTCGTGGAGGAATCGAG +
Preference number: 6 (lower is better)
Translates to: QRVSPAELLKGV*HTQQCCRGGIE
Trigger: CTCGATTCCTCCACGACAACATTGTTGAGTATGCCAAACGCCTTTCAGCAACTCTGCCGGAGAAACTCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000509402.1
ENST00000510706.5
ENST00000510723.1
ENST00000512320.1
ENST00000512646.5
CDS TCA 72 bp GTGACAGTGTCCCACTTTATATTACTAAGTCGTTTGTaGCGGGGGCAAGACAAGCAGGCTGGGAAGAACACA +
Preference number: 6 (lower is better)
Translates to: VTVSHFILLSRL*RGQDKQAGKNT
Trigger: TGTGTTCTTCCCAGCCTGCTTGTCTTGCCCCCGTCACAAACGACTTAGTAATATAAAGTGGGACACTGTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512320.1
CDS CAA 72 bp ACAGAGAGTTTCTCCGGCAGAGTTGCTGAAAGGCGTTaGGCATACTCAACAATGTTGTCGTGGAGGAATCGA +
Preference number: 6 (lower is better)
Translates to: TESFSGRVAERR*AYSTMLSWRNR
Trigger: TCGATTCCTCCACGACAACATTGTTGAGTATGCCAAACGCCTTTCAGCAACTCTGCCGGAGAAACTCTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000509402.1
ENST00000510706.5
ENST00000510723.1
ENST00000512320.1
ENST00000512646.5
CDS CAA 90 bp TCACCGTTCTCATCAAACATGTACTGCCTCTGGGCTCTCACTATTTaGATGGGATCCGATGCAAAGAAAACTTTGCATGAGGGCCCGATG +
Preference number: 6 (lower is better)
Translates to: SPFSSNMYCLWALTI*MGSDAKKTLHEGPM
Trigger: CATCGGGCCCTCATGCAAAGTTTTCTTTGCATCGGATCCCATCAAAATAGTGAGAGCCCAGAGGCAGTACATGTTTGATGAGAACGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000505233.5
CDS CAA 90 bp TCACCGTTCTCATCAAACATGTACTGCCTCTGGGCTCTCACTATTTaGATGGGATCCGATGCAAAGAAAACTTTGCATGAGGGCTTCCGG +
Preference number: 6 (lower is better)
Translates to: SPFSSNMYCLWALTI*MGSDAKKTLHEGFR
Trigger: CCGGAAGCCCTCATGCAAAGTTTTCTTTGCATCGGATCCCATCAAAATAGTGAGAGCCCAGAGGCAGTACATGTTTGATGAGAACGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510706.5
CDS TCA 72 bp GCTAAGTCGTTGGCTTCGGATCATGGGCAACATTGTTaGTGCAGTCCAAGTACTGTTCACCGTTCTCATCAA +
Preference number: 6 (lower is better)
Translates to: AKSLASDHGQHC*CSPSTVHRSHQ
Trigger: TTGATGAGAACGGTGAACAGTACTTGGACTGCATCAACAATGTTGCCCATGATCCGAAGCCAACGACTTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505233.5
CDS CCA 72 bp CAGTTCCATCTGTTTCAGGGCAGCTTTGACCACTCCTaGGTGACAGTGTCCCACTTTATATTACTAAGTCGT +
Preference number: 6 (lower is better)
Translates to: QFHLFQGSFDHS*VTVSHFILLSR
Trigger: ACGACTTAGTAATATAAAGTGGGACACTGTCACCCAGGAGTGGTCAAAGCTGCCCTGAAACAGATGGAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512320.1
CDS CAA 90 bp TTCTCCGGCAGAGTTGCTGAAAGGCGTTTGGCATACTCAACAATGTaGTCGTGGAGGAATCGAGAATTTGTATTTAGCAGTTCCATCTGT +
Preference number: 6 (lower is better)
Translates to: FSGRVAERRLAYSTM*SWRNREFVFSSSIC
Trigger: ACAGATGGAACTGCTAAATACAAATTCTCGATTCCTCCACGACAACATTGTTGAGTATGCCAAACGCCTTTCAGCAACTCTGCCGGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000509402.1
ENST00000510706.5
ENST00000510723.1
ENST00000512320.1
ENST00000512646.5
CDS TCA 72 bp CATCAAACATGTACTGCCTCTGGGCTCTCACTATTTTaGTGGGATCCGATGCAAAGAAAACTTTGCATGAGG +
Preference number: 6 (lower is better)
Translates to: HQTCTASGLSLF*WDPMQRKLCMR
Trigger: CCTCATGCAAAGTTTTCTTTGCATCGGATCCCATCAAAATAGTGAGAGCCCAGAGGCAGTACATGTTTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000505233.5
ENST00000510706.5
CDS CAA 90 bp ACTCTGGACATCGCATCTTGCTTTAAAATGCAAATCAGTCATGTCTaGAGCCTCTTACTGAGCAGTGAATGTGTATCCGTGCACATTCCA +
Preference number: 6 (lower is better)
Translates to: TLDIASCFKMQISHV*SLLLSSECVSVHIP
Trigger: TGGAATGTGCACGGATACACATTCACTGCTCAGTAAGAGGCTCAAGACATGACTGATTTGCATTTTAAAGCAAGATGCGATGTCCAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000512646.5
CDS TCA 72 bp AAAATAACAAACAGAGAGTTTCTCCGGCAGAGTTGCTaGAAGGCGTTTGGCATACTCAACAATGTTGTCGTG +
Preference number: 6 (lower is better)
Translates to: KITNREFLRQSC*KAFGILNNVVV
Trigger: CACGACAACATTGTTGAGTATGCCAAACGCCTTTCAGCAACTCTGCCGGAGAAACTCTCTGTTTGTTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000509402.1
ENST00000510706.5
ENST00000510723.1
ENST00000512320.1
ENST00000512646.5
CDS TCA 72 bp GCAAATCAGTCATGTCTTGAGCCTCTTACTGAGCAGTaGATGTGTATCCGTGCACATTCCATTTCTCTTTCT +
Preference number: 6 (lower is better)
Translates to: ANQSCLEPLTEQ*MCIRAHSISLS
Trigger: AGAAAGAGAAATGGAATGTGCACGGATACACATTCACTGCTCAGTAAGAGGCTCAAGACATGACTGATTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000510706.5
ENST00000512646.5
CDS CCA 72 bp GCTGAAAGGCGTTTGGCATACTCAACAATGTTGTCGTaGAGGAATCGAGAATTTGTATTTAGCAGTTCCATC +
Preference number: 6 (lower is better)
Translates to: AERRLAYSTMLS*RNREFVFSSSI
Trigger: GATGGAACTGCTAAATACAAATTCTCGATTCCTCCACGACAACATTGTTGAGTATGCCAAACGCCTTTCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000509402.1
ENST00000510706.5
ENST00000510723.1
ENST00000512320.1
ENST00000512646.5
CDS CAA 72 bp TCATCAAACATGTACTGCCTCTGGGCTCTCACTATTTaGATGGGATCCGATGCAAAGAAAACTTTGCATGAG +
Preference number: 6 (lower is better)
Translates to: SSNMYCLWALTI*MGSDAKKTLHE
Trigger: CTCATGCAAAGTTTTCTTTGCATCGGATCCCATCAAAATAGTGAGAGCCCAGAGGCAGTACATGTTTGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000505233.5
ENST00000510706.5
CDS CAA 72 bp CATACTCAACAATGTTGTCGTGGAGGAATCGAGAATTaGTATTTAGCAGTTCCATCTGTTTCAGGGCAGCTT +
Preference number: 6 (lower is better)
Translates to: HTQQCCRGGIEN*YLAVPSVSGQL
Trigger: AAGCTGCCCTGAAACAGATGGAACTGCTAAATACAAATTCTCGATTCCTCCACGACAACATTGTTGAGTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000509402.1
ENST00000510706.5
ENST00000510723.1
ENST00000512320.1
ENST00000512646.5
CDS CAA 72 bp AGAGTTGCTGAAAGGCGTTTGGCATACTCAACAATGTaGTCGTGGAGGAATCGAGAATTTGTATTTAGCAGT +
Preference number: 6 (lower is better)
Translates to: RVAERRLAYSTM*SWRNREFVFSS
Trigger: ACTGCTAAATACAAATTCTCGATTCCTCCACGACAACATTGTTGAGTATGCCAAACGCCTTTCAGCAACTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000509402.1
ENST00000510706.5
ENST00000510723.1
ENST00000512320.1
ENST00000512646.5
CDS CCA 72 bp TATATCCAGGACAGCCAAACCAACAGCACAAGATACTaGATTTCCTCCATACGTATTAAAATATTCCATCCC +
Preference number: 6 (lower is better)
Translates to: YIQDSQTNSTRY*ISSIRIKIFHP
Trigger: GGGATGGAATATTTTAATACGTATGGAGGAAATCCAGTATCTTGTGCTGTTGGTTTGGCTGTCCTGGATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000503912.1
ENST00000510706.5
ENST00000512646.5
CDS CAA 72 bp CTCAGTGAGATAATTCCCTACTCTCTTGGCATTTCCTaGAAGGTCTTCATTTTCAATTATATCCAGGACAGC +
Preference number: 6 (lower is better)
Translates to: LSEIIPYSLGIS*KVFIFNYIQDS
Trigger: GCTGTCCTGGATATAATTGAAAATGAAGACCTTCAAGGAAATGCCAAGAGAGTAGGGAATTATCTCACTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000503912.1
ENST00000510706.5
ENST00000512646.5
CDS CAA 72 bp TTGCATGGAGTATTCTCAGAGGTCACACTTTCGGTTTaGGTTCCCATAGCTTCTTCTAAAACTGTTAGAATC +
Preference number: 6 (lower is better)
Translates to: LHGVFSEVTLSV*VPIASSKTVRI
Trigger: GATTCTAACAGTTTTAGAAGAAGCTATGGGAACCAAAACCGAAAGTGTGACCTCTGAGAATACTCCATGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296486.8
ENST00000411864.6
ENST00000510706.5
ENST00000512646.5