RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ETFA (Homo sapiens)

Ensembl gene IDs: ENSG00000140374

Ensembl transcript IDs: ENST00000267950.12, ENST00000433983.6, ENST00000557943.6, ENST00000557975.5, ENST00000558803.1, ENST00000559075.5, ENST00000559386.1, ENST00000559602.5, ENST00000559758.5, ENST00000560044.5, ENST00000560309.5, ENST00000560345.5, ENST00000560595.5, ENST00000560726.5, ENST00000560816.5, ENST00000560899.5, ENST00000561092.1, ENST00000565910.5

Found 392 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTACCCACGCCTTCCTGCAGGCCTGTTCAAAGCCTCACCAGCCTCTaGTCTTGGGCCTGCATCCACACCAGCTGCAGCCCTGGTGACACT +
Preference number: 1 (lower is better)
Translates to: LPTPSCRPVQSLTSL*SWACIHTSCSPGDT
Trigger: AGTGTCACCAGGGCTGCAGCTGGTGTGGATGCAGGCCCAAGAGCAGAGGCTGGTGAGGCTTTGAACAGGCCTGCAGGAAGGCGTGGGTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557943.6
3UTR GCA 90 bp AGGGCAGCCCTCTTTGTTCTACTCACCTACCTACCCACGCCTTCCTaGAGGCCTGTTCAAAGCCTCACCAGCCTCTGCTCTTGGGCCTGC +
Preference number: 1 (lower is better)
Translates to: RAALFVLLTYLPTPS*RPVQSLTSLCSWAC
Trigger: GCAGGCCCAAGAGCAGAGGCTGGTGAGGCTTTGAACAGGCCTGCAGGAAGGCGTGGGTAGGTAGGTGAGTAGAACAAAGAGGGCTGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557943.6
3UTR CCA 90 bp GCCCTGGGCAGCAGAATGAGAGTGCCAGAGGTGACTACACAGGCCTaGGTGCTTCCTAAGAGAGCCCAAAAGAAGCCAACAGAAGGCAAA +
Preference number: 1 (lower is better)
Translates to: ALGSRMRVPEVTTQA*VLPKRAQKKPTEGK
Trigger: TTTGCCTTCTGTTGGCTTCTTTTGGGCTCTCTTAGGAAGCACCCAGGCCTGTGTAGTCACCTCTGGCACTCTCATTCTGCTGCCCAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557943.6
3UTR CCA 90 bp CAAATCAGAAAGGGTTCACTAGTCAGCTGGGGAAGGGCCCCAGGCTaGTCACACAAAGGCACTCTAGCCACCTCCATCACTTATCACTTC +
Preference number: 1 (lower is better)
Translates to: QIRKGSLVSWGRAPG*SHKGTLATSITYHF
Trigger: GAAGTGATAAGTGATGGAGGTGGCTAGAGTGCCTTTGTGTGACCAGCCTGGGGCCCTTCCCCAGCTGACTAGTGAACCCTTTCTGATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557943.6
3UTR GCA 90 bp CTTGATTGCAATGATGTCAGAAATCGGGGCAACCTCAAGTTTGGCTaGTACTCTGGGCAAAAGGTTCTTTCCGAAGGCAGATGCTCCAGC +
Preference number: 1 (lower is better)
Translates to: LDCNDVRNRGNLKFG*YSGQKVLSEGRCSS
Trigger: GCTGGAGCATCTGCCTTCGGAAAGAACCTTTTGCCCAGAGTAGCAGCCAAACTTGAGGTTGCCCCGATTTCTGACATCATTGCAATCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267950.12
ENST00000560044.5
ENST00000560309.5
3UTR GCA 90 bp TCTCTTCCCTACTGTCTGCTTGATCCAGGTCACTACTCCTACTTCTaGAGATCTGATTCAGGAGGGCAGCCCTCTTTGTTCTACTCACCT +
Preference number: 1 (lower is better)
Translates to: SLPYCLLDPGHYSYF*RSDSGGQPSLFYSP
Trigger: AGGTGAGTAGAACAAAGAGGGCTGCCCTCCTGAATCAGATCTGCAGAAGTAGGAGTAGTGACCTGGATCAAGCAGACAGTAGGGAAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557943.6
3UTR CCA 90 bp GTTCTGGTGCTACTATTTTTCCCGTCTGTCCAACTTGCATGTCATTaGGAACAAAGCCAGCATCAACAGCAGCACGGGAAGCACCAACTG +
Preference number: 1 (lower is better)
Translates to: VLVLLFFPSVQLACH*EQSQHQQQHGKHQL
Trigger: CAGTTGGTGCTTCCCGTGCTGCTGTTGATGCTGGCTTTGTTCCCAATGACATGCAAGTTGGACAGACGGGAAAAATAGTAGCACCAGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
3UTR GCA 90 bp GCCTTTGTACACATCATGCTGAGCCACCAGAACTTTTGCTATGCCTaGTACTTTACAGAGATCTTGTGCCACCTTGTCACATTTGGTTCC +
Preference number: 1 (lower is better)
Translates to: AFVHIMLSHQNFCYA*YFTEILCHLVTFGS
Trigger: GGAACCAAATGTGACAAGGTGGCACAAGATCTCTGTAAAGTAGCAGGCATAGCAAAAGTTCTGGTGGCTCAGCATGATGTGTACAAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560044.5
3UTR GCA 90 bp GTAGGCCTTTGTACACATCATGCTGAGCCACCAGAACTTTTGCTATaGCTGCTACTTTACAGAGATCTTGTGCCACCTTGTCACATTTGG +
Preference number: 1 (lower is better)
Translates to: VGLCTHHAEPPELLL*LLLYRDLVPPCHIW
Trigger: CCAAATGTGACAAGGTGGCACAAGATCTCTGTAAAGTAGCAGGCATAGCAAAAGTTCTGGTGGCTCAGCATGATGTGTACAAAGGCCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560044.5
3UTR TCA 90 bp AATGGTGTCAGTTCCTCTGGAAGTAGGCCTTTGTACACATCATGCTaGGCCACCAGAACTTTTGCTATGCCTGCTACTTTACAGAGATCT +
Preference number: 1 (lower is better)
Translates to: NGVSSSGSRPLYTSC*ATRTFAMPATLQRS
Trigger: AGATCTCTGTAAAGTAGCAGGCATAGCAAAAGTTCTGGTGGCTCAGCATGATGTGTACAAAGGCCTACTTCCAGAGGAACTGACACCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560044.5
3UTR GCA 90 bp CTGCACAGGATTTTGAATGTTTATAATAACATCAAACTATCTGCTTaGATCAGAGGCCATGCTGTCTCAAAGCAGCCCCTCCTCCACTCT +
Preference number: 1 (lower is better)
Translates to: LHRILNVYNNIKLSA*IRGHAVSKQPLLHS
Trigger: AGAGTGGAGGAGGGGCTGCTTTGAGACAGCATGGCCTCTGATGCAAGCAGATAGTTTGATGTTATTATAAACATTCAAAATCCTGTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557943.6
3UTR GCA 90 bp AGATGCTCCAGCACAGATGTGTGTGTAATTGAACTGCTTCTGAGTTaGCAAAATCAATGGTGTCAGTTCCTCTTGTCACATTTGGTTCCA +
Preference number: 1 (lower is better)
Translates to: RCSSTDVCVIELLLS*QNQWCQFLLSHLVP
Trigger: TGGAACCAAATGTGACAAGAGGAACTGACACCATTGATTTTGGCAACTCAGAAGCAGTTCAATTACACACACATCTGTGCTGGAGCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560309.5
3UTR CCA 90 bp ACTTTGGCACCTGTTAGCTCTGGTCGATCACTTTTTGTTAATTTCTaGTCAAGCCACTCTGATATTTCCACTGGTGAAGTACTTGATGCC +
Preference number: 1 (lower is better)
Translates to: TLAPVSSGRSLFVNF*SSHSDISTGEVLDA
Trigger: GGCATCAAGTACTTCACCAGTGGAAATATCAGAGTGGCTTGACCAGAAATTAACAAAAAGTGATCGACCAGAGCTAACAGGTGCCAAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
3UTR CCA 90 bp TTGCCACAATTGTCTTGCTGTCTTTCATCCCAGCTAAATGTTGGATaGCTCCAGATATTCCAACAGCAATATAAAGTTCTGGTGCTACTA +
Preference number: 1 (lower is better)
Translates to: LPQLSCCLSSQLNVG*LQIFQQQYKVLVLL
Trigger: TAGTAGCACCAGAACTTTATATTGCTGTTGGAATATCTGGAGCCATCCAACATTTAGCTGGGATGAAAGACAGCAAGACAATTGTGGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267950.12
3UTR CCA 90 bp ATCTGCAACTATTCCATAATCTGCCACTTGGAAAATTGGAGCTTCTaGGTCTTTATTAATTGCCACAATTGTCTTGCTGTCTTTCATCCC +
Preference number: 1 (lower is better)
Translates to: ICNYSIICHLENWSF*VFINCHNCLAVFHP
Trigger: GGGATGAAAGACAGCAAGACAATTGTGGCAATTAATAAAGACCCAGAAGCTCCAATTTTCCAAGTGGCAGATTATGGAATAGTTGCAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267950.12
3UTR GCA 90 bp ATAATCTGCCACTTGGAAAATTGGAGCTTCTGGGTCTTTATTAATTaGCACAATTGTCTGGCATTGTATGTTGTGAAAACAGCTGGTATT +
Preference number: 1 (lower is better)
Translates to: IICHLENWSFWVFIN*HNCLALYVVKTAGI
Trigger: AATACCAGCTGTTTTCACAACATACAATGCCAGACAATTGTGGCAATTAATAAAGACCCAGAAGCTCCAATTTTCCAAGTGGCAGATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565910.5
3UTR-3UTR GCA 90 bp GGAAGGGCCCCAGGCTGGTCACACAAAGGCACTCTAGCCACCTCCATCACTTATCTCTGCTCTTGGGCCTaGATCCACACCAGCTGCAGC +
Preference number: 2 (lower is better)
Translates to: GRAPGWSHKGTLATSITYLCSWA*IHTSCS
Trigger: GCTGCAGCTGGTGTGGATGCAGGCCCAAGAGCAGAG...ATAAGTGATGGAGGTGGCTAGAGTGCCTTTGTGTGACCAGCCTGGGGCCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557943.6
3UTR CAA 90 bp CACTACTCCTACTTCTGCAGATCTGATTCAGGAGGGCAGCCCTCTTaGTTCTACTCACCTACCTACCCACGCCTTCCTGCAGGCCTGTTC +
Preference number: 2 (lower is better)
Translates to: HYSYFCRSDSGGQPS*FYSPTYPRLPAGLF
Trigger: GAACAGGCCTGCAGGAAGGCGTGGGTAGGTAGGTGAGTAGAACAAAGAGGGCTGCCCTCCTGAATCAGATCTGCAGAAGTAGGAGTAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557943.6
3UTR-3UTR GCA 90 bp CTCTGGGCAAAAGGTTCTTTCCGAAGGCAGATGCTCCAGCACAGATGTGTGTGTCTTTCCGAAGGCAGATaGTCCAGCACAGATGTGTGT +
Preference number: 2 (lower is better)
Translates to: LWAKGSFRRQMLQHRCVCLSEGR*SSTDVC
Trigger: ACACACATCTGTGCTGGAGCATCTGCCTTCGGAAAG...ACACACACATCTGTGCTGGAGCATCTGCCTTCGGAAAGAACCTTTTGCCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267950.12
ENST00000560044.5
ENST00000560309.5
3UTR-3UTR GCA 90 bp TGGCACTACCGCCACTTGTTGCTGCAGCATCAAAGGATGTTCCACGGACAGAAACTTTCCGAAGGCAGATaGTCCAGCACAGATGTGTGT +
Preference number: 2 (lower is better)
Translates to: WHYRHLLLQHQRMFHGQKLSEGR*SSTDVC
Trigger: ACACACATCTGTGCTGGAGCATCTGCCTTCGGAAAG...TTTCTGTCCGTGGAACATCCTTTGATGCTGCAGCAACAAGTGGCGGTAGTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
3UTR-3UTR GCA 90 bp CTTCTCTTCCCTACTGTCTGCTTGATCCAGGTCACTACTCCTACTTCTGCAGATTGCATCCACACCAGCTaGAGCCCTGGTGACACTCTT +
Preference number: 2 (lower is better)
Translates to: LLFPTVCLIQVTTPTSADCIHTS*SPGDTL
Trigger: AAGAGTGTCACCAGGGCTGCAGCTGGTGTGGATGCA...ATCTGCAGAAGTAGGAGTAGTGACCTGGATCAAGCAGACAGTAGGGAAGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557943.6
3UTR-3UTR CCA 90 bp ACTTGCATGTCATTGGGAACAAAGCCAGCATCAACAGCAGCACGGGAAGCACCAGGGCAACCTCAAGTTTaGCTGCTACTCTGGGCAAAA +
Preference number: 2 (lower is better)
Translates to: TCMSLGTKPASTAAREAPGQPQV*LLLWAK
Trigger: TTTTGCCCAGAGTAGCAGCCAAACTTGAGGTTGCCC...TGGTGCTTCCCGTGCTGCTGTTGATGCTGGCTTTGTTCCCAATGACATGCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
3UTR-3UTR GCA 90 bp CTTCTCTTCCCTACTGTCTGCTTGATCCAGGTCACTACTCCTACTTCTGCAGATTTGCATCAGAGGCCATaGTGTCTCAAAGCAGCCCCT +
Preference number: 2 (lower is better)
Translates to: LLFPTVCLIQVTTPTSADLHQRP*CLKAAP
Trigger: AGGGGCTGCTTTGAGACAGCATGGCCTCTGATGCAA...ATCTGCAGAAGTAGGAGTAGTGACCTGGATCAAGCAGACAGTAGGGAAGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557943.6
3UTR-3UTR GCA 90 bp CTTCTCTTCCCTACTGTCTGCTTGATCCAGGTCACTACTCCTACTTCTGCAGATCTACACAGGCCTGGGTaGTTCCTAAGAGAGCCCAAA +
Preference number: 2 (lower is better)
Translates to: LLFPTVCLIQVTTPTSADLHRPG*FLREPK
Trigger: TTTGGGCTCTCTTAGGAAGCACCCAGGCCTGTGTAG...ATCTGCAGAAGTAGGAGTAGTGACCTGGATCAAGCAGACAGTAGGGAAGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557943.6
3UTR-3UTR CCA 90 bp GCCCCAGGCTGGTCACACAAAGGCACTCTAGCCACCTCCATCACTTATCACTTCCTAAATACATGGAGCTaGGTCAGGTTTAAGTCAGGT +
Preference number: 2 (lower is better)
Translates to: APGWSHKGTLATSITYHFLNTWS*VRFKSG
Trigger: ACCTGACTTAAACCTGACCCAGCTCCATGTATTTAG...GAAGTGATAAGTGATGGAGGTGGCTAGAGTGCCTTTGTGTGACCAGCCTGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557943.6
3UTR-3UTR CCA 90 bp ACTTGCATGTCATTGGGAACAAAGCCAGCATCAACAGCAGCACGGGAAGCACCACCACCTTGTCACATTTaGTTCCAGCTACTAAGCAGG +
Preference number: 2 (lower is better)
Translates to: TCMSLGTKPASTAAREAPPPCHI*FQLLSR
Trigger: CCTGCTTAGTAGCTGGAACCAAATGTGACAAGGTGG...TGGTGCTTCCCGTGCTGCTGTTGATGCTGGCTTTGTTCCCAATGACATGCAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560044.5
3UTR CAA 90 bp GGTGACTTGATTGCAATGATGTCAGAAATCGGGGCAACCTCAAGTTaGGCTGCTACTCTGGGCAAAAGGTTCTTTCCGAAGGCAGATGCT +
Preference number: 2 (lower is better)
Translates to: GDLIAMMSEIGATSS*AATLGKRFFPKADA
Trigger: AGCATCTGCCTTCGGAAAGAACCTTTTGCCCAGAGTAGCAGCCAAACTTGAGGTTGCCCCGATTTCTGACATCATTGCAATCAAGTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267950.12
ENST00000560044.5
ENST00000560309.5
3UTR CAA 90 bp AGTTCTGGTGCTACTATTTTTCCCGTCTGTCCAACTTGCATGTCATaGGGAACAAAGCCAGCATCAACAGCAGCACGGGAAGCACCAACT +
Preference number: 2 (lower is better)
Translates to: SSGATIFPVCPTCMS*GTKPASTAAREAPT
Trigger: AGTTGGTGCTTCCCGTGCTGCTGTTGATGCTGGCTTTGTTCCCAATGACATGCAAGTTGGACAGACGGGAAAAATAGTAGCACCAGAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
3UTR CAA 90 bp CCACCTCCATCACTTATCACTTCCCTTCTCTTCCCTACTGTCTGCTaGATCCAGGTCACTACTCCTACTTCTGCAGATCTGATTCAGGAG +
Preference number: 2 (lower is better)
Translates to: PPPSLITSLLFPTVC*IQVTTPTSADLIQE
Trigger: CTCCTGAATCAGATCTGCAGAAGTAGGAGTAGTGACCTGGATCAAGCAGACAGTAGGGAAGAGAAGGGAAGTGATAAGTGATGGAGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557943.6
3UTR-3UTR TCA 90 bp CAAGTTTGGCTGCTACTCTGGGCAAAAGGTTCTTTCCGAAGGCAGATGCTCCAGATTACCAGGGTACTCTaGAATCGTAGCAATGAGGCA +
Preference number: 2 (lower is better)
Translates to: QVWLLLWAKGSFRRQMLQITRVL*NRSNEA
Trigger: TGCCTCATTGCTACGATTTCAGAGTACCCTGGTAAT...CTGGAGCATCTGCCTTCGGAAAGAACCTTTTGCCCAGAGTAGCAGCCAAACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560044.5
ENST00000560309.5
3UTR CAA 90 bp CTGGTGAAGTACTTGATGCCTTTTCTGAACTGGCACTACCGCCACTaGTTGCTGCAGCATCAAAGGATGTTCCACGGACAGAAAACACTT +
Preference number: 2 (lower is better)
Translates to: LVKYLMPFLNWHYRH*LLQHQRMFHGQKTL
Trigger: AAGTGTTTTCTGTCCGTGGAACATCCTTTGATGCTGCAGCAACAAGTGGCGGTAGTGCCAGTTCAGAAAAGGCATCAAGTACTTCACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
3UTR CAA 90 bp CTGGAAGTAGGCCTTTGTACACATCATGCTGAGCCACCAGAACTTTaGCTATGCCTGCTACTTTACAGAGATCTTGTGCCACCTTGTCAC +
Preference number: 2 (lower is better)
Translates to: LEVGLCTHHAEPPEL*LCLLLYRDLVPPCH
Trigger: GTGACAAGGTGGCACAAGATCTCTGTAAAGTAGCAGGCATAGCAAAAGTTCTGGTGGCTCAGCATGATGTGTACAAAGGCCTACTTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560044.5
3UTR-3UTR TCA 90 bp CTCTGGGCAAAAGGTTCTTTCCGAAGGCAGATGCTCCAGCACAGATGTGTGTGTAGATGTGTGTGTAATTaGACTGCTTCTGAGTTGCCA +
Preference number: 2 (lower is better)
Translates to: LWAKGSFRRQMLQHRCVCRCVCN*TASELP
Trigger: TGGCAACTCAGAAGCAGTTCAATTACACACACATCT...ACACACACATCTGTGCTGGAGCATCTGCCTTCGGAAAGAACCTTTTGCCCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267950.12
ENST00000560044.5
ENST00000560309.5
3UTR-3UTR GCA 90 bp CTTGATTGCAATGATGTCAGAAATCGGGGCAACCTCAAGTTTGGCTGCTACTCTCTTTCCGAAGGCAGATaGTCCAGCACAGATGTGTGT +
Preference number: 2 (lower is better)
Translates to: LDCNDVRNRGNLKFGCYSLSEGR*SSTDVC
Trigger: ACACACATCTGTGCTGGAGCATCTGCCTTCGGAAAG...AGAGTAGCAGCCAAACTTGAGGTTGCCCCGATTTCTGACATCATTGCAATCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267950.12
ENST00000560044.5
ENST00000560309.5
3UTR-3UTR GCA 90 bp CGACCACCAGATACCACCACTTTGGCACCTGTTAGCTCTGGTCGATCACTTTTTAACCTCAAGTTTGGCTaGTACTCTGGGCAAAAGGTT +
Preference number: 2 (lower is better)
Translates to: RPPDTTTLAPVSSGRSLFNLKFG*YSGQKV
Trigger: AACCTTTTGCCCAGAGTAGCAGCCAAACTTGAGGTT...AAAAAGTGATCGACCAGAGCTAACAGGTGCCAAAGTGGTGGTATCTGGTGGTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
3UTR-3UTR GCA 90 bp TTTTTCCCGTCTGTCCAACTTGCATGTCATTGGGAACAAAGCCAGCATCAACAGACCGCCACTTGTTGCTaGAGCATCAAAGGATGTTCC +
Preference number: 2 (lower is better)
Translates to: FFPSVQLACHWEQSQHQQTATCC*SIKGCS
Trigger: GGAACATCCTTTGATGCTGCAGCAACAAGTGGCGGT...CTGTTGATGCTGGCTTTGTTCCCAATGACATGCAAGTTGGACAGACGGGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
3UTR-3UTR CCA 90 bp ACCGCCACTTGTTGCTGCAGCATCAAAGGATGTTCCACGGACAGAAAACACTTTGTTTGGCTGCTACTCTaGGCAAAAGGTTCTTTCCGA +
Preference number: 2 (lower is better)
Translates to: TATCCCSIKGCSTDRKHFVWLLL*AKGSFR
Trigger: TCGGAAAGAACCTTTTGCCCAGAGTAGCAGCCAAAC...AAAGTGTTTTCTGTCCGTGGAACATCCTTTGATGCTGCAGCAACAAGTGGCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
3UTR-3UTR CCA 90 bp GGCAGATGCTCCAGCACAGATGTGTGTGTAATTGAACTGCTTCTGAGTTGCCAAGTTTGGCTGCTACTCTaGGCAAAAGGTTCTTTCCGA +
Preference number: 2 (lower is better)
Translates to: GRCSSTDVCVIELLLSCQVWLLL*AKGSFR
Trigger: TCGGAAAGAACCTTTTGCCCAGAGTAGCAGCCAAAC...TTGGCAACTCAGAAGCAGTTCAATTACACACACATCTGTGCTGGAGCATCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267950.12
ENST00000560044.5
ENST00000560309.5
3UTR-3UTR CCA 90 bp ATGTCAGAAATCGGGGCAACCTCAAGTTTGGCTGCTACTCTGGGCAAAAGGTTCTCCTCTTGTCACATTTaGTTCCAGCTACTAAGCAGG +
Preference number: 2 (lower is better)
Translates to: MSEIGATSSLAATLGKRFSSCHI*FQLLSR
Trigger: CCTGCTTAGTAGCTGGAACCAAATGTGACAAGAGGA...GAACCTTTTGCCCAGAGTAGCAGCCAAACTTGAGGTTGCCCCGATTTCTGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560309.5
3UTR CAA 90 bp GTGAAGTACTTGATGCCTTTTCTGAACTGGCACTACCGCCACTTGTaGCTGCAGCATCAAAGGATGTTCCACGGACAGAAAACACTTTCA +
Preference number: 2 (lower is better)
Translates to: VKYLMPFLNWHYRHL*LQHQRMFHGQKTLS
Trigger: TGAAAGTGTTTTCTGTCCGTGGAACATCCTTTGATGCTGCAGCAACAAGTGGCGGTAGTGCCAGTTCAGAAAAGGCATCAAGTACTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
3UTR-3UTR TCA 90 bp CACTACCGCCACTTGTTGCTGCAGCATCAAAGGATGTTCCACGGACAGAAAACAAGATGTGTGTGTAATTaGACTGCTTCTGAGTTGCCA +
Preference number: 2 (lower is better)
Translates to: HYRHLLLQHQRMFHGQKTRCVCN*TASELP
Trigger: TGGCAACTCAGAAGCAGTTCAATTACACACACATCT...TGTTTTCTGTCCGTGGAACATCCTTTGATGCTGCAGCAACAAGTGGCGGTAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
3UTR-3UTR TCA 90 bp GATGTCAGAAATCGGGGCAACCTCAAGTTTGGCTGCTACTCTGGGCAAAAGGTTAGATGTGTGTGTAATTaGACTGCTTCTGAGTTGCCA +
Preference number: 2 (lower is better)
Translates to: DVRNRGNLKFGCYSGQKVRCVCN*TASELP
Trigger: TGGCAACTCAGAAGCAGTTCAATTACACACACATCT...AACCTTTTGCCCAGAGTAGCAGCCAAACTTGAGGTTGCCCCGATTTCTGACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267950.12
ENST00000560044.5
ENST00000560309.5
3UTR-3UTR GCA 90 bp CACTACCGCCACTTGTTGCTGCAGCATCAAAGGATGTTCCACGGACAGAAAACAAGGGAATCATTTGCATaGTCAGCTATTACCAGGGTA +
Preference number: 2 (lower is better)
Translates to: HYRHLLLQHQRMFHGQKTRESFA*SAITRV
Trigger: TACCCTGGTAATAGCTGAGCATGCAAATGATTCCCT...TGTTTTCTGTCCGTGGAACATCCTTTGATGCTGCAGCAACAAGTGGCGGTAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560044.5
3UTR-3UTR GCA 90 bp GTCAGAAATCGGGGCAACCTCAAGTTTGGCTGCTACTCTGGGCAAAAGGTTCTTAGGGAATCATTTGCATaGTCAGCTATTACCAGGGTA +
Preference number: 2 (lower is better)
Translates to: VRNRGNLKFGCYSGQKVLRESFA*SAITRV
Trigger: TACCCTGGTAATAGCTGAGCATGCAAATGATTCCCT...AAGAACCTTTTGCCCAGAGTAGCAGCCAAACTTGAGGTTGCCCCGATTTCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560044.5
ENST00000560309.5
3UTR-3UTR GCA 90 bp TGCAATGATGTCAGAAATCGGGGCAACCTCAAGTTTGGCTGCTACTCTGGGCAAAGCCACCAGAACTTTTaGTATGCCTGCTACTTTACA +
Preference number: 2 (lower is better)
Translates to: CNDVRNRGNLKFGCYSGQSHQNF*YACYFT
Trigger: TGTAAAGTAGCAGGCATAGCAAAAGTTCTGGTGGCT...TTGCCCAGAGTAGCAGCCAAACTTGAGGTTGCCCCGATTTCTGACATCATTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560044.5
3UTR-3UTR CCA 90 bp GCCACAATTGTCTTGCTGTCTTTCATCCCAGCTAAATGTTGGATGGCTCCAGATGTTTGGCTGCTACTCTaGGCAAAAGGTTCTTTCCGA +
Preference number: 2 (lower is better)
Translates to: ATIVLLSFIPAKCWMAPDVWLLL*AKGSFR
Trigger: TCGGAAAGAACCTTTTGCCCAGAGTAGCAGCCAAAC...ATCTGGAGCCATCCAACATTTAGCTGGGATGAAAGACAGCAAGACAATTGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267950.12
3UTR-3UTR CCA 90 bp AATGTGTCAGGTGACTTGATTGCAATGATGTCAGAAATCGGGGCAACCTCAAGTGGGCAACCTCAAGTTTaGCTGCTACTCTGGGCAAAA +
Preference number: 2 (lower is better)
Translates to: NVSGDLIAMMSEIGATSSGQPQV*LLLWAK
Trigger: TTTTGCCCAGAGTAGCAGCCAAACTTGAGGTTGCCC...ACTTGAGGTTGCCCCGATTTCTGACATCATTGCAATCAAGTCACCTGACACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267950.12
ENST00000560044.5
ENST00000560309.5
3UTR CAA 90 bp AGCAATATAAAGTTCTGGTGCTACTATTTTTCCCGTCTGTCCAACTaGCATGTCATTGGGAACAAAGCCAGCATCAACAGCAGCACGGGA +
Preference number: 2 (lower is better)
Translates to: SNIKFWCYYFSRLSN*HVIGNKASINSSTG
Trigger: TCCCGTGCTGCTGTTGATGCTGGCTTTGTTCCCAATGACATGCAAGTTGGACAGACGGGAAAAATAGTAGCACCAGAACTTTATATTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
3UTR-3UTR GCA 90 bp ATTTTTCCCGTCTGTCCAACTTGCATGTCATTGGGAACAAAGCCAGCATCAACACCCGTCTGTCCAACTTaGATGTCATTGGGAACAAAG +
Preference number: 2 (lower is better)
Translates to: IFPVCPTCMSLGTKPASTPVCPT*MSLGTK
Trigger: CTTTGTTCCCAATGACATGCAAGTTGGACAGACGGG...TGTTGATGCTGGCTTTGTTCCCAATGACATGCAAGTTGGACAGACGGGAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
3UTR-3UTR CCA 90 bp TGGCACCTGTTAGCTCTGGTCGATCACTTTTTGTTAATTTCTGGTCAAGCCACTATGCCTTTTCTGAACTaGCACTACCGCCACTTGTTG +
Preference number: 2 (lower is better)
Translates to: WHLLALVDHFLLISGQATMPFLN*HYRHLL
Trigger: CAACAAGTGGCGGTAGTGCCAGTTCAGAAAAGGCAT...AGTGGCTTGACCAGAAATTAACAAAAAGTGATCGACCAGAGCTAACAGGTGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
3UTR-3UTR CCA 90 bp ACAAATGTGTCAGGTGACTTGATTGCAATGATGTCAGAAATCGGGGCAACCTCAATGCCTTTTCTGAACTaGCACTACCGCCACTTGTTG +
Preference number: 2 (lower is better)
Translates to: TNVSGDLIAMMSEIGATSMPFLN*HYRHLL
Trigger: CAACAAGTGGCGGTAGTGCCAGTTCAGAAAAGGCAT...TGAGGTTGCCCCGATTTCTGACATCATTGCAATCAAGTCACCTGACACATTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
3UTR-3UTR CCA 90 bp ATGTCAGAAATCGGGGCAACCTCAAGTTTGGCTGCTACTCTGGGCAAAAGGTTCAGTTGCCAAAATCAATaGTGTCAGTTCCTCTTGTCA +
Preference number: 2 (lower is better)
Translates to: MSEIGATSSLAATLGKRFSCQNQ*CQFLLS
Trigger: TGACAAGAGGAACTGACACCATTGATTTTGGCAACT...GAACCTTTTGCCCAGAGTAGCAGCCAAACTTGAGGTTGCCCCGATTTCTGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560309.5
3UTR CAA 90 bp CAGATACCACCACTTTGGCACCTGTTAGCTCTGGTCGATCACTTTTaGTTAATTTCTGGTCAAGCCACTCTGATATTTCCACTGGTGAAG +
Preference number: 2 (lower is better)
Translates to: QIPPLWHLLALVDHF*LISGQATLIFPLVK
Trigger: CTTCACCAGTGGAAATATCAGAGTGGCTTGACCAGAAATTAACAAAAAGTGATCGACCAGAGCTAACAGGTGCCAAAGTGGTGGTATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
3UTR-3UTR TCA 90 bp CTTCTCTTCCCTACTGTCTGCTTGATCCAGGTCACTACTCCTACTTCTGCAGATAGTTACCTTCTCCTATaGAGTTTGCCCTTCAACAAT +
Preference number: 2 (lower is better)
Translates to: LLFPTVCLIQVTTPTSADSYLLL*SLPFNN
Trigger: ATTGTTGAAGGGCAAACTTCATAGGAGAAGGTAACT...ATCTGCAGAAGTAGGAGTAGTGACCTGGATCAAGCAGACAGTAGGGAAGAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557943.6
3UTR-3UTR GCA 90 bp CCACTGGTGAAGTACTTGATGCCTTTTCTGAACTGGCACTACCGCCACTTGTTGAACTTTTGCTATGCCTaGTACTTTACAGAGATCTTG +
Preference number: 2 (lower is better)
Translates to: PLVKYLMPFLNWHYRHLLNFCYA*YFTEIL
Trigger: CAAGATCTCTGTAAAGTAGCAGGCATAGCAAAAGTT...CAACAAGTGGCGGTAGTGCCAGTTCAGAAAAGGCATCAAGTACTTCACCAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560044.5
3UTR-3UTR TCA 90 bp ATTGCCACAATTGTCTTGCTGTCTTTCATCCCAGCTAAATGTTGGATGGCTCCAACTGCAGCATGTAGTTaGTCTGCCAAGTCATATAAC +
Preference number: 2 (lower is better)
Translates to: IATIVLLSFIPAKCWMAPTAACS*SAKSYN
Trigger: GTTATATGACTTGGCAGATCAACTACATGCTGCAGT...TGGAGCCATCCAACATTTAGCTGGGATGAAAGACAGCAAGACAATTGTGGCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267950.12
3UTR-3UTR GCA 90 bp CTTCCCTACTGTCTGCTTGATCCAGGTCACTACTCCTACTTCTGCAGATCTGATGGTTTAAGTCAGGTCTaGTTTTGTCACATTAGCTAT +
Preference number: 2 (lower is better)
Translates to: LPYCLLDPGHYSYFCRSDGLSQV*FCHISY
Trigger: ATAGCTAATGTGACAAAAGCAGACCTGACTTAAACC...ATCAGATCTGCAGAAGTAGGAGTAGTGACCTGGATCAAGCAGACAGTAGGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557943.6
3UTR-3UTR TCA 90 bp AATATAAAGTTCTGGTGCTACTATTTTTCCCGTCTGTCCAACTTGCATGTCATTATTACCAGGGTACTCTaGAATCGTAGCAATGAGGCA +
Preference number: 2 (lower is better)
Translates to: NIKFWCYYFSRLSNLHVIITRVL*NRSNEA
Trigger: TGCCTCATTGCTACGATTTCAGAGTACCCTGGTAAT...AATGACATGCAAGTTGGACAGACGGGAAAAATAGTAGCACCAGAACTTTATATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560044.5
3UTR-3UTR TCA 90 bp AATATAAAGTTCTGGTGCTACTATTTTTCCCGTCTGTCCAACTTGCATGTCATTACTGCAGCATGTAGTTaGTCTGCCAAGTCATATAAC +
Preference number: 2 (lower is better)
Translates to: NIKFWCYYFSRLSNLHVITAACS*SAKSYN
Trigger: GTTATATGACTTGGCAGATCAACTACATGCTGCAGT...AATGACATGCAAGTTGGACAGACGGGAAAAATAGTAGCACCAGAACTTTATATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
3UTR-3UTR GCA 90 bp TGTAGCTCTCCATGCTTTCCAATGATTGTTATAATACCCACAAATATCTGTGATAACCTCAAGTTTGGCTaGTACTCTGGGCAAAAGGTT +
Preference number: 2 (lower is better)
Translates to: CSSPCFPMIVIIPTNICDNLKFG*YSGQKV
Trigger: AACCTTTTGCCCAGAGTAGCAGCCAAACTTGAGGTT...ATCACAGATATTTGTGGGTATTATAACAATCATTGGAAAGCATGGAGAGCTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267950.12
3UTR-3UTR TCA 90 bp TGTAGCTCTCCATGCTTTCCAATGATTGTTATAATACCCACAAATATCTGTGATATGAGATTAGTAGGTTaGTTAGGCTGGTGGAGACAA +
Preference number: 2 (lower is better)
Translates to: CSSPCFPMIVIIPTNICDMRLVG*LGWWRQ
Trigger: TTGTCTCCACCAGCCTAATCAACCTACTAATCTCAT...ATCACAGATATTTGTGGGTATTATAACAATCATTGGAAAGCATGGAGAGCTACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433983.6
ENST00000557943.6
3UTR-3UTR GCA 90 bp AAATTTACCTTAAGCCAACTAAATACATGGAGCTGGGTCAGGTTTAAGTCAGGTTTCTCCTATGAAGTTTaGCCTTCAACAATGAGATTA +
Preference number: 2 (lower is better)
Translates to: KFTLSQLNTWSWVRFKSGFSYEV*PSTMRL
Trigger: TAATCTCATTGTTGAAGGGCAAACTTCATAGGAGAA...ACCTGACTTAAACCTGACCCAGCTCCATGTATTTAGTTGGCTTAAGGTAAATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557943.6
3UTR-3UTR GCA 90 bp TCACTTTTTGTTAATTTCTGGTCAAGCCACTCTGATATTTCCACTGGTGAAGTAAATATAAAGTTCTGGTaGTACTATTTTTCCCGTCTG +
Preference number: 2 (lower is better)
Translates to: SLFVNFWSSHSDISTGEVNIKFW*YYFSRL
Trigger: CAGACGGGAAAAATAGTAGCACCAGAACTTTATATT...TACTTCACCAGTGGAAATATCAGAGTGGCTTGACCAGAAATTAACAAAAAGTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
3UTR-3UTR GCA 90 bp TGTAGCTCTCCATGCTTTCCAATGATTGTTATAATACCCACAAATATCTGTGATAACTATTCCATAATCTaGCACTTGGAAAATTGGAGC +
Preference number: 2 (lower is better)
Translates to: CSSPCFPMIVIIPTNICDNYSII*HLENWS
Trigger: GCTCCAATTTTCCAAGTGGCAGATTATGGAATAGTT...ATCACAGATATTTGTGGGTATTATAACAATCATTGGAAAGCATGGAGAGCTACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000565910.5
3UTR-3UTR GCA 90 bp TGTAGCTCTCCATGCTTTCCAATGATTGTTATAATACCCACAAATATCTGTGATTGGGTCTTTATTAATTaGCACAATTGTCTGGCATTG +
Preference number: 2 (lower is better)
Translates to: CSSPCFPMIVIIPTNICDWVFIN*HNCLAL
Trigger: CAATGCCAGACAATTGTGGCAATTAATAAAGACCCA...ATCACAGATATTTGTGGGTATTATAACAATCATTGGAAAGCATGGAGAGCTACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565910.5
3UTR-3UTR CCA 90 bp TGTAGCTCTCCATGCTTTCCAATGATTGTTATAATACCCACAAATATCTGTGATGAAAATTGGAGCTTCTaGGTCTTTATTAATTGCCAC +
Preference number: 2 (lower is better)
Translates to: CSSPCFPMIVIIPTNICDENWSF*VFINCH
Trigger: GTGGCAATTAATAAAGACCCAGAAGCTCCAATTTTC...ATCACAGATATTTGTGGGTATTATAACAATCATTGGAAAGCATGGAGAGCTACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000565910.5
3UTR CCA 72 bp AAGGGTTCACTAGTCAGCTGGGGAAGGGCCCCAGGCTaGTCACACAAAGGCACTCTAGCCACCTCCATCACT +
Preference number: 3 (lower is better)
Translates to: KGSLVSWGRAPG*SHKGTLATSIT
Trigger: AGTGATGGAGGTGGCTAGAGTGCCTTTGTGTGACCAGCCTGGGGCCCTTCCCCAGCTGACTAGTGAACCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557943.6
3UTR-3UTR CAA 90 bp CCTCAGCTGTGCCCTGGGCAGCAGAATGAGAGTGCCAGAGGTGACTACACAGGCCATCAAACTATCTGCTaGCATCAGAGGCCATGCTGT +
Preference number: 3 (lower is better)
Translates to: PQLCPGQQNESARGDYTGHQTIC*HQRPCC
Trigger: ACAGCATGGCCTCTGATGCAAGCAGATAGTTTGATG...GCCTGTGTAGTCACCTCTGGCACTCTCATTCTGCTGCCCAGGGCACAGCTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557943.6
3UTR-3UTR CAA 90 bp GCCCCAGGCTGGTCACACAAAGGCACTCTAGCCACCTCCATCACTTATCACTTCGGAGGGCAGCCCTCTTaGTTCTACTCACCTACCTAC +
Preference number: 3 (lower is better)
Translates to: APGWSHKGTLATSITYHFGGQPS*FYSPTY
Trigger: GTAGGTAGGTGAGTAGAACAAAGAGGGCTGCCCTCC...GAAGTGATAAGTGATGGAGGTGGCTAGAGTGCCTTTGTGTGACCAGCCTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557943.6
3UTR-3UTR CAA 90 bp GGGGCAACCTCAAGTTTGGCTGCTACTCTGGGCAAAAGGTTCTTTCCGAAGGCAGGGGCAACCTCAAGTTaGGCTGCTACTCTGGGCAAA +
Preference number: 3 (lower is better)
Translates to: GATSSLAATLGKRFFPKAGATSS*AATLGK
Trigger: TTTGCCCAGAGTAGCAGCCAAACTTGAGGTTGCCCC...TGCCTTCGGAAAGAACCTTTTGCCCAGAGTAGCAGCCAAACTTGAGGTTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267950.12
ENST00000560044.5
ENST00000560309.5
3UTR CCA 72 bp CAGAAATCGGGGCAACCTCAAGTTTGGCTGCTACTCTaGGCAAAAGGTTCTTTCCGAAGGCAGATGCTCCAG +
Preference number: 3 (lower is better)
Translates to: QKSGQPQVWLLL*AKGSFRRQMLQ
Trigger: CTGGAGCATCTGCCTTCGGAAAGAACCTTTTGCCCAGAGTAGCAGCCAAACTTGAGGTTGCCCCGATTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267950.12
ENST00000560044.5
ENST00000560309.5
3UTR CCA 72 bp AGCAGAATGAGAGTGCCAGAGGTGACTACACAGGCCTaGGTGCTTCCTAAGAGAGCCCAAAAGAAGCCAACA +
Preference number: 3 (lower is better)
Translates to: SRMRVPEVTTQA*VLPKRAQKKPT
Trigger: TGTTGGCTTCTTTTGGGCTCTCTTAGGAAGCACCCAGGCCTGTGTAGTCACCTCTGGCACTCTCATTCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557943.6
3UTR CCA 72 bp ATTGTGACACAAATCAGAAAGGGTTCACTAGTCAGCTaGGGAAGGGCCCCAGGCTGGTCACACAAAGGCACT +
Preference number: 3 (lower is better)
Translates to: IVTQIRKGSLVS*GRAPGWSHKGT
Trigger: AGTGCCTTTGTGTGACCAGCCTGGGGCCCTTCCCCAGCTGACTAGTGAACCCTTTCTGATTTGTGTCACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557943.6
3UTR-3UTR CAA 90 bp TGGCACTACCGCCACTTGTTGCTGCAGCATCAAAGGATGTTCCACGGACAGAAACACTACCGCCACTTGTaGCTGCAGCATCAAAGGATG +
Preference number: 3 (lower is better)
Translates to: WHYRHLLLQHQRMFHGQKHYRHL*LQHQRM
Trigger: CATCCTTTGATGCTGCAGCAACAAGTGGCGGTAGTG...TTTCTGTCCGTGGAACATCCTTTGATGCTGCAGCAACAAGTGGCGGTAGTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
3UTR-3UTR CAA 90 bp AGCCTCGACCACCAGATACCACCACTTTGGCACCTGTTAGCTCTGGTCGATCACCCACTGGTGAAGTACTaGATGCCTTTTCTGAACTGG +
Preference number: 3 (lower is better)
Translates to: SLDHQIPPLWHLLALVDHPLVKY*MPFLNW
Trigger: CCAGTTCAGAAAAGGCATCAAGTACTTCACCAGTGG...GTGATCGACCAGAGCTAACAGGTGCCAAAGTGGTGGTATCTGGTGGTCGAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
3UTR-3UTR CAA 90 bp CCTCAGCTGTGCCCTGGGCAGCAGAATGAGAGTGCCAGAGGTGACTACACAGGCTTTTTAACTCTGCACTaGCCAATTCAGTTACCTTCT +
Preference number: 3 (lower is better)
Translates to: PQLCPGQQNESARGDYTGFLTLH*PIQLPS
Trigger: AGAAGGTAACTGAATTGGCAAGTGCAGAGTTAAAAA...GCCTGTGTAGTCACCTCTGGCACTCTCATTCTGCTGCCCAGGGCACAGCTGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557943.6
3UTR-3UTR CAA 90 bp TTTTTCCCGTCTGTCCAACTTGCATGTCATTGGGAACAAAGCCAGCATCAACAGGGGGCAACCTCAAGTTaGGCTGCTACTCTGGGCAAA +
Preference number: 3 (lower is better)
Translates to: FFPSVQLACHWEQSQHQQGATSS*AATLGK
Trigger: TTTGCCCAGAGTAGCAGCCAAACTTGAGGTTGCCCC...CTGTTGATGCTGGCTTTGTTCCCAATGACATGCAAGTTGGACAGACGGGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
3UTR-3UTR CAA 90 bp GCAATGATGTCAGAAATCGGGGCAACCTCAAGTTTGGCTGCTACTCTGGGCAAAGCCACCTTGTCACATTaGGTTCCAGCTACTAAGCAG +
Preference number: 3 (lower is better)
Translates to: AMMSEIGATSSLAATLGKATLSH*VPATKQ
Trigger: CTGCTTAGTAGCTGGAACCAAATGTGACAAGGTGGC...TTTGCCCAGAGTAGCAGCCAAACTTGAGGTTGCCCCGATTTCTGACATCATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560044.5
3UTR GCA 72 bp TACTGTCTGCTTGATCCAGGTCACTACTCCTACTTCTaGAGATCTGATTCAGGAGGGCAGCCCTCTTTGTTC +
Preference number: 3 (lower is better)
Translates to: YCLLDPGHYSYF*RSDSGGQPSLF
Trigger: GAACAAAGAGGGCTGCCCTCCTGAATCAGATCTGCAGAAGTAGGAGTAGTGACCTGGATCAAGCAGACAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557943.6
3UTR-3UTR CAA 90 bp CTTGATGCCTTTTCTGAACTGGCACTACCGCCACTTGTTGCTGCAGCATCAAAGAGATCTTGTGCCACCTaGTCACATTTGGTTCCAGCT +
Preference number: 3 (lower is better)
Translates to: LDAFSELALPPLVAAASKRSCAT*SHLVPA
Trigger: AGCTGGAACCAAATGTGACAAGGTGGCACAAGATCT...CTTTGATGCTGCAGCAACAAGTGGCGGTAGTGCCAGTTCAGAAAAGGCATCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560044.5
3UTR-3UTR CAA 90 bp GCAACCTCAAGTTTGGCTGCTACTCTGGGCAAAAGGTTCTTTCCGAAGGCAGATGAGCCACCAGAACTTTaGCTATGCCTGCTACTTTAC +
Preference number: 3 (lower is better)
Translates to: ATSSLAATLGKRFFPKADEPPEL*LCLLLY
Trigger: GTAAAGTAGCAGGCATAGCAAAAGTTCTGGTGGCTC...ATCTGCCTTCGGAAAGAACCTTTTGCCCAGAGTAGCAGCCAAACTTGAGGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560044.5
3UTR-3UTR CAA 90 bp GAAATCGGGGCAACCTCAAGTTTGGCTGCTACTCTGGGCAAAAGGTTCTTTCCGTTCCTCTTGTCACATTaGGTTCCAGCTACTAAGCAG +
Preference number: 3 (lower is better)
Translates to: EIGATSSLAATLGKRFFPFLLSH*VPATKQ
Trigger: CTGCTTAGTAGCTGGAACCAAATGTGACAAGAGGAA...CGGAAAGAACCTTTTGCCCAGAGTAGCAGCCAAACTTGAGGTTGCCCCGATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560309.5
3UTR GCA 72 bp AATGATGTCAGAAATCGGGGCAACCTCAAGTTTGGCTaGTACTCTGGGCAAAAGGTTCTTTCCGAAGGCAGA +
Preference number: 3 (lower is better)
Translates to: NDVRNRGNLKFG*YSGQKVLSEGR
Trigger: TCTGCCTTCGGAAAGAACCTTTTGCCCAGAGTAGCAGCCAAACTTGAGGTTGCCCCGATTTCTGACATCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267950.12
ENST00000560044.5
ENST00000560309.5
3UTR CCA 72 bp CACTCTTCAAGCCTCGACCACCAGATACCACCACTTTaGCACCTGTTAGCTCTGGTCGATCACTTTTTGTTA +
Preference number: 3 (lower is better)
Translates to: HSSSLDHQIPPL*HLLALVDHFLL
Trigger: TAACAAAAAGTGATCGACCAGAGCTAACAGGTGCCAAAGTGGTGGTATCTGGTGGTCGAGGCTTGAAGAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
3UTR CCA 72 bp CTACTATTTTTCCCGTCTGTCCAACTTGCATGTCATTaGGAACAAAGCCAGCATCAACAGCAGCACGGGAAG +
Preference number: 3 (lower is better)
Translates to: LLFFPSVQLACH*EQSQHQQQHGK
Trigger: CTTCCCGTGCTGCTGTTGATGCTGGCTTTGTTCCCAATGACATGCAAGTTGGACAGACGGGAAAAATAGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
3UTR-3UTR CAA 90 bp TGGCACCTGTTAGCTCTGGTCGATCACTTTTTGTTAATTTCTGGTCAAGCCACTCACTACCGCCACTTGTaGCTGCAGCATCAAAGGATG +
Preference number: 3 (lower is better)
Translates to: WHLLALVDHFLLISGQATHYRHL*LQHQRM
Trigger: CATCCTTTGATGCTGCAGCAACAAGTGGCGGTAGTG...AGTGGCTTGACCAGAAATTAACAAAAAGTGATCGACCAGAGCTAACAGGTGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
3UTR-3UTR CAA 90 bp GCCTTTTCTGAACTGGCACTACCGCCACTTGTTGCTGCAGCATCAAAGGATGTTGTGCTAGGGAATCATTaGCATGCTCAGCTATTACCA +
Preference number: 3 (lower is better)
Translates to: AFSELALPPLVAAASKDVVLGNH*HAQLLP
Trigger: TGGTAATAGCTGAGCATGCAAATGATTCCCTAGCAC...AACATCCTTTGATGCTGCAGCAACAAGTGGCGGTAGTGCCAGTTCAGAAAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560044.5
3UTR-3UTR CAA 90 bp GCAACCTCAAGTTTGGCTGCTACTCTGGGCAAAAGGTTCTTTCCGAAGGCAGATGTGCTAGGGAATCATTaGCATGCTCAGCTATTACCA +
Preference number: 3 (lower is better)
Translates to: ATSSLAATLGKRFFPKADVLGNH*HAQLLP
Trigger: TGGTAATAGCTGAGCATGCAAATGATTCCCTAGCAC...ATCTGCCTTCGGAAAGAACCTTTTGCCCAGAGTAGCAGCCAAACTTGAGGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560044.5
ENST00000560309.5
3UTR-3UTR CAA 90 bp CTCAAGTTTGGCTGCTACTCTGGGCAAAAGGTTCTTTCCGAAGGCAGATGCTCCAATGTGTCAGGTGACTaGATTGCAATGATGTCAGAA +
Preference number: 3 (lower is better)
Translates to: LKFGCYSGQKVLSEGRCSNVSGD*IAMMSE
Trigger: TTCTGACATCATTGCAATCAAGTCACCTGACACATT...GGAGCATCTGCCTTCGGAAAGAACCTTTTGCCCAGAGTAGCAGCCAAACTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267950.12
ENST00000560044.5
ENST00000560309.5
3UTR GCA 72 bp TGCTACTCTGGGCAAAAGGTTCTTTCCGAAGGCAGATaGTCCAGCACAGATGTGTGTGTAATTGAACTGCTT +
Preference number: 3 (lower is better)
Translates to: CYSGQKVLSEGR*SSTDVCVIELL
Trigger: AAGCAGTTCAATTACACACACATCTGTGCTGGAGCATCTGCCTTCGGAAAGAACCTTTTGCCCAGAGTAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267950.12
ENST00000560044.5
ENST00000560309.5
3UTR GCA 72 bp CACATCATGCTGAGCCACCAGAACTTTTGCTATGCCTaGTACTTTACAGAGATCTTGTGCCACCTTGTCACA +
Preference number: 3 (lower is better)
Translates to: HIMLSHQNFCYA*YFTEILCHLVT
Trigger: TGTGACAAGGTGGCACAAGATCTCTGTAAAGTAGCAGGCATAGCAAAAGTTCTGGTGGCTCAGCATGATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560044.5
3UTR-3UTR CAA 90 bp CTTCTCTTCCCTACTGTCTGCTTGATCCAGGTCACTACTCCTACTTCTGCAGATAATGAGATTAGTAGGTaGATTAGGCTGGTGGAGACA +
Preference number: 3 (lower is better)
Translates to: LLFPTVCLIQVTTPTSADNEISR*IRLVET
Trigger: TGTCTCCACCAGCCTAATCAACCTACTAATCTCATT...ATCTGCAGAAGTAGGAGTAGTGACCTGGATCAAGCAGACAGTAGGGAAGAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557943.6
3UTR TCA 72 bp AGTTCCTCTGGAAGTAGGCCTTTGTACACATCATGCTaGGCCACCAGAACTTTTGCTATGCCTGCTACTTTA +
Preference number: 3 (lower is better)
Translates to: SSSGSRPLYTSC*ATRTFAMPATL
Trigger: TAAAGTAGCAGGCATAGCAAAAGTTCTGGTGGCTCAGCATGATGTGTACAAAGGCCTACTTCCAGAGGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560044.5
3UTR GCA 72 bp AGTTCTGGTGCTACTATTTTTCCCGTCTGTCCAACTTaGATGTCATTGGGAACAAAGCCAGCATCAACAGCA +
Preference number: 3 (lower is better)
Translates to: SSGATIFPVCPT*MSLGTKPASTA
Trigger: TGCTGTTGATGCTGGCTTTGTTCCCAATGACATGCAAGTTGGACAGACGGGAAAAATAGTAGCACCAGAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
3UTR-3UTR CAA 90 bp CTTTTTGTTAATTTCTGGTCAAGCCACTCTGATATTTCCACTGGTGAAGTACTTGGGGCAACCTCAAGTTaGGCTGCTACTCTGGGCAAA +
Preference number: 3 (lower is better)
Translates to: LFVNFWSSHSDISTGEVLGATSS*AATLGK
Trigger: TTTGCCCAGAGTAGCAGCCAAACTTGAGGTTGCCCC...AAGTACTTCACCAGTGGAAATATCAGAGTGGCTTGACCAGAAATTAACAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
3UTR-3UTR CAA 90 bp TCCGAAGGCAGATGCTCCAGCACAGATGTGTGTGTAATTGAACTGCTTCTGAGTAATGTGTCAGGTGACTaGATTGCAATGATGTCAGAA +
Preference number: 3 (lower is better)
Translates to: SEGRCSSTDVCVIELLLSNVSGD*IAMMSE
Trigger: TTCTGACATCATTGCAATCAAGTCACCTGACACATT...ACTCAGAAGCAGTTCAATTACACACACATCTGTGCTGGAGCATCTGCCTTCGGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267950.12
ENST00000560044.5
ENST00000560309.5
3UTR-3UTR CAA 90 bp AATATAAAGTTCTGGTGCTACTATTTTTCCCGTCTGTCCAACTTGCATGTCATTTGGCACTACCGCCACTaGTTGCTGCAGCATCAAAGG +
Preference number: 3 (lower is better)
Translates to: NIKFWCYYFSRLSNLHVIWHYRH*LLQHQR
Trigger: CCTTTGATGCTGCAGCAACAAGTGGCGGTAGTGCCA...AATGACATGCAAGTTGGACAGACGGGAAAAATAGTAGCACCAGAACTTTATATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
3UTR TCA 72 bp ACAGCAGCACGGGAAGCACCAACTGCAGCATGTAGTTaGTCTGCCAAGTCATATAACAACTTAAAGTTCTCT +
Preference number: 3 (lower is better)
Translates to: TAAREAPTAACS*SAKSYNNLKFS
Trigger: AGAGAACTTTAAGTTGTTATATGACTTGGCAGATCAACTACATGCTGCAGTTGGTGCTTCCCGTGCTGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
3UTR GCA 72 bp AGCACAGATGTGTGTGTAATTGAACTGCTTCTGAGTTaGCAAAATCAATGGTGTCAGTTCCTCTTGTCACAT +
Preference number: 3 (lower is better)
Translates to: STDVCVIELLLS*QNQWCQFLLSH
Trigger: ATGTGACAAGAGGAACTGACACCATTGATTTTGGCAACTCAGAAGCAGTTCAATTACACACACATCTGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560309.5
3UTR CCA 72 bp CCTGTTAGCTCTGGTCGATCACTTTTTGTTAATTTCTaGTCAAGCCACTCTGATATTTCCACTGGTGAAGTA +
Preference number: 3 (lower is better)
Translates to: PVSSGRSLFVNF*SSHSDISTGEV
Trigger: TACTTCACCAGTGGAAATATCAGAGTGGCTTGACCAGAAATTAACAAAAAGTGATCGACCAGAGCTAACAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
3UTR TCA 72 bp ATTTCCTGCATAAATAGTTCTCACAAATGTGTCAGGTaGCTTGATTGCAATGATGTCAGAAATCGGGGCAAC +
Preference number: 3 (lower is better)
Translates to: ISCINSSHKCVR*LDCNDVRNRGN
Trigger: GTTGCCCCGATTTCTGACATCATTGCAATCAAGTCACCTGACACATTTGTGAGAACTATTTATGCAGGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267950.12
ENST00000560044.5
ENST00000560309.5
3UTR CCA 72 bp TATTCCATAATCTGCCACTTGGAAAATTGGAGCTTCTaGGTCTTTATTAATTGCCACAATTGTCTTGCTGTC +
Preference number: 3 (lower is better)
Translates to: YSIICHLENWSF*VFINCHNCLAV
Trigger: GACAGCAAGACAATTGTGGCAATTAATAAAGACCCAGAAGCTCCAATTTTCCAAGTGGCAGATTATGGAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267950.12
3UTR CCA 72 bp TATTCCATAATCTGCCACTTGGAAAATTGGAGCTTCTaGGTCTTTATTAATTGCCACAATTGTCTGGCATTG +
Preference number: 3 (lower is better)
Translates to: YSIICHLENWSF*VFINCHNCLAL
Trigger: CAATGCCAGACAATTGTGGCAATTAATAAAGACCCAGAAGCTCCAATTTTCCAAGTGGCAGATTATGGAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565910.5
3UTR TCA 72 bp TATGAAGTTTGCCCTTCAACAATGAGATTAGTAGGTTaGTTAGGCTGGTGGAGACAATCATGTTTACAATCT +
Preference number: 3 (lower is better)
Translates to: YEVCPSTMRLVG*LGWWRQSCLQS
Trigger: AGATTGTAAACATGATTGTCTCCACCAGCCTAATCAACCTACTAATCTCATTGTTGAAGGGCAAACTTCATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433983.6
ENST00000557943.6
CDS-3UTR GCA 90 bp AGGGCAGCCCTCTTTGTTCTACTCACCTACCTACCCACGCCTTCCTGCAGGCCTCTTACAGCAGCCCCGTaGCCGGCCAACTGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: RAALFVLLTYLPTPSCRPLTAAP*PANWRR
Trigger: GCGGCGCCAGTTGGCCGGGCACGGGGCTGCTGTAAG...AGGCCTGCAGGAAGGCGTGGGTAGGTAGGTGAGTAGAACAAAGAGGGCTGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS-3UTR CCA 90 bp CATTGGGAACAAAGCCAGCATCAACAGCAGCACGGGAAGCACCAACTGCAGCATCCGTGCCCGGCCAACTaGCGCCGCCTCAGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: HWEQSQHQQQHGKHQLQHPCPAN*RRLSQS
Trigger: TGACTGGCTGAGGCGGCGCCAGTTGGCCGGGCACGG...ATGCTGCAGTTGGTGCTTCCCGTGCTGCTGTTGATGCTGGCTTTGTTCCCAATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560044.5
CDS-3UTR GCA 90 bp TGGCACTACCGCCACTTGTTGCTGCAGCATCAAAGGATGTTCCACGGACAGAAACTTACAGCAGCCCCGTaGCCGGCCAACTGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: WHYRHLLLQHQRMFHGQKLTAAP*PANWRR
Trigger: GCGGCGCCAGTTGGCCGGGCACGGGGCTGCTGTAAG...TTTCTGTCCGTGGAACATCCTTTGATGCTGCAGCAACAAGTGGCGGTAGTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560044.5
CDS-3UTR GCA 90 bp AGGGCAGCCCTCTTTGTTCTACTCACCTACCTACCCACGCCTTCCTGCAGGCCTAGCCTCACCAGCCTCTaGTCTTGGGCCTGCATCCAC +
Preference number: 4 (lower is better)
Translates to: RAALFVLLTYLPTPSCRPSLTSL*SWACIH
Trigger: GTGGATGCAGGCCCAAGAGCAGAGGCTGGTGAGGCT...AGGCCTGCAGGAAGGCGTGGGTAGGTAGGTGAGTAGAACAAAGAGGGCTGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS-3UTR GCA 90 bp CCTCAGCTGTGCCCTGGGCAGCAGAATGAGAGTGCCAGAGGTGACTACACAGGCCTACACAGGCCTGGGTaGTTCCTAAGAGAGCCCAAA +
Preference number: 4 (lower is better)
Translates to: PQLCPGQQNESARGDYTGLHRPG*FLREPK
Trigger: TTTGGGCTCTCTTAGGAAGCACCCAGGCCTGTGTAG...GCCTGTGTAGTCACCTCTGGCACTCTCATTCTGCTGCCCAGGGCACAGCTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS-3UTR GCA 90 bp CCTCAGCTGTGCCCTGGGCAGCAGAATGAGAGTGCCAGAGGTGACTACACAGGCCTTTCCGAAGGCAGATaGTCCAGCACAGATGTGTGT +
Preference number: 4 (lower is better)
Translates to: PQLCPGQQNESARGDYTGLSEGR*SSTDVC
Trigger: ACACACATCTGTGCTGGAGCATCTGCCTTCGGAAAG...GCCTGTGTAGTCACCTCTGGCACTCTCATTCTGCTGCCCAGGGCACAGCTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS-3UTR CCA 90 bp TGCAATGATGTCAGAAATCGGGGCAACCTCAAGTTTGGCTGCTACTCTGGGCAACCGCCGCTCGGAACATaGTCTCCGCTTCCGCCGCAA +
Preference number: 4 (lower is better)
Translates to: CNDVRNRGNLKFGCYSGQPPLGT*SPLPPQ
Trigger: TTGCGGCGGAAGCGGAGACCATGTTCCGAGCGGCGG...TTGCCCAGAGTAGCAGCCAAACTTGAGGTTGCCCCGATTTCTGACATCATTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267950.12
ENST00000560044.5
ENST00000560309.5
CDS-3UTR CCA 90 bp GCAACCTCAAGTTTGGCTGCTACTCTGGGCAAAAGGTTCTTTCCGAAGGCAGATCCGCCGCTCGGAACATaGTCTCCGCTTCCGCCGCAA +
Preference number: 4 (lower is better)
Translates to: ATSSLAATLGKRFFPKADPPLGT*SPLPPQ
Trigger: TTGCGGCGGAAGCGGAGACCATGTTCCGAGCGGCGG...ATCTGCCTTCGGAAAGAACCTTTTGCCCAGAGTAGCAGCCAAACTTGAGGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267950.12
ENST00000560044.5
ENST00000560309.5
CDS-3UTR CCA 90 bp GATGTCAGAAATCGGGGCAACCTCAAGTTTGGCTGCTACTCTGGGCAAAAGGTTCCGCCGCTCGGAACATaGTCTCCGCTTCCGCCGCAA +
Preference number: 4 (lower is better)
Translates to: DVRNRGNLKFGCYSGQKVPPLGT*SPLPPQ
Trigger: TTGCGGCGGAAGCGGAGACCATGTTCCGAGCGGCGG...AACCTTTTGCCCAGAGTAGCAGCCAAACTTGAGGTTGCCCCGATTTCTGACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267950.12
ENST00000560044.5
ENST00000560309.5
CDS-3UTR TCA 90 bp CCTCAGCTGTGCCCTGGGCAGCAGAATGAGAGTGCCAGAGGTGACTACACAGGCATTACCAGGGTACTCTaGAATCGTAGCAATGAGGCC +
Preference number: 4 (lower is better)
Translates to: PQLCPGQQNESARGDYTGITRVL*NRSNEA
Trigger: GGCCTCATTGCTACGATTTCAGAGTACCCTGGTAAT...GCCTGTGTAGTCACCTCTGGCACTCTCATTCTGCTGCCCAGGGCACAGCTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS-3UTR CCA 90 bp AGGGCAGCCCTCTTTGTTCTACTCACCTACCTACCCACGCCTTCCTGCAGGCCTCAGATACCACCACTTTaGCACCTGTTAGCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: RAALFVLLTYLPTPSCRPQIPPL*HLLALV
Trigger: GACCAGAGCTAACAGGTGCCAAAGTGGTGGTATCTG...AGGCCTGCAGGAAGGCGTGGGTAGGTAGGTGAGTAGAACAAAGAGGGCTGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS-3UTR GCA 90 bp GGCAGCCCTCTTTGTTCTACTCACCTACCTACCCACGCCTTCCTGCAGGCCTGTACTACCGCCACTTGTTaGTGCAGCATCAAAGGATGT +
Preference number: 4 (lower is better)
Translates to: GSPLCSTHLPTHAFLQACTTATC*CSIKGC
Trigger: ACATCCTTTGATGCTGCAGCAACAAGTGGCGGTAGT...ACAGGCCTGCAGGAAGGCGTGGGTAGGTAGGTGAGTAGAACAAAGAGGGCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS-3UTR CCA 90 bp GGCAGCCCTCTTTGTTCTACTCACCTACCTACCCACGCCTTCCTGCAGGCCTGTCCACCTTGTCACATTTaGTTCCAGCTACTAAGCAGG +
Preference number: 4 (lower is better)
Translates to: GSPLCSTHLPTHAFLQACPPCHI*FQLLSR
Trigger: CCTGCTTAGTAGCTGGAACCAAATGTGACAAGGTGG...ACAGGCCTGCAGGAAGGCGTGGGTAGGTAGGTGAGTAGAACAAAGAGGGCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS-3UTR TCA 90 bp CTTCCCTACTGTCTGCTTGATCCAGGTCACTACTCCTACTTCTGCAGATCTGATCAGCTGCAGCCCTGGTaGCACTCTTGGACCTCAGCT +
Preference number: 4 (lower is better)
Translates to: LPYCLLDPGHYSYFCRSDQLQPW*HSWTSA
Trigger: AGCTGAGGTCCAAGAGTGTCACCAGGGCTGCAGCTG...ATCAGATCTGCAGAAGTAGGAGTAGTGACCTGGATCAAGCAGACAGTAGGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS-3UTR CCA 90 bp CCTCAGCTGTGCCCTGGGCAGCAGAATGAGAGTGCCAGAGGTGACTACACAGGCAGTTGCCAAAATCAATaGTGTCAGTTCCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: PQLCPGQQNESARGDYTGSCQNQ*CQFLWK
Trigger: CTTCCAGAGGAACTGACACCATTGATTTTGGCAACT...GCCTGTGTAGTCACCTCTGGCACTCTCATTCTGCTGCCCAGGGCACAGCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS-3UTR CCA 90 bp CCTCAGCTGTGCCCTGGGCAGCAGAATGAGAGTGCCAGAGGTGACTACACAGGCAGCCAACTAAATACATaGAGCTGGGTCAGGTTTAAG +
Preference number: 4 (lower is better)
Translates to: PQLCPGQQNESARGDYTGSQLNT*SWVRFK
Trigger: CTTAAACCTGACCCAGCTCCATGTATTTAGTTGGCT...GCCTGTGTAGTCACCTCTGGCACTCTCATTCTGCTGCCCAGGGCACAGCTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS-3UTR GCA 90 bp CATGTCATTGGGAACAAAGCCAGCATCAACAGCAGCACGGGAAGCACCAACTGCACCGCCACTTGTTGCTaGAGCATCAAAGGATGTTCC +
Preference number: 4 (lower is better)
Translates to: HVIGNKASINSSTGSTNCTATCC*SIKGCS
Trigger: GGAACATCCTTTGATGCTGCAGCAACAAGTGGCGGT...GCAGTTGGTGCTTCCCGTGCTGCTGTTGATGCTGGCTTTGTTCCCAATGACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
CDS-3UTR CCA 90 bp GTGCAGAAGATGCCAGAATGTCTAAGATTGGAACATGGTATAGTCCAGGTAACTCCGCCGCTCGGAACATaGTCTCCGCTTCCGCCGCAA +
Preference number: 4 (lower is better)
Translates to: VQKMPECLRLEHGIVQVTPPLGT*SPLPPQ
Trigger: TTGCGGCGGAAGCGGAGACCATGTTCCGAGCGGCGG...AGTTACCTGGACTATACCATGTTCCAATCTTAGACATTCTGGCATCTTCTGCAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560899.5
CDS-3UTR CCA 90 bp GGCAGCCCTCTTTGTTCTACTCACCTACCTACCCACGCCTTCCTGCAGGCCTGTATCCCAGCTAAATGTTaGATGGCTCCAGATATTCCA +
Preference number: 4 (lower is better)
Translates to: GSPLCSTHLPTHAFLQACIPAKC*MAPDIP
Trigger: TGGAATATCTGGAGCCATCCAACATTTAGCTGGGAT...ACAGGCCTGCAGGAAGGCGTGGGTAGGTAGGTGAGTAGAACAAAGAGGGCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS-3UTR CCA 90 bp GATGTCAGAAATCGGGGCAACCTCAAGTTTGGCTGCTACTCTGGGCAAAAGGTTAGTTCGAGACCAGCCTaGGTAACATGGGGAAACCCC +
Preference number: 4 (lower is better)
Translates to: DVRNRGNLKFGCYSGQKVSSRPA*VTWGNP
Trigger: GGGGTTTCCCCATGTTACCCAGGCTGGTCTCGAACT...AACCTTTTGCCCAGAGTAGCAGCCAAACTTGAGGTTGCCCCGATTTCTGACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000560044.5
ENST00000560309.5
CDS-3UTR CCA 90 bp CTCAAGTTTGGCTGCTACTCTGGGCAAAAGGTTCTTTCCGAAGGCAGATGCTCCGGGCAACCTCAAGTTTaGCTGCTACTCTGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: LKFGCYSGQKVLSEGRCSGQPQV*LLLWAK
Trigger: TTTTGCCCAGAGTAGCAGCCAAACTTGAGGTTGCCC...GGAGCATCTGCCTTCGGAAAGAACCTTTTGCCCAGAGTAGCAGCCAAACTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267950.12
ENST00000560044.5
ENST00000560309.5
CDS-3UTR CCA 90 bp TGCATGTCATTGGGAACAAAGCCAGCATCAACAGCAGCACGGGAAGCACCAACTCAGATACCACCACTTTaGCACCTGTTAGCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: CMSLGTKPASTAAREAPTQIPPL*HLLALV
Trigger: GACCAGAGCTAACAGGTGCCAAAGTGGTGGTATCTG...AGTTGGTGCTTCCCGTGCTGCTGTTGATGCTGGCTTTGTTCCCAATGACATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
CDS-3UTR CCA 90 bp AGTAGGTTGATTAGGCTGGTGGAGACAATCATGTTTACAATCTTCCTAAAACATCCGTGCCCGGCCAACTaGCGCCGCCTCAGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: SRLIRLVETIMFTIFLKHPCPAN*RRLSQS
Trigger: TGACTGGCTGAGGCGGCGCCAGTTGGCCGGGCACGG...ATGTTTTAGGAAGATTGTAAACATGATTGTCTCCACCAGCCTAATCAACCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS-3UTR CCA 90 bp GAAGGCAGATGCTCCAGCACAGATGTGTGTGTAATTGAACTGCTTCTGAGTTGCAGTTCGAGACCAGCCTaGGTAACATGGGGAAACCCC +
Preference number: 4 (lower is better)
Translates to: EGRCSSTDVCVIELLLSCSSRPA*VTWGNP
Trigger: GGGGTTTCCCCATGTTACCCAGGCTGGTCTCGAACT...GCAACTCAGAAGCAGTTCAATTACACACACATCTGTGCTGGAGCATCTGCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560044.5
ENST00000560309.5
CDS-3UTR TCA 90 bp GAAATCGGGGCAACCTCAAGTTTGGCTGCTACTCTGGGCAAAAGGTTCTTTCCGATTACCAGGGTACTCTaGAATCGTAGCAATGAGGCC +
Preference number: 4 (lower is better)
Translates to: EIGATSSLAATLGKRFFPITRVL*NRSNEA
Trigger: GGCCTCATTGCTACGATTTCAGAGTACCCTGGTAAT...CGGAAAGAACCTTTTGCCCAGAGTAGCAGCCAAACTTGAGGTTGCCCCGATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000267950.12
CDS-3UTR TCA 90 bp TTCCCTTCTCTTCCCTACTGTCTGCTTGATCCAGGTCACTACTCCTACTTCTGCTCCCTACTGTCTGCTTaGTCCAGGTCACTACTCCTA +
Preference number: 4 (lower is better)
Translates to: FPSLPYCLLDPGHYSYFCSLLSA*SRSLLL
Trigger: TAGGAGTAGTGACCTGGATCAAGCAGACAGTAGGGA...GCAGAAGTAGGAGTAGTGACCTGGATCAAGCAGACAGTAGGGAAGAGAAGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS-3UTR GCA 90 bp GAAATCGGGGCAACCTCAAGTTTGGCTGCTACTCTGGGCAAAAGGTTCTTTCCGCCCGTCTGTCCAACTTaGATGTCATTGGGAACAAAG +
Preference number: 4 (lower is better)
Translates to: EIGATSSLAATLGKRFFPPVCPT*MSLGTK
Trigger: CTTTGTTCCCAATGACATGCAAGTTGGACAGACGGG...CGGAAAGAACCTTTTGCCCAGAGTAGCAGCCAAACTTGAGGTTGCCCCGATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
CDS-3UTR GCA 90 bp ACTTGCATGTCATTGGGAACAAAGCCAGCATCAACAGCAGCACGGGAAGCACCACCCGTCTGTCCAACTTaGATGTCATTGGGAACAAAG +
Preference number: 4 (lower is better)
Translates to: TCMSLGTKPASTAAREAPPVCPT*MSLGTK
Trigger: CTTTGTTCCCAATGACATGCAAGTTGGACAGACGGG...TGGTGCTTCCCGTGCTGCTGTTGATGCTGGCTTTGTTCCCAATGACATGCAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
CDS-3UTR GCA 90 bp AGGGCAGCCCTCTTTGTTCTACTCACCTACCTACCCACGCCTTCCTGCAGGCCTAACTATTCCATAATCTaGCACTTGGAAAATTGGAGC +
Preference number: 4 (lower is better)
Translates to: RAALFVLLTYLPTPSCRPNYSII*HLENWS
Trigger: GCTCCAATTTTCCAAGTGGCAGATTATGGAATAGTT...AGGCCTGCAGGAAGGCGTGGGTAGGTAGGTGAGTAGAACAAAGAGGGCTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS-3UTR CCA 90 bp AAATTTACCTTAAGCCAACTAAATACATGGAGCTGGGTCAGGTTTAAGTCAGGTCCGCCGCTCGGAACATaGTCTCCGCTTCCGCCGCAA +
Preference number: 4 (lower is better)
Translates to: KFTLSQLNTWSWVRFKSGPPLGT*SPLPPQ
Trigger: TTGCGGCGGAAGCGGAGACCATGTTCCGAGCGGCGG...ACCTGACTTAAACCTGACCCAGCTCCATGTATTTAGTTGGCTTAAGGTAAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS-3UTR CCA 90 bp GTCTGTCCAACTTGCATGTCATTGGGAACAAAGCCAGCATCAACAGCAGCACGGGTTTGGCTGCTACTCTaGGCAAAAGGTTCTTTCCGA +
Preference number: 4 (lower is better)
Translates to: VCPTCMSLGTKPASTAARVWLLL*AKGSFR
Trigger: TCGGAAAGAACCTTTTGCCCAGAGTAGCAGCCAAAC...CCGTGCTGCTGTTGATGCTGGCTTTGTTCCCAATGACATGCAAGTTGGACAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
3UTR CAA 72 bp TACTTGATGCCTTTTCTGAACTGGCACTACCGCCACTaGTTGCTGCAGCATCAAAGGATGTTCCACGGACAG +
Preference number: 4 (lower is better)
Translates to: YLMPFLNWHYRH*LLQHQRMFHGQ
Trigger: CTGTCCGTGGAACATCCTTTGATGCTGCAGCAACAAGTGGCGGTAGTGCCAGTTCAGAAAAGGCATCAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
3UTR CAA 72 bp CCACTCTTCAAGCCTCGACCACCAGATACCACCACTTaGGCACCTGTTAGCTCTGGTCGATCACTTTTTGTT +
Preference number: 4 (lower is better)
Translates to: PLFKPRPPDTTT*APVSSGRSLFV
Trigger: AACAAAAAGTGATCGACCAGAGCTAACAGGTGCCAAAGTGGTGGTATCTGGTGGTCGAGGCTTGAAGAGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
CDS-3UTR TCA 90 bp AAGCCTCGACCACCAGATACCACCACTTTGGCACCTGTTAGCTCTGGTCGATCAACTGCAGCATGTAGTTaGTCTGCCAAGTCATATAAC +
Preference number: 4 (lower is better)
Translates to: KPRPPDTTTLAPVSSGRSTAACS*SAKSYN
Trigger: GTTATATGACTTGGCAGATCAACTACATGCTGCAGT...TGATCGACCAGAGCTAACAGGTGCCAAAGTGGTGGTATCTGGTGGTCGAGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
CDS-3UTR GCA 90 bp GGCAGATGCTCCAGCACAGATGTGTGTGTAATTGAACTGCTTCTGAGTTGCCAACTTTCCGAAGGCAGATaGTCCAGCACAGATGTGTGT +
Preference number: 4 (lower is better)
Translates to: GRCSSTDVCVIELLLSCQLSEGR*SSTDVC
Trigger: ACACACATCTGTGCTGGAGCATCTGCCTTCGGAAAG...TTGGCAACTCAGAAGCAGTTCAATTACACACACATCTGTGCTGGAGCATCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267950.12
ENST00000560044.5
ENST00000560309.5
CDS-3UTR GCA 90 bp CAGAAATCGGGGCAACCTCAAGTTTGGCTGCTACTCTGGGCAAAAGGTTCTTTCACTACCGCCACTTGTTaGTGCAGCATCAAAGGATGT +
Preference number: 4 (lower is better)
Translates to: QKSGQPQVWLLLWAKGSFTTATC*CSIKGC
Trigger: ACATCCTTTGATGCTGCAGCAACAAGTGGCGGTAGT...GAAAGAACCTTTTGCCCAGAGTAGCAGCCAAACTTGAGGTTGCCCCGATTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
CDS-3UTR GCA 90 bp AGGGCAGCCCTCTTTGTTCTACTCACCTACCTACCCACGCCTTCCTGCAGGCCTAATATAAAGTTCTGGTaGTACTATTTTTCCCGTCTG +
Preference number: 4 (lower is better)
Translates to: RAALFVLLTYLPTPSCRPNIKFW*YYFSRL
Trigger: CAGACGGGAAAAATAGTAGCACCAGAACTTTATATT...AGGCCTGCAGGAAGGCGTGGGTAGGTAGGTGAGTAGAACAAAGAGGGCTGCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS-3UTR GCA 90 bp GGCAGCCCTCTTTGTTCTACTCACCTACCTACCCACGCCTTCCTGCAGGCCTGTTTCTCCTATGAAGTTTaGCCTTCAACAATGAGATTA +
Preference number: 4 (lower is better)
Translates to: GSPLCSTHLPTHAFLQACFSYEV*PSTMRL
Trigger: TAATCTCATTGTTGAAGGGCAAACTTCATAGGAGAA...ACAGGCCTGCAGGAAGGCGTGGGTAGGTAGGTGAGTAGAACAAAGAGGGCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS-3UTR CCA 90 bp CTCAAGTTTGGCTGCTACTCTGGGCAAAAGGTTCTTTCCGAAGGCAGATGCTCCTCCTCTTGTCACATTTaGTTCCAGCTACTAAGCAGG +
Preference number: 4 (lower is better)
Translates to: LKFGCYSGQKVLSEGRCSSSCHI*FQLLSR
Trigger: CCTGCTTAGTAGCTGGAACCAAATGTGACAAGAGGA...GGAGCATCTGCCTTCGGAAAGAACCTTTTGCCCAGAGTAGCAGCCAAACTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560309.5
CDS-3UTR CCA 90 bp CTTTCCGAAGGCAGATGCTCCAGCACAGATGTGTGTGTAATTGAACTGCTTCTGGGGCAACCTCAAGTTTaGCTGCTACTCTGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: LSEGRCSSTDVCVIELLLGQPQV*LLLWAK
Trigger: TTTTGCCCAGAGTAGCAGCCAAACTTGAGGTTGCCC...CAGAAGCAGTTCAATTACACACACATCTGTGCTGGAGCATCTGCCTTCGGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267950.12
ENST00000560044.5
ENST00000560309.5
CDS-3UTR CCA 90 bp CATGTCATTGGGAACAAAGCCAGCATCAACAGCAGCACGGGAAGCACCAACTGCCAACTTGCATGTCATTaGGAACAAAGCCAGCATCAA +
Preference number: 4 (lower is better)
Translates to: HVIGNKASINSSTGSTNCQLACH*EQSQHQ
Trigger: TTGATGCTGGCTTTGTTCCCAATGACATGCAAGTTG...GCAGTTGGTGCTTCCCGTGCTGCTGTTGATGCTGGCTTTGTTCCCAATGACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
CDS-3UTR CCA 90 bp GCAACCTCAAGTTTGGCTGCTACTCTGGGCAAAAGGTTCTTTCCGAAGGCAGATCCACCTTGTCACATTTaGTTCCAGCTACTAAGCAGG +
Preference number: 4 (lower is better)
Translates to: ATSSLAATLGKRFFPKADPPCHI*FQLLSR
Trigger: CCTGCTTAGTAGCTGGAACCAAATGTGACAAGGTGG...ATCTGCCTTCGGAAAGAACCTTTTGCCCAGAGTAGCAGCCAAACTTGAGGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560044.5
3UTR CAA 72 bp TTGATGCCTTTTCTGAACTGGCACTACCGCCACTTGTaGCTGCAGCATCAAAGGATGTTCCACGGACAGAAA +
Preference number: 4 (lower is better)
Translates to: LMPFLNWHYRHL*LQHQRMFHGQK
Trigger: TTTCTGTCCGTGGAACATCCTTTGATGCTGCAGCAACAAGTGGCGGTAGTGCCAGTTCAGAAAAGGCATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
CDS-3UTR TCA 90 bp TTGCATGTCATTGGGAACAAAGCCAGCATCAACAGCAGCACGGGAAGCACCAACAGATGTGTGTGTAATTaGACTGCTTCTGAGTTGCCA +
Preference number: 4 (lower is better)
Translates to: LHVIGNKASINSSTGSTNRCVCN*TASELP
Trigger: TGGCAACTCAGAAGCAGTTCAATTACACACACATCT...GTTGGTGCTTCCCGTGCTGCTGTTGATGCTGGCTTTGTTCCCAATGACATGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
CDS-3UTR GCA 90 bp CAGGACACTTCACCTCCAAGGCGTGTGGCTGCAGTAATGGTATTTAAAGTAATGCTTTCCGAAGGCAGATaGTCCAGCACAGATGTGTGT +
Preference number: 4 (lower is better)
Translates to: QDTSPPRRVAAVMVFKVMLSEGR*SSTDVC
Trigger: ACACACATCTGTGCTGGAGCATCTGCCTTCGGAAAG...CATTACTTTAAATACCATTACTGCAGCCACACGCCTTGGAGGTGAAGTGTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560044.5
ENST00000560309.5
CDS-3UTR GCA 90 bp CAGAAATCGGGGCAACCTCAAGTTTGGCTGCTACTCTGGGCAAAAGGTTCTTTCAACCTCAAGTTTGGCTaGTACTCTGGGCAAAAGGTT +
Preference number: 4 (lower is better)
Translates to: QKSGQPQVWLLLWAKGSFNLKFG*YSGQKV
Trigger: AACCTTTTGCCCAGAGTAGCAGCCAAACTTGAGGTT...GAAAGAACCTTTTGCCCAGAGTAGCAGCCAAACTTGAGGTTGCCCCGATTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000267950.12
ENST00000560044.5
ENST00000560309.5
CDS-3UTR GCA 90 bp TTCCCTTCTCTTCCCTACTGTCTGCTTGATCCAGGTCACTACTCCTACTTCTGCAACCTCAAGTTTGGCTaGTACTCTGGGCAAAAGGTT +
Preference number: 4 (lower is better)
Translates to: FPSLPYCLLDPGHYSYFCNLKFG*YSGQKV
Trigger: AACCTTTTGCCCAGAGTAGCAGCCAAACTTGAGGTT...GCAGAAGTAGGAGTAGTGACCTGGATCAAGCAGACAGTAGGGAAGAGAAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS-3UTR GCA 90 bp AGGGGTTCCTCAGAGAGATGTGCAGAAGATGCCAGAATGTCTAAGATTGGAACAACCGCCACTTGTTGCTaGAGCATCAAAGGATGTTCC +
Preference number: 4 (lower is better)
Translates to: RGSSERCAEDARMSKIGTTATCC*SIKGCS
Trigger: GGAACATCCTTTGATGCTGCAGCAACAAGTGGCGGT...TGTTCCAATCTTAGACATTCTGGCATCTTCTGCACATCTCTCTGAGGAACCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560899.5
CDS-3UTR GCA 90 bp GGTGACTTGATTGCAATGATGTCAGAAATCGGGGCAACCTCAAGTTTGGCTGCTACTACCGCCACTTGTTaGTGCAGCATCAAAGGATGT +
Preference number: 4 (lower is better)
Translates to: GDLIAMMSEIGATSSLAATTATC*CSIKGC
Trigger: ACATCCTTTGATGCTGCAGCAACAAGTGGCGGTAGT...AGCAGCCAAACTTGAGGTTGCCCCGATTTCTGACATCATTGCAATCAAGTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
CDS-3UTR GCA 90 bp CTTCTCTTCCCTACTGTCTGCTTGATCCAGGTCACTACTCCTACTTCTGCAGATCCCGTCTGTCCAACTTaGATGTCATTGGGAACAAAG +
Preference number: 4 (lower is better)
Translates to: LLFPTVCLIQVTTPTSADPVCPT*MSLGTK
Trigger: CTTTGTTCCCAATGACATGCAAGTTGGACAGACGGG...ATCTGCAGAAGTAGGAGTAGTGACCTGGATCAAGCAGACAGTAGGGAAGAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS-3UTR GCA 90 bp CTTCCCTACTGTCTGCTTGATCCAGGTCACTACTCCTACTTCTGCAGATCTGATCACTACTCCTACTTCTaGAGATCTGATTCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: LPYCLLDPGHYSYFCRSDHYSYF*RSDSGG
Trigger: CCCTCCTGAATCAGATCTGCAGAAGTAGGAGTAGTG...ATCAGATCTGCAGAAGTAGGAGTAGTGACCTGGATCAAGCAGACAGTAGGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS-3UTR CCA 90 bp GCAACCTCAAGTTTGGCTGCTACTCTGGGCAAAAGGTTCTTTCCGAAGGCAGATTCCTCTTGTCACATTTaGTTCCAGCTACTAAGCAGG +
Preference number: 4 (lower is better)
Translates to: ATSSLAATLGKRFFPKADSSCHI*FQLLSR
Trigger: CCTGCTTAGTAGCTGGAACCAAATGTGACAAGAGGA...ATCTGCCTTCGGAAAGAACCTTTTGCCCAGAGTAGCAGCCAAACTTGAGGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560309.5
CDS-3UTR CCA 90 bp GGGGCAACCTCAAGTTTGGCTGCTACTCTGGGCAAAAGGTTCTTTCCGAAGGCAAGTTGCCAAAATCAATaGTGTCAGTTCCTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: GATSSLAATLGKRFFPKASCQNQ*CQFLLS
Trigger: TGACAAGAGGAACTGACACCATTGATTTTGGCAACT...TGCCTTCGGAAAGAACCTTTTGCCCAGAGTAGCAGCCAAACTTGAGGTTGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560309.5
CDS-3UTR CCA 90 bp TTGCCACAATTGTCTTGCTGTCTTTCATCCCAGCTAAATGTTGGATGGCTCCAGGGGCAACCTCAAGTTTaGCTGCTACTCTGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: LPQLSCCLSSQLNVGWLQGQPQV*LLLWAK
Trigger: TTTTGCCCAGAGTAGCAGCCAAACTTGAGGTTGCCC...CTGGAGCCATCCAACATTTAGCTGGGATGAAAGACAGCAAGACAATTGTGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267950.12
CDS-3UTR CCA 90 bp AGGGGTTCCTCAGAGAGATGTGCAGAAGATGCCAGAATGTCTAAGATTGGAACAGGGCAACCTCAAGTTTaGCTGCTACTCTGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: RGSSERCAEDARMSKIGTGQPQV*LLLWAK
Trigger: TTTTGCCCAGAGTAGCAGCCAAACTTGAGGTTGCCC...TGTTCCAATCTTAGACATTCTGGCATCTTCTGCACATCTCTCTGAGGAACCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560899.5
CDS-3UTR CCA 90 bp AGGGGTTCCTCAGAGAGATGTGCAGAAGATGCCAGAATGTCTAAGATTGGAACACAGATACCACCACTTTaGCACCTGTTAGCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: RGSSERCAEDARMSKIGTQIPPL*HLLALV
Trigger: GACCAGAGCTAACAGGTGCCAAAGTGGTGGTATCTG...TGTTCCAATCTTAGACATTCTGGCATCTTCTGCACATCTCTCTGAGGAACCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560899.5
CDS-3UTR CCA 90 bp TTCAACAATGAGATTAGTAGGTTGATTAGGCTGGTGGAGACAATCATGTTTACAGGTTCACTAGTCAGCTaGGGAAGGGCCCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: FNNEISRLIRLVETIMFTGSLVS*GRAPGW
Trigger: CCAGCCTGGGGCCCTTCCCCAGCTGACTAGTGAACC...TGTAAACATGATTGTCTCCACCAGCCTAATCAACCTACTAATCTCATTGTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS-3UTR TCA 90 bp CACTACCGCCACTTGTTGCTGCAGCATCAAAGGATGTTCCACGGACAGAAAACAACTGCAGCATGTAGTTaGTCTGCCAAGTCATATAAC +
Preference number: 4 (lower is better)
Translates to: HYRHLLLQHQRMFHGQKTTAACS*SAKSYN
Trigger: GTTATATGACTTGGCAGATCAACTACATGCTGCAGT...TGTTTTCTGTCCGTGGAACATCCTTTGATGCTGCAGCAACAAGTGGCGGTAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
CDS-3UTR GCA 90 bp TTCCCTTCTCTTCCCTACTGTCTGCTTGATCCAGGTCACTACTCCTACTTCTGCAGGGAATCATTTGCATaGTCAGCTATTACCAGGGTA +
Preference number: 4 (lower is better)
Translates to: FPSLPYCLLDPGHYSYFCRESFA*SAITRV
Trigger: TACCCTGGTAATAGCTGAGCATGCAAATGATTCCCT...GCAGAAGTAGGAGTAGTGACCTGGATCAAGCAGACAGTAGGGAAGAGAAGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS-3UTR GCA 90 bp ATGTCAGAAATCGGGGCAACCTCAAGTTTGGCTGCTACTCTGGGCAAAAGGTTCAGGGAATCATTTGCATaGTCAGCTATTACCAGGGTA +
Preference number: 4 (lower is better)
Translates to: MSEIGATSSLAATLGKRFRESFA*SAITRV
Trigger: TACCCTGGTAATAGCTGAGCATGCAAATGATTCCCT...GAACCTTTTGCCCAGAGTAGCAGCCAAACTTGAGGTTGCCCCGATTTCTGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267950.12
ENST00000560044.5
ENST00000560309.5
CDS-3UTR GCA 90 bp AATGTGTCAGGTGACTTGATTGCAATGATGTCAGAAATCGGGGCAACCTCAAGTCTTTCCGAAGGCAGATaGTCCAGCACAGATGTGTGT +
Preference number: 4 (lower is better)
Translates to: NVSGDLIAMMSEIGATSSLSEGR*SSTDVC
Trigger: ACACACATCTGTGCTGGAGCATCTGCCTTCGGAAAG...ACTTGAGGTTGCCCCGATTTCTGACATCATTGCAATCAAGTCACCTGACACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267950.12
ENST00000560044.5
ENST00000560309.5
CDS-3UTR GCA 90 bp ATTGCCACAATTGTCTTGCTGTCTTTCATCCCAGCTAAATGTTGGATGGCTCCAACCGCCACTTGTTGCTaGAGCATCAAAGGATGTTCC +
Preference number: 4 (lower is better)
Translates to: IATIVLLSFIPAKCWMAPTATCC*SIKGCS
Trigger: GGAACATCCTTTGATGCTGCAGCAACAAGTGGCGGT...TGGAGCCATCCAACATTTAGCTGGGATGAAAGACAGCAAGACAATTGTGGCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267950.12
CDS-3UTR GCA 90 bp AAGCCTCGACCACCAGATACCACCACTTTGGCACCTGTTAGCTCTGGTCGATCAAACTATTCCATAATCTaGCACTTGGAAAATTGGAGC +
Preference number: 4 (lower is better)
Translates to: KPRPPDTTTLAPVSSGRSNYSII*HLENWS
Trigger: GCTCCAATTTTCCAAGTGGCAGATTATGGAATAGTT...TGATCGACCAGAGCTAACAGGTGCCAAAGTGGTGGTATCTGGTGGTCGAGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267950.12
CDS-3UTR GCA 90 bp GTGGAGACAATCATGTTTACAATCTTCCTAAAACATAGAGCTCTCCATGAACAACTCTGCTCTTGGGCCTaGATCCACACCAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: VETIMFTIFLKHRALHEQLCSWA*IHTSCS
Trigger: GCTGCAGCTGGTGTGGATGCAGGCCCAAGAGCAGAG...TTGTTCATGGAGAGCTCTATGTTTTAGGAAGATTGTAAACATGATTGTCTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS-3UTR CCA 90 bp TCAGGTGACTTGATTGCAATGATGTCAGAAATCGGGGCAACCTCAAGTTTGGCTGTTTGGCTGCTACTCTaGGCAAAAGGTTCTTTCCGA +
Preference number: 4 (lower is better)
Translates to: SGDLIAMMSEIGATSSLAVWLLL*AKGSFR
Trigger: TCGGAAAGAACCTTTTGCCCAGAGTAGCAGCCAAAC...AGCCAAACTTGAGGTTGCCCCGATTTCTGACATCATTGCAATCAAGTCACCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267950.12
ENST00000560044.5
ENST00000560309.5
CDS-3UTR CCA 90 bp GGTTCCTCAGAGAGATGTGCAGAAGATGCCAGAATGTCTAAGATTGGAACATGGGTTTGGCTGCTACTCTaGGCAAAAGGTTCTTTCCGA +
Preference number: 4 (lower is better)
Translates to: GSSERCAEDARMSKIGTWVWLLL*AKGSFR
Trigger: TCGGAAAGAACCTTTTGCCCAGAGTAGCAGCCAAAC...CCATGTTCCAATCTTAGACATTCTGGCATCTTCTGCACATCTCTCTGAGGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560899.5
CDS-3UTR CCA 90 bp GGTTCCTCAGAGAGATGTGCAGAAGATGCCAGAATGTCTAAGATTGGAACATGGATGCCTTTTCTGAACTaGCACTACCGCCACTTGTTG +
Preference number: 4 (lower is better)
Translates to: GSSERCAEDARMSKIGTWMPFLN*HYRHLL
Trigger: CAACAAGTGGCGGTAGTGCCAGTTCAGAAAAGGCAT...CCATGTTCCAATCTTAGACATTCTGGCATCTTCTGCACATCTCTCTGAGGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560899.5
CDS-3UTR CCA 90 bp AATGTGTCAGGTGACTTGATTGCAATGATGTCAGAAATCGGGGCAACCTCAAGTCAGATACCACCACTTTaGCACCTGTTAGCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: NVSGDLIAMMSEIGATSSQIPPL*HLLALV
Trigger: GACCAGAGCTAACAGGTGCCAAAGTGGTGGTATCTG...ACTTGAGGTTGCCCCGATTTCTGACATCATTGCAATCAAGTCACCTGACACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
CDS-3UTR CCA 90 bp CACTACCGCCACTTGTTGCTGCAGCATCAAAGGATGTTCCACGGACAGAAAACACAGCTAAATGTTGGATaGCTCCAGATATTCCAACAG +
Preference number: 4 (lower is better)
Translates to: HYRHLLLQHQRMFHGQKTQLNVG*LQIFQQ
Trigger: CTGTTGGAATATCTGGAGCCATCCAACATTTAGCTG...TGTTTTCTGTCCGTGGAACATCCTTTGATGCTGCAGCAACAAGTGGCGGTAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267950.12
CDS-3UTR CCA 90 bp ATGTCAGAAATCGGGGCAACCTCAAGTTTGGCTGCTACTCTGGGCAAAAGGTTCATCCCAGCTAAATGTTaGATGGCTCCAGATATTCCA +
Preference number: 4 (lower is better)
Translates to: MSEIGATSSLAATLGKRFIPAKC*MAPDIP
Trigger: TGGAATATCTGGAGCCATCCAACATTTAGCTGGGAT...GAACCTTTTGCCCAGAGTAGCAGCCAAACTTGAGGTTGCCCCGATTTCTGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000267950.12
CDS-3UTR CCA 90 bp GTGGAGACAATCATGTTTACAATCTTCCTAAAACATAGAGCTCTCCATGAACAAACCAGCCTCTGCTCTTaGGCCTGCATCCACACCAGC +
Preference number: 4 (lower is better)
Translates to: VETIMFTIFLKHRALHEQTSLCS*ACIHTS
Trigger: GCTGGTGTGGATGCAGGCCCAAGAGCAGAGGCTGGT...TTGTTCATGGAGAGCTCTATGTTTTAGGAAGATTGTAAACATGATTGTCTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557943.6
3UTR CAA 72 bp ATTGCAATGATGTCAGAAATCGGGGCAACCTCAAGTTaGGCTGCTACTCTGGGCAAAAGGTTCTTTCCGAAG +
Preference number: 4 (lower is better)
Translates to: IAMMSEIGATSS*AATLGKRFFPK
Trigger: CTTCGGAAAGAACCTTTTGCCCAGAGTAGCAGCCAAACTTGAGGTTGCCCCGATTTCTGACATCATTGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267950.12
ENST00000560044.5
ENST00000560309.5
3UTR CAA 72 bp GGCCTTTGTACACATCATGCTGAGCCACCAGAACTTTaGCTATGCCTGCTACTTTACAGAGATCTTGTGCCA +
Preference number: 4 (lower is better)
Translates to: GLCTHHAEPPEL*LCLLLYRDLVP
Trigger: TGGCACAAGATCTCTGTAAAGTAGCAGGCATAGCAAAAGTTCTGGTGGCTCAGCATGATGTGTACAAAGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560044.5
CDS-3UTR TCA 90 bp CTTCCCTACTGTCTGCTTGATCCAGGTCACTACTCCTACTTCTGCAGATCTGATAGATGTGTGTGTAATTaGACTGCTTCTGAGTTGCCA +
Preference number: 4 (lower is better)
Translates to: LPYCLLDPGHYSYFCRSDRCVCN*TASELP
Trigger: TGGCAACTCAGAAGCAGTTCAATTACACACACATCT...ATCAGATCTGCAGAAGTAGGAGTAGTGACCTGGATCAAGCAGACAGTAGGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS-3UTR TCA 90 bp CAACTTGCATGTCATTGGGAACAAAGCCAGCATCAACAGCAGCACGGGAAGCACTTTTCCCTCAAATTATaGAATGTAGCTCTCCATGCT +
Preference number: 4 (lower is better)
Translates to: QLACHWEQSQHQQQHGKHFSLKL*NVALHA
Trigger: AGCATGGAGAGCTACATTTCATAATTTGAGGGAAAA...GTGCTTCCCGTGCTGCTGTTGATGCTGGCTTTGTTCCCAATGACATGCAAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267950.12
CDS-3UTR TCA 90 bp CTTCCCTACTGTCTGCTTGATCCAGGTCACTACTCCTACTTCTGCAGATCTGATATGAGATTAGTAGGTTaGTTAGGCTGGTGGAGACAA +
Preference number: 4 (lower is better)
Translates to: LPYCLLDPGHYSYFCRSDMRLVG*LGWWRQ
Trigger: TTGTCTCCACCAGCCTAATCAACCTACTAATCTCAT...ATCAGATCTGCAGAAGTAGGAGTAGTGACCTGGATCAAGCAGACAGTAGGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS-3UTR TCA 90 bp CTGGTGGAGACAATCATGTTTACAATCTTCCTAAAACATAGAGCTCTCCATGAACTACTTCTGCAGATCTaGTTCAGGAGGGCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: LVETIMFTIFLKHRALHELLLQI*FRRAAL
Trigger: GAGGGCTGCCCTCCTGAATCAGATCTGCAGAAGTAG...TTCATGGAGAGCTCTATGTTTTAGGAAGATTGTAAACATGATTGTCTCCACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS-3UTR TCA 90 bp TTTTTCCCGTCTGTCCAACTTGCATGTCATTGGGAACAAAGCCAGCATCAACAGATTACCAGGGTACTCTaGAATCGTAGCAATGAGGCA +
Preference number: 4 (lower is better)
Translates to: FFPSVQLACHWEQSQHQQITRVL*NRSNEA
Trigger: TGCCTCATTGCTACGATTTCAGAGTACCCTGGTAAT...CTGTTGATGCTGGCTTTGTTCCCAATGACATGCAAGTTGGACAGACGGGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560044.5
CDS-3UTR GCA 90 bp GGCAGATGCTCCAGCACAGATGTGTGTGTAATTGAACTGCTTCTGAGTTGCCAAGAACTGCTTCTGAGTTaGCAAAATCAATGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: GRCSSTDVCVIELLLSCQELLLS*QNQWCQ
Trigger: CTGACACCATTGATTTTGGCAACTCAGAAGCAGTTC...TTGGCAACTCAGAAGCAGTTCAATTACACACACATCTGTGCTGGAGCATCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267950.12
ENST00000560044.5
ENST00000560309.5
CDS-3UTR GCA 90 bp GAGAGATGTGCAGAAGATGCCAGAATGTCTAAGATTGGAACATGGTATAGTCCACTTTCCGAAGGCAGATaGTCCAGCACAGATGTGTGT +
Preference number: 4 (lower is better)
Translates to: ERCAEDARMSKIGTWYSPLSEGR*SSTDVC
Trigger: ACACACATCTGTGCTGGAGCATCTGCCTTCGGAAAG...TGGACTATACCATGTTCCAATCTTAGACATTCTGGCATCTTCTGCACATCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560899.5
CDS-3UTR GCA 90 bp TCAGGTGACTTGATTGCAATGATGTCAGAAATCGGGGCAACCTCAAGTTTGGCTAACCTCAAGTTTGGCTaGTACTCTGGGCAAAAGGTT +
Preference number: 4 (lower is better)
Translates to: SGDLIAMMSEIGATSSLANLKFG*YSGQKV
Trigger: AACCTTTTGCCCAGAGTAGCAGCCAAACTTGAGGTT...AGCCAAACTTGAGGTTGCCCCGATTTCTGACATCATTGCAATCAAGTCACCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267950.12
ENST00000560044.5
ENST00000560309.5
CDS-3UTR GCA 90 bp CTTCTCTTCCCTACTGTCTGCTTGATCCAGGTCACTACTCCTACTTCTGCAGATTTGCCACAATTGTCTTaGTGTCTTTCATCCCAGCTA +
Preference number: 4 (lower is better)
Translates to: LLFPTVCLIQVTTPTSADLPQLS*CLSSQL
Trigger: TAGCTGGGATGAAAGACAGCAAGACAATTGTGGCAA...ATCTGCAGAAGTAGGAGTAGTGACCTGGATCAAGCAGACAGTAGGGAAGAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS-3UTR GCA 90 bp TCCGAAGGCAGATGCTCCAGCACAGATGTGTGTGTAATTGAACTGCTTCTGAGTAGCCACCAGAACTTTTaGTATGCCTGCTACTTTACA +
Preference number: 4 (lower is better)
Translates to: SEGRCSSTDVCVIELLLSSHQNF*YACYFT
Trigger: TGTAAAGTAGCAGGCATAGCAAAAGTTCTGGTGGCT...ACTCAGAAGCAGTTCAATTACACACACATCTGTGCTGGAGCATCTGCCTTCGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560044.5
CDS-3UTR CCA 90 bp GCCTTTTCTGAACTGGCACTACCGCCACTTGTTGCTGCAGCATCAAAGGATGTTAGTTGCCAAAATCAATaGTGTCAGTTCCTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: AFSELALPPLVAAASKDVSCQNQ*CQFLLS
Trigger: TGACAAGAGGAACTGACACCATTGATTTTGGCAACT...AACATCCTTTGATGCTGCAGCAACAAGTGGCGGTAGTGCCAGTTCAGAAAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000267950.12
CDS-3UTR CCA 90 bp AATGAGATTAGTAGGTTGATTAGGCTGGTGGAGACAATCATGTTTACAATCTTCGGAAGGGCCCCAGGCTaGTCACACAAAGGCACTCTA +
Preference number: 4 (lower is better)
Translates to: NEISRLIRLVETIMFTIFGRAPG*SHKGTL
Trigger: TAGAGTGCCTTTGTGTGACCAGCCTGGGGCCCTTCC...GAAGATTGTAAACATGATTGTCTCCACCAGCCTAATCAACCTACTAATCTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS-3UTR CCA 90 bp AGAGATGTGCAGAAGATGCCAGAATGTCTAAGATTGGAACATGGTATAGTCCAGAGTTGCCAAAATCAATaGTGTCAGTTCCTCGCCCGC +
Preference number: 4 (lower is better)
Translates to: RDVQKMPECLRLEHGIVQSCQNQ*CQFLAR
Trigger: GCGGGCGAGGAACTGACACCATTGATTTTGGCAACT...CTGGACTATACCATGTTCCAATCTTAGACATTCTGGCATCTTCTGCACATCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560899.5
3UTR CAA 72 bp AAGTTCTGGTGCTACTATTTTTCCCGTCTGTCCAACTaGCATGTCATTGGGAACAAAGCCAGCATCAACAGC +
Preference number: 4 (lower is better)
Translates to: KFWCYYFSRLSN*HVIGNKASINS
Trigger: GCTGTTGATGCTGGCTTTGTTCCCAATGACATGCAAGTTGGACAGACGGGAAAAATAGTAGCACCAGAACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
CDS-3UTR GCA 90 bp GTGCAGAAGATGCCAGAATGTCTAAGATTGGAACATGGTATAGTCCAGGTAACTACTACCGCCACTTGTTaGTGCAGCATCAAAGGATGT +
Preference number: 4 (lower is better)
Translates to: VQKMPECLRLEHGIVQVTTTATC*CSIKGC
Trigger: ACATCCTTTGATGCTGCAGCAACAAGTGGCGGTAGT...AGTTACCTGGACTATACCATGTTCCAATCTTAGACATTCTGGCATCTTCTGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560899.5
CDS-3UTR GCA 90 bp AGTTTGCCCTTCAACAATGAGATTAGTAGGTTGATTAGGCTGGTGGAGACAATCCCCGTCTGTCCAACTTaGATGTCATTGGGAACAAAG +
Preference number: 4 (lower is better)
Translates to: SLPFNNEISRLIRLVETIPVCPT*MSLGTK
Trigger: CTTTGTTCCCAATGACATGCAAGTTGGACAGACGGG...GATTGTCTCCACCAGCCTAATCAACCTACTAATCTCATTGTTGAAGGGCAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433983.6
ENST00000557943.6
CDS-3UTR GCA 90 bp TCCTCAGAGAGATGTGCAGAAGATGCCAGAATGTCTAAGATTGGAACATGGTATCCCGTCTGTCCAACTTaGATGTCATTGGGAACAAAG +
Preference number: 4 (lower is better)
Translates to: SSERCAEDARMSKIGTWYPVCPT*MSLGTK
Trigger: CTTTGTTCCCAATGACATGCAAGTTGGACAGACGGG...ATACCATGTTCCAATCTTAGACATTCTGGCATCTTCTGCACATCTCTCTGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560899.5
CDS-3UTR GCA 90 bp TGCTACTCTGGGCAAAAGGTTCTTTCCGAAGGCAGATGCTCCAGCACAGATGTGAATATAAAGTTCTGGTaGTACTATTTTTCCCGTCTG +
Preference number: 4 (lower is better)
Translates to: CYSGQKVLSEGRCSSTDVNIKFW*YYFSRL
Trigger: CAGACGGGAAAAATAGTAGCACCAGAACTTTATATT...CACATCTGTGCTGGAGCATCTGCCTTCGGAAAGAACCTTTTGCCCAGAGTAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
CDS-3UTR GCA 90 bp ATTAGTAGGTTGATTAGGCTGGTGGAGACAATCATGTTTACAATCTTCCTAAAACTACCCACGCCTTCCTaGAGGCCTGTTCAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: ISRLIRLVETIMFTIFLKLPTPS*RPVQSL
Trigger: GAGGCTTTGAACAGGCCTGCAGGAAGGCGTGGGTAG...TTTTAGGAAGATTGTAAACATGATTGTCTCCACCAGCCTAATCAACCTACTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS-3UTR CCA 90 bp CACTACCGCCACTTGTTGCTGCAGCATCAAAGGATGTTCCACGGACAGAAAACAGAAAATTGGAGCTTCTaGGTCTTTATTAATTGCCAC +
Preference number: 4 (lower is better)
Translates to: HYRHLLLQHQRMFHGQKTENWSF*VFINCH
Trigger: GTGGCAATTAATAAAGACCCAGAAGCTCCAATTTTC...TGTTTTCTGTCCGTGGAACATCCTTTGATGCTGCAGCAACAAGTGGCGGTAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000267950.12
CDS-3UTR CCA 90 bp GTGGAGACAATCATGTTTACAATCTTCCTAAAACATAGAGCTCTCCATGAACAAGTGACTACACAGGCCTaGGTGCTTCCTAAGAGAGCC +
Preference number: 4 (lower is better)
Translates to: VETIMFTIFLKHRALHEQVTTQA*VLPKRA
Trigger: GGCTCTCTTAGGAAGCACCCAGGCCTGTGTAGTCAC...TTGTTCATGGAGAGCTCTATGTTTTAGGAAGATTGTAAACATGATTGTCTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS-3UTR GCA 90 bp TGTTGCTGCAGCATCAAAGGATGTTCCACGGACAGAAAACACTTTCACTTTCTCAGGGAATCATTTGCATaGTCAGCTATTACCAGGGTA +
Preference number: 4 (lower is better)
Translates to: CCCSIKGCSTDRKHFHFLRESFA*SAITRV
Trigger: TACCCTGGTAATAGCTGAGCATGCAAATGATTCCCT...GAGAAAGTGAAAGTGTTTTCTGTCCGTGGAACATCCTTTGATGCTGCAGCAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
CDS-3UTR GCA 90 bp AAAGTAATGGGTGCTAGGGAATCATTTGCATGCTCAGCTATTACCAGGGTACTCAGGGAATCATTTGCATaGTCAGCTATTACCAGGGTA +
Preference number: 4 (lower is better)
Translates to: KVMGARESFACSAITRVLRESFA*SAITRV
Trigger: TACCCTGGTAATAGCTGAGCATGCAAATGATTCCCT...GAGTACCCTGGTAATAGCTGAGCATGCAAATGATTCCCTAGCACCCATTACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560044.5
ENST00000560309.5
CDS-3UTR GCA 90 bp CTGGTGGAGACAATCATGTTTACAATCTTCCTAAAACATAGAGCTCTCCATGAACTTTCCGAAGGCAGATaGTCCAGCACAGATGTGTGT +
Preference number: 4 (lower is better)
Translates to: LVETIMFTIFLKHRALHELSEGR*SSTDVC
Trigger: ACACACATCTGTGCTGGAGCATCTGCCTTCGGAAAG...TTCATGGAGAGCTCTATGTTTTAGGAAGATTGTAAACATGATTGTCTCCACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433983.6
ENST00000557943.6
CDS-3UTR GCA 90 bp AGAGATGTGCAGAAGATGCCAGAATGTCTAAGATTGGAACATGGTATAGTCCAGAACCTCAAGTTTGGCTaGTACTCTGGGCAAAAGGTT +
Preference number: 4 (lower is better)
Translates to: RDVQKMPECLRLEHGIVQNLKFG*YSGQKV
Trigger: AACCTTTTGCCCAGAGTAGCAGCCAAACTTGAGGTT...CTGGACTATACCATGTTCCAATCTTAGACATTCTGGCATCTTCTGCACATCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560899.5
CDS-3UTR GCA 90 bp CGACCACCAGATACCACCACTTTGGCACCTGTTAGCTCTGGTCGATCACTTTTTAATATAAAGTTCTGGTaGTACTATTTTTCCCGTCTG +
Preference number: 4 (lower is better)
Translates to: RPPDTTTLAPVSSGRSLFNIKFW*YYFSRL
Trigger: CAGACGGGAAAAATAGTAGCACCAGAACTTTATATT...AAAAAGTGATCGACCAGAGCTAACAGGTGCCAAAGTGGTGGTATCTGGTGGTCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
CDS-3UTR GCA 90 bp AATGTGTCAGGTGACTTGATTGCAATGATGTCAGAAATCGGGGCAACCTCAAGTTTGCCACAATTGTCTTaGTGTCTTTCATCCCAGCTA +
Preference number: 4 (lower is better)
Translates to: NVSGDLIAMMSEIGATSSLPQLS*CLSSQL
Trigger: TAGCTGGGATGAAAGACAGCAAGACAATTGTGGCAA...ACTTGAGGTTGCCCCGATTTCTGACATCATTGCAATCAAGTCACCTGACACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267950.12
CDS-3UTR GCA 90 bp CCATGCTTTCCAATGATTGTTATAATACCCACAAATATCTGTGATTTCAGTGGATGCATCCACACCAGCTaGAGCCCTGGTGACACTCTT +
Preference number: 4 (lower is better)
Translates to: PCFPMIVIIPTNICDFSGCIHTS*SPGDTL
Trigger: AAGAGTGTCACCAGGGCTGCAGCTGGTGTGGATGCA...TCCACTGAAATCACAGATATTTGTGGGTATTATAACAATCATTGGAAAGCATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS-3UTR GCA 90 bp GTGCAGAAGATGCCAGAATGTCTAAGATTGGAACATGGTATAGTCCAGGTAACTCCAGAGAAACATGCTTaGTGTCTTTCATCCCAGCTA +
Preference number: 4 (lower is better)
Translates to: VQKMPECLRLEHGIVQVTPEKHA*CLSSQL
Trigger: TAGCTGGGATGAAAGACAGCAAGCATGTTTCTCTGG...AGTTACCTGGACTATACCATGTTCCAATCTTAGACATTCTGGCATCTTCTGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560899.5
CDS-3UTR CCA 90 bp CTGGTGGAGACAATCATGTTTACAATCTTCCTAAAACATAGAGCTCTCCATGAACAGATACCACCACTTTaGCACCTGTTAGCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: LVETIMFTIFLKHRALHEQIPPL*HLLALV
Trigger: GACCAGAGCTAACAGGTGCCAAAGTGGTGGTATCTG...TTCATGGAGAGCTCTATGTTTTAGGAAGATTGTAAACATGATTGTCTCCACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433983.6
ENST00000557943.6
CDS-3UTR CCA 90 bp AATGTGTCAGGTGACTTGATTGCAATGATGTCAGAAATCGGGGCAACCTCAAGTAGTTGCCAAAATCAATaGTGTCAGTTCCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: NVSGDLIAMMSEIGATSSSCQNQ*CQFLWK
Trigger: CTTCCAGAGGAACTGACACCATTGATTTTGGCAACT...ACTTGAGGTTGCCCCGATTTCTGACATCATTGCAATCAAGTCACCTGACACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560044.5
3UTR CAA 72 bp CCACTTTGGCACCTGTTAGCTCTGGTCGATCACTTTTaGTTAATTTCTGGTCAAGCCACTCTGATATTTCCA +
Preference number: 4 (lower is better)
Translates to: PLWHLLALVDHF*LISGQATLIFP
Trigger: TGGAAATATCAGAGTGGCTTGACCAGAAATTAACAAAAAGTGATCGACCAGAGCTAACAGGTGCCAAAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
CDS-3UTR TCA 90 bp GAGAGATGTGCAGAAGATGCCAGAATGTCTAAGATTGGAACATGGTATAGTCCAACTGCAGCATGTAGTTaGTCTGCCAAGTCATATAAC +
Preference number: 4 (lower is better)
Translates to: ERCAEDARMSKIGTWYSPTAACS*SAKSYN
Trigger: GTTATATGACTTGGCAGATCAACTACATGCTGCAGT...TGGACTATACCATGTTCCAATCTTAGACATTCTGGCATCTTCTGCACATCTCTC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560899.5
CDS-3UTR GCA 90 bp AGTAGGTTGATTAGGCTGGTGGAGACAATCATGTTTACAATCTTCCTAAAACATACCGCCACTTGTTGCTaGAGCATCAAAGGATGTTCC +
Preference number: 4 (lower is better)
Translates to: SRLIRLVETIMFTIFLKHTATCC*SIKGCS
Trigger: GGAACATCCTTTGATGCTGCAGCAACAAGTGGCGGT...ATGTTTTAGGAAGATTGTAAACATGATTGTCTCCACCAGCCTAATCAACCTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433983.6
ENST00000557943.6
CDS-3UTR GCA 90 bp AGTTTGCCCTTCAACAATGAGATTAGTAGGTTGATTAGGCTGGTGGAGACAATCTTGCCACAATTGTCTTaGTGTCTTTCATCCCAGCTA +
Preference number: 4 (lower is better)
Translates to: SLPFNNEISRLIRLVETILPQLS*CLSSQL
Trigger: TAGCTGGGATGAAAGACAGCAAGACAATTGTGGCAA...GATTGTCTCCACCAGCCTAATCAACCTACTAATCTCATTGTTGAAGGGCAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433983.6
ENST00000557943.6
CDS-3UTR GCA 90 bp ACAATCATGTTTACAATCTTCCTAAAACATAGAGCTCTCCATGAACAAGAAAGGTTGCATCAGAGGCCATaGTGTCTCAAAGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: TIMFTIFLKHRALHEQERLHQRP*CLKAAP
Trigger: AGGGGCTGCTTTGAGACAGCATGGCCTCTGATGCAA...CCTTTCTTGTTCATGGAGAGCTCTATGTTTTAGGAAGATTGTAAACATGATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS-3UTR CCA 90 bp CTGGTGGAGACAATCATGTTTACAATCTTCCTAAAACATAGAGCTCTCCATGAAGTTTGGCTGCTACTCTaGGCAAAAGGTTCTTTCCGA +
Preference number: 4 (lower is better)
Translates to: LVETIMFTIFLKHRALHEVWLLL*AKGSFR
Trigger: TCGGAAAGAACCTTTTGCCCAGAGTAGCAGCCAAAC...TTCATGGAGAGCTCTATGTTTTAGGAAGATTGTAAACATGATTGTCTCCACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433983.6
ENST00000557943.6
CDS-3UTR CCA 90 bp AATGAGATTAGTAGGTTGATTAGGCTGGTGGAGACAATCATGTTTACAATCTTCGGGCAACCTCAAGTTTaGCTGCTACTCTGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: NEISRLIRLVETIMFTIFGQPQV*LLLWAK
Trigger: TTTTGCCCAGAGTAGCAGCCAAACTTGAGGTTGCCC...GAAGATTGTAAACATGATTGTCTCCACCAGCCTAATCAACCTACTAATCTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433983.6
ENST00000557943.6
CDS-3UTR CCA 90 bp CTGGTGGAGACAATCATGTTTACAATCTTCCTAAAACATAGAGCTCTCCATGAAATGCCTTTTCTGAACTaGCACTACCGCCACTTGTTG +
Preference number: 4 (lower is better)
Translates to: LVETIMFTIFLKHRALHEMPFLN*HYRHLL
Trigger: CAACAAGTGGCGGTAGTGCCAGTTCAGAAAAGGCAT...TTCATGGAGAGCTCTATGTTTTAGGAAGATTGTAAACATGATTGTCTCCACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433983.6
ENST00000557943.6
CDS-3UTR CCA 90 bp GATCACTTTTTGTTAATTTCTGGTCAAGCCACTCTGATATTTCCACTGGTGAAGATGCCTTTTCTGAACTaGCACTACCGCCACTTGTTG +
Preference number: 4 (lower is better)
Translates to: DHFLLISGQATLIFPLVKMPFLN*HYRHLL
Trigger: CAACAAGTGGCGGTAGTGCCAGTTCAGAAAAGGCAT...CTTCACCAGTGGAAATATCAGAGTGGCTTGACCAGAAATTAACAAAAAGTGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
CDS-3UTR CCA 90 bp GAGAGATGTGCAGAAGATGCCAGAATGTCTAAGATTGGAACATGGTATAGTCCACAACTTGCATGTCATTaGGAACAAAGCCAGCATCAA +
Preference number: 4 (lower is better)
Translates to: ERCAEDARMSKIGTWYSPQLACH*EQSQHQ
Trigger: TTGATGCTGGCTTTGTTCCCAATGACATGCAAGTTG...TGGACTATACCATGTTCCAATCTTAGACATTCTGGCATCTTCTGCACATCTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560899.5
CDS-3UTR CCA 90 bp AGTTTGCCCTTCAACAATGAGATTAGTAGGTTGATTAGGCTGGTGGAGACAATCCAGCTAAATGTTGGATaGCTCCAGATATTCCAACAG +
Preference number: 4 (lower is better)
Translates to: SLPFNNEISRLIRLVETIQLNVG*LQIFQQ
Trigger: CTGTTGGAATATCTGGAGCCATCCAACATTTAGCTG...GATTGTCTCCACCAGCCTAATCAACCTACTAATCTCATTGTTGAAGGGCAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433983.6
ENST00000557943.6
CDS-3UTR CCA 90 bp AGAGATGTGCAGAAGATGCCAGAATGTCTAAGATTGGAACATGGTATAGTCCAGCAGCTAAATGTTGGATaGCTCCAGATATTCCAACAG +
Preference number: 4 (lower is better)
Translates to: RDVQKMPECLRLEHGIVQQLNVG*LQIFQQ
Trigger: CTGTTGGAATATCTGGAGCCATCCAACATTTAGCTG...CTGGACTATACCATGTTCCAATCTTAGACATTCTGGCATCTTCTGCACATCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560899.5
CDS-3UTR CCA 90 bp GAGAGATGTGCAGAAGATGCCAGAATGTCTAAGATTGGAACATGGTATAGTCCAATCCCAGCTAAATGTTaGATGGCTCCAGATATTCCA +
Preference number: 4 (lower is better)
Translates to: ERCAEDARMSKIGTWYSPIPAKC*MAPDIP
Trigger: TGGAATATCTGGAGCCATCCAACATTTAGCTGGGAT...TGGACTATACCATGTTCCAATCTTAGACATTCTGGCATCTTCTGCACATCTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560899.5
CDS-3UTR GCA 90 bp CTGGTGGAGACAATCATGTTTACAATCTTCCTAAAACATAGAGCTCTCCATGAAAACCTCAAGTTTGGCTaGTACTCTGGGCAAAAGGTT +
Preference number: 4 (lower is better)
Translates to: LVETIMFTIFLKHRALHENLKFG*YSGQKV
Trigger: AACCTTTTGCCCAGAGTAGCAGCCAAACTTGAGGTT...TTCATGGAGAGCTCTATGTTTTAGGAAGATTGTAAACATGATTGTCTCCACCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433983.6
ENST00000557943.6
CDS-3UTR GCA 90 bp CGATCACTTTTTGTTAATTTCTGGTCAAGCCACTCTGATATTTCCACTGGTGAAAACCTCAAGTTTGGCTaGTACTCTGGGCAAAAGGTT +
Preference number: 4 (lower is better)
Translates to: RSLFVNFWSSHSDISTGENLKFG*YSGQKV
Trigger: AACCTTTTGCCCAGAGTAGCAGCCAAACTTGAGGTT...TTCACCAGTGGAAATATCAGAGTGGCTTGACCAGAAATTAACAAAAAGTGATCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
CDS-3UTR GCA 90 bp CCATGCTTTCCAATGATTGTTATAATACCCACAAATATCTGTGATTTCAGTGGAACCGCCACTTGTTGCTaGAGCATCAAAGGATGTTCC +
Preference number: 4 (lower is better)
Translates to: PCFPMIVIIPTNICDFSGTATCC*SIKGCS
Trigger: GGAACATCCTTTGATGCTGCAGCAACAAGTGGCGGT...TCCACTGAAATCACAGATATTTGTGGGTATTATAACAATCATTGGAAAGCATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267950.12
ENST00000433983.6
ENST00000557943.6
CDS-3UTR GCA 90 bp AGTAGGTTGATTAGGCTGGTGGAGACAATCATGTTTACAATCTTCCTAAAACATACTACCGCCACTTGTTaGTGCAGCATCAAAGGATGT +
Preference number: 4 (lower is better)
Translates to: SRLIRLVETIMFTIFLKHTTATC*CSIKGC
Trigger: ACATCCTTTGATGCTGCAGCAACAAGTGGCGGTAGT...ATGTTTTAGGAAGATTGTAAACATGATTGTCTCCACCAGCCTAATCAACCTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433983.6
ENST00000557943.6
CDS-3UTR GCA 90 bp TTCAACAATGAGATTAGTAGGTTGATTAGGCTGGTGGAGACAATCATGTTTACACTCTTCCCTACTGTCTaGTTGATCCAGGTCACTACT +
Preference number: 4 (lower is better)
Translates to: FNNEISRLIRLVETIMFTLFPTV*LIQVTT
Trigger: AGTAGTGACCTGGATCAAGCAGACAGTAGGGAAGAG...TGTAAACATGATTGTCTCCACCAGCCTAATCAACCTACTAATCTCATTGTTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS-3UTR CCA 90 bp AATATAAAGTTCTGGTGCTACTATTTTTCCCGTCTGTCCAACTTGCATGTCATTGTTTGGCTGCTACTCTaGGCAAAAGGTTCTTTCCGA +
Preference number: 4 (lower is better)
Translates to: NIKFWCYYFSRLSNLHVIVWLLL*AKGSFR
Trigger: TCGGAAAGAACCTTTTGCCCAGAGTAGCAGCCAAAC...AATGACATGCAAGTTGGACAGACGGGAAAAATAGTAGCACCAGAACTTTATATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
CDS-3UTR CCA 90 bp ATTAGTAGGTTGATTAGGCTGGTGGAGACAATCATGTTTACAATCTTCCTAAAAGGGCAACCTCAAGTTTaGCTGCTACTCTGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: ISRLIRLVETIMFTIFLKGQPQV*LLLWAK
Trigger: TTTTGCCCAGAGTAGCAGCCAAACTTGAGGTTGCCC...TTTTAGGAAGATTGTAAACATGATTGTCTCCACCAGCCTAATCAACCTACTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433983.6
ENST00000557943.6
CDS-3UTR CCA 90 bp AGAGATGTGCAGAAGATGCCAGAATGTCTAAGATTGGAACATGGTATAGTCCAGTCTAAGATTGGAACATaGTATAGTCCAGGTAACTGC +
Preference number: 4 (lower is better)
Translates to: RDVQKMPECLRLEHGIVQSKIGT*YSPGNC
Trigger: GCAGTTACCTGGACTATACCATGTTCCAATCTTAGA...CTGGACTATACCATGTTCCAATCTTAGACATTCTGGCATCTTCTGCACATCTCT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560899.5
CDS-3UTR TCA 90 bp AGTTTGCCCTTCAACAATGAGATTAGTAGGTTGATTAGGCTGGTGGAGACAATCTTTTCCCTCAAATTATaGAATGTAGCTCTCCATGCT +
Preference number: 4 (lower is better)
Translates to: SLPFNNEISRLIRLVETIFSLKL*NVALHA
Trigger: AGCATGGAGAGCTACATTTCATAATTTGAGGGAAAA...GATTGTCTCCACCAGCCTAATCAACCTACTAATCTCATTGTTGAAGGGCAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433983.6
ENST00000557943.6
CDS-3UTR GCA 90 bp CTGGTGGAGACAATCATGTTTACAATCTTCCTAAAACATAGAGCTCTCCATGAAAGCCACCAGAACTTTTaGTATGCCTGCTACTTTACA +
Preference number: 4 (lower is better)
Translates to: LVETIMFTIFLKHRALHESHQNF*YACYFT
Trigger: TGTAAAGTAGCAGGCATAGCAAAAGTTCTGGTGGCT...TTCATGGAGAGCTCTATGTTTTAGGAAGATTGTAAACATGATTGTCTCCACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433983.6
ENST00000557943.6
CDS-3UTR GCA 90 bp TTCAACAATGAGATTAGTAGGTTGATTAGGCTGGTGGAGACAATCATGTTTACAATCAAACTATCTGCTTaGATCAGAGGCCATGCTGTC +
Preference number: 4 (lower is better)
Translates to: FNNEISRLIRLVETIMFTIKLSA*IRGHAV
Trigger: GACAGCATGGCCTCTGATGCAAGCAGATAGTTTGAT...TGTAAACATGATTGTCTCCACCAGCCTAATCAACCTACTAATCTCATTGTTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS-3UTR CCA 90 bp ATTAGTAGGTTGATTAGGCTGGTGGAGACAATCATGTTTACAATCTTCCTAAAAGTTTGGCTGCTACTCTaGGCAAAAGGTTCTTTCCGA +
Preference number: 4 (lower is better)
Translates to: ISRLIRLVETIMFTIFLKVWLLL*AKGSFR
Trigger: TCGGAAAGAACCTTTTGCCCAGAGTAGCAGCCAAAC...TTTTAGGAAGATTGTAAACATGATTGTCTCCACCAGCCTAATCAACCTACTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433983.6
ENST00000557943.6
CDS-3UTR CCA 90 bp ACAATCATGTTTACAATCTTCCTAAAACATAGAGCTCTCCATGAACAAGAAAGGATGCCTTTTCTGAACTaGCACTACCGCCACTTGTTG +
Preference number: 4 (lower is better)
Translates to: TIMFTIFLKHRALHEQERMPFLN*HYRHLL
Trigger: CAACAAGTGGCGGTAGTGCCAGTTCAGAAAAGGCAT...CCTTTCTTGTTCATGGAGAGCTCTATGTTTTAGGAAGATTGTAAACATGATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433983.6
ENST00000557943.6
CDS-3UTR CCA 90 bp CGATCACTTTTTGTTAATTTCTGGTCAAGCCACTCTGATATTTCCACTGGTGAACAACTTGCATGTCATTaGGAACAAAGCCAGCATCAA +
Preference number: 4 (lower is better)
Translates to: RSLFVNFWSSHSDISTGEQLACH*EQSQHQ
Trigger: TTGATGCTGGCTTTGTTCCCAATGACATGCAAGTTG...TTCACCAGTGGAAATATCAGAGTGGCTTGACCAGAAATTAACAAAAAGTGATCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
CDS-3UTR TCA 90 bp TTCAACAATGAGATTAGTAGGTTGATTAGGCTGGTGGAGACAATCATGTTTACAACTGCAGCATGTAGTTaGTCTGCCAAGTCATATAAC +
Preference number: 4 (lower is better)
Translates to: FNNEISRLIRLVETIMFTTAACS*SAKSYN
Trigger: GTTATATGACTTGGCAGATCAACTACATGCTGCAGT...TGTAAACATGATTGTCTCCACCAGCCTAATCAACCTACTAATCTCATTGTTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433983.6
ENST00000557943.6
CDS-3UTR TCA 90 bp AGTAGGTTGATTAGGCTGGTGGAGACAATCATGTTTACAATCTTCCTAAAACATACTGCAGCATGTAGTTaGTCTGCCAAGTCATATAAC +
Preference number: 4 (lower is better)
Translates to: SRLIRLVETIMFTIFLKHTAACS*SAKSYN
Trigger: GTTATATGACTTGGCAGATCAACTACATGCTGCAGT...ATGTTTTAGGAAGATTGTAAACATGATTGTCTCCACCAGCCTAATCAACCTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433983.6
ENST00000557943.6
CDS-3UTR TCA 90 bp AATGAGATTAGTAGGTTGATTAGGCTGGTGGAGACAATCATGTTTACAATCTTCATGAGATTAGTAGGTTaGTTAGGCTGGTGGAGACAA +
Preference number: 4 (lower is better)
Translates to: NEISRLIRLVETIMFTIFMRLVG*LGWWRQ
Trigger: TTGTCTCCACCAGCCTAATCAACCTACTAATCTCAT...GAAGATTGTAAACATGATTGTCTCCACCAGCCTAATCAACCTACTAATCTCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433983.6
ENST00000557943.6
CDS-3UTR GCA 90 bp CCTCAGAGAGATGTGCAGAAGATGCCAGAATGTCTAAGATTGGAACATGGTATAAATATAAAGTTCTGGTaGTACTATTTTTCCCGTCTG +
Preference number: 4 (lower is better)
Translates to: PQRDVQKMPECLRLEHGINIKFW*YYFSRL
Trigger: CAGACGGGAAAAATAGTAGCACCAGAACTTTATATT...TATACCATGTTCCAATCTTAGACATTCTGGCATCTTCTGCACATCTCTCTGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560899.5
CDS-3UTR CCA 90 bp GTGGAGACAATCATGTTTACAATCTTCCTAAAACATAGAGCTCTCCATGAACAACAACTTGCATGTCATTaGGAACAAAGCCAGCATCAA +
Preference number: 4 (lower is better)
Translates to: VETIMFTIFLKHRALHEQQLACH*EQSQHQ
Trigger: TTGATGCTGGCTTTGTTCCCAATGACATGCAAGTTG...TTGTTCATGGAGAGCTCTATGTTTTAGGAAGATTGTAAACATGATTGTCTCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433983.6
ENST00000557943.6
CDS-3UTR CCA 90 bp AGTAGGTTGATTAGGCTGGTGGAGACAATCATGTTTACAATCTTCCTAAAACATCAACTTGCATGTCATTaGGAACAAAGCCAGCATCAA +
Preference number: 4 (lower is better)
Translates to: SRLIRLVETIMFTIFLKHQLACH*EQSQHQ
Trigger: TTGATGCTGGCTTTGTTCCCAATGACATGCAAGTTG...ATGTTTTAGGAAGATTGTAAACATGATTGTCTCCACCAGCCTAATCAACCTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433983.6
ENST00000557943.6
CDS-3UTR CCA 90 bp GTGGAGACAATCATGTTTACAATCTTCCTAAAACATAGAGCTCTCCATGAACAACAGCTAAATGTTGGATaGCTCCAGATATTCCAACAG +
Preference number: 4 (lower is better)
Translates to: VETIMFTIFLKHRALHEQQLNVG*LQIFQQ
Trigger: CTGTTGGAATATCTGGAGCCATCCAACATTTAGCTG...TTGTTCATGGAGAGCTCTATGTTTTAGGAAGATTGTAAACATGATTGTCTCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433983.6
ENST00000557943.6
CDS-3UTR CCA 90 bp TTCAACAATGAGATTAGTAGGTTGATTAGGCTGGTGGAGACAATCATGTTTACAATCCCAGCTAAATGTTaGATGGCTCCAGATATTCCA +
Preference number: 4 (lower is better)
Translates to: FNNEISRLIRLVETIMFTIPAKC*MAPDIP
Trigger: TGGAATATCTGGAGCCATCCAACATTTAGCTGGGAT...TGTAAACATGATTGTCTCCACCAGCCTAATCAACCTACTAATCTCATTGTTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433983.6
ENST00000557943.6
CDS-3UTR CCA 90 bp GTGGAGACAATCATGTTTACAATCTTCCTAAAACATAGAGCTCTCCATGAACAACTAAATACATGGAGCTaGGTCAGGTTTAAGTCAGGT +
Preference number: 4 (lower is better)
Translates to: VETIMFTIFLKHRALHEQLNTWS*VRFKSG
Trigger: ACCTGACTTAAACCTGACCCAGCTCCATGTATTTAG...TTGTTCATGGAGAGCTCTATGTTTTAGGAAGATTGTAAACATGATTGTCTCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS-3UTR TCA 90 bp ATTAGTAGGTTGATTAGGCTGGTGGAGACAATCATGTTTACAATCTTCCTAAAAAGATGTGTGTGTAATTaGACTGCTTCTGAGTTGCCA +
Preference number: 4 (lower is better)
Translates to: ISRLIRLVETIMFTIFLKRCVCN*TASELP
Trigger: TGGCAACTCAGAAGCAGTTCAATTACACACACATCT...TTTTAGGAAGATTGTAAACATGATTGTCTCCACCAGCCTAATCAACCTACTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433983.6
ENST00000557943.6
CDS-3UTR TCA 90 bp TTCAACAATGAGATTAGTAGGTTGATTAGGCTGGTGGAGACAATCATGTTTACAAGTTACCTTCTCCTATaGAGTTTGCCCTTCAACAAT +
Preference number: 4 (lower is better)
Translates to: FNNEISRLIRLVETIMFTSYLLL*SLPFNN
Trigger: ATTGTTGAAGGGCAAACTTCATAGGAGAAGGTAACT...TGTAAACATGATTGTCTCCACCAGCCTAATCAACCTACTAATCTCATTGTTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433983.6
ENST00000557943.6
CDS-3UTR TCA 90 bp AATGAGATTAGTAGGTTGATTAGGCTGGTGGAGACAATCATGTTTACAATCTTCAGTTACCTTCTCCTATaGAGTTTGCCCTTCAACAAT +
Preference number: 4 (lower is better)
Translates to: NEISRLIRLVETIMFTIFSYLLL*SLPFNN
Trigger: ATTGTTGAAGGGCAAACTTCATAGGAGAAGGTAACT...GAAGATTGTAAACATGATTGTCTCCACCAGCCTAATCAACCTACTAATCTCATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433983.6
ENST00000557943.6
CDS-3UTR GCA 90 bp CTGGTGGAGACAATCATGTTTACAATCTTCCTAAAACATAGAGCTCTCCATGAAAACTTTTGCTATGCCTaGTACTTTACAGAGATCTTG +
Preference number: 4 (lower is better)
Translates to: LVETIMFTIFLKHRALHENFCYA*YFTEIL
Trigger: CAAGATCTCTGTAAAGTAGCAGGCATAGCAAAAGTT...TTCATGGAGAGCTCTATGTTTTAGGAAGATTGTAAACATGATTGTCTCCACCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433983.6
ENST00000557943.6
CDS-3UTR GCA 90 bp ACAATCATGTTTACAATCTTCCTAAAACATAGAGCTCTCCATGAACAAGAAAGGAGCCACCAGAACTTTTaGTATGCCTGCTACTTTACA +
Preference number: 4 (lower is better)
Translates to: TIMFTIFLKHRALHEQERSHQNF*YACYFT
Trigger: TGTAAAGTAGCAGGCATAGCAAAAGTTCTGGTGGCT...CCTTTCTTGTTCATGGAGAGCTCTATGTTTTAGGAAGATTGTAAACATGATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433983.6
ENST00000557943.6
CDS-3UTR GCA 90 bp CCATGCTTTCCAATGATTGTTATAATACCCACAAATATCTGTGATTTCAGTGGAATAGTCCAGGTAACTTaGTGTCTTTCATCCCAGCTA +
Preference number: 4 (lower is better)
Translates to: PCFPMIVIIPTNICDFSGIVQVT*CLSSQL
Trigger: TAGCTGGGATGAAAGACAGCAAGTTACCTGGACTAT...TCCACTGAAATCACAGATATTTGTGGGTATTATAACAATCATTGGAAAGCATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565910.5
CDS-3UTR CCA 90 bp TGTAGCTCTCCATGCTTTCCAATGATTGTTATAATACCCACAAATATCTGTGATCAGCTAAATGTTGGATaGCTCCAGATATTCCAACAG +
Preference number: 4 (lower is better)
Translates to: CSSPCFPMIVIIPTNICDQLNVG*LQIFQQ
Trigger: CTGTTGGAATATCTGGAGCCATCCAACATTTAGCTG...ATCACAGATATTTGTGGGTATTATAACAATCATTGGAAAGCATGGAGAGCTACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267950.12
ENST00000433983.6
ENST00000557943.6
ENST00000565910.5
CDS-3UTR CCA 90 bp TGTAGCTCTCCATGCTTTCCAATGATTGTTATAATACCCACAAATATCTGTGATATCCCAGCTAAATGTTaGATGGCTCCAGATATTCCA +
Preference number: 4 (lower is better)
Translates to: CSSPCFPMIVIIPTNICDIPAKC*MAPDIP
Trigger: TGGAATATCTGGAGCCATCCAACATTTAGCTGGGAT...ATCACAGATATTTGTGGGTATTATAACAATCATTGGAAAGCATGGAGAGCTACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267950.12
ENST00000433983.6
ENST00000557943.6
ENST00000565910.5
CDS-3UTR CCA 90 bp CCATGCTTTCCAATGATTGTTATAATACCCACAAATATCTGTGATTTCAGTGGAAGTTGCCAAAATCAATaGTGTCAGTTCCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: PCFPMIVIIPTNICDFSGSCQNQ*CQFLWK
Trigger: CTTCCAGAGGAACTGACACCATTGATTTTGGCAACT...TCCACTGAAATCACAGATATTTGTGGGTATTATAACAATCATTGGAAAGCATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433983.6
ENST00000557943.6
CDS-3UTR TCA 90 bp AATGAGATTAGTAGGTTGATTAGGCTGGTGGAGACAATCATGTTTACAATCTTCTTTTCCCTCAAATTATaGAATGTAGCTCTCCATGCT +
Preference number: 4 (lower is better)
Translates to: NEISRLIRLVETIMFTIFFSLKL*NVALHA
Trigger: AGCATGGAGAGCTACATTTCATAATTTGAGGGAAAA...GAAGATTGTAAACATGATTGTCTCCACCAGCCTAATCAACCTACTAATCTCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433983.6
ENST00000557943.6
CDS-3UTR GCA 90 bp AGTAGGTTGATTAGGCTGGTGGAGACAATCATGTTTACAATCTTCCTAAAACATAACTATTCCATAATCTaGCACTTGGAAAATTGGAGC +
Preference number: 4 (lower is better)
Translates to: SRLIRLVETIMFTIFLKHNYSII*HLENWS
Trigger: GCTCCAATTTTCCAAGTGGCAGATTATGGAATAGTT...ATGTTTTAGGAAGATTGTAAACATGATTGTCTCCACCAGCCTAATCAACCTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433983.6
ENST00000557943.6
CDS-3UTR GCA 90 bp TTTTTGTTAATTTCTGGTCAAGCCACTCTGATATTTCCACTGGTGAAGTACTTGAACTTTTGCTATGCCTaGTACTTTACAGAGATCTTG +
Preference number: 4 (lower is better)
Translates to: FLLISGQATLIFPLVKYLNFCYA*YFTEIL
Trigger: CAAGATCTCTGTAAAGTAGCAGGCATAGCAAAAGTT...CAAGTACTTCACCAGTGGAAATATCAGAGTGGCTTGACCAGAAATTAACAAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560044.5
CDS-3UTR GCA 90 bp AATGAGATTAGTAGGTTGATTAGGCTGGTGGAGACAATCATGTTTACAATCTTCGGTTTAAGTCAGGTCTaGTTTTGTCACATTAGCTAT +
Preference number: 4 (lower is better)
Translates to: NEISRLIRLVETIMFTIFGLSQV*FCHISY
Trigger: ATAGCTAATGTGACAAAAGCAGACCTGACTTAAACC...GAAGATTGTAAACATGATTGTCTCCACCAGCCTAATCAACCTACTAATCTCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS-3UTR CCA 90 bp AATGAGATTAGTAGGTTGATTAGGCTGGTGGAGACAATCATGTTTACAATCTTCGAAAATTGGAGCTTCTaGGTCTTTATTAATTGCCAC +
Preference number: 4 (lower is better)
Translates to: NEISRLIRLVETIMFTIFENWSF*VFINCH
Trigger: GTGGCAATTAATAAAGACCCAGAAGCTCCAATTTTC...GAAGATTGTAAACATGATTGTCTCCACCAGCCTAATCAACCTACTAATCTCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433983.6
ENST00000557943.6
CDS-3UTR TCA 90 bp CCATGCTTTCCAATGATTGTTATAATACCCACAAATATCTGTGATTTCAGTGGATTTTCCCTCAAATTATaGAATGTAGCTCTCCATGCT +
Preference number: 4 (lower is better)
Translates to: PCFPMIVIIPTNICDFSGFSLKL*NVALHA
Trigger: AGCATGGAGAGCTACATTTCATAATTTGAGGGAAAA...TCCACTGAAATCACAGATATTTGTGGGTATTATAACAATCATTGGAAAGCATGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267950.12
ENST00000433983.6
ENST00000557943.6
ENST00000565910.5
CDS-3UTR GCA 90 bp ATTAGTAGGTTGATTAGGCTGGTGGAGACAATCATGTTTACAATCTTCCTAAAAAACTTTTGCTATGCCTaGTACTTTACAGAGATCTTG +
Preference number: 4 (lower is better)
Translates to: ISRLIRLVETIMFTIFLKNFCYA*YFTEIL
Trigger: CAAGATCTCTGTAAAGTAGCAGGCATAGCAAAAGTT...TTTTAGGAAGATTGTAAACATGATTGTCTCCACCAGCCTAATCAACCTACTAAT
36% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000433983.6
ENST00000557943.6
CDS-3UTR GCA 90 bp AGTAGGTTGATTAGGCTGGTGGAGACAATCATGTTTACAATCTTCCTAAAACATTTCTCCTATGAAGTTTaGCCTTCAACAATGAGATTA +
Preference number: 4 (lower is better)
Translates to: SRLIRLVETIMFTIFLKHFSYEV*PSTMRL
Trigger: TAATCTCATTGTTGAAGGGCAAACTTCATAGGAGAA...ATGTTTTAGGAAGATTGTAAACATGATTGTCTCCACCAGCCTAATCAACCTACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433983.6
ENST00000557943.6
CDS-3UTR CCA 90 bp ATTAGTAGGTTGATTAGGCTGGTGGAGACAATCATGTTTACAATCTTCCTAAAAGAAAATTGGAGCTTCTaGGTCTTTATTAATTGCCAC +
Preference number: 4 (lower is better)
Translates to: ISRLIRLVETIMFTIFLKENWSF*VFINCH
Trigger: GTGGCAATTAATAAAGACCCAGAAGCTCCAATTTTC...TTTTAGGAAGATTGTAAACATGATTGTCTCCACCAGCCTAATCAACCTACTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433983.6
ENST00000557943.6
CDS-3UTR CCA 90 bp CCATGCTTTCCAATGATTGTTATAATACCCACAAATATCTGTGATTTCAGTGGAGAAAATTGGAGCTTCTaGGTCTTTATTAATTGCCAC +
Preference number: 4 (lower is better)
Translates to: PCFPMIVIIPTNICDFSGENWSF*VFINCH
Trigger: GTGGCAATTAATAAAGACCCAGAAGCTCCAATTTTC...TCCACTGAAATCACAGATATTTGTGGGTATTATAACAATCATTGGAAAGCATGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267950.12
ENST00000433983.6
ENST00000557943.6
ENST00000565910.5
CDS-3UTR CCA 90 bp CCATGCTTTCCAATGATTGTTATAATACCCACAAATATCTGTGATTTCAGTGGATCTAAGATTGGAACATaGTATAGTCCAGGTAACTTG +
Preference number: 4 (lower is better)
Translates to: PCFPMIVIIPTNICDFSGSKIGT*YSPGNL
Trigger: CAAGTTACCTGGACTATACCATGTTCCAATCTTAGA...TCCACTGAAATCACAGATATTTGTGGGTATTATAACAATCATTGGAAAGCATGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565910.5
CDS-3UTR GCA 90 bp TGTAGCTCTCCATGCTTTCCAATGATTGTTATAATACCCACAAATATCTGTGATAATATAAAGTTCTGGTaGTACTATTTTTCCCGTCTG +
Preference number: 4 (lower is better)
Translates to: CSSPCFPMIVIIPTNICDNIKFW*YYFSRL
Trigger: CAGACGGGAAAAATAGTAGCACCAGAACTTTATATT...ATCACAGATATTTGTGGGTATTATAACAATCATTGGAAAGCATGGAGAGCTACA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267950.12
ENST00000433983.6
ENST00000557943.6
CDS GCA 90 bp ACCAGCCTGGGTAACATGGGGAAACCCCGTCTCGCCCGCCGGAGCTaGCCCGGAGCCGCCGCTCGGAACATGGTCTCCGCTTCCGCCGCA +
Preference number: 5 (lower is better)
Translates to: TSLGNMGKPRLARRS*PGAAARNMVSASAA
Trigger: TGCGGCGGAAGCGGAGACCATGTTCCGAGCGGCGGCTCCGGGGCAGCTCCGGCGGGCGAGACGGGGTTTCCCCATGTTACCCAGGCTGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560044.5
ENST00000560309.5
CDS-3UTR CAA 90 bp AGGGCAGCCCTCTTTGTTCTACTCACCTACCTACCCACGCCTTCCTGCAGGCCTGCCCTGGTGACACTCTaGGACCTCAGCTGTGCCCTG +
Preference number: 5 (lower is better)
Translates to: RAALFVLLTYLPTPSCRPALVTL*DLSCAL
Trigger: CAGGGCACAGCTGAGGTCCAAGAGTGTCACCAGGGC...AGGCCTGCAGGAAGGCGTGGGTAGGTAGGTGAGTAGAACAAAGAGGGCTGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS-3UTR CAA 90 bp AGGGCAGCCCTCTTTGTTCTACTCACCTACCTACCCACGCCTTCCTGCAGGCCTGGGGCAACCTCAAGTTaGGCTGCTACTCTGGGCAAA +
Preference number: 5 (lower is better)
Translates to: RAALFVLLTYLPTPSCRPGATSS*AATLGK
Trigger: TTTGCCCAGAGTAGCAGCCAAACTTGAGGTTGCCCC...AGGCCTGCAGGAAGGCGTGGGTAGGTAGGTGAGTAGAACAAAGAGGGCTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS GCA 90 bp GCCTTTGTACACATCATGCTGAGCCACCAGAACTTTTGCTATGCCTaGTACTTTACAGAGATCTTGTGCCACCGCCCGCCGGAGCTGCCC +
Preference number: 5 (lower is better)
Translates to: AFVHIMLSHQNFCYA*YFTEILCHRPPELP
Trigger: GGGCAGCTCCGGCGGGCGGTGGCACAAGATCTCTGTAAAGTAGCAGGCATAGCAAAAGTTCTGGTGGCTCAGCATGATGTGTACAAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433983.6
CDS-3UTR CAA 90 bp GGCAGCCCTCTTTGTTCTACTCACCTACCTACCCACGCCTTCCTGCAGGCCTGTCCACTGGTGAAGTACTaGATGCCTTTTCTGAACTGG +
Preference number: 5 (lower is better)
Translates to: GSPLCSTHLPTHAFLQACPLVKY*MPFLNW
Trigger: CCAGTTCAGAAAAGGCATCAAGTACTTCACCAGTGG...ACAGGCCTGCAGGAAGGCGTGGGTAGGTAGGTGAGTAGAACAAAGAGGGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS-3UTR CAA 90 bp GCCCCAGGCTGGTCACACAAAGGCACTCTAGCCACCTCCATCACTTATCACTTCCCAGATACCACCACTTaGGCACCTGTTAGCTCTGGT +
Preference number: 5 (lower is better)
Translates to: APGWSHKGTLATSITYHFPDTTT*APVSSG
Trigger: ACCAGAGCTAACAGGTGCCAAAGTGGTGGTATCTGG...GAAGTGATAAGTGATGGAGGTGGCTAGAGTGCCTTTGTGTGACCAGCCTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS GCA 90 bp GTAGGCCTTTGTACACATCATGCTGAGCCACCAGAACTTTTGCTATaGCTGCTACTTTACAGAGATCTTGTGCCACCGCCCGCCGGAGCT +
Preference number: 5 (lower is better)
Translates to: VGLCTHHAEPPELLL*LLLYRDLVPPPAGA
Trigger: AGCTCCGGCGGGCGGTGGCACAAGATCTCTGTAAAGTAGCAGGCATAGCAAAAGTTCTGGTGGCTCAGCATGATGTGTACAAAGGCCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433983.6
CDS GCA 90 bp AGATGCTCCAGCACAGATGTGTGTGTAATTGAACTGCTTCTGAGTTaGCAAAATCAATGGTGTCAGTTCCTCGCCCGCCGGAGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: RCSSTDVCVIELLLS*QNQWCQFLARRSCP
Trigger: GGGGCAGCTCCGGCGGGCGAGGAACTGACACCATTGATTTTGGCAACTCAGAAGCAGTTCAATTACACACACATCTGTGCTGGAGCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560726.5
ENST00000560899.5
CDS-3UTR CAA 90 bp ACTTGCATGTCATTGGGAACAAAGCCAGCATCAACAGCAGCACGGGAAGCACCAGGGGCAACCTCAAGTTaGGCTGCTACTCTGGGCAAA +
Preference number: 5 (lower is better)
Translates to: TCMSLGTKPASTAAREAPGATSS*AATLGK
Trigger: TTTGCCCAGAGTAGCAGCCAAACTTGAGGTTGCCCC...TGGTGCTTCCCGTGCTGCTGTTGATGCTGGCTTTGTTCCCAATGACATGCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
CDS-3UTR CAA 90 bp GGAAGGGCCCCAGGCTGGTCACACAAAGGCACTCTAGCCACCTCCATCACTTATTCCCGTCTGTCCAACTaGCATGTCATTGGGAACAAA +
Preference number: 5 (lower is better)
Translates to: GRAPGWSHKGTLATSITYSRLSN*HVIGNK
Trigger: TTTGTTCCCAATGACATGCAAGTTGGACAGACGGGA...ATAAGTGATGGAGGTGGCTAGAGTGCCTTTGTGTGACCAGCCTGGGGCCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS-3UTR CAA 90 bp GGAAGGGCCCCAGGCTGGTCACACAAAGGCACTCTAGCCACCTCCATCACTTATGAGCCACCAGAACTTTaGCTATGCCTGCTACTTTAC +
Preference number: 5 (lower is better)
Translates to: GRAPGWSHKGTLATSITYEPPEL*LCLLLY
Trigger: GTAAAGTAGCAGGCATAGCAAAAGTTCTGGTGGCTC...ATAAGTGATGGAGGTGGCTAGAGTGCCTTTGTGTGACCAGCCTGGGGCCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS-3UTR CAA 90 bp GGCAGCAGAATGAGAGTGCCAGAGGTGACTACACAGGCCTGGGTGCTTCCTAAGCATCAAACTATCTGCTaGCATCAGAGGCCATGCTGT +
Preference number: 5 (lower is better)
Translates to: GSRMRVPEVTTQAWVLPKHQTIC*HQRPCC
Trigger: ACAGCATGGCCTCTGATGCAAGCAGATAGTTTGATG...CTTAGGAAGCACCCAGGCCTGTGTAGTCACCTCTGGCACTCTCATTCTGCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS-3UTR CAA 90 bp CCACTGGTGAAGTACTTGATGCCTTTTCTGAACTGGCACTACCGCCACTTGTTGGGGGCAACCTCAAGTTaGGCTGCTACTCTGGGCAAA +
Preference number: 5 (lower is better)
Translates to: PLVKYLMPFLNWHYRHLLGATSS*AATLGK
Trigger: TTTGCCCAGAGTAGCAGCCAAACTTGAGGTTGCCCC...CAACAAGTGGCGGTAGTGCCAGTTCAGAAAAGGCATCAAGTACTTCACCAGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
CDS-3UTR CAA 90 bp GAAATCGGGGCAACCTCAAGTTTGGCTGCTACTCTGGGCAAAAGGTTCTTTCCGCACTACCGCCACTTGTaGCTGCAGCATCAAAGGATG +
Preference number: 5 (lower is better)
Translates to: EIGATSSLAATLGKRFFPHYRHL*LQHQRM
Trigger: CATCCTTTGATGCTGCAGCAACAAGTGGCGGTAGTG...CGGAAAGAACCTTTTGCCCAGAGTAGCAGCCAAACTTGAGGTTGCCCCGATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
CDS-3UTR CAA 90 bp GGAAGGGCCCCAGGCTGGTCACACAAAGGCACTCTAGCCACCTCCATCACTTATATTGCCACAATTGTCTaGCTGTCTTTCATCCCAGCT +
Preference number: 5 (lower is better)
Translates to: GRAPGWSHKGTLATSITYIATIV*LSFIPA
Trigger: AGCTGGGATGAAAGACAGCAAGACAATTGTGGCAAT...ATAAGTGATGGAGGTGGCTAGAGTGCCTTTGTGTGACCAGCCTGGGGCCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS-3UTR CAA 90 bp TGCATGTCATTGGGAACAAAGCCAGCATCAACAGCAGCACGGGAAGCACCAACTAGGCAGGTGGATCACTaGAGGACAAGAGTTCGAGAC +
Preference number: 5 (lower is better)
Translates to: CMSLGTKPASTAAREAPTRQVDH*RTRVRD
Trigger: GTCTCGAACTCTTGTCCTCAAGTGATCCACCTGCCT...AGTTGGTGCTTCCCGTGCTGCTGTTGATGCTGGCTTTGTTCCCAATGACATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560044.5
CDS-3UTR CAA 90 bp GCTACTCTGGGCAAAAGGTTCTTTCCGAAGGCAGATGCTCCAGCACAGATGTGTAGGCAGGTGGATCACTaGAGGACAAGAGTTCGAGAC +
Preference number: 5 (lower is better)
Translates to: ATLGKRFFPKADAPAQMCRQVDH*RTRVRD
Trigger: GTCTCGAACTCTTGTCCTCAAGTGATCCACCTGCCT...ACACATCTGTGCTGGAGCATCTGCCTTCGGAAAGAACCTTTTGCCCAGAGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560044.5
ENST00000560309.5
CDS-3UTR CAA 90 bp GTACTTGATGCCTTTTCTGAACTGGCACTACCGCCACTTGTTGCTGCAGCATCACACTACCGCCACTTGTaGCTGCAGCATCAAAGGATG +
Preference number: 5 (lower is better)
Translates to: VLDAFSELALPPLVAAASHYRHL*LQHQRM
Trigger: CATCCTTTGATGCTGCAGCAACAAGTGGCGGTAGTG...TGATGCTGCAGCAACAAGTGGCGGTAGTGCCAGTTCAGAAAAGGCATCAAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
CDS-3UTR CAA 90 bp CTTCCCTACTGTCTGCTTGATCCAGGTCACTACTCCTACTTCTGCAGATCTGATTGGCACTACCGCCACTaGTTGCTGCAGCATCAAAGG +
Preference number: 5 (lower is better)
Translates to: LPYCLLDPGHYSYFCRSDWHYRH*LLQHQR
Trigger: CCTTTGATGCTGCAGCAACAAGTGGCGGTAGTGCCA...ATCAGATCTGCAGAAGTAGGAGTAGTGACCTGGATCAAGCAGACAGTAGGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS-3UTR CAA 90 bp GGCAGCAGAATGAGAGTGCCAGAGGTGACTACACAGGCCTGGGTGCTTCCTAAGCTGGTCGATCACTTTTaGTTAATTTCTGGTCAAGCC +
Preference number: 5 (lower is better)
Translates to: GSRMRVPEVTTQAWVLPKLVDHF*LISGQA
Trigger: GGCTTGACCAGAAATTAACAAAAAGTGATCGACCAG...CTTAGGAAGCACCCAGGCCTGTGTAGTCACCTCTGGCACTCTCATTCTGCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS-3UTR CAA 90 bp CACTACCGCCACTTGTTGCTGCAGCATCAAAGGATGTTCCACGGACAGAAAACACCAGATACCACCACTTaGGCACCTGTTAGCTCTGGT +
Preference number: 5 (lower is better)
Translates to: HYRHLLLQHQRMFHGQKTPDTTT*APVSSG
Trigger: ACCAGAGCTAACAGGTGCCAAAGTGGTGGTATCTGG...TGTTTTCTGTCCGTGGAACATCCTTTGATGCTGCAGCAACAAGTGGCGGTAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
CDS-3UTR CAA 90 bp AGTTTGCCCTTCAACAATGAGATTAGTAGGTTGATTAGGCTGGTGGAGACAATCCACCAGCCTCTGCTCTaGGGCCTGCATCCACACCAG +
Preference number: 5 (lower is better)
Translates to: SLPFNNEISRLIRLVETIHQPLL*GLHPHQ
Trigger: CTGGTGTGGATGCAGGCCCAAGAGCAGAGGCTGGTG...GATTGTCTCCACCAGCCTAATCAACCTACTAATCTCATTGTTGAAGGGCAAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS CCA 90 bp TCCTTGGTGCTACTATTTTTCCCGTCTGTCCAACTTGCATGTCATTaGGAACAAAGCCAGCATCAACAGCAGCACGGGAAGCACCAACTG +
Preference number: 5 (lower is better)
Translates to: SLVLLFFPSVQLACH*EQSQHQQQHGKHQL
Trigger: CAGTTGGTGCTTCCCGTGCTGCTGTTGATGCTGGCTTTGTTCCCAATGACATGCAAGTTGGACAGACGGGAAAAATAGTAGCACCAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560816.5
CDS CCA 90 bp GTTCTGGTGCTACTATTTTTCCCGTCTGTCCAACTTGCATGTCATTaGGAACAAAGCCAGCATCAACAGCAGCACGGGAAGCACCAACAC +
Preference number: 5 (lower is better)
Translates to: VLVLLFFPSVQLACH*EQSQHQQQHGKHQH
Trigger: GTGTTGGTGCTTCCCGTGCTGCTGTTGATGCTGGCTTTGTTCCCAATGACATGCAAGTTGGACAGACGGGAAAAATAGTAGCACCAGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560595.5
CDS-3UTR CAA 90 bp TCAGGTGACTTGATTGCAATGATGTCAGAAATCGGGGCAACCTCAAGTTTGGCTGGGGCAACCTCAAGTTaGGCTGCTACTCTGGGCAAA +
Preference number: 5 (lower is better)
Translates to: SGDLIAMMSEIGATSSLAGATSS*AATLGK
Trigger: TTTGCCCAGAGTAGCAGCCAAACTTGAGGTTGCCCC...AGCCAAACTTGAGGTTGCCCCGATTTCTGACATCATTGCAATCAAGTCACCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267950.12
ENST00000560044.5
ENST00000560309.5
CDS-3UTR CAA 90 bp AGGGGTTCCTCAGAGAGATGTGCAGAAGATGCCAGAATGTCTAAGATTGGAACAGGGGCAACCTCAAGTTaGGCTGCTACTCTGGGCAAA +
Preference number: 5 (lower is better)
Translates to: RGSSERCAEDARMSKIGTGATSS*AATLGK
Trigger: TTTGCCCAGAGTAGCAGCCAAACTTGAGGTTGCCCC...TGTTCCAATCTTAGACATTCTGGCATCTTCTGCACATCTCTCTGAGGAACCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560899.5
CDS-3UTR CAA 90 bp GGCAGCAGAATGAGAGTGCCAGAGGTGACTACACAGGCCTGGGTGCTTCCTAAGAATGTGTCAGGTGACTaGATTGCAATGATGTCAGAA +
Preference number: 5 (lower is better)
Translates to: GSRMRVPEVTTQAWVLPKNVSGD*IAMMSE
Trigger: TTCTGACATCATTGCAATCAAGTCACCTGACACATT...CTTAGGAAGCACCCAGGCCTGTGTAGTCACCTCTGGCACTCTCATTCTGCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS-3UTR CAA 90 bp GGCAGATGCTCCAGCACAGATGTGTGTGTAATTGAACTGCTTCTGAGTTGCCAACCAGATACCACCACTTaGGCACCTGTTAGCTCTGGT +
Preference number: 5 (lower is better)
Translates to: GRCSSTDVCVIELLLSCQPDTTT*APVSSG
Trigger: ACCAGAGCTAACAGGTGCCAAAGTGGTGGTATCTGG...TTGGCAACTCAGAAGCAGTTCAATTACACACACATCTGTGCTGGAGCATCTGCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
CDS-3UTR CAA 90 bp CTCAAGTTTGGCTGCTACTCTGGGCAAAAGGTTCTTTCCGAAGGCAGATGCTCCTCCCGTCTGTCCAACTaGCATGTCATTGGGAACAAA +
Preference number: 5 (lower is better)
Translates to: LKFGCYSGQKVLSEGRCSSRLSN*HVIGNK
Trigger: TTTGTTCCCAATGACATGCAAGTTGGACAGACGGGA...GGAGCATCTGCCTTCGGAAAGAACCTTTTGCCCAGAGTAGCAGCCAAACTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
CDS-3UTR CAA 90 bp GAAATCGGGGCAACCTCAAGTTTGGCTGCTACTCTGGGCAAAAGGTTCTTTCCGAGATCTTGTGCCACCTaGTCACATTTGGTTCCAGCT +
Preference number: 5 (lower is better)
Translates to: EIGATSSLAATLGKRFFPRSCAT*SHLVPA
Trigger: AGCTGGAACCAAATGTGACAAGGTGGCACAAGATCT...CGGAAAGAACCTTTTGCCCAGAGTAGCAGCCAAACTTGAGGTTGCCCCGATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560044.5
CDS CCA 90 bp TTACTGGTGCTACTATTTTTCCCGTCTGTCCAACTTGCATGTCATTaGGAACAAAGCCAGCATCAACAGCAGCACGGGAAGCACCAACTG +
Preference number: 5 (lower is better)
Translates to: LLVLLFFPSVQLACH*EQSQHQQQHGKHQL
Trigger: CAGTTGGTGCTTCCCGTGCTGCTGTTGATGCTGGCTTTGTTCCCAATGACATGCAAGTTGGACAGACGGGAAAAATAGTAGCACCAGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558803.1
ENST00000559758.5
CDS-3UTR CAA 90 bp TGCATGTCATTGGGAACAAAGCCAGCATCAACAGCAGCACGGGAAGCACCAACTGTGCTAGGGAATCATTaGCATGCTCAGCTATTACCA +
Preference number: 5 (lower is better)
Translates to: CMSLGTKPASTAAREAPTVLGNH*HAQLLP
Trigger: TGGTAATAGCTGAGCATGCAAATGATTCCCTAGCAC...AGTTGGTGCTTCCCGTGCTGCTGTTGATGCTGGCTTTGTTCCCAATGACATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
CDS-3UTR CAA 90 bp CTCTGGGCAAAAGGTTCTTTCCGAAGGCAGATGCTCCAGCACAGATGTGTGTGTGTGCTAGGGAATCATTaGCATGCTCAGCTATTACCA +
Preference number: 5 (lower is better)
Translates to: LWAKGSFRRQMLQHRCVCVLGNH*HAQLLP
Trigger: TGGTAATAGCTGAGCATGCAAATGATTCCCTAGCAC...ACACACACATCTGTGCTGGAGCATCTGCCTTCGGAAAGAACCTTTTGCCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267950.12
ENST00000560044.5
ENST00000560309.5
CDS-3UTR CAA 90 bp CTTGTTGCTGCAGCATCAAAGGATGTTCCACGGACAGAAAACACTTTCACTTTCTGGCACTACCGCCACTaGTTGCTGCAGCATCAAAGG +
Preference number: 5 (lower is better)
Translates to: LVAAASKDVPRTENTFTFWHYRH*LLQHQR
Trigger: CCTTTGATGCTGCAGCAACAAGTGGCGGTAGTGCCA...GAAAGTGAAAGTGTTTTCTGTCCGTGGAACATCCTTTGATGCTGCAGCAACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
CDS-3UTR CAA 90 bp GTACTTGATGCCTTTTCTGAACTGGCACTACCGCCACTTGTTGCTGCAGCATCACCACTGGTGAAGTACTaGATGCCTTTTCTGAACTGG +
Preference number: 5 (lower is better)
Translates to: VLDAFSELALPPLVAAASPLVKY*MPFLNW
Trigger: CCAGTTCAGAAAAGGCATCAAGTACTTCACCAGTGG...TGATGCTGCAGCAACAAGTGGCGGTAGTGCCAGTTCAGAAAAGGCATCAAGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
CDS-3UTR CAA 90 bp CAAGTTTGGCTGCTACTCTGGGCAAAAGGTTCTTTCCGAAGGCAGATGCTCCAGATTGCCACAATTGTCTaGCTGTCTTTCATCCCAGCT +
Preference number: 5 (lower is better)
Translates to: QVWLLLWAKGSFRRQMLQIATIV*LSFIPA
Trigger: AGCTGGGATGAAAGACAGCAAGACAATTGTGGCAAT...CTGGAGCATCTGCCTTCGGAAAGAACCTTTTGCCCAGAGTAGCAGCCAAACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267950.12
CDS-3UTR CAA 90 bp CAGAAATCGGGGCAACCTCAAGTTTGGCTGCTACTCTGGGCAAAAGGTTCTTTCGAGCCACCAGAACTTTaGCTATGCCTGCTACTTTAC +
Preference number: 5 (lower is better)
Translates to: QKSGQPQVWLLLWAKGSFEPPEL*LCLLLY
Trigger: GTAAAGTAGCAGGCATAGCAAAAGTTCTGGTGGCTC...GAAAGAACCTTTTGCCCAGAGTAGCAGCCAAACTTGAGGTTGCCCCGATTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560044.5
CDS-3UTR CAA 90 bp GGCAGATGCTCCAGCACAGATGTGTGTGTAATTGAACTGCTTCTGAGTTGCCAAGCCACCTTGTCACATTaGGTTCCAGCTACTAAGCAG +
Preference number: 5 (lower is better)
Translates to: GRCSSTDVCVIELLLSCQATLSH*VPATKQ
Trigger: CTGCTTAGTAGCTGGAACCAAATGTGACAAGGTGGC...TTGGCAACTCAGAAGCAGTTCAATTACACACACATCTGTGCTGGAGCATCTGCC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560044.5
CDS GCA 90 bp TTTCTCTCTGTCCTTGGTGCTACTATTTTTCCCGTCTGTCCAACTTaGATGTCATTGGGAACAAAGCCAGCATCAACAGCAGCACGGGAA +
Preference number: 5 (lower is better)
Translates to: FLSVLGATIFPVCPT*MSLGTKPASTAARE
Trigger: TTCCCGTGCTGCTGTTGATGCTGGCTTTGTTCCCAATGACATGCAAGTTGGACAGACGGGAAAAATAGTAGCACCAAGGACAGAGAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560816.5
CDS-3UTR CAA 90 bp GATACCACCACTTTGGCACCTGTTAGCTCTGGTCGATCACTTTTTGTTAATTTCTGGCACTACCGCCACTaGTTGCTGCAGCATCAAAGG +
Preference number: 5 (lower is better)
Translates to: DTTTLAPVSSGRSLFVNFWHYRH*LLQHQR
Trigger: CCTTTGATGCTGCAGCAACAAGTGGCGGTAGTGCCA...GAAATTAACAAAAAGTGATCGACCAGAGCTAACAGGTGCCAAAGTGGTGGTATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
CDS-3UTR CAA 90 bp TCCTCAGAGAGATGTGCAGAAGATGCCAGAATGTCTAAGATTGGAACATGGTATTGGCACTACCGCCACTaGTTGCTGCAGCATCAAAGG +
Preference number: 5 (lower is better)
Translates to: SSERCAEDARMSKIGTWYWHYRH*LLQHQR
Trigger: CCTTTGATGCTGCAGCAACAAGTGGCGGTAGTGCCA...ATACCATGTTCCAATCTTAGACATTCTGGCATCTTCTGCACATCTCTCTGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560899.5
CDS CCA 90 bp GACCAACATGCAGAACCTCCGTCTCTACACCAGATACCACCACTTTaGCACCTGTTAGCTCTGGTCGATCACTTTTTGTTAATTTCTGGT +
Preference number: 5 (lower is better)
Translates to: DQHAEPPSLHQIPPL*HLLALVDHFLLISG
Trigger: ACCAGAAATTAACAAAAAGTGATCGACCAGAGCTAACAGGTGCCAAAGTGGTGGTATCTGGTGTAGAGACGGAGGTTCTGCATGTTGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560345.5
CDS-3UTR CAA 90 bp AGTTTGCCCTTCAACAATGAGATTAGTAGGTTGATTAGGCTGGTGGAGACAATCCACTACCGCCACTTGTaGCTGCAGCATCAAAGGATG +
Preference number: 5 (lower is better)
Translates to: SLPFNNEISRLIRLVETIHYRHL*LQHQRM
Trigger: CATCCTTTGATGCTGCAGCAACAAGTGGCGGTAGTG...GATTGTCTCCACCAGCCTAATCAACCTACTAATCTCATTGTTGAAGGGCAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433983.6
ENST00000557943.6
CDS-3UTR CAA 90 bp TCCTCAGAGAGATGTGCAGAAGATGCCAGAATGTCTAAGATTGGAACATGGTATCACTACCGCCACTTGTaGCTGCAGCATCAAAGGATG +
Preference number: 5 (lower is better)
Translates to: SSERCAEDARMSKIGTWYHYRHL*LQHQRM
Trigger: CATCCTTTGATGCTGCAGCAACAAGTGGCGGTAGTG...ATACCATGTTCCAATCTTAGACATTCTGGCATCTTCTGCACATCTCTCTGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560899.5
CDS-3UTR CAA 90 bp GGTTCCTCAGAGAGATGTGCAGAAGATGCCAGAATGTCTAAGATTGGAACATGGCCACTGGTGAAGTACTaGATGCCTTTTCTGAACTGG +
Preference number: 5 (lower is better)
Translates to: GSSERCAEDARMSKIGTWPLVKY*MPFLNW
Trigger: CCAGTTCAGAAAAGGCATCAAGTACTTCACCAGTGG...CCATGTTCCAATCTTAGACATTCTGGCATCTTCTGCACATCTCTCTGAGGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560899.5
CDS-3UTR CAA 90 bp CGACCACCAGATACCACCACTTTGGCACCTGTTAGCTCTGGTCGATCACTTTTTCTGGTCGATCACTTTTaGTTAATTTCTGGTCAAGCC +
Preference number: 5 (lower is better)
Translates to: RPPDTTTLAPVSSGRSLFLVDHF*LISGQA
Trigger: GGCTTGACCAGAAATTAACAAAAAGTGATCGACCAG...AAAAAGTGATCGACCAGAGCTAACAGGTGCCAAAGTGGTGGTATCTGGTGGTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
CDS-3UTR CAA 90 bp TCCTCAGAGAGATGTGCAGAAGATGCCAGAATGTCTAAGATTGGAACATGGTATCCAGATACCACCACTTaGGCACCTGTTAGCTCTGGT +
Preference number: 5 (lower is better)
Translates to: SSERCAEDARMSKIGTWYPDTTT*APVSSG
Trigger: ACCAGAGCTAACAGGTGCCAAAGTGGTGGTATCTGG...ATACCATGTTCCAATCTTAGACATTCTGGCATCTTCTGCACATCTCTCTGAGGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560899.5
CDS-3UTR CAA 90 bp AGGGGTTCCTCAGAGAGATGTGCAGAAGATGCCAGAATGTCTAAGATTGGAACATCCAGAGAAACATGCTaGCTGTCTTTCATCCCAGCT +
Preference number: 5 (lower is better)
Translates to: RGSSERCAEDARMSKIGTSRETC*LSFIPA
Trigger: AGCTGGGATGAAAGACAGCAAGCATGTTTCTCTGGA...TGTTCCAATCTTAGACATTCTGGCATCTTCTGCACATCTCTCTGAGGAACCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560899.5
CDS GCA 90 bp ATTGCAATACTTACTGGTGCTACTATTTTTCCCGTCTGTCCAACTTaGATGTCATTGGGAACAAAGCCAGCATCAACAGCAGCACGGGAA +
Preference number: 5 (lower is better)
Translates to: IAILTGATIFPVCPT*MSLGTKPASTAARE
Trigger: TTCCCGTGCTGCTGTTGATGCTGGCTTTGTTCCCAATGACATGCAAGTTGGACAGACGGGAAAAATAGTAGCACCAGTAAGTATTGCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558803.1
ENST00000559758.5
CDS-3UTR CAA 90 bp GTTCTTTCCGAAGGCAGATGCTCCAGCACAGATGTGTGTGTAATTGAACTGCTTGTGCTAGGGAATCATTaGCATGCTCAGCTATTACCA +
Preference number: 5 (lower is better)
Translates to: VLSEGRCSSTDVCVIELLVLGNH*HAQLLP
Trigger: TGGTAATAGCTGAGCATGCAAATGATTCCCTAGCAC...AAGCAGTTCAATTACACACACATCTGTGCTGGAGCATCTGCCTTCGGAAAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267950.12
ENST00000560044.5
ENST00000560309.5
CDS-3UTR CAA 90 bp GATTGCAATGATGTCAGAAATCGGGGCAACCTCAAGTTTGGCTGCTACTCTGGGAATGTGTCAGGTGACTaGATTGCAATGATGTCAGAA +
Preference number: 5 (lower is better)
Translates to: DCNDVRNRGNLKFGCYSGNVSGD*IAMMSE
Trigger: TTCTGACATCATTGCAATCAAGTCACCTGACACATT...CCCAGAGTAGCAGCCAAACTTGAGGTTGCCCCGATTTCTGACATCATTGCAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267950.12
ENST00000560044.5
ENST00000560309.5
CDS-3UTR CAA 90 bp TGTTGCTGCAGCATCAAAGGATGTTCCACGGACAGAAAACACTTTCACTTTCTCCCACTGGTGAAGTACTaGATGCCTTTTCTGAACTGG +
Preference number: 5 (lower is better)
Translates to: CCCSIKGCSTDRKHFHFLPLVKY*MPFLNW
Trigger: CCAGTTCAGAAAAGGCATCAAGTACTTCACCAGTGG...GAGAAAGTGAAAGTGTTTTCTGTCCGTGGAACATCCTTTGATGCTGCAGCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
CDS-3UTR CAA 90 bp AATGAGATTAGTAGGTTGATTAGGCTGGTGGAGACAATCATGTTTACAATCTTCTACTTTACAGAGATCTaGTGCCACCGCCCGCCGGAG +
Preference number: 5 (lower is better)
Translates to: NEISRLIRLVETIMFTIFYFTEI*CHRPPE
Trigger: CTCCGGCGGGCGGTGGCACAAGATCTCTGTAAAGTA...GAAGATTGTAAACATGATTGTCTCCACCAGCCTAATCAACCTACTAATCTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433983.6
CDS-3UTR CAA 90 bp AATGAGATTAGTAGGTTGATTAGGCTGGTGGAGACAATCATGTTTACAATCTTCGGGGCAACCTCAAGTTaGGCTGCTACTCTGGGCAAA +
Preference number: 5 (lower is better)
Translates to: NEISRLIRLVETIMFTIFGATSS*AATLGK
Trigger: TTTGCCCAGAGTAGCAGCCAAACTTGAGGTTGCCCC...GAAGATTGTAAACATGATTGTCTCCACCAGCCTAATCAACCTACTAATCTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433983.6
ENST00000557943.6
CDS-3UTR CAA 90 bp CTTTCCGAAGGCAGATGCTCCAGCACAGATGTGTGTGTAATTGAACTGCTTCTGAATGTGTCAGGTGACTaGATTGCAATGATGTCAGAA +
Preference number: 5 (lower is better)
Translates to: LSEGRCSSTDVCVIELLLNVSGD*IAMMSE
Trigger: TTCTGACATCATTGCAATCAAGTCACCTGACACATT...CAGAAGCAGTTCAATTACACACACATCTGTGCTGGAGCATCTGCCTTCGGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267950.12
ENST00000560044.5
ENST00000560309.5
CDS-3UTR CAA 90 bp AAATTTACCTTAAGCCAACTAAATACATGGAGCTGGGTCAGGTTTAAGTCAGGTCACTACCGCCACTTGTaGCTGCAGCATCAAAGGATG +
Preference number: 5 (lower is better)
Translates to: KFTLSQLNTWSWVRFKSGHYRHL*LQHQRM
Trigger: CATCCTTTGATGCTGCAGCAACAAGTGGCGGTAGTG...ACCTGACTTAAACCTGACCCAGCTCCATGTATTTAGTTGGCTTAAGGTAAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS-3UTR CAA 90 bp TTGTTGCTGCAGCATCAAAGGATGTTCCACGGACAGAAAACACTTTCACTTTCTTCCCGTCTGTCCAACTaGCATGTCATTGGGAACAAA +
Preference number: 5 (lower is better)
Translates to: LLLQHQRMFHGQKTLSLSSRLSN*HVIGNK
Trigger: TTTGTTCCCAATGACATGCAAGTTGGACAGACGGGA...AGAAAGTGAAAGTGTTTTCTGTCCGTGGAACATCCTTTGATGCTGCAGCAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
CDS-3UTR CAA 90 bp AGAGATGTGCAGAAGATGCCAGAATGTCTAAGATTGGAACATGGTATAGTCCAGTCCCGTCTGTCCAACTaGCATGTCATTGGGAACAAA +
Preference number: 5 (lower is better)
Translates to: RDVQKMPECLRLEHGIVQSRLSN*HVIGNK
Trigger: TTTGTTCCCAATGACATGCAAGTTGGACAGACGGGA...CTGGACTATACCATGTTCCAATCTTAGACATTCTGGCATCTTCTGCACATCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560899.5
CDS GCA 90 bp GAACATGGTATAGTCCAGGTAACTGCTAATCCAGAGAAACATGCTTaGTGTCTTTCATCCCAGCTAAATGTTGGATGGCTCCAGATATTC +
Preference number: 5 (lower is better)
Translates to: EHGIVQVTANPEKHA*CLSSQLNVGWLQIF
Trigger: GAATATCTGGAGCCATCCAACATTTAGCTGGGATGAAAGACAGCAAGCATGTTTCTCTGGATTAGCAGTTACCTGGACTATACCATGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560899.5
CDS-3UTR CAA 90 bp ACAATCATGTTTACAATCTTCCTAAAACATAGAGCTCTCCATGAACAAGAAAGGTGGCACTACCGCCACTaGTTGCTGCAGCATCAAAGG +
Preference number: 5 (lower is better)
Translates to: TIMFTIFLKHRALHEQERWHYRH*LLQHQR
Trigger: CCTTTGATGCTGCAGCAACAAGTGGCGGTAGTGCCA...CCTTTCTTGTTCATGGAGAGCTCTATGTTTTAGGAAGATTGTAAACATGATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433983.6
ENST00000557943.6
CDS-3UTR CAA 90 bp GTTGCTGCAGCATCAAAGGATGTTCCACGGACAGAAAACACTTTCACTTTCTCACTGGTCGATCACTTTTaGTTAATTTCTGGTCAAGCC +
Preference number: 5 (lower is better)
Translates to: VAAASKDVPRTENTFTFSLVDHF*LISGQA
Trigger: GGCTTGACCAGAAATTAACAAAAAGTGATCGACCAG...TGAGAAAGTGAAAGTGTTTTCTGTCCGTGGAACATCCTTTGATGCTGCAGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
CDS-3UTR CAA 90 bp AGTAGGTTGATTAGGCTGGTGGAGACAATCATGTTTACAATCTTCCTAAAACATCCAGATACCACCACTTaGGCACCTGTTAGCTCTGGT +
Preference number: 5 (lower is better)
Translates to: SRLIRLVETIMFTIFLKHPDTTT*APVSSG
Trigger: ACCAGAGCTAACAGGTGCCAAAGTGGTGGTATCTGG...ATGTTTTAGGAAGATTGTAAACATGATTGTCTCCACCAGCCTAATCAACCTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433983.6
ENST00000557943.6
CDS-3UTR CAA 90 bp AAATTTACCTTAAGCCAACTAAATACATGGAGCTGGGTCAGGTTTAAGTCAGGTGCCACCTTGTCACATTaGGTTCCAGCTACTAAGCAG +
Preference number: 5 (lower is better)
Translates to: KFTLSQLNTWSWVRFKSGATLSH*VPATKQ
Trigger: CTGCTTAGTAGCTGGAACCAAATGTGACAAGGTGGC...ACCTGACTTAAACCTGACCCAGCTCCATGTATTTAGTTGGCTTAAGGTAAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS GCA 90 bp ATGCCAGAATGTCTAAGATTGGAACATGGTATAGTCCAGGTAACTTaGTGTCTTTCATCCCAGCTAAATGTTGGATGGCTCCAGATATTC +
Preference number: 5 (lower is better)
Translates to: MPECLRLEHGIVQVT*CLSSQLNVGWLQIF
Trigger: GAATATCTGGAGCCATCCAACATTTAGCTGGGATGAAAGACAGCAAGTTACCTGGACTATACCATGTTCCAATCTTAGACATTCTGGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565910.5
CDS CCA 90 bp CCAGAGAAACATGCTTGCTGTCTTTCATCCCAGCTAAATGTTGGATaGCTCCAGATATTCCAACAGCAATATAAAGTTCTGGTGCTACTA +
Preference number: 5 (lower is better)
Translates to: PEKHACCLSSQLNVG*LQIFQQQYKVLVLL
Trigger: TAGTAGCACCAGAACTTTATATTGCTGTTGGAATATCTGGAGCCATCCAACATTTAGCTGGGATGAAAGACAGCAAGCATGTTTCTCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560899.5
CDS CCA 90 bp TCAGAGAGATGTGCAGAAGATGCCAGAATGTCTAAGATTGGAACATaGTATAGTCCAGGTAACTTGCTGTCTTTCATCCCAGCTAAATGT +
Preference number: 5 (lower is better)
Translates to: SERCAEDARMSKIGT*YSPGNLLSFIPAKC
Trigger: ACATTTAGCTGGGATGAAAGACAGCAAGTTACCTGGACTATACCATGTTCCAATCTTAGACATTCTGGCATCTTCTGCACATCTCTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565910.5
CDS-3UTR CAA 90 bp CCTCAGAGAGATGTGCAGAAGATGCCAGAATGTCTAAGATTGGAACATGGTATACTGGTCGATCACTTTTaGTTAATTTCTGGTCAAGCC +
Preference number: 5 (lower is better)
Translates to: PQRDVQKMPECLRLEHGILVDHF*LISGQA
Trigger: GGCTTGACCAGAAATTAACAAAAAGTGATCGACCAG...TATACCATGTTCCAATCTTAGACATTCTGGCATCTTCTGCACATCTCTCTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560899.5
CDS-3UTR CAA 90 bp GTTGCTGCAGCATCAAAGGATGTTCCACGGACAGAAAACACTTTCACTTTCTCATACTTTACAGAGATCTaGTGCCACCTTGTCACATTT +
Preference number: 5 (lower is better)
Translates to: VAAASKDVPRTENTFTFSYFTEI*CHLVTF
Trigger: AAATGTGACAAGGTGGCACAAGATCTCTGTAAAGTA...TGAGAAAGTGAAAGTGTTTTCTGTCCGTGGAACATCCTTTGATGCTGCAGCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560044.5
CDS-3UTR CAA 90 bp AGAGATGTGCAGAAGATGCCAGAATGTCTAAGATTGGAACATGGTATAGTCCAGAATGTGTCAGGTGACTaGATTGCAATGATGTCAGAA +
Preference number: 5 (lower is better)
Translates to: RDVQKMPECLRLEHGIVQNVSGD*IAMMSE
Trigger: TTCTGACATCATTGCAATCAAGTCACCTGACACATT...CTGGACTATACCATGTTCCAATCTTAGACATTCTGGCATCTTCTGCACATCTCT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560899.5
CDS-3UTR CAA 90 bp GTGGAGACAATCATGTTTACAATCTTCCTAAAACATAGAGCTCTCCATGAACAACCACTGGTGAAGTACTaGATGCCTTTTCTGAACTGG +
Preference number: 5 (lower is better)
Translates to: VETIMFTIFLKHRALHEQPLVKY*MPFLNW
Trigger: CCAGTTCAGAAAAGGCATCAAGTACTTCACCAGTGG...TTGTTCATGGAGAGCTCTATGTTTTAGGAAGATTGTAAACATGATTGTCTCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433983.6
ENST00000557943.6
CDS-3UTR CAA 90 bp TTCAACAATGAGATTAGTAGGTTGATTAGGCTGGTGGAGACAATCATGTTTACAGAGCCACCAGAACTTTaGCTATGCCTGCTACTTTAC +
Preference number: 5 (lower is better)
Translates to: FNNEISRLIRLVETIMFTEPPEL*LCLLLY
Trigger: GTAAAGTAGCAGGCATAGCAAAAGTTCTGGTGGCTC...TGTAAACATGATTGTCTCCACCAGCCTAATCAACCTACTAATCTCATTGTTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433983.6
ENST00000557943.6
CDS-3UTR CAA 90 bp AGTAGGTTGATTAGGCTGGTGGAGACAATCATGTTTACAATCTTCCTAAAACATAGATCTTGTGCCACCTaGTCACATTTGGTTCCAGCT +
Preference number: 5 (lower is better)
Translates to: SRLIRLVETIMFTIFLKHRSCAT*SHLVPA
Trigger: AGCTGGAACCAAATGTGACAAGGTGGCACAAGATCT...ATGTTTTAGGAAGATTGTAAACATGATTGTCTCCACCAGCCTAATCAACCTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS TCA 90 bp ATGGTACTGGCTAACTGCTCAGGAACACTGAGTAAGGTAAATCACTaGGATCACTGTTCAACAAATACATACAGTACTTATCCCCATAAC +
Preference number: 5 (lower is better)
Translates to: MVLANCSGTLSKVNH*DHCSTNTYSTYPHN
Trigger: GTTATGGGGATAAGTACTGTATGTATTTGTTGAACAGTGATCTCAGTGATTTACCTTACTCAGTGTTCCTGAGCAGTTAGCCAGTACCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558803.1
ENST00000559758.5
CDS CCA 90 bp GATGTACAATTACCTTGCTGTCTTTCATCCCAGCTAAATGTTGGATaGCTCCAGATATTCCAACAGCAATATAAAGTTCTGGTGCTACTA +
Preference number: 5 (lower is better)
Translates to: DVQLPCCLSSQLNVG*LQIFQQQYKVLVLL
Trigger: TAGTAGCACCAGAACTTTATATTGCTGTTGGAATATCTGGAGCCATCCAACATTTAGCTGGGATGAAAGACAGCAAGGTAATTGTACATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559075.5
CDS-3UTR CAA 90 bp CTTTTTGTTAATTTCTGGTCAAGCCACTCTGATATTTCCACTGGTGAAGTACTTTTCCTCTTGTCACATTaGGTTCCAGCTACTAAGCAG +
Preference number: 5 (lower is better)
Translates to: LFVNFWSSHSDISTGEVLFLLSH*VPATKQ
Trigger: CTGCTTAGTAGCTGGAACCAAATGTGACAAGAGGAA...AAGTACTTCACCAGTGGAAATATCAGAGTGGCTTGACCAGAAATTAACAAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000267950.12
CDS-3UTR CAA 90 bp ATTAGTAGGTTGATTAGGCTGGTGGAGACAATCATGTTTACAATCTTCCTAAAATCCCGTCTGTCCAACTaGCATGTCATTGGGAACAAA +
Preference number: 5 (lower is better)
Translates to: ISRLIRLVETIMFTIFLKSRLSN*HVIGNK
Trigger: TTTGTTCCCAATGACATGCAAGTTGGACAGACGGGA...TTTTAGGAAGATTGTAAACATGATTGTCTCCACCAGCCTAATCAACCTACTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433983.6
ENST00000557943.6
CDS-3UTR CAA 90 bp CCATGCTTTCCAATGATTGTTATAATACCCACAAATATCTGTGATTTCAGTGGAGTGCTAGGGAATCATTaGCATGCTCAGCTATTACCA +
Preference number: 5 (lower is better)
Translates to: PCFPMIVIIPTNICDFSGVLGNH*HAQLLP
Trigger: TGGTAATAGCTGAGCATGCAAATGATTCCCTAGCAC...TCCACTGAAATCACAGATATTTGTGGGTATTATAACAATCATTGGAAAGCATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000557943.6
CDS-3UTR CAA 90 bp GATCACTTTTTGTTAATTTCTGGTCAAGCCACTCTGATATTTCCACTGGTGAAGAATGTGTCAGGTGACTaGATTGCAATGATGTCAGAA +
Preference number: 5 (lower is better)
Translates to: DHFLLISGQATLIFPLVKNVSGD*IAMMSE
Trigger: TTCTGACATCATTGCAATCAAGTCACCTGACACATT...CTTCACCAGTGGAAATATCAGAGTGGCTTGACCAGAAATTAACAAAAAGTGATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267950.12
ENST00000560044.5
CDS-3UTR CAA 90 bp ACAATCATGTTTACAATCTTCCTAAAACATAGAGCTCTCCATGAACAAGAAAGGATTGCCACAATTGTCTaGCTGTCTTTCATCCCAGCT +
Preference number: 5 (lower is better)
Translates to: TIMFTIFLKHRALHEQERIATIV*LSFIPA
Trigger: AGCTGGGATGAAAGACAGCAAGACAATTGTGGCAAT...CCTTTCTTGTTCATGGAGAGCTCTATGTTTTAGGAAGATTGTAAACATGATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433983.6
ENST00000557943.6
CDS-3UTR CAA 90 bp TTCAACAATGAGATTAGTAGGTTGATTAGGCTGGTGGAGACAATCATGTTTACAAATGAGATTAGTAGGTaGATTAGGCTGGTGGAGACA +
Preference number: 5 (lower is better)
Translates to: FNNEISRLIRLVETIMFTNEISR*IRLVET
Trigger: TGTCTCCACCAGCCTAATCAACCTACTAATCTCATT...TGTAAACATGATTGTCTCCACCAGCCTAATCAACCTACTAATCTCATTGTTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433983.6
ENST00000557943.6
CDS-3UTR CAA 90 bp AGTAGGTTGATTAGGCTGGTGGAGACAATCATGTTTACAATCTTCCTAAAACATAATGAGATTAGTAGGTaGATTAGGCTGGTGGAGACA +
Preference number: 5 (lower is better)
Translates to: SRLIRLVETIMFTIFLKHNEISR*IRLVET
Trigger: TGTCTCCACCAGCCTAATCAACCTACTAATCTCATT...ATGTTTTAGGAAGATTGTAAACATGATTGTCTCCACCAGCCTAATCAACCTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433983.6
ENST00000557943.6
CDS-3UTR CAA 90 bp TGTAGCTCTCCATGCTTTCCAATGATTGTTATAATACCCACAAATATCTGTGATTATAGTCCAGGTAACTaGCTGTCTTTCATCCCAGCT +
Preference number: 5 (lower is better)
Translates to: CSSPCFPMIVIIPTNICDYSPGN*LSFIPA
Trigger: AGCTGGGATGAAAGACAGCAAGTTACCTGGACTATA...ATCACAGATATTTGTGGGTATTATAACAATCATTGGAAAGCATGGAGAGCTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565910.5
CDS GCA 90 bp AATGTGGAAACGTTTTCTTTTAACATCACTGATGTACAATTACCTTaGTGTCTTTCATCCCAGCTAAATGTTGGATGGCTCCAGATATTC +
Preference number: 5 (lower is better)
Translates to: NVETFSFNITDVQLP*CLSSQLNVGWLQIF
Trigger: GAATATCTGGAGCCATCCAACATTTAGCTGGGATGAAAGACAGCAAGGTAATTGTACATCAGTGATGTTAAAAGAAAACGTTTCCACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559075.5
CDS-3UTR CAA 90 bp AATGAGATTAGTAGGTTGATTAGGCTGGTGGAGACAATCATGTTTACAATCTTCAATGTGTCAGGTGACTaGATTGCAATGATGTCAGAA +
Preference number: 5 (lower is better)
Translates to: NEISRLIRLVETIMFTIFNVSGD*IAMMSE
Trigger: TTCTGACATCATTGCAATCAAGTCACCTGACACATT...GAAGATTGTAAACATGATTGTCTCCACCAGCCTAATCAACCTACTAATCTCATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433983.6
ENST00000557943.6
CDS-3UTR CAA 90 bp TGTAGCTCTCCATGCTTTCCAATGATTGTTATAATACCCACAAATATCTGTGATCTGGTCGATCACTTTTaGTTAATTTCTGGTCAAGCC +
Preference number: 5 (lower is better)
Translates to: CSSPCFPMIVIIPTNICDLVDHF*LISGQA
Trigger: GGCTTGACCAGAAATTAACAAAAAGTGATCGACCAG...ATCACAGATATTTGTGGGTATTATAACAATCATTGGAAAGCATGGAGAGCTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267950.12
ENST00000433983.6
ENST00000557943.6
CDS-3UTR CAA 90 bp CCATGCTTTCCAATGATTGTTATAATACCCACAAATATCTGTGATTTCAGTGGATACTTTACAGAGATCTaGTGCCACCTTGTCACATTT +
Preference number: 5 (lower is better)
Translates to: PCFPMIVIIPTNICDFSGYFTEI*CHLVTF
Trigger: AAATGTGACAAGGTGGCACAAGATCTCTGTAAAGTA...TCCACTGAAATCACAGATATTTGTGGGTATTATAACAATCATTGGAAAGCATGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS-3UTR CAA 90 bp TTCAACAATGAGATTAGTAGGTTGATTAGGCTGGTGGAGACAATCATGTTTACATTTTTAACTCTGCACTaGCCAATTCAGTTACCTTCT +
Preference number: 5 (lower is better)
Translates to: FNNEISRLIRLVETIMFTFLTLH*PIQLPS
Trigger: AGAAGGTAACTGAATTGGCAAGTGCAGAGTTAAAAA...TGTAAACATGATTGTCTCCACCAGCCTAATCAACCTACTAATCTCATTGTTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557943.6
CDS GCA 72 bp CGCTTCCGCCGCAACCTCGGCCTTACAGCAGCCCCGTaGCCGGCCAACTGGCGCCGCCTCAGCCAGTCACCT +
Preference number: 6 (lower is better)
Translates to: RFRRNLGLTAAP*PANWRRLSQSP
Trigger: AGGTGACTGGCTGAGGCGGCGCCAGTTGGCCGGGCACGGGGCTGCTGTAAGGCCGAGGTTGCGGCGGAAGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000557943.6
ENST00000560044.5
ENST00000560726.5
CDS GCA 72 bp CAAAATCAATGGTGTCAGTTCCTCGCCCGCCGGAGCTaGCCCGGAGCCGCCGCTCGGAACATGGTCTCCGCT +
Preference number: 6 (lower is better)
Translates to: QNQWCQFLARRS*PGAAARNMVSA
Trigger: AGCGGAGACCATGTTCCGAGCGGCGGCTCCGGGGCAGCTCCGGCGGGCGAGGAACTGACACCATTGATTTTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560726.5
ENST00000560899.5
CDS CAA 90 bp GGTGACTTGATTGCAATGATGTCAGAAATCGGGGCAACCTCAAGTTaGGCTGCTACTCTGGGCAAAAGGTTCGCCCGCCGGAGCTGCCCC +
Preference number: 6 (lower is better)
Translates to: GDLIAMMSEIGATSS*AATLGKRFARRSCP
Trigger: GGGGCAGCTCCGGCGGGCGAACCTTTTGCCCAGAGTAGCAGCCAAACTTGAGGTTGCCCCGATTTCTGACATCATTGCAATCAAGTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559602.5
CDS GCA 72 bp AATGATGTCAGAAATCGGGGCAACCTCAAGTTTGGCTaGTACTCTGGGCAAAAGGTTCGCCCGCCGGAGCTG +
Preference number: 6 (lower is better)
Translates to: NDVRNRGNLKFG*YSGQKVRPPEL
Trigger: CAGCTCCGGCGGGCGAACCTTTTGCCCAGAGTAGCAGCCAAACTTGAGGTTGCCCCGATTTCTGACATCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559602.5
CDS TCA 72 bp GAATCATTTGCATGCTCAGCTATTACCAGGGTACTCTaGAATCGTAGCAATGAGGCCGCCCGCCGGAGCTGC +
Preference number: 6 (lower is better)
Translates to: ESFACSAITRVL*NRSNEAARRSC
Trigger: GCAGCTCCGGCGGGCGGCCTCATTGCTACGATTTCAGAGTACCCTGGTAATAGCTGAGCATGCAAATGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267950.12
ENST00000557943.6
ENST00000559075.5
ENST00000559386.1
ENST00000560595.5
ENST00000561092.1
CDS GCA 72 bp CACATCATGCTGAGCCACCAGAACTTTTGCTATGCCTaGTACTTTACAGAGATCTTGTGCCACCGCCCGCCG +
Preference number: 6 (lower is better)
Translates to: HIMLSHQNFCYA*YFTEILCHRPP
Trigger: CGGCGGGCGGTGGCACAAGATCTCTGTAAAGTAGCAGGCATAGCAAAAGTTCTGGTGGCTCAGCATGATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433983.6
CDS CCA 72 bp TGTGTAATTGAACTGCTTCTGAGTTGCCAAAATCAATaGTGTCAGTTCCTCGCCCGCCGGAGCTGCCCCGGA +
Preference number: 6 (lower is better)
Translates to: CVIELLLSCQNQ*CQFLARRSCPG
Trigger: TCCGGGGCAGCTCCGGCGGGCGAGGAACTGACACCATTGATTTTGGCAACTCAGAAGCAGTTCAATTACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000560726.5
ENST00000560899.5
CDS CAA 72 bp ATTGCAATGATGTCAGAAATCGGGGCAACCTCAAGTTaGGCTGCTACTCTGGGCAAAAGGTTCGCCCGCCGG +
Preference number: 6 (lower is better)
Translates to: IAMMSEIGATSS*AATLGKRFARR
Trigger: CCGGCGGGCGAACCTTTTGCCCAGAGTAGCAGCCAAACTTGAGGTTGCCCCGATTTCTGACATCATTGCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559602.5
CDS CAA 90 bp CTGGAAGTAGGCCTTTGTACACATCATGCTGAGCCACCAGAACTTTaGCTATGCCTGCTACTTTACAGAGATCTTGTGCCACCGCCCGCC +
Preference number: 6 (lower is better)
Translates to: LEVGLCTHHAEPPEL*LCLLLYRDLVPPPA
Trigger: GGCGGGCGGTGGCACAAGATCTCTGTAAAGTAGCAGGCATAGCAAAAGTTCTGGTGGCTCAGCATGATGTGTACAAAGGCCTACTTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433983.6
CDS CAA 72 bp GCAGCACGGGAAGCACCAACACCAGATACCACCACTTaGGCACCTGTTAGCTCTGGTCGATCACTTTTTGTT +
Preference number: 6 (lower is better)
Translates to: AAREAPTPDTTT*APVSSGRSLFV
Trigger: AACAAAAAGTGATCGACCAGAGCTAACAGGTGCCAAAGTGGTGGTATCTGGTGTTGGTGCTTCCCGTGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560595.5
CDS CAA 90 bp GTCCTTGGTGCTACTATTTTTCCCGTCTGTCCAACTTGCATGTCATaGGGAACAAAGCCAGCATCAACAGCAGCACGGGAAGCACCAACT +
Preference number: 6 (lower is better)
Translates to: VLGATIFPVCPTCMS*GTKPASTAAREAPT
Trigger: AGTTGGTGCTTCCCGTGCTGCTGTTGATGCTGGCTTTGTTCCCAATGACATGCAAGTTGGACAGACGGGAAAAATAGTAGCACCAAGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560816.5
CDS GCA 72 bp AGCACAGATGTGTGTGTAATTGAACTGCTTCTGAGTTaGCAAAATCAATGGTGTCAGTTCCTCGCCCGCCGG +
Preference number: 6 (lower is better)
Translates to: STDVCVIELLLS*QNQWCQFLARR
Trigger: CCGGCGGGCGAGGAACTGACACCATTGATTTTGGCAACTCAGAAGCAGTTCAATTACACACACATCTGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560726.5
ENST00000560899.5
CDS CCA 72 bp CAGCACGGGAAGCACCAACACCAGATACCACCACTTTaGCACCTGTTAGCTCTGGTCGATCACTTTTTGTTA +
Preference number: 6 (lower is better)
Translates to: QHGKHQHQIPPL*HLLALVDHFLL
Trigger: TAACAAAAAGTGATCGACCAGAGCTAACAGGTGCCAAAGTGGTGGTATCTGGTGTTGGTGCTTCCCGTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560595.5
CDS CAA 90 bp CTTACTGGTGCTACTATTTTTCCCGTCTGTCCAACTTGCATGTCATaGGGAACAAAGCCAGCATCAACAGCAGCACGGGAAGCACCAACT +
Preference number: 6 (lower is better)
Translates to: LTGATIFPVCPTCMS*GTKPASTAAREAPT
Trigger: AGTTGGTGCTTCCCGTGCTGCTGTTGATGCTGGCTTTGTTCCCAATGACATGCAAGTTGGACAGACGGGAAAAATAGTAGCACCAGTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558803.1
ENST00000559758.5
CDS CAA 90 bp AGTTCTGGTGCTACTATTTTTCCCGTCTGTCCAACTTGCATGTCATaGGGAACAAAGCCAGCATCAACAGCAGCACGGGAAGCACCAACA +
Preference number: 6 (lower is better)
Translates to: SSGATIFPVCPTCMS*GTKPASTAAREAPT
Trigger: TGTTGGTGCTTCCCGTGCTGCTGTTGATGCTGGCTTTGTTCCCAATGACATGCAAGTTGGACAGACGGGAAAAATAGTAGCACCAGAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560595.5
CDS CCA 72 bp GCAGAACCTCCGTCTCTACACCAGATACCACCACTTTaGCACCTGTTAGCTCTGGTCGATCACTTTTTGTTA +
Preference number: 6 (lower is better)
Translates to: AEPPSLHQIPPL*HLLALVDHFLL
Trigger: TAACAAAAAGTGATCGACCAGAGCTAACAGGTGCCAAAGTGGTGGTATCTGGTGTAGAGACGGAGGTTCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560345.5
CDS CAA 72 bp TGCAGAACCTCCGTCTCTACACCAGATACCACCACTTaGGCACCTGTTAGCTCTGGTCGATCACTTTTTGTT +
Preference number: 6 (lower is better)
Translates to: CRTSVSTPDTTT*APVSSGRSLFV
Trigger: AACAAAAAGTGATCGACCAGAGCTAACAGGTGCCAAAGTGGTGGTATCTGGTGTAGAGACGGAGGTTCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560345.5
CDS CAA 90 bp ATTTCTCTCTGTCCTTGGTGCTACTATTTTTCCCGTCTGTCCAACTaGCATGTCATTGGGAACAAAGCCAGCATCAACAGCAGCACGGGA +
Preference number: 6 (lower is better)
Translates to: ISLCPWCYYFSRLSN*HVIGNKASINSSTG
Trigger: TCCCGTGCTGCTGTTGATGCTGGCTTTGTTCCCAATGACATGCAAGTTGGACAGACGGGAAAAATAGTAGCACCAAGGACAGAGAGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560816.5
CDS CAA 90 bp GGGGTTCCTCAGAGAGATGTGCAGAAGATGCCAGAATGTCTAAGATaGGAACATGGTATAGTCCAGGTAACTTGCTGTCTTTCATCCCAG +
Preference number: 6 (lower is better)
Translates to: GVPQRDVQKMPECLR*EHGIVQVTCCLSSQ
Trigger: CTGGGATGAAAGACAGCAAGTTACCTGGACTATACCATGTTCCAATCTTAGACATTCTGGCATCTTCTGCACATCTCTCTGAGGAACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565910.5
CDS GCA 72 bp GTCCTTGGTGCTACTATTTTTCCCGTCTGTCCAACTTaGATGTCATTGGGAACAAAGCCAGCATCAACAGCA +
Preference number: 6 (lower is better)
Translates to: VLGATIFPVCPT*MSLGTKPASTA
Trigger: TGCTGTTGATGCTGGCTTTGTTCCCAATGACATGCAAGTTGGACAGACGGGAAAAATAGTAGCACCAAGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560816.5
CDS CAA 72 bp TGTCCTTGGTGCTACTATTTTTCCCGTCTGTCCAACTaGCATGTCATTGGGAACAAAGCCAGCATCAACAGC +
Preference number: 6 (lower is better)
Translates to: CPWCYYFSRLSN*HVIGNKASINS
Trigger: GCTGTTGATGCTGGCTTTGTTCCCAATGACATGCAAGTTGGACAGACGGGAAAAATAGTAGCACCAAGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560816.5
CDS CAA 90 bp TATTGCAATACTTACTGGTGCTACTATTTTTCCCGTCTGTCCAACTaGCATGTCATTGGGAACAAAGCCAGCATCAACAGCAGCACGGGA +
Preference number: 6 (lower is better)
Translates to: YCNTYWCYYFSRLSN*HVIGNKASINSSTG
Trigger: TCCCGTGCTGCTGTTGATGCTGGCTTTGTTCCCAATGACATGCAAGTTGGACAGACGGGAAAAATAGTAGCACCAGTAAGTATTGCAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558803.1
ENST00000559758.5
CDS GCA 72 bp CTTACTGGTGCTACTATTTTTCCCGTCTGTCCAACTTaGATGTCATTGGGAACAAAGCCAGCATCAACAGCA +
Preference number: 6 (lower is better)
Translates to: LTGATIFPVCPT*MSLGTKPASTA
Trigger: TGCTGTTGATGCTGGCTTTGTTCCCAATGACATGCAAGTTGGACAGACGGGAAAAATAGTAGCACCAGTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558803.1
ENST00000559758.5
CDS CCA 72 bp ACAAGAGCGAAACTCCATCACCAGATACCACCACTTTaGCACCTGTTAGCTCTGGTCGATCACTTTTTGTTA +
Preference number: 6 (lower is better)
Translates to: TRAKLHHQIPPL*HLLALVDHFLL
Trigger: TAACAAAAAGTGATCGACCAGAGCTAACAGGTGCCAAAGTGGTGGTATCTGGTGATGGAGTTTCGCTCTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559386.1
CDS CCA 72 bp TTGCAGGTGTTGATTTGCATTGGCGTGTTTCTCTTTTaGGAATGTGTAACCTGCTTCACGGCGATAAGCAGA +
Preference number: 6 (lower is better)
Translates to: LQVLICIGVFLF*ECVTCFTAISR
Trigger: TCTGCTTATCGCCGTGAAGCAGGTTACACATTCCCAAAAGAGAAACACGCCAATGCAAATCAACACCTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557975.5
CDS CAA 72 bp ACTTACTGGTGCTACTATTTTTCCCGTCTGTCCAACTaGCATGTCATTGGGAACAAAGCCAGCATCAACAGC +
Preference number: 6 (lower is better)
Translates to: TYWCYYFSRLSN*HVIGNKASINS
Trigger: GCTGTTGATGCTGGCTTTGTTCCCAATGACATGCAAGTTGGACAGACGGGAAAAATAGTAGCACCAGTAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558803.1
ENST00000559758.5
CDS CAA 72 bp AACAAGAGCGAAACTCCATCACCAGATACCACCACTTaGGCACCTGTTAGCTCTGGTCGATCACTTTTTGTT +
Preference number: 6 (lower is better)
Translates to: NKSETPSPDTTT*APVSSGRSLFV
Trigger: AACAAAAAGTGATCGACCAGAGCTAACAGGTGCCAAAGTGGTGGTATCTGGTGATGGAGTTTCGCTCTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559386.1
CDS CAA 72 bp ATTGCAGGTGTTGATTTGCATTGGCGTGTTTCTCTTTaGGGAATGTGTAACCTGCTTCACGGCGATAAGCAG +
Preference number: 6 (lower is better)
Translates to: IAGVDLHWRVSL*GMCNLLHGDKQ
Trigger: CTGCTTATCGCCGTGAAGCAGGTTACACATTCCCAAAAGAGAAACACGCCAATGCAAATCAACACCTGCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557975.5
CDS CAA 90 bp GGGGTTCCTCAGAGAGATGTGCAGAAGATGCCAGAATGTCTAAGATaGGAACATGGTATAGTCCAGGTAACTGCTAATCCAGAGAAACAT +
Preference number: 6 (lower is better)
Translates to: GVPQRDVQKMPECLR*EHGIVQVTANPEKH
Trigger: ATGTTTCTCTGGATTAGCAGTTACCTGGACTATACCATGTTCCAATCTTAGACATTCTGGCATCTTCTGCACATCTCTCTGAGGAACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557975.5
ENST00000560899.5
CDS TCA 72 bp CTCACCTGCATAAATAGTTCTCACAAATGTGTCAGGTaGCTTGATTGCAATGATGTCAGAAATCGGGGCAAC +
Preference number: 6 (lower is better)
Translates to: LTCINSSHKCVR*LDCNDVRNRGN
Trigger: GTTGCCCCGATTTCTGACATCATTGCAATCAAGTCACCTGACACATTTGTGAGAACTATTTATGCAGGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561092.1
CDS GCA 72 bp TGTCTAAGATTGGAACATGGTATAGTCCAGGTAACTTaGTGTCTTTCATCCCAGCTAAATGTTGGATGGCTC +
Preference number: 6 (lower is better)
Translates to: CLRLEHGIVQVT*CLSSQLNVGWL
Trigger: GAGCCATCCAACATTTAGCTGGGATGAAAGACAGCAAGTTACCTGGACTATACCATGTTCCAATCTTAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565910.5
CDS CCA 72 bp TGTGCAGAAGATGCCAGAATGTCTAAGATTGGAACATaGTATAGTCCAGGTAACTTGCTGTCTTTCATCCCA +
Preference number: 6 (lower is better)
Translates to: CAEDARMSKIGT*YSPGNLLSFIP
Trigger: TGGGATGAAAGACAGCAAGTTACCTGGACTATACCATGTTCCAATCTTAGACATTCTGGCATCTTCTGCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565910.5
CDS CAA 72 bp CAGAGAGATGTGCAGAAGATGCCAGAATGTCTAAGATaGGAACATGGTATAGTCCAGGTAACTGCTAATCCA +
Preference number: 6 (lower is better)
Translates to: QRDVQKMPECLR*EHGIVQVTANP
Trigger: TGGATTAGCAGTTACCTGGACTATACCATGTTCCAATCTTAGACATTCTGGCATCTTCTGCACATCTCTCTG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557975.5
ENST00000560899.5
CDS CAA 72 bp CAGAGAGATGTGCAGAAGATGCCAGAATGTCTAAGATaGGAACATGGTATAGTCCAGGTAACTTGCTGTCTT +
Preference number: 6 (lower is better)
Translates to: QRDVQKMPECLR*EHGIVQVTCCL
Trigger: AAGACAGCAAGTTACCTGGACTATACCATGTTCCAATCTTAGACATTCTGGCATCTTCTGCACATCTCTCTG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565910.5
CDS CAA 90 bp GATGCCAGAATGTCTAAGATTGGAACATGGTATAGTCCAGGTAACTaGCTGTCTTTCATCCCAGCTAAATGTTGGATGGCTCCAGATATT +
Preference number: 6 (lower is better)
Translates to: DARMSKIGTWYSPGN*LSFIPAKCWMAPDI
Trigger: AATATCTGGAGCCATCCAACATTTAGCTGGGATGAAAGACAGCAAGTTACCTGGACTATACCATGTTCCAATCTTAGACATTCTGGCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565910.5
CDS CAA 72 bp ATGTCTAAGATTGGAACATGGTATAGTCCAGGTAACTaGCTGTCTTTCATCCCAGCTAAATGTTGGATGGCT +
Preference number: 6 (lower is better)
Translates to: MSKIGTWYSPGN*LSFIPAKCWMA
Trigger: AGCCATCCAACATTTAGCTGGGATGAAAGACAGCAAGTTACCTGGACTATACCATGTTCCAATCTTAGACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565910.5
CDS TCA 72 bp AAAGGCACAAGAACAAACATTCTGAATTGCAGGTGTTaGTTTGCATTGGCGTGTTTCTCTTTTGGGAATGTG +
Preference number: 6 (lower is better)
Translates to: KGTRTNILNCRC*FALACFSFGNV
Trigger: CACATTCCCAAAAGAGAAACACGCCAATGCAAATCAACACCTGCAATTCAGAATGTTTGTTCTTGTGCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557975.5
CDS GCA 72 bp ACGTTTTCTTTTAACATCACTGATGTACAATTACCTTaGTGTCTTTCATCCCAGCTAAATGTTGGATGGCTC +
Preference number: 6 (lower is better)
Translates to: TFSFNITDVQLP*CLSSQLNVGWL
Trigger: GAGCCATCCAACATTTAGCTGGGATGAAAGACAGCAAGGTAATTGTACATCAGTGATGTTAAAAGAAAACGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559075.5
CDS CAA 72 bp TCTTTCAGTTCCCAGATCTACGTTAGTGTGAATGGCTaGACTACATGCATTGTAACTACATGGAAACATACA +
Preference number: 6 (lower is better)
Translates to: SFSSQIYVSVNG*TTCIVTTWKHT
Trigger: TGTATGTTTCCATGTAGTTACAATGCATGTAGTCAAGCCATTCACACTAACGTAGATCTGGGAACTGAAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559075.5
CDS GCA 72 bp CTGCTAATCCAGAGAAACATGCTACACACATTAAGATaGATAGTCAGAGACAATAAACAAGTTTCAAACGTG +
Preference number: 6 (lower is better)
Translates to: LLIQRNMLHTLR*IVRDNKQVSNV
Trigger: CACGTTTGAAACTTGTTTATTGTCTCTGACTATGCATCTTAATGTGTGTAGCATGTTTCTCTGGATTAGCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557975.5