Pregenerated sensors for ETF1 (Homo sapiens)
Ensembl gene IDs: ENSG00000120705Ensembl transcript IDs: ENST00000360541.10, ENST00000499810.6, ENST00000507939.5, ENST00000514005.1, ENST00000572514.5
Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GCCTGGTTCTCCTCATCCGGCCATGCGGCGCGGGGGCGTCCATCCTaGGGGGTCCGGGAACCAAGAGGGCACGGAGGGTGCCGGACGCGG | + |
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Preference number: 5 (lower is better) Translates to: AWFSSSGHAARGRPS*GVREPRGHGGCRTR Trigger: CCGCGTCCGGCACCCTCCGTGCCCTCTTGGTTCCCGGACCCCTCAGGATGGACGCCCCCGCGCCGCATGGCCGGATGAGGAGAACCAGGC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000499810.6 ENST00000572514.5 |
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| CDS GCA 90 bp | CTCATTGGTTTTAGGGGCACTTTGGCTTATCAAAGCTTTCATCAATaGTTCGCCCAGAGGGTTAACGTCCGCGGGCCGCCTCCAAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: LIGFRGTLAYQSFHQ*FAQRVNVRGPPPSS Trigger: AGAGCTTGGAGGCGGCCCGCGGACGTTAACCCTCTGGGCGAAGCATTGATGAAAGCTTTGATAAGCCAAAGTGCCCCTAAAACCAATGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000507939.5 |
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| CDS GCA 90 bp | CTCATTGGTTTTAGGGGCACTTTGGCTTATCAAAGCTTTCATCAATaGTTCGCCCAGAGGGTTAACGTCTGTGAATTGGGCCTTCAGTAC | + |
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Preference number: 5 (lower is better) Translates to: LIGFRGTLAYQSFHQ*FAQRVNVCELGLQY Trigger: GTACTGAAGGCCCAATTCACAGACGTTAACCCTCTGGGCGAAGCATTGATGAAAGCTTTGATAAGCCAAAGTGCCCCTAAAACCAATGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000514005.1 |
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| CDS CCA 90 bp | TGCACTCAGATTCTCTTCTTGTTCTCATTGGTTTTAGGGGCACTTTaGCTTATCAAAGCTTTCATCAATGCTTCGCCCAGAGGGTTAACG | + |
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Preference number: 5 (lower is better) Translates to: CTQILFLFSLVLGAL*LIKAFINASPRGLT Trigger: CGTTAACCCTCTGGGCGAAGCATTGATGAAAGCTTTGATAAGCCAAAGTGCCCCTAAAACCAATGAGAACAAGAAGAGAATCTGAGTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000507939.5 ENST00000514005.1 |
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| CDS TCA 72 bp | TCCTCCCCGGCGGCGGCTCCGCGGCGGCGGCGGCTCTaGCGTAGGACACCGGCTCCCTCTCTCCAGGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: SSPAAAPRRRRL*RRTPAPSLQAA Trigger: AGCTGCCTGGAGAGAGGGAGCCGGTGTCCTACGTCAGAGCCGCCGCCGCCGCGGAGCCGCCGCCGGGGAGGA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000360541.10 ENST00000499810.6 ENST00000507939.5 ENST00000572514.5 |
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| CDS TCA 72 bp | TCCTCATCCGGCCATGCGGCGCGGGGGCGTCCATCCTaGGGGGTCCGGGAACCAAGAGGGCACGGAGGGTGC | + |
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Preference number: 6 (lower is better) Translates to: SSSGHAARGRPS*GVREPRGHGGC Trigger: GCACCCTCCGTGCCCTCTTGGTTCCCGGACCCCTCAGGATGGACGCCCCCGCGCCGCATGGCCGGATGAGGA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000499810.6 ENST00000572514.5 |
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| CDS CAA 90 bp | GCCCCTGGGTCAGGGGCTACTACCCAGAGATCCAGAAGGCGGGAGTaGGCTAGTGCCTGGTTCTCCTCATCCGGCCATGCGGCGCGGGGG | + |
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Preference number: 6 (lower is better) Translates to: APGSGATTQRSRRRE*ASAWFSSSGHAARG Trigger: CCCCCGCGCCGCATGGCCGGATGAGGAGAACCAGGCACTAGCCAACTCCCGCCTTCTGGATCTCTGGGTAGTAGCCCCTGACCCAGGGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000499810.6 |
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| CDS CCA 72 bp | ACCCAGAGATCCAGAAGGCGGGAGTTGGCTAGTGCCTaGTTCTCCTCATCCGGCCATGCGGCGCGGGGGCGT | + |
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Preference number: 6 (lower is better) Translates to: TQRSRRRELASA*FSSSGHAARGR Trigger: ACGCCCCCGCGCCGCATGGCCGGATGAGGAGAACCAGGCACTAGCCAACTCCCGCCTTCTGGATCTCTGGGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000499810.6 |
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| CDS CCA 72 bp | TGCCAGAGATCCAGAAGGCGGGAGTTGGCTAGTGCCTaGTTCTCCTCATCCGGCCATGCGGCGCGGGGGCGT | + |
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Preference number: 6 (lower is better) Translates to: CQRSRRRELASA*FSSSGHAARGR Trigger: ACGCCCCCGCGCCGCATGGCCGGATGAGGAGAACCAGGCACTAGCCAACTCCCGCCTTCTGGATCTCTGGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000572514.5 |
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| CDS CCA 72 bp | CAGGGGCTACTACCCAGAGATCCAGAAGGCGGGAGTTaGCTAGTGCCTGGTTCTCCTCATCCGGCCATGCGG | + |
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Preference number: 6 (lower is better) Translates to: QGLLPRDPEGGS*LVPGSPHPAMR Trigger: CCGCATGGCCGGATGAGGAGAACCAGGCACTAGCCAACTCCCGCCTTCTGGATCTCTGGGTAGTAGCCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000499810.6 |
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| CDS CCA 72 bp | GCTGGTGCCATTGCCAGAGATCCAGAAGGCGGGAGTTaGCTAGTGCCTGGTTCTCCTCATCCGGCCATGCGG | + |
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Preference number: 6 (lower is better) Translates to: AGAIARDPEGGS*LVPGSPHPAMR Trigger: CCGCATGGCCGGATGAGGAGAACCAGGCACTAGCCAACTCCCGCCTTCTGGATCTCTGGCAATGGCACCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000572514.5 |
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| CDS CAA 90 bp | ATGATATCATGCTGGTGCCATTGCCAGAGATCCAGAAGGCGGGAGTaGGCTAGTGCCTGGTTCTCCTCATCCGGCCATGCGGCGCGGGGG | + |
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Preference number: 6 (lower is better) Translates to: MISCWCHCQRSRRRE*ASAWFSSSGHAARG Trigger: CCCCCGCGCCGCATGGCCGGATGAGGAGAACCAGGCACTAGCCAACTCCCGCCTTCTGGATCTCTGGCAATGGCACCAGCATGATATCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000572514.5 |
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| CDS CAA 72 bp | TCAGGGGCTACTACCCAGAGATCCAGAAGGCGGGAGTaGGCTAGTGCCTGGTTCTCCTCATCCGGCCATGCG | + |
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Preference number: 6 (lower is better) Translates to: SGATTQRSRRRE*ASAWFSSSGHA Trigger: CGCATGGCCGGATGAGGAGAACCAGGCACTAGCCAACTCCCGCCTTCTGGATCTCTGGGTAGTAGCCCCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000499810.6 |
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| CDS CAA 72 bp | TGCTGGTGCCATTGCCAGAGATCCAGAAGGCGGGAGTaGGCTAGTGCCTGGTTCTCCTCATCCGGCCATGCG | + |
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Preference number: 6 (lower is better) Translates to: CWCHCQRSRRRE*ASAWFSSSGHA Trigger: CGCATGGCCGGATGAGGAGAACCAGGCACTAGCCAACTCCCGCCTTCTGGATCTCTGGCAATGGCACCAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000572514.5 |
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| CDS GCA 72 bp | TTTAGGGGCACTTTGGCTTATCAAAGCTTTCATCAATaGTTCGCCCAGAGGGTTAACGTCCGCGGGCCGCCT | + |
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Preference number: 6 (lower is better) Translates to: FRGTLAYQSFHQ*FAQRVNVRGPP Trigger: AGGCGGCCCGCGGACGTTAACCCTCTGGGCGAAGCATTGATGAAAGCTTTGATAAGCCAAAGTGCCCCTAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507939.5 |
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| CDS GCA 72 bp | TTTAGGGGCACTTTGGCTTATCAAAGCTTTCATCAATaGTTCGCCCAGAGGGTTAACGTCTGTGAATTGGGC | + |
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Preference number: 6 (lower is better) Translates to: FRGTLAYQSFHQ*FAQRVNVCELG Trigger: GCCCAATTCACAGACGTTAACCCTCTGGGCGAAGCATTGATGAAAGCTTTGATAAGCCAAAGTGCCCCTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514005.1 |
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| CDS CAA 90 bp | CTGCACTCAGATTCTCTTCTTGTTCTCATTGGTTTTAGGGGCACTTaGGCTTATCAAAGCTTTCATCAATGCTTCGCCCAGAGGGTTAAC | + |
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Preference number: 6 (lower is better) Translates to: LHSDSLLVLIGFRGT*AYQSFHQCFAQRVN Trigger: GTTAACCCTCTGGGCGAAGCATTGATGAAAGCTTTGATAAGCCAAAGTGCCCCTAAAACCAATGAGAACAAGAAGAGAATCTGAGTGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000507939.5 ENST00000514005.1 |
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| CDS CAA 72 bp | GATTCTCTTCTTGTTCTCATTGGTTTTAGGGGCACTTaGGCTTATCAAAGCTTTCATCAATGCTTCGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: DSLLVLIGFRGT*AYQSFHQCFAQ Trigger: CTGGGCGAAGCATTGATGAAAGCTTTGATAAGCCAAAGTGCCCCTAAAACCAATGAGAACAAGAAGAGAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000507939.5 ENST00000514005.1 |
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| CDS CCA 72 bp | ATTCTCTTCTTGTTCTCATTGGTTTTAGGGGCACTTTaGCTTATCAAAGCTTTCATCAATGCTTCGCCCAGA | + |
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Preference number: 6 (lower is better) Translates to: ILFLFSLVLGAL*LIKAFINASPR Trigger: TCTGGGCGAAGCATTGATGAAAGCTTTGATAAGCCAAAGTGCCCCTAAAACCAATGAGAACAAGAAGAGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000507939.5 ENST00000514005.1 |
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