RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ETAA1 (Homo sapiens)

Ensembl gene IDs: ENSG00000143971

Ensembl transcript IDs: ENST00000272342.6, ENST00000462772.2, ENST00000644028.1, ENST00000645739.1

Found 233 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CGTGCTTTAGCCATTCTCCGAACCAGTGCTTCTTGTCTTTTTCTCTaGATTTCTTCAGGAGAACACTTTCTATTTTTCTCTTCTTCCTCT +
Preference number: 1 (lower is better)
Translates to: RALAILRTSASCLFL*ISSGEHFLFFSSSS
Trigger: AGAGGAAGAAGAGAAAAATAGAAAGTGTTCTCCTGAAGAAATTCAGAGAAAAAGACAAGAAGCACTGGTTCGGAGAATGGCTAAAGCACG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
3UTR CCA 90 bp TCTGTCTCTTCCACCTGGGTGACAGTAATTCTTCAAACCATGTTTTaGGCCAGTGCCATCTATTGTTTATGGTCAACATATAGTAACTAT +
Preference number: 1 (lower is better)
Translates to: SVSSTWVTVILQTMF*ASAIYCLWSTYSNY
Trigger: ATAGTTACTATATGTTGACCATAAACAATAGATGGCACTGGCCCAAAACATGGTTTGAAGAATTACTGTCACCCAGGTGGAAGAGACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462772.2
3UTR CCA 90 bp TATGGTCAACATATAGTAACTATTCAAGCGCAGGTTAAGGAAAAATaGCATACTTCCTTCAGAGAAGACACTAAGCAAAAATGTTCTCTG +
Preference number: 1 (lower is better)
Translates to: YGQHIVTIQAQVKEK*HTSFREDTKQKCSL
Trigger: CAGAGAACATTTTTGCTTAGTGTCTTCTCTGAAGGAAGTATGCCATTTTTCCTTAACCTGCGCTTGAATAGTTACTATATGTTGACCATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000462772.2
3UTR TCA 90 bp GGGCATACCAGTGTCAGTATACATTTATTTACTAGAAGATTTAGGTaGAAAGATCCCTACAGTTTGGTACTTCAAATCCTCAATGAATCA +
Preference number: 1 (lower is better)
Translates to: GHTSVSIHLFTRRFR*KDPYSLVLQILNES
Trigger: TGATTCATTGAGGATTTGAAGTACCAAACTGTAGGGATCTTTTCACCTAAATCTTCTAGTAAATAAATGTATACTGACACTGGTATGCCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462772.2
3UTR CCA 90 bp TGTGTTAAGGTTGCTCTGAGCTTCATCTGTTACAGTCTTATGGCATaGCTGATTAGTACTCAATTTCTTCTTATAAGTAGTAATTTCTGT +
Preference number: 1 (lower is better)
Translates to: CVKVALSFICYSLMA*LISTQFLLISSNFC
Trigger: ACAGAAATTACTACTTATAAGAAGAAATTGAGTACTAATCAGCCATGCCATAAGACTGTAACAGATGAAGCTCAGAGCAACCTTAACACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462772.2
ENST00000645739.1
3UTR-3UTR TCA 90 bp AAGCATCCTCCCTGCCTTACGCCCTCTAGTTGGACTTCTATTACTGGTTTAGCACTGAGATTACAGGAATaGGTCACCATGCCTGAGGAG +
Preference number: 2 (lower is better)
Translates to: KHPPCLTPSSWTSITGLALRLQE*VTMPEE
Trigger: CTCCTCAGGCATGGTGACTCATTCCTGTAATCTCAG...TGCTAAACCAGTAATAGAAGTCCAACTAGAGGGCGTAAGGCAGGGAGGATGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462772.2
3UTR-3UTR GCA 90 bp AAGCATCCTCCCTGCCTTACGCCCTCTAGTTGGACTTCTATTACTGGTTTAGCAATAAAGCATCCTCCCTaGCTTACGCCCTCTAGTTGG +
Preference number: 2 (lower is better)
Translates to: KHPPCLTPSSWTSITGLAIKHPP*LTPSSW
Trigger: CCAACTAGAGGGCGTAAGGCAGGGAGGATGCTTTAT...TGCTAAACCAGTAATAGAAGTCCAACTAGAGGGCGTAAGGCAGGGAGGATGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
3UTR-3UTR GCA 90 bp AAGCATCCTCCCTGCCTTACGCCCTCTAGTTGGACTTCTATTACTGGTTTAGCACTCAAGCAATCTTCCTaGCTCAGCCTTCCTCCCAAA +
Preference number: 2 (lower is better)
Translates to: KHPPCLTPSSWTSITGLALKQSS*LSLPPK
Trigger: TTTGGGAGGAAGGCTGAGGCAGGAAGATTGCTTGAG...TGCTAAACCAGTAATAGAAGTCCAACTAGAGGGCGTAAGGCAGGGAGGATGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462772.2
3UTR-3UTR TCA 90 bp CAAGCAGTAAGCAGGGAGGAGCTTAAGCAAGGACAGAGATATCCAAAGCATAGTGGAAGCTGGACCAGATaGCATATGAAGTTTCTGCCA +
Preference number: 2 (lower is better)
Translates to: QAVSREELKQGQRYPKHSGSWTR*HMKFLP
Trigger: TGGCAGAAACTTCATATGTCATCTGGTCCAGCTTCC...ACTATGCTTTGGATATCTCTGTCCTTGCTTAAGCTCCTCCCTGCTTACTGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
3UTR-3UTR CCA 90 bp AAGCATCCTCCCTGCCTTACGCCCTCTAGTTGGACTTCTATTACTGGTTTAGCACAGGCTAGAGATATGTaGTACAACATTCTCACGATG +
Preference number: 2 (lower is better)
Translates to: KHPPCLTPSSWTSITGLAQARDM*YNILTM
Trigger: CATCGTGAGAATGTTGTACCACATATCTCTAGCCTG...TGCTAAACCAGTAATAGAAGTCCAACTAGAGGGCGTAAGGCAGGGAGGATGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
3UTR-3UTR CCA 90 bp AAGCATCCTCCCTGCCTTACGCCCTCTAGTTGGACTTCTATTACTGGTTTAGCACTTCAAACCATGTTTTaGGCCAGTGCCATCTATTGT +
Preference number: 2 (lower is better)
Translates to: KHPPCLTPSSWTSITGLALQTMF*ASAIYC
Trigger: ACAATAGATGGCACTGGCCCAAAACATGGTTTGAAG...TGCTAAACCAGTAATAGAAGTCCAACTAGAGGGCGTAAGGCAGGGAGGATGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462772.2
3UTR-3UTR CCA 90 bp AAGCATCCTCCCTGCCTTACGCCCTCTAGTTGGACTTCTATTACTGGTTTAGCACTTACGCCCTCTAGTTaGACTTCTATTACTGGTTTA +
Preference number: 2 (lower is better)
Translates to: KHPPCLTPSSWTSITGLALTPSS*TSITGL
Trigger: TAAACCAGTAATAGAAGTCCAACTAGAGGGCGTAAG...TGCTAAACCAGTAATAGAAGTCCAACTAGAGGGCGTAAGGCAGGGAGGATGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
3UTR-3UTR CCA 90 bp CAAGCAGTAAGCAGGGAGGAGCTTAAGCAAGGACAGAGATATCCAAAGCATAGTCAGGCTAGAGATATGTaGTACAACATTCTCACGATG +
Preference number: 2 (lower is better)
Translates to: QAVSREELKQGQRYPKHSQARDM*YNILTM
Trigger: CATCGTGAGAATGTTGTACCACATATCTCTAGCCTG...ACTATGCTTTGGATATCTCTGTCCTTGCTTAAGCTCCTCCCTGCTTACTGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
3UTR-3UTR TCA 90 bp AAGCATCCTCCCTGCCTTACGCCCTCTAGTTGGACTTCTATTACTGGTTTAGCATATCAGCAGTCTTCGTaGAGTCTTCCAACTAATATT +
Preference number: 2 (lower is better)
Translates to: KHPPCLTPSSWTSITGLAYQQSS*SLPTNI
Trigger: AATATTAGTTGGAAGACTTCACGAAGACTGCTGATA...TGCTAAACCAGTAATAGAAGTCCAACTAGAGGGCGTAAGGCAGGGAGGATGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
3UTR CAA 90 bp AGTTTCACCAAAGATTGCTGTCCAACAGCTTCCTCCAGTAATGGGTaGACACCTTTCTTTTTCTCCACACCCTGTGTAATTTTGGTATCA +
Preference number: 2 (lower is better)
Translates to: SFTKDCCPTASSSNG*TPFFFSTPCVILVS
Trigger: TGATACCAAAATTACACAGGGTGTGGAGAAAAAGAAAGGTGTCAACCCATTACTGGAGGAAGCTGTTGGACAGCAATCTTTGGTGAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462772.2
ENST00000645739.1
3UTR-3UTR TCA 90 bp GATACAATAAGGAAGCTGGACCAGATGACATATGAAGTTTCTGCCAGTTCTAAAGGAAGCTGGACCAGATaGCATATGAAGTTTCTGCCA +
Preference number: 2 (lower is better)
Translates to: DTIRKLDQMTYEVSASSKGSWTR*HMKFLP
Trigger: TGGCAGAAACTTCATATGTCATCTGGTCCAGCTTCC...TTTAGAACTGGCAGAAACTTCATATGTCATCTGGTCCAGCTTCCTTATTGTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
3UTR-3UTR CCA 90 bp CAAGCAGTAAGCAGGGAGGAGCTTAAGCAAGGACAGAGATATCCAAAGCATAGTTATCACTATTTAGACTaGCCCACCCAAACACATTTT +
Preference number: 2 (lower is better)
Translates to: QAVSREELKQGQRYPKHSYHYLD*PTQTHF
Trigger: AAAATGTGTTTGGGTGGGCCAGTCTAAATAGTGATA...ACTATGCTTTGGATATCTCTGTCCTTGCTTAAGCTCCTCCCTGCTTACTGCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462772.2
3UTR-3UTR TCA 90 bp GCTTCCTCCAGTAATGGGTTGACACCTTTCTTTTTCTCCACACCCTGTGTAATTTATCAGCAGTCTTCGTaGAGTCTTCCAACTAATATT +
Preference number: 2 (lower is better)
Translates to: ASSSNGLTPFFFSTPCVIYQQSS*SLPTNI
Trigger: AATATTAGTTGGAAGACTTCACGAAGACTGCTGATA...AATTACACAGGGTGTGGAGAAAAAGAAAGGTGTCAACCCATTACTGGAGGAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462772.2
ENST00000645739.1
3UTR-3UTR TCA 90 bp GACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCAGGAAGCTGGACCAGATaGCATATGAAGTTTCTGCCA +
Preference number: 2 (lower is better)
Translates to: DFENSITFSHRYNKEAGPGSWTR*HMKFLP
Trigger: TGGCAGAAACTTCATATGTCATCTGGTCCAGCTTCC...TGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
3UTR-3UTR TCA 90 bp GATACAATAAGGAAGCTGGACCAGATGACATATGAAGTTTCTGCCAGTTCTAAAGTGTTAAGGTTGCTCTaGGCTTCATCTGTTACAGTC +
Preference number: 2 (lower is better)
Translates to: DTIRKLDQMTYEVSASSKVLRLL*ASSVTV
Trigger: GACTGTAACAGATGAAGCTCAGAGCAACCTTAACAC...TTTAGAACTGGCAGAAACTTCATATGTCATCTGGTCCAGCTTCCTTATTGTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462772.2
ENST00000645739.1
3UTR-3UTR TCA 90 bp GACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCAATGAGTCACCATGCCTaGGGAGCAATACGATTAACA +
Preference number: 2 (lower is better)
Translates to: DFENSITFSHRYNKEAGPMSHHA*GAIRLT
Trigger: TGTTAATCGTATTGCTCCTCAGGCATGGTGACTCAT...TGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462772.2
3UTR-3UTR TCA 90 bp GATACAATAAGGAAGCTGGACCAGATGACATATGAAGTTTCTGCCAGTTCTAAACCATACTTTAAAGTTTaGTTCTTTCCCAGGCTAGAG +
Preference number: 2 (lower is better)
Translates to: DTIRKLDQMTYEVSASSKPYFKV*FFPRLE
Trigger: CTCTAGCCTGGGAAAGAATCAAACTTTAAAGTATGG...TTTAGAACTGGCAGAAACTTCATATGTCATCTGGTCCAGCTTCCTTATTGTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
3UTR-3UTR TCA 90 bp GACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCAGTCATTCTGAGAACATaGCAAGCTTTCAAACAGACC +
Preference number: 2 (lower is better)
Translates to: DFENSITFSHRYNKEAGPVILRT*QAFKQT
Trigger: GGTCTGTTTGAAAGCTTGTCATGTTCTCAGAATGAC...TGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462772.2
3UTR-3UTR GCA 90 bp ACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCAGCATGTTTTGGGCCAGTaGCATCTATTGTTTATGGTC +
Preference number: 2 (lower is better)
Translates to: TLKTVLLFLTDTIRKLDQHVLGQ*HLLFMV
Trigger: GACCATAAACAATAGATGGCACTGGCCCAAAACATG...CTGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000462772.2
3UTR-3UTR CCA 90 bp GACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCATCTGTCTCTTCCACCTaGGTGACAGTAATTCTTCAA +
Preference number: 2 (lower is better)
Translates to: DFENSITFSHRYNKEAGPSVSST*VTVILQ
Trigger: TTGAAGAATTACTGTCACCCAGGTGGAAGAGACAGA...TGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462772.2
3UTR-3UTR TCA 90 bp GATACAATAAGGAAGCTGGACCAGATGACATATGAAGTTTCTGCCAGTTCTAAAGGTATTTTCAACTCATaGTGGGTTTATTGGGATGTA +
Preference number: 2 (lower is better)
Translates to: DTIRKLDQMTYEVSASSKGIFNS*WVYWDV
Trigger: TACATCCCAATAAACCCATCATGAGTTGAAAATACC...TTTAGAACTGGCAGAAACTTCATATGTCATCTGGTCCAGCTTCCTTATTGTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
3UTR-3UTR GCA 90 bp GACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCACTTGATAGTGATAAATaGCACACCATGACAGGTGTT +
Preference number: 2 (lower is better)
Translates to: DFENSITFSHRYNKEAGPLDSDK*HTMTGV
Trigger: AACACCTGTCATGGTGTGGCATTTATCACTATCAAG...TGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
3UTR-3UTR TCA 90 bp GACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCAGTCAATGGAGAATTCTaGTCCCAAAAGATATCATTC +
Preference number: 2 (lower is better)
Translates to: DFENSITFSHRYNKEAGPVNGEF*SQKISF
Trigger: GAATGATATCTTTTGGGATCAGAATTCTCCATTGAC...TGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000462772.2
3UTR-3UTR TCA 90 bp GACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCACTGCAAAAAGTGAACTaGCTGTCCAACCAAAATAAA +
Preference number: 2 (lower is better)
Translates to: DFENSITFSHRYNKEAGPLQKVN*LSNQNK
Trigger: TTTATTTTGGTTGGACAGTCAGTTCACTTTTTGCAG...TGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000462772.2
3UTR-3UTR GCA 90 bp GATACAATAAGGAAGCTGGACCAGATGACATATGAAGTTTCTGCCAGTTCTAAAATACAAGTTACCACTTaGGTACTGTTGTCATTTCTT +
Preference number: 2 (lower is better)
Translates to: DTIRKLDQMTYEVSASSKIQVTT*VLLSFL
Trigger: AAGAAATGACAACAGTACGCAAGTGGTAACTTGTAT...TTTAGAACTGGCAGAAACTTCATATGTCATCTGGTCCAGCTTCCTTATTGTATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462772.2
3UTR-3UTR CAA 90 bp CAAGCAGTAAGCAGGGAGGAGCTTAAGCAAGGACAGAGATATCCAAAGCATAGTGCATCCAGCACAATATaGGGCATACCAGTGTCAGTA +
Preference number: 3 (lower is better)
Translates to: QAVSREELKQGQRYPKHSASSTI*GIPVSV
Trigger: TACTGACACTGGTATGCCCAATATTGTGCTGGATGC...ACTATGCTTTGGATATCTCTGTCCTTGCTTAAGCTCCTCCCTGCTTACTGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462772.2
3UTR-3UTR CAA 90 bp AAGCATCCTCCCTGCCTTACGCCCTCTAGTTGGACTTCTATTACTGGTTTAGCAAGTTACTGGATTGCTTaGTGTCAAATGATTGACTTG +
Preference number: 3 (lower is better)
Translates to: KHPPCLTPSSWTSITGLASYWIA*CQMIDL
Trigger: CAAGTCAATCATTTGACACAAAGCAATCCAGTAACT...TGCTAAACCAGTAATAGAAGTCCAACTAGAGGGCGTAAGGCAGGGAGGATGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462772.2
3UTR CCA 72 bp TCCACCTGGGTGACAGTAATTCTTCAAACCATGTTTTaGGCCAGTGCCATCTATTGTTTATGGTCAACATAT +
Preference number: 3 (lower is better)
Translates to: STWVTVILQTMF*ASAIYCLWSTY
Trigger: ATATGTTGACCATAAACAATAGATGGCACTGGCCCAAAACATGGTTTGAAGAATTACTGTCACCCAGGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462772.2
3UTR-3UTR CAA 90 bp GACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCATCTTCAAACCATGTTTaGGGCCAGTGCCATCTATTG +
Preference number: 3 (lower is better)
Translates to: DFENSITFSHRYNKEAGPSSNHV*GQCHLL
Trigger: CAATAGATGGCACTGGCCCAAAACATGGTTTGAAGA...TGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462772.2
3UTR-3UTR CAA 90 bp GATACAATAAGGAAGCTGGACCAGATGACATATGAAGTTTCTGCCAGTTCTAAACCGAACCAGTGCTTCTaGTCTTTTTCTCTGAATTTC +
Preference number: 3 (lower is better)
Translates to: DTIRKLDQMTYEVSASSKPNQCF*SFSLNF
Trigger: GAAATTCAGAGAAAAAGACAAGAAGCACTGGTTCGG...TTTAGAACTGGCAGAAACTTCATATGTCATCTGGTCCAGCTTCCTTATTGTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
3UTR-3UTR CAA 90 bp GATACAATAAGGAAGCTGGACCAGATGACATATGAAGTTTCTGCCAGTTCTAAAGAACAGTTTCACGTATaGAGCCTTTGCTTCTTAGTA +
Preference number: 3 (lower is better)
Translates to: DTIRKLDQMTYEVSASSKEQFHV*SLCFLV
Trigger: TACTAAGAAGCAAAGGCTCAATACGTGAAACTGTTC...TTTAGAACTGGCAGAAACTTCATATGTCATCTGGTCCAGCTTCCTTATTGTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462772.2
3UTR-3UTR CAA 90 bp GACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCAAGCAACAGAGTTGTTTaGACTGTGCTAGGTGTAATT +
Preference number: 3 (lower is better)
Translates to: DFENSITFSHRYNKEAGPSNRVV*TVLGVI
Trigger: AATTACACCTAGCACAGTCAAAACAACTCTGTTGCT...TGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462772.2
3UTR-3UTR CAA 90 bp GACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCAACCACTTGCGTACTGTaGTCATTTCTTTATATGAGC +
Preference number: 3 (lower is better)
Translates to: DFENSITFSHRYNKEAGPTTCVL*SFLYMS
Trigger: GCTCATATAAAGAAATGACAACAGTACGCAAGTGGT...TGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462772.2
3UTR CCA 72 bp GTTGCTCTGAGCTTCATCTGTTACAGTCTTATGGCATaGCTGATTAGTACTCAATTTCTTCTTATAAGTAGT +
Preference number: 3 (lower is better)
Translates to: VALSFICYSLMA*LISTQFLLISS
Trigger: ACTACTTATAAGAAGAAATTGAGTACTAATCAGCCATGCCATAAGACTGTAACAGATGAAGCTCAGAGCAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462772.2
ENST00000645739.1
3UTR-3UTR CAA 90 bp ACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCAGCTTTACCTAACTGCTTaGTCAATGGAGAATTCTGAT +
Preference number: 3 (lower is better)
Translates to: TLKTVLLFLTDTIRKLDQLYLTA*SMENSD
Trigger: ATCAGAATTCTCCATTGACAAAGCAGTTAGGTAAAG...CTGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462772.2
3UTR CCA 72 bp CATATAGTAACTATTCAAGCGCAGGTTAAGGAAAAATaGCATACTTCCTTCAGAGAAGACACTAAGCAAAAA +
Preference number: 3 (lower is better)
Translates to: HIVTIQAQVKEK*HTSFREDTKQK
Trigger: TTTTTGCTTAGTGTCTTCTCTGAAGGAAGTATGCCATTTTTCCTTAACCTGCGCTTGAATAGTTACTATATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462772.2
CDS-3UTR GCA 90 bp AAGCATCCTCCCTGCCTTACGCCCTCTAGTTGGACTTCTATTACTGGTTTAGCAGGAGGCTGCTCTCGCTaGCGCACTGGCCCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: KHPPCLTPSSWTSITGLAGGCSR*RTGPGG
Trigger: GCCTCCCGGGCCAGTGCGGCAGCGAGAGCAGCCTCC...TGCTAAACCAGTAATAGAAGTCCAACTAGAGGGCGTAAGGCAGGGAGGATGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR GCA 90 bp AAGCATCCTCCCTGCCTTACGCCCTCTAGTTGGACTTCTATTACTGGTTTAGCAGCGGCGGTCGGAGGCTaGTCTCGCTGCCGCACTGGC +
Preference number: 4 (lower is better)
Translates to: KHPPCLTPSSWTSITGLAAAVGG*SRCRTG
Trigger: GCCAGTGCGGCAGCGAGAGCAGCCTCCGACCGCCGC...TGCTAAACCAGTAATAGAAGTCCAACTAGAGGGCGTAAGGCAGGGAGGATGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR GCA 90 bp CAAGCAGTAAGCAGGGAGGAGCTTAAGCAAGGACAGAGATATCCAAAGCATAGTGGAGGCTGCTCTCGCTaGCGCACTGGCCCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: QAVSREELKQGQRYPKHSGGCSR*RTGPGG
Trigger: GCCTCCCGGGCCAGTGCGGCAGCGAGAGCAGCCTCC...ACTATGCTTTGGATATCTCTGTCCTTGCTTAAGCTCCTCCCTGCTTACTGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR GCA 90 bp GCTTCCTCCAGTAATGGGTTGACACCTTTCTTTTTCTCCACACCCTGTGTAATTGGAGGCTGCTCTCGCTaGCGCACTGGCCCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: ASSSNGLTPFFFSTPCVIGGCSR*RTGPGG
Trigger: GCCTCCCGGGCCAGTGCGGCAGCGAGAGCAGCCTCC...AATTACACAGGGTGTGGAGAAAAAGAAAGGTGTCAACCCATTACTGGAGGAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462772.2
ENST00000645739.1
CDS-3UTR GCA 90 bp GCTTCCTCCAGTAATGGGTTGACACCTTTCTTTTTCTCCACACCCTGTGTAATTGCGGCGGTCGGAGGCTaGTCTCGCTGCCGCACTGGC +
Preference number: 4 (lower is better)
Translates to: ASSSNGLTPFFFSTPCVIAAVGG*SRCRTG
Trigger: GCCAGTGCGGCAGCGAGAGCAGCCTCCGACCGCCGC...AATTACACAGGGTGTGGAGAAAAAGAAAGGTGTCAACCCATTACTGGAGGAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462772.2
ENST00000645739.1
CDS-3UTR CCA 90 bp CAAGCAGTAAGCAGGGAGGAGCTTAAGCAAGGACAGAGATATCCAAAGCATAGTCAGCCGCCTCCTCCCTaGCTCGACCACCGAGCCGCA +
Preference number: 4 (lower is better)
Translates to: QAVSREELKQGQRYPKHSQPPPP*LDHRAA
Trigger: TGCGGCTCGGTGGTCGAGCCAGGGAGGAGGCGGCTG...ACTATGCTTTGGATATCTCTGTCCTTGCTTAAGCTCCTCCCTGCTTACTGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR CCA 90 bp CAAGCAGTAAGCAGGGAGGAGCTTAAGCAAGGACAGAGATATCCAAAGCATAGTCCGACTCATTGCCTATaGCCCGCCTCCACCAGCCGC +
Preference number: 4 (lower is better)
Translates to: QAVSREELKQGQRYPKHSPTHCL*PASTSR
Trigger: GCGGCTGGTGGAGGCGGGCCATAGGCAATGAGTCGG...ACTATGCTTTGGATATCTCTGTCCTTGCTTAAGCTCCTCCCTGCTTACTGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR GCA 90 bp CAAGCAGTAAGCAGGGAGGAGCTTAAGCAAGGACAGAGATATCCAAAGCATAGTCCTTCGCCGACTCATTaGCTATGGCCCGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: QAVSREELKQGQRYPKHSPSPTH*LWPAST
Trigger: GGTGGAGGCGGGCCATAGGCAATGAGTCGGCGAAGG...ACTATGCTTTGGATATCTCTGTCCTTGCTTAAGCTCCTCCCTGCTTACTGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR GCA 90 bp GATACAATAAGGAAGCTGGACCAGATGACATATGAAGTTTCTGCCAGTTCTAAAGCGGCGGTCGGAGGCTaGTCTCGCTGCCGCACTGGC +
Preference number: 4 (lower is better)
Translates to: DTIRKLDQMTYEVSASSKAAVGG*SRCRTG
Trigger: GCCAGTGCGGCAGCGAGAGCAGCCTCCGACCGCCGC...TTTAGAACTGGCAGAAACTTCATATGTCATCTGGTCCAGCTTCCTTATTGTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR GCA 90 bp AAGCATCCTCCCTGCCTTACGCCCTCTAGTTGGACTTCTATTACTGGTTTAGCACGGGGTTACTTTTACTaGACAGGGCGGCGGTCGGAG +
Preference number: 4 (lower is better)
Translates to: KHPPCLTPSSWTSITGLARGYFY*TGRRSE
Trigger: CTCCGACCGCCGCCCTGTGCAGTAAAAGTAACCCCG...TGCTAAACCAGTAATAGAAGTCCAACTAGAGGGCGTAAGGCAGGGAGGATGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR GCA 90 bp GACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCAGGAGGCTGCTCTCGCTaGCGCACTGGCCCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: DFENSITFSHRYNKEAGPGGCSR*RTGPGG
Trigger: GCCTCCCGGGCCAGTGCGGCAGCGAGAGCAGCCTCC...TGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR GCA 90 bp GCTTCCTCCAGTAATGGGTTGACACCTTTCTTTTTCTCCACACCCTGTGTAATTCGGGGTTACTTTTACTaGACAGGGCGGCGGTCGGAG +
Preference number: 4 (lower is better)
Translates to: ASSSNGLTPFFFSTPCVIRGYFY*TGRRSE
Trigger: CTCCGACCGCCGCCCTGTGCAGTAAAAGTAACCCCG...AATTACACAGGGTGTGGAGAAAAAGAAAGGTGTCAACCCATTACTGGAGGAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000462772.2
ENST00000645739.1
CDS-3UTR CCA 90 bp GATACAATAAGGAAGCTGGACCAGATGACATATGAAGTTTCTGCCAGTTCTAAACCGACTCATTGCCTATaGCCCGCCTCCACCAGCCGC +
Preference number: 4 (lower is better)
Translates to: DTIRKLDQMTYEVSASSKPTHCL*PASTSR
Trigger: GCGGCTGGTGGAGGCGGGCCATAGGCAATGAGTCGG...TTTAGAACTGGCAGAAACTTCATATGTCATCTGGTCCAGCTTCCTTATTGTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR GCA 90 bp GATACAATAAGGAAGCTGGACCAGATGACATATGAAGTTTCTGCCAGTTCTAAACCTTCGCCGACTCATTaGCTATGGCCCGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: DTIRKLDQMTYEVSASSKPSPTH*LWPAST
Trigger: GGTGGAGGCGGGCCATAGGCAATGAGTCGGCGAAGG...TTTAGAACTGGCAGAAACTTCATATGTCATCTGGTCCAGCTTCCTTATTGTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR CCA 90 bp GACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCACCGACTCATTGCCTATaGCCCGCCTCCACCAGCCGC +
Preference number: 4 (lower is better)
Translates to: DFENSITFSHRYNKEAGPPTHCL*PASTSR
Trigger: GCGGCTGGTGGAGGCGGGCCATAGGCAATGAGTCGG...TGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR CCA 90 bp ACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCAGCCGACTCATTGCCTATaGCCCGCCTCCACCAGCCGC +
Preference number: 4 (lower is better)
Translates to: TLKTVLLFLTDTIRKLDQPTHCL*PASTSR
Trigger: GCGGCTGGTGGAGGCGGGCCATAGGCAATGAGTCGG...CTGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR TCA 90 bp TTTGCTACACTGGGAGTACAAGGAATAGCAGTTTCACCAATCCACATGTCCAGCCTGAGATTACAGGAATaGGTCACCATGCCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: FATLGVQGIAVSPIHMSSLRLQE*VTMPEE
Trigger: CTCCTCAGGCATGGTGACTCATTCCTGTAATCTCAG...GCTGGACATGTGGATTGGTGAAACTGCTATTCCTTGTACTCCCAGTGTAGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462772.2
CDS-3UTR GCA 90 bp CAAGCAGTAAGCAGGGAGGAGCTTAAGCAAGGACAGAGATATCCAAAGCATAGTATAAAGCATCCTCCCTaGCTTACGCCCTCTAGTTGG +
Preference number: 4 (lower is better)
Translates to: QAVSREELKQGQRYPKHSIKHPP*LTPSSW
Trigger: CCAACTAGAGGGCGTAAGGCAGGGAGGATGCTTTAT...ACTATGCTTTGGATATCTCTGTCCTTGCTTAAGCTCCTCCCTGCTTACTGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR CCA 90 bp TTTGCTACACTGGGAGTACAAGGAATAGCAGTTTCACCAATCCACATGTCCAGCTTTCAGCGCTCTCTTTaGTGTTTCATACCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: FATLGVQGIAVSPIHMSSFQRSL*CFIPSG
Trigger: CCCCGAGGGTATGAAACACCAAAGAGAGCGCTGAAA...GCTGGACATGTGGATTGGTGAAACTGCTATTCCTTGTACTCCCAGTGTAGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462772.2
CDS-3UTR TCA 90 bp AAGCATCCTCCCTGCCTTACGCCCTCTAGTTGGACTTCTATTACTGGTTTAGCACCTTGTGTTCAAAGCTaGCTTCCTTTCAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: KHPPCLTPSSWTSITGLAPCVQS*LPFRSF
Trigger: GAAGCTTCTGAAAGGAAGTCAGCTTTGAACACAAGG...TGCTAAACCAGTAATAGAAGTCCAACTAGAGGGCGTAAGGCAGGGAGGATGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272342.6
CDS-3UTR TCA 90 bp AAGCATCCTCCCTGCCTTACGCCCTCTAGTTGGACTTCTATTACTGGTTTAGCAAGCAATCAATTCCAGTaGAGATGGTTAGGTACGAGG +
Preference number: 4 (lower is better)
Translates to: KHPPCLTPSSWTSITGLASNQFQ*RWLGTR
Trigger: CCTCGTACCTAACCATCTTCACTGGAATTGATTGCT...TGCTAAACCAGTAATAGAAGTCCAACTAGAGGGCGTAAGGCAGGGAGGATGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR GCA 90 bp ACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCAGCGGGGTTACTTTTACTaGACAGGGCGGCGGTCGGAG +
Preference number: 4 (lower is better)
Translates to: TLKTVLLFLTDTIRKLDQRGYFY*TGRRSE
Trigger: CTCCGACCGCCGCCCTGTGCAGTAAAAGTAACCCCG...CTGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR TCA 90 bp CAAGCAGTAAGCAGGGAGGAGCTTAAGCAAGGACAGAGATATCCAAAGCATAGTATGGGTGTATCTACTTaGGAAGAAAGTGATCGTGGG +
Preference number: 4 (lower is better)
Translates to: QAVSREELKQGQRYPKHSMGVST*EESDRG
Trigger: CCCACGATCACTTTCTTCTCAAGTAGATACACCCAT...ACTATGCTTTGGATATCTCTGTCCTTGCTTAAGCTCCTCCCTGCTTACTGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272342.6
CDS-3UTR TCA 90 bp CAAGCAGTAAGCAGGGAGGAGCTTAAGCAAGGACAGAGATATCCAAAGCATAGTCCTCCAGTAATGGGTTaGCACCTTTCTTTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: QAVSREELKQGQRYPKHSPPVMG*HLSFSP
Trigger: TGGAGAAAAAGAAAGGTGTCAACCCATTACTGGAGG...ACTATGCTTTGGATATCTCTGTCCTTGCTTAAGCTCCTCCCTGCTTACTGCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR TCA 90 bp CAAGCAGTAAGCAGGGAGGAGCTTAAGCAAGGACAGAGATATCCAAAGCATAGTAGCAATCAATTCCAGTaGAGATGGTTAGGTACGAGG +
Preference number: 4 (lower is better)
Translates to: QAVSREELKQGQRYPKHSSNQFQ*RWLGTR
Trigger: CCTCGTACCTAACCATCTTCACTGGAATTGATTGCT...ACTATGCTTTGGATATCTCTGTCCTTGCTTAAGCTCCTCCCTGCTTACTGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR TCA 90 bp TTTGCTACACTGGGAGTACAAGGAATAGCAGTTTCACCAATCCACATGTCCAGCATGAGTCACCATGCCTaGGGAGCAATACGATTAACA +
Preference number: 4 (lower is better)
Translates to: FATLGVQGIAVSPIHMSSMSHHA*GAIRLT
Trigger: TGTTAATCGTATTGCTCCTCAGGCATGGTGACTCAT...GCTGGACATGTGGATTGGTGAAACTGCTATTCCTTGTACTCCCAGTGTAGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462772.2
CDS-3UTR TCA 90 bp AAGCATCCTCCCTGCCTTACGCCCTCTAGTTGGACTTCTATTACTGGTTTAGCATATCCCTGCAAAAAGTaGACTGACTGTCCAACCAAA +
Preference number: 4 (lower is better)
Translates to: KHPPCLTPSSWTSITGLAYPCKK*TDCPTK
Trigger: TTTGGTTGGACAGTCAGTTCACTTTTTGCAGGGATA...TGCTAAACCAGTAATAGAAGTCCAACTAGAGGGCGTAAGGCAGGGAGGATGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462772.2
CDS-3UTR GCA 90 bp GATACAATAAGGAAGCTGGACCAGATGACATATGAAGTTTCTGCCAGTTCTAAAGCCGCCACTGTTTTGTaGGGCGTTTTCTTCGGGCTA +
Preference number: 4 (lower is better)
Translates to: DTIRKLDQMTYEVSASSKAATVL*GVFFGL
Trigger: TAGCCCGAAGAAAACGCCGCACAAAACAGTGGCGGC...TTTAGAACTGGCAGAAACTTCATATGTCATCTGGTCCAGCTTCCTTATTGTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR GCA 90 bp AAGCATCCTCCCTGCCTTACGCCCTCTAGTTGGACTTCTATTACTGGTTTAGCAATGTCTGCACTGAAATaGTGCCTGGATTCAAATGCT +
Preference number: 4 (lower is better)
Translates to: KHPPCLTPSSWTSITGLAMSALK*CLDSNA
Trigger: AGCATTTGAATCCAGGCAGCATTTCAGTGCAGACAT...TGCTAAACCAGTAATAGAAGTCCAACTAGAGGGCGTAAGGCAGGGAGGATGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272342.6
CDS-3UTR GCA 90 bp TTTGCTACACTGGGAGTACAAGGAATAGCAGTTTCACCAATCCACATGTCCAGCAGTTTCACCAAAGATTaGTGTCCAACAGCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: FATLGVQGIAVSPIHMSSSFTKD*CPTASS
Trigger: GGAGGAAGCTGTTGGACAGCAATCTTTGGTGAAACT...GCTGGACATGTGGATTGGTGAAACTGCTATTCCTTGTACTCCCAGTGTAGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462772.2
ENST00000645739.1
CDS-3UTR GCA 90 bp AAGCATCCTCCCTGCCTTACGCCCTCTAGTTGGACTTCTATTACTGGTTTAGCACATTCTCCGAACCAGTaGTTCTTGTCTTTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: KHPPCLTPSSWTSITGLAHSPNQ*FLSFSL
Trigger: CAGAGAAAAAGACAAGAAGCACTGGTTCGGAGAATG...TGCTAAACCAGTAATAGAAGTCCAACTAGAGGGCGTAAGGCAGGGAGGATGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR CCA 90 bp AAGCATCCTCCCTGCCTTACGCCCTCTAGTTGGACTTCTATTACTGGTTTAGCATTTCAGCGCTCTCTTTaGTGTTTCATACCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: KHPPCLTPSSWTSITGLAFQRSL*CFIPFL
Trigger: GAGGAAAGGTATGAAACACCAAAGAGAGCGCTGAAA...TGCTAAACCAGTAATAGAAGTCCAACTAGAGGGCGTAAGGCAGGGAGGATGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272342.6
ENST00000644028.1
ENST00000645739.1
CDS-3UTR TCA 90 bp CAAGCAGTAAGCAGGGAGGAGCTTAAGCAAGGACAGAGATATCCAAAGCATAGTCTAATGTCTTGTTGCTaGGTTAGTTTGGCTCCATGT +
Preference number: 4 (lower is better)
Translates to: QAVSREELKQGQRYPKHSLMSCC*VSLAPC
Trigger: ACATGGAGCCAAACTAACTCAGCAACAAGACATTAG...ACTATGCTTTGGATATCTCTGTCCTTGCTTAAGCTCCTCCCTGCTTACTGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272342.6
CDS-3UTR TCA 90 bp AAGCATCCTCCCTGCCTTACGCCCTCTAGTTGGACTTCTATTACTGGTTTAGCACCATACTTTAAAGTTTaGTTCTTTCCCAGGCTAGAG +
Preference number: 4 (lower is better)
Translates to: KHPPCLTPSSWTSITGLAPYFKV*FFPRLE
Trigger: CTCTAGCCTGGGAAAGAATCAAACTTTAAAGTATGG...TGCTAAACCAGTAATAGAAGTCCAACTAGAGGGCGTAAGGCAGGGAGGATGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR GCA 90 bp CAAGCAGTAAGCAGGGAGGAGCTTAAGCAAGGACAGAGATATCCAAAGCATAGTTTTGTCAAAGATGTCTaGACTGAAATGCTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: QAVSREELKQGQRYPKHSFVKDV*TEMLPG
Trigger: TCCAGGCAGCATTTCAGTGCAGACATCTTTGACAAA...ACTATGCTTTGGATATCTCTGTCCTTGCTTAAGCTCCTCCCTGCTTACTGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272342.6
CDS-3UTR GCA 90 bp CAAGCAGTAAGCAGGGAGGAGCTTAAGCAAGGACAGAGATATCCAAAGCATAGTCATTCTCCGAACCAGTaGTTCTTGTCTTTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: QAVSREELKQGQRYPKHSHSPNQ*FLSFSL
Trigger: CAGAGAAAAAGACAAGAAGCACTGGTTCGGAGAATG...ACTATGCTTTGGATATCTCTGTCCTTGCTTAAGCTCCTCCCTGCTTACTGCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR CCA 90 bp TTTGCTACACTGGGAGTACAAGGAATAGCAGTTTCACCAATCCACATGTCCAGCCAGGCTAGAGATATGTaGTACAACATTCTCACGATG +
Preference number: 4 (lower is better)
Translates to: FATLGVQGIAVSPIHMSSQARDM*YNILTM
Trigger: CATCGTGAGAATGTTGTACCACATATCTCTAGCCTG...GCTGGACATGTGGATTGGTGAAACTGCTATTCCTTGTACTCCCAGTGTAGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462772.2
ENST00000645739.1
CDS-3UTR TCA 90 bp CAAGCAGTAAGCAGGGAGGAGCTTAAGCAAGGACAGAGATATCCAAAGCATAGTTTTGATGCACTAGTCTaGTTTGGGTTACTAACACTG +
Preference number: 4 (lower is better)
Translates to: QAVSREELKQGQRYPKHSFDALV*FGLLTL
Trigger: CAGTGTTAGTAACCCAAATCAGACTAGTGCATCAAA...ACTATGCTTTGGATATCTCTGTCCTTGCTTAAGCTCCTCCCTGCTTACTGCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272342.6
CDS-3UTR TCA 90 bp AAGCATCCTCCCTGCCTTACGCCCTCTAGTTGGACTTCTATTACTGGTTTAGCAAATTTCATTGGCAAATaGGGGATCATTCCAATCATC +
Preference number: 4 (lower is better)
Translates to: KHPPCLTPSSWTSITGLANFIGK*GIIPII
Trigger: GATGATTGGAATGATCCCTCATTTGCCAATGAAATT...TGCTAAACCAGTAATAGAAGTCCAACTAGAGGGCGTAAGGCAGGGAGGATGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272342.6
CDS-3UTR TCA 90 bp TTTGCTACACTGGGAGTACAAGGAATAGCAGTTTCACCAATCCACATGTCCAGCGTCTTATGGCATGGCTaGTTAGTACTCAATTTCTTC +
Preference number: 4 (lower is better)
Translates to: FATLGVQGIAVSPIHMSSVLWHG*LVLNFF
Trigger: GAAGAAATTGAGTACTAATCAGCCATGCCATAAGAC...GCTGGACATGTGGATTGGTGAAACTGCTATTCCTTGTACTCCCAGTGTAGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462772.2
ENST00000645739.1
CDS-3UTR TCA 90 bp CAAGCAGTAAGCAGGGAGGAGCTTAAGCAAGGACAGAGATATCCAAAGCATAGTCCATACTTTAAAGTTTaGTTCTTTCCCAGGCTAGAG +
Preference number: 4 (lower is better)
Translates to: QAVSREELKQGQRYPKHSPYFKV*FFPRLE
Trigger: CTCTAGCCTGGGAAAGAATCAAACTTTAAAGTATGG...ACTATGCTTTGGATATCTCTGTCCTTGCTTAAGCTCCTCCCTGCTTACTGCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR TCA 90 bp GCTTCCTCCAGTAATGGGTTGACACCTTTCTTTTTCTCCACACCCTGTGTAATTGTCATTCTGAGAACATaGCAAGCTTTCAAACAGACC +
Preference number: 4 (lower is better)
Translates to: ASSSNGLTPFFFSTPCVIVILRT*QAFKQT
Trigger: GGTCTGTTTGAAAGCTTGTCATGTTCTCAGAATGAC...AATTACACAGGGTGTGGAGAAAAAGAAAGGTGTCAACCCATTACTGGAGGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462772.2
CDS-3UTR GCA 90 bp CAAGCAGTAAGCAGGGAGGAGCTTAAGCAAGGACAGAGATATCCAAAGCATAGTTCTTCTTTCACATTTTaGAAAGGGATGAGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: QAVSREELKQGQRYPKHSSSFTF*KGMSRA
Trigger: TGCCCTACTCATCCCTTTGCAAAATGTGAAAGAAGA...ACTATGCTTTGGATATCTCTGTCCTTGCTTAAGCTCCTCCCTGCTTACTGCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR GCA 90 bp ATGACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACGCCGCCACTGTTTTGTaGGGCGTTTTCTTCGGGCTA +
Preference number: 4 (lower is better)
Translates to: MTLKTVLLFLTDTIRKLDAATVL*GVFFGL
Trigger: TAGCCCGAAGAAAACGCCGCACAAAACAGTGGCGGC...GTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR GCA 90 bp CAAGCAGTAAGCAGGGAGGAGCTTAAGCAAGGACAGAGATATCCAAAGCATAGTCTTGATAGTGATAAATaGCACACCATGACAGGTGTT +
Preference number: 4 (lower is better)
Translates to: QAVSREELKQGQRYPKHSLDSDK*HTMTGV
Trigger: AACACCTGTCATGGTGTGGCATTTATCACTATCAAG...ACTATGCTTTGGATATCTCTGTCCTTGCTTAAGCTCCTCCCTGCTTACTGCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR GCA 90 bp TTTGCTACACTGGGAGTACAAGGAATAGCAGTTTCACCAATCCACATGTCCAGCCTTGATAGTGATAAATaGCACACCATGACAGGTGTT +
Preference number: 4 (lower is better)
Translates to: FATLGVQGIAVSPIHMSSLDSDK*HTMTGV
Trigger: AACACCTGTCATGGTGTGGCATTTATCACTATCAAG...GCTGGACATGTGGATTGGTGAAACTGCTATTCCTTGTACTCCCAGTGTAGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462772.2
ENST00000645739.1
CDS-3UTR CCA 90 bp AAGCATCCTCCCTGCCTTACGCCCTCTAGTTGGACTTCTATTACTGGTTTAGCAATCATTCTGTCCATCTaGATCATTAGGAGAACTGAA +
Preference number: 4 (lower is better)
Translates to: KHPPCLTPSSWTSITGLAIILSI*IIRRTE
Trigger: TTCAGTTCTCCTAATGATCCAGATGGACAGAATGAT...TGCTAAACCAGTAATAGAAGTCCAACTAGAGGGCGTAAGGCAGGGAGGATGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR CCA 90 bp GCTTCCTCCAGTAATGGGTTGACACCTTTCTTTTTCTCCACACCCTGTGTAATTCAGGCTAGAGATATGTaGTACAACATTCTCACGATG +
Preference number: 4 (lower is better)
Translates to: ASSSNGLTPFFFSTPCVIQARDM*YNILTM
Trigger: CATCGTGAGAATGTTGTACCACATATCTCTAGCCTG...AATTACACAGGGTGTGGAGAAAAAGAAAGGTGTCAACCCATTACTGGAGGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462772.2
ENST00000645739.1
CDS-3UTR CCA 90 bp AAGCATCCTCCCTGCCTTACGCCCTCTAGTTGGACTTCTATTACTGGTTTAGCACAGGTTAAGGAAAAATaGCATACTTCCTTCAGAGAA +
Preference number: 4 (lower is better)
Translates to: KHPPCLTPSSWTSITGLAQVKEK*HTSFRE
Trigger: TTCTCTGAAGGAAGTATGCCATTTTTCCTTAACCTG...TGCTAAACCAGTAATAGAAGTCCAACTAGAGGGCGTAAGGCAGGGAGGATGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462772.2
CDS-3UTR CCA 90 bp GCTTCCTCCAGTAATGGGTTGACACCTTTCTTTTTCTCCACACCCTGTGTAATTCTTCAAACCATGTTTTaGGCCAGTGCCATCTATTGT +
Preference number: 4 (lower is better)
Translates to: ASSSNGLTPFFFSTPCVILQTMF*ASAIYC
Trigger: ACAATAGATGGCACTGGCCCAAAACATGGTTTGAAG...AATTACACAGGGTGTGGAGAAAAAGAAAGGTGTCAACCCATTACTGGAGGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462772.2
CDS-3UTR TCA 90 bp TTTGCTACACTGGGAGTACAAGGAATAGCAGTTTCACCAATCCACATGTCCAGCTATCAGCAGTCTTCGTaGAGTCTTCCAACTAATATT +
Preference number: 4 (lower is better)
Translates to: FATLGVQGIAVSPIHMSSYQQSS*SLPTNI
Trigger: AATATTAGTTGGAAGACTTCACGAAGACTGCTGATA...GCTGGACATGTGGATTGGTGAAACTGCTATTCCTTGTACTCCCAGTGTAGCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462772.2
ENST00000645739.1
CDS-3UTR TCA 90 bp CAAGCAGTAAGCAGGGAGGAGCTTAAGCAAGGACAGAGATATCCAAAGCATAGTACTAGAAGATTTAGGTaGAAAGATCCCTACAGTTTG +
Preference number: 4 (lower is better)
Translates to: QAVSREELKQGQRYPKHSTRRFR*KDPYSL
Trigger: CAAACTGTAGGGATCTTTTCACCTAAATCTTCTAGT...ACTATGCTTTGGATATCTCTGTCCTTGCTTAAGCTCCTCCCTGCTTACTGCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462772.2
CDS-3UTR GCA 90 bp AAGCATCCTCCCTGCCTTACGCCCTCTAGTTGGACTTCTATTACTGGTTTAGCACTGCCTGGATTCAAATaGTTTGATTGTACCAAATTA +
Preference number: 4 (lower is better)
Translates to: KHPPCLTPSSWTSITGLALPGFK*FDCTKL
Trigger: TAATTTGGTACAATCAAAGCATTTGAATCCAGGCAG...TGCTAAACCAGTAATAGAAGTCCAACTAGAGGGCGTAAGGCAGGGAGGATGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272342.6
CDS-3UTR GCA 90 bp ACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCAGATAAAGCATCCTCCCTaGCTTACGCCCTCTAGTTGG +
Preference number: 4 (lower is better)
Translates to: TLKTVLLFLTDTIRKLDQIKHPP*LTPSSW
Trigger: CCAACTAGAGGGCGTAAGGCAGGGAGGATGCTTTAT...CTGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR GCA 90 bp GACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCAATAAAGCATCCTCCCTaGCTTACGCCCTCTAGTTGG +
Preference number: 4 (lower is better)
Translates to: DFENSITFSHRYNKEAGPIKHPP*LTPSSW
Trigger: CCAACTAGAGGGCGTAAGGCAGGGAGGATGCTTTAT...TGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR GCA 90 bp GCTTCCTCCAGTAATGGGTTGACACCTTTCTTTTTCTCCACACCCTGTGTAATTCTTGATAGTGATAAATaGCACACCATGACAGGTGTT +
Preference number: 4 (lower is better)
Translates to: ASSSNGLTPFFFSTPCVILDSDK*HTMTGV
Trigger: AACACCTGTCATGGTGTGGCATTTATCACTATCAAG...AATTACACAGGGTGTGGAGAAAAAGAAAGGTGTCAACCCATTACTGGAGGAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462772.2
ENST00000645739.1
CDS-3UTR GCA 90 bp AAGCATCCTCCCTGCCTTACGCCCTCTAGTTGGACTTCTATTACTGGTTTAGCAGCTTTAGGCATTAATTaGAAACCAAACCAACAAATC +
Preference number: 4 (lower is better)
Translates to: KHPPCLTPSSWTSITGLAALGIN*KPNQQI
Trigger: GATTTGTTGGTTTGGTTTGCAATTAATGCCTAAAGC...TGCTAAACCAGTAATAGAAGTCCAACTAGAGGGCGTAAGGCAGGGAGGATGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462772.2
CDS-3UTR GCA 90 bp AAGCATCCTCCCTGCCTTACGCCCTCTAGTTGGACTTCTATTACTGGTTTAGCAGTTTTTCATCCTAACTaGTTTGTCAATGGAGAATTC +
Preference number: 4 (lower is better)
Translates to: KHPPCLTPSSWTSITGLAVFHPN*FVNGEF
Trigger: GAATTCTCCATTGACAAAGCAGTTAGGATGAAAAAC...TGCTAAACCAGTAATAGAAGTCCAACTAGAGGGCGTAAGGCAGGGAGGATGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645739.1
CDS-3UTR CCA 90 bp CAAGCAGTAAGCAGGGAGGAGCTTAAGCAAGGACAGAGATATCCAAAGCATAGTATCATTCTGTCCATCTaGATCATTAGGAGAACTGAA +
Preference number: 4 (lower is better)
Translates to: QAVSREELKQGQRYPKHSIILSI*IIRRTE
Trigger: TTCAGTTCTCCTAATGATCCAGATGGACAGAATGAT...ACTATGCTTTGGATATCTCTGTCCTTGCTTAAGCTCCTCCCTGCTTACTGCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR CCA 90 bp CAAGCAGTAAGCAGGGAGGAGCTTAAGCAAGGACAGAGATATCCAAAGCATAGTAGCAATTTGGTCAAATaGCTTCTGACTGCTATTTTG +
Preference number: 4 (lower is better)
Translates to: QAVSREELKQGQRYPKHSSNLVK*LLTAIL
Trigger: CAAAATAGCAGTCAGAAGCCATTTGACCAAATTGCT...ACTATGCTTTGGATATCTCTGTCCTTGCTTAAGCTCCTCCCTGCTTACTGCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272342.6
CDS-3UTR CCA 90 bp GACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCAGCCTCTGGCAGTTCTTaGCTTAACTGTCCGCTACAT +
Preference number: 4 (lower is better)
Translates to: DFENSITFSHRYNKEAGPASGSS*LNCPLH
Trigger: ATGTAGCGGACAGTTAAGCCAAGAACTGCCAGAGGC...TGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272342.6
3UTR CAA 72 bp TTCCACCTGGGTGACAGTAATTCTTCAAACCATGTTTaGGGCCAGTGCCATCTATTGTTTATGGTCAACATA +
Preference number: 4 (lower is better)
Translates to: FHLGDSNSSNHV*GQCHLLFMVNI
Trigger: TATGTTGACCATAAACAATAGATGGCACTGGCCCAAAACATGGTTTGAAGAATTACTGTCACCCAGGTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462772.2
CDS-3UTR TCA 90 bp GATACAATAAGGAAGCTGGACCAGATGACATATGAAGTTTCTGCCAGTTCTAAACAAAGATGTCTGCACTaGAATGCTGCCTGGATTCAA +
Preference number: 4 (lower is better)
Translates to: DTIRKLDQMTYEVSASSKQRCLH*NAAWIQ
Trigger: TTGAATCCAGGCAGCATTTCAGTGCAGACATCTTTG...TTTAGAACTGGCAGAAACTTCATATGTCATCTGGTCCAGCTTCCTTATTGTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272342.6
CDS-3UTR TCA 90 bp ACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCAGAGCTGCATTTACAGATaGGGCTCGTGCTTTAGCCAT +
Preference number: 4 (lower is better)
Translates to: TLKTVLLFLTDTIRKLDQSCIYR*GSCFSH
Trigger: ATGGCTAAAGCACGAGCCTCATCTGTAAATGCAGCT...CTGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR TCA 90 bp GACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCAAGCTGCATTTACAGATaGGGCTCGTGCTTTAGCCAT +
Preference number: 4 (lower is better)
Translates to: DFENSITFSHRYNKEAGPSCIYR*GSCFSH
Trigger: ATGGCTAAAGCACGAGCCTCATCTGTAAATGCAGCT...TGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR TCA 90 bp ACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCAGGGAAGCTGGACCAGATaGCATATGAAGTTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: TLKTVLLFLTDTIRKLDQGSWTR*HMKFLP
Trigger: TGGCAGAAACTTCATATGTCATCTGGTCCAGCTTCC...CTGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR TCA 90 bp GCTTCCTCCAGTAATGGGTTGACACCTTTCTTTTTCTCCACACCCTGTGTAATTGGTATTTTCAACTCATaGTGGGTTTATTGGGATGTA +
Preference number: 4 (lower is better)
Translates to: ASSSNGLTPFFFSTPCVIGIFNS*WVYWDV
Trigger: TACATCCCAATAAACCCATCATGAGTTGAAAATACC...AATTACACAGGGTGTGGAGAAAAAGAAAGGTGTCAACCCATTACTGGAGGAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462772.2
ENST00000645739.1
CDS-3UTR TCA 90 bp GATACAATAAGGAAGCTGGACCAGATGACATATGAAGTTTCTGCCAGTTCTAAAAGCAATCAATTCCAGTaGAGATGGTTAGGTACGAGG +
Preference number: 4 (lower is better)
Translates to: DTIRKLDQMTYEVSASSKSNQFQ*RWLGTR
Trigger: CCTCGTACCTAACCATCTTCACTGGAATTGATTGCT...TTTAGAACTGGCAGAAACTTCATATGTCATCTGGTCCAGCTTCCTTATTGTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR TCA 90 bp GCTTCCTCCAGTAATGGGTTGACACCTTTCTTTTTCTCCACACCCTGTGTAATTTTTCCTAAATTCTGGTaGGGTAACACTTACCAAACT +
Preference number: 4 (lower is better)
Translates to: ASSSNGLTPFFFSTPCVIFPKFW*GNTYQT
Trigger: AGTTTGGTAAGTGTTACCTCACCAGAATTTAGGAAA...AATTACACAGGGTGTGGAGAAAAAGAAAGGTGTCAACCCATTACTGGAGGAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000462772.2
CDS-3UTR GCA 90 bp GATACAATAAGGAAGCTGGACCAGATGACATATGAAGTTTCTGCCAGTTCTAAAAGTTTCACCAAAGATTaGTGTCCAACAGCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: DTIRKLDQMTYEVSASSKSFTKD*CPTASS
Trigger: GGAGGAAGCTGTTGGACAGCAATCTTTGGTGAAACT...TTTAGAACTGGCAGAAACTTCATATGTCATCTGGTCCAGCTTCCTTATTGTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR GCA 90 bp TTTGCTACACTGGGAGTACAAGGAATAGCAGTTTCACCAATCCACATGTCCAGCATACAAGTTACCACTTaGGTACTGTTGTCATTTCTT +
Preference number: 4 (lower is better)
Translates to: FATLGVQGIAVSPIHMSSIQVTT*VLLSFL
Trigger: AAGAAATGACAACAGTACGCAAGTGGTAACTTGTAT...GCTGGACATGTGGATTGGTGAAACTGCTATTCCTTGTACTCCCAGTGTAGCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462772.2
CDS-3UTR CCA 90 bp CAAGCAGTAAGCAGGGAGGAGCTTAAGCAAGGACAGAGATATCCAAAGCATAGTATTAAAGAAATGAAGTaGGAGCTGCATTTACAGATG +
Preference number: 4 (lower is better)
Translates to: QAVSREELKQGQRYPKHSIKEMK*ELHLQM
Trigger: CATCTGTAAATGCAGCTCCCACTTCATTTCTTTAAT...ACTATGCTTTGGATATCTCTGTCCTTGCTTAAGCTCCTCCCTGCTTACTGCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR CCA 90 bp GCTTCCTCCAGTAATGGGTTGACACCTTTCTTTTTCTCCACACCCTGTGTAATTAAGATCCCTACAGTTTaGTACTTCAAATCCTCAATG +
Preference number: 4 (lower is better)
Translates to: ASSSNGLTPFFFSTPCVIKIPTV*YFKSSM
Trigger: CATTGAGGATTTGAAGTACCAAACTGTAGGGATCTT...AATTACACAGGGTGTGGAGAAAAAGAAAGGTGTCAACCCATTACTGGAGGAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462772.2
CDS-3UTR TCA 90 bp GACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCAGTGTTAAGGTTGCTCTaGGCTTCATCTGTTACAGTC +
Preference number: 4 (lower is better)
Translates to: DFENSITFSHRYNKEAGPVLRLL*ASSVTV
Trigger: GACTGTAACAGATGAAGCTCAGAGCAACCTTAACAC...TGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000645739.1
CDS-3UTR TCA 90 bp ACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCAGGTGTTAAGGTTGCTCTaGGCTTCATCTGTTACAGTC +
Preference number: 4 (lower is better)
Translates to: TLKTVLLFLTDTIRKLDQVLRLL*ASSVTV
Trigger: GACTGTAACAGATGAAGCTCAGAGCAACCTTAACAC...CTGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000645739.1
CDS-3UTR TCA 90 bp ACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCAGCCTCCAGTAATGGGTTaGCACCTTTCTTTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: TLKTVLLFLTDTIRKLDQPPVMG*HLSFSP
Trigger: TGGAGAAAAAGAAAGGTGTCAACCCATTACTGGAGG...CTGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR TCA 90 bp GACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCACCTCCAGTAATGGGTTaGCACCTTTCTTTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: DFENSITFSHRYNKEAGPPPVMG*HLSFSP
Trigger: TGGAGAAAAAGAAAGGTGTCAACCCATTACTGGAGG...TGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR CCA 90 bp GCTTCCTCCAGTAATGGGTTGACACCTTTCTTTTTCTCCACACCCTGTGTAATTATTAAAGAAATGAAGTaGGAGCTGCATTTACAGATG +
Preference number: 4 (lower is better)
Translates to: ASSSNGLTPFFFSTPCVIIKEMK*ELHLQM
Trigger: CATCTGTAAATGCAGCTCCCACTTCATTTCTTTAAT...AATTACACAGGGTGTGGAGAAAAAGAAAGGTGTCAACCCATTACTGGAGGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462772.2
ENST00000645739.1
CDS-3UTR CCA 90 bp GCTTCCTCCAGTAATGGGTTGACACCTTTCTTTTTCTCCACACCCTGTGTAATTGAGAGGAGATACATATaGAATTCTTTCTGTATCATC +
Preference number: 4 (lower is better)
Translates to: ASSSNGLTPFFFSTPCVIERRYI*NSFCII
Trigger: GATGATACAGAAAGAATTCCATATGTATCTCCTCTC...AATTACACAGGGTGTGGAGAAAAAGAAAGGTGTCAACCCATTACTGGAGGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462772.2
CDS-3UTR TCA 90 bp GATACAATAAGGAAGCTGGACCAGATGACATATGAAGTTTCTGCCAGTTCTAAAGTTGGTTTTTCATCCTaGGGAGCAATACGATTAACA +
Preference number: 4 (lower is better)
Translates to: DTIRKLDQMTYEVSASSKVGFSS*GAIRLT
Trigger: TGTTAATCGTATTGCTCCTCAGGATGAAAAACCAAC...TTTAGAACTGGCAGAAACTTCATATGTCATCTGGTCCAGCTTCCTTATTGTATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000272342.6
ENST00000644028.1
CDS-3UTR TCA 90 bp GATACAATAAGGAAGCTGGACCAGATGACATATGAAGTTTCTGCCAGTTCTAAAACAGGAAGTCACACATaGTTTTGTCATTATGGGTGT +
Preference number: 4 (lower is better)
Translates to: DTIRKLDQMTYEVSASSKTGSHT*FCHYGC
Trigger: ACACCCATAATGACAAAATCATGTGTGACTTCCTGT...TTTAGAACTGGCAGAAACTTCATATGTCATCTGGTCCAGCTTCCTTATTGTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272342.6
CDS-3UTR TCA 90 bp GATACAATAAGGAAGCTGGACCAGATGACATATGAAGTTTCTGCCAGTTCTAAAGTCTTATGGCATGGCTaGTTAGTACTCAATTTCTTC +
Preference number: 4 (lower is better)
Translates to: DTIRKLDQMTYEVSASSKVLWHG*LVLNFF
Trigger: GAAGAAATTGAGTACTAATCAGCCATGCCATAAGAC...TTTAGAACTGGCAGAAACTTCATATGTCATCTGGTCCAGCTTCCTTATTGTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000645739.1
CDS-3UTR TCA 90 bp GATACAATAAGGAAGCTGGACCAGATGACATATGAAGTTTCTGCCAGTTCTAAAACACCTTTGTGCAGCTaGTTTTTGCTCTTGATTTTC +
Preference number: 4 (lower is better)
Translates to: DTIRKLDQMTYEVSASSKTPLCS*FLLLIF
Trigger: GAAAATCAAGAGCAAAAATCAGCTGCACAAAGGTGT...TTTAGAACTGGCAGAAACTTCATATGTCATCTGGTCCAGCTTCCTTATTGTATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000644028.1
CDS-3UTR GCA 90 bp ACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCAGTCTGCACTGAAATGCTaGCTGGATTCAAATGCTTTG +
Preference number: 4 (lower is better)
Translates to: TLKTVLLFLTDTIRKLDQSALKC*LDSNAL
Trigger: CAAAGCATTTGAATCCAGGCAGCATTTCAGTGCAGA...CTGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272342.6
CDS-3UTR GCA 90 bp ATGACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACAGTTTCACCAAAGATTaGTGTCCAACAGCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: MTLKTVLLFLTDTIRKLDSFTKD*CPTASS
Trigger: GGAGGAAGCTGTTGGACAGCAATCTTTGGTGAAACT...GTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR GCA 90 bp ACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCAGCATTCTCCGAACCAGTaGTTCTTGTCTTTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: TLKTVLLFLTDTIRKLDQHSPNQ*FLSFSL
Trigger: CAGAGAAAAAGACAAGAAGCACTGGTTCGGAGAATG...CTGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR GCA 90 bp GACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCACATGTTTTGGGCCAGTaGCATCTATTGTTTATGGTC +
Preference number: 4 (lower is better)
Translates to: DFENSITFSHRYNKEAGPHVLGQ*HLLFMV
Trigger: GACCATAAACAATAGATGGCACTGGCCCAAAACATG...TGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000462772.2
CDS-3UTR GCA 90 bp GATACAATAAGGAAGCTGGACCAGATGACATATGAAGTTTCTGCCAGTTCTAAAAGACCTGGATACTTTTaGTGTACCTTTCAGTCACTT +
Preference number: 4 (lower is better)
Translates to: DTIRKLDQMTYEVSASSKRPGYF*CTFQSL
Trigger: AAGTGACTGAAAGGTACAGCAAAAGTATCCAGGTCT...TTTAGAACTGGCAGAAACTTCATATGTCATCTGGTCCAGCTTCCTTATTGTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462772.2
CDS-3UTR CCA 90 bp GATACAATAAGGAAGCTGGACCAGATGACATATGAAGTTTCTGCCAGTTCTAAACTTACGCCCTCTAGTTaGACTTCTATTACTGGTTTA +
Preference number: 4 (lower is better)
Translates to: DTIRKLDQMTYEVSASSKLTPSS*TSITGL
Trigger: TAAACCAGTAATAGAAGTCCAACTAGAGGGCGTAAG...TTTAGAACTGGCAGAAACTTCATATGTCATCTGGTCCAGCTTCCTTATTGTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR CCA 90 bp ACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCAGCAGGCTAGAGATATGTaGTACAACATTCTCACGATG +
Preference number: 4 (lower is better)
Translates to: TLKTVLLFLTDTIRKLDQQARDM*YNILTM
Trigger: CATCGTGAGAATGTTGTACCACATATCTCTAGCCTG...CTGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR CCA 90 bp ACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCAGTCTGTCTCTTCCACCTaGGTGACAGTAATTCTTCAA +
Preference number: 4 (lower is better)
Translates to: TLKTVLLFLTDTIRKLDQSVSST*VTVILQ
Trigger: TTGAAGAATTACTGTCACCCAGGTGGAAGAGACAGA...CTGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462772.2
CDS-3UTR TCA 90 bp GATACAATAAGGAAGCTGGACCAGATGACATATGAAGTTTCTGCCAGTTCTAAAGTCAATGGAGAATTCTaGTCCCAAAAGATATCATTC +
Preference number: 4 (lower is better)
Translates to: DTIRKLDQMTYEVSASSKVNGEF*SQKISF
Trigger: GAATGATATCTTTTGGGATCAGAATTCTCCATTGAC...TTTAGAACTGGCAGAAACTTCATATGTCATCTGGTCCAGCTTCCTTATTGTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR TCA 90 bp GACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCAGAAAGAACCTACTTTTaGTGCACTAGTCTGATTTGG +
Preference number: 4 (lower is better)
Translates to: DFENSITFSHRYNKEAGPERTYF*CTSLIW
Trigger: CCAAATCAGACTAGTGCATCAAAAGTAGGTTCTTTC...TGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000272342.6
CDS-3UTR TCA 90 bp ACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCAGGTCTTATGGCATGGCTaGTTAGTACTCAATTTCTTC +
Preference number: 4 (lower is better)
Translates to: TLKTVLLFLTDTIRKLDQVLWHG*LVLNFF
Trigger: GAAGAAATTGAGTACTAATCAGCCATGCCATAAGAC...CTGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000645739.1
CDS-3UTR TCA 90 bp ACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCAGCCATACTTTAAAGTTTaGTTCTTTCCCAGGCTAGAG +
Preference number: 4 (lower is better)
Translates to: TLKTVLLFLTDTIRKLDQPYFKV*FFPRLE
Trigger: CTCTAGCCTGGGAAAGAATCAAACTTTAAAGTATGG...CTGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR TCA 90 bp GACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCACCATACTTTAAAGTTTaGTTCTTTCCCAGGCTAGAG +
Preference number: 4 (lower is better)
Translates to: DFENSITFSHRYNKEAGPPYFKV*FFPRLE
Trigger: CTCTAGCCTGGGAAAGAATCAAACTTTAAAGTATGG...TGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR TCA 90 bp GATACAATAAGGAAGCTGGACCAGATGACATATGAAGTTTCTGCCAGTTCTAAATTGGACAATCCATGTTaGCCTAAATTAAGAACACTC +
Preference number: 4 (lower is better)
Translates to: DTIRKLDQMTYEVSASSKLDNPC*PKLRTL
Trigger: GAGTGTTCTTAATTTAGGTCAACATGGATTGTCCAA...TTTAGAACTGGCAGAAACTTCATATGTCATCTGGTCCAGCTTCCTTATTGTATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462772.2
CDS-3UTR GCA 90 bp GACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCATCTTCTTTCACATTTTaGAAAGGGATGAGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: DFENSITFSHRYNKEAGPSSFTF*KGMSRA
Trigger: TGCCCTACTCATCCCTTTGCAAAATGTGAAAGAAGA...TGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR GCA 90 bp ACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCAGTCTTCTTTCACATTTTaGAAAGGGATGAGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: TLKTVLLFLTDTIRKLDQSSFTF*KGMSRA
Trigger: TGCCCTACTCATCCCTTTGCAAAATGTGAAAGAAGA...CTGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR CCA 90 bp ATGACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACTTTCAGCGCTCTCTTTaGTGTTTCATACCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: MTLKTVLLFLTDTIRKLDFQRSL*CFIPFL
Trigger: GAGGAAAGGTATGAAACACCAAAGAGAGCGCTGAAA...GTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272342.6
ENST00000644028.1
ENST00000645739.1
CDS-3UTR CCA 90 bp GATACAATAAGGAAGCTGGACCAGATGACATATGAAGTTTCTGCCAGTTCTAAAATCATTCTGTCCATCTaGATCATTAGGAGAACTGAA +
Preference number: 4 (lower is better)
Translates to: DTIRKLDQMTYEVSASSKIILSI*IIRRTE
Trigger: TTCAGTTCTCCTAATGATCCAGATGGACAGAATGAT...TTTAGAACTGGCAGAAACTTCATATGTCATCTGGTCCAGCTTCCTTATTGTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR CCA 90 bp GATACAATAAGGAAGCTGGACCAGATGACATATGAAGTTTCTGCCAGTTCTAAACTTATTAGAAGTTTCTaGCTCCTTAGTACAGGAAGT +
Preference number: 4 (lower is better)
Translates to: DTIRKLDQMTYEVSASSKLIRSF*LLSTGS
Trigger: ACTTCCTGTACTAAGGAGCCAGAAACTTCTAATAAG...TTTAGAACTGGCAGAAACTTCATATGTCATCTGGTCCAGCTTCCTTATTGTATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272342.6
CDS-3UTR CCA 90 bp GATACAATAAGGAAGCTGGACCAGATGACATATGAAGTTTCTGCCAGTTCTAAATGCACTAGTCTGATTTaGGTTACTAACACTGGTTTT +
Preference number: 4 (lower is better)
Translates to: DTIRKLDQMTYEVSASSKCTSLI*VTNTGF
Trigger: AAAACCAGTGTTAGTAACCCAAATCAGACTAGTGCA...TTTAGAACTGGCAGAAACTTCATATGTCATCTGGTCCAGCTTCCTTATTGTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272342.6
CDS-3UTR CCA 90 bp ACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCAGGTTGCTGAGTTAGTTTaGCTCCATGTTCGGAATTAT +
Preference number: 4 (lower is better)
Translates to: TLKTVLLFLTDTIRKLDQVAELV*LHVRNY
Trigger: ATAATTCCGAACATGGAGCCAAACTAACTCAGCAAC...CTGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272342.6
CDS-3UTR CCA 90 bp ACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCAGCTTACGCCCTCTAGTTaGACTTCTATTACTGGTTTA +
Preference number: 4 (lower is better)
Translates to: TLKTVLLFLTDTIRKLDQLTPSS*TSITGL
Trigger: TAAACCAGTAATAGAAGTCCAACTAGAGGGCGTAAG...CTGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR CCA 90 bp ATGACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCAGGCTAGAGATATGTaGTACAACATTCTCACGATG +
Preference number: 4 (lower is better)
Translates to: MTLKTVLLFLTDTIRKLDQARDM*YNILTM
Trigger: CATCGTGAGAATGTTGTACCACATATCTCTAGCCTG...GTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR TCA 90 bp ATGACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACGTTGGTTTTTCATCCTaGGGAGCAATACGATTAACA +
Preference number: 4 (lower is better)
Translates to: MTLKTVLLFLTDTIRKLDVGFSS*GAIRLT
Trigger: TGTTAATCGTATTGCTCCTCAGGATGAAAAACCAAC...GTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGTCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000272342.6
ENST00000644028.1
CDS-3UTR TCA 90 bp GACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCAAGTTACATTCAAACTTaGACTTCCTGGAAGAACCAA +
Preference number: 4 (lower is better)
Translates to: DFENSITFSHRYNKEAGPSYIQT*TSWKNQ
Trigger: TTGGTTCTTCCAGGAAGTTCAAGTTTGAATGTAACT...TGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272342.6
CDS-3UTR TCA 90 bp GACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCATATCAGCAGTCTTCGTaGAGTCTTCCAACTAATATT +
Preference number: 4 (lower is better)
Translates to: DFENSITFSHRYNKEAGPYQQSS*SLPTNI
Trigger: AATATTAGTTGGAAGACTTCACGAAGACTGCTGATA...TGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR TCA 90 bp ACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCAGTATCAGCAGTCTTCGTaGAGTCTTCCAACTAATATT +
Preference number: 4 (lower is better)
Translates to: TLKTVLLFLTDTIRKLDQYQQSS*SLPTNI
Trigger: AATATTAGTTGGAAGACTTCACGAAGACTGCTGATA...CTGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR GCA 90 bp GATACAATAAGGAAGCTGGACCAGATGACATATGAAGTTTCTGCCAGTTCTAAACAAATGGCTTCTGACTaGTATTTTGATTATTTGCCA +
Preference number: 4 (lower is better)
Translates to: DTIRKLDQMTYEVSASSKQMASD*YFDYLP
Trigger: TGGCAAATAATCAAAATAGCAGTCAGAAGCCATTTG...TTTAGAACTGGCAGAAACTTCATATGTCATCTGGTCCAGCTTCCTTATTGTATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272342.6
CDS-3UTR GCA 90 bp GATACAATAAGGAAGCTGGACCAGATGACATATGAAGTTTCTGCCAGTTCTAAAAATAGCATTAAAGGCTaGTTCAGCAATTTGGTCAAA +
Preference number: 4 (lower is better)
Translates to: DTIRKLDQMTYEVSASSKNSIKG*FSNLVK
Trigger: TTTGACCAAATTGCTGAAGCAGCCTTTAATGCTATT...TTTAGAACTGGCAGAAACTTCATATGTCATCTGGTCCAGCTTCCTTATTGTATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272342.6
CDS-3UTR CCA 90 bp GATACAATAAGGAAGCTGGACCAGATGACATATGAAGTTTCTGCCAGTTCTAAACTGGAAGAACCAATTTaGAACTATTCACTTGTATTG +
Preference number: 4 (lower is better)
Translates to: DTIRKLDQMTYEVSASSKLEEPI*NYSLVL
Trigger: CAATACAAGTGAATAGTTCCAAATTGGTTCTTCCAG...TTTAGAACTGGCAGAAACTTCATATGTCATCTGGTCCAGCTTCCTTATTGTATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272342.6
CDS-3UTR CCA 90 bp GATACAATAAGGAAGCTGGACCAGATGACATATGAAGTTTCTGCCAGTTCTAAATACAGTCTTATGGCATaGCTGATTAGTACTCAATTT +
Preference number: 4 (lower is better)
Translates to: DTIRKLDQMTYEVSASSKYSLMA*LISTQF
Trigger: AAATTGAGTACTAATCAGCCATGCCATAAGACTGTA...TTTAGAACTGGCAGAAACTTCATATGTCATCTGGTCCAGCTTCCTTATTGTATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000645739.1
CDS-3UTR TCA 90 bp ATGACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACGTCAATGGAGAATTCTaGTCCCAAAAGATATCATTC +
Preference number: 4 (lower is better)
Translates to: MTLKTVLLFLTDTIRKLDVNGEF*SQKISF
Trigger: GAATGATATCTTTTGGGATCAGAATTCTCCATTGAC...GTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGTCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR TCA 90 bp ATGACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACGGTATTTTCAACTCATaGTGGGTTTATTGGGATGTA +
Preference number: 4 (lower is better)
Translates to: MTLKTVLLFLTDTIRKLDGIFNS*WVYWDV
Trigger: TACATCCCAATAAACCCATCATGAGTTGAAAATACC...GTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGTCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR CCA 90 bp ACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCAGATTAAAGAAATGAAGTaGGAGCTGCATTTACAGATG +
Preference number: 4 (lower is better)
Translates to: TLKTVLLFLTDTIRKLDQIKEMK*ELHLQM
Trigger: CATCTGTAAATGCAGCTCCCACTTCATTTCTTTAAT...CTGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR CCA 90 bp ATGACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACTATCACTATTTAGACTaGCCCACCCAAACACATTTT +
Preference number: 4 (lower is better)
Translates to: MTLKTVLLFLTDTIRKLDYHYLD*PTQTHF
Trigger: AAAATGTGTTTGGGTGGGCCAGTCTAAATAGTGATA...GTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGTCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462772.2
CDS-3UTR CCA 90 bp ATGACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACTACAGTCTTATGGCATaGCTGATTAGTACTCAATTT +
Preference number: 4 (lower is better)
Translates to: MTLKTVLLFLTDTIRKLDYSLMA*LISTQF
Trigger: AAATTGAGTACTAATCAGCCATGCCATAAGACTGTA...GTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGTCAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000645739.1
CDS CCA 90 bp TTTACTGCACAGGGCGGCGGTCGGAGGCTGCTCTCGCTGCCGCACTaGCCCGGGAGGCCCCTCTCTAGCCCCGCAGGGCCACGAACCGCG +
Preference number: 5 (lower is better)
Translates to: FTAQGGGRRLLSLPH*PGRPLSSPAGPRTA
Trigger: CGCGGTTCGTGGCCCTGCGGGGCTAGAGAGGGGCCTCCCGGGCCAGTGCGGCAGCGAGAGCAGCCTCCGACCGCCGCCCTGTGCAGTAAA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS CCA 90 bp CCCGCAGGGCCACGAACCGCGGGCCGATCTCAGCCGCCTCCTCCCTaGCTCGACCACCGAGCCGCATTCCTCCGCCGCCACTGTTTTGTG +
Preference number: 5 (lower is better)
Translates to: PAGPRTAGRSQPPPP*LDHRAAFLRRHCFV
Trigger: CACAAAACAGTGGCGGCGGAGGAATGCGGCTCGGTGGTCGAGCCAGGGAGGAGGCGGCTGAGATCGGCCCGCGGTTCGTGGCCCTGCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS GCA 90 bp CCTGGCTCGACCACCGAGCCGCATTCCTCCGCCGCCACTGTTTTGTaGGGCGTTTTCTTCGGGCTAGGGCTGTCATCATGTTTCCTTCGC +
Preference number: 5 (lower is better)
Translates to: PGSTTEPHSSAATVL*GVFFGLGLSSCFLR
Trigger: GCGAAGGAAACATGATGACAGCCCTAGCCCGAAGAAAACGCCGCACAAAACAGTGGCGGCGGAGGAATGCGGCTCGGTGGTCGAGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS TCA 90 bp GCCCGCCTCCACCAGCCGCTTCTTCTTTCACATTTTGCAAAGGGATaGGTAGGGCAACAGCACTACAAACCGCACCCCGCACCAACGGCA +
Preference number: 5 (lower is better)
Translates to: ARLHQPLLLSHFAKG*VGQQHYKPHPAPTA
Trigger: TGCCGTTGGTGCGGGGTGCGGTTTGTAGTGCTGTTGCCCTACTCATCCCTTTGCAAAATGTGAAAGAAGAAGCGGCTGGTGGAGGCGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS GCA 90 bp ATTGCCTATGGCCCGCCTCCACCAGCCGCTTCTTCTTTCACATTTTaGAAAGGGATGAGTAGGGCAACAGCACTACAAACCGCACCCCGC +
Preference number: 5 (lower is better)
Translates to: IAYGPPPPAASSFTF*KGMSRATALQTAPR
Trigger: GCGGGGTGCGGTTTGTAGTGCTGTTGCCCTACTCATCCCTTTGCAAAATGTGAAAGAAGAAGCGGCTGGTGGAGGCGGGCCATAGGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS CCA 90 bp CGGGCTAGGGCTGTCATCATGTTTCCTTCGCCGACTCATTGCCTATaGCCCGCCTCCACCAGCCGCTTCTTCTTTCACATTTTGCAAAGG +
Preference number: 5 (lower is better)
Translates to: RARAVIMFPSPTHCL*PASTSRFFFHILQR
Trigger: CCTTTGCAAAATGTGAAAGAAGAAGCGGCTGGTGGAGGCGGGCCATAGGCAATGAGTCGGCGAAGGAAACATGATGACAGCCCTAGCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS GCA 90 bp TTTCTTCGGGCTAGGGCTGTCATCATGTTTCCTTCGCCGACTCATTaGCTATGGCCCGCCTCCACCAGCCGCTTCTTCTTTCACATTTTG +
Preference number: 5 (lower is better)
Translates to: FLRARAVIMFPSPTH*LWPASTSRFFFHIL
Trigger: CAAAATGTGAAAGAAGAAGCGGCTGGTGGAGGCGGGCCATAGGCAATGAGTCGGCGAAGGAAACATGATGACAGCCCTAGCCCGAAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR CAA 90 bp CAAGCAGTAAGCAGGGAGGAGCTTAAGCAAGGACAGAGATATCCAAAGCATAGTTCCTTCGCCGACTCATaGCCTATGGCCCGCCTCCAC +
Preference number: 5 (lower is better)
Translates to: QAVSREELKQGQRYPKHSSFADS*PMARLH
Trigger: GTGGAGGCGGGCCATAGGCAATGAGTCGGCGAAGGA...ACTATGCTTTGGATATCTCTGTCCTTGCTTAAGCTCCTCCCTGCTTACTGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR CAA 90 bp AAGCATCCTCCCTGCCTTACGCCCTCTAGTTGGACTTCTATTACTGGTTTAGCATCCGCCGCCACTGTTTaGTGCGGCGTTTTCTTCGGG +
Preference number: 5 (lower is better)
Translates to: KHPPCLTPSSWTSITGLASAATV*CGVFFG
Trigger: CCCGAAGAAAACGCCGCACAAAACAGTGGCGGCGGA...TGCTAAACCAGTAATAGAAGTCCAACTAGAGGGCGTAAGGCAGGGAGGATGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR CAA 90 bp CAAGCAGTAAGCAGGGAGGAGCTTAAGCAAGGACAGAGATATCCAAAGCATAGTTCCGCCGCCACTGTTTaGTGCGGCGTTTTCTTCGGG +
Preference number: 5 (lower is better)
Translates to: QAVSREELKQGQRYPKHSSAATV*CGVFFG
Trigger: CCCGAAGAAAACGCCGCACAAAACAGTGGCGGCGGA...ACTATGCTTTGGATATCTCTGTCCTTGCTTAAGCTCCTCCCTGCTTACTGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR CAA 90 bp GACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCATCCTTCGCCGACTCATaGCCTATGGCCCGCCTCCAC +
Preference number: 5 (lower is better)
Translates to: DFENSITFSHRYNKEAGPSFADS*PMARLH
Trigger: GTGGAGGCGGGCCATAGGCAATGAGTCGGCGAAGGA...TGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR CAA 90 bp AAGCATCCTCCCTGCCTTACGCCCTCTAGTTGGACTTCTATTACTGGTTTAGCAGCATCCAGCACAATATaGGGCATACCAGTGTCAGTA +
Preference number: 5 (lower is better)
Translates to: KHPPCLTPSSWTSITGLAASSTI*GIPVSV
Trigger: TACTGACACTGGTATGCCCAATATTGTGCTGGATGC...TGCTAAACCAGTAATAGAAGTCCAACTAGAGGGCGTAAGGCAGGGAGGATGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462772.2
CDS-3UTR CAA 90 bp ACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCAGTCCGCCGCCACTGTTTaGTGCGGCGTTTTCTTCGGG +
Preference number: 5 (lower is better)
Translates to: TLKTVLLFLTDTIRKLDQSAATV*CGVFFG
Trigger: CCCGAAGAAAACGCCGCACAAAACAGTGGCGGCGGA...CTGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR CAA 90 bp AAGCATCCTCCCTGCCTTACGCCCTCTAGTTGGACTTCTATTACTGGTTTAGCAACCTGGCATCTGGACTaGTATTTGCTCTTGACGTAT +
Preference number: 5 (lower is better)
Translates to: KHPPCLTPSSWTSITGLATWHLD*YLLLTY
Trigger: ATACGTCAAGAGCAAATACAAGTCCAGATGCCAGGT...TGCTAAACCAGTAATAGAAGTCCAACTAGAGGGCGTAAGGCAGGGAGGATGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272342.6
CDS-3UTR CAA 90 bp AAGCATCCTCCCTGCCTTACGCCCTCTAGTTGGACTTCTATTACTGGTTTAGCAAAGTTTCACCAAAGATaGCTGTCCAACAGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: KHPPCLTPSSWTSITGLAKFHQR*LSNSFL
Trigger: GAGGAAGCTGTTGGACAGCAATCTTTGGTGAAACTT...TGCTAAACCAGTAATAGAAGTCCAACTAGAGGGCGTAAGGCAGGGAGGATGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS TCA 90 bp GTTTCACCAAAGATTGCTGTCCAACAGCTTCCTCCAGTAATGGGTTaGCACCTTTCTTTTTCTCCACACCTTTGTGCAGCTGATTTTTGC +
Preference number: 5 (lower is better)
Translates to: VSPKIAVQQLPPVMG*HLSFSPHLCAADFC
Trigger: GCAAAAATCAGCTGCACAAAGGTGTGGAGAAAAAGAAAGGTGTCAACCCATTACTGGAGGAAGCTGTTGGACAGCAATCTTTGGTGAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000644028.1
CDS-3UTR CAA 90 bp CAAGCAGTAAGCAGGGAGGAGCTTAAGCAAGGACAGAGATATCCAAAGCATAGTAGGCATGTCGATATTTaGCATAGCAAAAGGTTCACT +
Preference number: 5 (lower is better)
Translates to: QAVSREELKQGQRYPKHSRHVDI*HSKRFT
Trigger: AGTGAACCTTTTGCTATGCAAAATATCGACATGCCT...ACTATGCTTTGGATATCTCTGTCCTTGCTTAAGCTCCTCCCTGCTTACTGCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272342.6
CDS-3UTR CAA 90 bp CAAGCAGTAAGCAGGGAGGAGCTTAAGCAAGGACAGAGATATCCAAAGCATAGTCTATTTGTGAGCTATTaGTCAAAGATGTCTGCACTG +
Preference number: 5 (lower is better)
Translates to: QAVSREELKQGQRYPKHSLFVSY*SKMSAL
Trigger: CAGTGCAGACATCTTTGACAAATAGCTCACAAATAG...ACTATGCTTTGGATATCTCTGTCCTTGCTTAAGCTCCTCCCTGCTTACTGCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272342.6
CDS-3UTR CAA 90 bp GATACAATAAGGAAGCTGGACCAGATGACATATGAAGTTTCTGCCAGTTCTAAAGGCTGCTTCAGCAATTaGGTCAAATGGCTTCTGACT +
Preference number: 5 (lower is better)
Translates to: DTIRKLDQMTYEVSASSKGCFSN*VKWLLT
Trigger: AGTCAGAAGCCATTTGACCAAATTGCTGAAGCAGCC...TTTAGAACTGGCAGAAACTTCATATGTCATCTGGTCCAGCTTCCTTATTGTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272342.6
CDS-3UTR CAA 90 bp CAAGCAGTAAGCAGGGAGGAGCTTAAGCAAGGACAGAGATATCCAAAGCATAGTATAGCAAACATGTTTTaGGCTCCATGTTCGGAATTA +
Preference number: 5 (lower is better)
Translates to: QAVSREELKQGQRYPKHSIANMF*APCSEL
Trigger: TAATTCCGAACATGGAGCCAAAAACATGTTTGCTAT...ACTATGCTTTGGATATCTCTGTCCTTGCTTAAGCTCCTCCCTGCTTACTGCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272342.6
CDS-3UTR CAA 90 bp CAAGCAGTAAGCAGGGAGGAGCTTAAGCAAGGACAGAGATATCCAAAGCATAGTGCTAATATAAGTGATTaGAGCATGTTTAAGGTAGGC +
Preference number: 5 (lower is better)
Translates to: QAVSREELKQGQRYPKHSANISD*SMFKVG
Trigger: GCCTACCTTAAACATGCTCAAATCACTTATATTAGC...ACTATGCTTTGGATATCTCTGTCCTTGCTTAAGCTCCTCCCTGCTTACTGCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR CAA 90 bp GACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCATTTTCAGCGCTCTCTTaGGTGTTTCATACCCTCGGG +
Preference number: 5 (lower is better)
Translates to: DFENSITFSHRYNKEAGPFSALS*VFHTLG
Trigger: CCCGAGGGTATGAAACACCAAAGAGAGCGCTGAAAA...TGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000462772.2
CDS-3UTR CAA 90 bp TTTGCTACACTGGGAGTACAAGGAATAGCAGTTTCACCAATCCACATGTCCAGCTATACAAGTTACCACTaGCGTACTGTTGTCATTTCT +
Preference number: 5 (lower is better)
Translates to: FATLGVQGIAVSPIHMSSYTSYH*RTVVIS
Trigger: AGAAATGACAACAGTACGCAAGTGGTAACTTGTATA...GCTGGACATGTGGATTGGTGAAACTGCTATTCCTTGTACTCCCAGTGTAGCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462772.2
CDS-3UTR CAA 90 bp CAAGCAGTAAGCAGGGAGGAGCTTAAGCAAGGACAGAGATATCCAAAGCATAGTAAAGATCCCTACAGTTaGGTACTTCAAATCCTCAAT +
Preference number: 5 (lower is better)
Translates to: QAVSREELKQGQRYPKHSKDPYS*VLQILN
Trigger: ATTGAGGATTTGAAGTACCAAACTGTAGGGATCTTT...ACTATGCTTTGGATATCTCTGTCCTTGCTTAAGCTCCTCCCTGCTTACTGCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462772.2
CDS-3UTR CAA 90 bp CAAGCAGTAAGCAGGGAGGAGCTTAAGCAAGGACAGAGATATCCAAAGCATAGTCAGAAATCATCAGAATaGAGAGGAGATACATATGGA +
Preference number: 5 (lower is better)
Translates to: QAVSREELKQGQRYPKHSQKSSE*RGDTYG
Trigger: TCCATATGTATCTCCTCTCAATTCTGATGATTTCTG...ACTATGCTTTGGATATCTCTGTCCTTGCTTAAGCTCCTCCCTGCTTACTGCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462772.2
CDS TCA 90 bp CAAAAAGCCTCTGGCAGTTCTTGGCTTAACTGTCCGCTACATTTCTaGGTAGAACCATCAAAAATAGCATTAAAGGCTGCTTCAGCAATT +
Preference number: 5 (lower is better)
Translates to: QKASGSSWLNCPLHF*VEPSKIALKAASAI
Trigger: AATTGCTGAAGCAGCCTTTAATGCTATTTTTGATGGTTCTACTCAGAAATGTAGCGGACAGTTAAGCCAAGAACTGCCAGAGGCTTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000272342.6
CDS-3UTR CAA 90 bp GATACAATAAGGAAGCTGGACCAGATGACATATGAAGTTTCTGCCAGTTCTAAAAAGTTTCACCAAAGATaGCTGTCCAACAGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: DTIRKLDQMTYEVSASSKKFHQR*LSNSFL
Trigger: GAGGAAGCTGTTGGACAGCAATCTTTGGTGAAACTT...TTTAGAACTGGCAGAAACTTCATATGTCATCTGGTCCAGCTTCCTTATTGTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR CAA 90 bp GCTTCCTCCAGTAATGGGTTGACACCTTTCTTTTTCTCCACACCCTGTGTAATTAAGTTACATTCAAACTaGAACTTCTTTGTGCAGCTG +
Preference number: 5 (lower is better)
Translates to: ASSSNGLTPFFFSTPCVIKLHSN*NFFVQL
Trigger: CAGCTGCACAAAGAAGTTCAAGTTTGAATGTAACTT...AATTACACAGGGTGTGGAGAAAAAGAAAGGTGTCAACCCATTACTGGAGGAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000462772.2
ENST00000645739.1
CDS-3UTR CAA 90 bp GATACAATAAGGAAGCTGGACCAGATGACATATGAAGTTTCTGCCAGTTCTAAATTTTCAGCGCTCTCTTaGGTGTTTCATACCTTTCCT +
Preference number: 5 (lower is better)
Translates to: DTIRKLDQMTYEVSASSKFSALS*VFHTFP
Trigger: AGGAAAGGTATGAAACACCAAAGAGAGCGCTGAAAA...TTTAGAACTGGCAGAAACTTCATATGTCATCTGGTCCAGCTTCCTTATTGTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000272342.6
ENST00000644028.1
ENST00000645739.1
CDS-3UTR CAA 90 bp GATACAATAAGGAAGCTGGACCAGATGACATATGAAGTTTCTGCCAGTTCTAAATTTGCCACAGATATCTaGGTGTTTCCTTTGATTGGC +
Preference number: 5 (lower is better)
Translates to: DTIRKLDQMTYEVSASSKFATDI*VFPLIG
Trigger: GCCAATCAAAGGAAACACCAAGATATCTGTGGCAAA...TTTAGAACTGGCAGAAACTTCATATGTCATCTGGTCCAGCTTCCTTATTGTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272342.6
CDS-3UTR CAA 90 bp GACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCAAAGTTTCACCAAAGATaGCTGTCCAACAGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: DFENSITFSHRYNKEAGPKFHQR*LSNSFL
Trigger: GAGGAAGCTGTTGGACAGCAATCTTTGGTGAAACTT...TGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR CAA 90 bp GACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCATTTTCAGCGCTCTCTTaGGTGTTTCATACCTTTCCT +
Preference number: 5 (lower is better)
Translates to: DFENSITFSHRYNKEAGPFSALS*VFHTFP
Trigger: AGGAAAGGTATGAAACACCAAAGAGAGCGCTGAAAA...TGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272342.6
ENST00000644028.1
ENST00000645739.1
CDS-3UTR CAA 90 bp ACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCAGTTTTCAGCGCTCTCTTaGGTGTTTCATACCTTTCCT +
Preference number: 5 (lower is better)
Translates to: TLKTVLLFLTDTIRKLDQFSALS*VFHTFP
Trigger: AGGAAAGGTATGAAACACCAAAGAGAGCGCTGAAAA...CTGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000272342.6
ENST00000644028.1
ENST00000645739.1
CDS-3UTR CAA 90 bp ACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCAGCTCTTGATTTTCCTTTaGCTACACTGGGAGTACAAG +
Preference number: 5 (lower is better)
Translates to: TLKTVLLFLTDTIRKLDQLLIFL*LHWEYK
Trigger: CTTGTACTCCCAGTGTAGCAAAAGGAAAATCAAGAG...CTGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR CAA 90 bp GACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCACTCTTGATTTTCCTTTaGCTACACTGGGAGTACAAG +
Preference number: 5 (lower is better)
Translates to: DFENSITFSHRYNKEAGPLLIFL*LHWEYK
Trigger: CTTGTACTCCCAGTGTAGCAAAAGGAAAATCAAGAG...TGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR CAA 90 bp ATGACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACAAGTTTCACCAAAGATaGCTGTCCAACAGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: MTLKTVLLFLTDTIRKLDKFHQR*LSNSFL
Trigger: GAGGAAGCTGTTGGACAGCAATCTTTGGTGAAACTT...GTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR CAA 90 bp GATACAATAAGGAAGCTGGACCAGATGACATATGAAGTTTCTGCCAGTTCTAAAACCACTTGCGTACTGTaGTCATTTCTTTATATGAGC +
Preference number: 5 (lower is better)
Translates to: DTIRKLDQMTYEVSASSKTTCVL*SFLYMS
Trigger: GCTCATATAAAGAAATGACAACAGTACGCAAGTGGT...TTTAGAACTGGCAGAAACTTCATATGTCATCTGGTCCAGCTTCCTTATTGTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462772.2
CDS GCA 90 bp TCCGCTACATTTCTGAGTAGAACCATCAAAAATAGCATTAAAGGCTaGTTCAGCAATTTGGTCAAATGGCTTCTGACTGCTATTTTGATT +
Preference number: 5 (lower is better)
Translates to: SATFLSRTIKNSIKG*FSNLVKWLLTAILI
Trigger: AATCAAAATAGCAGTCAGAAGCCATTTGACCAAATTGCTGAAGCAGCCTTTAATGCTATTTTTGATGGTTCTACTCAGAAATGTAGCGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272342.6
CDS-3UTR CAA 90 bp ATGACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCTCTTGATTTTCCTTTaGCTACACTGGGAGTACAAG +
Preference number: 5 (lower is better)
Translates to: MTLKTVLLFLTDTIRKLDLLIFL*LHWEYK
Trigger: CTTGTACTCCCAGTGTAGCAAAAGGAAAATCAAGAG...GTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR CAA 90 bp GACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCAGGTACAAATTTCCTTTaGATCAGTAACATGGGCTGT +
Preference number: 5 (lower is better)
Translates to: DFENSITFSHRYNKEAGPGTNFL*ISNMGC
Trigger: ACAGCCCATGTTACTGATCAAAAGGAAATTTGTACC...TGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272342.6
CDS-3UTR CAA 90 bp GACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCACTTTCTCCATCTTCATaGGCTTATCTATTTGTGAGC +
Preference number: 5 (lower is better)
Translates to: DFENSITFSHRYNKEAGPLSPSS*AYLFVS
Trigger: GCTCACAAATAGATAAGCCAATGAAGATGGAGAAAG...TGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272342.6
CDS-3UTR CAA 90 bp GATACAATAAGGAAGCTGGACCAGATGACATATGAAGTTTCTGCCAGTTCTAAACCTGGAAGAACCAATTaGGAACTATTCACTTGTATT +
Preference number: 5 (lower is better)
Translates to: DTIRKLDQMTYEVSASSKPGRTN*ELFTCI
Trigger: AATACAAGTGAATAGTTCCAAATTGGTTCTTCCAGG...TTTAGAACTGGCAGAAACTTCATATGTCATCTGGTCCAGCTTCCTTATTGTATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272342.6
CDS-3UTR CAA 90 bp ATGACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCCGAACCAGTGCTTCTaGTCTTTTTCTCTGAATTTC +
Preference number: 5 (lower is better)
Translates to: MTLKTVLLFLTDTIRKLDPNQCF*SFSLNF
Trigger: GAAATTCAGAGAAAAAGACAAGAAGCACTGGTTCGG...GTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR CAA 90 bp ACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCAGGAACAGTTTCACGTATaGAGCCTTTGCTTCTTAGTA +
Preference number: 5 (lower is better)
Translates to: TLKTVLLFLTDTIRKLDQEQFHV*SLCFLV
Trigger: TACTAAGAAGCAAAGGCTCAATACGTGAAACTGTTC...CTGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462772.2
CDS-3UTR CAA 90 bp ACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCAGAGCAACAGAGTTGTTTaGACTGTGCTAGGTGTAATT +
Preference number: 5 (lower is better)
Translates to: TLKTVLLFLTDTIRKLDQSNRVV*TVLGVI
Trigger: AATTACACCTAGCACAGTCAAAACAACTCTGTTGCT...CTGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462772.2
CDS TCA 90 bp TTGTTGTTGGTTTTTCATCCTAACTGCTTTGTCAATGGAGAATTCTaGTCCCAAAAGATATCATTCTGTCCATCTGGATCATTAGGAGAA +
Preference number: 5 (lower is better)
Translates to: LLLVFHPNCFVNGEF*SQKISFCPSGSLGE
Trigger: TTCTCCTAATGATCCAGATGGACAGAATGATATCTTTTGGGATCAGAATTCTCCATTGACAAAGCAGTTAGGATGAAAAACCAACAACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645739.1
CDS CCA 90 bp ACCATCAAAAATAGCATTAAAGGCTGCTTCAGCAATTTGGTCAAATaGCTTCTGACTGCTATTTTGATTATTTGCCACAGATATCTTGGT +
Preference number: 5 (lower is better)
Translates to: TIKNSIKGCFSNLVK*LLTAILIICHRYLG
Trigger: ACCAAGATATCTGTGGCAAATAATCAAAATAGCAGTCAGAAGCCATTTGACCAAATTGCTGAAGCAGCCTTTAATGCTATTTTTGATGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272342.6
CDS-3UTR CAA 90 bp ACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCAGGATCTTGTAATACTTTaGAATCTCCTAACCTGGCAT +
Preference number: 5 (lower is better)
Translates to: TLKTVLLFLTDTIRKLDQDLVIL*NLLTWH
Trigger: ATGCCAGGTTAGGAGATTCAAAAGTATTACAAGATC...CTGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000272342.6
CDS-3UTR CAA 90 bp GACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCAGCTAATATAAGTGATTaGAGCATGTTTAAGGTAGGC +
Preference number: 5 (lower is better)
Translates to: DFENSITFSHRYNKEAGPANISD*SMFKVG
Trigger: GCCTACCTTAAACATGCTCAAATCACTTATATTAGC...TGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS-3UTR CAA 90 bp GACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCAAGTTACTGGATTGCTTaGTGTCAAATGATTGACTTG +
Preference number: 5 (lower is better)
Translates to: DFENSITFSHRYNKEAGPSYWIA*CQMIDL
Trigger: CAAGTCAATCATTTGACACAAAGCAATCCAGTAACT...TGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462772.2
CDS-3UTR CAA 90 bp ACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCAGAAGTTACATTCAAACTaGAACTTCTTTGTGCAGCTG +
Preference number: 5 (lower is better)
Translates to: TLKTVLLFLTDTIRKLDQKLHSN*NFFVQL
Trigger: CAGCTGCACAAAGAAGTTCAAGTTTGAATGTAACTT...CTGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000462772.2
ENST00000645739.1
CDS-3UTR CAA 90 bp GACTTTGAAAACAGTATTACTTTTTCTCACCGATACAATAAGGAAGCTGGACCATTCATCCTAACTGCTTaGTCAATGGAGAATTCTGAT +
Preference number: 5 (lower is better)
Translates to: DFENSITFSHRYNKEAGPFILTA*SMENSD
Trigger: ATCAGAATTCTCCATTGACAAAGCAGTTAGGATGAA...TGGTCCAGCTTCCTTATTGTATCGGTGAGAAAAAGTAATACTGTTTTCAAAGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645739.1
CDS GCA 90 bp TATCTATTTGTGAGCTATTTGTCAAAGATGTCTGCACTGAAATGCTaGCTGGATTCAAATGCTTTGATTGTACCAAATTACTTCCTTGTT +
Preference number: 5 (lower is better)
Translates to: YLFVSYLSKMSALKC*LDSNALIVPNYFLV
Trigger: AACAAGGAAGTAATTTGGTACAATCAAAGCATTTGAATCCAGGCAGCATTTCAGTGCAGACATCTTTGACAAATAGCTCACAAATAGATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272342.6
CDS GCA 72 bp TTACTGCACAGGGCGGCGGTCGGAGGCTGCTCTCGCTaGCGCACTGGCCCGGGAGGCCCCTCTCTAGCCCCG +
Preference number: 6 (lower is better)
Translates to: LLHRAAVGGCSR*RTGPGGPSLAP
Trigger: CGGGGCTAGAGAGGGGCCTCCCGGGCCAGTGCGGCAGCGAGAGCAGCCTCCGACCGCCGCCCTGTGCAGTAA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS GCA 72 bp GGGTTACTTTTACTGCACAGGGCGGCGGTCGGAGGCTaGTCTCGCTGCCGCACTGGCCCGGGAGGCCCCTCT +
Preference number: 6 (lower is better)
Translates to: GLLLLHRAAVGG*SRCRTGPGGPS
Trigger: AGAGGGGCCTCCCGGGCCAGTGCGGCAGCGAGAGCAGCCTCCGACCGCCGCCCTGTGCAGTAAAAGTAACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS CAA 72 bp TCGACCACCGAGCCGCATTCCTCCGCCGCCACTGTTTaGTGCGGCGTTTTCTTCGGGCTAGGGCTGTCATCA +
Preference number: 6 (lower is better)
Translates to: STTEPHSSAATV*CGVFFGLGLSS
Trigger: TGATGACAGCCCTAGCCCGAAGAAAACGCCGCACAAAACAGTGGCGGCGGAGGAATGCGGCTCGGTGGTCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS CAA 90 bp CTCCCTGGCTCGACCACCGAGCCGCATTCCTCCGCCGCCACTGTTTaGTGCGGCGTTTTCTTCGGGCTAGGGCTGTCATCATGTTTCCTT +
Preference number: 6 (lower is better)
Translates to: LPGSTTEPHSSAATV*CGVFFGLGLSSCFL
Trigger: AAGGAAACATGATGACAGCCCTAGCCCGAAGAAAACGCCGCACAAAACAGTGGCGGCGGAGGAATGCGGCTCGGTGGTCGAGCCAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS GCA 72 bp ACCACCGAGCCGCATTCCTCCGCCGCCACTGTTTTGTaGGGCGTTTTCTTCGGGCTAGGGCTGTCATCATGT +
Preference number: 6 (lower is better)
Translates to: TTEPHSSAATVL*GVFFGLGLSSC
Trigger: ACATGATGACAGCCCTAGCCCGAAGAAAACGCCGCACAAAACAGTGGCGGCGGAGGAATGCGGCTCGGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS GCA 72 bp CTCTTTGGTGTTTCATACCCTCGGGGTTACTTTTACTaGACAGGGCGGCGGTCGGAGGCTGCTCTCGCTGCC +
Preference number: 6 (lower is better)
Translates to: LFGVSYPRGYFY*TGRRSEAALAA
Trigger: GGCAGCGAGAGCAGCCTCCGACCGCCGCCCTGTGCAGTAAAAGTAACCCCGAGGGTATGAAACACCAAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462772.2
CDS GCA 72 bp TTGGTGTTTCATACCTTTCCTCGGGGTTACTTTTACTaGACAGGGCGGCGGTCGGAGGCTGCTCTCGCTGCC +
Preference number: 6 (lower is better)
Translates to: LVFHTFPRGYFY*TGRRSEAALAA
Trigger: GGCAGCGAGAGCAGCCTCCGACCGCCGCCCTGTGCAGTAAAAGTAACCCCGAGGAAAGGTATGAAACACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000272342.6
ENST00000644028.1
ENST00000645739.1
CDS GCA 72 bp GCTAGGGCTGTCATCATGTTTCCTTCGCCGACTCATTaGCTATGGCCCGCCTCCACCAGCCGCTTCTTCTTT +
Preference number: 6 (lower is better)
Translates to: ARAVIMFPSPTH*LWPASTSRFFF
Trigger: AAAGAAGAAGCGGCTGGTGGAGGCGGGCCATAGGCAATGAGTCGGCGAAGGAAACATGATGACAGCCCTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS CCA 72 bp GCTGTCATCATGTTTCCTTCGCCGACTCATTGCCTATaGCCCGCCTCCACCAGCCGCTTCTTCTTTCACATT +
Preference number: 6 (lower is better)
Translates to: AVIMFPSPTHCL*PASTSRFFFHI
Trigger: AATGTGAAAGAAGAAGCGGCTGGTGGAGGCGGGCCATAGGCAATGAGTCGGCGAAGGAAACATGATGACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS TCA 72 bp CACCAGCCGCTTCTTCTTTCACATTTTGCAAAGGGATaGGTAGGGCAACAGCACTACAAACCGCACCCCGCA +
Preference number: 6 (lower is better)
Translates to: HQPLLLSHFAKG*VGQQHYKPHPA
Trigger: TGCGGGGTGCGGTTTGTAGTGCTGTTGCCCTACTCATCCCTTTGCAAAATGTGAAAGAAGAAGCGGCTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000272342.6
ENST00000462772.2
ENST00000644028.1
ENST00000645739.1
CDS TCA 72 bp AAGATTGCTGTCCAACAGCTTCCTCCAGTAATGGGTTaGCACCTTTCTTTTTCTCCACACCTTTGTGCAGCT +
Preference number: 6 (lower is better)
Translates to: KIAVQQLPPVMG*HLSFSPHLCAA
Trigger: AGCTGCACAAAGGTGTGGAGAAAAAGAAAGGTGTCAACCCATTACTGGAGGAAGCTGTTGGACAGCAATCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644028.1
CDS TCA 72 bp TCTGGCAGTTCTTGGCTTAACTGTCCGCTACATTTCTaGGTAGAACCATCAAAAATAGCATTAAAGGCTGCT +
Preference number: 6 (lower is better)
Translates to: SGSSWLNCPLHF*VEPSKIALKAA
Trigger: AGCAGCCTTTAATGCTATTTTTGATGGTTCTACTCAGAAATGTAGCGGACAGTTAAGCCAAGAACTGCCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272342.6
CDS CAA 90 bp TTTCCCCTTTCTCCATCTTCATTGGCTTATCTATTTGTGAGCTATTaGTCAAAGATGTCTGCACTGAAATGCTGCCTGGATTCAAATGCT +
Preference number: 6 (lower is better)
Translates to: FPLSPSSLAYLFVSY*SKMSALKCCLDSNA
Trigger: AGCATTTGAATCCAGGCAGCATTTCAGTGCAGACATCTTTGACAAATAGCTCACAAATAGATAAGCCAATGAAGATGGAGAAAGGGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272342.6
CDS CAA 90 bp AAAGGCTGCTTCAGCAATTTGGTCAAATGGCTTCTGACTGCTATTTaGATTATTTGCCACAGATATCTTGGTGTTTCCTTTGATTGGCTT +
Preference number: 6 (lower is better)
Translates to: KGCFSNLVKWLLTAI*IICHRYLGVSFDWL
Trigger: AAGCCAATCAAAGGAAACACCAAGATATCTGTGGCAAATAATCAAAATAGCAGTCAGAAGCCATTTGACCAAATTGCTGAAGCAGCCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272342.6
CDS TCA 72 bp AGAAGTTTCTGGCTCCTTAGTACAGGAAGTCACACATaGTTTTGTCATTATGGGTGTATCTACTTGAGAAGA +
Preference number: 6 (lower is better)
Translates to: RSFWLLSTGSHT*FCHYGCIYLRR
Trigger: TCTTCTCAAGTAGATACACCCATAATGACAAAATCATGTGTGACTTCCTGTACTAAGGAGCCAGAAACTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000272342.6
CDS GCA 72 bp TTTCTGAGTAGAACCATCAAAAATAGCATTAAAGGCTaGTTCAGCAATTTGGTCAAATGGCTTCTGACTGCT +
Preference number: 6 (lower is better)
Translates to: FLSRTIKNSIKG*FSNLVKWLLTA
Trigger: AGCAGTCAGAAGCCATTTGACCAAATTGCTGAAGCAGCCTTTAATGCTATTTTTGATGGTTCTACTCAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000272342.6
CDS GCA 72 bp GTGAGCTATTTGTCAAAGATGTCTGCACTGAAATGCTaGCTGGATTCAAATGCTTTGATTGTACCAAATTAC +
Preference number: 6 (lower is better)
Translates to: VSYLSKMSALKC*LDSNALIVPNY
Trigger: GTAATTTGGTACAATCAAAGCATTTGAATCCAGGCAGCATTTCAGTGCAGACATCTTTGACAAATAGCTCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272342.6
CDS TCA 72 bp TCATCAAAGAAAGAACCTACTTTTGATGCACTAGTCTaGTTTGGGTTACTAACACTGGTTTTACTGCCTAGA +
Preference number: 6 (lower is better)
Translates to: SSKKEPTFDALV*FGLLTLVLLPR
Trigger: TCTAGGCAGTAAAACCAGTGTTAGTAACCCAAATCAGACTAGTGCATCAAAAGTAGGTTCTTTCTTTGATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000272342.6
CDS TCA 72 bp GTTTTTCATCCTAACTGCTTTGTCAATGGAGAATTCTaGTCCCAAAAGATATCATTCTGTCCATCTGGATCA +
Preference number: 6 (lower is better)
Translates to: VFHPNCFVNGEF*SQKISFCPSGS
Trigger: TGATCCAGATGGACAGAATGATATCTTTTGGGATCAGAATTCTCCATTGACAAAGCAGTTAGGATGAAAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645739.1
CDS GCA 72 bp TTTGTGAGCTATTTGTCAAAGATGTCTGCACTGAAATaGTGCCTGGATTCAAATGCTTTGATTGTACCAAAT +
Preference number: 6 (lower is better)
Translates to: FVSYLSKMSALK*CLDSNALIVPN
Trigger: ATTTGGTACAATCAAAGCATTTGAATCCAGGCAGCATTTCAGTGCAGACATCTTTGACAAATAGCTCACAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000272342.6