RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ESYT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000139641

Ensembl transcript IDs: ENST00000267113.4, ENST00000394048.10, ENST00000547667.5, ENST00000548142.1, ENST00000550179.1, ENST00000550515.1, ENST00000550878.5, ENST00000550986.1, ENST00000551112.1, ENST00000551790.5

Found 339 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGATACAGAAGGCCCTGAGGAGTTGGGAGGAAGGGAGAACAATGTaGAGGCAAAGCAGGAAACAGCCAGCTCAGGTCCCCGCCCCAGGG +
Preference number: 1 (lower is better)
Translates to: QIQKALRSWEEGRTM*RQSRKQPAQVPAPG
Trigger: CCCTGGGGCGGGGACCTGAGCTGGCTGTTTCCTGCTTTGCCTGCACATTGTTCTCCCTTCCTCCCAACTCCTCAGGGCCTTCTGTATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394048.10
3UTR TCA 90 bp GCTCTGCCCTTGGACCCTAGCTTTAGGCTCATCACATTGAGGCGGTaGTGGAGCGAGACGAAGGCAGGAAGACAGAGCAGTCAGGCTGGG +
Preference number: 1 (lower is better)
Translates to: ALPLDPSFRLITLRR*WSETKAGRQSSQAG
Trigger: CCCAGCCTGACTGCTCTGTCTTCCTGCCTTCGTCTCGCTCCATCACCGCCTCAATGTGATGAGCCTAAAGCTAGGGTCCAAGGGCAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
3UTR CCA 90 bp AGTGCTGCCACTGGCCAGGCACAGATACAGAAGGCCCTGAGGAGTTaGGAGGAAGGGAGAACAATGTGCAGGCAAAGCAGGAAACAGCCA +
Preference number: 1 (lower is better)
Translates to: SAATGQAQIQKALRS*EEGRTMCRQSRKQP
Trigger: TGGCTGTTTCCTGCTTTGCCTGCACATTGTTCTCCCTTCCTCCCAACTCCTCAGGGCCTTCTGTATCTGTGCCTGGCCAGTGGCAGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394048.10
3UTR TCA 90 bp GTTGAGGACAGTGGGGACAGAACTGGACATGGGGGCCTGAGCTGCTaGACATTTGCTACATGCAGTAGTCTAAGAGGCTCACAGCTGGAG +
Preference number: 1 (lower is better)
Translates to: VEDSGDRTGHGGLSC*TFATCSSLRGSQLE
Trigger: CTCCAGCTGTGAGCCTCTTAGACTACTGCATGTAGCAAATGTTCAGCAGCTCAGGCCCCCATGTCCAGTTCTGTCCCCACTGTCCTCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394048.10
3UTR CCA 90 bp AAGGATAAAGGCCGTGCAGTAAAGGGAACATACGGTTCTTCTCTTTaGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGGCT +
Preference number: 1 (lower is better)
Translates to: KDKGRAVKGTYGSSL*SGKGPNMGLLGERA
Trigger: AGCCCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGAAGAACCGTATGTTCCCTTTACTGCACGGCCTTTATCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394048.10
3UTR-3UTR TCA 90 bp CCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGATCACATTGAGGCGGTaGTGGAGCGAGACGAAGGCA +
Preference number: 2 (lower is better)
Translates to: PNMGLLGERAEGHRLCPWITLRR*WSETKA
Trigger: TGCCTTCGTCTCGCTCCATCACCGCCTCAATGTGAT...CCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
3UTR-3UTR CCA 90 bp GGTTCTTCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGCACAGGCTCTGCCCTTaGACCCTAGCTTTAGGCTCA +
Preference number: 2 (lower is better)
Translates to: GSSLWSGKGPNMGLLGERHRLCP*TLALGS
Trigger: TGAGCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTG...CCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGAAGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
3UTR TCA 72 bp CTCTGCCCTTGGACCCTAGCTTTAGGCTCATCACATTaGGGCGGTGATGGAGCGAGACGAAGGCAGGAAGAC +
Preference number: 3 (lower is better)
Translates to: LCPWTLALGSSH*GGDGARRRQED
Trigger: GTCTTCCTGCCTTCGTCTCGCTCCATCACCGCCTCAATGTGATGAGCCTAAAGCTAGGGTCCAAGGGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
3UTR-3UTR CAA 90 bp GGTTCTTCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGGCACAGGCTCTGCCCTaGGACCCTAGCTTTAGGCTC +
Preference number: 3 (lower is better)
Translates to: GSSLWSGKGPNMGLLGERAQALP*DPSFRL
Trigger: GAGCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGC...CCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGAAGAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
3UTR-3UTR CAA 90 bp AACATACGGTTCTTCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGGCACAGGCTCTGCCCTaGGACCCTAGCTTTAGGCTC +
Preference number: 3 (lower is better)
Translates to: NIRFFSLVRQRPEYGPVRAQALP*DPSFRL
Trigger: GAGCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGC...CCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGAAGAACCGTATGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
3UTR TCA 72 bp AGTGGGGACAGAACTGGACATGGGGGCCTGAGCTGCTaGACATTTGCTACATGCAGTAGTCTAAGAGGCTCA +
Preference number: 3 (lower is better)
Translates to: SGDRTGHGGLSC*TFATCSSLRGS
Trigger: TGAGCCTCTTAGACTACTGCATGTAGCAAATGTTCAGCAGCTCAGGCCCCCATGTCCAGTTCTGTCCCCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394048.10
3UTR CCA 72 bp GGCCGTGCAGTAAAGGGAACATACGGTTCTTCTCTTTaGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGT +
Preference number: 3 (lower is better)
Translates to: GRAVKGTYGSSL*SGKGPNMGLLG
Trigger: ACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGAAGAACCGTATGTTCCCTTTACTGCACGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394048.10
CDS-3UTR TCA 90 bp GCTAGTGCTGCCACTGGCCAGGCACAGATACAGAAGGCCCTGAGGAGTTGGGAGGCACGAAACCCACGCTaGGTCCCACTGCCCCGGCCA +
Preference number: 4 (lower is better)
Translates to: ASAATGQAQIQKALRSWEARNPR*VPLPRP
Trigger: TGGCCGGGGCAGTGGGACTCAGCGTGGGTTTCGTGC...CTCCCAACTCCTCAGGGCCTTCTGTATCTGTGCCTGGCCAGTGGCAGCACTAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394048.10
CDS-3UTR GCA 90 bp GGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGCTAGCCCAGCACGCCAGTaGCCTCACCCCGAACCTGCA +
Preference number: 4 (lower is better)
Translates to: GLLGERAEGHRLCPWTLASPARQ*PHPEPA
Trigger: TGCAGGTTCGGGGTGAGGGCACTGGCGTGCTGGGCT...AGCTAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp AGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTAGGCTCATCACATTGAGGCGGGAGGGAGCAGAGGGCTaGTCCATGGGGCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: RAQALPLDPSFRLITLRREGAEG*SMGLGL
Trigger: CAGCCCCAGCCCCATGGACCAGCCCTCTGCTCCCTC...CCGCCTCAATGTGATGAGCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp ATGGAGCGAGACGAAGGCAGGAAGACAGAGCAGTCAGGCTGGGACTCGCCAGCTCCAGGGCCAGCAGGTTaGCCCCCAGAACCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: MERDEGRKTEQSGWDSPAPGPAG*PPEPGS
Trigger: AGACCCAGGTTCTGGGGGCCAACCTGCTGGCCCTGG...AGCTGGCGAGTCCCAGCCTGACTGCTCTGTCTTCCTGCCTTCGTCTCGCTCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp CCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGGCCCAGAGGCCCGGCTaGAGCCTCAAGGGGACTGTC +
Preference number: 4 (lower is better)
Translates to: PNMGLLGERAEGHRLCPWAQRPG*SLKGTV
Trigger: GACAGTCCCCTTGAGGCTCCAGCCGGGCCTCTGGGC...CCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp ATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGCCCAGAGGCCCGGCTaGAGCCTCAAGGGGACTGTC +
Preference number: 4 (lower is better)
Translates to: MGLLGERAEGHRLCPWTLAQRPG*SLKGTV
Trigger: GACAGTCCCCTTGAGGCTCCAGCCGGGCCTCTGGGC...TAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp CCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGCAACCGCCTCCCGAATaGAGTCAGCACCGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: PNMGLLGERAEGHRLCPWQPPPE*SQHRQG
Trigger: GCCCTGGCGGTGCTGACTTCATTCGGGAGGCGGTTG...CCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp ATGGAGCGAGACGAAGGCAGGAAGACAGAGCAGTCAGGCTGGGACTCGCCAGCTGCTGGGGCCCTCTCCTaGAGATCGCTCCATTGTGCC +
Preference number: 4 (lower is better)
Translates to: MERDEGRKTEQSGWDSPAAGALS*RSLHCA
Trigger: GGCACAATGGAGCGATCTCCAGGAGAGGGCCCCAGC...AGCTGGCGAGTCCCAGCCTGACTGCTCTGTCTTCCTGCCTTCGTCTCGCTCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp GGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTGTCCAGGATGAGTTCTaGGGCAGTCAGCAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: GPNMGLLGERAEGHRLCPVQDEF*GSQQAG
Trigger: GCCCGCCTGCTGACTGCCCCAGAACTCATCCTGGAC...AGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp ATGGAGCGAGACGAAGGCAGGAAGACAGAGCAGTCAGGCTGGGACTCGCCAGCTGTCCAGGATGAGTTCTaGGGCAGTCAGCAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: MERDEGRKTEQSGWDSPAVQDEF*GSQQAG
Trigger: GCCCGCCTGCTGACTGCCCCAGAACTCATCCTGGAC...AGCTGGCGAGTCCCAGCCTGACTGCTCTGTCTTCCTGCCTTCGTCTCGCTCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp GGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGCTGTGACAGGGTCGAGGTaGGGCATCCACACTGCTGCC +
Preference number: 4 (lower is better)
Translates to: GLLGERAEGHRLCPWTLAVTGSR*GIHTAA
Trigger: GGCAGCAGTGTGGATGCCCCACCTCGACCCTGTCAC...AGCTAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp GGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTAGGCTCACCACGTCTGGGAAGCTaGCCCAGGCAGGTAGCTCTC +
Preference number: 4 (lower is better)
Translates to: GERAEGHRLCPWTLALGSPRLGS*PRQVAL
Trigger: GAGAGCTACCTGCCTGGGTCAGCTTCCCAGACGTGG...TGAGCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp ATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTACCACGTCTGGGAAGCTaGCCCAGGCAGGTAGCTCTC +
Preference number: 4 (lower is better)
Translates to: MGLLGERAEGHRLCPWTLPRLGS*PRQVAL
Trigger: GAGAGCTACCTGCCTGGGTCAGCTTCCCAGACGTGG...TAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp GCTAGTGCTGCCACTGGCCAGGCACAGATACAGAAGGCCCTGAGGAGTTGGGAGGGGTCGGGCGTCGGATaGAGAACATTGACACAGCCC +
Preference number: 4 (lower is better)
Translates to: ASAATGQAQIQKALRSWEGSGVG*RTLTQP
Trigger: GGGCTGTGTCAATGTTCTTCATCCGACGCCCGACCC...CTCCCAACTCCTCAGGGCCTTCTGTATCTGTGCCTGGCCAGTGGCAGCACTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394048.10
CDS-3UTR TCA 90 bp ATGGAGCGAGACGAAGGCAGGAAGACAGAGCAGTCAGGCTGGGACTCGCCAGCTCTATCAGGAGTCGTGTaGCAGGGTCGAGGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: MERDEGRKTEQSGWDSPALSGVV*QGRGGA
Trigger: TGCCCCACCTCGACCCTGTCACACGACTCCTGATAG...AGCTGGCGAGTCCCAGCCTGACTGCTCTGTCTTCCTGCCTTCGTCTCGCTCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp GGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTCTATCAGGAGTCGTGTaGCAGGGTCGAGGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: GPNMGLLGERAEGHRLCPLSGVV*QGRGGA
Trigger: TGCCCCACCTCGACCCTGTCACACGACTCCTGATAG...AGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR GCA 90 bp TTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTAGGCAGCCCAGCACGCCAGTaGCCTCACCCCGAACCTGCA +
Preference number: 4 (lower is better)
Translates to: LGERAEGHRLCPWTLALGSPARQ*PHPEPA
Trigger: TGCAGGTTCGGGGTGAGGGCACTGGCGTGCTGGGCT...GCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR GCA 90 bp GGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTGCTTCCACTCCCGAGTaGTGGGACACCAGGATCCCT +
Preference number: 4 (lower is better)
Translates to: GPNMGLLGERAEGHRLCPASTPE*WDTRIP
Trigger: AGGGATCCTGGTGTCCCAGCACTCGGGAGTGGAAGC...AGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR GCA 90 bp GGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGCTACATGTGTTAGGCGCTaGCGGAGCTCTGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: GLLGERAEGHRLCPWTLATCVRR*RSSGAE
Trigger: CTCAGCCCCAGAGCTCCGGCAGCGCCTAACACATGT...AGCTAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp AGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTAGGCTCATCACATTGAGGCGGCCATTGTGCCACCTCTaGGAGGATCCGCCCGACCCA +
Preference number: 4 (lower is better)
Translates to: RAQALPLDPSFRLITLRRPLCHL*EDPPDP
Trigger: TGGGTCGGGCGGATCCTCCCAGAGGTGGCACAATGG...CCGCCTCAATGTGATGAGCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp GGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTAGGCTCAGTGCAGGCGGCCAGATaGGACATCCTCCAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: GERAEGHRLCPWTLALGSVQAAR*DILQGQ
Trigger: CTGACCCTGGAGGATGTCCCATCTGGCCGCCTGCAC...TGAGCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp ATGGAGCGAGACGAAGGCAGGAAGACAGAGCAGTCAGGCTGGGACTCGCCAGCTCAGTGGGGACAGAACTaGACATGGGGGCCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: MERDEGRKTEQSGWDSPAQWGQN*TWGPEL
Trigger: CAGCTCAGGCCCCCATGTCCAGTTCTGTCCCCACTG...AGCTGGCGAGTCCCAGCCTGACTGCTCTGTCTTCCTGCCTTCGTCTCGCTCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394048.10
CDS-3UTR TCA 90 bp GGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTGGACCAGAGCTGCTaGGCTGGAACCACTGGTCCA +
Preference number: 4 (lower is better)
Translates to: GLLGERAEGHRLCPWTLALDQSC*AGTTGP
Trigger: TGGACCAGTGGTTCCAGCTCAGCAGCTCTGGTCCAA...AGCTAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp GGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGCTGGTCCTCTTCTTCTGTaGGGTCCTCCTCTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: GLLGERAEGHRLCPWTLAGPLLL*GPPLGA
Trigger: GGCACCAAGAGGAGGACCTCACAGAAGAAGAGGACC...AGCTAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR GCA 90 bp ATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTATCGTCGTCCAGTAGCTaGCTCGCTGCTCGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: MGLLGERAEGHRLCPWTLSSSSS*LAARRL
Trigger: GAGCCTTCGAGCAGCGAGGCAGCTACTGGACGACGA...TAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR GCA 90 bp GCTAGTGCTGCCACTGGCCAGGCACAGATACAGAAGGCCCTGAGGAGTTGGGAGGTGGGGCATCCACACTaGTGCCTCTCTGGGGATTCT +
Preference number: 4 (lower is better)
Translates to: ASAATGQAQIQKALRSWEVGHPH*CLSGDS
Trigger: AGAATCCCCAGAGAGGCAGCAGTGTGGATGCCCCAC...CTCCCAACTCCTCAGGGCCTTCTGTATCTGTGCCTGGCCAGTGGCAGCACTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394048.10
CDS-3UTR GCA 90 bp CTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCGCTCCAGGCGCAAGTaGAGGCGGCCAGATGGGACA +
Preference number: 4 (lower is better)
Translates to: LWSGKGPNMGLLGERAEGRSRRK*RRPDGT
Trigger: TGTCCCATCTGGCCGCCTGCACTTGCGCCTGGAGCG...CCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR GCA 90 bp ATGGAGCGAGACGAAGGCAGGAAGACAGAGCAGTCAGGCTGGGACTCGCCAGCTCCCTCACCCCGAACCTaGAACTCTAGGCTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: MERDEGRKTEQSGWDSPAPSPRT*NSRLSV
Trigger: CACTGAGAGCCTAGAGTTGCAGGTTCGGGGTGAGGG...AGCTGGCGAGTCCCAGCCTGACTGCTCTGTCTTCCTGCCTTCGTCTCGCTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR GCA 90 bp CCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGGCTTCCACTCCCGAGTaGTGGGACACCAGGATCCCT +
Preference number: 4 (lower is better)
Translates to: PNMGLLGERAEGHRLCPWASTPE*WDTRIP
Trigger: AGGGATCCTGGTGTCCCAGCACTCGGGAGTGGAAGC...CCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp GGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTCCCGCTCCATATAGATaGATAGCAGGGCCGCAGCCA +
Preference number: 4 (lower is better)
Translates to: GPNMGLLGERAEGHRLCPPAPYR*IAGPQP
Trigger: TGGCTGCGGCCCTGCTATCCATCTATATGGAGCGGG...AGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp CCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGCGGTCCAAGCAGAGCTaGTCAGCCACGAGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: PNMGLLGERAEGHRLCPWRSKQS*SATRSS
Trigger: AGAGCTCCTCGTGGCTGACCAGCTCTGCTTGGACCG...CCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp GGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGCTCACCGGGCTACACCCTaGGAAAGGTCTGTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: GLLGERAEGHRLCPWTLAHRATP*ERSVSA
Trigger: AGCTGAGACAGACCTTTCCCAGGGTGTAGCCCGGTG...AGCTAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp CCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACAGAGCAGTCAGGCTaGGACTCGCCAGCTCCTAGG +
Preference number: 4 (lower is better)
Translates to: PNMGLLGERAEGHRLCPWTEQSG*DSPAPR
Trigger: CCTAGGAGCTGGCGAGTCCCAGCCTGACTGCTCTGT...CCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp GCTAGTGCTGCCACTGGCCAGGCACAGATACAGAAGGCCCTGAGGAGTTGGGAGGGACAGAACTGGACATaGGGGCCTGAGCTGCTGAAC +
Preference number: 4 (lower is better)
Translates to: ASAATGQAQIQKALRSWEGQNWT*GPELLN
Trigger: GTTCAGCAGCTCAGGCCCCCATGTCCAGTTCTGTCC...CTCCCAACTCCTCAGGGCCTTCTGTATCTGTGCCTGGCCAGTGGCAGCACTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394048.10
CDS-3UTR TCA 90 bp CCAGGGGCCCAGAAGGATAAAGGCCGTGCAGTAAAGGGAACATACGGTTCTTCTCAACCGCCTCCCGAATaGAGTCAGCACCGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: PGAQKDKGRAVKGTYGSSQPPPE*SQHRQG
Trigger: GCCCTGGCGGTGCTGACTTCATTCGGGAGGCGGTTG...AGAAGAACCGTATGTTCCCTTTACTGCACGGCCTTTATCCTTCTGGGCCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394048.10
CDS-3UTR TCA 90 bp TCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGCACGAAACCCACGCTaGGTCCCACTGCCCCGGCCA +
Preference number: 4 (lower is better)
Translates to: SLWSGKGPNMGLLGERAEARNPR*VPLPRP
Trigger: TGGCCGGGGCAGTGGGACTCAGCGTGGGTTTCGTGC...TTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp TTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTAGGCGGGTCGGGCGTCGGATaGAGAACATTGACACAGCCC +
Preference number: 4 (lower is better)
Translates to: LGERAEGHRLCPWTLALGGSGVG*RTLTQP
Trigger: GGGCTGTGTCAATGTTCTTCATCCGACGCCCGACCC...GCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp AGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTAGGCTCATCACATTGAGGCGGTTGGACCAGAGCTGCTaGGCTGGAACCACTGGTCCA +
Preference number: 4 (lower is better)
Translates to: RAQALPLDPSFRLITLRRLDQSC*AGTTGP
Trigger: TGGACCAGTGGTTCCAGCTCAGCAGCTCTGGTCCAA...CCGCCTCAATGTGATGAGCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp GGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGCTAGTAGCACCTGCCCCTaGCCACTGCTGAGTGTAAAC +
Preference number: 4 (lower is better)
Translates to: GLLGERAEGHRLCPWTLASSTCP*PLLSVN
Trigger: GTTTACACTCAGCAGTGGTCAGGGGCAGGTGCTACT...AGCTAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp ATGGAGCGAGACGAAGGCAGGAAGACAGAGCAGTCAGGCTGGGACTCGCCAGCTATCACATTGAGGCGGTaGTGGAGCGAGACGAAGGCA +
Preference number: 4 (lower is better)
Translates to: MERDEGRKTEQSGWDSPAITLRR*WSETKA
Trigger: TGCCTTCGTCTCGCTCCATCACCGCCTCAATGTGAT...AGCTGGCGAGTCCCAGCCTGACTGCTCTGTCTTCCTGCCTTCGTCTCGCTCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR GCA 90 bp CTGGAGAGGTTAGCCTGTCCACCTTCCCACCCATGTGTGGTAGGGAAGAAGGTGCACGCTGAGTCCCACTaGCCCGGCCAAATACACAGG +
Preference number: 4 (lower is better)
Translates to: LERLACPPSHPCVVGKKVHAESH*PGQIHR
Trigger: CCTGTGTATTTGGCCGGGGCAGTGGGACTCAGCGTG...CACCTTCTTCCCTACCACACATGGGTGGGAAGGTGGACAGGCTAACCTCTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394048.10
CDS-3UTR GCA 90 bp ATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGTGGGGCATCCACACTaGTGCCTCTCTGGGGATTCT +
Preference number: 4 (lower is better)
Translates to: MGLLGERAEGHRLCPWTLVGHPH*CLSGDS
Trigger: AGAATCCCCAGAGAGGCAGCAGTGTGGATGCCCCAC...TAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR GCA 90 bp ATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTACAGCGGGAGGTCCTCTaGCCGCTCCATATAGATGGA +
Preference number: 4 (lower is better)
Translates to: MGLLGERAEGHRLCPWTLQREVL*PLHIDG
Trigger: TCCATCTATATGGAGCGGGCAGAGGACCTCCCGCTG...TAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR GCA 90 bp CTGGAGAGGTTAGCCTGTCCACCTTCCCACCCATGTGTGGTAGGGAAGAAGGTGACATGTGTTAGGCGCTaGCGGAGCTCTGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: LERLACPPSHPCVVGKKVTCVRR*RSSGAE
Trigger: CTCAGCCCCAGAGCTCCGGCAGCGCCTAACACATGT...CACCTTCTTCCCTACCACACATGGGTGGGAAGGTGGACAGGCTAACCTCTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394048.10
CDS-3UTR GCA 90 bp CCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGTCAGCTAGGTCCAGCTaGACCTTCCCCAGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: PNMGLLGERAEGHRLCPWSARSS*TFPSSS
Trigger: TGAGCTGCTGGGGAAGGTGCAGCTGGACCTAGCTGA...CCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR GCA 90 bp ATGGAGCGAGACGAAGGCAGGAAGACAGAGCAGTCAGGCTGGGACTCGCCAGCTGAAGGGCACAGGCTCTaGCCTTGGACCCTAGCTTTA +
Preference number: 4 (lower is better)
Translates to: MERDEGRKTEQSGWDSPAEGHRL*PWTLAL
Trigger: TAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCTTC...AGCTGGCGAGTCCCAGCCTGACTGCTCTGTCTTCCTGCCTTCGTCTCGCTCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp CTGGAGAGGTTAGCCTGTCCACCTTCCCACCCATGTGTGGTAGGGAAGAAGGTGTTGGCCCCCAGAACCTaGGTCTGGCTTTGCGTGAGC +
Preference number: 4 (lower is better)
Translates to: LERLACPPSHPCVVGKKVLAPRT*VWLCVS
Trigger: GCTCACGCAAAGCCAGACCCAGGTTCTGGGGGCCAA...CACCTTCTTCCCTACCACACATGGGTGGGAAGGTGGACAGGCTAACCTCTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394048.10
CDS-3UTR CCA 90 bp AGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTAGGCTCATCACATTGAGGCGGAGCCTTTTCCACGTCTaGGAAGCTGACCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: RAQALPLDPSFRLITLRRSLFHV*EADPGR
Trigger: CCTGCCTGGGTCAGCTTCCCAGACGTGGAAAAGGCT...CCGCCTCAATGTGATGAGCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp GCTAGTGCTGCCACTGGCCAGGCACAGATACAGAAGGCCCTGAGGAGTTGGGAGCTGAGCTGGAACCACTaGTCCAGGATGAGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: ASAATGQAQIQKALRSWELSWNH*SRMSSG
Trigger: CCCAGAACTCATCCTGGACCAGTGGTTCCAGCTCAG...CTCCCAACTCCTCAGGGCCTTCTGTATCTGTGCCTGGCCAGTGGCAGCACTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394048.10
CDS-3UTR CCA 90 bp AGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTAGGCTCATCACATTGAGGCGGCCAGAGCTGCTGAGCTaGAACCACTGGTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: RAQALPLDPSFRLITLRRPELLS*NHWSRM
Trigger: CATCCTGGACCAGTGGTTCCAGCTCAGCAGCTCTGG...CCGCCTCAATGTGATGAGCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp AGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTAGGCTCATCACATTGAGGCGGTCCAGCTTTCGTCTCTaGGCCTCATCCAGGGGGAGT +
Preference number: 4 (lower is better)
Translates to: RAQALPLDPSFRLITLRRSSFRL*ASSRGS
Trigger: ACTCCCCCTGGATGAGGCCCAGAGACGAAAGCTGGA...CCGCCTCAATGTGATGAGCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp AGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTAGGCTCATCACATTGAGGCGGTCGGATGAAGAACATTaGCACAGCCCCCACGAAGGG +
Preference number: 4 (lower is better)
Translates to: RAQALPLDPSFRLITLRRSDEEH*HSPHEG
Trigger: CCCTTCGTGGGGGCTGTGTCAATGTTCTTCATCCGA...CCGCCTCAATGTGATGAGCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp ATGGAGCGAGACGAAGGCAGGAAGACAGAGCAGTCAGGCTGGGACTCGCCAGCTAAGTGCATATGGGTCTaGCTTGCCCTCAATCAGGCC +
Preference number: 4 (lower is better)
Translates to: MERDEGRKTEQSGWDSPAKCIWV*LALNQA
Trigger: GGCCTGATTGAGGGCAAGTCAGACCCATATGCACTT...AGCTGGCGAGTCCCAGCCTGACTGCTCTGTCTTCCTGCCTTCGTCTCGCTCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp GCTAGTGCTGCCACTGGCCAGGCACAGATACAGAAGGCCCTGAGGAGTTGGGAGCATTCTAGCCTCAAGTaGACTTGGCCTTGCCCACCT +
Preference number: 4 (lower is better)
Translates to: ASAATGQAQIQKALRSWEHSSLK*TWPCPP
Trigger: AGGTGGGCAAGGCCAAGTTCACTTGAGGCTAGAATG...CTCCCAACTCCTCAGGGCCTTCTGTATCTGTGCCTGGCCAGTGGCAGCACTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394048.10
CDS-3UTR TCA 90 bp CTGGAGAGGTTAGCCTGTCCACCTTCCCACCCATGTGTGGTAGGGAAGAAGGTGACCACTGGTCCAGGATaGGTTCTGGGGCAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: LERLACPPSHPCVVGKKVTTGPG*VLGQSA
Trigger: TGCTGACTGCCCCAGAACTCATCCTGGACCAGTGGT...CACCTTCTTCCCTACCACACATGGGTGGGAAGGTGGACAGGCTAACCTCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394048.10
CDS-3UTR TCA 90 bp GGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTTTGACATAGGGGTCTaGCTTGCCCTTCACCAGTCC +
Preference number: 4 (lower is better)
Translates to: GPNMGLLGERAEGHRLCPFDIGV*LALHQS
Trigger: GGACTGGTGAAGGGCAAGTCAGACCCCTATGTCAAA...AGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp ATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAAGTAGCACCTGCCCCTaGCCACTGCTGAGTGTAAAC +
Preference number: 4 (lower is better)
Translates to: MGLLGERAEGHRLCPWTLSSTCP*PLLSVN
Trigger: GTTTACACTCAGCAGTGGTCAGGGGCAGGTGCTACT...TAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp GGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTTCTTCACTCAGCGATaGGGAGCTGTGGCTGTAGCT +
Preference number: 4 (lower is better)
Translates to: GPNMGLLGERAEGHRLCPFFTQR*GAVAVA
Trigger: AGCTACAGCCACAGCTCCTCATCGCTGAGTGAAGAA...AGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp GGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTAGGCTCAATCACATTGAGGCGGTaGTGGAGCGAGACGAAGGCA +
Preference number: 4 (lower is better)
Translates to: GERAEGHRLCPWTLALGSITLRR*WSETKA
Trigger: TGCCTTCGTCTCGCTCCATCACCGCCTCAATGTGAT...TGAGCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp CCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGAGATACAGAAGGCCCTaGGGAGTTGGGAGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: PNMGLLGERAEGHRLCPWRYRRP*GVGRKG
Trigger: TCCCTTCCTCCCAACTCCTCAGGGCCTTCTGTATCT...CCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394048.10
CDS-3UTR GCA 90 bp TTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTAGGCGAGATCGCTCCATTGTaGCACCTCTGGGAGGATCCG +
Preference number: 4 (lower is better)
Translates to: LGERAEGHRLCPWTLALGEIAPL*HLWEDP
Trigger: CGGATCCTCCCAGAGGTGGCACAATGGAGCGATCTC...GCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR GCA 90 bp AGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTAGGCTCATCACATTGAGGCGGGTTTTCGCAGTGAGCTaGTCCTCGTCGTCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: RAQALPLDPSFRLITLRRVFAVS*SSSSSS
Trigger: GCTACTGGACGACGAGGAGCAGCTCACTGCGAAAAC...CCGCCTCAATGTGATGAGCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR GCA 90 bp CCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGAGGTCCTCCTCTTGGTaGCTCGGTTCTTGTCTGGCA +
Preference number: 4 (lower is better)
Translates to: PNMGLLGERAEGHRLCPWRSSSW*LGSCLA
Trigger: TGCCAGACAAGAACCGAGGCACCAAGAGGAGGACCT...CCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR GCA 90 bp GGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTAGGCTCAAGGTCCTCCTCTTGGTaGCTCGGTTCTTGTCTGGCA +
Preference number: 4 (lower is better)
Translates to: GERAEGHRLCPWTLALGSRSSSW*LGSCLA
Trigger: TGCCAGACAAGAACCGAGGCACCAAGAGGAGGACCT...TGAGCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR GCA 90 bp AGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTAGGCTCATCACATTGAGGCGGCCAGCTCCTAGGAGCTaGCCTTGTCCTTGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: RAQALPLDPSFRLITLRRPAPRS*PCPCCP
Trigger: TGGACAACAAGGACAAGGGCAGCTCCTAGGAGCTGG...CCGCCTCAATGTGATGAGCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR GCA 90 bp ATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGAAGGGCACAGGCTCTaGCCTTGGACCCTAGCTTTA +
Preference number: 4 (lower is better)
Translates to: MGLLGERAEGHRLCPWTLEGHRL*PWTLAL
Trigger: TAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCTTC...TAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp GGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGCTAGGAAGGGCCAGACCTaGGCCACAATCTTATTGAGC +
Preference number: 4 (lower is better)
Translates to: GLLGERAEGHRLCPWTLARKGQT*ATILLS
Trigger: GCTCAATAAGATTGTGGCCCAGGTCTGGCCCTTCCT...AGCTAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp AGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTAGGCTCATCACATTGAGGCGGAGCTTCTCCATATACTaGCCCAGGAAGGGCCAGACC +
Preference number: 4 (lower is better)
Translates to: RAQALPLDPSFRLITLRRSFSIY*PRKGQT
Trigger: GGTCTGGCCCTTCCTGGGCCAGTATATGGAGAAGCT...CCGCCTCAATGTGATGAGCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp GGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGCTAAGGTCCCCAATGAGTaGCTCCAGTATCACCCGCAA +
Preference number: 4 (lower is better)
Translates to: GLLGERAEGHRLCPWTLAKVPNE*LQYHPQ
Trigger: TTGCGGGTGATACTGGAGCCACTCATTGGGGACCTT...AGCTAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp CCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGCGCTTCCTCCCACACTaGGCAGTTGGTACTGTAGAC +
Preference number: 4 (lower is better)
Translates to: PNMGLLGERAEGHRLCPWRFLPH*AVGTVD
Trigger: GTCTACAGTACCAACTGCCCAGTGTGGGAGGAAGCG...CCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp CCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACACTGCTGCCTCTCTaGGGATTCTCACTGTCCACG +
Preference number: 4 (lower is better)
Translates to: PNMGLLGERAEGHRLCPWTLLPL*GFSLST
Trigger: CGTGGACAGTGAGAATCCCCAGAGAGGCAGCAGTGT...CCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp ATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAACACTGCTGCCTCTCTaGGGATTCTCACTGTCCACG +
Preference number: 4 (lower is better)
Translates to: MGLLGERAEGHRLCPWTLTLLPL*GFSLST
Trigger: CGTGGACAGTGAGAATCCCCAGAGAGGCAGCAGTGT...TAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp GGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTCCAAGAAACGGTCTTTaGCAATCAGGTCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: GPNMGLLGERAEGHRLCPPRNGL*QSGPGP
Trigger: AGGCCCAGGACCTGATTGCCAAAGACCGTTTCTTGG...AGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp TTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTAGGCCCCGCTCCATATAGATaGATAGCAGGGCCGCAGCCA +
Preference number: 4 (lower is better)
Translates to: LGERAEGHRLCPWTLALGPAPYR*IAGPQP
Trigger: TGGCTGCGGCCCTGCTATCCATCTATATGGAGCGGG...GCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp CTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCGGTCCAAGCAGAGCTaGTCAGCCACGAGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: LWSGKGPNMGLLGERAEGRSKQS*SATRSS
Trigger: AGAGCTCCTCGTGGCTGACCAGCTCTGCTTGGACCG...CCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp CAGTGGGGACAGAACTGGACATGGGGGCCTGAGCTGCTGAACATTTGCTACATGTCCACTCCCGAGTGCTaGGACACCAGGATCCCTAGC +
Preference number: 4 (lower is better)
Translates to: QWGQNWTWGPELLNICYMSTPEC*DTRIPS
Trigger: GCTAGGGATCCTGGTGTCCCAGCACTCGGGAGTGGA...CATGTAGCAAATGTTCAGCAGCTCAGGCCCCCATGTCCAGTTCTGTCCCCACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394048.10
CDS-3UTR CCA 90 bp GGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTAGGCTCAGTGAGGTCCTCCTCTTaGTGCCTCGGTTCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: GERAEGHRLCPWTLALGSVRSSS*CLGSCL
Trigger: CAGACAAGAACCGAGGCACCAAGAGGAGGACCTCAC...TGAGCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp CTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGTCATCCCTGTCCAGTTaGTGTCTAGGGTCGGGCGTC +
Preference number: 4 (lower is better)
Translates to: LWSGKGPNMGLLGERAEGSSLSS*CLGSGV
Trigger: GACGCCCGACCCTAGACATCAACTGGACAGGGATGA...CCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp GGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTCATGGTGTCAGAGAGTaGGCTAAGTCCTGGGATATC +
Preference number: 4 (lower is better)
Translates to: GPNMGLLGERAEGHRLCPHGVRE*AKSWDI
Trigger: GATATCCCAGGACTTAGCTCACTCTCTGACACCATG...AGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp GGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGCTCAGCAATGGAGTCCATaGTCATGGTGTCAGAGAGTG +
Preference number: 4 (lower is better)
Translates to: GLLGERAEGHRLCPWTLAQQWSP*SWCQRV
Trigger: CACTCTCTGACACCATGATCATGGACTCCATTGCTG...AGCTAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp CTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGACCACTGGTCCAGGATaGGTTCTGGGGCAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: LWSGKGPNMGLLGERAEGTTGPG*VLGQSA
Trigger: TGCTGACTGCCCCAGAACTCATCCTGGACCAGTGGT...CCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp AGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTAGGCTCATCACATTGAGGCGGTTTGACATAGGGGTCTaGCTTGCCCTTCACCAGTCC +
Preference number: 4 (lower is better)
Translates to: RAQALPLDPSFRLITLRRFDIGV*LALHQS
Trigger: GGACTGGTGAAGGGCAAGTCAGACCCCTATGTCAAA...CCGCCTCAATGTGATGAGCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp GGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTCTCTTGGCCTGGAACTaGTGTGACGATCACCTCAAA +
Preference number: 4 (lower is better)
Translates to: GPNMGLLGERAEGHRLCPLLAWN*CDDHLK
Trigger: TTTGAGGTGATCGTCACATCAGTTCCAGGCCAAGAG...AGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp TGGGGACAGAACTGGACATGGGGGCCTGAGCTGCTGAACATTTGCTACATGCAGGGTCCTCTTCTTCTGTaGGGTCCTCCTCTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: WGQNWTWGPELLNICYMQGPLLL*GPPLGA
Trigger: GGCACCAAGAGGAGGACCTCACAGAAGAAGAGGACC...CTGCATGTAGCAAATGTTCAGCAGCTCAGGCCCCCATGTCCAGTTCTGTCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394048.10
CDS-3UTR TCA 90 bp CTGGAGAGGTTAGCCTGTCCACCTTCCCACCCATGTGTGGTAGGGAAGAAGGTGCTGGACATGGGGGCCTaGGCTGCTGAACATTTGCTA +
Preference number: 4 (lower is better)
Translates to: LERLACPPSHPCVVGKKVLDMGA*AAEHLL
Trigger: TAGCAAATGTTCAGCAGCTCAGGCCCCCATGTCCAG...CACCTTCTTCCCTACCACACATGGGTGGGAAGGTGGACAGGCTAACCTCTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394048.10
CDS-3UTR GCA 90 bp CTGGAGAGGTTAGCCTGTCCACCTTCCCACCCATGTGTGGTAGGGAAGAAGGTGGTTTTCGCAGTGAGCTaGTCCTCGTCGTCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: LERLACPPSHPCVVGKKVVFAVS*SSSSSS
Trigger: GCTACTGGACGACGAGGAGCAGCTCACTGCGAAAAC...CACCTTCTTCCCTACCACACATGGGTGGGAAGGTGGACAGGCTAACCTCTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394048.10
CDS-3UTR GCA 90 bp AACATACGGTTCTTCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGCGCTCCAGGCGCAAGTaGAGGCGGCCAGATGGGACA +
Preference number: 4 (lower is better)
Translates to: NIRFFSLVRQRPEYGPVRRSRRK*RRPDGT
Trigger: TGTCCCATCTGGCCGCCTGCACTTGCGCCTGGAGCG...CCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGAAGAACCGTATGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp GGTTCTTCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGCCATTGTGCCACCTCTaGGAGGATCCGCCCGACCCA +
Preference number: 4 (lower is better)
Translates to: GSSLWSGKGPNMGLLGERPLCHL*EDPPDP
Trigger: TGGGTCGGGCGGATCCTCCCAGAGGTGGCACAATGG...CCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGAAGAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp GGTTCTTCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGGGGCCCTCTCCTaGAGATCGCTCCATTGTGCC +
Preference number: 4 (lower is better)
Translates to: GSSLWSGKGPNMGLLGERAGALS*RSLHCA
Trigger: GGCACAATGGAGCGATCTCCAGGAGAGGGCCCCAGC...CCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGAAGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp AACATACGGTTCTTCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGCCAGGGCCAGCAGGTTaGCCCCCAGAACCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: NIRFFSLVRQRPEYGPVRPGPAG*PPEPGS
Trigger: AGACCCAGGTTCTGGGGGCCAACCTGCTGGCCCTGG...CCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGAAGAACCGTATGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp CTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGAGCCTTTTCCACGTCTaGGAAGCTGACCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LWSGKGPNMGLLGERAEGSLFHV*EADPGR
Trigger: CCTGCCTGGGTCAGCTTCCCAGACGTGGAAAAGGCT...CCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp AGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTAGGCTCATCACATTGAGGCGGAGGAAGGGCCAGACCTaGGCCACAATCTTATTGAGC +
Preference number: 4 (lower is better)
Translates to: RAQALPLDPSFRLITLRRRKGQT*ATILLS
Trigger: GCTCAATAAGATTGTGGCCCAGGTCTGGCCCTTCCT...CCGCCTCAATGTGATGAGCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp ATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAAAGGTCCCCAATGAGTaGCTCCAGTATCACCCGCAA +
Preference number: 4 (lower is better)
Translates to: MGLLGERAEGHRLCPWTLKVPNE*LQYHPQ
Trigger: TTGCGGGTGATACTGGAGCCACTCATTGGGGACCTT...TAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp TTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTAGGCGCACCAGTAATCGGTTaGGCAACACGAGGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: LGERAEGHRLCPWTLALGAPVIG*ATRGRQ
Trigger: CTGCCTTCCTCGTGTTGCCCAACCGATTACTGGTGC...GCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp GGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGCTCGACTGCAGAATGTCTaGGTACCCAAACGCACAAGT +
Preference number: 4 (lower is better)
Translates to: GLLGERAEGHRLCPWTLARLQNV*VPKRTS
Trigger: ACTTGTGCGTTTGGGTACCCAGACATTCTGCAGTCG...AGCTAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp CCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGTTCAATCTCCTGCCCTaGGACCTCGTGTACCATCAC +
Preference number: 4 (lower is better)
Translates to: PNMGLLGERAEGHRLCPWFNLLP*DLVYHH
Trigger: GTGATGGTACACGAGGTCCCAGGGCAGGAGATTGAA...CCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp ATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGGTAGACAACTAAGATaGCAGCTGACGGGGGATCTG +
Preference number: 4 (lower is better)
Translates to: MGLLGERAEGHRLCPWTLGRQLR*QLTGDL
Trigger: CAGATCCCCCGTCAGCTGCCATCTTAGTTGTCTACC...TAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp GCTAGTGCTGCCACTGGCCAGGCACAGATACAGAAGGCCCTGAGGAGTTGGGAGATAGAGTCTGGAGTTTaGACCAGAGCTGCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: ASAATGQAQIQKALRSWEIESGV*TRAAEL
Trigger: CAGCTCAGCAGCTCTGGTCCAAACTCCAGACTCTAT...CTCCCAACTCCTCAGGGCCTTCTGTATCTGTGCCTGGCCAGTGGCAGCACTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394048.10
CDS-3UTR CCA 90 bp GGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTGACAACCAGGCACCGTaGGGAAGCATATTTCTGATG +
Preference number: 4 (lower is better)
Translates to: GPNMGLLGERAEGHRLCPDNQAP*GSIFLM
Trigger: CATCAGAAATATGCTTCCCCACGGTGCCTGGTTGTC...AGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp TCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGTGACAGGGTCGAGGTaGGGCATCCACACTGCTGCC +
Preference number: 4 (lower is better)
Translates to: SLWSGKGPNMGLLGERAEVTGSR*GIHTAA
Trigger: GGCAGCAGTGTGGATGCCCCACCTCGACCCTGTCAC...TTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp ATGGAGCGAGACGAAGGCAGGAAGACAGAGCAGTCAGGCTGGGACTCGCCAGCTTCAACCTCTAGCTCTTaGCCTGGAACTGATGTGACG +
Preference number: 4 (lower is better)
Translates to: MERDEGRKTEQSGWDSPASTSSS*PGTDVT
Trigger: CGTCACATCAGTTCCAGGCCAAGAGCTAGAGGTTGA...AGCTGGCGAGTCCCAGCCTGACTGCTCTGTCTTCCTGCCTTCGTCTCGCTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp TCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGTGCAGGCGGCCAGATaGGACATCCTCCAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: SLWSGKGPNMGLLGERAEVQAAR*DILQGQ
Trigger: CTGACCCTGGAGGATGTCCCATCTGGCCGCCTGCAC...TTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp CTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGAGAGAGTTTTCGCAGTaGGCTGCTCCTCGTCGTCCA +
Preference number: 4 (lower is better)
Translates to: LWSGKGPNMGLLGERAEGREFSQ*AAPRRP
Trigger: TGGACGACGAGGAGCAGCTCACTGCGAAAACTCTCT...CCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp GGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTGGGCCACAATCTTATTaGGCCATTCAGCCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: GPNMGLLGERAEGHRLCPGPQSY*AIQPFP
Trigger: TGGAAAAGGCTGAATGGCTCAATAAGATTGTGGCCC...AGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp GGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTGTAGCTGCATGCCCTTaGCTCCTGCTTTGCAAAAAT +
Preference number: 4 (lower is better)
Translates to: GPNMGLLGERAEGHRLCPVAACP*LLLCKN
Trigger: ATTTTTGCAAAGCAGGAGTCAAGGGCATGCAGCTAC...AGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp CCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGCATGGTGTCAGAGAGTaGGCTAAGTCCTGGGATATC +
Preference number: 4 (lower is better)
Translates to: PNMGLLGERAEGHRLCPWHGVRE*AKSWDI
Trigger: GATATCCCAGGACTTAGCTCACTCTCTGACACCATG...CCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp AGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTAGGCTCATCACATTGAGGCGGCAGCAATGGAGTCCATaGTCATGGTGTCAGAGAGTG +
Preference number: 4 (lower is better)
Translates to: RAQALPLDPSFRLITLRRQQWSP*SWCQRV
Trigger: CACTCTCTGACACCATGATCATGGACTCCATTGCTG...CCGCCTCAATGTGATGAGCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp CTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCGAGCAGCCAGCAGGTaGATTCGAATAATGCCCCTG +
Preference number: 4 (lower is better)
Translates to: LWSGKGPNMGLLGERAEGRAASR*IRIMPL
Trigger: CAGGGGCATTATTCGAATTCACCTGCTGGCTGCTCG...CCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp GGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGCTCTGCCAACTTTAGTTTaGCATAGGGGTCTGACTTGC +
Preference number: 4 (lower is better)
Translates to: GLLGERAEGHRLCPWTLALPTLV*HRGLTC
Trigger: GCAAGTCAGACCCCTATGTCAAACTAAAGTTGGCAG...AGCTAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp GCTAGTGCTGCCACTGGCCAGGCACAGATACAGAAGGCCCTGAGGAGTTGGGAGCTGCCAACTTTAGTTTaGCATAGGGGTCTGACTTGC +
Preference number: 4 (lower is better)
Translates to: ASAATGQAQIQKALRSWELPTLV*HRGLTC
Trigger: GCAAGTCAGACCCCTATGTCAAACTAAAGTTGGCAG...CTCCCAACTCCTCAGGGCCTTCTGTATCTGTGCCTGGCCAGTGGCAGCACTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394048.10
CDS-3UTR TCA 90 bp CCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGGGCCTGGAACTGATGTaGCGATCACCTCAAAAACCT +
Preference number: 4 (lower is better)
Translates to: PNMGLLGERAEGHRLCPWGLELM*RSPQKP
Trigger: AGGTTTTTGAGGTGATCGTCACATCAGTTCCAGGCC...CCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp AGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTAGGCTCATCACATTGAGGCGGCTCTTGGCCTGGAACTaGTGTGACGATCACCTCAAA +
Preference number: 4 (lower is better)
Translates to: RAQALPLDPSFRLITLRRLLAWN*CDDHLK
Trigger: TTTGAGGTGATCGTCACATCAGTTCCAGGCCAAGAG...CCGCCTCAATGTGATGAGCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp TTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTAGGCTTCTTCACTCAGCGATaGGGAGCTGTGGCTGTAGCT +
Preference number: 4 (lower is better)
Translates to: LGERAEGHRLCPWTLALGFFTQR*GAVAVA
Trigger: AGCTACAGCCACAGCTCCTCATCGCTGAGTGAAGAA...GCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp GGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTCAGCTCACGCTCTCTTaGCATGAAGGAGGAATTAGA +
Preference number: 4 (lower is better)
Translates to: GPNMGLLGERAEGHRLCPQLTLS*HEGGIR
Trigger: TCTAATTCCTCCTTCATGTCAAGAGAGCGTGAGCTG...AGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR GCA 90 bp TCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAACACGCTGAGTCCCACTaGCCCGGCCAAATACACAGG +
Preference number: 4 (lower is better)
Translates to: SLWSGKGPNMGLLGERAEHAESH*PGQIHR
Trigger: CCTGTGTATTTGGCCGGGGCAGTGGGACTCAGCGTG...TTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR GCA 90 bp GCTAGTGCTGCCACTGGCCAGGCACAGATACAGAAGGCCCTGAGGAGTTGGGAGGAATCATCCTTCACTTaGACATCGAGCTCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: ASAATGQAQIQKALRSWEESSFT*TSSSWL
Trigger: AAGCCAGGAGCTCGATGTGCAAGTGAAGGATGATTC...CTCCCAACTCCTCAGGGCCTTCTGTATCTGTGCCTGGCCAGTGGCAGCACTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394048.10
CDS-3UTR GCA 90 bp CCAGGGGCCCAGAAGGATAAAGGCCGTGCAGTAAAGGGAACATACGGTTCTTCTTCAGCTAGGTCCAGCTaGACCTTCCCCAGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: PGAQKDKGRAVKGTYGSSSARSS*TFPSSS
Trigger: TGAGCTGCTGGGGAAGGTGCAGCTGGACCTAGCTGA...AGAAGAACCGTATGTTCCCTTTACTGCACGGCCTTTATCCTTCTGGGCCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394048.10
CDS-3UTR GCA 90 bp GGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGCTGAAGGGAGAACAATGTaGAGGCAAAGCAGGAAACAG +
Preference number: 4 (lower is better)
Translates to: GLLGERAEGHRLCPWTLAEGRTM*RQSRKQ
Trigger: CTGTTTCCTGCTTTGCCTGCACATTGTTCTCCCTTC...AGCTAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394048.10
CDS-3UTR CCA 90 bp CAGTGGGGACAGAACTGGACATGGGGGCCTGAGCTGCTGAACATTTGCTACATGAGCTTCTCCATATACTaGCCCAGGAAGGGCCAGACC +
Preference number: 4 (lower is better)
Translates to: QWGQNWTWGPELLNICYMSFSIY*PRKGQT
Trigger: GGTCTGGCCCTTCCTGGGCCAGTATATGGAGAAGCT...CATGTAGCAAATGTTCAGCAGCTCAGGCCCCCATGTCCAGTTCTGTCCCCACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394048.10
CDS-3UTR CCA 90 bp AGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTAGGCTCATCACATTGAGGCGGCCCCTTCTTCAGCTGTaGTGGGTACAATTCAGAGGT +
Preference number: 4 (lower is better)
Translates to: RAQALPLDPSFRLITLRRPLLQL*WVQFRG
Trigger: ACCTCTGAATTGTACCCACCACAGCTGAAGAAGGGG...CCGCCTCAATGTGATGAGCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000267113.4
CDS-3UTR CCA 90 bp GGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGCTCTAAAGTCAGGGCCCTaGAATCATCCTTCACTTGCA +
Preference number: 4 (lower is better)
Translates to: GLLGERAEGHRLCPWTLALKSGP*NHPSLA
Trigger: TGCAAGTGAAGGATGATTCCAGGGCCCTGACTTTAG...AGCTAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp GGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTTGGCAATCAGGTCCTaGGCCTCTAATACATGGATC +
Preference number: 4 (lower is better)
Translates to: GPNMGLLGERAEGHRLCPLAIRS*ASNTWI
Trigger: GATCCATGTATTAGAGGCCCAGGACCTGATTGCCAA...AGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp TTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTAGGCCCAAGAAACGGTCTTTaGCAATCAGGTCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: LGERAEGHRLCPWTLALGPRNGL*QSGPGP
Trigger: AGGCCCAGGACCTGATTGCCAAAGACCGTTTCTTGG...GCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp GGTTCTTCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGTCCACTCCCGAGTGCTaGGACACCAGGATCCCTAGC +
Preference number: 4 (lower is better)
Translates to: GSSLWSGKGPNMGLLGERSTPEC*DTRIPS
Trigger: GCTAGGGATCCTGGTGTCCCAGCACTCGGGAGTGGA...CCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGAAGAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp TCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAACAGAGCAGTCAGGCTaGGACTCGCCAGCTCCTAGG +
Preference number: 4 (lower is better)
Translates to: SLWSGKGPNMGLLGERAETEQSG*DSPAPR
Trigger: CCTAGGAGCTGGCGAGTCCCAGCCTGACTGCTCTGT...TTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp GGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTAGGCTCACATCACCTACATAGCTaGTGTTCAAGTCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: GERAEGHRLCPWTLALGSHHLHS*CSSPAG
Trigger: TCCTGCTGGACTTGAACATCAGCTATGTAGGTGATG...TGAGCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp CTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCATTCTAGCCTCAAGTaGACTTGGCCTTGCCCACCT +
Preference number: 4 (lower is better)
Translates to: LWSGKGPNMGLLGERAEGHSSLK*TWPCPP
Trigger: AGGTGGGCAAGGCCAAGTTCACTTGAGGCTAGAATG...CCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp AGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTAGGCTCATCACATTGAGGCGGTGTTTAAGACTGTGGTaGGACGCACTTTACACCTGC +
Preference number: 4 (lower is better)
Translates to: RAQALPLDPSFRLITLRRCLRLW*DALYTC
Trigger: GCAGGTGTAAAGTGCGTCTCACCACAGTCTTAAACA...CCGCCTCAATGTGATGAGCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp CTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGAGGGACCGGCAACCATaGACAATGCTGACCAGCTTT +
Preference number: 4 (lower is better)
Translates to: LWSGKGPNMGLLGERAEGRDRQP*TMLTSF
Trigger: AAAGCTGGTCAGCATTGTTCATGGTTGCCGGTCCCT...CCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR GCA 90 bp AACATACGGTTCTTCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTCGTCGTCCAGTAGCTaGCTCGCTGCTCGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: NIRFFSLVRQRPEYGPVRSSSSS*LAARRL
Trigger: GAGCCTTCGAGCAGCGAGGCAGCTACTGGACGACGA...CCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGAAGAACCGTATGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR GCA 90 bp AGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTAGGCTCATCACATTGAGGCGGGAATCATCCTTCACTTaGACATCGAGCTCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: RAQALPLDPSFRLITLRRESSFT*TSSSWL
Trigger: AAGCCAGGAGCTCGATGTGCAAGTGAAGGATGATTC...CCGCCTCAATGTGATGAGCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR GCA 90 bp GGTTCTTCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGCAGCGGGAGGTCCTCTaGCCGCTCCATATAGATGGA +
Preference number: 4 (lower is better)
Translates to: GSSLWSGKGPNMGLLGERQREVL*PLHIDG
Trigger: TCCATCTATATGGAGCGGGCAGAGGACCTCCCGCTG...CCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGAAGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR GCA 90 bp GGTTCTTCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGCCCTCACCCCGAACCTaGAACTCTAGGCTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: GSSLWSGKGPNMGLLGERPSPRT*NSRLSV
Trigger: CACTGAGAGCCTAGAGTTGCAGGTTCGGGGTGAGGG...CCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGAAGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp AACATACGGTTCTTCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTTGGCCCCCAGAACCTaGGTCTGGCTTTGCGTGAGC +
Preference number: 4 (lower is better)
Translates to: NIRFFSLVRQRPEYGPVRLAPRT*VWLCVS
Trigger: GCTCACGCAAAGCCAGACCCAGGTTCTGGGGGCCAA...CCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGAAGAACCGTATGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp ATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTATCCAATGATGCGCAATaGCTTTTCACCCAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: MGLLGERAEGHRLCPWTLSNDAQ*LFTQFH
Trigger: GTGGAACTGGGTGAAAAGCCATTGCGCATCATTGGA...TAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp ATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTATCACATATTTGTCCTTaGAACTCAGCCCTCGAGCAG +
Preference number: 4 (lower is better)
Translates to: MGLLGERAEGHRLCPWTLSHICP*NSALEQ
Trigger: CTGCTCGAGGGCTGAGTTCCAAGGACAAATATGTGA...TAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp GGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGCTAGTCTCTCCCCACTGTaGGTTGAGTTCTTCATCAAT +
Preference number: 4 (lower is better)
Translates to: GLLGERAEGHRLCPWTLASLSPL*VEFFIN
Trigger: ATTGATGAAGAACTCAACCCACAGTGGGGAGAGACT...AGCTAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp CTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGTTCAATCTCCTGCCCTaGGACCTCGTGTACCATCAC +
Preference number: 4 (lower is better)
Translates to: LWSGKGPNMGLLGERAEGFNLLP*DLVYHH
Trigger: GTGATGGTACACGAGGTCCCAGGGCAGGAGATTGAA...CCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp ATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTACTAAAGTCAGGGCCCTaGAATCATCCTTCACTTGCA +
Preference number: 4 (lower is better)
Translates to: MGLLGERAEGHRLCPWTLLKSGP*NHPSLA
Trigger: TGCAAGTGAAGGATGATTCCAGGGCCCTGACTTTAG...TAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp TCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAACCAGAGCTGCTGAGCTaGAACCACTGGTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: SLWSGKGPNMGLLGERAEPELLS*NHWSRM
Trigger: CATCCTGGACCAGTGGTTCCAGCTCAGCAGCTCTGG...TTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp TTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTAGGCATAGAGTCTGGAGTTTaGACCAGAGCTGCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: LGERAEGHRLCPWTLALGIESGV*TRAAEL
Trigger: CAGCTCAGCAGCTCTGGTCCAAACTCCAGACTCTAT...GCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp TGGGGACAGAACTGGACATGGGGGCCTGAGCTGCTGAACATTTGCTACATGCAGTCTTCCCGAACAACATaGCTCCGGAAGCTTCGTCCT +
Preference number: 4 (lower is better)
Translates to: WGQNWTWGPELLNICYMQSSRTT*LRKLRP
Trigger: AGGACGAAGCTTCCGGAGCCATGTTGTTCGGGAAGA...CTGCATGTAGCAAATGTTCAGCAGCTCAGGCCCCCATGTCCAGTTCTGTCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394048.10
CDS-3UTR CCA 90 bp CCAGGGGCCCAGAAGGATAAAGGCCGTGCAGTAAAGGGAACATACGGTTCTTCTGTGAGGTCCTCCTCTTaGTGCCTCGGTTCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: PGAQKDKGRAVKGTYGSSVRSSS*CLGSCL
Trigger: CAGACAAGAACCGAGGCACCAAGAGGAGGACCTCAC...AGAAGAACCGTATGTTCCCTTTACTGCACGGCCTTTATCCTTCTGGGCCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394048.10
CDS-3UTR CCA 90 bp GGTTCTTCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGCACCGGGCTACACCCTaGGAAAGGTCTGTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: GSSLWSGKGPNMGLLGERHRATP*ERSVSA
Trigger: AGCTGAGACAGACCTTTCCCAGGGTGTAGCCCGGTG...CCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGAAGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp ATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTATACGGTTCTTCTCTTTaGTCAGGCAAAGGCCCGAAT +
Preference number: 4 (lower is better)
Translates to: MGLLGERAEGHRLCPWTLYGSSL*SGKGPN
Trigger: ATTCGGGCCTTTGCCTGACCAAAGAGAAGAACCGTA...TAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp CTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCATTCCAGCGGGGATTaGGATCTTCCCGAACAACAT +
Preference number: 4 (lower is better)
Translates to: LWSGKGPNMGLLGERAEGHSSGD*DLPEQH
Trigger: ATGTTGTTCGGGAAGATCTCAATCCCCGCTGGAATG...CCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR GCA 90 bp TTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTAGGCTACTGTAGACAGCCTTaGTCTCCTGAGTCACATCCT +
Preference number: 4 (lower is better)
Translates to: LGERAEGHRLCPWTLALGYCRQP*SPESHP
Trigger: AGGATGTGACTCAGGAGAGCAAGGCTGTCTACAGTA...GCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR GCA 90 bp AGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTAGGCTCATCACATTGAGGCGGGACGCACTTTACACCTaGCCAGAAAATCATCCTTGT +
Preference number: 4 (lower is better)
Translates to: RAQALPLDPSFRLITLRRDALYT*PENHPC
Trigger: ACAAGGATGATTTTCTGGGCAGGTGTAAAGTGCGTC...CCGCCTCAATGTGATGAGCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR GCA 90 bp GGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTATCAAACTATTCACCTaGAGCACCTCCTCTAACTCA +
Preference number: 4 (lower is better)
Translates to: GPNMGLLGERAEGHRLCPIKLFT*STSSNS
Trigger: TGAGTTAGAGGAGGTGCTGCAGGTGAATAGTTTGAT...AGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR GCA 90 bp TCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAACCAGCTCCTAGGAGCTaGCCTTGTCCTTGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: SLWSGKGPNMGLLGERAEPAPRS*PCPCCP
Trigger: TGGACAACAAGGACAAGGGCAGCTCCTAGGAGCTGG...TTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp GGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTGTAAATGTTTGCAGATaGGGGTTAGATCCCCTAACA +
Preference number: 4 (lower is better)
Translates to: GPNMGLLGERAEGHRLCPVNVCR*GLDPLT
Trigger: TGTTAGGGGATCTAACCCCCATCTGCAAACATTTAC...AGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp TTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTAGGCTCCAATGATGCGCAATaGCTTTTCACCCAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: LGERAEGHRLCPWTLALGSNDAQ*LFTQFH
Trigger: GTGGAACTGGGTGAAAAGCCATTGCGCATCATTGGA...GCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp GGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTAGGCTCACTCTTTTCTCTGACCTaGGTGAACCTTGACTCCAAT +
Preference number: 4 (lower is better)
Translates to: GERAEGHRLCPWTLALGSLFSLT*VNLDSN
Trigger: ATTGGAGTCAAGGTTCACCCAGGTCAGAGAAAAGAG...TGAGCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp TTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTAGGCTCACATATTTGTCCTTaGAACTCAGCCCTCGAGCAG +
Preference number: 4 (lower is better)
Translates to: LGERAEGHRLCPWTLALGSHICP*NSALEQ
Trigger: CTGCTCGAGGGCTGAGTTCCAAGGACAAATATGTGA...GCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp GGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTAGGCTCAAGTCTCTCCCCACTGTaGGTTGAGTTCTTCATCAAT +
Preference number: 4 (lower is better)
Translates to: GERAEGHRLCPWTLALGSSLSPL*VEFFIN
Trigger: ATTGATGAAGAACTCAACCCACAGTGGGGAGAGACT...TGAGCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp TCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAACCCACACTGGGCAGTTaGTACTGTAGACAGCCTTGC +
Preference number: 4 (lower is better)
Translates to: SLWSGKGPNMGLLGERAEPTLGS*YCRQPC
Trigger: GCAAGGCTGTCTACAGTACCAACTGCCCAGTGTGGG...TTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp GGTTCTTCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGCCCACACTGGGCAGTTaGTACTGTAGACAGCCTTGC +
Preference number: 4 (lower is better)
Translates to: GSSLWSGKGPNMGLLGERPTLGS*YCRQPC
Trigger: GCAAGGCTGTCTACAGTACCAACTGCCCAGTGTGGG...CCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGAAGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp GGTTCTTCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGCTGAGCTGGAACCACTaGTCCAGGATGAGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: GSSLWSGKGPNMGLLGERLSWNH*SRMSSG
Trigger: CCCAGAACTCATCCTGGACCAGTGGTTCCAGCTCAG...CCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGAAGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
3UTR CAA 72 bp AGGCCGTGCAGTAAAGGGAACATACGGTTCTTCTCTTaGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGG +
Preference number: 4 (lower is better)
Translates to: RPCSKGNIRFFS*VRQRPEYGPVR
Trigger: CCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGAAGAACCGTATGTTCCCTTTACTGCACGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394048.10
CDS-3UTR TCA 90 bp TGGGGACAGAACTGGACATGGGGGCCTGAGCTGCTGAACATTTGCTACATGCAGGGGCCACAATCTTATTaGGCCATTCAGCCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: WGQNWTWGPELLNICYMQGPQSY*AIQPFP
Trigger: TGGAAAAGGCTGAATGGCTCAATAAGATTGTGGCCC...CTGCATGTAGCAAATGTTCAGCAGCTCAGGCCCCCATGTCCAGTTCTGTCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000394048.10
CDS-3UTR TCA 90 bp AACATACGGTTCTTCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTCGGATGAAGAACATTaGCACAGCCCCCACGAAGGG +
Preference number: 4 (lower is better)
Translates to: NIRFFSLVRQRPEYGPVRSDEEH*HSPHEG
Trigger: CCCTTCGTGGGGGCTGTGTCAATGTTCTTCATCCGA...CCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGAAGAACCGTATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp AACATACGGTTCTTCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGCGAGCAGCCAGCAGGTaGATTCGAATAATGCCCCTG +
Preference number: 4 (lower is better)
Translates to: NIRFFSLVRQRPEYGPVRRAASR*IRIMPL
Trigger: CAGGGGCATTATTCGAATTCACCTGCTGGCTGCTCG...CCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGAAGAACCGTATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp CCAGGGGCCCAGAAGGATAAAGGCCGTGCAGTAAAGGGAACATACGGTTCTTCTGGCCTGGAACTGATGTaGCGATCACCTCAAAAACCT +
Preference number: 4 (lower is better)
Translates to: PGAQKDKGRAVKGTYGSSGLELM*RSPQKP
Trigger: AGGTTTTTGAGGTGATCGTCACATCAGTTCCAGGCC...AGAAGAACCGTATGTTCCCTTTACTGCACGGCCTTTATCCTTCTGGGCCCCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394048.10
CDS-3UTR TCA 90 bp CAGTGGGGACAGAACTGGACATGGGGGCCTGAGCTGCTGAACATTTGCTACATGAGCTCCGCACTCTTCTaGGTCTGGATCAAACTATTC +
Preference number: 4 (lower is better)
Translates to: QWGQNWTWGPELLNICYMSSALF*VWIKLF
Trigger: GAATAGTTTGATCCAGACTCAGAAGAGTGCGGAGCT...CATGTAGCAAATGTTCAGCAGCTCAGGCCCCCATGTCCAGTTCTGTCCCCACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394048.10
CDS-3UTR TCA 90 bp GGTTCTTCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGAGGGACCGGCAACCATaGACAATGCTGACCAGCTTT +
Preference number: 4 (lower is better)
Translates to: GSSLWSGKGPNMGLLGERRDRQP*TMLTSF
Trigger: AAAGCTGGTCAGCATTGTTCATGGTTGCCGGTCCCT...CCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGAAGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp CTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCAGCTCACGCTCTCTTaGCATGAAGGAGGAATTAGA +
Preference number: 4 (lower is better)
Translates to: LWSGKGPNMGLLGERAEGQLTLS*HEGGIR
Trigger: TCTAATTCCTCCTTCATGTCAAGAGAGCGTGAGCTG...CCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp TCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAATTAGGCTCATCACATTaGGGCGGTGATGGAGCGAGA +
Preference number: 4 (lower is better)
Translates to: SLWSGKGPNMGLLGERAELGSSH*GGDGAR
Trigger: TCTCGCTCCATCACCGCCTCAATGTGATGAGCCTAA...TTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR GCA 90 bp ATGGAGCGAGACGAAGGCAGGAAGACAGAGCAGTCAGGCTGGGACTCGCCAGCTGTAAATGTAAATGTTTaGAGATGGGGGTTAGATCCC +
Preference number: 4 (lower is better)
Translates to: MERDEGRKTEQSGWDSPAVNVNV*RWGLDP
Trigger: GGGATCTAACCCCCATCTGCAAACATTTACATTTAC...AGCTGGCGAGTCCCAGCCTGACTGCTCTGTCTTCCTGCCTTCGTCTCGCTCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR GCA 90 bp TTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTAGGCTTCCACTGTAGAACCTaGTCCAGTTTCTCTGCATCT +
Preference number: 4 (lower is better)
Translates to: LGERAEGHRLCPWTLALGFHCRT*SSFSAS
Trigger: AGATGCAGAGAAACTGGAGCAGGTTCTACAGTGGAA...GCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp GGTTCTTCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGGGTAGACAACTAAGATaGCAGCTGACGGGGGATCTG +
Preference number: 4 (lower is better)
Translates to: GSSLWSGKGPNMGLLGERGRQLR*QLTGDL
Trigger: CAGATCCCCCGTCAGCTGCCATCTTAGTTGTCTACC...CCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGAAGAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp GGTTCTTCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGTCTTCCCGAACAACATaGCTCCGGAAGCTTCGTCCT +
Preference number: 4 (lower is better)
Translates to: GSSLWSGKGPNMGLLGERSSRTT*LRKLRP
Trigger: AGGACGAAGCTTCCGGAGCCATGTTGTTCGGGAAGA...CCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGAAGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp AACATACGGTTCTTCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGCACAGGCTCTGCCCTTaGACCCTAGCTTTAGGCTCA +
Preference number: 4 (lower is better)
Translates to: NIRFFSLVRQRPEYGPVRHRLCP*TLALGS
Trigger: TGAGCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTG...CCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGAAGAACCGTATGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp GGTTCTTCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGAAGGCCCTGAGGAGTTaGGAGGAAGGGAGAACAATG +
Preference number: 4 (lower is better)
Translates to: GSSLWSGKGPNMGLLGERKALRS*EEGRTM
Trigger: CATTGTTCTCCCTTCCTCCCAACTCCTCAGGGCCTT...CCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGAAGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394048.10
CDS-3UTR TCA 90 bp TTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTAGGCAGTCACATCCTGAATTaGCAGTTGTACCATAGGGTT +
Preference number: 4 (lower is better)
Translates to: LGERAEGHRLCPWTLALGSHILN*QLYHRV
Trigger: AACCCTATGGTACAACTGTCAATTCAGGATGTGACT...GCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp AGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTAGGCTCATCACATTGAGGCGGAGTACAGGATCCTCATaGCTAGTTTCATATAGAGTC +
Preference number: 4 (lower is better)
Translates to: RAQALPLDPSFRLITLRRSTGSS*LVSYRV
Trigger: GACTCTATATGAAACTAGTCATGAGGATCCTGTACT...CCGCCTCAATGTGATGAGCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp AGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTAGGCTCATCACATTGAGGCGGATAGTCTTGGTTTTATaGGAACTATCTCCCACAGTG +
Preference number: 4 (lower is better)
Translates to: RAQALPLDPSFRLITLRRIVLVL*ELSPTV
Trigger: CACTGTGGGAGATAGTTCTCATAAAACCAAGACTAT...CCGCCTCAATGTGATGAGCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp AACATACGGTTCTTCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTTAGGCTCATCACATTaGGGCGGTGATGGAGCGAGA +
Preference number: 4 (lower is better)
Translates to: NIRFFSLVRQRPEYGPVRLGSSH*GGDGAR
Trigger: TCTCGCTCCATCACCGCCTCAATGTGATGAGCCTAA...CCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGAAGAACCGTATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR GCA 90 bp ATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGTAAATGTAAATGTTTaGAGATGGGGGTTAGATCCC +
Preference number: 4 (lower is better)
Translates to: MGLLGERAEGHRLCPWTLVNVNV*RWGLDP
Trigger: GGGATCTAACCCCCATCTGCAAACATTTACATTTAC...TAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp CTGGAGAGGTTAGCCTGTCCACCTTCCCACCCATGTGTGGTAGGGAAGAAGGTGGTAAATGTTTGCAGATaGGGGTTAGATCCCCTAACA +
Preference number: 4 (lower is better)
Translates to: LERLACPPSHPCVVGKKVVNVCR*GLDPLT
Trigger: TGTTAGGGGATCTAACCCCCATCTGCAAACATTTAC...CACCTTCTTCCCTACCACACATGGGTGGGAAGGTGGACAGGCTAACCTCTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394048.10
CDS-3UTR CCA 90 bp CTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCTCTTTTCTCTGACCTaGGTGAACCTTGACTCCAAT +
Preference number: 4 (lower is better)
Translates to: LWSGKGPNMGLLGERAEGLFSLT*VNLDSN
Trigger: ATTGGAGTCAAGGTTCACCCAGGTCAGAGAAAAGAG...CCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp GGTTCTTCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGGACAACCAGGCACCGTaGGGAAGCATATTTCTGATG +
Preference number: 4 (lower is better)
Translates to: GSSLWSGKGPNMGLLGERDNQAP*GSIFLM
Trigger: CATCAGAAATATGCTTCCCCACGGTGCCTGGTTGTC...CCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGAAGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp CCAGGGGCCCAGAAGGATAAAGGCCGTGCAGTAAAGGGAACATACGGTTCTTCTTTGGCAATCAGGTCCTaGGCCTCTAATACATGGATC +
Preference number: 4 (lower is better)
Translates to: PGAQKDKGRAVKGTYGSSLAIRS*ASNTWI
Trigger: GATCCATGTATTAGAGGCCCAGGACCTGATTGCCAA...AGAAGAACCGTATGTTCCCTTTACTGCACGGCCTTTATCCTTCTGGGCCCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394048.10
CDS-3UTR CCA 90 bp TCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAATCAACCTCTAGCTCTTaGCCTGGAACTGATGTGACG +
Preference number: 4 (lower is better)
Translates to: SLWSGKGPNMGLLGERAESTSSS*PGTDVT
Trigger: CGTCACATCAGTTCCAGGCCAAGAGCTAGAGGTTGA...TTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp GGTTCTTCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGGTAGCTGCATGCCCTTaGCTCCTGCTTTGCAAAAAT +
Preference number: 4 (lower is better)
Translates to: GSSLWSGKGPNMGLLGERVAACP*LLLCKN
Trigger: ATTTTTGCAAAGCAGGAGTCAAGGGCATGCAGCTAC...CCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGAAGAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp CTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGAGTCACATCCTGAATTaGCAGTTGTACCATAGGGTT +
Preference number: 4 (lower is better)
Translates to: LWSGKGPNMGLLGERAEGSHILN*QLYHRV
Trigger: AACCCTATGGTACAACTGTCAATTCAGGATGTGACT...CCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp AACATACGGTTCTTCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGCATTCCAGCGGGGATTaGGATCTTCCCGAACAACAT +
Preference number: 4 (lower is better)
Translates to: NIRFFSLVRQRPEYGPVRHSSGD*DLPEQH
Trigger: ATGTTGTTCGGGAAGATCTCAATCCCCGCTGGAATG...CCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGAAGAACCGTATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp TCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAATGTTTAAGACTGTGGTaGGACGCACTTTACACCTGC +
Preference number: 4 (lower is better)
Translates to: SLWSGKGPNMGLLGERAECLRLW*DALYTC
Trigger: GCAGGTGTAAAGTGCGTCTCACCACAGTCTTAAACA...TTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp TCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAAGCTCCGCACTCTTCTaGGTCTGGATCAAACTATTC +
Preference number: 4 (lower is better)
Translates to: SLWSGKGPNMGLLGERAESSALF*VWIKLF
Trigger: GAATAGTTTGATCCAGACTCAGAAGAGTGCGGAGCT...TTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp GGTTCTTCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGATCCCAGACAGGGGCTaGAGTTTGCGAAATAGTCTT +
Preference number: 4 (lower is better)
Translates to: GSSLWSGKGPNMGLLGERIPDRG*SLRNSL
Trigger: AAGACTATTTCGCAAACTTCAGCCCCTGTCTGGGAT...CCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGAAGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR GCA 90 bp ATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTACATGCCCTTGACTCCTaGTTTGCAAAAATATTTCTT +
Preference number: 4 (lower is better)
Translates to: MGLLGERAEGHRLCPWTLHALDS*FAKIFL
Trigger: AAGAAATATTTTTGCAAAGCAGGAGTCAAGGGCATG...TAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR GCA 90 bp TTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTAGGCCATCCAGCTTCATTCTaGCCAGAAAGTCATCTTTAT +
Preference number: 4 (lower is better)
Translates to: LGERAEGHRLCPWTLALGHPASF*PESHLY
Trigger: ATAAAGATGACTTTCTGGGCAGAATGAAGCTGGATG...GCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp TCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAACTTCTTCAGCTGTGGTaGGTACAATTCAGAGGTCAC +
Preference number: 4 (lower is better)
Translates to: SLWSGKGPNMGLLGERAELLQLW*VQFRGH
Trigger: GTGACCTCTGAATTGTACCCACCACAGCTGAAGAAG...TTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000267113.4
CDS-3UTR CCA 90 bp GGTTCTTCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGTGGGCCTCTAATACATaGATCCGAAGCACATGCTCA +
Preference number: 4 (lower is better)
Translates to: GSSLWSGKGPNMGLLGERWASNT*IRSTCS
Trigger: TGAGCATGTGCTTCGGATCCATGTATTAGAGGCCCA...CCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGAAGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp TCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAATACGGTTCTTCTCTTTaGTCAGGCAAAGGCCCGAAT +
Preference number: 4 (lower is better)
Translates to: SLWSGKGPNMGLLGERAEYGSSL*SGKGPN
Trigger: ATTCGGGCCTTTGCCTGACCAAAGAGAAGAACCGTA...TTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp CTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGATAGTCTTGGTTTTATaGGAACTATCTCCCACAGTG +
Preference number: 4 (lower is better)
Translates to: LWSGKGPNMGLLGERAEGIVLVL*ELSPTV
Trigger: CACTGTGGGAGATAGTTCTCATAAAACCAAGACTAT...CCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp TCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAAACCATGAACAATGCTaGCCAGCTTTCGTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: SLWSGKGPNMGLLGERAENHEQC*PAFVLH
Trigger: GTGAAGAACGAAAGCTGGTCAGCATTGTTCATGGTT...TTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR GCA 90 bp TTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTAGGCCATGCCCTTGACTCCTaGTTTGCAAAAATATTTCTT +
Preference number: 4 (lower is better)
Translates to: LGERAEGHRLCPWTLALGHALDS*FAKIFL
Trigger: AAGAAATATTTTTGCAAAGCAGGAGTCAAGGGCATG...GCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR GCA 90 bp AACATACGGTTCTTCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTACTGTAGACAGCCTTaGTCTCCTGAGTCACATCCT +
Preference number: 4 (lower is better)
Translates to: NIRFFSLVRQRPEYGPVRYCRQP*SPESHP
Trigger: AGGATGTGACTCAGGAGAGCAAGGCTGTCTACAGTA...CCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGAAGAACCGTATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR GCA 90 bp GGTTCTTCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGGACGCACTTTACACCTaGCCAGAAAATCATCCTTGT +
Preference number: 4 (lower is better)
Translates to: GSSLWSGKGPNMGLLGERDALYT*PENHPC
Trigger: ACAAGGATGATTTTCTGGGCAGGTGTAAAGTGCGTC...CCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGAAGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR GCA 90 bp CCAGGGGCCCAGAAGGATAAAGGCCGTGCAGTAAAGGGAACATACGGTTCTTCTATCAAACTATTCACCTaGAGCACCTCCTCTAACTCA +
Preference number: 4 (lower is better)
Translates to: PGAQKDKGRAVKGTYGSSIKLFT*STSSNS
Trigger: TGAGTTAGAGGAGGTGCTGCAGGTGAATAGTTTGAT...AGAAGAACCGTATGTTCCCTTTACTGCACGGCCTTTATCCTTCTGGGCCCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394048.10
CDS-3UTR CCA 90 bp TGGGGACAGAACTGGACATGGGGGCCTGAGCTGCTGAACATTTGCTACATGCAGAAAGTCATCTTTATCTaGATCCTTGTCGAACACCTC +
Preference number: 4 (lower is better)
Translates to: WGQNWTWGPELLNICYMQKVIFI*ILVEHL
Trigger: GAGGTGTTCGACAAGGATCCAGATAAAGATGACTTT...CTGCATGTAGCAAATGTTCAGCAGCTCAGGCCCCCATGTCCAGTTCTGTCCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394048.10
CDS-3UTR TCA 90 bp GGTTCTTCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGAGTACAGGATCCTCATaGCTAGTTTCATATAGAGTC +
Preference number: 4 (lower is better)
Translates to: GSSLWSGKGPNMGLLGERSTGSS*LVSYRV
Trigger: GACTCTATATGAAACTAGTCATGAGGATCCTGTACT...CCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGAAGAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR TCA 90 bp AAAAGATCCTTCCAAAGCTGTATTTGGCATAAGCTAATACCACTGCTAGTGCTGGGGGGCCTGAGCTGCTaGACATTTGCTACATGCAGT +
Preference number: 4 (lower is better)
Translates to: KRSFQSCIWHKLIPLLVLGGLSC*TFATCS
Trigger: ACTGCATGTAGCAAATGTTCAGCAGCTCAGGCCCCC...CAGCACTAGCAGTGGTATTAGCTTATGCCAAATACAGCTTTGGAAGGATCTTTT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000394048.10
CDS-3UTR GCA 90 bp GGTTCTTCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGCATCCAGCTTCATTCTaGCCAGAAAGTCATCTTTAT +
Preference number: 4 (lower is better)
Translates to: GSSLWSGKGPNMGLLGERHPASF*PESHLY
Trigger: ATAAAGATGACTTTCTGGGCAGAATGAAGCTGGATG...CCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGAAGAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp GGTTCTTCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGAAAGTCATCTTTATCTaGATCCTTGTCGAACACCTC +
Preference number: 4 (lower is better)
Translates to: GSSLWSGKGPNMGLLGERKVIFI*ILVEHL
Trigger: GAGGTGTTCGACAAGGATCCAGATAAAGATGACTTT...CCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGAAGAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CCA 90 bp AAAAGATCCTTCCAAAGCTGTATTTGGCATAAGCTAATACCACTGCTAGTGCTGCGCTTCCTCCCACACTaGGCAGTTGGTACTGTAGAC +
Preference number: 4 (lower is better)
Translates to: KRSFQSCIWHKLIPLLVLRFLPH*AVGTVD
Trigger: GTCTACAGTACCAACTGCCCAGTGTGGGAGGAAGCG...CAGCACTAGCAGTGGTATTAGCTTATGCCAAATACAGCTTTGGAAGGATCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394048.10
CDS-3UTR TCA 90 bp AAAAGATCCTTCCAAAGCTGTATTTGGCATAAGCTAATACCACTGCTAGTGCTGAAGTGCATATGGGTCTaGCTTGCCCTCAATCAGGCC +
Preference number: 4 (lower is better)
Translates to: KRSFQSCIWHKLIPLLVLKCIWV*LALNQA
Trigger: GGCCTGATTGAGGGCAAGTCAGACCCATATGCACTT...CAGCACTAGCAGTGGTATTAGCTTATGCCAAATACAGCTTTGGAAGGATCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394048.10
CDS-3UTR CCA 90 bp AAAAGATCCTTCCAAAGCTGTATTTGGCATAAGCTAATACCACTGCTAGTGCTGCGACTGCAGAATGTCTaGGTACCCAAACGCACAAGT +
Preference number: 4 (lower is better)
Translates to: KRSFQSCIWHKLIPLLVLRLQNV*VPKRTS
Trigger: ACTTGTGCGTTTGGGTACCCAGACATTCTGCAGTCG...CAGCACTAGCAGTGGTATTAGCTTATGCCAAATACAGCTTTGGAAGGATCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394048.10
CDS-3UTR TCA 90 bp AAAAGATCCTTCCAAAGCTGTATTTGGCATAAGCTAATACCACTGCTAGTGCTGCATCACCTACATAGCTaGTGTTCAAGTCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: KRSFQSCIWHKLIPLLVLHHLHS*CSSPAG
Trigger: TCCTGCTGGACTTGAACATCAGCTATGTAGGTGATG...CAGCACTAGCAGTGGTATTAGCTTATGCCAAATACAGCTTTGGAAGGATCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394048.10
CDS-3UTR CCA 90 bp AAAAGATCCTTCCAAAGCTGTATTTGGCATAAGCTAATACCACTGCTAGTGCTGTGGGCCTCTAATACATaGATCCGAAGCACATGCTCA +
Preference number: 4 (lower is better)
Translates to: KRSFQSCIWHKLIPLLVLWASNT*IRSTCS
Trigger: TGAGCATGTGCTTCGGATCCATGTATTAGAGGCCCA...CAGCACTAGCAGTGGTATTAGCTTATGCCAAATACAGCTTTGGAAGGATCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394048.10
CDS TCA 90 bp CCCGGCCAAATACACAGGTATCAGCACCAGCAACCGCCTCCCGAATaGAGTCAGCACCGCCAGGGCCTCACCCGCCGCGCCAGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: PGQIHRYQHQQPPPE*SQHRQGLTRRARAS
Trigger: GCTGGCCCTGGCGCGGCGGGTGAGGCCCTGGCGGTGCTGACTTCATTCGGGAGGCGGTTGCTGGTGCTGATACCTGTGTATTTGGCCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS TCA 90 bp GCCAGCCCAGGTAGAGGGCGAGGCCGAAGAGCACGAAACCCACGCTaGGTCCCACTGCCCCGGCCAAATACACAGGTATCAGCACCAGCA +
Preference number: 5 (lower is better)
Translates to: ASPGRGRGRRARNPR*VPLPRPNTQVSAPA
Trigger: TGCTGGTGCTGATACCTGTGTATTTGGCCGGGGCAGTGGGACTCAGCGTGGGTTTCGTGCTCTTCGGCCTCGCCCTCTACCTGGGCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS GCA 90 bp GTAGAGGGCGAGGCCGAAGAGCACGAAACCCACGCTGAGTCCCACTaGCCCGGCCAAATACACAGGTATCAGCACCAGCAACCGCCTCCC +
Preference number: 5 (lower is better)
Translates to: VEGEAEEHETHAESH*PGQIHRYQHQQPPP
Trigger: GGGAGGCGGTTGCTGGTGCTGATACCTGTGTATTTGGCCGGGGCAGTGGGACTCAGCGTGGGTTTCGTGCTCTTCGGCCTCGCCCTCTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS GCA 90 bp GGCTATCAGGAGTCGTGTGACAGGGTCGAGGTGGGGCATCCACACTaGTGCCTCTCTGGGGATTCTCACTGTCCACGTCCCAAGCACCAG +
Preference number: 5 (lower is better)
Translates to: GYQESCDRVEVGHPH*CLSGDSHCPRPKHQ
Trigger: CTGGTGCTTGGGACGTGGACAGTGAGAATCCCCAGAGAGGCAGCAGTGTGGATGCCCCACCTCGACCCTGTCACACGACTCCTGATAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS GCA 90 bp TATCAGGAGTCGTGTGACAGGGTCGAGGTGGGGCATCCACACTGCTaGCTCTCTGGGGATTCTCACTGTCCACGTCCCAAGCACCAGGAC +
Preference number: 5 (lower is better)
Translates to: YQESCDRVEVGHPHC*LSGDSHCPRPKHQD
Trigger: GTCCTGGTGCTTGGGACGTGGACAGTGAGAATCCCCAGAGAGGCAGCAGTGTGGATGCCCCACCTCGACCCTGTCACACGACTCCTGATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS CCA 90 bp GTGCCACAGAGGAGAGGGAGTGTGTGTGACTCCTCACACTCAGGGTaGGCGAGGGGCGAGGATGCCCCAAAGGTTCATTCCTCACAGAGT +
Preference number: 5 (lower is better)
Translates to: VPQRRGSVCDSSHSG*ARGEDAPKVHSSQS
Trigger: ACTCTGTGAGGAATGAACCTTTGGGGCATCCTCGCCCCTCGCCCACCCTGAGTGTGAGGAGTCACACACACTCCCTCTCCTCTGTGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550986.1
CDS-3UTR CAA 90 bp ATGGAGCGAGACGAAGGCAGGAAGACAGAGCAGTCAGGCTGGGACTCGCCAGCTCTGGAGATCGCTCCATaGTGCCACCTCTGGGAGGAT +
Preference number: 5 (lower is better)
Translates to: MERDEGRKTEQSGWDSPALEIAP*CHLWED
Trigger: ATCCTCCCAGAGGTGGCACAATGGAGCGATCTCCAG...AGCTGGCGAGTCCCAGCCTGACTGCTCTGTCTTCCTGCCTTCGTCTCGCTCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CAA 90 bp GGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGCTGGCACCAGTAATCGGTaGGGCAACACGAGGAAGGCA +
Preference number: 5 (lower is better)
Translates to: GLLGERAEGHRLCPWTLAGTSNR*GNTRKA
Trigger: TGCCTTCCTCGTGTTGCCCAACCGATTACTGGTGCC...AGCTAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CAA 90 bp ATGGAGCGAGACGAAGGCAGGAAGACAGAGCAGTCAGGCTGGGACTCGCCAGCTGGCACCAGTAATCGGTaGGGCAACACGAGGAAGGCA +
Preference number: 5 (lower is better)
Translates to: MERDEGRKTEQSGWDSPAGTSNR*GNTRKA
Trigger: TGCCTTCCTCGTGTTGCCCAACCGATTACTGGTGCC...AGCTGGCGAGTCCCAGCCTGACTGCTCTGTCTTCCTGCCTTCGTCTCGCTCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CAA 90 bp GGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGCTCCCAAGAAACGGTCTTaGGCAATCAGGTCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: GLLGERAEGHRLCPWTLAPKKRS*AIRSWA
Trigger: GGCCCAGGACCTGATTGCCAAAGACCGTTTCTTGGG...AGCTAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CAA 90 bp AGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTAGGCTCATCACATTGAGGCGGGCACAGGCTCTGCCCTaGGACCCTAGCTTTAGGCTC +
Preference number: 5 (lower is better)
Translates to: RAQALPLDPSFRLITLRRAQALP*DPSFRL
Trigger: GAGCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGC...CCGCCTCAATGTGATGAGCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS TCA 90 bp ATCCGAAGCACATGCTCAGTCCCAAACTGGCTATCAGGAGTCGTGTaGCAGGGTCGAGGTGGGGCATCCACACTGCTGCCTCTCTGGGGA +
Preference number: 5 (lower is better)
Translates to: IRSTCSVPNWLSGVV*QGRGGASTLLPLWG
Trigger: TCCCCAGAGAGGCAGCAGTGTGGATGCCCCACCTCGACCCTGTCACACGACTCCTGATAGCCAGTTTGGGACTGAGCATGTGCTTCGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS TCA 90 bp TCCACGTCTGGGAAGCTGACCTGGAGGTGGGGAAGGCAGAGACAGTaGCGTGCAGCACACCCTCGCCTCTGGTTTCCTACTAAGATGCTG +
Preference number: 5 (lower is better)
Translates to: STSGKLTWRWGRQRQ*RAAHPRLWFPTKML
Trigger: CAGCATCTTAGTAGGAAACCAGAGGCGAGGGTGTGCTGCACGTCACTGTCTCTGCCTTCCCCACCTCCAGGTCAGCTTCCCAGACGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550986.1
CDS GCA 90 bp AGGAAGACAGAGCAGTCAGGCTGGGACTCGCCAGCTCCTAGGAGCTaGCCTTGTCCTTGTTGTCCATCAGGTCATACCACCGGGCTACAC +
Preference number: 5 (lower is better)
Translates to: RKTEQSGWDSPAPRS*PCPCCPSGHTTGLH
Trigger: GTGTAGCCCGGTGGTATGACCTGATGGACAACAAGGACAAGGGCAGCTCCTAGGAGCTGGCGAGTCCCAGCCTGACTGCTCTGTCTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267113.4
ENST00000394048.10
ENST00000550515.1
CDS-3UTR CAA 90 bp ATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGTCATCCCTGTCCAGTaGATGTCTAGGGTCGGGCGT +
Preference number: 5 (lower is better)
Translates to: MGLLGERAEGHRLCPWTLVIPVQ*MSRVGR
Trigger: ACGCCCGACCCTAGACATCAACTGGACAGGGATGAC...TAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CAA 90 bp GGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGCTGCATATGGGTCTGACTaGCCCTCAATCAGGCCCTTC +
Preference number: 5 (lower is better)
Translates to: GLLGERAEGHRLCPWTLAAYGSD*PSIRPF
Trigger: GAAGGGCCTGATTGAGGGCAAGTCAGACCCATATGC...AGCTAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CAA 90 bp GGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGTGAGGTCCTCCTCTaGGTGCCTCGGTTCTTGTCT +
Preference number: 5 (lower is better)
Translates to: GPNMGLLGERAEGHRLCPCEVLL*VPRFLS
Trigger: AGACAAGAACCGAGGCACCAAGAGGAGGACCTCACA...AGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CAA 90 bp ATGGAGCGAGACGAAGGCAGGAAGACAGAGCAGTCAGGCTGGGACTCGCCAGCTTGTGAGGTCCTCCTCTaGGTGCCTCGGTTCTTGTCT +
Preference number: 5 (lower is better)
Translates to: MERDEGRKTEQSGWDSPACEVLL*VPRFLS
Trigger: AGACAAGAACCGAGGCACCAAGAGGAGGACCTCACA...AGCTGGCGAGTCCCAGCCTGACTGCTCTGTCTTCCTGCCTTCGTCTCGCTCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS TCA 90 bp CCCAGGCAGGTAGCTCTCGATGACTCATATAGAGAGTTTTCGCAGTaGGCTGCTCCTCGTCGTCCAGTAGCTGCCTCGCTGCTCGAAGGC +
Preference number: 5 (lower is better)
Translates to: PRQVALDDSYREFSQ*AAPRRPVAASLLEG
Trigger: GCCTTCGAGCAGCGAGGCAGCTACTGGACGACGAGGAGCAGCTCACTGCGAAAACTCTCTATATGAGTCATCGAGAGCTACCTGCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267113.4
ENST00000394048.10
ENST00000551790.5
CDS-3UTR CAA 90 bp CTGGAGAGGTTAGCCTGTCCACCTTCCCACCCATGTGTGGTAGGGAAGAAGGTGGTCATCCCTGTCCAGTaGATGTCTAGGGTCGGGCGT +
Preference number: 5 (lower is better)
Translates to: LERLACPPSHPCVVGKKVVIPVQ*MSRVGR
Trigger: ACGCCCGACCCTAGACATCAACTGGACAGGGATGAC...CACCTTCTTCCCTACCACACATGGGTGGGAAGGTGGACAGGCTAACCTCTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394048.10
CDS-3UTR CAA 90 bp GGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTAGGCTCACAACTGAGCCACATCTaGAAGGTCAGGCACAAGGGG +
Preference number: 5 (lower is better)
Translates to: GERAEGHRLCPWTLALGSQLSHI*KVRHKG
Trigger: CCCCTTGTGCCTGACCTTCAAGATGTGGCTCAGTTG...TGAGCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CAA 90 bp ATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGCATATGGGTCTGACTaGCCCTCAATCAGGCCCTTC +
Preference number: 5 (lower is better)
Translates to: MGLLGERAEGHRLCPWTLAYGSD*PSIRPF
Trigger: GAAGGGCCTGATTGAGGGCAAGTCAGACCCATATGC...TAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CAA 90 bp GGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTTGGTGCCTCGGTTCTaGTCTGGCAGTAGCAACAGT +
Preference number: 5 (lower is better)
Translates to: GPNMGLLGERAEGHRLCPLVPRF*SGSSNS
Trigger: ACTGTTGCTACTGCCAGACAAGAACCGAGGCACCAA...AGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CAA 90 bp CTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGGCACAGGCTCTGCCCTaGGACCCTAGCTTTAGGCTC +
Preference number: 5 (lower is better)
Translates to: LWSGKGPNMGLLGERAEGAQALP*DPSFRL
Trigger: GAGCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGC...CCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CAA 90 bp GGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTAGTTGTACCATAGGGTaGGGTTCCTTGTTCCCCTTC +
Preference number: 5 (lower is better)
Translates to: GPNMGLLGERAEGHRLCPSCTIG*GSLFPF
Trigger: GAAGGGGAACAAGGAACCCAACCCTATGGTACAACT...AGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CAA 90 bp ATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTACTGCCCTTGTCCTTGTaGTCCATCAGGTCATACCAC +
Preference number: 5 (lower is better)
Translates to: MGLLGERAEGHRLCPWTLLPLSL*SIRSYH
Trigger: GTGGTATGACCTGATGGACAACAAGGACAAGGGCAG...TAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CAA 90 bp GGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGCTATAGGGTTGGGTTCCTaGTTCCCCTTCTTCAGAGGA +
Preference number: 5 (lower is better)
Translates to: GLLGERAEGHRLCPWTLAIGLGS*FPFFRG
Trigger: TCCTCTGAAGAAGGGGAACAAGGAACCCAACCCTAT...AGCTAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394048.10
CDS-3UTR CAA 90 bp GGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGCTTGGGCCACAATCTTATaGAGCCATTCAGCCTTTTCC +
Preference number: 5 (lower is better)
Translates to: GLLGERAEGHRLCPWTLAWATIL*SHSAFS
Trigger: GGAAAAGGCTGAATGGCTCAATAAGATTGTGGCCCA...AGCTAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CAA 90 bp GCTAGTGCTGCCACTGGCCAGGCACAGATACAGAAGGCCCTGAGGAGTTGGGAGTGTAGCTGCATGCCCTaGACTCCTGCTTTGCAAAAA +
Preference number: 5 (lower is better)
Translates to: ASAATGQAQIQKALRSWECSCMP*TPALQK
Trigger: TTTTTGCAAAGCAGGAGTCAAGGGCATGCAGCTACA...CTCCCAACTCCTCAGGGCCTTCTGTATCTGTGCCTGGCCAGTGGCAGCACTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394048.10
CDS-3UTR CAA 90 bp ATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTATCATTCCAGCGGGGATaGAGATCTTCCCGAACAACA +
Preference number: 5 (lower is better)
Translates to: MGLLGERAEGHRLCPWTLSFQRG*RSSRTT
Trigger: TGTTGTTCGGGAAGATCTCAATCCCCGCTGGAATGA...TAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CAA 90 bp CAGTGGGGACAGAACTGGACATGGGGGCCTGAGCTGCTGAACATTTGCTACATGCCACTACTTGGAGGCTaGAGTAGAATCCACGCGTCC +
Preference number: 5 (lower is better)
Translates to: QWGQNWTWGPELLNICYMPLLGG*SRIHAS
Trigger: GGACGCGTGGATTCTACTCAAGCCTCCAAGTAGTGG...CATGTAGCAAATGTTCAGCAGCTCAGGCCCCCATGTCCAGTTCTGTCCCCACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394048.10
CDS-3UTR CAA 90 bp TCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAACTGGAGATCGCTCCATaGTGCCACCTCTGGGAGGAT +
Preference number: 5 (lower is better)
Translates to: SLWSGKGPNMGLLGERAELEIAP*CHLWED
Trigger: ATCCTCCCAGAGGTGGCACAATGGAGCGATCTCCAG...TTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CAA 90 bp CCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGTGGGCCACAATCTTATaGAGCCATTCAGCCTTTTCC +
Preference number: 5 (lower is better)
Translates to: PNMGLLGERAEGHRLCPWWATIL*SHSAFS
Trigger: GGAAAAGGCTGAATGGCTCAATAAGATTGTGGCCCA...CCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CAA 90 bp GGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTAGGCTCATTCACATATTTGTCCTaGGAACTCAGCCCTCGAGCA +
Preference number: 5 (lower is better)
Translates to: GERAEGHRLCPWTLALGSFTYLS*ELSPRA
Trigger: TGCTCGAGGGCTGAGTTCCAAGGACAAATATGTGAA...TGAGCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CAA 90 bp GGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTAGGCTCATCTCCCCACTGTGGGTaGAGTTCTTCATCAATGACA +
Preference number: 5 (lower is better)
Translates to: GERAEGHRLCPWTLALGSSPHCG*SSSSMT
Trigger: TGTCATTGATGAAGAACTCAACCCACAGTGGGGAGA...TGAGCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CAA 90 bp GGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTCTTTATCTGGATCCTaGTCGAACACCTCCACTTCA +
Preference number: 5 (lower is better)
Translates to: GPNMGLLGERAEGHRLCPSLSGS*SNTSTS
Trigger: TGAAGTGGAGGTGTTCGACAAGGATCCAGATAAAGA...AGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CAA 90 bp CTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGGGAATCATCCTTCACTaGCACATCGAGCTCCTGGCT +
Preference number: 5 (lower is better)
Translates to: LWSGKGPNMGLLGERAEGGIILH*HIELLA
Trigger: AGCCAGGAGCTCGATGTGCAAGTGAAGGATGATTCC...CCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CAA 90 bp GGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTCCTTGTCCAAGTCCTaGTCAAAGACTTCAACCTCT +
Preference number: 5 (lower is better)
Translates to: GPNMGLLGERAEGHRLCPSLSKS*SKTSTS
Trigger: AGAGGTTGAAGTCTTTGACAAGGACTTGGACAAGGA...AGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CAA 90 bp CTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGTTGGTGCCTCGGTTCTaGTCTGGCAGTAGCAACAGT +
Preference number: 5 (lower is better)
Translates to: LWSGKGPNMGLLGERAEGLVPRF*SGSSNS
Trigger: ACTGTTGCTACTGCCAGACAAGAACCGAGGCACCAA...CCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CAA 90 bp GGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTAGGCTCATCTTTATCTGGATCCTaGTCGAACACCTCCACTTCA +
Preference number: 5 (lower is better)
Translates to: GERAEGHRLCPWTLALGSSLSGS*SNTSTS
Trigger: TGAAGTGGAGGTGTTCGACAAGGATCCAGATAAAGA...TGAGCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CAA 90 bp AGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTAGGCTCATCACATTGAGGCGGTCCTTGTCCAAGTCCTaGTCAAAGACTTCAACCTCT +
Preference number: 5 (lower is better)
Translates to: RAQALPLDPSFRLITLRRSLSKS*SKTSTS
Trigger: AGAGGTTGAAGTCTTTGACAAGGACTTGGACAAGGA...CCGCCTCAATGTGATGAGCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CAA 90 bp CTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGGATACGGTTCTTCTCTTaGGTCAGGCAAAGGCCCGAA +
Preference number: 5 (lower is better)
Translates to: LWSGKGPNMGLLGERAEGIRFFS*VRQRPE
Trigger: TTCGGGCCTTTGCCTGACCAAAGAGAAGAACCGTAT...CCCTTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS TCA 90 bp GCAGCCATGTCTCCATTATTACTTGGCAGCCACTACCCGTGGCCTTaGACAGACAACTTTTCCCACCCCTGCACTACCCTCAGAAAGAGA +
Preference number: 5 (lower is better)
Translates to: AAMSPLLLGSHYPWP*TDNFSHPCTTLRKR
Trigger: TCTCTTTCTGAGGGTAGTGCAGGGGTGGGAAAAGTTGTCTGTTCAAGGCCACGGGTAGTGGCTGCCAAGTAATAATGGAGACATGGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551112.1
CDS TCA 90 bp GGAGGACAGGAGGGATGGGGTCTCACCGGCAACCATGAACAATGCTaGCCAGCTTTCGTTCTTCACTGTAGTACCACAGAGTCAGTTTCA +
Preference number: 5 (lower is better)
Translates to: GGQEGWGLTGNHEQC*PAFVLHCSTTESVS
Trigger: TGAAACTGACTCTGTGGTACTACAGTGAAGAACGAAAGCTGGTCAGCATTGTTCATGGTTGCCGGTGAGACCCCATCCCTCCTGTCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548142.1
CDS-3UTR CAA 90 bp ATGGAGCGAGACGAAGGCAGGAAGACAGAGCAGTCAGGCTGGGACTCGCCAGCTCCCTTGACTCCTGCTTaGCAAAAATATTTCTTCACT +
Preference number: 5 (lower is better)
Translates to: MERDEGRKTEQSGWDSPAPLTPA*QKYFFT
Trigger: AGTGAAGAAATATTTTTGCAAAGCAGGAGTCAAGGG...AGCTGGCGAGTCCCAGCCTGACTGCTCTGTCTTCCTGCCTTCGTCTCGCTCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CAA 90 bp AACATACGGTTCTTCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGCAACTGAGCCACATCTaGAAGGTCAGGCACAAGGGG +
Preference number: 5 (lower is better)
Translates to: NIRFFSLVRQRPEYGPVRQLSHI*KVRHKG
Trigger: CCCCTTGTGCCTGACCTTCAAGATGTGGCTCAGTTG...CCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGAAGAACCGTATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CAA 90 bp CAGTGGGGACAGAACTGGACATGGGGGCCTGAGCTGCTGAACATTTGCTACATGTTCACATATTTGTCCTaGGAACTCAGCCCTCGAGCA +
Preference number: 5 (lower is better)
Translates to: QWGQNWTWGPELLNICYMFTYLS*ELSPRA
Trigger: TGCTCGAGGGCTGAGTTCCAAGGACAAATATGTGAA...CATGTAGCAAATGTTCAGCAGCTCAGGCCCCCATGTCCAGTTCTGTCCCCACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394048.10
CDS-3UTR CAA 90 bp TGGGGACAGAACTGGACATGGGGGCCTGAGCTGCTGAACATTTGCTACATGCAGTCTCCCCACTGTGGGTaGAGTTCTTCATCAATGACA +
Preference number: 5 (lower is better)
Translates to: WGQNWTWGPELLNICYMQSPHCG*SSSSMT
Trigger: TGTCATTGATGAAGAACTCAACCCACAGTGGGGAGA...CTGCATGTAGCAAATGTTCAGCAGCTCAGGCCCCCATGTCCAGTTCTGTCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394048.10
CDS-3UTR CAA 90 bp TCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAGGAATCATCCTTCACTaGCACATCGAGCTCCTGGCT +
Preference number: 5 (lower is better)
Translates to: SLWSGKGPNMGLLGERAEGIILH*HIELLA
Trigger: AGCCAGGAGCTCGATGTGCAAGTGAAGGATGATTCC...TTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CAA 90 bp GGTGAAAGGGCTGAAGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTAGGCTCAAAGGAGGAATTAGACTaGACAGAGACATCCAGCTTT +
Preference number: 5 (lower is better)
Translates to: GERAEGHRLCPWTLALGSKEELD*TETSSF
Trigger: AAAGCTGGATGTCTCTGTCAAGTCTAATTCCTCCTT...TGAGCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCTTCAGCCCTTTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CAA 90 bp AGGGCACAGGCTCTGCCCTTGGACCCTAGCTTTAGGCTCATCACATTGAGGCGGAAGGAGGAATTAGACTaGACAGAGACATCCAGCTTT +
Preference number: 5 (lower is better)
Translates to: RAQALPLDPSFRLITLRRKEELD*TETSSF
Trigger: AAAGCTGGATGTCTCTGTCAAGTCTAATTCCTCCTT...CCGCCTCAATGTGATGAGCCTAAAGCTAGGGTCCAAGGGCAGAGCCTGTGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CAA 90 bp GGTTCTTCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGCTGCCCTTGTCCTTGTaGTCCATCAGGTCATACCAC +
Preference number: 5 (lower is better)
Translates to: GSSLWSGKGPNMGLLGERLPLSL*SIRSYH
Trigger: GTGGTATGACCTGATGGACAACAAGGACAAGGGCAG...CCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGAAGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CAA 90 bp GGTTCTTCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGAGTTGTACCATAGGGTaGGGTTCCTTGTTCCCCTTC +
Preference number: 5 (lower is better)
Translates to: GSSLWSGKGPNMGLLGERSCTIG*GSLFPF
Trigger: GAAGGGGAACAAGGAACCCAACCCTATGGTACAACT...CCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGAAGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CAA 90 bp TCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAAATACGGTTCTTCTCTTaGGTCAGGCAAAGGCCCGAA +
Preference number: 5 (lower is better)
Translates to: SLWSGKGPNMGLLGERAEIRFFS*VRQRPE
Trigger: TTCGGGCCTTTGCCTGACCAAAGAGAAGAACCGTAT...TTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CAA 90 bp GGTTCTTCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGATTTTCAGGACAGGGTaGAGGACAGTGGGGACAGAA +
Preference number: 5 (lower is better)
Translates to: GSSLWSGKGPNMGLLGERIFRTG*RTVGTE
Trigger: TTCTGTCCCCACTGTCCTCAACCCTGTCCTGAAAAT...CCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGAAGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394048.10
CDS GCA 90 bp AGAATGTCTGGGTACCCAAACGCACAAGTGCATATGGGTCTGACTTaGCCTCAATCAGGCCCTTCACATATTTGTCCTTGGAACTCAGCC +
Preference number: 5 (lower is better)
Translates to: RMSGYPNAQVHMGLT*PQSGPSHICPWNSA
Trigger: GGCTGAGTTCCAAGGACAAATATGTGAAGGGCCTGATTGAGGGCAAGTCAGACCCATATGCACTTGTGCGTTTGGGTACCCAGACATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS TCA 90 bp ACTGCAGAATGTCTGGGTACCCAAACGCACAAGTGCATATGGGTCTaGCTTGCCCTCAATCAGGCCCTTCACATATTTGTCCTTGGAACT +
Preference number: 5 (lower is better)
Translates to: TAECLGTQTHKCIWV*LALNQALHIFVLGT
Trigger: AGTTCCAAGGACAAATATGTGAAGGGCCTGATTGAGGGCAAGTCAGACCCATATGCACTTGTGCGTTTGGGTACCCAGACATTCTGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS TCA 90 bp GGACACATTGAAGGGGAAGCAGTAAGAGTGGTGAGTGGTATTACCTaGTGTTCAAGTCCAGCAGGATCTGCTCTTTTCTCTGACCTGGGT +
Preference number: 5 (lower is better)
Translates to: GHIEGEAVRVVSGIT*CSSPAGSALFSDLG
Trigger: ACCCAGGTCAGAGAAAAGAGCAGATCCTGCTGGACTTGAACATCAGGTAATACCACTCACCACTCTTACTGCTTCCCCTTCAATGTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550179.1
CDS CCA 90 bp ATAGCTGATGTTCAAGTCCAGCAGGATCTGCTCTTTTCTCTGACCTaGGTGAACCTTGACTCCAATGATGCGCAATGGCTTTTCACCCAG +
Preference number: 5 (lower is better)
Translates to: IADVQVQQDLLFSLT*VNLDSNDAQWLFTQ
Trigger: CTGGGTGAAAAGCCATTGCGCATCATTGGAGTCAAGGTTCACCCAGGTCAGAGAAAAGAGCAGATCCTGCTGGACTTGAACATCAGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000267113.4
ENST00000394048.10
ENST00000550986.1
CDS-3UTR CAA 90 bp AACATACGGTTCTTCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGTAGCTGCATGCCCTaGACTCCTGCTTTGCAAAAA +
Preference number: 5 (lower is better)
Translates to: NIRFFSLVRQRPEYGPVRCSCMP*TPALQK
Trigger: TTTTTGCAAAGCAGGAGTCAAGGGCATGCAGCTACA...CCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGAAGAACCGTATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS TCA 90 bp AGTTTCTCTGCATCTGACAAAAGTGACAGCCATTCTAGCCTCAAGTaGACTTGGCCTTGCCCACCTTGTAGAGGGAACCAATCATCCAGA +
Preference number: 5 (lower is better)
Translates to: SFSASDKSDSHSSLK*TWPCPPCRGNQSSR
Trigger: TCTGGATGATTGGTTCCCTCTACAAGGTGGGCAAGGCCAAGTTCACTTGAGGCTAGAATGGCTGTCACTTTTGTCAGATGCAGAGAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS-3UTR CAA 90 bp CCAGGGGCCCAGAAGGATAAAGGCCGTGCAGTAAAGGGAACATACGGTTCTTCTCCCTTGACTCCTGCTTaGCAAAAATATTTCTTCACT +
Preference number: 5 (lower is better)
Translates to: PGAQKDKGRAVKGTYGSSPLTPA*QKYFFT
Trigger: AGTGAAGAAATATTTTTGCAAAGCAGGAGTCAAGGG...AGAAGAACCGTATGTTCCCTTTACTGCACGGCCTTTATCCTTCTGGGCCCCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394048.10
CDS-3UTR CAA 90 bp AAAAGATCCTTCCAAAGCTGTATTTGGCATAAGCTAATACCACTGCTAGTGCTGCCCAAGAAACGGTCTTaGGCAATCAGGTCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: KRSFQSCIWHKLIPLLVLPKKRS*AIRSWA
Trigger: GGCCCAGGACCTGATTGCCAAAGACCGTTTCTTGGG...CAGCACTAGCAGTGGTATTAGCTTATGCCAAATACAGCTTTGGAAGGATCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394048.10
CDS CCA 90 bp TCATCCTTGTCCAAGTCCTTGTCAAAGACTTCAACCTCTAGCTCTTaGCCTGGAACTGATGTGACGATCACCTCAAAAACCTCATTCCAG +
Preference number: 5 (lower is better)
Translates to: SSLSKSLSKTSTSSS*PGTDVTITSKTSFQ
Trigger: CTGGAATGAGGTTTTTGAGGTGATCGTCACATCAGTTCCAGGCCAAGAGCTAGAGGTTGAAGTCTTTGACAAGGACTTGGACAAGGATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267113.4
ENST00000394048.10
ENST00000547667.5
CDS-3UTR CAA 90 bp TCTCTTTGGTCAGGCAAAGGCCCGAATATGGGCCTGTTAGGTGAAAGGGCTGAATGTAAATGTAAATGTTaGCAGATGGGGGTTAGATCC +
Preference number: 5 (lower is better)
Translates to: SLWSGKGPNMGLLGERAECKCKC*QMGVRS
Trigger: GGATCTAACCCCCATCTGCAAACATTTACATTTACA...TTCAGCCCTTTCACCTAACAGGCCCATATTCGGGCCTTTGCCTGACCAAAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS CCA 90 bp AATATTTCTTCACTTCCACATCAATCTGCACATCACCTACATAGCTaGGGATTGGTGAAGAAGAGAACCAAGAGAGTTAGTCCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: NISSLPHQSAHHLHS*GLVKKRTKRVSPWL
Trigger: CAGCCAAGGACTAACTCTCTTGGTTCTCTTCTTCACCAATCCCCAGCTATGTAGGTGATGTGCAGATTGATGTGGAAGTGAAGAAATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550179.1
CDS CAA 72 bp GGCTGGGGCTGGGGCCCTCTCCTGGAGATCGCTCCATaGTGCCACCTCTGGGAGGATCCGCCCGACCCAGGG +
Preference number: 6 (lower is better)
Translates to: GWGWGPLLEIAP*CHLWEDPPDPG
Trigger: CCCTGGGTCGGGCGGATCCTCCCAGAGGTGGCACAATGGAGCGATCTCCAGGAGAGGGCCCCAGCCCCAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS GCA 72 bp TGGGGCTGGGGCCCTCTCCTGGAGATCGCTCCATTGTaGCACCTCTGGGAGGATCCGCCCGACCCAGGGACT +
Preference number: 6 (lower is better)
Translates to: WGWGPLLEIAPL*HLWEDPPDPGT
Trigger: AGTCCCTGGGTCGGGCGGATCCTCCCAGAGGTGGCACAATGGAGCGATCTCCAGGAGAGGGCCCCAGCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS CCA 72 bp GGCCCTCTCCTGGAGATCGCTCCATTGTGCCACCTCTaGGAGGATCCGCCCGACCCAGGGACTGGCTGGAGG +
Preference number: 6 (lower is better)
Translates to: GPLLEIAPLCHL*EDPPDPGTGWR
Trigger: CCTCCAGCCAGTCCCTGGGTCGGGCGGATCCTCCCAGAGGTGGCACAATGGAGCGATCTCCAGGAGAGGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS TCA 72 bp ATACACAGGTATCAGCACCAGCAACCGCCTCCCGAATaGAGTCAGCACCGCCAGGGCCTCACCCGCCGCGCC +
Preference number: 6 (lower is better)
Translates to: IHRYQHQQPPPE*SQHRQGLTRRA
Trigger: GGCGCGGCGGGTGAGGCCCTGGCGGTGCTGACTTCATTCGGGAGGCGGTTGCTGGTGCTGATACCTGTGTAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS GCA 72 bp GAGTCGTGTGACAGGGTCGAGGTGGGGCATCCACACTaGTGCCTCTCTGGGGATTCTCACTGTCCACGTCCC +
Preference number: 6 (lower is better)
Translates to: ESCDRVEVGHPH*CLSGDSHCPRP
Trigger: GGGACGTGGACAGTGAGAATCCCCAGAGAGGCAGCAGTGTGGATGCCCCACCTCGACCCTGTCACACGACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS CCA 72 bp GGTGAGACGCTCCAGGCGCAAGTGCAGGCGGCCAGATaGGACATCCTCCAGGGTCAGCCACTCATCAAGGAA +
Preference number: 6 (lower is better)
Translates to: GETLQAQVQAAR*DILQGQPLIKE
Trigger: TTCCTTGATGAGTGGCTGACCCTGGAGGATGTCCCATCTGGCCGCCTGCACTTGCGCCTGGAGCGTCTCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267113.4
ENST00000394048.10
ENST00000547667.5
ENST00000550878.5
CDS CCA 72 bp TTCGCAGCGGGAGGTCCTCTGCCCGCTCCATATAGATaGATAGCAGGGCCGCAGCCAGCTCCGCACTCTTCT +
Preference number: 6 (lower is better)
Translates to: FAAGGPLPAPYR*IAGPQPAPHSS
Trigger: AGAAGAGTGCGGAGCTGGCTGCGGCCCTGCTATCCATCTATATGGAGCGGGCAGAGGACCTCCCGCTGCGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267113.4
ENST00000394048.10
ENST00000550878.5
CDS CCA 72 bp GAGCGAGACGAAGGCAGGAAGACAGAGCAGTCAGGCTaGGACTCGCCAGCTCCTAGGAGCTGCCCTTGTCCT +
Preference number: 6 (lower is better)
Translates to: ERDEGRKTEQSG*DSPAPRSCPCP
Trigger: AGGACAAGGGCAGCTCCTAGGAGCTGGCGAGTCCCAGCCTGACTGCTCTGTCTTCCTGCCTTCGTCTCGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267113.4
ENST00000394048.10
ENST00000550515.1
CDS TCA 72 bp GGTAGAGGGCGAGGCCGAAGAGCACGAAACCCACGCTaGGTCCCACTGCCCCGGCCAAATACACAGGTATCA +
Preference number: 6 (lower is better)
Translates to: GRGRGRRARNPR*VPLPRPNTQVS
Trigger: TGATACCTGTGTATTTGGCCGGGGCAGTGGGACTCAGCGTGGGTTTCGTGCTCTTCGGCCTCGCCCTCTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS TCA 72 bp GGGAAGCTGACCTGGAGGTGGGGAAGGCAGAGACAGTaGCGTGCAGCACACCCTCGCCTCTGGTTTCCTACT +
Preference number: 6 (lower is better)
Translates to: GKLTWRWGRQRQ*RAAHPRLWFPT
Trigger: AGTAGGAAACCAGAGGCGAGGGTGTGCTGCACGTCACTGTCTCTGCCTTCCCCACCTCCAGGTCAGCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550986.1
CDS GCA 72 bp TCGTGTGACAGGGTCGAGGTGGGGCATCCACACTGCTaGCTCTCTGGGGATTCTCACTGTCCACGTCCCAAG +
Preference number: 6 (lower is better)
Translates to: SCDRVEVGHPHC*LSGDSHCPRPK
Trigger: CTTGGGACGTGGACAGTGAGAATCCCCAGAGAGGCAGCAGTGTGGATGCCCCACCTCGACCCTGTCACACGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS CCA 72 bp AGGAGAGGGAGTGTGTGTGACTCCTCACACTCAGGGTaGGCGAGGGGCGAGGATGCCCCAAAGGTTCATTCC +
Preference number: 6 (lower is better)
Translates to: RRGSVCDSSHSG*ARGEDAPKVHS
Trigger: GGAATGAACCTTTGGGGCATCCTCGCCCCTCGCCCACCCTGAGTGTGAGGAGTCACACACACTCCCTCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550986.1
CDS GCA 72 bp GAGGCCGAAGAGCACGAAACCCACGCTGAGTCCCACTaGCCCGGCCAAATACACAGGTATCAGCACCAGCAA +
Preference number: 6 (lower is better)
Translates to: EAEEHETHAESH*PGQIHRYQHQQ
Trigger: TTGCTGGTGCTGATACCTGTGTATTTGGCCGGGGCAGTGGGACTCAGCGTGGGTTTCGTGCTCTTCGGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS GCA 72 bp GTTTTCGCAGTGAGCTGCTCCTCGTCGTCCAGTAGCTaGCTCGCTGCTCGAAGGCTCCGTTCTTTCTCGTCG +
Preference number: 6 (lower is better)
Translates to: VFAVSCSSSSSS*LAARRLRSFSS
Trigger: CGACGAGAAAGAACGGAGCCTTCGAGCAGCGAGGCAGCTACTGGACGACGAGGAGCAGCTCACTGCGAAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267113.4
ENST00000394048.10
ENST00000551790.5
CDS GCA 72 bp GAGCAGTCAGGCTGGGACTCGCCAGCTCCTAGGAGCTaGCCTTGTCCTTGTTGTCCATCAGGTCATACCACC +
Preference number: 6 (lower is better)
Translates to: EQSGWDSPAPRS*PCPCCPSGHTT
Trigger: GGTGGTATGACCTGATGGACAACAAGGACAAGGGCAGCTCCTAGGAGCTGGCGAGTCCCAGCCTGACTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267113.4
ENST00000394048.10
ENST00000550515.1
CDS TCA 72 bp ACATGCTCAGTCCCAAACTGGCTATCAGGAGTCGTGTaGCAGGGTCGAGGTGGGGCATCCACACTGCTGCCT +
Preference number: 6 (lower is better)
Translates to: TCSVPNWLSGVV*QGRGGASTLLP
Trigger: AGGCAGCAGTGTGGATGCCCCACCTCGACCCTGTCACACGACTCCTGATAGCCAGTTTGGGACTGAGCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS GCA 72 bp GTGCAGCACACCCTCGCCTCTGGTTTCCTACTAAGATaGTGGTGGTGTGCCACAGAGGAGAGGGAGTGTGTG +
Preference number: 6 (lower is better)
Translates to: VQHTLASGFLLR*WWCATEERECV
Trigger: CACACACTCCCTCTCCTCTGTGGCACACCACCAGCATCTTAGTAGGAAACCAGAGGCGAGGGTGTGCTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550986.1
CDS CCA 72 bp GAAGATCCTGGGCCCGATCCAGGTAGACAACTAAGATaGCAGCTGACGGGGGATCTGGTCGAGAGGAGACTC +
Preference number: 6 (lower is better)
Translates to: EDPGPDPGRQLR*QLTGDLVERRL
Trigger: GAGTCTCCTCTCGACCAGATCCCCCGTCAGCTGCCATCTTAGTTGTCTACCTGGATCGGGCCCAGGATCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS TCA 72 bp ATGGATAGCAGGGCCGCAGCCAGCTCCGCACTCTTCTaGGTCTGGATCAAACTATTCACCTGCAGCACCTCC +
Preference number: 6 (lower is better)
Translates to: MDSRAAASSALF*VWIKLFTCSTS
Trigger: GGAGGTGCTGCAGGTGAATAGTTTGATCCAGACTCAGAAGAGTGCGGAGCTGGCTGCGGCCCTGCTATCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267113.4
ENST00000394048.10
ENST00000550878.5
CDS CCA 72 bp TTGTTGTCCATCAGGTCATACCACCGGGCTACACCCTaGGAAAGGTCTGTCTCAGCTAGGTCCAGCTGCACC +
Preference number: 6 (lower is better)
Translates to: LLSIRSYHRATP*ERSVSARSSCT
Trigger: GGTGCAGCTGGACCTAGCTGAGACAGACCTTTCCCAGGGTGTAGCCCGGTGGTATGACCTGATGGACAACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267113.4
ENST00000394048.10
ENST00000550515.1
CDS CCA 72 bp GGAGCCACAGTTTCAGCCAGAAGCTTCTCCATATACTaGCCCAGGAAGGGCCAGACCTGGGCCACAATCTTA +
Preference number: 6 (lower is better)
Translates to: GATVSARSFSIY*PRKGQTWATIL
Trigger: TAAGATTGTGGCCCAGGTCTGGCCCTTCCTGGGCCAGTATATGGAGAAGCTTCTGGCTGAAACTGTGGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267113.4
ENST00000394048.10
ENST00000550986.1
ENST00000551790.5
CDS CCA 72 bp GGAAGAACCGGAACGCTTCCTCCCACACTGGGCAGTTaGTACTGTAGACAGCCTTGCTCTCCTGAGTCACAT +
Preference number: 6 (lower is better)
Translates to: GRTGTLPPTLGS*YCRQPCSPESH
Trigger: ATGTGACTCAGGAGAGCAAGGCTGTCTACAGTACCAACTGCCCAGTGTGGGAGGAAGCGTTCCGGTTCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS CCA 72 bp GACTCAGGGTCCTCTTCTTCTGTGAGGTCCTCCTCTTaGTGCCTCGGTTCTTGTCTGGCAGTAGCAACAGTG +
Preference number: 6 (lower is better)
Translates to: DSGSSSSVRSSS*CLGSCLAVATV
Trigger: CACTGTTGCTACTGCCAGACAAGAACCGAGGCACCAAGAGGAGGACCTCACAGAAGAAGAGGACCCTGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS TCA 72 bp GTAGCTCTCGATGACTCATATAGAGAGTTTTCGCAGTaGGCTGCTCCTCGTCGTCCAGTAGCTGCCTCGCTG +
Preference number: 6 (lower is better)
Translates to: VALDDSYREFSQ*AAPRRPVAASL
Trigger: CAGCGAGGCAGCTACTGGACGACGAGGAGCAGCTCACTGCGAAAACTCTCTATATGAGTCATCGAGAGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267113.4
ENST00000394048.10
ENST00000551790.5
CDS GCA 72 bp TCAGGGTCCTCTTCTTCTGTGAGGTCCTCCTCTTGGTaGCTCGGTTCTTGTCTGGCAGTAGCAACAGTGACA +
Preference number: 6 (lower is better)
Translates to: SGSSSSVRSSSW*LGSCLAVATVT
Trigger: TGTCACTGTTGCTACTGCCAGACAAGAACCGAGGCACCAAGAGGAGGACCTCACAGAAGAAGAGGACCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS CAA 90 bp GGAACTGATGTGACGATCACCTCAAAAACCTCATTCCAGCGGGGATaGAGATCTTCCCGAACAACATGGCTCCGGAAGCTTCGTCCTGCC +
Preference number: 6 (lower is better)
Translates to: GTDVTITSKTSFQRG*RSSRTTWLRKLRPA
Trigger: GGCAGGACGAAGCTTCCGGAGCCATGTTGTTCGGGAAGATCTCAATCCCCGCTGGAATGAGGTTTTTGAGGTGATCGTCACATCAGTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267113.4
ENST00000394048.10
ENST00000547667.5
CDS TCA 72 bp GAATCATCCTTCACTTGCACATCGAGCTCCTGGCTTTaGGGGTCTTGTAGGAAGAACCGGAACGCTTCCTCC +
Preference number: 6 (lower is better)
Translates to: ESSFTCTSSSWL*GSCRKNRNASS
Trigger: GGAGGAAGCGTTCCGGTTCTTCCTACAAGACCCTCAAAGCCAGGAGCTCGATGTGCAAGTGAAGGATGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS TCA 72 bp GAGGGATGGGGTCTCACCGGCAACCATGAACAATGCTaGCCAGCTTTCGTTCTTCACTGTAGTACCACAGAG +
Preference number: 6 (lower is better)
Translates to: EGWGLTGNHEQC*PAFVLHCSTTE
Trigger: CTCTGTGGTACTACAGTGAAGAACGAAAGCTGGTCAGCATTGTTCATGGTTGCCGGTGAGACCCCATCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548142.1
CDS CCA 72 bp ATCCTTGTCGAACACCTCCACTTCAATCTCCTGCCCTaGGACCTCGTGTACCATCACCTCATAAGTCTCTCC +
Preference number: 6 (lower is better)
Translates to: ILVEHLHFNLLP*DLVYHHLISLS
Trigger: GGAGAGACTTATGAGGTGATGGTACACGAGGTCCCAGGGCAGGAGATTGAAGTGGAGGTGTTCGACAAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS CCA 72 bp TGTCCACGTCCCAAGCACCAGGACAACCAGGCACCGTaGGGAAGCATATTTCTGATGAATCCAAGTACAGGA +
Preference number: 6 (lower is better)
Translates to: CPRPKHQDNQAP*GSIFLMNPSTG
Trigger: TCCTGTACTTGGATTCATCAGAAATATGCTTCCCCACGGTGCCTGGTTGTCCTGGTGCTTGGGACGTGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS CCA 72 bp CGGTCTTTGGCAATCAGGTCCTGGGCCTCTAATACATaGATCCGAAGCACATGCTCAGTCCCAAACTGGCTA +
Preference number: 6 (lower is better)
Translates to: RSLAIRSWASNT*IRSTCSVPNWL
Trigger: TAGCCAGTTTGGGACTGAGCATGTGCTTCGGATCCATGTATTAGAGGCCCAGGACCTGATTGCCAAAGACCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267113.4
ENST00000394048.10
ENST00000547667.5
CDS CCA 72 bp CACAATCTTATTGAGCCATTCAGCCTTTTCCACGTCTaGGAAGCTGACCTGGAGGTGGGGAAGGCAGAGACA +
Preference number: 6 (lower is better)
Translates to: HNLIEPFSLFHV*EADLEVGKAET
Trigger: TGTCTCTGCCTTCCCCACCTCCAGGTCAGCTTCCCAGACGTGGAAAAGGCTGAATGGCTCAATAAGATTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550986.1
CDS CAA 90 bp AGCAGCCATGTCTCCATTATTACTTGGCAGCCACTACCCGTGGCCTaGAACAGACAACTTTTCCCACCCCTGCACTACCCTCAGAAAGAG +
Preference number: 6 (lower is better)
Translates to: SSHVSIITWQPLPVA*NRQLFPPLHYPQKE
Trigger: CTCTTTCTGAGGGTAGTGCAGGGGTGGGAAAAGTTGTCTGTTCAAGGCCACGGGTAGTGGCTGCCAAGTAATAATGGAGACATGGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551112.1
CDS CCA 72 bp TCATTCCAGCGGGGATTGAGATCTTCCCGAACAACATaGCTCCGGAAGCTTCGTCCTGCCAACTTTAGTTTG +
Preference number: 6 (lower is better)
Translates to: SFQRGLRSSRTT*LRKLRPANFSL
Trigger: CAAACTAAAGTTGGCAGGACGAAGCTTCCGGAGCCATGTTGTTCGGGAAGATCTCAATCCCCGCTGGAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267113.4
ENST00000394048.10
ENST00000547667.5
CDS CAA 72 bp GTGACGATCACCTCAAAAACCTCATTCCAGCGGGGATaGAGATCTTCCCGAACAACATGGCTCCGGAAGCTT +
Preference number: 6 (lower is better)
Translates to: VTITSKTSFQRG*RSSRTTWLRKL
Trigger: AAGCTTCCGGAGCCATGTTGTTCGGGAAGATCTCAATCCCCGCTGGAATGAGGTTTTTGAGGTGATCGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000267113.4
ENST00000394048.10
ENST00000547667.5
CDS CAA 90 bp CAGAATGTCTGGGTACCCAAACGCACAAGTGCATATGGGTCTGACTaGCCCTCAATCAGGCCCTTCACATATTTGTCCTTGGAACTCAGC +
Preference number: 6 (lower is better)
Translates to: QNVWVPKRTSAYGSD*PSIRPFTYLSLELS
Trigger: GCTGAGTTCCAAGGACAAATATGTGAAGGGCCTGATTGAGGGCAAGTCAGACCCATATGCACTTGTGCGTTTGGGTACCCAGACATTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS TCA 72 bp TGTCTGGGTACCCAAACGCACAAGTGCATATGGGTCTaGCTTGCCCTCAATCAGGCCCTTCACATATTTGTC +
Preference number: 6 (lower is better)
Translates to: CLGTQTHKCIWV*LALNQALHIFV
Trigger: GACAAATATGTGAAGGGCCTGATTGAGGGCAAGTCAGACCCATATGCACTTGTGCGTTTGGGTACCCAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS TCA 72 bp GCATCTGACAAAAGTGACAGCCATTCTAGCCTCAAGTaGACTTGGCCTTGCCCACCTTGTAGAGGGAACCAA +
Preference number: 6 (lower is better)
Translates to: ASDKSDSHSSLK*TWPCPPCRGNQ
Trigger: TTGGTTCCCTCTACAAGGTGGGCAAGGCCAAGTTCACTTGAGGCTAGAATGGCTGTCACTTTTGTCAGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS TCA 72 bp CATTCTGTCGAAGGGACCGGCAACCATGAACAATGCTaGCCAGCTTTCGTTCTTCACTGTAGTACCACAGAG +
Preference number: 6 (lower is better)
Translates to: HSVEGTGNHEQC*PAFVLHCSTTE
Trigger: CTCTGTGGTACTACAGTGAAGAACGAAAGCTGGTCAGCATTGTTCATGGTTGCCGGTCCCTTCGACAGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS CCA 72 bp CCCAGTTCCACTCGTGTAAATGTAAATGTTTGCAGATaGGGGTTAGATCCCCTAACAGCCGGAGCCACAGTT +
Preference number: 6 (lower is better)
Translates to: PSSTRVNVNVCR*GLDPLTAGATV
Trigger: AACTGTGGCTCCGGCTGTTAGGGGATCTAACCCCCATCTGCAAACATTTACATTTACACGAGTGGAACTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000267113.4
ENST00000394048.10
ENST00000550986.1
ENST00000551790.5
CDS CCA 72 bp GTTCAAGTCCAGCAGGATCTGCTCTTTTCTCTGACCTaGGTGAACCTTGACTCCAATGATGCGCAATGGCTT +
Preference number: 6 (lower is better)
Translates to: VQVQQDLLFSLT*VNLDSNDAQWL
Trigger: AAGCCATTGCGCATCATTGGAGTCAAGGTTCACCCAGGTCAGAGAAAAGAGCAGATCCTGCTGGACTTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267113.4
ENST00000394048.10
ENST00000550179.1
ENST00000550986.1
CDS CCA 72 bp ATATCCACAGCCAGCAGCCATGTCTCCATTATTACTTaGCAGCCACTACCCGTGGCCTTGAACAGACAACTT +
Preference number: 6 (lower is better)
Translates to: ISTASSHVSIIT*QPLPVALNRQL
Trigger: AAGTTGTCTGTTCAAGGCCACGGGTAGTGGCTGCCAAGTAATAATGGAGACATGGCTGCTGGCTGTGGATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551112.1
CDS CAA 72 bp TGGGTACCCAAACGCACAAGTGCATATGGGTCTGACTaGCCCTCAATCAGGCCCTTCACATATTTGTCCTTG +
Preference number: 6 (lower is better)
Translates to: WVPKRTSAYGSD*PSIRPFTYLSL
Trigger: CAAGGACAAATATGTGAAGGGCCTGATTGAGGGCAAGTCAGACCCATATGCACTTGTGCGTTTGGGTACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS CAA 72 bp TATATCCACAGCCAGCAGCCATGTCTCCATTATTACTaGGCAGCCACTACCCGTGGCCTTGAACAGACAACT +
Preference number: 6 (lower is better)
Translates to: YIHSQQPCLHYY*AATTRGLEQTT
Trigger: AGTTGTCTGTTCAAGGCCACGGGTAGTGGCTGCCAAGTAATAATGGAGACATGGCTGCTGGCTGTGGATATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551112.1
CDS CAA 90 bp CTCACAAATTATATCCACAGCCAGCAGCCATGTCTCCATTATTACTaGGCAGCCACTACCCGTGGCCTTGAACAGACAACTTTTCCCACC +
Preference number: 6 (lower is better)
Translates to: LTNYIHSQQPCLHYY*AATTRGLEQTTFPT
Trigger: GGTGGGAAAAGTTGTCTGTTCAAGGCCACGGGTAGTGGCTGCCAAGTAATAATGGAGACATGGCTGCTGGCTGTGGATATAATTTGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551112.1
CDS CCA 72 bp CTCGTGTACCATCACCTCATAAGTCTCTCCCCACTGTaGGTTGAGTTCTTCATCAATGACACGACTGCAGAA +
Preference number: 6 (lower is better)
Translates to: LVYHHLISLSPL*VEFFINDTTAE
Trigger: TTCTGCAGTCGTGTCATTGATGAAGAACTCAACCCACAGTGGGGAGAGACTTATGAGGTGATGGTACACGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000267113.4
ENST00000394048.10
CDS TCA 72 bp GAAGGGGAAGCAGTAAGAGTGGTGAGTGGTATTACCTaGTGTTCAAGTCCAGCAGGATCTGCTCTTTTCTCT +
Preference number: 6 (lower is better)
Translates to: EGEAVRVVSGIT*CSSPAGSALFS
Trigger: AGAGAAAAGAGCAGATCCTGCTGGACTTGAACATCAGGTAATACCACTCACCACTCTTACTGCTTCCCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550179.1
CDS CCA 72 bp TCCAAGTCCTTGTCAAAGACTTCAACCTCTAGCTCTTaGCCTGGAACTGATGTGACGATCACCTCAAAAACC +
Preference number: 6 (lower is better)
Translates to: SKSLSKTSTSSS*PGTDVTITSKT
Trigger: GGTTTTTGAGGTGATCGTCACATCAGTTCCAGGCCAAGAGCTAGAGGTTGAAGTCTTTGACAAGGACTTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267113.4
ENST00000394048.10
ENST00000547667.5
CDS CAA 72 bp CCACATCAATCTGCACATCACCTACATAGCTGGGGATaGGTGAAGAAGAGAACCAAGAGAGTTAGTCCTTGG +
Preference number: 6 (lower is better)
Translates to: PHQSAHHLHSWG*VKKRTKRVSPW
Trigger: CCAAGGACTAACTCTCTTGGTTCTCTTCTTCACCAATCCCCAGCTATGTAGGTGATGTGCAGATTGATGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550179.1
CDS CAA 90 bp TCTTCACTTCCACATCAATCTGCACATCACCTACATAGCTGGGGATaGGTGAAGAAGAGAACCAAGAGAGTTAGTCCTTGGCTGAAGTTG +
Preference number: 6 (lower is better)
Translates to: SSLPHQSAHHLHSWG*VKKRTKRVSPWLKL
Trigger: CAACTTCAGCCAAGGACTAACTCTCTTGGTTCTCTTCTTCACCAATCCCCAGCTATGTAGGTGATGTGCAGATTGATGTGGAAGTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550179.1
CDS CCA 72 bp TCACTTCCACATCAATCTGCACATCACCTACATAGCTaGGGATTGGTGAAGAAGAGAACCAAGAGAGTTAGT +
Preference number: 6 (lower is better)
Translates to: SLPHQSAHHLHS*GLVKKRTKRVS
Trigger: ACTAACTCTCTTGGTTCTCTTCTTCACCAATCCCCAGCTATGTAGGTGATGTGCAGATTGATGTGGAAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550179.1