Pregenerated sensors for ESX1 (Homo sapiens)
Ensembl gene IDs: ENSG00000123576Ensembl transcript IDs: ENST00000372588.4
Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CAA 90 bp | TTTGTTCACCTACCCACTTCATTTAACAAGCATCTAACGAATTACTaGATGCTGTGCTGTGCACAATTTCTATCTGGCAGGAAAGAACTT | + |
Preference number: 2 (lower is better) Translates to: FVHLPTSFNKHLTNY*MLCCAQFLSGRKEL Trigger: AAGTTCTTTCCTGCCAGATAGAAATTGTGCACAGCACAGCATCAAGTAATTCGTTAGATGCTTGTTAAATGAAGTGGGTAGGTGAACAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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3UTR-3UTR CAA 90 bp | TACAATTATGTGGCCTACAAAAATAACAGGGCATTCGTTAACTTTGTTCACCTACATCTAACGAATTACTaGATGCTGTGCTGTGCACAA | + |
Preference number: 3 (lower is better) Translates to: YNYVAYKNNRAFVNFVHLHLTNY*MLCCAQ Trigger: TTGTGCACAGCACAGCATCAAGTAATTCGTTAGATG...TAGGTGAACAAAGTTAACGAATGCCCTGTTATTTTTGTAGGCCACATAATTGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS-3UTR TCA 90 bp | AACAGGGCATTCGTTAACTTTGTTCACCTACCCACTTCATTTAACAAGCATCTAGCAGCTGAAACTGCGTaGACGCGGTGCGGCGGCGGC | + |
Preference number: 4 (lower is better) Translates to: NRAFVNFVHLPTSFNKHLAAETA*TRCGGG Trigger: GCCGCCGCCGCACCGCGTTCACGCAGTTTCAGCTGC...TAGATGCTTGTTAAATGAAGTGGGTAGGTGAACAAAGTTAACGAATGCCCTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS-3UTR CCA 90 bp | ATAACAGGGCATTCGTTAACTTTGTTCACCTACCCACTTCATTTAACAAGCATCTGTTGCTCCGGCTCGTaGCCGCCGCCACCCTCACGG | + |
Preference number: 4 (lower is better) Translates to: ITGHSLTLFTYPLHLTSICCSGS*PPPPSR Trigger: CCGTGAGGGTGGCGGCGGCCACGAGCCGGAGCAACA...GATGCTTGTTAAATGAAGTGGGTAGGTGAACAAAGTTAACGAATGCCCTGTTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS-3UTR CCA 90 bp | TACAATTATGTGGCCTACAAAAATAACAGGGCATTCGTTAACTTTGTTCACCTACCCCTCCGCCGGCTGTaGCCCCTCCACGGTCGTCTG | + |
Preference number: 4 (lower is better) Translates to: YNYVAYKNNRAFVNFVHLPLRRL*PLHGRL Trigger: CAGACGACCGTGGAGGGGCCACAGCCGGCGGAGGGG...TAGGTGAACAAAGTTAACGAATGCCCTGTTATTTTTGTAGGCCACATAATTGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS-3UTR GCA 90 bp | TTCGTTAACTTTGTTCACCTACCCACTTCATTTAACAAGCATCTAACGAATTACGGCTCCTCCTGCTGTTaGTCCGGCTCGTGGCCGCCG | + |
Preference number: 4 (lower is better) Translates to: FVNFVHLPTSFNKHLTNYGSSCC*SGSWPP Trigger: CGGCGGCCACGAGCCGGAGCAACAGCAGGAGGAGCC...GTAATTCGTTAGATGCTTGTTAAATGAAGTGGGTAGGTGAACAAAGTTAACGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS-3UTR GCA 90 bp | ATAACAGGGCATTCGTTAACTTTGTTCACCTACCCACTTCATTTAACAAGCATCGGCTCCTCCTGCTGTTaGTCCGGCTTGGTCAGGGGC | + |
Preference number: 4 (lower is better) Translates to: ITGHSLTLFTYPLHLTSIGSSCC*SGLVRG Trigger: GCCCCTGACCAAGCCGGAGCAACAGCAGGAGGAGCC...GATGCTTGTTAAATGAAGTGGGTAGGTGAACAAAGTTAACGAATGCCCTGTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS-3UTR CCA 90 bp | AATTATGTGGCCTACAAAAATAACAGGGCATTCGTTAACTTTGTTCACCTACCCTGCAGACTCTGTGCGTaGTTCCGCGGCGATCCCGGG | + |
Preference number: 4 (lower is better) Translates to: NYVAYKNNRAFVNFVHLPCRLCA*FRGDPG Trigger: CCCGGGATCGCCGCGGAACCACGCACAGAGTCTGCA...GGGTAGGTGAACAAAGTTAACGAATGCCCTGTTATTTTTGTAGGCCACATAATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS-3UTR CCA 90 bp | AATTATGTGGCCTACAAAAATAACAGGGCATTCGTTAACTTTGTTCACCTACCCCCACCCTCACGGTCTTaGTCGTCCGAGGGGACGGAC | + |
Preference number: 4 (lower is better) Translates to: NYVAYKNNRAFVNFVHLPPPSRS*SSEGTD Trigger: GTCCGTCCCCTCGGACGACCAAGACCGTGAGGGTGG...GGGTAGGTGAACAAAGTTAACGAATGCCCTGTTATTTTTGTAGGCCACATAATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS-3UTR CCA 90 bp | TATGTGGCCTACAAAAATAACAGGGCATTCGTTAACTTTGTTCACCTACCCACTCATGGGTGGCCTGGGTaGCATAGGTGGCACAGGCAG | + |
Preference number: 4 (lower is better) Translates to: YVAYKNNRAFVNFVHLPTHGWPG*HRWHRQ Trigger: CTGCCTGTGCCACCTATGCCACCCAGGCCACCCATG...AGTGGGTAGGTGAACAAAGTTAACGAATGCCCTGTTATTTTTGTAGGCCACATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS-3UTR GCA 90 bp | TATGTGGCCTACAAAAATAACAGGGCATTCGTTAACTTTGTTCACCTACCCACTCTTCTGCAGACTCTGTaGGTGGTTCCGCGGCGATCC | + |
Preference number: 4 (lower is better) Translates to: YVAYKNNRAFVNFVHLPTLLQTL*VVPRRS Trigger: GGATCGCCGCGGAACCACGCACAGAGTCTGCAGAAG...AGTGGGTAGGTGAACAAAGTTAACGAATGCCCTGTTATTTTTGTAGGCCACATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS-3UTR GCA 90 bp | AATTATGTGGCCTACAAAAATAACAGGGCATTCGTTAACTTTGTTCACCTACCCGGCTCCTCCTGCTCTTaGTTCAGCTCGAGCAGGGGC | + |
Preference number: 4 (lower is better) Translates to: NYVAYKNNRAFVNFVHLPGSSCS*FSSSRG Trigger: GCCCCTGCTCGAGCTGAAGCAAGAGCAGGAGGAGCC...GGGTAGGTGAACAAAGTTAACGAATGCCCTGTTATTTTTGTAGGCCACATAATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS-3UTR CCA 90 bp | AAAAATAACAGGGCATTCGTTAACTTTGTTCACCTACCCACTTCATTTAACAAGCCCTCCACGGTCGTCTaGGGCGGCTCCTCCTGCTCT | + |
Preference number: 4 (lower is better) Translates to: KNNRAFVNFVHLPTSFNKPSTVV*GGSSCS Trigger: AGAGCAGGAGGAGCCGCCCCAGACGACCGTGGAGGG...CTTGTTAAATGAAGTGGGTAGGTGAACAAAGTTAACGAATGCCCTGTTATTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS-3UTR CCA 90 bp | ATAACAGGGCATTCGTTAACTTTGTTCACCTACCCACTTCATTTAACAAGCATCGAGGCACATGTGACCTaGGTGGCAGAGGCGCCATGG | + |
Preference number: 4 (lower is better) Translates to: ITGHSLTLFTYPLHLTSIEAHVT*VAEAPW Trigger: CCATGGCGCCTCTGCCACCCAGGTCACATGTGCCTC...GATGCTTGTTAAATGAAGTGGGTAGGTGAACAAAGTTAACGAATGCCCTGTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS-3UTR GCA 90 bp | ATAACAGGGCATTCGTTAACTTTGTTCACCTACCCACTTCATTTAACAAGCATCCATGGGTGGCATAGGTaGTATGGGTGGCCTGGGTGG | + |
Preference number: 4 (lower is better) Translates to: ITGHSLTLFTYPLHLTSIHGWHR*YGWPGW Trigger: CCACCCAGGCCACCCATAGCACCTATGCCACCCATG...GATGCTTGTTAAATGAAGTGGGTAGGTGAACAAAGTTAACGAATGCCCTGTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS-3UTR CCA 90 bp | TTCGTTAACTTTGTTCACCTACCCACTTCATTTAACAAGCATCTAACGAATTACGCTGTTGCTCCGGCTTaGTCAGGGGCGGCTCCTCCT | + |
Preference number: 4 (lower is better) Translates to: FVNFVHLPTSFNKHLTNYAVAPA*SGAAPP Trigger: AGGAGGAGCCGCCCCTGACCAAGCCGGAGCAACAGC...GTAATTCGTTAGATGCTTGTTAAATGAAGTGGGTAGGTGAACAAAGTTAACGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS-3UTR CCA 90 bp | CCTACAAAAATAACAGGGCATTCGTTAACTTTGTTCACCTACCCACTTCATTTACCTCTCTGGGGGCTGTaGTCCCTCAGCGGTTTGTGG | + |
Preference number: 4 (lower is better) Translates to: PTKITGHSLTLFTYPLHLPLWGL*SLSGLW Trigger: CCACAAACCGCTGAGGGACCACAGCCCCCAGAGAGG...TAAATGAAGTGGGTAGGTGAACAAAGTTAACGAATGCCCTGTTATTTTTGTAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS-3UTR CCA 90 bp | ACAAAAATAACAGGGCATTCGTTAACTTTGTTCACCTACCCACTTCATTTAACAGCGGCGTTTCCTCTCTaGGGGCTGTGGTCCCTCAGC | + |
Preference number: 4 (lower is better) Translates to: TKITGHSLTLFTYPLHLTAAFPL*GLWSLS Trigger: GCTGAGGGACCACAGCCCCCAGAGAGGAAACGCCGC...TGTTAAATGAAGTGGGTAGGTGAACAAAGTTAACGAATGCCCTGTTATTTTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS-3UTR TCA 90 bp | AATTATGTGGCCTACAAAAATAACAGGGCATTCGTTAACTTTGTTCACCTACCCTCTAGCTCCTGCAGCTaGAACTGCGTGAACGCGGTG | + |
Preference number: 4 (lower is better) Translates to: NYVAYKNNRAFVNFVHLPSSSCS*NCVNAV Trigger: CACCGCGTTCACGCAGTTTCAGCTGCAGGAGCTAGA...GGGTAGGTGAACAAAGTTAACGAATGCCCTGTTATTTTTGTAGGCCACATAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS-3UTR TCA 90 bp | AAAAATAACAGGGCATTCGTTAACTTTGTTCACCTACCCACTTCATTTAACAAGGGAGCCAGGCCAGTGTaGGGCACATGTGACCTGGGT | + |
Preference number: 4 (lower is better) Translates to: KNNRAFVNFVHLPTSFNKGARPV*GTCDLG Trigger: ACCCAGGTCACATGTGCCTCACACTGGCCTGGCTCC...CTTGTTAAATGAAGTGGGTAGGTGAACAAAGTTAACGAATGCCCTGTTATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS-3UTR GCA 90 bp | TATGTGGCCTACAAAAATAACAGGGCATTCGTTAACTTTGTTCACCTACCCACTGGACGGACCCTTCCGTaGCAACGTTGTTTTCCGCTT | + |
Preference number: 4 (lower is better) Translates to: YVAYKNNRAFVNFVHLPTGRTLP*QRCFPL Trigger: AAGCGGAAAACAACGTTGGCACGGAAGGGTCCGTCC...AGTGGGTAGGTGAACAAAGTTAACGAATGCCCTGTTATTTTTGTAGGCCACATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS-3UTR CCA 90 bp | TACAATTATGTGGCCTACAAAAATAACAGGGCATTCGTTAACTTTGTTCACCTACCTGGGTGGCATAGGTaGCACAGGCAGCACAGGTGG | + |
Preference number: 4 (lower is better) Translates to: YNYVAYKNNRAFVNFVHLPGWHR*HRQHRW Trigger: CCACCTGTGCTGCCTGTGCCACCTATGCCACCCAGG...TAGGTGAACAAAGTTAACGAATGCCCTGTTATTTTTGTAGGCCACATAATTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS-3UTR CCA 90 bp | CCTACAAAAATAACAGGGCATTCGTTAACTTTGTTCACCTACCCACTTCATTTACATAGGGACCATGGGTaGCCTGGGTGGCATAGGTGG | + |
Preference number: 4 (lower is better) Translates to: PTKITGHSLTLFTYPLHLHRDHG*PGWHRW Trigger: CCACCTATGCCACCCAGGCCACCCATGGTCCCTATG...TAAATGAAGTGGGTAGGTGAACAAAGTTAACGAATGCCCTGTTATTTTTGTAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS-3UTR CCA 90 bp | AATTATGTGGCCTACAAAAATAACAGGGCATTCGTTAACTTTGTTCACCTACCCCATAGGTGCTATGGGTaGCCTGGGTGGCATAGGGAC | + |
Preference number: 4 (lower is better) Translates to: NYVAYKNNRAFVNFVHLPHRCYG*PGWHRD Trigger: GTCCCTATGCCACCCAGGCCACCCATAGCACCTATG...GGGTAGGTGAACAAAGTTAACGAATGCCCTGTTATTTTTGTAGGCCACATAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS-3UTR GCA 90 bp | CCTACAAAAATAACAGGGCATTCGTTAACTTTGTTCACCTACCCACTTCATTTACGCCGACTGCCAGGCTaGGGTAGCCAATATCACTGT | + |
Preference number: 4 (lower is better) Translates to: PTKITGHSLTLFTYPLHLRRLPG*GSQYHC Trigger: ACAGTGATATTGGCTACCGCAGCCTGGCAGTCGGCG...TAAATGAAGTGGGTAGGTGAACAAAGTTAACGAATGCCCTGTTATTTTTGTAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS-3UTR GCA 90 bp | AAAAATAACAGGGCATTCGTTAACTTTGTTCACCTACCCACTTCATTTAACAAGGATGTCCTCGCCGACTaGCAGGCTGCGGTAGCCAAT | + |
Preference number: 4 (lower is better) Translates to: KNNRAFVNFVHLPTSFNKDVLAD*QAAVAN Trigger: ATTGGCTACCGCAGCCTGGCAGTCGGCGAGGACATC...CTTGTTAAATGAAGTGGGTAGGTGAACAAAGTTAACGAATGCCCTGTTATTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS-3UTR GCA 90 bp | ACAAAAATAACAGGGCATTCGTTAACTTTGTTCACCTACCCACTTCATTTAACAGTCCTCTCCTCCCCTTaGCATCAGCGAGGTCACGGT | + |
Preference number: 4 (lower is better) Translates to: TKITGHSLTLFTYPLHLTVLSSP*HQRGHG Trigger: ACCGTGACCTCGCTGATGGCAAGGGGAGGAGAGGAC...TGTTAAATGAAGTGGGTAGGTGAACAAAGTTAACGAATGCCCTGTTATTTTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS-3UTR CCA 90 bp | TATGTGGCCTACAAAAATAACAGGGCATTCGTTAACTTTGTTCACCTACCCACTAACATGTCCAAAGGGTaGGCCAGGTCAGCAGTAGCA | + |
Preference number: 4 (lower is better) Translates to: YVAYKNNRAFVNFVHLPTNMSKG*ARSAVA Trigger: TGCTACTGCTGACCTGGCCCACCCTTTGGACATGTT...AGTGGGTAGGTGAACAAAGTTAACGAATGCCCTGTTATTTTTGTAGGCCACATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS-3UTR TCA 90 bp | TATGTGGCCTACAAAAATAACAGGGCATTCGTTAACTTTGTTCACCTACCCACTAGTTGTGGCACCAGATaGACACACAAAGCAGGATCC | + |
Preference number: 4 (lower is better) Translates to: YVAYKNNRAFVNFVHLPTSCGTR*THKAGS Trigger: GGATCCTGCTTTGTGTGTTCATCTGGTGCCACAACT...AGTGGGTAGGTGAACAAAGTTAACGAATGCCCTGTTATTTTTGTAGGCCACATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS-3UTR GCA 90 bp | AACAGGGCATTCGTTAACTTTGTTCACCTACCCACTTCATTTAACAAGCATCTAAGTCAAATTCAGGCGTaGTGCAAGTCTCTCTCGCGC | + |
Preference number: 4 (lower is better) Translates to: NRAFVNFVHLPTSFNKHLSQIQA*CKSLSR Trigger: GCGCGAGAGAGACTTGCAGCACGCCTGAATTTGACT...TAGATGCTTGTTAAATGAAGTGGGTAGGTGAACAAAGTTAACGAATGCCCTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS-3UTR GCA 90 bp | AAAAATAACAGGGCATTCGTTAACTTTGTTCACCTACCCACTTCATTTAACAAGCAAATTCAGGCGTGCTaGAAGTCTCTCTCGCGCCAC | + |
Preference number: 4 (lower is better) Translates to: KNNRAFVNFVHLPTSFNKQIQAC*KSLSRH Trigger: GTGGCGCGAGAGAGACTTGCAGCACGCCTGAATTTG...CTTGTTAAATGAAGTGGGTAGGTGAACAAAGTTAACGAATGCCCTGTTATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS-3UTR CCA 90 bp | TATGTGGCCTACAAAAATAACAGGGCATTCGTTAACTTTGTTCACCTACCCACTTTCCGTACTCAGGTTTaGACCGTGTATTCTCCTCGT | + |
Preference number: 4 (lower is better) Translates to: YVAYKNNRAFVNFVHLPTFRTQV*TVYSPR Trigger: ACGAGGAGAATACACGGTCCAAACCTGAGTACGGAA...AGTGGGTAGGTGAACAAAGTTAACGAATGCCCTGTTATTTTTGTAGGCCACATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS-3UTR GCA 90 bp | ACTACAATTATGTGGCCTACAAAAATAACAGGGCATTCGTTAACTTTGTTCACCAAAGCTGTGCACTTCTaGAGACTCTGTGCGTGGTTC | + |
Preference number: 4 (lower is better) Translates to: TTIMWPTKITGHSLTLFTKAVHF*RLCAWF Trigger: GAACCACGCACAGAGTCTGCAGAAGTGCACAGCTTT...GGTGAACAAAGTTAACGAATGCCCTGTTATTTTTGTAGGCCACATAATTGTAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS-3UTR TCA 90 bp | ACTACAATTATGTGGCCTACAAAAATAACAGGGCATTCGTTAACTTTGTTCACCAACATTAGCACCCTCTaGTTTCGTTTCCACTTGGCT | + |
Preference number: 4 (lower is better) Translates to: TTIMWPTKITGHSLTLFTNISTL*FRFHLA Trigger: AGCCAAGTGGAAACGAAATCAGAGGGTGCTAATGTT...GGTGAACAAAGTTAACGAATGCCCTGTTATTTTTGTAGGCCACATAATTGTAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS-3UTR GCA 90 bp | TTCGTTAACTTTGTTCACCTACCCACTTCATTTAACAAGCATCTAACGAATTACCTGTCGATAAAGCTGTaGACTTCTGCAGACTCTGTG | + |
Preference number: 4 (lower is better) Translates to: FVNFVHLPTSFNKHLTNYLSIKL*TSADSV Trigger: CACAGAGTCTGCAGAAGTGCACAGCTTTATCGACAG...GTAATTCGTTAGATGCTTGTTAAATGAAGTGGGTAGGTGAACAAAGTTAACGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS-3UTR TCA 90 bp | ACTACAATTATGTGGCCTACAAAAATAACAGGGCATTCGTTAACTTTGTTCACCACAACGTCGGGATATTaGGATTCATCGAAAAAGTTC | + |
Preference number: 4 (lower is better) Translates to: TTIMWPTKITGHSLTLFTTTSGY*DSSKKF Trigger: GAACTTTTTCGATGAATCTCAATATCCCGACGTTGT...GGTGAACAAAGTTAACGAATGCCCTGTTATTTTTGTAGGCCACATAATTGTAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS CCA 90 bp | CAGCTGAAACTGCGTGAACGCGGTGCGGCGGCGGCGTTTCCTCTCTaGGGGCTGTGGTCCCTCAGCGGTTTGTGGCCCCTCCGCCGGCTG | + |
Preference number: 5 (lower is better) Translates to: QLKLRERGAAAAFPL*GLWSLSGLWPLRRL Trigger: CAGCCGGCGGAGGGGCCACAAACCGCTGAGGGACCACAGCCCCCAGAGAGGAAACGCCGCCGCCGCACCGCGTTCACGCAGTTTCAGCTG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS GCA 90 bp | CGCCACCCTCACGGTCTTGGTCGTCCGAGGGGACGGACCCTTCCGTaGCAACGTTGTTTTCCGCTTCTGTTCCGTACTCAGGTTTGGACC | + |
Preference number: 5 (lower is better) Translates to: RHPHGLGRPRGRTLP*QRCFPLLFRTQVWT Trigger: GGTCCAAACCTGAGTACGGAACAGAAGCGGAAAACAACGTTGGCACGGAAGGGTCCGTCCCCTCGGACGACCAAGACCGTGAGGGTGGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS GCA 90 bp | TACCCGCGAAGAGACTCCATGCTTCAAGCGCTGTCGATAAAGCTGTaGACTTCTGCAGACTCTGTGCGTGGTTCCGCGGCGATCCCGGGG | + |
Preference number: 5 (lower is better) Translates to: YPRRDSMLQALSIKL*TSADSVRGSAAIPG Trigger: CCCCGGGATCGCCGCGGAACCACGCACAGAGTCTGCAGAAGTGCACAGCTTTATCGACAGCGCTTGAAGCATGGAGTCTCTTCGCGGGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS TCA 90 bp | GAGATTCATCGAAAAAGTTCTCTAGCTCCTGCAGCTGAAACTGCGTaGACGCGGTGCGGCGGCGGCGTTTCCTCTCTGGGGGCTGTGGTC | + |
Preference number: 5 (lower is better) Translates to: EIHRKSSLAPAAETA*TRCGGGVSSLGAVV Trigger: GACCACAGCCCCCAGAGAGGAAACGCCGCCGCCGCACCGCGTTCACGCAGTTTCAGCTGCAGGAGCTAGAGAACTTTTTCGATGAATCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS GCA 90 bp | AAGAGACTCCATGCTTCAAGCGCTGTCGATAAAGCTGTGCACTTCTaGAGACTCTGTGCGTGGTTCCGCGGCGATCCCGGGGTTGGAACT | + |
Preference number: 5 (lower is better) Translates to: KRLHASSAVDKAVHF*RLCAWFRGDPGVGT Trigger: AGTTCCAACCCCGGGATCGCCGCGGAACCACGCACAGAGTCTGCAGAAGTGCACAGCTTTATCGACAGCGCTTGAAGCATGGAGTCTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS GCA 90 bp | GTTTCTCATCATTCACTTCCTCGATGTCCTCGCCGACTGCCAGGCTaGGGTAGCCAATATCACTGTGGGTGTACCCGCGAAGAGACTCCA | + |
Preference number: 5 (lower is better) Translates to: VSHHSLPRCPRRLPG*GSQYHCGCTREETP Trigger: TGGAGTCTCTTCGCGGGTACACCCACAGTGATATTGGCTACCGCAGCCTGGCAGTCGGCGAGGACATCGAGGAAGTGAATGATGAGAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS GCA 90 bp | CACGGTAAGTTTCTCATCATTCACTTCCTCGATGTCCTCGCCGACTaGCAGGCTGCGGTAGCCAATATCACTGTGGGTGTACCCGCGAAG | + |
Preference number: 5 (lower is better) Translates to: HGKFLIIHFLDVLAD*QAAVANITVGVPAK Trigger: CTTCGCGGGTACACCCACAGTGATATTGGCTACCGCAGCCTGGCAGTCGGCGAGGACATCGAGGAAGTGAATGATGAGAAACTTACCGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS CCA 90 bp | CTTCCGTGCCAACGTTGTTTTCCGCTTCTGTTCCGTACTCAGGTTTaGACCGTGTATTCTCCTCGTCCTCTCCTCCCCTTGCCATCAGCG | + |
Preference number: 5 (lower is better) Translates to: LPCQRCFPLLFRTQV*TVYSPRPLLPLPSA Trigger: CGCTGATGGCAAGGGGAGGAGAGGACGAGGAGAATACACGGTCCAAACCTGAGTACGGAACAGAAGCGGAAAACAACGTTGGCACGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS-3UTR CAA 90 bp | TATGTGGCCTACAAAAATAACAGGGCATTCGTTAACTTTGTTCACCTACCCACTTGGTCCCTCAGCGGTTaGTGGCCCCTCCGCCGGCTG | + |
Preference number: 5 (lower is better) Translates to: YVAYKNNRAFVNFVHLPTWSLSG*WPLRRL Trigger: CAGCCGGCGGAGGGGCCACAAACCGCTGAGGGACCA...AGTGGGTAGGTGAACAAAGTTAACGAATGCCCTGTTATTTTTGTAGGCCACATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS-3UTR CAA 90 bp | TATGTGGCCTACAAAAATAACAGGGCATTCGTTAACTTTGTTCACCTACCCACTCGTCCTCTCCTCCCCTaGCCATCAGCGAGGTCACGG | + |
Preference number: 5 (lower is better) Translates to: YVAYKNNRAFVNFVHLPTRPLLP*PSARSR Trigger: CCGTGACCTCGCTGATGGCAAGGGGAGGAGAGGACG...AGTGGGTAGGTGAACAAAGTTAACGAATGCCCTGTTATTTTTGTAGGCCACATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS-3UTR CAA 90 bp | ATAACAGGGCATTCGTTAACTTTGTTCACCTACCCACTTCATTTAACAAGCATCGCCACCCTCACGGTCTaGGTCGTCCGAGGGGACGGA | + |
Preference number: 5 (lower is better) Translates to: ITGHSLTLFTYPLHLTSIATLTV*VVRGDG Trigger: TCCGTCCCCTCGGACGACCAAGACCGTGAGGGTGGC...GATGCTTGTTAAATGAAGTGGGTAGGTGAACAAAGTTAACGAATGCCCTGTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS-3UTR CAA 90 bp | TTCGTTAACTTTGTTCACCTACCCACTTCATTTAACAAGCATCTAACGAATTACCGGCTCCTCCTGCTCTaGCTTCAGCTCGAGCAGGGG | + |
Preference number: 5 (lower is better) Translates to: FVNFVHLPTSFNKHLTNYRLLLL*LQLEQG Trigger: CCCCTGCTCGAGCTGAAGCAAGAGCAGGAGGAGCCG...GTAATTCGTTAGATGCTTGTTAAATGAAGTGGGTAGGTGAACAAAGTTAACGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS-3UTR CAA 90 bp | ATAACAGGGCATTCGTTAACTTTGTTCACCTACCCACTTCATTTAACAAGCATCCCTTCCGTGCCAACGTaGTTTTCCGCTTCTGTTCCG | + |
Preference number: 5 (lower is better) Translates to: ITGHSLTLFTYPLHLTSIPSVPT*FSASVP Trigger: CGGAACAGAAGCGGAAAACAACGTTGGCACGGAAGG...GATGCTTGTTAAATGAAGTGGGTAGGTGAACAAAGTTAACGAATGCCCTGTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS-3UTR CAA 90 bp | AAAAATAACAGGGCATTCGTTAACTTTGTTCACCTACCCACTTCATTTAACAAGGTTCCGTACTCAGGTTaGGACCGTGTATTCTCCTCG | + |
Preference number: 5 (lower is better) Translates to: KNNRAFVNFVHLPTSFNKVPYSG*DRVFSS Trigger: CGAGGAGAATACACGGTCCAAACCTGAGTACGGAAC...CTTGTTAAATGAAGTGGGTAGGTGAACAAAGTTAACGAATGCCCTGTTATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS-3UTR CAA 90 bp | TTCGTTAACTTTGTTCACCTACCCACTTCATTTAACAAGCATCTAACGAATTACCATCTAACGAATTACTaGATGCTGTGCTGTGCACAA | + |
Preference number: 5 (lower is better) Translates to: FVNFVHLPTSFNKHLTNYHLTNY*MLCCAQ Trigger: TTGTGCACAGCACAGCATCAAGTAATTCGTTAGATG...GTAATTCGTTAGATGCTTGTTAAATGAAGTGGGTAGGTGAACAAAGTTAACGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS-3UTR CAA 90 bp | TTCGTTAACTTTGTTCACCTACCCACTTCATTTAACAAGCATCTAACGAATTACCACAACGTCGGGATATaGAGATTCATCGAAAAAGTT | + |
Preference number: 5 (lower is better) Translates to: FVNFVHLPTSFNKHLTNYHNVGI*RFIEKV Trigger: AACTTTTTCGATGAATCTCAATATCCCGACGTTGTG...GTAATTCGTTAGATGCTTGTTAAATGAAGTGGGTAGGTGAACAAAGTTAACGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS CCA 72 bp | CGCGGTGCGGCGGCGGCGTTTCCTCTCTGGGGGCTGTaGTCCCTCAGCGGTTTGTGGCCCCTCCGCCGGCTG | + |
Preference number: 6 (lower is better) Translates to: RGAAAAFPLWGL*SLSGLWPLRRL Trigger: CAGCCGGCGGAGGGGCCACAAACCGCTGAGGGACCACAGCCCCCAGAGAGGAAACGCCGCCGCCGCACCGCG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS CCA 72 bp | TGCTCCGGCTCGTGGCCGCCGCCACCCTCACGGTCTTaGTCGTCCGAGGGGACGGACCCTTCCGTGCCAACG | + |
Preference number: 6 (lower is better) Translates to: CSGSWPPPPSRS*SSEGTDPSVPT Trigger: CGTTGGCACGGAAGGGTCCGTCCCCTCGGACGACCAAGACCGTGAGGGTGGCGGCGGCCACGAGCCGGAGCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS CCA 72 bp | CTGCGTGAACGCGGTGCGGCGGCGGCGTTTCCTCTCTaGGGGCTGTGGTCCCTCAGCGGTTTGTGGCCCCTC | + |
Preference number: 6 (lower is better) Translates to: LRERGAAAAFPL*GLWSLSGLWPL Trigger: GAGGGGCCACAAACCGCTGAGGGACCACAGCCCCCAGAGAGGAAACGCCGCCGCCGCACCGCGTTCACGCAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS CAA 72 bp | TTGCTCCGGCTCGTGGCCGCCGCCACCCTCACGGTCTaGGTCGTCCGAGGGGACGGACCCTTCCGTGCCAAC | + |
Preference number: 6 (lower is better) Translates to: LLRLVAAATLTV*VVRGDGPFRAN Trigger: GTTGGCACGGAAGGGTCCGTCCCCTCGGACGACCAAGACCGTGAGGGTGGCGGCGGCCACGAGCCGGAGCAA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS TCA 72 bp | GGGGCCCATGTGATGTGTACAGGAGCCAGGCCAGTGTaGGGCACATGTGACCTGGGTGGCAGAGGCGCCATG | + |
Preference number: 6 (lower is better) Translates to: GAHVMCTGARPV*GTCDLGGRGAM Trigger: CATGGCGCCTCTGCCACCCAGGTCACATGTGCCTCACACTGGCCTGGCTCCTGTACACATCACATGGGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS TCA 72 bp | CGAAAAAGTTCTCTAGCTCCTGCAGCTGAAACTGCGTaGACGCGGTGCGGCGGCGGCGTTTCCTCTCTGGGG | + |
Preference number: 6 (lower is better) Translates to: RKSSLAPAAETA*TRCGGGVSSLG Trigger: CCCCAGAGAGGAAACGCCGCCGCCGCACCGCGTTCACGCAGTTTCAGCTGCAGGAGCTAGAGAACTTTTTCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS GCA 72 bp | CATGCTTCAAGCGCTGTCGATAAAGCTGTGCACTTCTaGAGACTCTGTGCGTGGTTCCGCGGCGATCCCGGG | + |
Preference number: 6 (lower is better) Translates to: HASSAVDKAVHF*RLCAWFRGDPG Trigger: CCCGGGATCGCCGCGGAACCACGCACAGAGTCTGCAGAAGTGCACAGCTTTATCGACAGCGCTTGAAGCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS GCA 72 bp | CACGGTCTTGGTCGTCCGAGGGGACGGACCCTTCCGTaGCAACGTTGTTTTCCGCTTCTGTTCCGTACTCAG | + |
Preference number: 6 (lower is better) Translates to: HGLGRPRGRTLP*QRCFPLLFRTQ Trigger: CTGAGTACGGAACAGAAGCGGAAAACAACGTTGGCACGGAAGGGTCCGTCCCCTCGGACGACCAAGACCGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS GCA 72 bp | CATTCACTTCCTCGATGTCCTCGCCGACTGCCAGGCTaGGGTAGCCAATATCACTGTGGGTGTACCCGCGAA | + |
Preference number: 6 (lower is better) Translates to: HSLPRCPRRLPG*GSQYHCGCTRE Trigger: TTCGCGGGTACACCCACAGTGATATTGGCTACCGCAGCCTGGCAGTCGGCGAGGACATCGAGGAAGTGAATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS CAA 72 bp | TGGTCGTCCGAGGGGACGGACCCTTCCGTGCCAACGTaGTTTTCCGCTTCTGTTCCGTACTCAGGTTTGGAC | + |
Preference number: 6 (lower is better) Translates to: WSSEGTDPSVPT*FSASVPYSGLD Trigger: GTCCAAACCTGAGTACGGAACAGAAGCGGAAAACAACGTTGGCACGGAAGGGTCCGTCCCCTCGGACGACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS CAA 90 bp | TCACGGTCTTGGTCGTCCGAGGGGACGGACCCTTCCGTGCCAACGTaGTTTTCCGCTTCTGTTCCGTACTCAGGTTTGGACCGTGTATTC | + |
Preference number: 6 (lower is better) Translates to: SRSWSSEGTDPSVPT*FSASVPYSGLDRVF Trigger: GAATACACGGTCCAAACCTGAGTACGGAACAGAAGCGGAAAACAACGTTGGCACGGAAGGGTCCGTCCCCTCGGACGACCAAGACCGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS GCA 72 bp | AGAGACTCCATGCTTCAAGCGCTGTCGATAAAGCTGTaGACTTCTGCAGACTCTGTGCGTGGTTCCGCGGCG | + |
Preference number: 6 (lower is better) Translates to: RDSMLQALSIKL*TSADSVRGSAA Trigger: CGCCGCGGAACCACGCACAGAGTCTGCAGAAGTGCACAGCTTTATCGACAGCGCTTGAAGCATGGAGTCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS CAA 90 bp | CCTTCCGTGCCAACGTTGTTTTCCGCTTCTGTTCCGTACTCAGGTTaGGACCGTGTATTCTCCTCGTCCTCTCCTCCCCTTGCCATCAGC | + |
Preference number: 6 (lower is better) Translates to: PSVPTLFSASVPYSG*DRVFSSSSPPLAIS Trigger: GCTGATGGCAAGGGGAGGAGAGGACGAGGAGAATACACGGTCCAAACCTGAGTACGGAACAGAAGCGGAAAACAACGTTGGCACGGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS GCA 72 bp | CCAAACCTGCACTCTGTCTTCAGTCAAATTCAGGCGTaGTGCAAGTCTCTCTCGCGCCACAACGTCGGGATA | + |
Preference number: 6 (lower is better) Translates to: PNLHSVFSQIQA*CKSLSRHNVGI Trigger: TATCCCGACGTTGTGGCGCGAGAGAGACTTGCAGCACGCCTGAATTTGACTGAAGACAGAGTGCAGGTTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS GCA 72 bp | TTTCTCATCATTCACTTCCTCGATGTCCTCGCCGACTaGCAGGCTGCGGTAGCCAATATCACTGTGGGTGTA | + |
Preference number: 6 (lower is better) Translates to: FLIIHFLDVLAD*QAAVANITVGV Trigger: TACACCCACAGTGATATTGGCTACCGCAGCCTGGCAGTCGGCGAGGACATCGAGGAAGTGAATGATGAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS GCA 72 bp | AACCTGCACTCTGTCTTCAGTCAAATTCAGGCGTGCTaGAAGTCTCTCTCGCGCCACAACGTCGGGATATTG | + |
Preference number: 6 (lower is better) Translates to: NLHSVFSQIQAC*KSLSRHNVGIL Trigger: CAATATCCCGACGTTGTGGCGCGAGAGAGACTTGCAGCACGCCTGAATTTGACTGAAGACAGAGTGCAGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS CCA 72 bp | CAACGTTGTTTTCCGCTTCTGTTCCGTACTCAGGTTTaGACCGTGTATTCTCCTCGTCCTCTCCTCCCCTTG | + |
Preference number: 6 (lower is better) Translates to: QRCFPLLFRTQV*TVYSPRPLLPL Trigger: CAAGGGGAGGAGAGGACGAGGAGAATACACGGTCCAAACCTGAGTACGGAACAGAAGCGGAAAACAACGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS CAA 72 bp | CCAACGTTGTTTTCCGCTTCTGTTCCGTACTCAGGTTaGGACCGTGTATTCTCCTCGTCCTCTCCTCCCCTT | + |
Preference number: 6 (lower is better) Translates to: PTLFSASVPYSG*DRVFSSSSPPL Trigger: AAGGGGAGGAGAGGACGAGGAGAATACACGGTCCAAACCTGAGTACGGAACAGAAGCGGAAAACAACGTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000372588.4 |
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CDS TCA 72 bp | GCTGCAAGTCTCTCTCGCGCCACAACGTCGGGATATTaGGATTCATCGAAAAAGTTCTCTAGCTCCTGCAGC | + |
Preference number: 6 (lower is better) Translates to: AASLSRATTSGY*DSSKKFSSSCS Trigger: GCTGCAGGAGCTAGAGAACTTTTTCGATGAATCTCAATATCCCGACGTTGTGGCGCGAGAGAGACTTGCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000372588.4 |