RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ESRP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000103067

Ensembl transcript IDs: ENST00000251366.7, ENST00000473183.7, ENST00000562567.6, ENST00000562724.1, ENST00000562738.5, ENST00000563159.5, ENST00000564382.5, ENST00000564465.1, ENST00000565213.2, ENST00000565858.5, ENST00000566774.1, ENST00000569964.5

Found 517 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCAGTCACTGGGCACTCTGGCCCCAGGAAGCCAAGCACGTCCGTTaGCCCAGCCGAGAAGGGCAGTCCCCGCAGCCGCAGGATCACTTG +
Preference number: 1 (lower is better)
Translates to: PSHWALWPQEAKHVR*PSREGQSPQPQDHL
Trigger: CAAGTGATCCTGCGGCTGCGGGGACTGCCCTTCTCGGCTGGGCCAACGGACGTGCTTGGCTTCCTGGGGCCAGAGTGCCCAGTGACTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR CCA 90 bp CAAGCAAAGAGGGCGAAGGCATCACCAGTCGGCCGGCCATCAGGATaGCGCACAAAGAGCAGCCCCTCGGTACCCCCAGTCACTGGGCAC +
Preference number: 1 (lower is better)
Translates to: QAKRAKASPVGRPSG*RTKSSPSVPPVTGH
Trigger: GTGCCCAGTGACTGGGGGTACCGAGGGGCTGCTCTTTGTGCGCCATCCTGATGGCCGGCCGACTGGTGATGCCTTCGCCCTCTTTGCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR CCA 90 bp TCGCCCGATGGCCGGCCCTGCTGGTTGAGCACCATGTGTACACCGTaGGGCCGAATGTCAGCTGCTGCCTCCCCCAGAAAGCTCAGGATG +
Preference number: 1 (lower is better)
Translates to: SPDGRPCWLSTMCTP*GRMSAAASPRKLRM
Trigger: CATCCTGAGCTTTCTGGGGGAGGCAGCAGCTGACATTCGGCCCCACGGTGTACACATGGTGCTCAACCAGCAGGGCCGGCCATCGGGCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR CCA 90 bp AGCAAGCCTGCCGTGGACCTGTCAGCCCCACGATATCTGTCGGCATaGGCCACAGCCAGGACAGACTTAAGGGCTCTCCAGGTGCCAGTC +
Preference number: 1 (lower is better)
Translates to: SKPAVDLSAPRYLSA*ATARTDLRALQVPV
Trigger: GACTGGCACCTGGAGAGCCCTTAAGTCTGTCCTGGCTGTGGCCCATGCCGACAGATATCGTGGGGCTGACAGGTCCACGGCAGGCTTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR CCA 90 bp GTTGGCCCAGCCGAGAAGGGCAGTCCCCGCAGCCGCAGGATCACTTaGTCTTCCCGTGACAAGAAACGAGCCACCTCTAGTGATGTGCCC +
Preference number: 1 (lower is better)
Translates to: VGPAEKGSPRSRRIT*SSRDKKRATSSDVP
Trigger: GGGCACATCACTAGAGGTGGCTCGTTTCTTGTCACGGGAAGACCAAGTGATCCTGCGGCTGCGGGGACTGCCCTTCTCGGCTGGGCCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR CCA 90 bp TGGGAAGGGGATGGGCAGCAGTGGGGCAGTCAGTGTAGGAAGGAGTaGGCCGGATGCATAGCGGTTCAAGACCTGCTGCACTTCGGCTGC +
Preference number: 1 (lower is better)
Translates to: WEGDGQQWGSQCRKE*AGCIAVQDLLHFGC
Trigger: GCAGCCGAAGTGCAGCAGGTCTTGAACCGCTATGCATCCGGCCCACTCCTTCCTACACTGACTGCCCCACTGCTGCCCATCCCCTTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR CCA 90 bp TGTCAGCTGCTGCCTCCCCCAGAAAGCTCAGGATGTCTTCAATGGTaGCCGTGTAGGGCAGGCCTCGGAGGCGTACACAGTCCCTCCCAG +
Preference number: 1 (lower is better)
Translates to: CQLLPPPESSGCLQW*PCRAGLGGVHSPSQ
Trigger: CTGGGAGGGACTGTGTACGCCTCCGAGGCCTGCCCTACACGGCCACCATTGAAGACATCCTGAGCTTTCTGGGGGAGGCAGCAGCTGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR CCA 90 bp GAATGTCAGCTGCTGCCTCCCCCAGAAAGCTCAGGATGTCTTCAATaGTGGCCGTGTAGGGCAGGCCTCGGAGGCGTACACAGTCCCTCC +
Preference number: 1 (lower is better)
Translates to: ECQLLPPPESSGCLQ*WPCRAGLGGVHSPS
Trigger: GGAGGGACTGTGTACGCCTCCGAGGCCTGCCCTACACGGCCACCATTGAAGACATCCTGAGCTTTCTGGGGGAGGCAGCAGCTGACATTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR GCA 90 bp CTGCTGGTTGAGCACCATGTGTACACCGTGGGGCCGAATGTCAGCTaGTGCCTCCCCCAGAAAGCTCAGGATGTCTTCAATGGTGGCCGT +
Preference number: 1 (lower is better)
Translates to: LLVEHHVYTVGPNVS*CLPQKAQDVFNGGR
Trigger: ACGGCCACCATTGAAGACATCCTGAGCTTTCTGGGGGAGGCAGCAGCTGACATTCGGCCCCACGGTGTACACATGGTGCTCAACCAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR CCA 90 bp GGCACAACATGGTCTCTGAGGTCCAGATACTCTGAGGGTAGGGGCTaGCTCTCTCTGCCTCCCTATCCCCTACAAGAGGGACAGGGAGAG +
Preference number: 1 (lower is better)
Translates to: GTTWSLRSRYSEGRG*LSLPPYPLQEGQGE
Trigger: CTCTCCCTGTCCCTCTTGTAGGGGATAGGGAGGCAGAGAGAGCCAGCCCCTACCCTCAGAGTATCTGGACCTCAGAGACCATGTTGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR GCA 90 bp CTGGTTGAGCACCATGTGTACACCGTGGGGCCGAATGTCAGCTGCTaGCTCCCCCAGAAAGCTCAGGATGTCTTCAATGGTGGCCGTGTA +
Preference number: 1 (lower is better)
Translates to: LVEHHVYTVGPNVSC*LPQKAQDVFNGGRV
Trigger: TACACGGCCACCATTGAAGACATCCTGAGCTTTCTGGGGGAGGCAGCAGCTGACATTCGGCCCCACGGTGTACACATGGTGCTCAACCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR GCA 90 bp AAGACGCTGAGCAGATCCTTCATACCAGCCGTGTATGGGACACCCTaGATGCGGACCAAGGCTCCTGACTGGGACAACACTGAGGTGGGA +
Preference number: 1 (lower is better)
Translates to: KTLSRSFIPAVYGTP*MRTKAPDWDNTEVG
Trigger: TCCCACCTCAGTGTTGTCCCAGTCAGGAGCCTTGGTCCGCATGCAGGGTGTCCCATACACGGCTGGTATGAAGGATCTGCTCAGCGTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR CCA 90 bp GTCCAGCCATTGTCTTTGGGGGAAACAGGCAGAATAAGTGGAGGATaGAGCTGGGGCTTGGGCTCCTCTAGGTACCTTCTGAGAGCTTTG +
Preference number: 1 (lower is better)
Translates to: VQPLSLGETGRISGG*SWGLGSSRYLLRAL
Trigger: CAAAGCTCTCAGAAGGTACCTAGAGGAGCCCAAGCCCCAGCTCCATCCTCCACTTATTCTGCCTGTTTCCCCCAAAGACAATGGCTGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR CCA 90 bp CCATTGTCTTTGGGGGAAACAGGCAGAATAAGTGGAGGATGGAGCTaGGGCTTGGGCTCCTCTAGGTACCTTCTGAGAGCTTTGACAAGC +
Preference number: 1 (lower is better)
Translates to: PLSLGETGRISGGWS*GLGSSRYLLRALTS
Trigger: GCTTGTCAAAGCTCTCAGAAGGTACCTAGAGGAGCCCAAGCCCCAGCTCCATCCTCCACTTATTCTGCCTGTTTCCCCCAAAGACAATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR GCA 90 bp TTCTCTCCTACAAACACACCCATTCCTTGGGGGCTTGTAACACAGTaGGAGGTGGGTCACCAACAGGCATCAGACTGGTGTAGTCATCAG +
Preference number: 1 (lower is better)
Translates to: FSPTNTPIPWGLVTQ*EVGHQQASDWCSHQ
Trigger: CTGATGACTACACCAGTCTGATGCCTGTTGGTGACCCACCTCGCACTGTGTTACAAGCCCCCAAGGAATGGGTGTGTTTGTAGGAGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR CCA 90 bp TTGACAAGCCAGAAAGAAGCTACCAGGTTGAGGGTGCTGGTCTTCTaGACTCAGGAGAGACATGTTCGCCGAGGATATCAGCTGGCTCTT +
Preference number: 1 (lower is better)
Translates to: LTSQKEATRLRVLVF*TQERHVRRGYQLAL
Trigger: AAGAGCCAGCTGATATCCTCGGCGAACATGTCTCTCCTGAGTCCAGAAGACCAGCACCCTCAACCTGGTAGCTTCTTTCTGGCTTGTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR CCA 90 bp TGCGTGCAAAGGACATTCCATGGTGTCTGCTGGGTTCAGGGCAACTaGCTTTCCCAAGGCATACAAGAAAAGTTGGCAGAAAGTCCTCCC +
Preference number: 1 (lower is better)
Translates to: CVQRTFHGVCWVQGN*LSQGIQEKLAESPP
Trigger: GGGAGGACTTTCTGCCAACTTTTCTTGTATGCCTTGGGAAAGCCAGTTGCCCTGAACCCAGCAGACACCATGGAATGTCCTTTGCACGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR CCA 90 bp TGGTCTTCTGGACTCAGGAGAGACATGTTCGCCGAGGATATCAGCTaGCTCTTACCTCCTGGCTTTCTCTCCTACAAACACACCCATTCC +
Preference number: 1 (lower is better)
Translates to: WSSGLRRDMFAEDIS*LLPPGFLSYKHTHS
Trigger: GGAATGGGTGTGTTTGTAGGAGAGAAAGCCAGGAGGTAAGAGCCAGCTGATATCCTCGGCGAACATGTCTCTCCTGAGTCCAGAAGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR CCA 90 bp GAGGCTTCAGTTCTGTACCATTTAATGCGTGCAAAGGACATTCCATaGTGTCTGCTGGGTTCAGGGCAACTGGCTTTCCCAAGGCATACA +
Preference number: 1 (lower is better)
Translates to: EASVLYHLMRAKDIP*CLLGSGQLAFPRHT
Trigger: TGTATGCCTTGGGAAAGCCAGTTGCCCTGAACCCAGCAGACACCATGGAATGTCCTTTGCACGCATTAAATGGTACAGAACTGAAGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR TCA 90 bp CTCAGAGGCTCAGATGGACCCTTGATTCTCCCAGGAGTCATACATTaGAGGTACCAGAGCTTCCATTTTATAAAAGAAAGCAAGCCTGCC +
Preference number: 1 (lower is better)
Translates to: LRGSDGPLILPGVIH*RYQSFHFIKESKPA
Trigger: GGCAGGCTTGCTTTCTTTTATAAAATGGAAGCTCTGGTACCTTCAATGTATGACTCCTGGGAGAATCAAGGGTCCATCTGAGCCTCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR TCA 90 bp GAGGTAGAACATTGGGATCTTTACTCAGAGGCTCAGATGGACCCTTaGTTCTCCCAGGAGTCATACATTGAAGGTACCAGAGCTTCCATT +
Preference number: 1 (lower is better)
Translates to: EVEHWDLYSEAQMDP*FSQESYIEGTRASI
Trigger: AATGGAAGCTCTGGTACCTTCAATGTATGACTCCTGGGAGAATCAAGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAATGTTCTACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR CCA 90 bp CTTATGCCCACCTGGAGAGGGGCTAGCATCTTTAGGTGGGACCACCCCTGGCACGAGTGTTCCTCCGCCTaGGGTTGGTGTGGAGCCCCT +
Preference number: 2 (lower is better)
Translates to: LMPTWRGASIFRWDHPWHECSSA*GWCGAP
Trigger: AGGGGCTCCACACCAACCCCAGGCGGAGGAACACTC...GTGCCAGGGGTGGTCCCACCTAAAGATGCTAGCCCCTCTCCAGGTGGGCATAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
3UTR-3UTR GCA 90 bp CCATGTGTACACCGTGGGGCCGAATGTCAGCTGCTGCCTCCCCCAGAAAGCTCACGGTTCAAGACCTGCTaGACTTCGGCTGCAGTGCTC +
Preference number: 2 (lower is better)
Translates to: PCVHRGAECQLLPPPESSRFKTC*TSAAVL
Trigger: GAGCACTGCAGCCGAAGTGCAGCAGGTCTTGAACCG...TGAGCTTTCTGGGGGAGGCAGCAGCTGACATTCGGCCCCACGGTGTACACATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR-3UTR CCA 90 bp GCATCTTTAGGTGGGACCACCCCTGGCACAACATGGTCTCTGAGGTCCAGATACGCCAAGCACGTCCGTTaGCCCAGCCGAGAAGGGCAG +
Preference number: 2 (lower is better)
Translates to: ASLGGTTPGTTWSLRSRYAKHVR*PSREGQ
Trigger: CTGCCCTTCTCGGCTGGGCCAACGGACGTGCTTGGC...GTATCTGGACCTCAGAGACCATGTTGTGCCAGGGGTGGTCCCACCTAAAGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR-3UTR GCA 90 bp GGAGAGGGGCTAGCATCTTTAGGTGGGACCACCCCTGGCACAACATGGTCTCTGAGGTGCCAGTCAAGATaGCTGGCTCAGGCCATCAGG +
Preference number: 2 (lower is better)
Translates to: GEGLASLGGTTPGTTWSLRCQSR*LAQAIR
Trigger: CCTGATGGCCTGAGCCAGGCATCTTGACTGGCACCT...CAGAGACCATGTTGTGCCAGGGGTGGTCCCACCTAAAGATGCTAGCCCCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR CCA 90 bp GGAGAGGGGCTAGCATCTTTAGGTGGGACCACCCCTGGCACAACATGGTCTCTGGCCAGTCAAGATGCCTaGCTCAGGCCATCAGGAGCT +
Preference number: 2 (lower is better)
Translates to: GEGLASLGGTTPGTTWSLASQDA*LRPSGA
Trigger: AGCTCCTGATGGCCTGAGCCAGGCATCTTGACTGGC...CAGAGACCATGTTGTGCCAGGGGTGGTCCCACCTAAAGATGCTAGCCCCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR CCA 90 bp TTACTCCTTATGCCCACCTGGAGAGGGGCTAGCATCTTTAGGTGGGACCACCCCAGTCACTGGGCACTCTaGCCCCAGGAAGCCAAGCAC +
Preference number: 2 (lower is better)
Translates to: LLLMPTWRGASIFRWDHPSHWAL*PQEAKH
Trigger: GTGCTTGGCTTCCTGGGGCCAGAGTGCCCAGTGACT...GGGGTGGTCCCACCTAAAGATGCTAGCCCCTCTCCAGGTGGGCATAAGGAGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR-3UTR CCA 90 bp ATTGTCTTTGGGGGAAACAGGCAGAATAAGTGGAGGATGGAGCTGGGGCTTGGGGAAGGCATCGCCCGATaGCCGGCCCTGCTGGTTGAG +
Preference number: 2 (lower is better)
Translates to: IVFGGNRQNKWRMELGLGEGIAR*PALLVE
Trigger: CTCAACCAGCAGGGCCGGCCATCGGGCGATGCCTTC...CCCAAGCCCCAGCTCCATCCTCCACTTATTCTGCCTGTTTCCCCCAAAGACAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR-3UTR TCA 90 bp TTGAGCACCATGTGTACACCGTGGGGCCGAATGTCAGCTGCTGCCTCCCCCAGAGCTCAGATGGACCCTTaGTTCTCCCAGGAGTCATAC +
Preference number: 2 (lower is better)
Translates to: LSTMCTPWGRMSAAASPRAQMDP*FSQESY
Trigger: GTATGACTCCTGGGAGAATCAAGGGTCCATCTGAGC...TCTGGGGGAGGCAGCAGCTGACATTCGGCCCCACGGTGTACACATGGTGCTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR-3UTR GCA 90 bp TTACTCCTTATGCCCACCTGGAGAGGGGCTAGCATCTTTAGGTGGGACCACCCCAGGTGCCAGTCAAGATaGCTGGCTCAGGCCATCAGG +
Preference number: 2 (lower is better)
Translates to: LLLMPTWRGASIFRWDHPRCQSR*LAQAIR
Trigger: CCTGATGGCCTGAGCCAGGCATCTTGACTGGCACCT...GGGGTGGTCCCACCTAAAGATGCTAGCCCCTCTCCAGGTGGGCATAAGGAGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR GCA 90 bp GGAGAGGGGCTAGCATCTTTAGGTGGGACCACCCCTGGCACAACATGGTCTCTGAAAAGAAAGCAAGCCTaGCGTGGACCTGTCAGCCCC +
Preference number: 2 (lower is better)
Translates to: GEGLASLGGTTPGTTWSLKRKQA*RGPVSP
Trigger: GGGGCTGACAGGTCCACGGCAGGCTTGCTTTCTTTT...CAGAGACCATGTTGTGCCAGGGGTGGTCCCACCTAAAGATGCTAGCCCCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR GCA 90 bp TTACTCCTTATGCCCACCTGGAGAGGGGCTAGCATCTTTAGGTGGGACCACCCCGTGTATGGGACACCCTaGATGCGGACCAAGGCTCCT +
Preference number: 2 (lower is better)
Translates to: LLLMPTWRGASIFRWDHPVYGTP*MRTKAP
Trigger: AGGAGCCTTGGTCCGCATGCAGGGTGTCCCATACAC...GGGGTGGTCCCACCTAAAGATGCTAGCCCCTCTCCAGGTGGGCATAAGGAGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR-3UTR CCA 90 bp CTTATGCCCACCTGGAGAGGGGCTAGCATCTTTAGGTGGGACCACCCCTGGCACGCCGAGGATATCAGCTaGCTCTTACCTCCTGGCTTT +
Preference number: 2 (lower is better)
Translates to: LMPTWRGASIFRWDHPWHAEDIS*LLPPGF
Trigger: AAAGCCAGGAGGTAAGAGCCAGCTGATATCCTCGGC...GTGCCAGGGGTGGTCCCACCTAAAGATGCTAGCCCCTCTCCAGGTGGGCATAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR TCA 90 bp ATGGGACACCCTGCATGCGGACCAAGGCTCCTGACTGGGACAACACTGAGGTGGTCTGCTGATGTCATCTaGATGAAGGCATCGCCCGAT +
Preference number: 2 (lower is better)
Translates to: MGHPACGPRLLTGTTLRWSADVI*MKASPD
Trigger: ATCGGGCGATGCCTTCATTCAGATGACATCAGCAGA...CCACCTCAGTGTTGTCCCAGTCAGGAGCCTTGGTCCGCATGCAGGGTGTCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR-3UTR GCA 90 bp ATGGGACACCCTGCATGCGGACCAAGGCTCCTGACTGGGACAACACTGAGGTGGATCTGTTACTCCTTATaGCCACCTGGAGAGGGGCTA +
Preference number: 2 (lower is better)
Translates to: MGHPACGPRLLTGTTLRWICYSL*PPGEGL
Trigger: TAGCCCCTCTCCAGGTGGGCATAAGGAGTAACAGAT...CCACCTCAGTGTTGTCCCAGTCAGGAGCCTTGGTCCGCATGCAGGGTGTCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR-3UTR CCA 90 bp TTACTCCTTATGCCCACCTGGAGAGGGGCTAGCATCTTTAGGTGGGACCACCCCGCTAGCATCTTTAGGTaGGACCACCCCTGGCACAAC +
Preference number: 2 (lower is better)
Translates to: LLLMPTWRGASIFRWDHPASIFR*DHPWHN
Trigger: GTTGTGCCAGGGGTGGTCCCACCTAAAGATGCTAGC...GGGGTGGTCCCACCTAAAGATGCTAGCCCCTCTCCAGGTGGGCATAAGGAGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR CCA 90 bp TTACTCCTTATGCCCACCTGGAGAGGGGCTAGCATCTTTAGGTGGGACCACCCCACCCCTGGCACAACATaGTCTCTGAGGTCCAGATAC +
Preference number: 2 (lower is better)
Translates to: LLLMPTWRGASIFRWDHPTPGTT*SLRSRY
Trigger: GTATCTGGACCTCAGAGACCATGTTGTGCCAGGGGT...GGGGTGGTCCCACCTAAAGATGCTAGCCCCTCTCCAGGTGGGCATAAGGAGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR CAA 90 bp TGGCTCTTACCTCCTGGCTTTCTCTCCTACAAACACACCCATTCCTaGGGGGCTTGTAACACAGTGCGAGGTGGGTCACCAACAGGCATC +
Preference number: 2 (lower is better)
Translates to: WLLPPGFLSYKHTHS*GACNTVRGGSPTGI
Trigger: GATGCCTGTTGGTGACCCACCTCGCACTGTGTTACAAGCCCCCAAGGAATGGGTGTGTTTGTAGGAGAGAAAGCCAGGAGGTAAGAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR-3UTR CCA 90 bp CATGGTGTCTGCTGGGTTCAGGGCAACTGGCTTTCCCAAGGCATACAAGAAAAGGCCAGTCAAGATGCCTaGCTCAGGCCATCAGGAGCT +
Preference number: 2 (lower is better)
Translates to: HGVCWVQGNWLSQGIQEKASQDA*LRPSGA
Trigger: AGCTCCTGATGGCCTGAGCCAGGCATCTTGACTGGC...CTTTTCTTGTATGCCTTGGGAAAGCCAGTTGCCCTGAACCCAGCAGACACCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR CCA 90 bp GGACAGGGAGAGGTAGAACATTGGGATCTTTACTCAGAGGCTCAGATGGACCCTCGATATCTGTCGGCATaGGCCACAGCCAGGACAGAC +
Preference number: 2 (lower is better)
Translates to: GQGEVEHWDLYSEAQMDPRYLSA*ATARTD
Trigger: GTCTGTCCTGGCTGTGGCCCATGCCGACAGATATCG...AGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAATGTTCTACCTCTCCCTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR CCA 90 bp GGACAGGGAGAGGTAGAACATTGGGATCTTTACTCAGAGGCTCAGATGGACCCTAAAGCAAGCCTGCCGTaGACCTGTCAGCCCCACGAT +
Preference number: 2 (lower is better)
Translates to: GQGEVEHWDLYSEAQMDPKASLP*TCQPHD
Trigger: ATCGTGGGGCTGACAGGTCCACGGCAGGCTTGCTTT...AGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAATGTTCTACCTCTCCCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR CCA 90 bp TTACTCCTTATGCCCACCTGGAGAGGGGCTAGCATCTTTAGGTGGGACCACCCCTGGGTTCAGGGCAACTaGCTTTCCCAAGGCATACAA +
Preference number: 2 (lower is better)
Translates to: LLLMPTWRGASIFRWDHPWVQGN*LSQGIQ
Trigger: TTGTATGCCTTGGGAAAGCCAGTTGCCCTGAACCCA...GGGGTGGTCCCACCTAAAGATGCTAGCCCCTCTCCAGGTGGGCATAAGGAGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR TCA 90 bp TGGACCCTTGATTCTCCCAGGAGTCATACATTGAAGGTACCAGAGCTTCCATTTGCCGGCCCTGCTGGTTaGGCACCATGTGTACACCGT +
Preference number: 2 (lower is better)
Translates to: WTLDSPRSHTLKVPELPFAGPAG*APCVHR
Trigger: ACGGTGTACACATGGTGCTCAACCAGCAGGGCCGGC...AAATGGAAGCTCTGGTACCTTCAATGTATGACTCCTGGGAGAATCAAGGGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR-3UTR GCA 90 bp TTGGGATCTTTACTCAGAGGCTCAGATGGACCCTTGATTCTCCCAGGAGTCATAGGGGCTGGCTCTCTCTaGCTCCCTATCCCCTACAAG +
Preference number: 2 (lower is better)
Translates to: LGSLLRGSDGPLILPGVIGAGSL*LPIPYK
Trigger: CTTGTAGGGGATAGGGAGGCAGAGAGAGCCAGCCCC...TATGACTCCTGGGAGAATCAAGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR CCA 90 bp GGGAGAGGTAGAACATTGGGATCTTTACTCAGAGGCTCAGATGGACCCTTGATTAGTGGAGGATGGAGCTaGGGCTTGGGCTCCTCTAGG +
Preference number: 2 (lower is better)
Translates to: GRGRTLGSLLRGSDGPLISGGWS*GLGSSR
Trigger: CCTAGAGGAGCCCAAGCCCCAGCTCCATCCTCCACT...AATCAAGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAATGTTCTACCTCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR CCA 90 bp GGACAGGGAGAGGTAGAACATTGGGATCTTTACTCAGAGGCTCAGATGGACCCTAGAATAAGTGGAGGATaGAGCTGGGGCTTGGGCTCC +
Preference number: 2 (lower is better)
Translates to: GQGEVEHWDLYSEAQMDPRISGG*SWGLGS
Trigger: GGAGCCCAAGCCCCAGCTCCATCCTCCACTTATTCT...AGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAATGTTCTACCTCTCCCTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR CCA 90 bp TTGGGATCTTTACTCAGAGGCTCAGATGGACCCTTGATTCTCCCAGGAGTCATACAGGCCATCAGGAGCTaGTTAGCCCCATTCCACCCC +
Preference number: 2 (lower is better)
Translates to: LGSLLRGSDGPLILPGVIQAIRS*LAPFHP
Trigger: GGGGTGGAATGGGGCTAACCAGCTCCTGATGGCCTG...TATGACTCCTGGGAGAATCAAGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR CCA 90 bp ATTGGGATCTTTACTCAGAGGCTCAGATGGACCCTTGATTCTCCCAGGAGTCATCAGGCCATCAGGAGCTaGTTAGCCCCATTCCACCCC +
Preference number: 2 (lower is better)
Translates to: IGIFTQRLRWTLDSPRSHQAIRS*LAPFHP
Trigger: GGGGTGGAATGGGGCTAACCAGCTCCTGATGGCCTG...ATGACTCCTGGGAGAATCAAGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR CCA 90 bp ATTGTCTTTGGGGGAAACAGGCAGAATAAGTGGAGGATGGAGCTGGGGCTTGGGTTCCATGGTGTCTGCTaGGTTCAGGGCAACTGGCTT +
Preference number: 2 (lower is better)
Translates to: IVFGGNRQNKWRMELGLGFHGVC*VQGNWL
Trigger: AAGCCAGTTGCCCTGAACCCAGCAGACACCATGGAA...CCCAAGCCCCAGCTCCATCCTCCACTTATTCTGCCTGTTTCCCCCAAAGACAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR CCA 90 bp TTGGGATCTTTACTCAGAGGCTCAGATGGACCCTTGATTCTCCCAGGAGTCATATCCTCCGCCTGGGGTTaGTGTGGAGCCCCTCACTTT +
Preference number: 2 (lower is better)
Translates to: LGSLLRGSDGPLILPGVISSAWG*CGAPHF
Trigger: AAAGTGAGGGGCTCCACACCAACCCCAGGCGGAGGA...TATGACTCCTGGGAGAATCAAGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
3UTR CAA 90 bp TCTGCCTCCCTATCCCCTACAAGAGGGACAGGGAGAGGTAGAACATaGGGATCTTTACTCAGAGGCTCAGATGGACCCTTGATTCTCCCA +
Preference number: 2 (lower is better)
Translates to: SASLSPTRGTGRGRT*GSLLRGSDGPLILP
Trigger: TGGGAGAATCAAGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAATGTTCTACCTCTCCCTGTCCCTCTTGTAGGGGATAGGGAGGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR GCA 90 bp ATAGTTTGTGGTTTTGCCATCTGTTACTCCTTATGCCCACCTGGAGAGGGGCTAGCGCAGTGCAGCCTGTaGCAGCTCCTCACAAGCAAA +
Preference number: 2 (lower is better)
Translates to: IVCGFAICYSLCPPGEGLAQCSL*QLLTSK
Trigger: TTTGCTTGTGAGGAGCTGGCACAGGCTGCACTGCGC...TAGCCCCTCTCCAGGTGGGCATAAGGAGTAACAGATGGCAAAACCACAAACTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR-3UTR GCA 90 bp AAAATAGTTTGTGGTTTTGCCATCTGTTACTCCTTATGCCCACCTGGAGAGGGGGGGCCGAATGTCAGCTaGTGCCTCCCCCAGAAAGCT +
Preference number: 2 (lower is better)
Translates to: KIVCGFAICYSLCPPGEGGPNVS*CLPQKA
Trigger: AGCTTTCTGGGGGAGGCAGCAGCTGACATTCGGCCC...CCCCTCTCCAGGTGGGCATAAGGAGTAACAGATGGCAAAACCACAAACTATTTT
52% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR-3UTR TCA 90 bp TTGGGATCTTTACTCAGAGGCTCAGATGGACCCTTGATTCTCCCAGGAGTCATAAGGCCTGGAAGACGCTaGGCAGATCCTTCATACCAG +
Preference number: 2 (lower is better)
Translates to: LGSLLRGSDGPLILPGVIRPGRR*ADPSYQ
Trigger: CTGGTATGAAGGATCTGCTCAGCGTCTTCCAGGCCT...TATGACTCCTGGGAGAATCAAGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR-3UTR GCA 90 bp TTACTCCTTATGCCCACCTGGAGAGGGGCTAGCATCTTTAGGTGGGACCACCCCGTACCATTTAATGCGTaGAAAGGACATTCCATGGTG +
Preference number: 2 (lower is better)
Translates to: LLLMPTWRGASIFRWDHPVPFNA*KGHSMV
Trigger: CACCATGGAATGTCCTTTGCACGCATTAAATGGTAC...GGGGTGGTCCCACCTAAAGATGCTAGCCCCTCTCCAGGTGGGCATAAGGAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR GCA 90 bp AAAATAGTTTGTGGTTTTGCCATCTGTTACTCCTTATGCCCACCTGGAGAGGGGATCGCTTACCCAGCATaGCCTTGTGCCTGCGCAGTG +
Preference number: 2 (lower is better)
Translates to: KIVCGFAICYSLCPPGEGIAYPA*PCACAV
Trigger: CACTGCGCAGGCACAAGGGCATGCTGGGTAAGCGAT...CCCCTCTCCAGGTGGGCATAAGGAGTAACAGATGGCAAAACCACAAACTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR-3UTR GCA 90 bp TGCTTCCGAGGCTTCAGTTCTGTACCATTTAATGCGTGCAAAGGACATTCCATGCTGCTGCACTTCGGCTaGAGTGCTCCGGAAGAGTTC +
Preference number: 2 (lower is better)
Translates to: CFRGFSSVPFNACKGHSMLLHFG*SAPEEF
Trigger: GAACTCTTCCGGAGCACTGCAGCCGAAGTGCAGCAG...CATGGAATGTCCTTTGCACGCATTAAATGGTACAGAACTGAAGCCTCGGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR-3UTR CCA 90 bp CATGGTGTCTGCTGGGTTCAGGGCAACTGGCTTTCCCAAGGCATACAAGAAAAGAGGGTGCTGGTCTTCTaGACTCAGGAGAGACATGTT +
Preference number: 2 (lower is better)
Translates to: HGVCWVQGNWLSQGIQEKRVLVF*TQERHV
Trigger: AACATGTCTCTCCTGAGTCCAGAAGACCAGCACCCT...CTTTTCTTGTATGCCTTGGGAAAGCCAGTTGCCCTGAACCCAGCAGACACCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR CCA 90 bp TTTACTCAGAGGCTCAGATGGACCCTTGATTCTCCCAGGAGTCATACATTGAAGGATGGAGCTGGGGCTTaGGCTCCTCTAGGTACCTTC +
Preference number: 2 (lower is better)
Translates to: FTQRLRWTLDSPRSHTLKDGAGA*APLGTF
Trigger: GAAGGTACCTAGAGGAGCCCAAGCCCCAGCTCCATC...CTTCAATGTATGACTCCTGGGAGAATCAAGGGTCCATCTGAGCCTCTGAGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR CCA 90 bp GGGAGAGGTAGAACATTGGGATCTTTACTCAGAGGCTCAGATGGACCCTTGATTAGAATAAGTGGAGGATaGAGCTGGGGCTTGGGCTCC +
Preference number: 2 (lower is better)
Translates to: GRGRTLGSLLRGSDGPLIRISGG*SWGLGS
Trigger: GGAGCCCAAGCCCCAGCTCCATCCTCCACTTATTCT...AATCAAGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAATGTTCTACCTCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR CCA 90 bp TTTACTCAGAGGCTCAGATGGACCCTTGATTCTCCCAGGAGTCATACATTGAAGCGATATCTGTCGGCATaGGCCACAGCCAGGACAGAC +
Preference number: 2 (lower is better)
Translates to: FTQRLRWTLDSPRSHTLKRYLSA*ATARTD
Trigger: GTCTGTCCTGGCTGTGGCCCATGCCGACAGATATCG...CTTCAATGTATGACTCCTGGGAGAATCAAGGGTCCATCTGAGCCTCTGAGTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR CCA 90 bp TGCTTCCGAGGCTTCAGTTCTGTACCATTTAATGCGTGCAAAGGACATTCCATGAAAGCAAGCCTGCCGTaGACCTGTCAGCCCCACGAT +
Preference number: 2 (lower is better)
Translates to: CFRGFSSVPFNACKGHSMKASLP*TCQPHD
Trigger: ATCGTGGGGCTGACAGGTCCACGGCAGGCTTGCTTT...CATGGAATGTCCTTTGCACGCATTAAATGGTACAGAACTGAAGCCTCGGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR CCA 90 bp TTACTCCTTATGCCCACCTGGAGAGGGGCTAGCATCTTTAGGTGGGACCACCCCGCATACAAGAAAAGTTaGCAGAAAGTCCTCCCCTTT +
Preference number: 2 (lower is better)
Translates to: LLLMPTWRGASIFRWDHPAYKKS*QKVLPF
Trigger: AAAGGGGAGGACTTTCTGCCAACTTTTCTTGTATGC...GGGGTGGTCCCACCTAAAGATGCTAGCCCCTCTCCAGGTGGGCATAAGGAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR TCA 90 bp TTTACTCAGAGGCTCAGATGGACCCTTGATTCTCCCAGGAGTCATACATTGAAGCACTTGGTCTTCCCGTaGCAAGAAACGAGCCACCTC +
Preference number: 2 (lower is better)
Translates to: FTQRLRWTLDSPRSHTLKHLVFP*QETSHL
Trigger: GAGGTGGCTCGTTTCTTGTCACGGGAAGACCAAGTG...CTTCAATGTATGACTCCTGGGAGAATCAAGGGTCCATCTGAGCCTCTGAGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR-3UTR GCA 90 bp TGGACCCTTGATTCTCCCAGGAGTCATACATTGAAGGTACCAGAGCTTCCATTTAAAAGAAAGCAAGCCTaGCGTGGACCTGTCAGCCCC +
Preference number: 2 (lower is better)
Translates to: WTLDSPRSHTLKVPELPFKRKQA*RGPVSP
Trigger: GGGGCTGACAGGTCCACGGCAGGCTTGCTTTCTTTT...AAATGGAAGCTCTGGTACCTTCAATGTATGACTCCTGGGAGAATCAAGGGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR GCA 90 bp TTGGGATCTTTACTCAGAGGCTCAGATGGACCCTTGATTCTCCCAGGAGTCATAACATTCCATGGTGTCTaGTGGGTTCAGGGCAACTGG +
Preference number: 2 (lower is better)
Translates to: LGSLLRGSDGPLILPGVITFHGV*WVQGNW
Trigger: CCAGTTGCCCTGAACCCAGCAGACACCATGGAATGT...TATGACTCCTGGGAGAATCAAGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR CCA 90 bp TTGGGATCTTTACTCAGAGGCTCAGATGGACCCTTGATTCTCCCAGGAGTCATAGCCGAGGATATCAGCTaGCTCTTACCTCCTGGCTTT +
Preference number: 2 (lower is better)
Translates to: LGSLLRGSDGPLILPGVIAEDIS*LLPPGF
Trigger: AAAGCCAGGAGGTAAGAGCCAGCTGATATCCTCGGC...TATGACTCCTGGGAGAATCAAGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR CCA 90 bp CGAGGCTTCAGTTCTGTACCATTTAATGCGTGCAAAGGACATTCCATGGTGTCTAGAATAAGTGGAGGATaGAGCTGGGGCTTGGGCTCC +
Preference number: 2 (lower is better)
Translates to: RGFSSVPFNACKGHSMVSRISGG*SWGLGS
Trigger: GGAGCCCAAGCCCCAGCTCCATCCTCCACTTATTCT...AGACACCATGGAATGTCCTTTGCACGCATTAAATGGTACAGAACTGAAGCCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR CCA 90 bp CCAAATTGCTTCCGAGGCTTCAGTTCTGTACCATTTAATGCGTGCAAAGGACATAGGTGGGACCACCCCTaGCACAACATGGTCTCTGAG +
Preference number: 2 (lower is better)
Translates to: PNCFRGFSSVPFNACKGHRWDHP*HNMVSE
Trigger: CTCAGAGACCATGTTGTGCCAGGGGTGGTCCCACCT...ATGTCCTTTGCACGCATTAAATGGTACAGAACTGAAGCCTCGGAAGCAATTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
3UTR-3UTR CCA 90 bp TTGGGATCTTTACTCAGAGGCTCAGATGGACCCTTGATTCTCCCAGGAGTCATAGCAAAGGACATTCCATaGTGTCTGCTGGGTTCAGGG +
Preference number: 2 (lower is better)
Translates to: LGSLLRGSDGPLILPGVIAKDIP*CLLGSG
Trigger: CCCTGAACCCAGCAGACACCATGGAATGTCCTTTGC...TATGACTCCTGGGAGAATCAAGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR TCA 90 bp AGTCATACATTGAAGGTACCAGAGCTTCCATTTTATAAAAGAAAGCAAGCCTGCCCGTCTCCGTGGGAATaGGCGTTGGGGTGGCTTGGA +
Preference number: 2 (lower is better)
Translates to: SHTLKVPELPFYKRKQACPSPWE*ALGWLG
Trigger: TCCAAGCCACCCCAACGCTCATTCCCACGGAGACGG...GCAGGCTTGCTTTCTTTTATAAAATGGAAGCTCTGGTACCTTCAATGTATGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR-3UTR CCA 90 bp CGAGGCTTCAGTTCTGTACCATTTAATGCGTGCAAAGGACATTCCATGGTGTCTGCCGAGGATATCAGCTaGCTCTTACCTCCTGGCTTT +
Preference number: 2 (lower is better)
Translates to: RGFSSVPFNACKGHSMVSAEDIS*LLPPGF
Trigger: AAAGCCAGGAGGTAAGAGCCAGCTGATATCCTCGGC...AGACACCATGGAATGTCCTTTGCACGCATTAAATGGTACAGAACTGAAGCCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR CCA 90 bp TGCTTCCGAGGCTTCAGTTCTGTACCATTTAATGCGTGCAAAGGACATTCCATGCTCCTTATGCCCACCTaGAGAGGGGCTAGCATCTTT +
Preference number: 2 (lower is better)
Translates to: CFRGFSSVPFNACKGHSMLLMPT*RGASIF
Trigger: AAAGATGCTAGCCCCTCTCCAGGTGGGCATAAGGAG...CATGGAATGTCCTTTGCACGCATTAAATGGTACAGAACTGAAGCCTCGGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR CCA 90 bp CCCAGGAGTCATACATTGAAGGTACCAGAGCTTCCATTTTATAAAAGAAAGCAAGAGTGTTCCTCCGCCTaGGGTTGGTGTGGAGCCCCT +
Preference number: 2 (lower is better)
Translates to: PRSHTLKVPELPFYKRKQECSSA*GWCGAP
Trigger: AGGGGCTCCACACCAACCCCAGGCGGAGGAACACTC...TTGCTTTCTTTTATAAAATGGAAGCTCTGGTACCTTCAATGTATGACTCCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
3UTR-3UTR CCA 90 bp ATAGTTTGTGGTTTTGCCATCTGTTACTCCTTATGCCCACCTGGAGAGGGGCTAAGCCGCAGGATCACTTaGTCTTCCCGTGACAAGAAA +
Preference number: 2 (lower is better)
Translates to: IVCGFAICYSLCPPGEGLSRRIT*SSRDKK
Trigger: TTTCTTGTCACGGGAAGACCAAGTGATCCTGCGGCT...TAGCCCCTCTCCAGGTGGGCATAAGGAGTAACAGATGGCAAAACCACAAACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR-3UTR CCA 90 bp CCCAGGAGTCATACATTGAAGGTACCAGAGCTTCCATTTTATAAAAGAAAGCAAGGTACCCCCAGTCACTaGGCACTCTGGCCCCAGGAA +
Preference number: 2 (lower is better)
Translates to: PRSHTLKVPELPFYKRKQGTPSH*ALWPQE
Trigger: TTCCTGGGGCCAGAGTGCCCAGTGACTGGGGGTACC...TTGCTTTCTTTTATAAAATGGAAGCTCTGGTACCTTCAATGTATGACTCCTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR-3UTR TCA 90 bp CCAAATTGCTTCCGAGGCTTCAGTTCTGTACCATTTAATGCGTGCAAAGGACATGCTCAGATGGACCCTTaGTTCTCCCAGGAGTCATAC +
Preference number: 2 (lower is better)
Translates to: PNCFRGFSSVPFNACKGHAQMDP*FSQESY
Trigger: GTATGACTCCTGGGAGAATCAAGGGTCCATCTGAGC...ATGTCCTTTGCACGCATTAAATGGTACAGAACTGAAGCCTCGGAAGCAATTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
3UTR-3UTR CCA 90 bp AGTCATACATTGAAGGTACCAGAGCTTCCATTTTATAAAAGAAAGCAAGCCTGCAGTGGAGGATGGAGCTaGGGCTTGGGCTCCTCTAGG +
Preference number: 2 (lower is better)
Translates to: SHTLKVPELPFYKRKQACSGGWS*GLGSSR
Trigger: CCTAGAGGAGCCCAAGCCCCAGCTCCATCCTCCACT...GCAGGCTTGCTTTCTTTTATAAAATGGAAGCTCTGGTACCTTCAATGTATGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR CCA 90 bp TTTACTCAGAGGCTCAGATGGACCCTTGATTCTCCCAGGAGTCATACATTGAAGAACAGGCAGAATAAGTaGAGGATGGAGCTGGGGCTT +
Preference number: 2 (lower is better)
Translates to: FTQRLRWTLDSPRSHTLKNRQNK*RMELGL
Trigger: AAGCCCCAGCTCCATCCTCCACTTATTCTGCCTGTT...CTTCAATGTATGACTCCTGGGAGAATCAAGGGTCCATCTGAGCCTCTGAGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR CCA 90 bp AAAATAGTTTGTGGTTTTGCCATCTGTTACTCCTTATGCCCACCTGGAGAGGGGAACAGGCAGAATAAGTaGAGGATGGAGCTGGGGCTT +
Preference number: 2 (lower is better)
Translates to: KIVCGFAICYSLCPPGEGNRQNK*RMELGL
Trigger: AAGCCCCAGCTCCATCCTCCACTTATTCTGCCTGTT...CCCCTCTCCAGGTGGGCATAAGGAGTAACAGATGGCAAAACCACAAACTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR CCA 90 bp TGGACCCTTGATTCTCCCAGGAGTCATACATTGAAGGTACCAGAGCTTCCATTTTGGGTTCAGGGCAACTaGCTTTCCCAAGGCATACAA +
Preference number: 2 (lower is better)
Translates to: WTLDSPRSHTLKVPELPFWVQGN*LSQGIQ
Trigger: TTGTATGCCTTGGGAAAGCCAGTTGCCCTGAACCCA...AAATGGAAGCTCTGGTACCTTCAATGTATGACTCCTGGGAGAATCAAGGGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR TCA 90 bp TGCTTCCGAGGCTTCAGTTCTGTACCATTTAATGCGTGCAAAGGACATTCCATGCCTAATGTCTTCTGGTaGTACTGCAGCACAGTCCAT +
Preference number: 2 (lower is better)
Translates to: CFRGFSSVPFNACKGHSMPNVFW*YCSTVH
Trigger: ATGGACTGTGCTGCAGTATCACCAGAAGACATTAGG...CATGGAATGTCCTTTGCACGCATTAAATGGTACAGAACTGAAGCCTCGGAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR CCA 90 bp CCCAGGAGTCATACATTGAAGGTACCAGAGCTTCCATTTTATAAAAGAAAGCAAGATGGAGCTGGGGCTTaGGCTCCTCTAGGTACCTTC +
Preference number: 2 (lower is better)
Translates to: PRSHTLKVPELPFYKRKQDGAGA*APLGTF
Trigger: GAAGGTACCTAGAGGAGCCCAAGCCCCAGCTCCATC...TTGCTTTCTTTTATAAAATGGAAGCTCTGGTACCTTCAATGTATGACTCCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR GCA 90 bp CCCAGGAGTCATACATTGAAGGTACCAGAGCTTCCATTTTATAAAAGAAAGCAATGTGTGGGGGCCTACTaGCCCCTAATGTCTTCTGGT +
Preference number: 2 (lower is better)
Translates to: PRSHTLKVPELPFYKRKQCVGAY*PLMSSG
Trigger: ACCAGAAGACATTAGGGGGCAGTAGGCCCCCACACA...TTGCTTTCTTTTATAAAATGGAAGCTCTGGTACCTTCAATGTATGACTCCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR CCA 90 bp TGCTTCCGAGGCTTCAGTTCTGTACCATTTAATGCGTGCAAAGGACATTCCATGGGAGAGGTAGAACATTaGGATCTTTACTCAGAGGCT +
Preference number: 2 (lower is better)
Translates to: CFRGFSSVPFNACKGHSMGEVEH*DLYSEA
Trigger: AGCCTCTGAGTAAAGATCCCAATGTTCTACCTCTCC...CATGGAATGTCCTTTGCACGCATTAAATGGTACAGAACTGAAGCCTCGGAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR GCA 90 bp TTGGGATCTTTACTCAGAGGCTCAGATGGACCCTTGATTCTCCCAGGAGTCATAAACCTTTTATGGGAGTaGAGTGCTCCTTACACAAAT +
Preference number: 2 (lower is better)
Translates to: LGSLLRGSDGPLILPGVINLLWE*SAPYTN
Trigger: ATTTGTGTAAGGAGCACTGCACTCCCATAAAAGGTT...TATGACTCCTGGGAGAATCAAGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
3UTR-3UTR CCA 90 bp CCCAGGAGTCATACATTGAAGGTACCAGAGCTTCCATTTTATAAAAGAAAGCAAGCAAAGGACATTCCATaGTGTCTGCTGGGTTCAGGG +
Preference number: 2 (lower is better)
Translates to: PRSHTLKVPELPFYKRKQAKDIP*CLLGSG
Trigger: CCCTGAACCCAGCAGACACCATGGAATGTCCTTTGC...TTGCTTTCTTTTATAAAATGGAAGCTCTGGTACCTTCAATGTATGACTCCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR CCA 90 bp CCCAGGAGTCATACATTGAAGGTACCAGAGCTTCCATTTTATAAAAGAAAGCAAAGGGTGCTGGTCTTCTaGACTCAGGAGAGACATGTT +
Preference number: 2 (lower is better)
Translates to: PRSHTLKVPELPFYKRKQRVLVF*TQERHV
Trigger: AACATGTCTCTCCTGAGTCCAGAAGACCAGCACCCT...TTGCTTTCTTTTATAAAATGGAAGCTCTGGTACCTTCAATGTATGACTCCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR GCA 90 bp CGAGGCTTCAGTTCTGTACCATTTAATGCGTGCAAAGGACATTCCATGGTGTCTAATAGTTTGTGGTTTTaGCATCTGTTACTCCTTATG +
Preference number: 2 (lower is better)
Translates to: RGFSSVPFNACKGHSMVSNSLWF*HLLLLM
Trigger: CATAAGGAGTAACAGATGGCAAAACCACAAACTATT...AGACACCATGGAATGTCCTTTGCACGCATTAAATGGTACAGAACTGAAGCCTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR GCA 90 bp CCCAGGAGTCATACATTGAAGGTACCAGAGCTTCCATTTTATAAAAGAAAGCAAGATCGAGTTCCAAATTaGTTCCGAGGCTTCAGTTCT +
Preference number: 2 (lower is better)
Translates to: PRSHTLKVPELPFYKRKQDRVPN*FRGFSS
Trigger: AGAACTGAAGCCTCGGAAGCAATTTGGAACTCGATC...TTGCTTTCTTTTATAAAATGGAAGCTCTGGTACCTTCAATGTATGACTCCTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
3UTR-3UTR GCA 90 bp CCCAGGAGTCATACATTGAAGGTACCAGAGCTTCCATTTTATAAAAGAAAGCAAGTACCATTTAATGCGTaGAAAGGACATTCCATGGTG +
Preference number: 2 (lower is better)
Translates to: PRSHTLKVPELPFYKRKQVPFNA*KGHSMV
Trigger: CACCATGGAATGTCCTTTGCACGCATTAAATGGTAC...TTGCTTTCTTTTATAAAATGGAAGCTCTGGTACCTTCAATGTATGACTCCTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR CCA 90 bp AGTCATACATTGAAGGTACCAGAGCTTCCATTTTATAAAAGAAAGCAAGCCTGCGCATACAAGAAAAGTTaGCAGAAAGTCCTCCCCTTT +
Preference number: 2 (lower is better)
Translates to: SHTLKVPELPFYKRKQACAYKKS*QKVLPF
Trigger: AAAGGGGAGGACTTTCTGCCAACTTTTCTTGTATGC...GCAGGCTTGCTTTCTTTTATAAAATGGAAGCTCTGGTACCTTCAATGTATGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR CCA 72 bp TGGGCACTCTGGCCCCAGGAAGCCAAGCACGTCCGTTaGCCCAGCCGAGAAGGGCAGTCCCCGCAGCCGCAG +
Preference number: 3 (lower is better)
Translates to: WALWPQEAKHVR*PSREGQSPQPQ
Trigger: CTGCGGCTGCGGGGACTGCCCTTCTCGGCTGGGCCAACGGACGTGCTTGGCTTCCTGGGGCCAGAGTGCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR CCA 72 bp GGCCGGCCCTGCTGGTTGAGCACCATGTGTACACCGTaGGGCCGAATGTCAGCTGCTGCCTCCCCCAGAAAG +
Preference number: 3 (lower is better)
Translates to: GRPCWLSTMCTP*GRMSAAASPRK
Trigger: CTTTCTGGGGGAGGCAGCAGCTGACATTCGGCCCCACGGTGTACACATGGTGCTCAACCAGCAGGGCCGGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR CCA 72 bp GCCGTGGACCTGTCAGCCCCACGATATCTGTCGGCATaGGCCACAGCCAGGACAGACTTAAGGGCTCTCCAG +
Preference number: 3 (lower is better)
Translates to: AVDLSAPRYLSA*ATARTDLRALQ
Trigger: CTGGAGAGCCCTTAAGTCTGTCCTGGCTGTGGCCCATGCCGACAGATATCGTGGGGCTGACAGGTCCACGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR CCA 72 bp CTGCTGCCTCCCCCAGAAAGCTCAGGATGTCTTCAATaGTGGCCGTGTAGGGCAGGCCTCGGAGGCGTACAC +
Preference number: 3 (lower is better)
Translates to: LLPPPESSGCLQ*WPCRAGLGGVH
Trigger: GTGTACGCCTCCGAGGCCTGCCCTACACGGCCACCATTGAAGACATCCTGAGCTTTCTGGGGGAGGCAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR GCA 72 bp GTATCGCTTACCCAGCATGCCCTTGTGCCTGCGCAGTaGAGCCTGTGCCAGCTCCTCACAAGCAAAGAGGGC +
Preference number: 3 (lower is better)
Translates to: VSLTQHALVPAQ*SLCQLLTSKEG
Trigger: GCCCTCTTTGCTTGTGAGGAGCTGGCACAGGCTGCACTGCGCAGGCACAAGGGCATGCTGGGTAAGCGATAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR GCA 72 bp CAGTGGGGCAGTCAGTGTAGGAAGGAGTGGGCCGGATaGATAGCGGTTCAAGACCTGCTGCACTTCGGCTGC +
Preference number: 3 (lower is better)
Translates to: QWGSQCRKEWAG*IAVQDLLHFGC
Trigger: GCAGCCGAAGTGCAGCAGGTCTTGAACCGCTATGCATCCGGCCCACTCCTTCCTACACTGACTGCCCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR CCA 72 bp GCCGAGAAGGGCAGTCCCCGCAGCCGCAGGATCACTTaGTCTTCCCGTGACAAGAAACGAGCCACCTCTAGT +
Preference number: 3 (lower is better)
Translates to: AEKGSPRSRRIT*SSRDKKRATSS
Trigger: ACTAGAGGTGGCTCGTTTCTTGTCACGGGAAGACCAAGTGATCCTGCGGCTGCGGGGACTGCCCTTCTCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR CCA 72 bp GATGGGCAGCAGTGGGGCAGTCAGTGTAGGAAGGAGTaGGCCGGATGCATAGCGGTTCAAGACCTGCTGCAC +
Preference number: 3 (lower is better)
Translates to: DGQQWGSQCRKE*AGCIAVQDLLH
Trigger: GTGCAGCAGGTCTTGAACCGCTATGCATCCGGCCCACTCCTTCCTACACTGACTGCCCCACTGCTGCCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR CCA 72 bp CTGCCTCCCCCAGAAAGCTCAGGATGTCTTCAATGGTaGCCGTGTAGGGCAGGCCTCGGAGGCGTACACAGT +
Preference number: 3 (lower is better)
Translates to: LPPPESSGCLQW*PCRAGLGGVHS
Trigger: ACTGTGTACGCCTCCGAGGCCTGCCCTACACGGCCACCATTGAAGACATCCTGAGCTTTCTGGGGGAGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR CCA 72 bp GGCTGTGTAGTTCAGGTAGAGTTGAGTGGCTGGCCCTaGATAGTAGGCAACAGGGGTGGGGGCAGCAGGCAC +
Preference number: 3 (lower is better)
Translates to: GCVVQVELSGWP*IVGNRGGGSRH
Trigger: GTGCCTGCTGCCCCCACCCCTGTTGCCTACTATCCAGGGCCAGCCACTCAACTCTACCTGAACTACACAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR-3UTR CAA 90 bp AGATGCCTGGCTCAGGCCATCAGGAGCTGGTTAGCCCCATTCCACCCCCAGCCCGTCCAGCCATTGTCTTaGGGGGAAACAGGCAGAATA +
Preference number: 3 (lower is better)
Translates to: RCLAQAIRSWLAPFHPQPVQPLS*GETGRI
Trigger: TATTCTGCCTGTTTCCCCCAAAGACAATGGCTGGAC...GGGCTGGGGGTGGAATGGGGCTAACCAGCTCCTGATGGCCTGAGCCAGGCATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR GCA 72 bp GATCCTTCATACCAGCCGTGTATGGGACACCCTGCATaGGGACCAAGGCTCCTGACTGGGACAACACTGAGG +
Preference number: 3 (lower is better)
Translates to: DPSYQPCMGHPA*GPRLLTGTTLR
Trigger: CCTCAGTGTTGTCCCAGTCAGGAGCCTTGGTCCGCATGCAGGGTGTCCCATACACGGCTGGTATGAAGGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR CCA 72 bp GTAGTAGGCTGTGTAGTTCAGGTAGAGTTGAGTGGCTaGCCCTGGATAGTAGGCAACAGGGGTGGGGGCAGC +
Preference number: 3 (lower is better)
Translates to: VVGCVVQVELSG*PWIVGNRGGGS
Trigger: GCTGCCCCCACCCCTGTTGCCTACTATCCAGGGCCAGCCACTCAACTCTACCTGAACTACACAGCCTACTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR CCA 72 bp ACACAGTGCGAGGTGGGTCACCAACAGGCATCAGACTaGTGTAGTCATCAGCGGGTAGCTGGTAGGCCTGGA +
Preference number: 3 (lower is better)
Translates to: TQCEVGHQQASD*CSHQRVAGRPG
Trigger: TCCAGGCCTACCAGCTACCCGCTGATGACTACACCAGTCTGATGCCTGTTGGTGACCCACCTCGCACTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR TCA 72 bp AGTCATCAGCGGGTAGCTGGTAGGCCTGGAAGACGCTaGGCAGATCCTTCATACCAGCCGTGTATGGGACAC +
Preference number: 3 (lower is better)
Translates to: SHQRVAGRPGRR*ADPSYQPCMGH
Trigger: GTGTCCCATACACGGCTGGTATGAAGGATCTGCTCAGCGTCTTCCAGGCCTACCAGCTACCCGCTGATGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR GCA 72 bp GAGCACCATGTGTACACCGTGGGGCCGAATGTCAGCTaGTGCCTCCCCCAGAAAGCTCAGGATGTCTTCAAT +
Preference number: 3 (lower is better)
Translates to: EHHVYTVGPNVS*CLPQKAQDVFN
Trigger: ATTGAAGACATCCTGAGCTTTCTGGGGGAGGCAGCAGCTGACATTCGGCCCCACGGTGTACACATGGTGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR GCA 72 bp AGCAGATCCTTCATACCAGCCGTGTATGGGACACCCTaGATGCGGACCAAGGCTCCTGACTGGGACAACACT +
Preference number: 3 (lower is better)
Translates to: SRSFIPAVYGTP*MRTKAPDWDNT
Trigger: AGTGTTGTCCCAGTCAGGAGCCTTGGTCCGCATGCAGGGTGTCCCATACACGGCTGGTATGAAGGATCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR CCA 72 bp TTGGGTAGTAGGCTGTGTAGTTCAGGTAGAGTTGAGTaGCTGGCCCTGGATAGTAGGCAACAGGGGTGGGGG +
Preference number: 3 (lower is better)
Translates to: LGSRLCSSGRVE*LALDSRQQGWG
Trigger: CCCCCACCCCTGTTGCCTACTATCCAGGGCCAGCCACTCAACTCTACCTGAACTACACAGCCTACTACCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR-3UTR CAA 90 bp TTACTCCTTATGCCCACCTGGAGAGGGGCTAGCATCTTTAGGTGGGACCACCCCAAAGAAGCTACCAGGTaGAGGGTGCTGGTCTTCTGG +
Preference number: 3 (lower is better)
Translates to: LLLMPTWRGASIFRWDHPKEATR*RVLVFW
Trigger: CCAGAAGACCAGCACCCTCAACCTGGTAGCTTCTTT...GGGGTGGTCCCACCTAAAGATGCTAGCCCCTCTCCAGGTGGGCATAAGGAGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR CAA 90 bp ATTGGGATCTTTACTCAGAGGCTCAGATGGACCCTTGATTCTCCCAGGAGTCATAGCCAAGCACGTCCGTaGGCCCAGCCGAGAAGGGCA +
Preference number: 3 (lower is better)
Translates to: IGIFTQRLRWTLDSPRSHSQARP*AQPRRA
Trigger: TGCCCTTCTCGGCTGGGCCAACGGACGTGCTTGGCT...ATGACTCCTGGGAGAATCAAGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR CCA 72 bp TTGGGGGAAACAGGCAGAATAAGTGGAGGATGGAGCTaGGGCTTGGGCTCCTCTAGGTACCTTCTGAGAGCT +
Preference number: 3 (lower is better)
Translates to: LGETGRISGGWS*GLGSSRYLLRA
Trigger: AGCTCTCAGAAGGTACCTAGAGGAGCCCAAGCCCCAGCTCCATCCTCCACTTATTCTGCCTGTTTCCCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR CAA 90 bp GGACAGGGAGAGGTAGAACATTGGGATCTTTACTCAGAGGCTCAGATGGACCCTTGCAGGGTCCAGCCATaGTCTTTGGGGGAAACAGGC +
Preference number: 3 (lower is better)
Translates to: GQGEVEHWDLYSEAQMDPCRVQP*SLGETG
Trigger: GCCTGTTTCCCCCAAAGACAATGGCTGGACCCTGCA...AGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAATGTTCTACCTCTCCCTGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR GCA 72 bp ACAAACACACCCATTCCTTGGGGGCTTGTAACACAGTaGGAGGTGGGTCACCAACAGGCATCAGACTGGTGT +
Preference number: 3 (lower is better)
Translates to: TNTPIPWGLVTQ*EVGHQQASDWC
Trigger: ACACCAGTCTGATGCCTGTTGGTGACCCACCTCGCACTGTGTTACAAGCCCCCAAGGAATGGGTGTGTTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR CCA 72 bp TTGTGGTTTTGCCATCTGTTACTCCTTATGCCCACCTaGAGAGGGGCTAGCATCTTTAGGTGGGACCACCCC +
Preference number: 3 (lower is better)
Translates to: LWFCHLLLLMPT*RGASIFRWDHP
Trigger: GGGGTGGTCCCACCTAAAGATGCTAGCCCCTCTCCAGGTGGGCATAAGGAGTAACAGATGGCAAAACCACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR CCA 72 bp AACAGTATCCTTAATCTGTCTGAGTGTTCCTCCGCCTaGGGTTGGTGTGGAGCCCCTCACTTTGGGGCAAAG +
Preference number: 3 (lower is better)
Translates to: NSILNLSECSSA*GWCGAPHFGAK
Trigger: CTTTGCCCCAAAGTGAGGGGCTCCACACCAACCCCAGGCGGAGGAACACTCAGACAGATTAAGGATACTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
3UTR-3UTR CAA 90 bp TGGAAGACGCTGAGCAGATCCTTCATACCAGCCGTGTATGGGACACCCTGCATGGGGAGAGGTAGAACATaGGGATCTTTACTCAGAGGC +
Preference number: 3 (lower is better)
Translates to: WKTLSRSFIPAVYGTPCMGRGRT*GSLLRG
Trigger: GCCTCTGAGTAAAGATCCCAATGTTCTACCTCTCCC...CATGCAGGGTGTCCCATACACGGCTGGTATGAAGGATCTGCTCAGCGTCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR CCA 72 bp CAGAAAGAAGCTACCAGGTTGAGGGTGCTGGTCTTCTaGACTCAGGAGAGACATGTTCGCCGAGGATATCAG +
Preference number: 3 (lower is better)
Translates to: QKEATRLRVLVF*TQERHVRRGYQ
Trigger: CTGATATCCTCGGCGAACATGTCTCTCCTGAGTCCAGAAGACCAGCACCCTCAACCTGGTAGCTTCTTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR CAA 90 bp CCCAGGAGTCATACATTGAAGGTACCAGAGCTTCCATTTTATAAAAGAAAGCAAGGCCGGCCCTGCTGGTaGAGCACCATGTGTACACCG +
Preference number: 3 (lower is better)
Translates to: PRSHTLKVPELPFYKRKQGRPCW*STMCTP
Trigger: CGGTGTACACATGGTGCTCAACCAGCAGGGCCGGCC...TTGCTTTCTTTTATAAAATGGAAGCTCTGGTACCTTCAATGTATGACTCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR CCA 72 bp AGGACATTCCATGGTGTCTGCTGGGTTCAGGGCAACTaGCTTTCCCAAGGCATACAAGAAAAGTTGGCAGAA +
Preference number: 3 (lower is better)
Translates to: RTFHGVCWVQGN*LSQGIQEKLAE
Trigger: TTCTGCCAACTTTTCTTGTATGCCTTGGGAAAGCCAGTTGCCCTGAACCCAGCAGACACCATGGAATGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR CCA 72 bp GTTCTGTACCATTTAATGCGTGCAAAGGACATTCCATaGTGTCTGCTGGGTTCAGGGCAACTGGCTTTCCCA +
Preference number: 3 (lower is better)
Translates to: VLYHLMRAKDIP*CLLGSGQLAFP
Trigger: TGGGAAAGCCAGTTGCCCTGAACCCAGCAGACACCATGGAATGTCCTTTGCACGCATTAAATGGTACAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR CAA 90 bp GGACAGGGAGAGGTAGAACATTGGGATCTTTACTCAGAGGCTCAGATGGACCCTTACCTTCTGAGAGCTTaGACAAGCCAGAAAGAAGCT +
Preference number: 3 (lower is better)
Translates to: GQGEVEHWDLYSEAQMDPYLLRA*TSQKEA
Trigger: AGCTTCTTTCTGGCTTGTCAAAGCTCTCAGAAGGTA...AGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAATGTTCTACCTCTCCCTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR CAA 90 bp CATGGTGTCTGCTGGGTTCAGGGCAACTGGCTTTCCCAAGGCATACAAGAAAAGTACCTTCTGAGAGCTTaGACAAGCCAGAAAGAAGCT +
Preference number: 3 (lower is better)
Translates to: HGVCWVQGNWLSQGIQEKYLLRA*TSQKEA
Trigger: AGCTTCTTTCTGGCTTGTCAAAGCTCTCAGAAGGTA...CTTTTCTTGTATGCCTTGGGAAAGCCAGTTGCCCTGAACCCAGCAGACACCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR CAA 90 bp ATTGTCTTTGGGGGAAACAGGCAGAATAAGTGGAGGATGGAGCTGGGGCTTGGGGTCCATCAAAATAGTTaGTGGTTTTGCCATCTGTTA +
Preference number: 3 (lower is better)
Translates to: IVFGGNRQNKWRMELGLGVHQNS*WFCHLL
Trigger: TAACAGATGGCAAAACCACAAACTATTTTGATGGAC...CCCAAGCCCCAGCTCCATCCTCCACTTATTCTGCCTGTTTCCCCCAAAGACAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR TCA 72 bp CATTGGGATCTTTACTCAGAGGCTCAGATGGACCCTTaGTTCTCCCAGGAGTCATACATTGAAGGTACCAGA +
Preference number: 3 (lower is better)
Translates to: HWDLYSEAQMDP*FSQESYIEGTR
Trigger: TCTGGTACCTTCAATGTATGACTCCTGGGAGAATCAAGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR GCA 72 bp TACTGCAGCACAGTCCATCAAAATAGTTTGTGGTTTTaGCATCTGTTACTCCTTATGCCCACCTGGAGAGGG +
Preference number: 3 (lower is better)
Translates to: YCSTVHQNSLWF*HLLLLMPTWRG
Trigger: CCCTCTCCAGGTGGGCATAAGGAGTAACAGATGGCAAAACCACAAACTATTTTGATGGACTGTGCTGCAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR CAA 90 bp AAAATAGTTTGTGGTTTTGCCATCTGTTACTCCTTATGCCCACCTGGAGAGGGGTACCTTCTGAGAGCTTaGACAAGCCAGAAAGAAGCT +
Preference number: 3 (lower is better)
Translates to: KIVCGFAICYSLCPPGEGYLLRA*TSQKEA
Trigger: AGCTTCTTTCTGGCTTGTCAAAGCTCTCAGAAGGTA...CCCCTCTCCAGGTGGGCATAAGGAGTAACAGATGGCAAAACCACAAACTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR CAA 90 bp TCTGGTGATACTGCAGCACAGTCCATCAAAATAGTTTGTGGTTTTGCCATCTGTGGGAGAGGTAGAACATaGGGATCTTTACTCAGAGGC +
Preference number: 3 (lower is better)
Translates to: SGDTAAQSIKIVCGFAICGRGRT*GSLLRG
Trigger: GCCTCTGAGTAAAGATCCCAATGTTCTACCTCTCCC...ACAGATGGCAAAACCACAAACTATTTTGATGGACTGTGCTGCAGTATCACCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR CAA 90 bp CCCAGGAGTCATACATTGAAGGTACCAGAGCTTCCATTTTATAAAAGAAAGCAAAAAGAAGCTACCAGGTaGAGGGTGCTGGTCTTCTGG +
Preference number: 3 (lower is better)
Translates to: PRSHTLKVPELPFYKRKQKEATR*RVLVFW
Trigger: CCAGAAGACCAGCACCCTCAACCTGGTAGCTTCTTT...TTGCTTTCTTTTATAAAATGGAAGCTCTGGTACCTTCAATGTATGACTCCTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR CAA 90 bp CCCAGGAGTCATACATTGAAGGTACCAGAGCTTCCATTTTATAAAAGAAAGCAAAAACACACCCATTCCTaGGGGGCTTGTAACACAGTG +
Preference number: 3 (lower is better)
Translates to: PRSHTLKVPELPFYKRKQKHTHS*GACNTV
Trigger: CACTGTGTTACAAGCCCCCAAGGAATGGGTGTGTTT...TTGCTTTCTTTTATAAAATGGAAGCTCTGGTACCTTCAATGTATGACTCCTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000566774.1
3UTR-3UTR CAA 90 bp CCCAGGAGTCATACATTGAAGGTACCAGAGCTTCCATTTTATAAAAGAAAGCAAGGCATACAAGAAAAGTaGGCAGAAAGTCCTCCCCTT +
Preference number: 3 (lower is better)
Translates to: PRSHTLKVPELPFYKRKQGIQEK*AESPPL
Trigger: AAGGGGAGGACTTTCTGCCAACTTTTCTTGTATGCC...TTGCTTTCTTTTATAAAATGGAAGCTCTGGTACCTTCAATGTATGACTCCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR-3UTR CAA 90 bp CCCAGGAGTCATACATTGAAGGTACCAGAGCTTCCATTTTATAAAAGAAAGCAAAGATCGAGTTCCAAATaGCTTCCGAGGCTTCAGTTC +
Preference number: 3 (lower is better)
Translates to: PRSHTLKVPELPFYKRKQRSSSK*LPRLQF
Trigger: GAACTGAAGCCTCGGAAGCAATTTGGAACTCGATCT...TTGCTTTCTTTTATAAAATGGAAGCTCTGGTACCTTCAATGTATGACTCCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
3UTR CAA 72 bp CTGGGCACTCTGGCCCCAGGAAGCCAAGCACGTCCGTaGGCCCAGCCGAGAAGGGCAGTCCCCGCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: LGTLAPGSQARP*AQPRRAVPAAA
Trigger: TGCGGCTGCGGGGACTGCCCTTCTCGGCTGGGCCAACGGACGTGCTTGGCTTCCTGGGGCCAGAGTGCCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566774.1
CDS-3UTR CCA 90 bp AGATGCCTGGCTCAGGCCATCAGGAGCTGGTTAGCCCCATTCCACCCCCAGCCCGCCAAGCACGTCCGTTaGCCCAGCCGAGAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: RCLAQAIRSWLAPFHPQPAKHVR*PSREGQ
Trigger: CTGCCCTTCTCGGCTGGGCCAACGGACGTGCTTGGC...GGGCTGGGGGTGGAATGGGGCTAACCAGCTCCTGATGGCCTGAGCCAGGCATCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp ATGGGCCACAGCCAGGACAGACTTAAGGGCTCTCCAGGTGCCAGTCAAGATGCCCTTGTCCAGCGGCTCTaGCCGCGCCAGGCTGTCGGC +
Preference number: 4 (lower is better)
Translates to: MGHSQDRLKGSPGASQDALVQRL*PRQAVG
Trigger: GCCGACAGCCTGGCGCGGGCAGAGCCGCTGGACAAG...GGCATCTTGACTGGCACCTGGAGAGCCCTTAAGTCTGTCCTGGCTGTGGCCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR GCA 90 bp CCGTGTAGGGCAGGCCTCGGAGGCGTACACAGTCCCTCCCAGTCCCAGGTGCCACCGAATGTCAGCTGCTaGCTCCCCCAGAAAGCTCAG +
Preference number: 4 (lower is better)
Translates to: PCRAGLGGVHSPSQSQVPPNVSC*LPQKAQ
Trigger: CTGAGCTTTCTGGGGGAGGCAGCAGCTGACATTCGG...TGGCACCTGGGACTGGGAGGGACTGTGTACGCCTCCGAGGCCTGCCCTACACGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566774.1
CDS-3UTR CCA 90 bp GGAGAGGGGCTAGCATCTTTAGGTGGGACCACCCCTGGCACAACATGGTCTCTGTGCAGCGTCCCCACCTaGCGGCTCCGCGGCTCAACC +
Preference number: 4 (lower is better)
Translates to: GEGLASLGGTTPGTTWSLCSVPT*RLRGST
Trigger: GGTTGAGCCGCGGAGCCGCCAGGTGGGGACGCTGCA...CAGAGACCATGTTGTGCCAGGGGTGGTCCCACCTAAAGATGCTAGCCCCTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR CCA 90 bp CCGTGTAGGGCAGGCCTCGGAGGCGTACACAGTCCCTCCCAGTCCCAGGTGCCAGATGGCCGGCCCTGCTaGTTGAGCACCATGTGTACA +
Preference number: 4 (lower is better)
Translates to: PCRAGLGGVHSPSQSQVPDGRPC*LSTMCT
Trigger: TGTACACATGGTGCTCAACCAGCAGGGCCGGCCATC...TGGCACCTGGGACTGGGAGGGACTGTGTACGCCTCCGAGGCCTGCCCTACACGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566774.1
CDS-3UTR CCA 90 bp CTTATGCCCACCTGGAGAGGGGCTAGCATCTTTAGGTGGGACCACCCCTGGCACGGGCAGCAGGCACCCTaGCAGCTGGGAGCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: LMPTWRGASIFRWDHPWHGQQAP*QLGAVL
Trigger: CAGCACTGCTCCCAGCTGCCAGGGTGCCTGCTGCCC...GTGCCAGGGGTGGTCCCACCTAAAGATGCTAGCCCCTCTCCAGGTGGGCATAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp CCGTGTAGGGCAGGCCTCGGAGGCGTACACAGTCCCTCCCAGTCCCAGGTGCCAGCCAGTCAAGATGCCTaGCTCAGGCCATCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: PCRAGLGGVHSPSQSQVPASQDA*LRPSGA
Trigger: AGCTCCTGATGGCCTGAGCCAGGCATCTTGACTGGC...TGGCACCTGGGACTGGGAGGGACTGTGTACGCCTCCGAGGCCTGCCCTACACGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566774.1
CDS-3UTR TCA 90 bp GGAGAGGGGCTAGCATCTTTAGGTGGGACCACCCCTGGCACAACATGGTCTCTGGAAGAGGACGACCAGTaGTCCGGGCCAGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GEGLASLGGTTPGTTWSLEEDDQ*SGPGAG
Trigger: CCCTGCCCCTGGCCCGGATCACTGGTCGTCCTCTTC...CAGAGACCATGTTGTGCCAGGGGTGGTCCCACCTAAAGATGCTAGCCCCTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR TCA 90 bp CTTATGCCCACCTGGAGAGGGGCTAGCATCTTTAGGTGGGACCACCCCTGGCACTGCGGCCCTGGGCGTTaGGGCAGAGTGCTACACCAC +
Preference number: 4 (lower is better)
Translates to: LMPTWRGASIFRWDHPWHCGPGR*GRVLHH
Trigger: GTGGTGTAGCACTCTGCCTCAACGCCCAGGGCCGCA...GTGCCAGGGGTGGTCCCACCTAAAGATGCTAGCCCCTCTCCAGGTGGGCATAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR CCA 90 bp GTCTTTGGGGGAAACAGGCAGAATAAGTGGAGGATGGAGCTGGGGCTTGGGCTCTGCAGCGTCCCCACCTaGCGGCTCCGCGGCTCAACC +
Preference number: 4 (lower is better)
Translates to: VFGGNRQNKWRMELGLGLCSVPT*RLRGST
Trigger: GGTTGAGCCGCGGAGCCGCCAGGTGGGGACGCTGCA...GAGCCCAAGCCCCAGCTCCATCCTCCACTTATTCTGCCTGTTTCCCCCAAAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR CCA 90 bp ATGGGACACCCTGCATGCGGACCAAGGCTCCTGACTGGGACAACACTGAGGTGGGGCCGGCCATCAGGATaGCGCACAAAGAGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: MGHPACGPRLLTGTTLRWGRPSG*RTKSSP
Trigger: GGGGCTGCTCTTTGTGCGCCATCCTGATGGCCGGCC...CCACCTCAGTGTTGTCCCAGTCAGGAGCCTTGGTCCGCATGCAGGGTGTCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566774.1
CDS-3UTR CCA 90 bp CCTGGCTCAGGCCATCAGGAGCTGGTTAGCCCCATTCCACCCCCAGCCCTGCATGGGGATGGGCAGCAGTaGGGCAGTCAGTGTAGGAAG +
Preference number: 4 (lower is better)
Translates to: PGSGHQELVSPIPPPALHGDGQQ*GSQCRK
Trigger: CTTCCTACACTGACTGCCCCACTGCTGCCCATCCCC...ATGCAGGGCTGGGGGTGGAATGGGGCTAACCAGCTCCTGATGGCCTGAGCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR TCA 90 bp CCTGGCTCAGGCCATCAGGAGCTGGTTAGCCCCATTCCACCCCCAGCCCTGCATCCCGTTCACCAGCTGTaGGAACTGCTGCAGCACCTT +
Preference number: 4 (lower is better)
Translates to: PGSGHQELVSPIPPPALHPVHQL*ELLQHL
Trigger: AAGGTGCTGCAGCAGTTCTCACAGCTGGTGAACGGG...ATGCAGGGCTGGGGGTGGAATGGGGCTAACCAGCTCCTGATGGCCTGAGCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR TCA 90 bp CCGTGTAGGGCAGGCCTCGGAGGCGTACACAGTCCCTCCCAGTCCCAGGTGCCAGCTCAGATGGACCCTTaGTTCTCCCAGGAGTCATAC +
Preference number: 4 (lower is better)
Translates to: PCRAGLGGVHSPSQSQVPAQMDP*FSQESY
Trigger: GTATGACTCCTGGGAGAATCAAGGGTCCATCTGAGC...TGGCACCTGGGACTGGGAGGGACTGTGTACGCCTCCGAGGCCTGCCCTACACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566774.1
CDS-3UTR GCA 90 bp GGAGAGGGGCTAGCATCTTTAGGTGGGACCACCCCTGGCACAACATGGTCTCTGGCACTGCGTACTCAGTaGGGCCGCCTCGGCACGAAC +
Preference number: 4 (lower is better)
Translates to: GEGLASLGGTTPGTTWSLALRTQ*GRLGTN
Trigger: GTTCGTGCCGAGGCGGCCGCACTGAGTACGCAGTGC...CAGAGACCATGTTGTGCCAGGGGTGGTCCCACCTAAAGATGCTAGCCCCTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR GCA 90 bp GTCTTCAATGGTGGCCGTGTAGGGCAGGCCTCGGAGGCGTACACAGTCCCTCCCATCGCTTACCCAGCATaGCCTTGTGCCTGCGCAGTG +
Preference number: 4 (lower is better)
Translates to: VFNGGRVGQASEAYTVPPIAYPA*PCACAV
Trigger: CACTGCGCAGGCACAAGGGCATGCTGGGTAAGCGAT...GGGAGGGACTGTGTACGCCTCCGAGGCCTGCCCTACACGGCCACCATTGAAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566774.1
CDS-3UTR CCA 90 bp TCACAAGCAAAGAGGGCGAAGGCATCACCAGTCGGCCGGCCATCAGGATGGCGCGGGGATGGGCAGCAGTaGGGCAGTCAGTGTAGGAAG +
Preference number: 4 (lower is better)
Translates to: SQAKRAKASPVGRPSGWRGDGQQ*GSQCRK
Trigger: CTTCCTACACTGACTGCCCCACTGCTGCCCATCCCC...GCGCCATCCTGATGGCCGGCCGACTGGTGATGCCTTCGCCCTCTTTGCTTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566774.1
CDS-3UTR CCA 90 bp GGTGAGAGGCCTTCTTATGGCAACGCTGAGCAGCAGCTAGGGCTCGCTCTGCTGAGTCCCAGGTGCCAGTaGGAAGGGGATGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GERPSYGNAEQQLGLALLSPRCQ*EGDGQQ
Trigger: CTGCTGCCCATCCCCTTCCCACTGGCACCTGGGACT...CAGCAGAGCGAGCCCTAGCTGCTGCTCAGCGTTGCCATAAGAAGGCCTCTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566774.1
CDS-3UTR CCA 90 bp CCTGGCTCAGGCCATCAGGAGCTGGTTAGCCCCATTCCACCCCCAGCCCTGCATGATGGCCGGCCCTGCTaGTTGAGCACCATGTGTACA +
Preference number: 4 (lower is better)
Translates to: PGSGHQELVSPIPPPALHDGRPC*LSTMCT
Trigger: TGTACACATGGTGCTCAACCAGCAGGGCCGGCCATC...ATGCAGGGCTGGGGGTGGAATGGGGCTAACCAGCTCCTGATGGCCTGAGCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp GGAGAGGGGCTAGCATCTTTAGGTGGGACCACCCCTGGCACAACATGGTCTCTGAGTAGGCAACAGGGGTaGGGGCAGCAGGCACCCTGG +
Preference number: 4 (lower is better)
Translates to: GEGLASLGGTTPGTTWSLSRQQG*GQQAPW
Trigger: CCAGGGTGCCTGCTGCCCCCACCCCTGTTGCCTACT...CAGAGACCATGTTGTGCCAGGGGTGGTCCCACCTAAAGATGCTAGCCCCTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp AGATGCCTGGCTCAGGCCATCAGGAGCTGGTTAGCCCCATTCCACCCCCAGCCCAAAGCAAGCCTGCCGTaGACCTGTCAGCCCCACGAT +
Preference number: 4 (lower is better)
Translates to: RCLAQAIRSWLAPFHPQPKASLP*TCQPHD
Trigger: ATCGTGGGGCTGACAGGTCCACGGCAGGCTTGCTTT...GGGCTGGGGGTGGAATGGGGCTAACCAGCTCCTGATGGCCTGAGCCAGGCATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR TCA 90 bp AGATGCCTGGCTCAGGCCATCAGGAGCTGGTTAGCCCCATTCCACCCCCAGCCCCTGATGTCATCTGAATaGAGGCATCGCCCGATGGCC +
Preference number: 4 (lower is better)
Translates to: RCLAQAIRSWLAPFHPQPLMSSE*RHRPMA
Trigger: GGCCATCGGGCGATGCCTTCATTCAGATGACATCAG...GGGCTGGGGGTGGAATGGGGCTAACCAGCTCCTGATGGCCTGAGCCAGGCATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR TCA 90 bp AGATGCCTGGCTCAGGCCATCAGGAGCTGGTTAGCCCCATTCCACCCCCAGCCCAGGCCTGGAAGACGCTaGGCAGATCCTTCATACCAG +
Preference number: 4 (lower is better)
Translates to: RCLAQAIRSWLAPFHPQPRPGRR*ADPSYQ
Trigger: CTGGTATGAAGGATCTGCTCAGCGTCTTCCAGGCCT...GGGCTGGGGGTGGAATGGGGCTAACCAGCTCCTGATGGCCTGAGCCAGGCATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp TGCTGGTCTTCTGGACTCAGGAGAGACATGTTCGCCGAGGATATCAGCTGGCTCCACTGCGGCCCAAGGTaGCCCCCATCAGCACTCGGC +
Preference number: 4 (lower is better)
Translates to: CWSSGLRRDMFAEDISWLHCGPR*PPSALG
Trigger: GCCGAGTGCTGATGGGGGGCACCTTGGGCCGCAGTG...GAGCCAGCTGATATCCTCGGCGAACATGTCTCTCCTGAGTCCAGAAGACCAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR GCA 90 bp AGATGCCTGGCTCAGGCCATCAGGAGCTGGTTAGCCCCATTCCACCCCCAGCCCGGGCTTGTAACACAGTaGGAGGTGGGTCACCAACAG +
Preference number: 4 (lower is better)
Translates to: RCLAQAIRSWLAPFHPQPGLVTQ*EVGHQQ
Trigger: CTGTTGGTGACCCACCTCGCACTGTGTTACAAGCCC...GGGCTGGGGGTGGAATGGGGCTAACCAGCTCCTGATGGCCTGAGCCAGGCATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp AGATGCCTGGCTCAGGCCATCAGGAGCTGGTTAGCCCCATTCCACCCCCAGCCCAAAAGAAAGCAAGCCTaGCGTGGACCTGTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: RCLAQAIRSWLAPFHPQPKRKQA*RGPVSP
Trigger: GGGGCTGACAGGTCCACGGCAGGCTTGCTTTCTTTT...GGGCTGGGGGTGGAATGGGGCTAACCAGCTCCTGATGGCCTGAGCCAGGCATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp CCTGGCTCAGGCCATCAGGAGCTGGTTAGCCCCATTCCACCCCCAGCCCTGCATTGTGTGGGGGCCTACTaGCCCCTAATGTCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: PGSGHQELVSPIPPPALHCVGAY*PLMSSG
Trigger: ACCAGAAGACATTAGGGGGCAGTAGGCCCCCACACA...ATGCAGGGCTGGGGGTGGAATGGGGCTAACCAGCTCCTGATGGCCTGAGCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp GTCTTTGGGGGAAACAGGCAGAATAAGTGGAGGATGGAGCTGGGGCTTGGGCTCGCCAAGCACGTCCGTTaGCCCAGCCGAGAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: VFGGNRQNKWRMELGLGLAKHVR*PSREGQ
Trigger: CTGCCCTTCTCGGCTGGGCCAACGGACGTGCTTGGC...GAGCCCAAGCCCCAGCTCCATCCTCCACTTATTCTGCCTGTTTCCCCCAAAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp CCCCCAGCCCTGCATGCAGGGTCCAGCCATTGTCTTTGGGGGAAACAGGCAGAAAGTCACTGGGCACTCTaGCCCCAGGAAGCCAAGCAC +
Preference number: 4 (lower is better)
Translates to: PPALHAGSSHCLWGKQAESHWAL*PQEAKH
Trigger: GTGCTTGGCTTCCTGGGGCCAGAGTGCCCAGTGACT...TTCTGCCTGTTTCCCCCAAAGACAATGGCTGGACCCTGCATGCAGGGCTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp GTCTTTGGGGGAAACAGGCAGAATAAGTGGAGGATGGAGCTGGGGCTTGGGCTCGGCCGGCCATCAGGATaGCGCACAAAGAGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: VFGGNRQNKWRMELGLGLGRPSG*RTKSSP
Trigger: GGGGCTGCTCTTTGTGCGCCATCCTGATGGCCGGCC...GAGCCCAAGCCCCAGCTCCATCCTCCACTTATTCTGCCTGTTTCCCCCAAAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp CCCCCAGCCCTGCATGCAGGGTCCAGCCATTGTCTTTGGGGGAAACAGGCAGAAGGGGATGGGCAGCAGTaGGGCAGTCAGTGTAGGAAG +
Preference number: 4 (lower is better)
Translates to: PPALHAGSSHCLWGKQAEGDGQQ*GSQCRK
Trigger: CTTCCTACACTGACTGCCCCACTGCTGCCCATCCCC...TTCTGCCTGTTTCCCCCAAAGACAATGGCTGGACCCTGCATGCAGGGCTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp AGATGCCTGGCTCAGGCCATCAGGAGCTGGTTAGCCCCATTCCACCCCCAGCCCTCAGGATGTCTTCAATaGTGGCCGTGTAGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: RCLAQAIRSWLAPFHPQPSGCLQ*WPCRAG
Trigger: GCCTGCCCTACACGGCCACCATTGAAGACATCCTGA...GGGCTGGGGGTGGAATGGGGCTAACCAGCTCCTGATGGCCTGAGCCAGGCATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp CCGTGTAGGGCAGGCCTCGGAGGCGTACACAGTCCCTCCCAGTCCCAGGTGCCAAGGGTGCTGGTCTTCTaGACTCAGGAGAGACATGTT +
Preference number: 4 (lower is better)
Translates to: PCRAGLGGVHSPSQSQVPRVLVF*TQERHV
Trigger: AACATGTCTCTCCTGAGTCCAGAAGACCAGCACCCT...TGGCACCTGGGACTGGGAGGGACTGTGTACGCCTCCGAGGCCTGCCCTACACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566774.1
CDS-3UTR CCA 90 bp CCTGGCTCAGGCCATCAGGAGCTGGTTAGCCCCATTCCACCCCCAGCCCTGCATGCTAGCATCTTTAGGTaGGACCACCCCTGGCACAAC +
Preference number: 4 (lower is better)
Translates to: PGSGHQELVSPIPPPALHASIFR*DHPWHN
Trigger: GTTGTGCCAGGGGTGGTCCCACCTAAAGATGCTAGC...ATGCAGGGCTGGGGGTGGAATGGGGCTAACCAGCTCCTGATGGCCTGAGCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp CTTATGCCCACCTGGAGAGGGGCTAGCATCTTTAGGTGGGACCACCCCTGGCACCCATTTCTGCGGCCCTaGGCGTTGAGGCAGAGTGCT +
Preference number: 4 (lower is better)
Translates to: LMPTWRGASIFRWDHPWHPFLRP*ALRQSA
Trigger: AGCACTCTGCCTCAACGCCCAGGGCCGCAGAAATGG...GTGCCAGGGGTGGTCCCACCTAAAGATGCTAGCCCCTCTCCAGGTGGGCATAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR TCA 90 bp GTCTTTGGGGGAAACAGGCAGAATAAGTGGAGGATGGAGCTGGGGCTTGGGCTCCCGTCTCCGTGGGAATaGGCGTTGGGGTGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: VFGGNRQNKWRMELGLGLPSPWE*ALGWLG
Trigger: TCCAAGCCACCCCAACGCTCATTCCCACGGAGACGG...GAGCCCAAGCCCCAGCTCCATCCTCCACTTATTCTGCCTGTTTCCCCCAAAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp CCTGGCTCAGGCCATCAGGAGCTGGTTAGCCCCATTCCACCCCCAGCCCTGCATTGTCGCAATAGCTGCTaGCCATCAGTGCAGAGCATG +
Preference number: 4 (lower is better)
Translates to: PGSGHQELVSPIPPPALHCRNSC*PSVQSM
Trigger: CATGCTCTGCACTGATGGGCAGCAGCTATTGCGACA...ATGCAGGGCTGGGGGTGGAATGGGGCTAACCAGCTCCTGATGGCCTGAGCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR GCA 90 bp TTACTCCTTATGCCCACCTGGAGAGGGGCTAGCATCTTTAGGTGGGACCACCCCCTGGAGGCCTCGGGGTaGAGGACCTGTCGCAATAGC +
Preference number: 4 (lower is better)
Translates to: LLLMPTWRGASIFRWDHPLEASG*RTCRNS
Trigger: GCTATTGCGACAGGTCCTGCACCCCGAGGCCTCCAG...GGGGTGGTCCCACCTAAAGATGCTAGCCCCTCTCCAGGTGGGCATAAGGAGTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR GCA 90 bp GTCTTTGGGGGAAACAGGCAGAATAAGTGGAGGATGGAGCTGGGGCTTGGGCTCGCATGCCCTTGTGCCTaGGCAGTGCAGCCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: VFGGNRQNKWRMELGLGLACPCA*AVQPVP
Trigger: TGGCACAGGCTGCACTGCGCAGGCACAAGGGCATGC...GAGCCCAAGCCCCAGCTCCATCCTCCACTTATTCTGCCTGTTTCCCCCAAAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp CTTATGCCCACCTGGAGAGGGGCTAGCATCTTTAGGTGGGACCACCCCTGGCACCGGTTCAAGACCTGCTaGACTTCGGCTGCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: LMPTWRGASIFRWDHPWHRFKTC*TSAAVL
Trigger: GAGCACTGCAGCCGAAGTGCAGCAGGTCTTGAACCG...GTGCCAGGGGTGGTCCCACCTAAAGATGCTAGCCCCTCTCCAGGTGGGCATAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp CCATGTGTACACCGTGGGGCCGAATGTCAGCTGCTGCCTCCCCCAGAAAGCTCAGTGTATGGGACACCCTaGATGCGGACCAAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: PCVHRGAECQLLPPPESSVYGTP*MRTKAP
Trigger: AGGAGCCTTGGTCCGCATGCAGGGTGTCCCATACAC...TGAGCTTTCTGGGGGAGGCAGCAGCTGACATTCGGCCCCACGGTGTACACATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566774.1
CDS-3UTR GCA 90 bp GTCTTTGGGGGAAACAGGCAGAATAAGTGGAGGATGGAGCTGGGGCTTGGGCTCGGCGTTGAGGCAGAGTaGTACACCACCCCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: VFGGNRQNKWRMELGLGLGVEAE*YTTPGH
Trigger: GTGGCCAGGGGTGGTGTAGCACTCTGCCTCAACGCC...GAGCCCAAGCCCCAGCTCCATCCTCCACTTATTCTGCCTGTTTCCCCCAAAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR GCA 90 bp GGAGAGGGGCTAGCATCTTTAGGTGGGACCACCCCTGGCACAACATGGTCTCTGTGGTGCTTGTGTCTCTaGAGCGCTAGGTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: GEGLASLGGTTPGTTWSLWCLCL*SARSRC
Trigger: GCAGCGGGACCTAGCGCTGCAGAGACACAAGCACCA...CAGAGACCATGTTGTGCCAGGGGTGGTCCCACCTAAAGATGCTAGCCCCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR CCA 90 bp GGAGAGGGGCTAGCATCTTTAGGTGGGACCACCCCTGGCACAACATGGTCTCTGAAGCGAGCCACGTCCTaGTCTGATGACTGCCACGGC +
Preference number: 4 (lower is better)
Translates to: GEGLASLGGTTPGTTWSLKRATS*SDDCHG
Trigger: GCCGTGGCAGTCATCAGACCAGGACGTGGCTCGCTT...CAGAGACCATGTTGTGCCAGGGGTGGTCCCACCTAAAGATGCTAGCCCCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp TGCTGGTCTTCTGGACTCAGGAGAGACATGTTCGCCGAGGATATCAGCTGGCTCGAAGGCATCGCCCGATaGCCGGCCCTGCTGGTTGAG +
Preference number: 4 (lower is better)
Translates to: CWSSGLRRDMFAEDISWLEGIAR*PALLVE
Trigger: CTCAACCAGCAGGGCCGGCCATCGGGCGATGCCTTC...GAGCCAGCTGATATCCTCGGCGAACATGTCTCTCCTGAGTCCAGAAGACCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp AGATGCCTGGCTCAGGCCATCAGGAGCTGGTTAGCCCCATTCCACCCCCAGCCCGTAGAGTTGAGTGGCTaGCCCTGGATAGTAGGCAAC +
Preference number: 4 (lower is better)
Translates to: RCLAQAIRSWLAPFHPQPVELSG*PWIVGN
Trigger: GTTGCCTACTATCCAGGGCCAGCCACTCAACTCTAC...GGGCTGGGGGTGGAATGGGGCTAACCAGCTCCTGATGGCCTGAGCCAGGCATCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp AGATGCCTGGCTCAGGCCATCAGGAGCTGGTTAGCCCCATTCCACCCCCAGCCCGCCGAGGATATCAGCTaGCTCTTACCTCCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: RCLAQAIRSWLAPFHPQPAEDIS*LLPPGF
Trigger: AAAGCCAGGAGGTAAGAGCCAGCTGATATCCTCGGC...GGGCTGGGGGTGGAATGGGGCTAACCAGCTCCTGATGGCCTGAGCCAGGCATCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp CCCCCAGCCCTGCATGCAGGGTCCAGCCATTGTCTTTGGGGGAAACAGGCAGAAAAAGCAAGCCTGCCGTaGACCTGTCAGCCCCACGAT +
Preference number: 4 (lower is better)
Translates to: PPALHAGSSHCLWGKQAEKASLP*TCQPHD
Trigger: ATCGTGGGGCTGACAGGTCCACGGCAGGCTTGCTTT...TTCTGCCTGTTTCCCCCAAAGACAATGGCTGGACCCTGCATGCAGGGCTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp CCTGGCTCAGGCCATCAGGAGCTGGTTAGCCCCATTCCACCCCCAGCCCTGCATCTCCTTATGCCCACCTaGAGAGGGGCTAGCATCTTT +
Preference number: 4 (lower is better)
Translates to: PGSGHQELVSPIPPPALHLLMPT*RGASIF
Trigger: AAAGATGCTAGCCCCTCTCCAGGTGGGCATAAGGAG...ATGCAGGGCTGGGGGTGGAATGGGGCTAACCAGCTCCTGATGGCCTGAGCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR TCA 90 bp CATGGTGTCTGCTGGGTTCAGGGCAACTGGCTTTCCCAAGGCATACAAGAAAAGGAAGAGGACGACCAGTaGTCCGGGCCAGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: HGVCWVQGNWLSQGIQEKEEDDQ*SGPGAG
Trigger: CCCTGCCCCTGGCCCGGATCACTGGTCGTCCTCTTC...CTTTTCTTGTATGCCTTGGGAAAGCCAGTTGCCCTGAACCCAGCAGACACCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR GCA 90 bp TCTGAGAGCTTTGACAAGCCAGAAAGAAGCTACCAGGTTGAGGGTGCTGGTCTTCTCGCCTCGCGGCACTaGGTACTCAGTGCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: SESFDKPERSYQVEGAGLLASRH*VLSAAA
Trigger: GGCGGCCGCACTGAGTACGCAGTGCCGCGAGGCGAG...AAGACCAGCACCCTCAACCTGGTAGCTTCTTTCTGGCTTGTCAAAGCTCTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR GCA 90 bp GTGCTGGTCTTCTGGACTCAGGAGAGACATGTTCGCCGAGGATATCAGCTGGCTGCTGCTGCCCATCAGTaGAGAGCATGTAGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: VLVFWTQERHVRRGYQLAAAAHQ*RACRGP
Trigger: GGGGCCCCTACATGCTCTGCACTGATGGGCAGCAGC...AGCCAGCTGATATCCTCGGCGAACATGTCTCTCCTGAGTCCAGAAGACCAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR GCA 90 bp TGCTGGTCTTCTGGACTCAGGAGAGACATGTTCGCCGAGGATATCAGCTGGCTCCTTGTGCCTGCGCAGTaGAGCCTGTGCCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: CWSSGLRRDMFAEDISWLLVPAQ*SLCQLL
Trigger: GAGGAGCTGGCACAGGCTGCACTGCGCAGGCACAAG...GAGCCAGCTGATATCCTCGGCGAACATGTCTCTCCTGAGTCCAGAAGACCAGCA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp GTGCTGGTCTTCTGGACTCAGGAGAGACATGTTCGCCGAGGATATCAGCTGGCTCTTGTGCCTGCGCAGTaGAGCCTGTGCCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: VLVFWTQERHVRRGYQLALVPAQ*SLCQLL
Trigger: GAGGAGCTGGCACAGGCTGCACTGCGCAGGCACAAG...AGCCAGCTGATATCCTCGGCGAACATGTCTCTCCTGAGTCCAGAAGACCAGCAC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp CTTATGCCCACCTGGAGAGGGGCTAGCATCTTTAGGTGGGACCACCCCTGGCACAAGGAGTGGGCCGGATaGATAGCGGTTCAAGACCTG +
Preference number: 4 (lower is better)
Translates to: LMPTWRGASIFRWDHPWHKEWAG*IAVQDL
Trigger: CAGGTCTTGAACCGCTATGCATCCGGCCCACTCCTT...GTGCCAGGGGTGGTCCCACCTAAAGATGCTAGCCCCTCTCCAGGTGGGCATAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp ATGGGCCACAGCCAGGACAGACTTAAGGGCTCTCCAGGTGCCAGTCAAGATGCCAGGTGCCAGTCAAGATaGCTGGCTCAGGCCATCAGG +
Preference number: 4 (lower is better)
Translates to: MGHSQDRLKGSPGASQDARCQSR*LAQAIR
Trigger: CCTGATGGCCTGAGCCAGGCATCTTGACTGGCACCT...GGCATCTTGACTGGCACCTGGAGAGCCCTTAAGTCTGTCCTGGCTGTGGCCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp CCCCCAGCCCTGCATGCAGGGTCCAGCCATTGTCTTTGGGGGAAACAGGCAGAAAAAAGAAAGCAAGCCTaGCGTGGACCTGTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: PPALHAGSSHCLWGKQAEKRKQA*RGPVSP
Trigger: GGGGCTGACAGGTCCACGGCAGGCTTGCTTTCTTTT...TTCTGCCTGTTTCCCCCAAAGACAATGGCTGGACCCTGCATGCAGGGCTGGGGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp GCATCTTTAGGTGGGACCACCCCTGGCACAACATGGTCTCTGAGGTCCAGATACAGCGCTAGGTCCCGCTaGTCGCTGTCCACAAAGCGG +
Preference number: 4 (lower is better)
Translates to: ASLGGTTPGTTWSLRSRYSARSR*SLSTKR
Trigger: CCGCTTTGTGGACAGCGAGCAGCGGGACCTAGCGCT...GTATCTGGACCTCAGAGACCATGTTGTGCCAGGGGTGGTCCCACCTAAAGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR CCA 90 bp ATTGTCTTTGGGGGAAACAGGCAGAATAAGTGGAGGATGGAGCTGGGGCTTGGGGGCCGGCCATCAGGATaGCGCACAAAGAGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: IVFGGNRQNKWRMELGLGGRPSG*RTKSSP
Trigger: GGGGCTGCTCTTTGTGCGCCATCCTGATGGCCGGCC...CCCAAGCCCCAGCTCCATCCTCCACTTATTCTGCCTGTTTCCCCCAAAGACAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp CTTATGCCCACCTGGAGAGGGGCTAGCATCTTTAGGTGGGACCACCCCTGGCACTCAGGATGTCTTCAATaGTGGCCGTGTAGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: LMPTWRGASIFRWDHPWHSGCLQ*WPCRAG
Trigger: GCCTGCCCTACACGGCCACCATTGAAGACATCCTGA...GTGCCAGGGGTGGTCCCACCTAAAGATGCTAGCCCCTCTCCAGGTGGGCATAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp GGAGAGGGGCTAGCATCTTTAGGTGGGACCACCCCTGGCACAACATGGTCTCTGCGTGGGAATGAGCGTTaGGGTGGCTTGGAAGGTGGT +
Preference number: 4 (lower is better)
Translates to: GEGLASLGGTTPGTTWSLRGNER*GGLEGG
Trigger: ACCACCTTCCAAGCCACCCCAACGCTCATTCCCACG...CAGAGACCATGTTGTGCCAGGGGTGGTCCCACCTAAAGATGCTAGCCCCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp CGCAGGATCACTTGGTCTTCCCGTGACAAGAAACGAGCCACCTCTAGTGATGTGAGTAGGCAACAGGGGTaGGGGCAGCAGGCACCCTGG +
Preference number: 4 (lower is better)
Translates to: RRITWSSRDKKRATSSDVSRQQG*GQQAPW
Trigger: CCAGGGTGCCTGCTGCCCCCACCCCTGTTGCCTACT...CACATCACTAGAGGTGGCTCGTTTCTTGTCACGGGAAGACCAAGTGATCCTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566774.1
CDS-3UTR CCA 90 bp GTCTTTGGGGGAAACAGGCAGAATAAGTGGAGGATGGAGCTGGGGCTTGGGCTCCAGGCCATCAGGAGCTaGTTAGCCCCATTCCACCCC +
Preference number: 4 (lower is better)
Translates to: VFGGNRQNKWRMELGLGLQAIRS*LAPFHP
Trigger: GGGGTGGAATGGGGCTAACCAGCTCCTGATGGCCTG...GAGCCCAAGCCCCAGCTCCATCCTCCACTTATTCTGCCTGTTTCCCCCAAAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR TCA 90 bp GGAGAGGGGCTAGCATCTTTAGGTGGGACCACCCCTGGCACAACATGGTCTCTGCACTTGGTCTTCCCGTaGCAAGAAACGAGCCACCTC +
Preference number: 4 (lower is better)
Translates to: GEGLASLGGTTPGTTWSLHLVFP*QETSHL
Trigger: GAGGTGGCTCGTTTCTTGTCACGGGAAGACCAAGTG...CAGAGACCATGTTGTGCCAGGGGTGGTCCCACCTAAAGATGCTAGCCCCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR TCA 90 bp TTACTCCTTATGCCCACCTGGAGAGGGGCTAGCATCTTTAGGTGGGACCACCCCTGTCCACAAAGCGGATaGGGGCCTCGCCATTTCTGC +
Preference number: 4 (lower is better)
Translates to: LLLMPTWRGASIFRWDHPCPQSG*GPRHFC
Trigger: GCAGAAATGGCGAGGCCCTCATCCGCTTTGTGGACA...GGGGTGGTCCCACCTAAAGATGCTAGCCCCTCTCCAGGTGGGCATAAGGAGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR GCA 90 bp ATTGTCTTTGGGGGAAACAGGCAGAATAAGTGGAGGATGGAGCTGGGGCTTGGGCGAACCAGCGATTTGTaGAGCGTCCCCACCTGGCGG +
Preference number: 4 (lower is better)
Translates to: IVFGGNRQNKWRMELGLGRTSDL*SVPTWR
Trigger: CCGCCAGGTGGGGACGCTGCACAAATCGCTGGTTCG...CCCAAGCCCCAGCTCCATCCTCCACTTATTCTGCCTGTTTCCCCCAAAGACAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR GCA 90 bp GCATCTTTAGGTGGGACCACCCCTGGCACAACATGGTCTCTGAGGTCCAGATACCCACATCAGCCTTGCTaGTGTAGGGGCAGGGCACAG +
Preference number: 4 (lower is better)
Translates to: ASLGGTTPGTTWSLRSRYPHQPC*CRGRAQ
Trigger: CTGTGCCCTGCCCCTACAGCAGCAAGGCTGATGTGG...GTATCTGGACCTCAGAGACCATGTTGTGCCAGGGGTGGTCCCACCTAAAGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565858.5
CDS-3UTR GCA 90 bp CGCAGGATCACTTGGTCTTCCCGTGACAAGAAACGAGCCACCTCTAGTGATGTGGCATGCCCTTGTGCCTaGGCAGTGCAGCCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: RRITWSSRDKKRATSSDVACPCA*AVQPVP
Trigger: TGGCACAGGCTGCACTGCGCAGGCACAAGGGCATGC...CACATCACTAGAGGTGGCTCGTTTCTTGTCACGGGAAGACCAAGTGATCCTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566774.1
CDS-3UTR CCA 90 bp CCCCCAGCCCTGCATGCAGGGTCCAGCCATTGTCTTTGGGGGAAACAGGCAGAAGGCAGGGCAGGTGCTTaGATGCTGCATATGGAATTC +
Preference number: 4 (lower is better)
Translates to: PPALHAGSSHCLWGKQAEGRAGA*MLHMEF
Trigger: GAATTCCATATGCAGCATCCAAGCACCTGCCCTGCC...TTCTGCCTGTTTCCCCCAAAGACAATGGCTGGACCCTGCATGCAGGGCTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR CCA 90 bp CGCAGGATCACTTGGTCTTCCCGTGACAAGAAACGAGCCACCTCTAGTGATGTGGGTACCCCCAGTCACTaGGCACTCTGGCCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: RRITWSSRDKKRATSSDVGTPSH*ALWPQE
Trigger: TTCCTGGGGCCAGAGTGCCCAGTGACTGGGGGTACC...CACATCACTAGAGGTGGCTCGTTTCTTGTCACGGGAAGACCAAGTGATCCTGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566774.1
CDS-3UTR CCA 90 bp ATGGGCCACAGCCAGGACAGACTTAAGGGCTCTCCAGGTGCCAGTCAAGATGCCCAGTGTAGGAAGGAGTaGGCCGGATGCATAGCGGTT +
Preference number: 4 (lower is better)
Translates to: MGHSQDRLKGSPGASQDAQCRKE*AGCIAV
Trigger: AACCGCTATGCATCCGGCCCACTCCTTCCTACACTG...GGCATCTTGACTGGCACCTGGAGAGCCCTTAAGTCTGTCCTGGCTGTGGCCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp CTTATGCCCACCTGGAGAGGGGCTAGCATCTTTAGGTGGGACCACCCCTGGCACGTAGAGTTGAGTGGCTaGCCCTGGATAGTAGGCAAC +
Preference number: 4 (lower is better)
Translates to: LMPTWRGASIFRWDHPWHVELSG*PWIVGN
Trigger: GTTGCCTACTATCCAGGGCCAGCCACTCAACTCTAC...GTGCCAGGGGTGGTCCCACCTAAAGATGCTAGCCCCTCTCCAGGTGGGCATAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp GTCTTTGGGGGAAACAGGCAGAATAAGTGGAGGATGGAGCTGGGGCTTGGGCTCAGGTGGGACCACCCCTaGCACAACATGGTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: VFGGNRQNKWRMELGLGLRWDHP*HNMVSE
Trigger: CTCAGAGACCATGTTGTGCCAGGGGTGGTCCCACCT...GAGCCCAAGCCCCAGCTCCATCCTCCACTTATTCTGCCTGTTTCCCCCAAAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR TCA 90 bp CTTATGCCCACCTGGAGAGGGGCTAGCATCTTTAGGTGGGACCACCCCTGGCACCAGCTACCATTGTCTTaGCTTCCCAGACCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: LMPTWRGASIFRWDHPWHQLPLS*LPRPQS
Trigger: ACTTTGGGGTCTGGGAAGTCAAGACAATGGTAGCTG...GTGCCAGGGGTGGTCCCACCTAAAGATGCTAGCCCCTCTCCAGGTGGGCATAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR TCA 90 bp TTACTCCTTATGCCCACCTGGAGAGGGGCTAGCATCTTTAGGTGGGACCACCCCCTGATGTCATCTGAATaGAGGCATCGCCCGATGGCC +
Preference number: 4 (lower is better)
Translates to: LLLMPTWRGASIFRWDHPLMSSE*RHRPMA
Trigger: GGCCATCGGGCGATGCCTTCATTCAGATGACATCAG...GGGGTGGTCCCACCTAAAGATGCTAGCCCCTCTCCAGGTGGGCATAAGGAGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR TCA 90 bp TGCTGGTCTTCTGGACTCAGGAGAGACATGTTCGCCGAGGATATCAGCTGGCTCTTCTTATGGCAACGCTaGGCAGCAGCTAGGGCTCGC +
Preference number: 4 (lower is better)
Translates to: CWSSGLRRDMFAEDISWLFLWQR*AAARAR
Trigger: GCGAGCCCTAGCTGCTGCTCAGCGTTGCCATAAGAA...GAGCCAGCTGATATCCTCGGCGAACATGTCTCTCCTGAGTCCAGAAGACCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR TCA 90 bp CATGGTGTCTGCTGGGTTCAGGGCAACTGGCTTTCCCAAGGCATACAAGAAAAGCCGTCTCCGTGGGAATaGGCGTTGGGGTGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: HGVCWVQGNWLSQGIQEKPSPWE*ALGWLG
Trigger: TCCAAGCCACCCCAACGCTCATTCCCACGGAGACGG...CTTTTCTTGTATGCCTTGGGAAAGCCAGTTGCCCTGAACCCAGCAGACACCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp CTTATGCCCACCTGGAGAGGGGCTAGCATCTTTAGGTGGGACCACCCCTGGCACCGCGGCTCAACCACTTaGCAAACTAGGAGGATTAAG +
Preference number: 4 (lower is better)
Translates to: LMPTWRGASIFRWDHPWHRGSTT*QTRRIK
Trigger: CTTAATCCTCCTAGTTTGGCAAGTGGTTGAGCCGCG...GTGCCAGGGGTGGTCCCACCTAAAGATGCTAGCCCCTCTCCAGGTGGGCATAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR GCA 90 bp TCTTCTGGACTCAGGAGAGACATGTTCGCCGAGGATATCAGCTGGCTCTTACCTCGAACCAGCGATTTGTaGAGCGTCCCCACCTGGCGG +
Preference number: 4 (lower is better)
Translates to: SSGLRRDMFAEDISWLLPRTSDL*SVPTWR
Trigger: CCGCCAGGTGGGGACGCTGCACAAATCGCTGGTTCG...AGGTAAGAGCCAGCTGATATCCTCGGCGAACATGTCTCTCCTGAGTCCAGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR GCA 90 bp CCCCCAGCCCTGCATGCAGGGTCCAGCCATTGTCTTTGGGGGAAACAGGCAGAACCCGTCTCGTATTTCTaGTTTATCACCTCGGGCTTC +
Preference number: 4 (lower is better)
Translates to: PPALHAGSSHCLWGKQAEPVSYF*FITSGF
Trigger: GAAGCCCGAGGTGATAAAGCAGAAATACGAGACGGG...TTCTGCCTGTTTCCCCCAAAGACAATGGCTGGACCCTGCATGCAGGGCTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp TGCTGGTCTTCTGGACTCAGGAGAGACATGTTCGCCGAGGATATCAGCTGGCTCATCGCTTACCCAGCATaGCCTTGTGCCTGCGCAGTG +
Preference number: 4 (lower is better)
Translates to: CWSSGLRRDMFAEDISWLIAYPA*PCACAV
Trigger: CACTGCGCAGGCACAAGGGCATGCTGGGTAAGCGAT...GAGCCAGCTGATATCCTCGGCGAACATGTCTCTCCTGAGTCCAGAAGACCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp AGCAAAGAGGGCGAAGGCATCACCAGTCGGCCGGCCATCAGGATGGCGCACAAAATCTGTTACTCCTTATaGCCACCTGGAGAGGGGCTA +
Preference number: 4 (lower is better)
Translates to: SKEGEGITSRPAIRMAHKICYSL*PPGEGL
Trigger: TAGCCCCTCTCCAGGTGGGCATAAGGAGTAACAGAT...TTTGTGCGCCATCCTGATGGCCGGCCGACTGGTGATGCCTTCGCCCTCTTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566774.1
CDS-3UTR GCA 90 bp CATGGTGTCTGCTGGGTTCAGGGCAACTGGCTTTCCCAAGGCATACAAGAAAAGAGCGCTAGGTCCCGCTaGTCGCTGTCCACAAAGCGG +
Preference number: 4 (lower is better)
Translates to: HGVCWVQGNWLSQGIQEKSARSR*SLSTKR
Trigger: CCGCTTTGTGGACAGCGAGCAGCGGGACCTAGCGCT...CTTTTCTTGTATGCCTTGGGAAAGCCAGTTGCCCTGAACCCAGCAGACACCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR CCA 90 bp CGAGGCTTCAGTTCTGTACCATTTAATGCGTGCAAAGGACATTCCATGGTGTCTGCGGCGGCGGAGTCATaGCCGCAGAGGAAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: RGFSSVPFNACKGHSMVSAAAES*PQRKGA
Trigger: AGCCCCCTTCCTCTGCGGCCATGACTCCGCCGCCGC...AGACACCATGGAATGTCCTTTGCACGCATTAAATGGTACAGAACTGAAGCCTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR CCA 90 bp TGCTTCCGAGGCTTCAGTTCTGTACCATTTAATGCGTGCAAAGGACATTCCATGGCGGCGGCGGAGTCATaGCCGCAGAGGAAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: CFRGFSSVPFNACKGHSMAAAES*PQRKGA
Trigger: AGCCCCCTTCCTCTGCGGCCATGACTCCGCCGCCGC...CATGGAATGTCCTTTGCACGCATTAAATGGTACAGAACTGAAGCCTCGGAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR CCA 90 bp TCTTCTGGACTCAGGAGAGACATGTTCGCCGAGGATATCAGCTGGCTCTTACCTGCACCAGGTTCTTCCTaGAGGCCTCGGGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: SSGLRRDMFAEDISWLLPAPGSS*RPRGAG
Trigger: TCCTGCACCCCGAGGCCTCCAGGAAGAACCTGGTGC...AGGTAAGAGCCAGCTGATATCCTCGGCGAACATGTCTCTCCTGAGTCCAGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR CCA 90 bp ATTGTCTTTGGGGGAAACAGGCAGAATAAGTGGAGGATGGAGCTGGGGCTTGGGAAGCGAGCCACGTCCTaGTCTGATGACTGCCACGGC +
Preference number: 4 (lower is better)
Translates to: IVFGGNRQNKWRMELGLGKRATS*SDDCHG
Trigger: GCCGTGGCAGTCATCAGACCAGGACGTGGCTCGCTT...CCCAAGCCCCAGCTCCATCCTCCACTTATTCTGCCTGTTTCCCCCAAAGACAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp CCCCCAGCCCTGCATGCAGGGTCCAGCCATTGTCTTTGGGGGAAACAGGCAGAAAGCCGCAGGATCACTTaGTCTTCCCGTGACAAGAAA +
Preference number: 4 (lower is better)
Translates to: PPALHAGSSHCLWGKQAESRRIT*SSRDKK
Trigger: TTTCTTGTCACGGGAAGACCAAGTGATCCTGCGGCT...TTCTGCCTGTTTCCCCCAAAGACAATGGCTGGACCCTGCATGCAGGGCTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp GTGCTGGTCTTCTGGACTCAGGAGAGACATGTTCGCCGAGGATATCAGCTGGCTCATACCAGCCGTGTATaGGACACCCTGCATGCGGAC +
Preference number: 4 (lower is better)
Translates to: VLVFWTQERHVRRGYQLAHTSRV*DTLHAD
Trigger: GTCCGCATGCAGGGTGTCCCATACACGGCTGGTATG...AGCCAGCTGATATCCTCGGCGAACATGTCTCTCCTGAGTCCAGAAGACCAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp CCCCCAGCCCTGCATGCAGGGTCCAGCCATTGTCTTTGGGGGAAACAGGCAGAAAACACACCCATTCCTTaGGGGCTTGTAACACAGTGC +
Preference number: 4 (lower is better)
Translates to: PPALHAGSSHCLWGKQAENTPIP*GLVTQC
Trigger: GCACTGTGTTACAAGCCCCCAAGGAATGGGTGTGTT...TTCTGCCTGTTTCCCCCAAAGACAATGGCTGGACCCTGCATGCAGGGCTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp GCATCTTTAGGTGGGACCACCCCTGGCACAACATGGTCTCTGAGGTCCAGATACGATGGAGCTGGGGCTTaGGCTCCTCTAGGTACCTTC +
Preference number: 4 (lower is better)
Translates to: ASLGGTTPGTTWSLRSRYDGAGA*APLGTF
Trigger: GAAGGTACCTAGAGGAGCCCAAGCCCCAGCTCCATC...GTATCTGGACCTCAGAGACCATGTTGTGCCAGGGGTGGTCCCACCTAAAGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp GTGCTGGTCTTCTGGACTCAGGAGAGACATGTTCGCCGAGGATATCAGCTGGCTAAAGCAAGCCTGCCGTaGACCTGTCAGCCCCACGAT +
Preference number: 4 (lower is better)
Translates to: VLVFWTQERHVRRGYQLAKASLP*TCQPHD
Trigger: ATCGTGGGGCTGACAGGTCCACGGCAGGCTTGCTTT...AGCCAGCTGATATCCTCGGCGAACATGTCTCTCCTGAGTCCAGAAGACCAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp ATGGGCCACAGCCAGGACAGACTTAAGGGCTCTCCAGGTGCCAGTCAAGATGCCACCCCTGGCACAACATaGTCTCTGAGGTCCAGATAC +
Preference number: 4 (lower is better)
Translates to: MGHSQDRLKGSPGASQDATPGTT*SLRSRY
Trigger: GTATCTGGACCTCAGAGACCATGTTGTGCCAGGGGT...GGCATCTTGACTGGCACCTGGAGAGCCCTTAAGTCTGTCCTGGCTGTGGCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp GTCTTTGGGGGAAACAGGCAGAATAAGTGGAGGATGGAGCTGGGGCTTGGGCTCGCTAGCATCTTTAGGTaGGACCACCCCTGGCACAAC +
Preference number: 4 (lower is better)
Translates to: VFGGNRQNKWRMELGLGLASIFR*DHPWHN
Trigger: GTTGTGCCAGGGGTGGTCCCACCTAAAGATGCTAGC...GAGCCCAAGCCCCAGCTCCATCCTCCACTTATTCTGCCTGTTTCCCCCAAAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp GGAGAGGGGCTAGCATCTTTAGGTGGGACCACCCCTGGCACAACATGGTCTCTGCTCCTTATGCCCACCTaGAGAGGGGCTAGCATCTTT +
Preference number: 4 (lower is better)
Translates to: GEGLASLGGTTPGTTWSLLLMPT*RGASIF
Trigger: AAAGATGCTAGCCCCTCTCCAGGTGGGCATAAGGAG...CAGAGACCATGTTGTGCCAGGGGTGGTCCCACCTAAAGATGCTAGCCCCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp GGAGAGGGGCTAGCATCTTTAGGTGGGACCACCCCTGGCACAACATGGTCTCTGGCAAAGGACATTCCATaGTGTCTGCTGGGTTCAGGG +
Preference number: 4 (lower is better)
Translates to: GEGLASLGGTTPGTTWSLAKDIP*CLLGSG
Trigger: CCCTGAACCCAGCAGACACCATGGAATGTCCTTTGC...CAGAGACCATGTTGTGCCAGGGGTGGTCCCACCTAAAGATGCTAGCCCCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
3UTR CAA 72 bp GGGGCTTGGGTAGTAGGCTGTGTAGTTCAGGTAGAGTaGAGTGGCTGGCCCTGGATAGTAGGCAACAGGGGT +
Preference number: 4 (lower is better)
Translates to: GAWVVGCVVQVE*SGWPWIVGNRG
Trigger: ACCCCTGTTGCCTACTATCCAGGGCCAGCCACTCAACTCTACCTGAACTACACAGCCTACTACCCAAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566774.1
CDS-3UTR TCA 90 bp AGGTACCTTCTGAGAGCTTTGACAAGCCAGAAAGAAGCTACCAGGTTGAGGGTGGCCGGCCCTGCTGGTTaGGCACCATGTGTACACCGT +
Preference number: 4 (lower is better)
Translates to: RYLLRALTSQKEATRLRVAGPAG*APCVHR
Trigger: ACGGTGTACACATGGTGCTCAACCAGCAGGGCCGGC...CACCCTCAACCTGGTAGCTTCTTTCTGGCTTGTCAAAGCTCTCAGAAGGTACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR TCA 90 bp CCCCCAGCCCTGCATGCAGGGTCCAGCCATTGTCTTTGGGGGAAACAGGCAGAACCAGGAGTCATACATTaGAGGTACCAGAGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: PPALHAGSSHCLWGKQAEPGVIH*RYQSFH
Trigger: ATGGAAGCTCTGGTACCTTCAATGTATGACTCCTGG...TTCTGCCTGTTTCCCCCAAAGACAATGGCTGGACCCTGCATGCAGGGCTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR TCA 90 bp AGCAAAGAGGGCGAAGGCATCACCAGTCGGCCGGCCATCAGGATGGCGCACAAACCAGGAGTCATACATTaGAGGTACCAGAGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: SKEGEGITSRPAIRMAHKPGVIH*RYQSFH
Trigger: ATGGAAGCTCTGGTACCTTCAATGTATGACTCCTGG...TTTGTGCGCCATCCTGATGGCCGGCCGACTGGTGATGCCTTCGCCCTCTTTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566774.1
CDS-3UTR TCA 90 bp GGGAGAGGTAGAACATTGGGATCTTTACTCAGAGGCTCAGATGGACCCTTGATTTGCGGCCCTGGGCGTTaGGGCAGAGTGCTACACCAC +
Preference number: 4 (lower is better)
Translates to: GRGRTLGSLLRGSDGPLICGPGR*GRVLHH
Trigger: GTGGTGTAGCACTCTGCCTCAACGCCCAGGGCCGCA...AATCAAGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAATGTTCTACCTCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR GCA 90 bp CTTCTGGACTCAGGAGAGACATGTTCGCCGAGGATATCAGCTGGCTCTTACCTCAGCTGTGAGAACTGCTaGAGCACCTTGTCCAGCGGC +
Preference number: 4 (lower is better)
Translates to: LLDSGETCSPRISAGSYLSCENC*STLSSG
Trigger: GCCGCTGGACAAGGTGCTGCAGCAGTTCTCACAGCT...GAGGTAAGAGCCAGCTGATATCCTCGGCGAACATGTCTCTCCTGAGTCCAGAAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR GCA 90 bp GTCTTTGGGGGAAACAGGCAGAATAAGTGGAGGATGGAGCTGGGGCTTGGGCTCTGTCGCAATAGCTGCTaGCCATCAGTGCAGAGCATG +
Preference number: 4 (lower is better)
Translates to: VFGGNRQNKWRMELGLGLCRNSC*PSVQSM
Trigger: CATGCTCTGCACTGATGGGCAGCAGCTATTGCGACA...GAGCCCAAGCCCCAGCTCCATCCTCCACTTATTCTGCCTGTTTCCCCCAAAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR GCA 90 bp ATTGTCTTTGGGGGAAACAGGCAGAATAAGTGGAGGATGGAGCTGGGGCTTGGGCCCTGGCAGGGCAGGTaGTTGGATGCTGCATATGGA +
Preference number: 4 (lower is better)
Translates to: IVFGGNRQNKWRMELGLGPWQGR*LDAAYG
Trigger: TCCATATGCAGCATCCAAGCACCTGCCCTGCCAGGG...CCCAAGCCCCAGCTCCATCCTCCACTTATTCTGCCTGTTTCCCCCAAAGACAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR GCA 90 bp TCTTCTGGACTCAGGAGAGACATGTTCGCCGAGGATATCAGCTGGCTCTTACCTTCCTGGTCTGATGACTaGCACGGCAACCCACGAGCC +
Preference number: 4 (lower is better)
Translates to: SSGLRRDMFAEDISWLLPSWSDD*HGNPRA
Trigger: GGCTCGTGGGTTGCCGTGGCAGTCATCAGACCAGGA...AGGTAAGAGCCAGCTGATATCCTCGGCGAACATGTCTCTCCTGAGTCCAGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp GGACAGGGAGAGGTAGAACATTGGGATCTTTACTCAGAGGCTCAGATGGACCCTTCCTGGTCTGATGACTaGCACGGCAACCCACGAGCC +
Preference number: 4 (lower is better)
Translates to: GQGEVEHWDLYSEAQMDPSWSDD*HGNPRA
Trigger: GGCTCGTGGGTTGCCGTGGCAGTCATCAGACCAGGA...AGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAATGTTCTACCTCTCCCTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp CTTCTGGACTCAGGAGAGACATGTTCGCCGAGGATATCAGCTGGCTCTTACCTCCTGCTGCACTTCGGCTaGAGTGCTCCGGAAGAGTTC +
Preference number: 4 (lower is better)
Translates to: LLDSGETCSPRISAGSYLLLHFG*SAPEEF
Trigger: GAACTCTTCCGGAGCACTGCAGCCGAAGTGCAGCAG...GAGGTAAGAGCCAGCTGATATCCTCGGCGAACATGTCTCTCCTGAGTCCAGAAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp TCTTCTGGACTCAGGAGAGACATGTTCGCCGAGGATATCAGCTGGCTCTTACCTGGGCCGAATGTCAGCTaGTGCCTCCCCCAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: SSGLRRDMFAEDISWLLPGPNVS*CLPQKA
Trigger: AGCTTTCTGGGGGAGGCAGCAGCTGACATTCGGCCC...AGGTAAGAGCCAGCTGATATCCTCGGCGAACATGTCTCTCCTGAGTCCAGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp AAAATAGTTTGTGGTTTTGCCATCTGTTACTCCTTATGCCCACCTGGAGAGGGGCACTGCGGCCCAAGGTaGCCCCCATCAGCACTCGGC +
Preference number: 4 (lower is better)
Translates to: KIVCGFAICYSLCPPGEGHCGPR*PPSALG
Trigger: GCCGAGTGCTGATGGGGGGCACCTTGGGCCGCAGTG...CCCCTCTCCAGGTGGGCATAAGGAGTAACAGATGGCAAAACCACAAACTATTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR GCA 90 bp TCTTCTGGACTCAGGAGAGACATGTTCGCCGAGGATATCAGCTGGCTCTTACCTGGGGCTGGCTCTCTCTaGCTCCCTATCCCCTACAAG +
Preference number: 4 (lower is better)
Translates to: SSGLRRDMFAEDISWLLPGAGSL*LPIPYK
Trigger: CTTGTAGGGGATAGGGAGGCAGAGAGAGCCAGCCCC...AGGTAAGAGCCAGCTGATATCCTCGGCGAACATGTCTCTCCTGAGTCCAGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp ATGGGCCACAGCCAGGACAGACTTAAGGGCTCTCCAGGTGCCAGTCAAGATGCCATCTGTTACTCCTTATaGCCACCTGGAGAGGGGCTA +
Preference number: 4 (lower is better)
Translates to: MGHSQDRLKGSPGASQDAICYSL*PPGEGL
Trigger: TAGCCCCTCTCCAGGTGGGCATAAGGAGTAACAGAT...GGCATCTTGACTGGCACCTGGAGAGCCCTTAAGTCTGTCCTGGCTGTGGCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp GTCTTTGGGGGAAACAGGCAGAATAAGTGGAGGATGGAGCTGGGGCTTGGGCTCACATTCCATGGTGTCTaGTGGGTTCAGGGCAACTGG +
Preference number: 4 (lower is better)
Translates to: VFGGNRQNKWRMELGLGLTFHGV*WVQGNW
Trigger: CCAGTTGCCCTGAACCCAGCAGACACCATGGAATGT...GAGCCCAAGCCCCAGCTCCATCCTCCACTTATTCTGCCTGTTTCCCCCAAAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp ATGGGCCACAGCCAGGACAGACTTAAGGGCTCTCCAGGTGCCAGTCAAGATGCCAGGGTGCTGGTCTTCTaGACTCAGGAGAGACATGTT +
Preference number: 4 (lower is better)
Translates to: MGHSQDRLKGSPGASQDARVLVF*TQERHV
Trigger: AACATGTCTCTCCTGAGTCCAGAAGACCAGCACCCT...GGCATCTTGACTGGCACCTGGAGAGCCCTTAAGTCTGTCCTGGCTGTGGCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp GGAGAGGGGCTAGCATCTTTAGGTGGGACCACCCCTGGCACAACATGGTCTCTGAACAGGCAGAATAAGTaGAGGATGGAGCTGGGGCTT +
Preference number: 4 (lower is better)
Translates to: GEGLASLGGTTPGTTWSLNRQNK*RMELGL
Trigger: AAGCCCCAGCTCCATCCTCCACTTATTCTGCCTGTT...CAGAGACCATGTTGTGCCAGGGGTGGTCCCACCTAAAGATGCTAGCCCCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp TTACTCCTTATGCCCACCTGGAGAGGGGCTAGCATCTTTAGGTGGGACCACCCCTGGAGCCCCTCACTTTaGGGCAAAGTTAAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: LLLMPTWRGASIFRWDHPWSPSL*GKVKGP
Trigger: AGGACCCTTAACTTTGCCCCAAAGTGAGGGGCTCCA...GGGGTGGTCCCACCTAAAGATGCTAGCCCCTCTCCAGGTGGGCATAAGGAGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR CCA 90 bp GGACAGGGAGAGGTAGAACATTGGGATCTTTACTCAGAGGCTCAGATGGACCCTTCCTCCGCCTGGGGTTaGTGTGGAGCCCCTCACTTT +
Preference number: 4 (lower is better)
Translates to: GQGEVEHWDLYSEAQMDPSSAWG*CGAPHF
Trigger: AAAGTGAGGGGCTCCACACCAACCCCAGGCGGAGGA...AGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAATGTTCTACCTCTCCCTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR CCA 90 bp CATGGTGTCTGCTGGGTTCAGGGCAACTGGCTTTCCCAAGGCATACAAGAAAAGTCCTCCGCCTGGGGTTaGTGTGGAGCCCCTCACTTT +
Preference number: 4 (lower is better)
Translates to: HGVCWVQGNWLSQGIQEKSSAWG*CGAPHF
Trigger: AAAGTGAGGGGCTCCACACCAACCCCAGGCGGAGGA...CTTTTCTTGTATGCCTTGGGAAAGCCAGTTGCCCTGAACCCAGCAGACACCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR GCA 90 bp CATGGTGTCTGCTGGGTTCAGGGCAACTGGCTTTCCCAAGGCATACAAGAAAAGAGCTGTGAGAACTGCTaGAGCACCTTGTCCAGCGGC +
Preference number: 4 (lower is better)
Translates to: HGVCWVQGNWLSQGIQEKSCENC*STLSSG
Trigger: GCCGCTGGACAAGGTGCTGCAGCAGTTCTCACAGCT...CTTTTCTTGTATGCCTTGGGAAAGCCAGTTGCCCTGAACCCAGCAGACACCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR GCA 90 bp ATGGGCCACAGCCAGGACAGACTTAAGGGCTCTCCAGGTGCCAGTCAAGATGCCCAGGTGCTTGGATGCTaGATATGGAATTCTCTTCGG +
Preference number: 4 (lower is better)
Translates to: MGHSQDRLKGSPGASQDAQVLGC*IWNSLR
Trigger: CCGAAGAGAATTCCATATGCAGCATCCAAGCACCTG...GGCATCTTGACTGGCACCTGGAGAGCCCTTAAGTCTGTCCTGGCTGTGGCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR GCA 90 bp TCTTCTGGACTCAGGAGAGACATGTTCGCCGAGGATATCAGCTGGCTCTTACCTGCGCAGTGCAGCCTGTaGCAGCTCCTCACAAGCAAA +
Preference number: 4 (lower is better)
Translates to: SSGLRRDMFAEDISWLLPAQCSL*QLLTSK
Trigger: TTTGCTTGTGAGGAGCTGGCACAGGCTGCACTGCGC...AGGTAAGAGCCAGCTGATATCCTCGGCGAACATGTCTCTCCTGAGTCCAGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp ATTGGGATCTTTACTCAGAGGCTCAGATGGACCCTTGATTCTCCCAGGAGTCATCTTGTGCCTGCGCAGTaGAGCCTGTGCCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: IGIFTQRLRWTLDSPRSHLVPAQ*SLCQLL
Trigger: GAGGAGCTGGCACAGGCTGCACTGCGCAGGCACAAG...ATGACTCCTGGGAGAATCAAGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp TTGGGATCTTTACTCAGAGGCTCAGATGGACCCTTGATTCTCCCAGGAGTCATAGCATGCCCTTGTGCCTaGGCAGTGCAGCCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: LGSLLRGSDGPLILPGVIACPCA*AVQPVP
Trigger: TGGCACAGGCTGCACTGCGCAGGCACAAGGGCATGC...TATGACTCCTGGGAGAATCAAGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp CTTCTGGACTCAGGAGAGACATGTTCGCCGAGGATATCAGCTGGCTCTTACCTCAAGGAGTGGGCCGGATaGATAGCGGTTCAAGACCTG +
Preference number: 4 (lower is better)
Translates to: LLDSGETCSPRISAGSYLKEWAG*IAVQDL
Trigger: CAGGTCTTGAACCGCTATGCATCCGGCCCACTCCTT...GAGGTAAGAGCCAGCTGATATCCTCGGCGAACATGTCTCTCCTGAGTCCAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp GGACAGGGAGAGGTAGAACATTGGGATCTTTACTCAGAGGCTCAGATGGACCCTCCGAATGTCAGCTGCTaGCTCCCCCAGAAAGCTCAG +
Preference number: 4 (lower is better)
Translates to: GQGEVEHWDLYSEAQMDPPNVSC*LPQKAQ
Trigger: CTGAGCTTTCTGGGGGAGGCAGCAGCTGACATTCGG...AGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAATGTTCTACCTCTCCCTGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp TCTTCTGGACTCAGGAGAGACATGTTCGCCGAGGATATCAGCTGGCTCTTACCTGTGTATGGGACACCCTaGATGCGGACCAAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: SSGLRRDMFAEDISWLLPVYGTP*MRTKAP
Trigger: AGGAGCCTTGGTCCGCATGCAGGGTGTCCCATACAC...AGGTAAGAGCCAGCTGATATCCTCGGCGAACATGTCTCTCCTGAGTCCAGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp TCTTCTGGACTCAGGAGAGACATGTTCGCCGAGGATATCAGCTGGCTCTTACCTAGGTGCCAGTCAAGATaGCTGGCTCAGGCCATCAGG +
Preference number: 4 (lower is better)
Translates to: SSGLRRDMFAEDISWLLPRCQSR*LAQAIR
Trigger: CCTGATGGCCTGAGCCAGGCATCTTGACTGGCACCT...AGGTAAGAGCCAGCTGATATCCTCGGCGAACATGTCTCTCCTGAGTCCAGAAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp AGGTACCTTCTGAGAGCTTTGACAAGCCAGAAAGAAGCTACCAGGTTGAGGGTGGGGGCTGGCTCTCTCTaGCTCCCTATCCCCTACAAG +
Preference number: 4 (lower is better)
Translates to: RYLLRALTSQKEATRLRVGAGSL*LPIPYK
Trigger: CTTGTAGGGGATAGGGAGGCAGAGAGAGCCAGCCCC...CACCCTCAACCTGGTAGCTTCTTTCTGGCTTGTCAAAGCTCTCAGAAGGTACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp TGGACCCTTGATTCTCCCAGGAGTCATACATTGAAGGTACCAGAGCTTCCATTTGCCAAGCACGTCCGTTaGCCCAGCCGAGAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: WTLDSPRSHTLKVPELPFAKHVR*PSREGQ
Trigger: CTGCCCTTCTCGGCTGGGCCAACGGACGTGCTTGGC...AAATGGAAGCTCTGGTACCTTCAATGTATGACTCCTGGGAGAATCAAGGGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp AGGTACCTTCTGAGAGCTTTGACAAGCCAGAAAGAAGCTACCAGGTTGAGGGTGAGTCACTGGGCACTCTaGCCCCAGGAAGCCAAGCAC +
Preference number: 4 (lower is better)
Translates to: RYLLRALTSQKEATRLRVSHWAL*PQEAKH
Trigger: GTGCTTGGCTTCCTGGGGCCAGAGTGCCCAGTGACT...CACCCTCAACCTGGTAGCTTCTTTCTGGCTTGTCAAAGCTCTCAGAAGGTACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp TTGGGATCTTTACTCAGAGGCTCAGATGGACCCTTGATTCTCCCAGGAGTCATAGGTACCCCCAGTCACTaGGCACTCTGGCCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: LGSLLRGSDGPLILPGVIGTPSH*ALWPQE
Trigger: TTCCTGGGGCCAGAGTGCCCAGTGACTGGGGGTACC...TATGACTCCTGGGAGAATCAAGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp ATTGGGATCTTTACTCAGAGGCTCAGATGGACCCTTGATTCTCCCAGGAGTCATAGTCCCAGGTGCCAGTaGGAAGGGGATGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: IGIFTQRLRWTLDSPRSHSPRCQ*EGDGQQ
Trigger: CTGCTGCCCATCCCCTTCCCACTGGCACCTGGGACT...ATGACTCCTGGGAGAATCAAGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp ATTGTCTTTGGGGGAAACAGGCAGAATAAGTGGAGGATGGAGCTGGGGCTTGGGACCATGTGTACACCGTaGGGCCGAATGTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: IVFGGNRQNKWRMELGLGTMCTP*GRMSAA
Trigger: AGCAGCTGACATTCGGCCCCACGGTGTACACATGGT...CCCAAGCCCCAGCTCCATCCTCCACTTATTCTGCCTGTTTCCCCCAAAGACAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp AAAATAGTTTGTGGTTTTGCCATCTGTTACTCCTTATGCCCACCTGGAGAGGGGGAAGGCATCGCCCGATaGCCGGCCCTGCTGGTTGAG +
Preference number: 4 (lower is better)
Translates to: KIVCGFAICYSLCPPGEGEGIAR*PALLVE
Trigger: CTCAACCAGCAGGGCCGGCCATCGGGCGATGCCTTC...CCCCTCTCCAGGTGGGCATAAGGAGTAACAGATGGCAAAACCACAAACTATTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp GGACAGGGAGAGGTAGAACATTGGGATCTTTACTCAGAGGCTCAGATGGACCCTCGTGGGAATGAGCGTTaGGGTGGCTTGGAAGGTGGT +
Preference number: 4 (lower is better)
Translates to: GQGEVEHWDLYSEAQMDPRGNER*GGLEGG
Trigger: ACCACCTTCCAAGCCACCCCAACGCTCATTCCCACG...AGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAATGTTCTACCTCTCCCTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp TTGAAGGTACCAGAGCTTCCATTTTATAAAAGAAAGCAAGCCTGCCGTGGACCTGGGCAGCAGGCACCCTaGCAGCTGGGAGCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: LKVPELPFYKRKQACRGPGQQAP*QLGAVL
Trigger: CAGCACTGCTCCCAGCTGCCAGGGTGCCTGCTGCCC...AGGTCCACGGCAGGCTTGCTTTCTTTTATAAAATGGAAGCTCTGGTACCTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp CATGGTGTCTGCTGGGTTCAGGGCAACTGGCTTTCCCAAGGCATACAAGAAAAGCATACCAGCCGTGTATaGGACACCCTGCATGCGGAC +
Preference number: 4 (lower is better)
Translates to: HGVCWVQGNWLSQGIQEKHTSRV*DTLHAD
Trigger: GTCCGCATGCAGGGTGTCCCATACACGGCTGGTATG...CTTTTCTTGTATGCCTTGGGAAAGCCAGTTGCCCTGAACCCAGCAGACACCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp TCTGAGAGCTTTGACAAGCCAGAAAGAAGCTACCAGGTTGAGGGTGCTGGTCTTCAGGCCATCAGGAGCTaGTTAGCCCCATTCCACCCC +
Preference number: 4 (lower is better)
Translates to: SESFDKPERSYQVEGAGLQAIRS*LAPFHP
Trigger: GGGGTGGAATGGGGCTAACCAGCTCCTGATGGCCTG...AAGACCAGCACCCTCAACCTGGTAGCTTCTTTCTGGCTTGTCAAAGCTCTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp GGACAGGGAGAGGTAGAACATTGGGATCTTTACTCAGAGGCTCAGATGGACCCTAGGTGGGACCACCCCTaGCACAACATGGTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: GQGEVEHWDLYSEAQMDPRWDHP*HNMVSE
Trigger: CTCAGAGACCATGTTGTGCCAGGGGTGGTCCCACCT...AGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAATGTTCTACCTCTCCCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR TCA 90 bp TCTTCTGGACTCAGGAGAGACATGTTCGCCGAGGATATCAGCTGGCTCTTACCTCTGATGTCATCTGAATaGAGGCATCGCCCGATGGCC +
Preference number: 4 (lower is better)
Translates to: SSGLRRDMFAEDISWLLPLMSSE*RHRPMA
Trigger: GGCCATCGGGCGATGCCTTCATTCAGATGACATCAG...AGGTAAGAGCCAGCTGATATCCTCGGCGAACATGTCTCTCCTGAGTCCAGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR TCA 90 bp TGCTGGTCTTCTGGACTCAGGAGAGACATGTTCGCCGAGGATATCAGCTGGCTCTCTGCTGATGTCATCTaGATGAAGGCATCGCCCGAT +
Preference number: 4 (lower is better)
Translates to: CWSSGLRRDMFAEDISWLSADVI*MKASPD
Trigger: ATCGGGCGATGCCTTCATTCAGATGACATCAGCAGA...GAGCCAGCTGATATCCTCGGCGAACATGTCTCTCCTGAGTCCAGAAGACCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR TCA 90 bp GTGCTGGTCTTCTGGACTCAGGAGAGACATGTTCGCCGAGGATATCAGCTGGCTTCTGCTGATGTCATCTaGATGAAGGCATCGCCCGAT +
Preference number: 4 (lower is better)
Translates to: VLVFWTQERHVRRGYQLASADVI*MKASPD
Trigger: ATCGGGCGATGCCTTCATTCAGATGACATCAGCAGA...AGCCAGCTGATATCCTCGGCGAACATGTCTCTCCTGAGTCCAGAAGACCAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR TCA 90 bp CTTCTGGACTCAGGAGAGACATGTTCGCCGAGGATATCAGCTGGCTCTTACCTCGCACAACATGGTCTCTaGGGTCCAGATACTCTGAGG +
Preference number: 4 (lower is better)
Translates to: LLDSGETCSPRISAGSYLAQHGL*GPDTLR
Trigger: CCTCAGAGTATCTGGACCTCAGAGACCATGTTGTGC...GAGGTAAGAGCCAGCTGATATCCTCGGCGAACATGTCTCTCCTGAGTCCAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp GTGCTGGTCTTCTGGACTCAGGAGAGACATGTTCGCCGAGGATATCAGCTGGCTCGCGGCTCAACCACTTaGCAAACTAGGAGGATTAAG +
Preference number: 4 (lower is better)
Translates to: VLVFWTQERHVRRGYQLARGSTT*QTRRIK
Trigger: CTTAATCCTCCTAGTTTGGCAAGTGGTTGAGCCGCG...AGCCAGCTGATATCCTCGGCGAACATGTCTCTCCTGAGTCCAGAAGACCAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR GCA 90 bp TGGACCCTTGATTCTCCCAGGAGTCATACATTGAAGGTACCAGAGCTTCCATTTGCTGCTGCCCATCAGTaGAGAGCATGTAGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: WTLDSPRSHTLKVPELPFAAAHQ*RACRGP
Trigger: GGGGCCCCTACATGCTCTGCACTGATGGGCAGCAGC...AAATGGAAGCTCTGGTACCTTCAATGTATGACTCCTGGGAGAATCAAGGGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR GCA 90 bp TCTTCTGGACTCAGGAGAGACATGTTCGCCGAGGATATCAGCTGGCTCTTACCTACCTGTCGCAATAGCTaGTGCCCATCAGTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: SSGLRRDMFAEDISWLLPTCRNS*CPSVQS
Trigger: GCTCTGCACTGATGGGCAGCAGCTATTGCGACAGGT...AGGTAAGAGCCAGCTGATATCCTCGGCGAACATGTCTCTCCTGAGTCCAGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR GCA 90 bp TCTGAGAGCTTTGACAAGCCAGAAAGAAGCTACCAGGTTGAGGGTGCTGGTCTTGCGCAGTGCAGCCTGTaGCAGCTCCTCACAAGCAAA +
Preference number: 4 (lower is better)
Translates to: SESFDKPERSYQVEGAGLAQCSL*QLLTSK
Trigger: TTTGCTTGTGAGGAGCTGGCACAGGCTGCACTGCGC...AAGACCAGCACCCTCAACCTGGTAGCTTCTTTCTGGCTTGTCAAAGCTCTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp CATGGTGTCTGCTGGGTTCAGGGCAACTGGCTTTCCCAAGGCATACAAGAAAAGAAGGAGTGGGCCGGATaGATAGCGGTTCAAGACCTG +
Preference number: 4 (lower is better)
Translates to: HGVCWVQGNWLSQGIQEKKEWAG*IAVQDL
Trigger: CAGGTCTTGAACCGCTATGCATCCGGCCCACTCCTT...CTTTTCTTGTATGCCTTGGGAAAGCCAGTTGCCCTGAACCCAGCAGACACCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp TCTGAGAGCTTTGACAAGCCAGAAAGAAGCTACCAGGTTGAGGGTGCTGGTCTTCCGAATGTCAGCTGCTaGCTCCCCCAGAAAGCTCAG +
Preference number: 4 (lower is better)
Translates to: SESFDKPERSYQVEGAGLPNVSC*LPQKAQ
Trigger: CTGAGCTTTCTGGGGGAGGCAGCAGCTGACATTCGG...AAGACCAGCACCCTCAACCTGGTAGCTTCTTTCTGGCTTGTCAAAGCTCTCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp TGCTGGTCTTCTGGACTCAGGAGAGACATGTTCGCCGAGGATATCAGCTGGCTCATCTGTTACTCCTTATaGCCACCTGGAGAGGGGCTA +
Preference number: 4 (lower is better)
Translates to: CWSSGLRRDMFAEDISWLICYSL*PPGEGL
Trigger: TAGCCCCTCTCCAGGTGGGCATAAGGAGTAACAGAT...GAGCCAGCTGATATCCTCGGCGAACATGTCTCTCCTGAGTCCAGAAGACCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp GGACAGGGAGAGGTAGAACATTGGGATCTTTACTCAGAGGCTCAGATGGACCCTCCACATCAGCCTTGCTaGAAGGCCCCGTCTCGTATT +
Preference number: 4 (lower is better)
Translates to: GQGEVEHWDLYSEAQMDPPHQPC*KAPSRI
Trigger: AATACGAGACGGGGCCTTGCAGCAAGGCTGATGTGG...AGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAATGTTCTACCTCTCCCTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000566774.1
CDS-3UTR GCA 90 bp CGAGGCTTCAGTTCTGTACCATTTAATGCGTGCAAAGGACATTCCATGGTGTCTGGCGTTGAGGCAGAGTaGTACACCACCCCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: RGFSSVPFNACKGHSMVSGVEAE*YTTPGH
Trigger: GTGGCCAGGGGTGGTGTAGCACTCTGCCTCAACGCC...AGACACCATGGAATGTCCTTTGCACGCATTAAATGGTACAGAACTGAAGCCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR GCA 90 bp ATTGGGATCTTTACTCAGAGGCTCAGATGGACCCTTGATTCTCCCAGGAGTCATTGGTGCTTGTGTCTCTaGAGCGCTAGGTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: IGIFTQRLRWTLDSPRSHWCLCL*SARSRC
Trigger: GCAGCGGGACCTAGCGCTGCAGAGACACAAGCACCA...ATGACTCCTGGGAGAATCAAGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR CCA 90 bp TGCTGGTCTTCTGGACTCAGGAGAGACATGTTCGCCGAGGATATCAGCTGGCTCAGCCGCAGGATCACTTaGTCTTCCCGTGACAAGAAA +
Preference number: 4 (lower is better)
Translates to: CWSSGLRRDMFAEDISWLSRRIT*SSRDKK
Trigger: TTTCTTGTCACGGGAAGACCAAGTGATCCTGCGGCT...GAGCCAGCTGATATCCTCGGCGAACATGTCTCTCCTGAGTCCAGAAGACCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp TTGGGATCTTTACTCAGAGGCTCAGATGGACCCTTGATTCTCCCAGGAGTCATAAGTCACTGGGCACTCTaGCCCCAGGAAGCCAAGCAC +
Preference number: 4 (lower is better)
Translates to: LGSLLRGSDGPLILPGVISHWAL*PQEAKH
Trigger: GTGCTTGGCTTCCTGGGGCCAGAGTGCCCAGTGACT...TATGACTCCTGGGAGAATCAAGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp CATGGTGTCTGCTGGGTTCAGGGCAACTGGCTTTCCCAAGGCATACAAGAAAAGACCATGTGTACACCGTaGGGCCGAATGTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: HGVCWVQGNWLSQGIQEKTMCTP*GRMSAA
Trigger: AGCAGCTGACATTCGGCCCCACGGTGTACACATGGT...CTTTTCTTGTATGCCTTGGGAAAGCCAGTTGCCCTGAACCCAGCAGACACCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp AGGTACCTTCTGAGAGCTTTGACAAGCCAGAAAGAAGCTACCAGGTTGAGGGTGCGTGGGAATGAGCGTTaGGGTGGCTTGGAAGGTGGT +
Preference number: 4 (lower is better)
Translates to: RYLLRALTSQKEATRLRVRGNER*GGLEGG
Trigger: ACCACCTTCCAAGCCACCCCAACGCTCATTCCCACG...CACCCTCAACCTGGTAGCTTCTTTCTGGCTTGTCAAAGCTCTCAGAAGGTACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp CTTCTGGACTCAGGAGAGACATGTTCGCCGAGGATATCAGCTGGCTCTTACCTCTCAGGTAGAGTTGAGTaGCTGGCCCTGGATAGTAGG +
Preference number: 4 (lower is better)
Translates to: LLDSGETCSPRISAGSYLSGRVE*LALDSR
Trigger: CCTACTATCCAGGGCCAGCCACTCAACTCTACCTGA...GAGGTAAGAGCCAGCTGATATCCTCGGCGAACATGTCTCTCCTGAGTCCAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp GTGCTGGTCTTCTGGACTCAGGAGAGACATGTTCGCCGAGGATATCAGCTGGCTAGGGTGCTGGTCTTCTaGACTCAGGAGAGACATGTT +
Preference number: 4 (lower is better)
Translates to: VLVFWTQERHVRRGYQLARVLVF*TQERHV
Trigger: AACATGTCTCTCCTGAGTCCAGAAGACCAGCACCCT...AGCCAGCTGATATCCTCGGCGAACATGTCTCTCCTGAGTCCAGAAGACCAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp TCTGAGAGCTTTGACAAGCCAGAAAGAAGCTACCAGGTTGAGGGTGCTGGTCTTCGATATCTGTCGGCATaGGCCACAGCCAGGACAGAC +
Preference number: 4 (lower is better)
Translates to: SESFDKPERSYQVEGAGLRYLSA*ATARTD
Trigger: GTCTGTCCTGGCTGTGGCCCATGCCGACAGATATCG...AAGACCAGCACCCTCAACCTGGTAGCTTCTTTCTGGCTTGTCAAAGCTCTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp AGGTACCTTCTGAGAGCTTTGACAAGCCAGAAAGAAGCTACCAGGTTGAGGGTGCGATATCTGTCGGCATaGGCCACAGCCAGGACAGAC +
Preference number: 4 (lower is better)
Translates to: RYLLRALTSQKEATRLRVRYLSA*ATARTD
Trigger: GTCTGTCCTGGCTGTGGCCCATGCCGACAGATATCG...CACCCTCAACCTGGTAGCTTCTTTCTGGCTTGTCAAAGCTCTCAGAAGGTACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp GGAGAGGGGCTAGCATCTTTAGGTGGGACCACCCCTGGCACAACATGGTCTCTGGGAGAGGTAGAACATTaGGATCTTTACTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: GEGLASLGGTTPGTTWSLGEVEH*DLYSEA
Trigger: AGCCTCTGAGTAAAGATCCCAATGTTCTACCTCTCC...CAGAGACCATGTTGTGCCAGGGGTGGTCCCACCTAAAGATGCTAGCCCCTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp TGCTTCCGAGGCTTCAGTTCTGTACCATTTAATGCGTGCAAAGGACATTCCATGGAGTGTTCCTCCGCCTaGGGTTGGTGTGGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: CFRGFSSVPFNACKGHSMECSSA*GWCGAP
Trigger: AGGGGCTCCACACCAACCCCAGGCGGAGGAACACTC...CATGGAATGTCCTTTGCACGCATTAAATGGTACAGAACTGAAGCCTCGGAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR TCA 90 bp ATAGTTTGTGGTTTTGCCATCTGTTACTCCTTATGCCCACCTGGAGAGGGGCTACCCGTTCACCAGCTGTaGGAACTGCTGCAGCACCTT +
Preference number: 4 (lower is better)
Translates to: IVCGFAICYSLCPPGEGLPVHQL*ELLQHL
Trigger: AAGGTGCTGCAGCAGTTCTCACAGCTGGTGAACGGG...TAGCCCCTCTCCAGGTGGGCATAAGGAGTAACAGATGGCAAAACCACAAACTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR TCA 90 bp TCTGAGAGCTTTGACAAGCCAGAAAGAAGCTACCAGGTTGAGGGTGCTGGTCTTCACTTGGTCTTCCCGTaGCAAGAAACGAGCCACCTC +
Preference number: 4 (lower is better)
Translates to: SESFDKPERSYQVEGAGLHLVFP*QETSHL
Trigger: GAGGTGGCTCGTTTCTTGTCACGGGAAGACCAAGTG...AAGACCAGCACCCTCAACCTGGTAGCTTCTTTCTGGCTTGTCAAAGCTCTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR TCA 90 bp TTGAAGGTACCAGAGCTTCCATTTTATAAAAGAAAGCAAGCCTGCCGTGGACCTGCCGGCCCTGCTGGTTaGGCACCATGTGTACACCGT +
Preference number: 4 (lower is better)
Translates to: LKVPELPFYKRKQACRGPAGPAG*APCVHR
Trigger: ACGGTGTACACATGGTGCTCAACCAGCAGGGCCGGC...AGGTCCACGGCAGGCTTGCTTTCTTTTATAAAATGGAAGCTCTGGTACCTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR TCA 90 bp TTGAAGGTACCAGAGCTTCCATTTTATAAAAGAAAGCAAGCCTGCCGTGGACCTCCGTCTCCGTGGGAATaGGCGTTGGGGTGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: LKVPELPFYKRKQACRGPPSPWE*ALGWLG
Trigger: TCCAAGCCACCCCAACGCTCATTCCCACGGAGACGG...AGGTCCACGGCAGGCTTGCTTTCTTTTATAAAATGGAAGCTCTGGTACCTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR TCA 90 bp CATGGTGTCTGCTGGGTTCAGGGCAACTGGCTTTCCCAAGGCATACAAGAAAAGGCTCAGATGGACCCTTaGTTCTCCCAGGAGTCATAC +
Preference number: 4 (lower is better)
Translates to: HGVCWVQGNWLSQGIQEKAQMDP*FSQESY
Trigger: GTATGACTCCTGGGAGAATCAAGGGTCCATCTGAGC...CTTTTCTTGTATGCCTTGGGAAAGCCAGTTGCCCTGAACCCAGCAGACACCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp AGTCATACATTGAAGGTACCAGAGCTTCCATTTTATAAAAGAAAGCAAGCCTGCCTCGCCTCGCGGCACTaGGTACTCAGTGCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: SHTLKVPELPFYKRKQACLASRH*VLSAAA
Trigger: GGCGGCCGCACTGAGTACGCAGTGCCGCGAGGCGAG...GCAGGCTTGCTTTCTTTTATAAAATGGAAGCTCTGGTACCTTCAATGTATGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR GCA 90 bp AGTCATACATTGAAGGTACCAGAGCTTCCATTTTATAAAAGAAAGCAAGCCTGCCTTGTCCAGCGGCTCTaGCCGCGCCAGGCTGTCGGC +
Preference number: 4 (lower is better)
Translates to: SHTLKVPELPFYKRKQACLVQRL*PRQAVG
Trigger: GCCGACAGCCTGGCGCGGGCAGAGCCGCTGGACAAG...GCAGGCTTGCTTTCTTTTATAAAATGGAAGCTCTGGTACCTTCAATGTATGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR GCA 90 bp CCAAATTGCTTCCGAGGCTTCAGTTCTGTACCATTTAATGCGTGCAAAGGACATCTGGAGGCCTCGGGGTaGAGGACCTGTCGCAATAGC +
Preference number: 4 (lower is better)
Translates to: PNCFRGFSSVPFNACKGHLEASG*RTCRNS
Trigger: GCTATTGCGACAGGTCCTGCACCCCGAGGCCTCCAG...ATGTCCTTTGCACGCATTAAATGGTACAGAACTGAAGCCTCGGAAGCAATTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR GCA 90 bp GTGCTGGTCTTCTGGACTCAGGAGAGACATGTTCGCCGAGGATATCAGCTGGCTCAGGTGCTTGGATGCTaGATATGGAATTCTCTTCGG +
Preference number: 4 (lower is better)
Translates to: VLVFWTQERHVRRGYQLAQVLGC*IWNSLR
Trigger: CCGAAGAGAATTCCATATGCAGCATCCAAGCACCTG...AGCCAGCTGATATCCTCGGCGAACATGTCTCTCCTGAGTCCAGAAGACCAGCAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR GCA 90 bp TGGACCCTTGATTCTCCCAGGAGTCATACATTGAAGGTACCAGAGCTTCCATTTCCACCACATCAGCCTTaGTGCTGTAGGGGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: WTLDSPRSHTLKVPELPFPPHQP*CCRGRA
Trigger: TGCCCTGCCCCTACAGCAGCAAGGCTGATGTGGTGG...AAATGGAAGCTCTGGTACCTTCAATGTATGACTCCTGGGAGAATCAAGGGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565858.5
CDS-3UTR GCA 90 bp TGCTTCCGAGGCTTCAGTTCTGTACCATTTAATGCGTGCAAAGGACATTCCATGTCCTGGTCTGATGACTaGCACGGCAACCCACGAGCC +
Preference number: 4 (lower is better)
Translates to: CFRGFSSVPFNACKGHSMSWSDD*HGNPRA
Trigger: GGCTCGTGGGTTGCCGTGGCAGTCATCAGACCAGGA...CATGGAATGTCCTTTGCACGCATTAAATGGTACAGAACTGAAGCCTCGGAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp TTGGGATCTTTACTCAGAGGCTCAGATGGACCCTTGATTCTCCCAGGAGTCATACTGCTGCACTTCGGCTaGAGTGCTCCGGAAGAGTTC +
Preference number: 4 (lower is better)
Translates to: LGSLLRGSDGPLILPGVILLHFG*SAPEEF
Trigger: GAACTCTTCCGGAGCACTGCAGCCGAAGTGCAGCAG...TATGACTCCTGGGAGAATCAAGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp GGGAGAGGTAGAACATTGGGATCTTTACTCAGAGGCTCAGATGGACCCTTGATTCTGCTGCACTTCGGCTaGAGTGCTCCGGAAGAGTTC +
Preference number: 4 (lower is better)
Translates to: GRGRTLGSLLRGSDGPLILLHFG*SAPEEF
Trigger: GAACTCTTCCGGAGCACTGCAGCCGAAGTGCAGCAG...AATCAAGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAATGTTCTACCTCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp TTTACTCAGAGGCTCAGATGGACCCTTGATTCTCCCAGGAGTCATACATTGAAGGGGCCGAATGTCAGCTaGTGCCTCCCCCAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: FTQRLRWTLDSPRSHTLKGPNVS*CLPQKA
Trigger: AGCTTTCTGGGGGAGGCAGCAGCTGACATTCGGCCC...CTTCAATGTATGACTCCTGGGAGAATCAAGGGTCCATCTGAGCCTCTGAGTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp TCTGAGAGCTTTGACAAGCCAGAAAGAAGCTACCAGGTTGAGGGTGCTGGTCTTGGGCTTGTAACACAGTaGGAGGTGGGTCACCAACAG +
Preference number: 4 (lower is better)
Translates to: SESFDKPERSYQVEGAGLGLVTQ*EVGHQQ
Trigger: CTGTTGGTGACCCACCTCGCACTGTGTTACAAGCCC...AAGACCAGCACCCTCAACCTGGTAGCTTCTTTCTGGCTTGTCAAAGCTCTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp ATTGGGATCTTTACTCAGAGGCTCAGATGGACCCTTGATTCTCCCAGGAGTCATAGGTGCCAGTCAAGATaGCTGGCTCAGGCCATCAGG +
Preference number: 4 (lower is better)
Translates to: IGIFTQRLRWTLDSPRSHRCQSR*LAQAIR
Trigger: CCTGATGGCCTGAGCCAGGCATCTTGACTGGCACCT...ATGACTCCTGGGAGAATCAAGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp AAAATAGTTTGTGGTTTTGCCATCTGTTACTCCTTATGCCCACCTGGAGAGGGGGGGGCTGGCTCTCTCTaGCTCCCTATCCCCTACAAG +
Preference number: 4 (lower is better)
Translates to: KIVCGFAICYSLCPPGEGGAGSL*LPIPYK
Trigger: CTTGTAGGGGATAGGGAGGCAGAGAGAGCCAGCCCC...CCCCTCTCCAGGTGGGCATAAGGAGTAACAGATGGCAAAACCACAAACTATTTT
52% GC, longest homopolymer 8 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp GTCTTCAATGGTGGCCGTGTAGGGCAGGCCTCGGAGGCGTACACAGTCCCTCCCAATAGTTTGTGGTTTTaGCATCTGTTACTCCTTATG +
Preference number: 4 (lower is better)
Translates to: VFNGGRVGQASEAYTVPPNSLWF*HLLLLM
Trigger: CATAAGGAGTAACAGATGGCAAAACCACAAACTATT...GGGAGGGACTGTGTACGCCTCCGAGGCCTGCCCTACACGGCCACCATTGAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566774.1
CDS-3UTR GCA 90 bp GGACAGGGAGAGGTAGAACATTGGGATCTTTACTCAGAGGCTCAGATGGACCCTACATTCCATGGTGTCTaGTGGGTTCAGGGCAACTGG +
Preference number: 4 (lower is better)
Translates to: GQGEVEHWDLYSEAQMDPTFHGV*WVQGNW
Trigger: CCAGTTGCCCTGAACCCAGCAGACACCATGGAATGT...AGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAATGTTCTACCTCTCCCTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp TCTGAGAGCTTTGACAAGCCAGAAAGAAGCTACCAGGTTGAGGGTGCTGGTCTTCCACATCAGCCTTGCTaGAAGGCCCCGTCTCGTATT +
Preference number: 4 (lower is better)
Translates to: SESFDKPERSYQVEGAGLPHQPC*KAPSRI
Trigger: AATACGAGACGGGGCCTTGCAGCAAGGCTGATGTGG...AAGACCAGCACCCTCAACCTGGTAGCTTCTTTCTGGCTTGTCAAAGCTCTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000566774.1
CDS-3UTR GCA 90 bp TCTGGTGATACTGCAGCACAGTCCATCAAAATAGTTTGTGGTTTTGCCATCTGTAGGGGCAGGGCACAGTaGTGTCAGAGCAAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: SGDTAAQSIKIVCGFAICRGRAQ*CQSKAP
Trigger: CGGGGCCTTGCTCTGACAGCACTGTGCCCTGCCCCT...ACAGATGGCAAAACCACAAACTATTTTGATGGACTGTGCTGCAGTATCACCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000565858.5
CDS-3UTR CCA 90 bp CGCAGGATCACTTGGTCTTCCCGTGACAAGAAACGAGCCACCTCTAGTGATGTGAGCCGCAGGATCACTTaGTCTTCCCGTGACAAGAAA +
Preference number: 4 (lower is better)
Translates to: RRITWSSRDKKRATSSDVSRRIT*SSRDKK
Trigger: TTTCTTGTCACGGGAAGACCAAGTGATCCTGCGGCT...CACATCACTAGAGGTGGCTCGTTTCTTGTCACGGGAAGACCAAGTGATCCTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566774.1
CDS-3UTR CCA 90 bp TTGAAGGTACCAGAGCTTCCATTTTATAAAAGAAAGCAAGCCTGCCGTGGACCTGGTACCCCCAGTCACTaGGCACTCTGGCCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: LKVPELPFYKRKQACRGPGTPSH*ALWPQE
Trigger: TTCCTGGGGCCAGAGTGCCCAGTGACTGGGGGTACC...AGGTCCACGGCAGGCTTGCTTTCTTTTATAAAATGGAAGCTCTGGTACCTTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp TTGAAGGTACCAGAGCTTCCATTTTATAAAAGAAAGCAAGCCTGCCGTGGACCTAGTCCCAGGTGCCAGTaGGAAGGGGATGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LKVPELPFYKRKQACRGPSPRCQ*EGDGQQ
Trigger: CTGCTGCCCATCCCCTTCCCACTGGCACCTGGGACT...AGGTCCACGGCAGGCTTGCTTTCTTTTATAAAATGGAAGCTCTGGTACCTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp TTGGGATCTTTACTCAGAGGCTCAGATGGACCCTTGATTCTCCCAGGAGTCATAGGCTCATCTCCTCTGTaGAACAGGGGACCACCTCCA +
Preference number: 4 (lower is better)
Translates to: LGSLLRGSDGPLILPGVIGSSPL*NRGPPP
Trigger: TGGAGGTGGTCCCCTGTTCCACAGAGGAGATGAGCC...TATGACTCCTGGGAGAATCAAGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR CCA 90 bp TCTGGTGATACTGCAGCACAGTCCATCAAAATAGTTTGTGGTTTTGCCATCTGTAGTAGGCAACAGGGGTaGGGGCAGCAGGCACCCTGG +
Preference number: 4 (lower is better)
Translates to: SGDTAAQSIKIVCGFAICSRQQG*GQQAPW
Trigger: CCAGGGTGCCTGCTGCCCCCACCCCTGTTGCCTACT...ACAGATGGCAAAACCACAAACTATTTTGATGGACTGTGCTGCAGTATCACCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp CATGGTGTCTGCTGGGTTCAGGGCAACTGGCTTTCCCAAGGCATACAAGAAAAGTCAGGTAGAGTTGAGTaGCTGGCCCTGGATAGTAGG +
Preference number: 4 (lower is better)
Translates to: HGVCWVQGNWLSQGIQEKSGRVE*LALDSR
Trigger: CCTACTATCCAGGGCCAGCCACTCAACTCTACCTGA...CTTTTCTTGTATGCCTTGGGAAAGCCAGTTGCCCTGAACCCAGCAGACACCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp ATTGGGATCTTTACTCAGAGGCTCAGATGGACCCTTGATTCTCCCAGGAGTCATCATACCAGCCGTGTATaGGACACCCTGCATGCGGAC +
Preference number: 4 (lower is better)
Translates to: IGIFTQRLRWTLDSPRSHHTSRV*DTLHAD
Trigger: GTCCGCATGCAGGGTGTCCCATACACGGCTGGTATG...ATGACTCCTGGGAGAATCAAGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp CTTCTGGACTCAGGAGAGACATGTTCGCCGAGGATATCAGCTGGCTCTTACCTCAACACACCCATTCCTTaGGGGCTTGTAACACAGTGC +
Preference number: 4 (lower is better)
Translates to: LLDSGETCSPRISAGSYLNTPIP*GLVTQC
Trigger: GCACTGTGTTACAAGCCCCCAAGGAATGGGTGTGTT...GAGGTAAGAGCCAGCTGATATCCTCGGCGAACATGTCTCTCCTGAGTCCAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp TGGAAGACGCTGAGCAGATCCTTCATACCAGCCGTGTATGGGACACCCTGCATGCTGGCTCTTACCTCCTaGCTTTCTCTCCTACAAACA +
Preference number: 4 (lower is better)
Translates to: WKTLSRSFIPAVYGTPCMLALTS*LSLLQT
Trigger: TGTTTGTAGGAGAGAAAGCCAGGAGGTAAGAGCCAG...CATGCAGGGTGTCCCATACACGGCTGGTATGAAGGATCTGCTCAGCGTCTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566774.1
CDS-3UTR CCA 90 bp GGACAGGGAGAGGTAGAACATTGGGATCTTTACTCAGAGGCTCAGATGGACCCTGCCGAGGATATCAGCTaGCTCTTACCTCCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: GQGEVEHWDLYSEAQMDPAEDIS*LLPPGF
Trigger: AAAGCCAGGAGGTAAGAGCCAGCTGATATCCTCGGC...AGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAATGTTCTACCTCTCCCTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp ATAGTTTGTGGTTTTGCCATCTGTTACTCCTTATGCCCACCTGGAGAGGGGCTAGATGGAGCTGGGGCTTaGGCTCCTCTAGGTACCTTC +
Preference number: 4 (lower is better)
Translates to: IVCGFAICYSLCPPGEGLDGAGA*APLGTF
Trigger: GAAGGTACCTAGAGGAGCCCAAGCCCCAGCTCCATC...TAGCCCCTCTCCAGGTGGGCATAAGGAGTAACAGATGGCAAAACCACAAACTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp CGAGGCTTCAGTTCTGTACCATTTAATGCGTGCAAAGGACATTCCATGGTGTCTAGTGGAGGATGGAGCTaGGGCTTGGGCTCCTCTAGG +
Preference number: 4 (lower is better)
Translates to: RGFSSVPFNACKGHSMVSSGGWS*GLGSSR
Trigger: CCTAGAGGAGCCCAAGCCCCAGCTCCATCCTCCACT...AGACACCATGGAATGTCCTTTGCACGCATTAAATGGTACAGAACTGAAGCCTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp ATTGGGATCTTTACTCAGAGGCTCAGATGGACCCTTGATTCTCCCAGGAGTCATCGATATCTGTCGGCATaGGCCACAGCCAGGACAGAC +
Preference number: 4 (lower is better)
Translates to: IGIFTQRLRWTLDSPRSHRYLSA*ATARTD
Trigger: GTCTGTCCTGGCTGTGGCCCATGCCGACAGATATCG...ATGACTCCTGGGAGAATCAAGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp ATAGTTTGTGGTTTTGCCATCTGTTACTCCTTATGCCCACCTGGAGAGGGGCTAAGGTGGGACCACCCCTaGCACAACATGGTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: IVCGFAICYSLCPPGEGLRWDHP*HNMVSE
Trigger: CTCAGAGACCATGTTGTGCCAGGGGTGGTCCCACCT...TAGCCCCTCTCCAGGTGGGCATAAGGAGTAACAGATGGCAAAACCACAAACTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp CGCAGGATCACTTGGTCTTCCCGTGACAAGAAACGAGCCACCTCTAGTGATGTGTGGGTTCAGGGCAACTaGCTTTCCCAAGGCATACAA +
Preference number: 4 (lower is better)
Translates to: RRITWSSRDKKRATSSDVWVQGN*LSQGIQ
Trigger: TTGTATGCCTTGGGAAAGCCAGTTGCCCTGAACCCA...CACATCACTAGAGGTGGCTCGTTTCTTGTCACGGGAAGACCAAGTGATCCTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566774.1
CDS-3UTR CCA 90 bp GGACAGGGAGAGGTAGAACATTGGGATCTTTACTCAGAGGCTCAGATGGACCCTTTCCATGGTGTCTGCTaGGTTCAGGGCAACTGGCTT +
Preference number: 4 (lower is better)
Translates to: GQGEVEHWDLYSEAQMDPFHGVC*VQGNWL
Trigger: AAGCCAGTTGCCCTGAACCCAGCAGACACCATGGAA...AGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAATGTTCTACCTCTCCCTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp TGCTTCCGAGGCTTCAGTTCTGTACCATTTAATGCGTGCAAAGGACATTCCATGCCATTTCTGCGGCCCTaGGCGTTGAGGCAGAGTGCT +
Preference number: 4 (lower is better)
Translates to: CFRGFSSVPFNACKGHSMPFLRP*ALRQSA
Trigger: AGCACTCTGCCTCAACGCCCAGGGCCGCAGAAATGG...CATGGAATGTCCTTTGCACGCATTAAATGGTACAGAACTGAAGCCTCGGAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR TCA 90 bp TTTACTCAGAGGCTCAGATGGACCCTTGATTCTCCCAGGAGTCATACATTGAAGTTCTTATGGCAACGCTaGGCAGCAGCTAGGGCTCGC +
Preference number: 4 (lower is better)
Translates to: FTQRLRWTLDSPRSHTLKFLWQR*AAARAR
Trigger: GCGAGCCCTAGCTGCTGCTCAGCGTTGCCATAAGAA...CTTCAATGTATGACTCCTGGGAGAATCAAGGGTCCATCTGAGCCTCTGAGTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR TCA 90 bp ATTGTCTTTGGGGGAAACAGGCAGAATAAGTGGAGGATGGAGCTGGGGCTTGGGCCTAATGTCTTCTGGTaGTACTGCAGCACAGTCCAT +
Preference number: 4 (lower is better)
Translates to: IVFGGNRQNKWRMELGLGPNVFW*YCSTVH
Trigger: ATGGACTGTGCTGCAGTATCACCAGAAGACATTAGG...CCCAAGCCCCAGCTCCATCCTCCACTTATTCTGCCTGTTTCCCCCAAAGACAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp TCTTCTGGACTCAGGAGAGACATGTTCGCCGAGGATATCAGCTGGCTCTTACCTCCCGTCTCGTATTTCTaGTTTATCACCTCGGGCTTC +
Preference number: 4 (lower is better)
Translates to: SSGLRRDMFAEDISWLLPPVSYF*FITSGF
Trigger: GAAGCCCGAGGTGATAAAGCAGAAATACGAGACGGG...AGGTAAGAGCCAGCTGATATCCTCGGCGAACATGTCTCTCCTGAGTCCAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp ATAGTTTGTGGTTTTGCCATCTGTTACTCCTTATGCCCACCTGGAGAGGGGCTAGGGCTTGTAACACAGTaGGAGGTGGGTCACCAACAG +
Preference number: 4 (lower is better)
Translates to: IVCGFAICYSLCPPGEGLGLVTQ*EVGHQQ
Trigger: CTGTTGGTGACCCACCTCGCACTGTGTTACAAGCCC...TAGCCCCTCTCCAGGTGGGCATAAGGAGTAACAGATGGCAAAACCACAAACTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp ATGGGCCACAGCCAGGACAGACTTAAGGGCTCTCCAGGTGCCAGTCAAGATGCCAACCTTTTATGGGAGTaGAGTGCTCCTTACACAAAT +
Preference number: 4 (lower is better)
Translates to: MGHSQDRLKGSPGASQDANLLWE*SAPYTN
Trigger: ATTTGTGTAAGGAGCACTGCACTCCCATAAAAGGTT...GGCATCTTGACTGGCACCTGGAGAGCCCTTAAGTCTGTCCTGGCTGTGGCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR CCA 90 bp GCATCTTTAGGTGGGACCACCCCTGGCACAACATGGTCTCTGAGGTCCAGATACCTTGGATGCTGCATATaGAATTCTCTTCGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: ASLGGTTPGTTWSLRSRYLGCCI*NSLRRS
Trigger: TGACCTCCGAAGAGAATTCCATATGCAGCATCCAAG...GTATCTGGACCTCAGAGACCATGTTGTGCCAGGGGTGGTCCCACCTAAAGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR CCA 90 bp TGCTGGTCTTCTGGACTCAGGAGAGACATGTTCGCCGAGGATATCAGCTGGCTCCTTGGATGCTGCATATaGAATTCTCTTCGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: CWSSGLRRDMFAEDISWLLGCCI*NSLRRS
Trigger: TGACCTCCGAAGAGAATTCCATATGCAGCATCCAAG...GAGCCAGCTGATATCCTCGGCGAACATGTCTCTCCTGAGTCCAGAAGACCAGCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR CCA 90 bp TTGAAGGTACCAGAGCTTCCATTTTATAAAAGAAAGCAAGCCTGCCGTGGACCTAAGCGAGCCACGTCCTaGTCTGATGACTGCCACGGC +
Preference number: 4 (lower is better)
Translates to: LKVPELPFYKRKQACRGPKRATS*SDDCHG
Trigger: GCCGTGGCAGTCATCAGACCAGGACGTGGCTCGCTT...AGGTCCACGGCAGGCTTGCTTTCTTTTATAAAATGGAAGCTCTGGTACCTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp TTTACTCAGAGGCTCAGATGGACCCTTGATTCTCCCAGGAGTCATACATTGAAGGATGGCCGGCCCTGCTaGTTGAGCACCATGTGTACA +
Preference number: 4 (lower is better)
Translates to: FTQRLRWTLDSPRSHTLKDGRPC*LSTMCT
Trigger: TGTACACATGGTGCTCAACCAGCAGGGCCGGCCATC...CTTCAATGTATGACTCCTGGGAGAATCAAGGGTCCATCTGAGCCTCTGAGTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp GGACAGGGAGAGGTAGAACATTGGGATCTTTACTCAGAGGCTCAGATGGACCCTAACACACCCATTCCTTaGGGGCTTGTAACACAGTGC +
Preference number: 4 (lower is better)
Translates to: GQGEVEHWDLYSEAQMDPNTPIP*GLVTQC
Trigger: GCACTGTGTTACAAGCCCCCAAGGAATGGGTGTGTT...AGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAATGTTCTACCTCTCCCTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp TGCTTCCGAGGCTTCAGTTCTGTACCATTTAATGCGTGCAAAGGACATTCCATGGATGGAGCTGGGGCTTaGGCTCCTCTAGGTACCTTC +
Preference number: 4 (lower is better)
Translates to: CFRGFSSVPFNACKGHSMDGAGA*APLGTF
Trigger: GAAGGTACCTAGAGGAGCCCAAGCCCCAGCTCCATC...CATGGAATGTCCTTTGCACGCATTAAATGGTACAGAACTGAAGCCTCGGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp TTGAAGGTACCAGAGCTTCCATTTTATAAAAGAAAGCAAGCCTGCCGTGGACCTAGTGGAGGATGGAGCTaGGGCTTGGGCTCCTCTAGG +
Preference number: 4 (lower is better)
Translates to: LKVPELPFYKRKQACRGPSGGWS*GLGSSR
Trigger: CCTAGAGGAGCCCAAGCCCCAGCTCCATCCTCCACT...AGGTCCACGGCAGGCTTGCTTTCTTTTATAAAATGGAAGCTCTGGTACCTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp AAAATAGTTTGTGGTTTTGCCATCTGTTACTCCTTATGCCCACCTGGAGAGGGGGCCAGTCAAGATGCCTaGCTCAGGCCATCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: KIVCGFAICYSLCPPGEGASQDA*LRPSGA
Trigger: AGCTCCTGATGGCCTGAGCCAGGCATCTTGACTGGC...CCCCTCTCCAGGTGGGCATAAGGAGTAACAGATGGCAAAACCACAAACTATTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp TCTGGTGATACTGCAGCACAGTCCATCAAAATAGTTTGTGGTTTTGCCATCTGTGAGTGTTCCTCCGCCTaGGGTTGGTGTGGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: SGDTAAQSIKIVCGFAICECSSA*GWCGAP
Trigger: AGGGGCTCCACACCAACCCCAGGCGGAGGAACACTC...ACAGATGGCAAAACCACAAACTATTTTGATGGACTGTGCTGCAGTATCACCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR TCA 90 bp CGAGGCTTCAGTTCTGTACCATTTAATGCGTGCAAAGGACATTCCATGGTGTCTCACTTGGTCTTCCCGTaGCAAGAAACGAGCCACCTC +
Preference number: 4 (lower is better)
Translates to: RGFSSVPFNACKGHSMVSHLVFP*QETSHL
Trigger: GAGGTGGCTCGTTTCTTGTCACGGGAAGACCAAGTG...AGACACCATGGAATGTCCTTTGCACGCATTAAATGGTACAGAACTGAAGCCTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR TCA 90 bp TTGAAGGTACCAGAGCTTCCATTTTATAAAAGAAAGCAAGCCTGCCGTGGACCTTTCTTATGGCAACGCTaGGCAGCAGCTAGGGCTCGC +
Preference number: 4 (lower is better)
Translates to: LKVPELPFYKRKQACRGPFLWQR*AAARAR
Trigger: GCGAGCCCTAGCTGCTGCTCAGCGTTGCCATAAGAA...AGGTCCACGGCAGGCTTGCTTTCTTTTATAAAATGGAAGCTCTGGTACCTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR TCA 90 bp AAAATAGTTTGTGGTTTTGCCATCTGTTACTCCTTATGCCCACCTGGAGAGGGGAGGCCTGGAAGACGCTaGGCAGATCCTTCATACCAG +
Preference number: 4 (lower is better)
Translates to: KIVCGFAICYSLCPPGEGRPGRR*ADPSYQ
Trigger: CTGGTATGAAGGATCTGCTCAGCGTCTTCCAGGCCT...CCCCTCTCCAGGTGGGCATAAGGAGTAACAGATGGCAAAACCACAAACTATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR TCA 90 bp TGCTTCCGAGGCTTCAGTTCTGTACCATTTAATGCGTGCAAAGGACATTCCATGAGGCCTGGAAGACGCTaGGCAGATCCTTCATACCAG +
Preference number: 4 (lower is better)
Translates to: CFRGFSSVPFNACKGHSMRPGRR*ADPSYQ
Trigger: CTGGTATGAAGGATCTGCTCAGCGTCTTCCAGGCCT...CATGGAATGTCCTTTGCACGCATTAAATGGTACAGAACTGAAGCCTCGGAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR TCA 90 bp CATGGTGTCTGCTGGGTTCAGGGCAACTGGCTTTCCCAAGGCATACAAGAAAAGCCAGGAGTCATACATTaGAGGTACCAGAGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: HGVCWVQGNWLSQGIQEKPGVIH*RYQSFH
Trigger: ATGGAAGCTCTGGTACCTTCAATGTATGACTCCTGG...CTTTTCTTGTATGCCTTGGGAAAGCCAGTTGCCCTGAACCCAGCAGACACCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR TCA 90 bp TTGGGATCTTTACTCAGAGGCTCAGATGGACCCTTGATTCTCCCAGGAGTCATAGGTGTAGGTAGGTGGTaGGAGGCCTTCTTATGGCAA +
Preference number: 4 (lower is better)
Translates to: LGSLLRGSDGPLILPGVIGVGRW*EAFLWQ
Trigger: TTGCCATAAGAAGGCCTCTCACCACCTACCTACACC...TATGACTCCTGGGAGAATCAAGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566774.1
CDS-3UTR GCA 90 bp TGCTTCCGAGGCTTCAGTTCTGTACCATTTAATGCGTGCAAAGGACATTCCATGACCTGTCGCAATAGCTaGTGCCCATCAGTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: CFRGFSSVPFNACKGHSMTCRNS*CPSVQS
Trigger: GCTCTGCACTGATGGGCAGCAGCTATTGCGACAGGT...CATGGAATGTCCTTTGCACGCATTAAATGGTACAGAACTGAAGCCTCGGAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR GCA 90 bp CCAAATTGCTTCCGAGGCTTCAGTTCTGTACCATTTAATGCGTGCAAAGGACATCGGTTCAAGACCTGCTaGACTTCGGCTGCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: PNCFRGFSSVPFNACKGHRFKTC*TSAAVL
Trigger: GAGCACTGCAGCCGAAGTGCAGCAGGTCTTGAACCG...ATGTCCTTTGCACGCATTAAATGGTACAGAACTGAAGCCTCGGAAGCAATTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR GCA 90 bp TCTGGTGATACTGCAGCACAGTCCATCAAAATAGTTTGTGGTTTTGCCATCTGTGGGCCGAATGTCAGCTaGTGCCTCCCCCAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: SGDTAAQSIKIVCGFAICGPNVS*CLPQKA
Trigger: AGCTTTCTGGGGGAGGCAGCAGCTGACATTCGGCCC...ACAGATGGCAAAACCACAAACTATTTTGATGGACTGTGCTGCAGTATCACCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp CGAGGCTTCAGTTCTGTACCATTTAATGCGTGCAAAGGACATTCCATGGTGTCTAAAAGAAAGCAAGCCTaGCGTGGACCTGTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: RGFSSVPFNACKGHSMVSKRKQA*RGPVSP
Trigger: GGGGCTGACAGGTCCACGGCAGGCTTGCTTTCTTTT...AGACACCATGGAATGTCCTTTGCACGCATTAAATGGTACAGAACTGAAGCCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp TGCTTCCGAGGCTTCAGTTCTGTACCATTTAATGCGTGCAAAGGACATTCCATGTGTGTGGGGGCCTACTaGCCCCTAATGTCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: CFRGFSSVPFNACKGHSMCVGAY*PLMSSG
Trigger: ACCAGAAGACATTAGGGGGCAGTAGGCCCCCACACA...CATGGAATGTCCTTTGCACGCATTAAATGGTACAGAACTGAAGCCTCGGAAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp ATAGTTTGTGGTTTTGCCATCTGTTACTCCTTATGCCCACCTGGAGAGGGGCTAACATTCCATGGTGTCTaGTGGGTTCAGGGCAACTGG +
Preference number: 4 (lower is better)
Translates to: IVCGFAICYSLCPPGEGLTFHGV*WVQGNW
Trigger: CCAGTTGCCCTGAACCCAGCAGACACCATGGAATGT...TAGCCCCTCTCCAGGTGGGCATAAGGAGTAACAGATGGCAAAACCACAAACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp GTGCTGGTCTTCTGGACTCAGGAGAGACATGTTCGCCGAGGATATCAGCTGGCTGGCTCTTTGAGTAGATaGAGGATAACAGCTACCATT +
Preference number: 4 (lower is better)
Translates to: VLVFWTQERHVRRGYQLAGSLSR*RITATI
Trigger: AATGGTAGCTGTTATCCTCCATCTACTCAAAGAGCC...AGCCAGCTGATATCCTCGGCGAACATGTCTCTCCTGAGTCCAGAAGACCAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR CCA 90 bp CGAGGCTTCAGTTCTGTACCATTTAATGCGTGCAAAGGACATTCCATGGTGTCTCAGTGTAGGAAGGAGTaGGCCGGATGCATAGCGGTT +
Preference number: 4 (lower is better)
Translates to: RGFSSVPFNACKGHSMVSQCRKE*AGCIAV
Trigger: AACCGCTATGCATCCGGCCCACTCCTTCCTACACTG...AGACACCATGGAATGTCCTTTGCACGCATTAAATGGTACAGAACTGAAGCCTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp CCCAGGAGTCATACATTGAAGGTACCAGAGCTTCCATTTTATAAAAGAAAGCAAGAAGGCATCGCCCGATaGCCGGCCCTGCTGGTTGAG +
Preference number: 4 (lower is better)
Translates to: PRSHTLKVPELPFYKRKQEGIAR*PALLVE
Trigger: CTCAACCAGCAGGGCCGGCCATCGGGCGATGCCTTC...TTGCTTTCTTTTATAAAATGGAAGCTCTGGTACCTTCAATGTATGACTCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp AAAATAGTTTGTGGTTTTGCCATCTGTTACTCCTTATGCCCACCTGGAGAGGGGAGAATAAGTGGAGGATaGAGCTGGGGCTTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: KIVCGFAICYSLCPPGEGRISGG*SWGLGS
Trigger: GGAGCCCAAGCCCCAGCTCCATCCTCCACTTATTCT...CCCCTCTCCAGGTGGGCATAAGGAGTAACAGATGGCAAAACCACAAACTATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp TGCTTCCGAGGCTTCAGTTCTGTACCATTTAATGCGTGCAAAGGACATTCCATGAGAATAAGTGGAGGATaGAGCTGGGGCTTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: CFRGFSSVPFNACKGHSMRISGG*SWGLGS
Trigger: GGAGCCCAAGCCCCAGCTCCATCCTCCACTTATTCT...CATGGAATGTCCTTTGCACGCATTAAATGGTACAGAACTGAAGCCTCGGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp TCTGAGAGCTTTGACAAGCCAGAAAGAAGCTACCAGGTTGAGGGTGCTGGTCTTAACAGGCAGAATAAGTaGAGGATGGAGCTGGGGCTT +
Preference number: 4 (lower is better)
Translates to: SESFDKPERSYQVEGAGLNRQNK*RMELGL
Trigger: AAGCCCCAGCTCCATCCTCCACTTATTCTGCCTGTT...AAGACCAGCACCCTCAACCTGGTAGCTTCTTTCTGGCTTGTCAAAGCTCTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp ATAGTTTGTGGTTTTGCCATCTGTTACTCCTTATGCCCACCTGGAGAGGGGCTAACCCCTGGCACAACATaGTCTCTGAGGTCCAGATAC +
Preference number: 4 (lower is better)
Translates to: IVCGFAICYSLCPPGEGLTPGTT*SLRSRY
Trigger: GTATCTGGACCTCAGAGACCATGTTGTGCCAGGGGT...TAGCCCCTCTCCAGGTGGGCATAAGGAGTAACAGATGGCAAAACCACAAACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR TCA 90 bp AGTCATACATTGAAGGTACCAGAGCTTCCATTTTATAAAAGAAAGCAAGCCTGCGCCGGCCCTGCTGGTTaGGCACCATGTGTACACCGT +
Preference number: 4 (lower is better)
Translates to: SHTLKVPELPFYKRKQACAGPAG*APCVHR
Trigger: ACGGTGTACACATGGTGCTCAACCAGCAGGGCCGGC...GCAGGCTTGCTTTCTTTTATAAAATGGAAGCTCTGGTACCTTCAATGTATGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR TCA 90 bp CGAGGCTTCAGTTCTGTACCATTTAATGCGTGCAAAGGACATTCCATGGTGTCTGCACAACATGGTCTCTaGGGTCCAGATACTCTGAGG +
Preference number: 4 (lower is better)
Translates to: RGFSSVPFNACKGHSMVSAQHGL*GPDTLR
Trigger: CCTCAGAGTATCTGGACCTCAGAGACCATGTTGTGC...AGACACCATGGAATGTCCTTTGCACGCATTAAATGGTACAGAACTGAAGCCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR TCA 90 bp TTTACTCAGAGGCTCAGATGGACCCTTGATTCTCCCAGGAGTCATACATTGAAGGCACAACATGGTCTCTaGGGTCCAGATACTCTGAGG +
Preference number: 4 (lower is better)
Translates to: FTQRLRWTLDSPRSHTLKAQHGL*GPDTLR
Trigger: CCTCAGAGTATCTGGACCTCAGAGACCATGTTGTGC...CTTCAATGTATGACTCCTGGGAGAATCAAGGGTCCATCTGAGCCTCTGAGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp TTGGGATCTTTACTCAGAGGCTCAGATGGACCCTTGATTCTCCCAGGAGTCATACCCGTCTCGTATTTCTaGTTTATCACCTCGGGCTTC +
Preference number: 4 (lower is better)
Translates to: LGSLLRGSDGPLILPGVIPVSYF*FITSGF
Trigger: GAAGCCCGAGGTGATAAAGCAGAAATACGAGACGGG...TATGACTCCTGGGAGAATCAAGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp TCTGGTGATACTGCAGCACAGTCCATCAAAATAGTTTGTGGTTTTGCCATCTGTGTGTATGGGACACCCTaGATGCGGACCAAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: SGDTAAQSIKIVCGFAICVYGTP*MRTKAP
Trigger: AGGAGCCTTGGTCCGCATGCAGGGTGTCCCATACAC...ACAGATGGCAAAACCACAAACTATTTTGATGGACTGTGCTGCAGTATCACCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp CCAAATTGCTTCCGAGGCTTCAGTTCTGTACCATTTAATGCGTGCAAAGGACATCAGTGTAGGAAGGAGTaGGCCGGATGCATAGCGGTT +
Preference number: 4 (lower is better)
Translates to: PNCFRGFSSVPFNACKGHQCRKE*AGCIAV
Trigger: AACCGCTATGCATCCGGCCCACTCCTTCCTACACTG...ATGTCCTTTGCACGCATTAAATGGTACAGAACTGAAGCCTCGGAAGCAATTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR CCA 90 bp CCAAATTGCTTCCGAGGCTTCAGTTCTGTACCATTTAATGCGTGCAAAGGACATTCAGGATGTCTTCAATaGTGGCCGTGTAGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: PNCFRGFSSVPFNACKGHSGCLQ*WPCRAG
Trigger: GCCTGCCCTACACGGCCACCATTGAAGACATCCTGA...ATGTCCTTTGCACGCATTAAATGGTACAGAACTGAAGCCTCGGAAGCAATTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR CCA 90 bp TGCTTCCGAGGCTTCAGTTCTGTACCATTTAATGCGTGCAAAGGACATTCCATGGCCGAGGATATCAGCTaGCTCTTACCTCCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: CFRGFSSVPFNACKGHSMAEDIS*LLPPGF
Trigger: AAAGCCAGGAGGTAAGAGCCAGCTGATATCCTCGGC...CATGGAATGTCCTTTGCACGCATTAAATGGTACAGAACTGAAGCCTCGGAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp CCAAATTGCTTCCGAGGCTTCAGTTCTGTACCATTTAATGCGTGCAAAGGACATAGAATAAGTGGAGGATaGAGCTGGGGCTTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PNCFRGFSSVPFNACKGHRISGG*SWGLGS
Trigger: GGAGCCCAAGCCCCAGCTCCATCCTCCACTTATTCT...ATGTCCTTTGCACGCATTAAATGGTACAGAACTGAAGCCTCGGAAGCAATTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR CCA 90 bp TCTTCTGGACTCAGGAGAGACATGTTCGCCGAGGATATCAGCTGGCTCTTACCTGGAGAGGTAGAACATTaGGATCTTTACTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: SSGLRRDMFAEDISWLLPGEVEH*DLYSEA
Trigger: AGCCTCTGAGTAAAGATCCCAATGTTCTACCTCTCC...AGGTAAGAGCCAGCTGATATCCTCGGCGAACATGTCTCTCCTGAGTCCAGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp TGGACCCTTGATTCTCCCAGGAGTCATACATTGAAGGTACCAGAGCTTCCATTTCTCCTTATGCCCACCTaGAGAGGGGCTAGCATCTTT +
Preference number: 4 (lower is better)
Translates to: WTLDSPRSHTLKVPELPFLLMPT*RGASIF
Trigger: AAAGATGCTAGCCCCTCTCCAGGTGGGCATAAGGAG...AAATGGAAGCTCTGGTACCTTCAATGTATGACTCCTGGGAGAATCAAGGGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp TTTACTCAGAGGCTCAGATGGACCCTTGATTCTCCCAGGAGTCATACATTGAAGTTCCATGGTGTCTGCTaGGTTCAGGGCAACTGGCTT +
Preference number: 4 (lower is better)
Translates to: FTQRLRWTLDSPRSHTLKFHGVC*VQGNWL
Trigger: AAGCCAGTTGCCCTGAACCCAGCAGACACCATGGAA...CTTCAATGTATGACTCCTGGGAGAATCAAGGGTCCATCTGAGCCTCTGAGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp CGAGGCTTCAGTTCTGTACCATTTAATGCGTGCAAAGGACATTCCATGGTGTCTTTCCATGGTGTCTGCTaGGTTCAGGGCAACTGGCTT +
Preference number: 4 (lower is better)
Translates to: RGFSSVPFNACKGHSMVSFHGVC*VQGNWL
Trigger: AAGCCAGTTGCCCTGAACCCAGCAGACACCATGGAA...AGACACCATGGAATGTCCTTTGCACGCATTAAATGGTACAGAACTGAAGCCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp TGGACCCTTGATTCTCCCAGGAGTCATACATTGAAGGTACCAGAGCTTCCATTTGCAAAGGACATTCCATaGTGTCTGCTGGGTTCAGGG +
Preference number: 4 (lower is better)
Translates to: WTLDSPRSHTLKVPELPFAKDIP*CLLGSG
Trigger: CCCTGAACCCAGCAGACACCATGGAATGTCCTTTGC...AAATGGAAGCTCTGGTACCTTCAATGTATGACTCCTGGGAGAATCAAGGGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp TGCTTCCGAGGCTTCAGTTCTGTACCATTTAATGCGTGCAAAGGACATTCCATGGCAAAGGACATTCCATaGTGTCTGCTGGGTTCAGGG +
Preference number: 4 (lower is better)
Translates to: CFRGFSSVPFNACKGHSMAKDIP*CLLGSG
Trigger: CCCTGAACCCAGCAGACACCATGGAATGTCCTTTGC...CATGGAATGTCCTTTGCACGCATTAAATGGTACAGAACTGAAGCCTCGGAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp CGAGGCTTCAGTTCTGTACCATTTAATGCGTGCAAAGGACATTCCATGGTGTCTTGGAGCCCCTCACTTTaGGGCAAAGTTAAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: RGFSSVPFNACKGHSMVSWSPSL*GKVKGP
Trigger: AGGACCCTTAACTTTGCCCCAAAGTGAGGGGCTCCA...AGACACCATGGAATGTCCTTTGCACGCATTAAATGGTACAGAACTGAAGCCTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR TCA 90 bp ATTGGGATCTTTACTCAGAGGCTCAGATGGACCCTTGATTCTCCCAGGAGTCATCCTAATGTCTTCTGGTaGTACTGCAGCACAGTCCAT +
Preference number: 4 (lower is better)
Translates to: IGIFTQRLRWTLDSPRSHPNVFW*YCSTVH
Trigger: ATGGACTGTGCTGCAGTATCACCAGAAGACATTAGG...ATGACTCCTGGGAGAATCAAGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp CCAAATTGCTTCCGAGGCTTCAGTTCTGTACCATTTAATGCGTGCAAAGGACATGGCAGGGCAGGTGCTTaGATGCTGCATATGGAATTC +
Preference number: 4 (lower is better)
Translates to: PNCFRGFSSVPFNACKGHGRAGA*MLHMEF
Trigger: GAATTCCATATGCAGCATCCAAGCACCTGCCCTGCC...ATGTCCTTTGCACGCATTAAATGGTACAGAACTGAAGCCTCGGAAGCAATTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR CCA 90 bp ATAGTTTGTGGTTTTGCCATCTGTTACTCCTTATGCCCACCTGGAGAGGGGCTACAAAGTCATCCTCTGTaGCATCTGTCTCCAGTCCTA +
Preference number: 4 (lower is better)
Translates to: IVCGFAICYSLCPPGEGLQSHPL*HLSPVL
Trigger: TAGGACTGGAGACAGATGCCACAGAGGATGACTTTG...TAGCCCCTCTCCAGGTGGGCATAAGGAGTAACAGATGGCAAAACCACAAACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR CCA 90 bp ATAGTTTGTGGTTTTGCCATCTGTTACTCCTTATGCCCACCTGGAGAGGGGCTACTGGCTCTTACCTCCTaGCTTTCTCTCCTACAAACA +
Preference number: 4 (lower is better)
Translates to: IVCGFAICYSLCPPGEGLLALTS*LSLLQT
Trigger: TGTTTGTAGGAGAGAAAGCCAGGAGGTAAGAGCCAG...TAGCCCCTCTCCAGGTGGGCATAAGGAGTAACAGATGGCAAAACCACAAACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp TTTACTCAGAGGCTCAGATGGACCCTTGATTCTCCCAGGAGTCATACATTGAAGTGGGTTCAGGGCAACTaGCTTTCCCAAGGCATACAA +
Preference number: 4 (lower is better)
Translates to: FTQRLRWTLDSPRSHTLKWVQGN*LSQGIQ
Trigger: TTGTATGCCTTGGGAAAGCCAGTTGCCCTGAACCCA...CTTCAATGTATGACTCCTGGGAGAATCAAGGGTCCATCTGAGCCTCTGAGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp AGTCATACATTGAAGGTACCAGAGCTTCCATTTTATAAAAGAAAGCAAGCCTGCCCCTGGCAGGGCAGGTaGTTGGATGCTGCATATGGA +
Preference number: 4 (lower is better)
Translates to: SHTLKVPELPFYKRKQACPWQGR*LDAAYG
Trigger: TCCATATGCAGCATCCAAGCACCTGCCCTGCCAGGG...GCAGGCTTGCTTTCTTTTATAAAATGGAAGCTCTGGTACCTTCAATGTATGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR GCA 90 bp AGTCATACATTGAAGGTACCAGAGCTTCCATTTTATAAAAGAAAGCAAGCCTGCATCGCTTACCCAGCATaGCCTTGTGCCTGCGCAGTG +
Preference number: 4 (lower is better)
Translates to: SHTLKVPELPFYKRKQACIAYPA*PCACAV
Trigger: CACTGCGCAGGCACAAGGGCATGCTGGGTAAGCGAT...GCAGGCTTGCTTTCTTTTATAAAATGGAAGCTCTGGTACCTTCAATGTATGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp AGTCATACATTGAAGGTACCAGAGCTTCCATTTTATAAAAGAAAGCAAGCCTGCCGGTTCAAGACCTGCTaGACTTCGGCTGCAGTGCTC +
Preference number: 4 (lower is better)
Translates to: SHTLKVPELPFYKRKQACRFKTC*TSAAVL
Trigger: GAGCACTGCAGCCGAAGTGCAGCAGGTCTTGAACCG...GCAGGCTTGCTTTCTTTTATAAAATGGAAGCTCTGGTACCTTCAATGTATGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp TCTGAGAGCTTTGACAAGCCAGAAAGAAGCTACCAGGTTGAGGGTGCTGGTCTTGTACCATTTAATGCGTaGAAAGGACATTCCATGGTG +
Preference number: 4 (lower is better)
Translates to: SESFDKPERSYQVEGAGLVPFNA*KGHSMV
Trigger: CACCATGGAATGTCCTTTGCACGCATTAAATGGTAC...AAGACCAGCACCCTCAACCTGGTAGCTTCTTTCTGGCTTGTCAAAGCTCTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp CCCAGGAGTCATACATTGAAGGTACCAGAGCTTCCATTTTATAAAAGAAAGCAAGGCTCATCTCCTCTGTaGAACAGGGGACCACCTCCA +
Preference number: 4 (lower is better)
Translates to: PRSHTLKVPELPFYKRKQGSSPL*NRGPPP
Trigger: TGGAGGTGGTCCCCTGTTCCACAGAGGAGATGAGCC...TTGCTTTCTTTTATAAAATGGAAGCTCTGGTACCTTCAATGTATGACTCCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR CCA 90 bp AGTCATACATTGAAGGTACCAGAGCTTCCATTTTATAAAAGAAAGCAAGCCTGCGCCAGTCAAGATGCCTaGCTCAGGCCATCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: SHTLKVPELPFYKRKQACASQDA*LRPSGA
Trigger: AGCTCCTGATGGCCTGAGCCAGGCATCTTGACTGGC...GCAGGCTTGCTTTCTTTTATAAAATGGAAGCTCTGGTACCTTCAATGTATGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp ATAGTTTGTGGTTTTGCCATCTGTTACTCCTTATGCCCACCTGGAGAGGGGCTAGGAGAGGTAGAACATTaGGATCTTTACTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: IVCGFAICYSLCPPGEGLGEVEH*DLYSEA
Trigger: AGCCTCTGAGTAAAGATCCCAATGTTCTACCTCTCC...TAGCCCCTCTCCAGGTGGGCATAAGGAGTAACAGATGGCAAAACCACAAACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp AGGTACCTTCTGAGAGCTTTGACAAGCCAGAAAGAAGCTACCAGGTTGAGGGTGGCATACAAGAAAAGTTaGCAGAAAGTCCTCCCCTTT +
Preference number: 4 (lower is better)
Translates to: RYLLRALTSQKEATRLRVAYKKS*QKVLPF
Trigger: AAAGGGGAGGACTTTCTGCCAACTTTTCTTGTATGC...CACCCTCAACCTGGTAGCTTCTTTCTGGCTTGTCAAAGCTCTCAGAAGGTACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp AGTCATACATTGAAGGTACCAGAGCTTCCATTTTATAAAAGAAAGCAAGCCTGCTGTGTGGGGGCCTACTaGCCCCTAATGTCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: SHTLKVPELPFYKRKQACCVGAY*PLMSSG
Trigger: ACCAGAAGACATTAGGGGGCAGTAGGCCCCCACACA...GCAGGCTTGCTTTCTTTTATAAAATGGAAGCTCTGGTACCTTCAATGTATGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp GGGAGAGGTAGAACATTGGGATCTTTACTCAGAGGCTCAGATGGACCCTTGATTGTACCATTTAATGCGTaGAAAGGACATTCCATGGTG +
Preference number: 4 (lower is better)
Translates to: GRGRTLGSLLRGSDGPLIVPFNA*KGHSMV
Trigger: CACCATGGAATGTCCTTTGCACGCATTAAATGGTAC...AATCAAGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAATGTTCTACCTCTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp TGCTTCCGAGGCTTCAGTTCTGTACCATTTAATGCGTGCAAAGGACATTCCATGGATCGAGTTCCAAATTaGTTCCGAGGCTTCAGTTCT +
Preference number: 4 (lower is better)
Translates to: CFRGFSSVPFNACKGHSMDRVPN*FRGFSS
Trigger: AGAACTGAAGCCTCGGAAGCAATTTGGAACTCGATC...CATGGAATGTCCTTTGCACGCATTAAATGGTACAGAACTGAAGCCTCGGAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR GCA 90 bp AAAATAGTTTGTGGTTTTGCCATCTGTTACTCCTTATGCCCACCTGGAGAGGGGGATCGAGTTCCAAATTaGTTCCGAGGCTTCAGTTCT +
Preference number: 4 (lower is better)
Translates to: KIVCGFAICYSLCPPGEGDRVPN*FRGFSS
Trigger: AGAACTGAAGCCTCGGAAGCAATTTGGAACTCGATC...CCCCTCTCCAGGTGGGCATAAGGAGTAACAGATGGCAAAACCACAAACTATTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR CCA 90 bp TTGAAGGTACCAGAGCTTCCATTTTATAAAAGAAAGCAAGCCTGCCGTGGACCTCAAAGTCATCCTCTGTaGCATCTGTCTCCAGTCCTA +
Preference number: 4 (lower is better)
Translates to: LKVPELPFYKRKQACRGPQSHPL*HLSPVL
Trigger: TAGGACTGGAGACAGATGCCACAGAGGATGACTTTG...AGGTCCACGGCAGGCTTGCTTTCTTTTATAAAATGGAAGCTCTGGTACCTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR CCA 90 bp CCCAGGAGTCATACATTGAAGGTACCAGAGCTTCCATTTTATAAAAGAAAGCAAACCATGTGTACACCGTaGGGCCGAATGTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PRSHTLKVPELPFYKRKQTMCTP*GRMSAA
Trigger: AGCAGCTGACATTCGGCCCCACGGTGTACACATGGT...TTGCTTTCTTTTATAAAATGGAAGCTCTGGTACCTTCAATGTATGACTCCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp CCAAATTGCTTCCGAGGCTTCAGTTCTGTACCATTTAATGCGTGCAAAGGACATCTGGCTCTTACCTCCTaGCTTTCTCTCCTACAAACA +
Preference number: 4 (lower is better)
Translates to: PNCFRGFSSVPFNACKGHLALTS*LSLLQT
Trigger: TGTTTGTAGGAGAGAAAGCCAGGAGGTAAGAGCCAG...ATGTCCTTTGCACGCATTAAATGGTACAGAACTGAAGCCTCGGAAGCAATTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR CCA 90 bp CCCAGGAGTCATACATTGAAGGTACCAGAGCTTCCATTTTATAAAAGAAAGCAAGCTAGCATCTTTAGGTaGGACCACCCCTGGCACAAC +
Preference number: 4 (lower is better)
Translates to: PRSHTLKVPELPFYKRKQASIFR*DHPWHN
Trigger: GTTGTGCCAGGGGTGGTCCCACCTAAAGATGCTAGC...TTGCTTTCTTTTATAAAATGGAAGCTCTGGTACCTTCAATGTATGACTCCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp TTGGGATCTTTACTCAGAGGCTCAGATGGACCCTTGATTCTCCCAGGAGTCATAGCATACAAGAAAAGTTaGCAGAAAGTCCTCCCCTTT +
Preference number: 4 (lower is better)
Translates to: LGSLLRGSDGPLILPGVIAYKKS*QKVLPF
Trigger: AAAGGGGAGGACTTTCTGCCAACTTTTCTTGTATGC...TATGACTCCTGGGAGAATCAAGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp TCTTCTGGACTCAGGAGAGACATGTTCGCCGAGGATATCAGCTGGCTCTTACCTAATAGTTTGTGGTTTTaGCATCTGTTACTCCTTATG +
Preference number: 4 (lower is better)
Translates to: SSGLRRDMFAEDISWLLPNSLWF*HLLLLM
Trigger: CATAAGGAGTAACAGATGGCAAAACCACAAACTATT...AGGTAAGAGCCAGCTGATATCCTCGGCGAACATGTCTCTCCTGAGTCCAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp AAAATAGTTTGTGGTTTTGCCATCTGTTACTCCTTATGCCCACCTGGAGAGGGGGTACCATTTAATGCGTaGAAAGGACATTCCATGGTG +
Preference number: 4 (lower is better)
Translates to: KIVCGFAICYSLCPPGEGVPFNA*KGHSMV
Trigger: CACCATGGAATGTCCTTTGCACGCATTAAATGGTAC...CCCCTCTCCAGGTGGGCATAAGGAGTAACAGATGGCAAAACCACAAACTATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp CCCAGGAGTCATACATTGAAGGTACCAGAGCTTCCATTTTATAAAAGAAAGCAAGTAGAGTTGAGTGGCTaGCCCTGGATAGTAGGCAAC +
Preference number: 4 (lower is better)
Translates to: PRSHTLKVPELPFYKRKQVELSG*PWIVGN
Trigger: GTTGCCTACTATCCAGGGCCAGCCACTCAACTCTAC...TTGCTTTCTTTTATAAAATGGAAGCTCTGGTACCTTCAATGTATGACTCCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp CCCAGGAGTCATACATTGAAGGTACCAGAGCTTCCATTTTATAAAAGAAAGCAATCAGGTAGAGTTGAGTaGCTGGCCCTGGATAGTAGG +
Preference number: 4 (lower is better)
Translates to: PRSHTLKVPELPFYKRKQSGRVE*LALDSR
Trigger: CCTACTATCCAGGGCCAGCCACTCAACTCTACCTGA...TTGCTTTCTTTTATAAAATGGAAGCTCTGGTACCTTCAATGTATGACTCCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp CGAGGCTTCAGTTCTGTACCATTTAATGCGTGCAAAGGACATTCCATGGTGTCTGCATACAAGAAAAGTTaGCAGAAAGTCCTCCCCTTT +
Preference number: 4 (lower is better)
Translates to: RGFSSVPFNACKGHSMVSAYKKS*QKVLPF
Trigger: AAAGGGGAGGACTTTCTGCCAACTTTTCTTGTATGC...AGACACCATGGAATGTCCTTTGCACGCATTAAATGGTACAGAACTGAAGCCTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp TCTTCTGGACTCAGGAGAGACATGTTCGCCGAGGATATCAGCTGGCTCTTACCTTATGTTTACAGCACTTaGAATTGTGTGTTCTTGTAC +
Preference number: 4 (lower is better)
Translates to: SSGLRRDMFAEDISWLLPYVYST*NCVFLY
Trigger: GTACAAGAACACACAATTCCAAGTGCTGTAAACATA...AGGTAAGAGCCAGCTGATATCCTCGGCGAACATGTCTCTCCTGAGTCCAGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473183.7
CDS-3UTR CCA 90 bp CCCAGGAGTCATACATTGAAGGTACCAGAGCTTCCATTTTATAAAAGAAAGCAAAACAGGCAGAATAAGTaGAGGATGGAGCTGGGGCTT +
Preference number: 4 (lower is better)
Translates to: PRSHTLKVPELPFYKRKQNRQNK*RMELGL
Trigger: AAGCCCCAGCTCCATCCTCCACTTATTCTGCCTGTT...TTGCTTTCTTTTATAAAATGGAAGCTCTGGTACCTTCAATGTATGACTCCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CCA 90 bp TCTGGTGATACTGCAGCACAGTCCATCAAAATAGTTTGTGGTTTTGCCATCTGTGGCTCTTTGAGTAGATaGAGGATAACAGCTACCATT +
Preference number: 4 (lower is better)
Translates to: SGDTAAQSIKIVCGFAICGSLSR*RITATI
Trigger: AATGGTAGCTGTTATCCTCCATCTACTCAAAGAGCC...ACAGATGGCAAAACCACAAACTATTTTGATGGACTGTGCTGCAGTATCACCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR GCA 90 bp TTTACTCAGAGGCTCAGATGGACCCTTGATTCTCCCAGGAGTCATACATTGAAGAATAGTTTGTGGTTTTaGCATCTGTTACTCCTTATG +
Preference number: 4 (lower is better)
Translates to: FTQRLRWTLDSPRSHTLKNSLWF*HLLLLM
Trigger: CATAAGGAGTAACAGATGGCAAAACCACAAACTATT...CTTCAATGTATGACTCCTGGGAGAATCAAGGGTCCATCTGAGCCTCTGAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR GCA 90 bp CCCAGGAGTCATACATTGAAGGTACCAGAGCTTCCATTTTATAAAAGAAAGCAAAACCTTTTATGGGAGTaGAGTGCTCCTTACACAAAT +
Preference number: 4 (lower is better)
Translates to: PRSHTLKVPELPFYKRKQNLLWE*SAPYTN
Trigger: ATTTGTGTAAGGAGCACTGCACTCCCATAAAAGGTT...TTGCTTTCTTTTATAAAATGGAAGCTCTGGTACCTTCAATGTATGACTCCTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS GCA 90 bp GCCCGCGCCAGGCTGTCGGCGCTCAGGCCGCTCGCCTCGCGGCACTaGGTACTCAGTGCGGCCGCCTCGGCACGAACCAGCGATTTGTGC +
Preference number: 5 (lower is better)
Translates to: ARARLSALRPLASRH*VLSAAASARTSDLC
Trigger: GCACAAATCGCTGGTTCGTGCCGAGGCGGCCGCACTGAGTACGCAGTGCCGCGAGGCGAGCGGCCTGAGCGCCGACAGCCTGGCGCGGGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000251366.7
ENST00000473183.7
ENST00000562724.1
ENST00000564382.5
ENST00000565858.5
CDS GCA 90 bp GCTGTCGGCGCTCAGGCCGCTCGCCTCGCGGCACTGCGTACTCAGTaGGGCCGCCTCGGCACGAACCAGCGATTTGTGCAGCGTCCCCAC +
Preference number: 5 (lower is better)
Translates to: AVGAQAARLAALRTQ*GRLGTNQRFVQRPH
Trigger: GTGGGGACGCTGCACAAATCGCTGGTTCGTGCCGAGGCGGCCGCACTGAGTACGCAGTGCCGCGAGGCGAGCGGCCTGAGCGCCGACAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000251366.7
ENST00000473183.7
ENST00000562724.1
ENST00000564382.5
ENST00000565858.5
CDS-3UTR CAA 90 bp GTCTTCAATGGTGGCCGTGTAGGGCAGGCCTCGGAGGCGTACACAGTCCCTCCCAGCCAAGCACGTCCGTaGGCCCAGCCGAGAAGGGCA +
Preference number: 5 (lower is better)
Translates to: VFNGGRVGQASEAYTVPPSQARP*AQPRRA
Trigger: TGCCCTTCTCGGCTGGGCCAACGGACGTGCTTGGCT...GGGAGGGACTGTGTACGCCTCCGAGGCCTGCCCTACACGGCCACCATTGAAGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566774.1
CDS-3UTR CAA 90 bp CCGTGTAGGGCAGGCCTCGGAGGCGTACACAGTCCCTCCCAGTCCCAGGTGCCAGAGCGTTGGGGTGGCTaGGAAGGTGGTGTAGGTAGG +
Preference number: 5 (lower is better)
Translates to: PCRAGLGGVHSPSQSQVPERWGG*EGGVGR
Trigger: CCTACCTACACCACCTTCCAAGCCACCCCAACGCTC...TGGCACCTGGGACTGGGAGGGACTGTGTACGCCTCCGAGGCCTGCCCTACACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566774.1
CDS GCA 90 bp CGGACGCCCATGTGGTGCTTGTGTCTCTGCAGCGCTAGGTCCCGCTaGTCGCTGTCCACAAAGCGGATGAGGGCCTCGCCATTTCTGCGG +
Preference number: 5 (lower is better)
Translates to: RTPMWCLCLCSARSR*SLSTKRMRASPFLR
Trigger: CCGCAGAAATGGCGAGGCCCTCATCCGCTTTGTGGACAGCGAGCAGCGGGACCTAGCGCTGCAGAGACACAAGCACCACATGGGCGTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565213.2
ENST00000565858.5
CDS CCA 90 bp TCGCTGTCCACAAAGCGGATGAGGGCCTCGCCATTTCTGCGGCCCTaGGCGTTGAGGCAGAGTGCTACACCACCCCTGGCCACGTTGAGC +
Preference number: 5 (lower is better)
Translates to: SLSTKRMRASPFLRP*ALRQSATPPLATLS
Trigger: GCTCAACGTGGCCAGGGGTGGTGTAGCACTCTGCCTCAACGCCCAGGGCCGCAGAAATGGCGAGGCCCTCATCCGCTTTGTGGACAGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS TCA 90 bp GCGACCTCATCTGTGCAGCCTCTAGGCCCTTTTTCCTCTTCAGCCTaGGTCTCGACGCCCGCTCTTCCCGGAAGCCACCTTCGCGAGGTG +
Preference number: 5 (lower is better)
Translates to: ATSSVQPLGPFSSSA*VSTPALPGSHLREV
Trigger: CACCTCGCGAAGGTGGCTTCCGGGAAGAGCGGGCGTCGAGACTCAGGCTGAAGAGGAAAAAGGGCCTAGAGGCTGCACAGATGAGGTCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562724.1
CDS TCA 90 bp GAGGCCCAGAAGGCTCATGGTCAATGGCAGCCCCGCCTCCAGGTCTaGCCAACCGAGGGGCAGAGAAACTCCAAGGACAGAGCTCCACAC +
Preference number: 5 (lower is better)
Translates to: EAQKAHGQWQPRLQV*PTEGQRNSKDRAPH
Trigger: GTGTGGAGCTCTGTCCTTGGAGTTTCTCTGCCCCTCGGTTGGTCAGACCTGGAGGCGGGGCTGCCATTGACCATGAGCCTTCTGGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562567.6
CDS GCA 90 bp GATTTGTGCAGCGTCCCCACCTGGCGGCTCCGCGGCTCAACCACTTaGCAAACTAGGAGGATTAAGTCGGTCTCGTCCGAGCCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: DLCSVPTWRLRGSTT*QTRRIKSVSSEPRS
Trigger: GGACCTGGGCTCGGACGAGACCGACTTAATCCTCCTAGTTTGGCAAGTGGTTGAGCCGCGGAGCCGCCAGGTGGGGACGCTGCACAAATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251366.7
ENST00000473183.7
ENST00000565858.5
CDS-3UTR CAA 90 bp AGATGCCTGGCTCAGGCCATCAGGAGCTGGTTAGCCCCATTCCACCCCCAGCCCTGCAGGGTCCAGCCATaGTCTTTGGGGGAAACAGGC +
Preference number: 5 (lower is better)
Translates to: RCLAQAIRSWLAPFHPQPCRVQP*SLGETG
Trigger: GCCTGTTTCCCCCAAAGACAATGGCTGGACCCTGCA...GGGCTGGGGGTGGAATGGGGCTAACCAGCTCCTGATGGCCTGAGCCAGGCATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CAA 90 bp CCATGTGTACACCGTGGGGCCGAATGTCAGCTGCTGCCTCCCCCAGAAAGCTCATCCACCACATCAGCCTaGCTGCAAGGCCCCGTCTCG +
Preference number: 5 (lower is better)
Translates to: PCVHRGAECQLLPPPESSSTTSA*LQGPVS
Trigger: CGAGACGGGGCCTTGCAGCAAGGCTGATGTGGTGGA...TGAGCTTTCTGGGGGAGGCAGCAGCTGACATTCGGCCCCACGGTGTACACATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000566774.1
CDS-3UTR CAA 90 bp GAGAAGGGCAGTCCCCGCAGCCGCAGGATCACTTGGTCTTCCCGTGACAAGAAATTACCCAGCATGCCCTaGTGCCTGCGCAGTGCAGCC +
Preference number: 5 (lower is better)
Translates to: EKGSPRSRRITWSSRDKKLPSMP*CLRSAA
Trigger: GGCTGCACTGCGCAGGCACAAGGGCATGCTGGGTAA...TTTCTTGTCACGGGAAGACCAAGTGATCCTGCGGCTGCGGGGACTGCCCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566774.1
CDS-3UTR CAA 90 bp CTTATGCCCACCTGGAGAGGGGCTAGCATCTTTAGGTGGGACCACCCCTGGCACGAGCGTTGGGGTGGCTaGGAAGGTGGTGTAGGTAGG +
Preference number: 5 (lower is better)
Translates to: LMPTWRGASIFRWDHPWHERWGG*EGGVGR
Trigger: CCTACCTACACCACCTTCCAAGCCACCCCAACGCTC...GTGCCAGGGGTGGTCCCACCTAAAGATGCTAGCCCCTCTCCAGGTGGGCATAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CAA 90 bp GTGCTGGTCTTCTGGACTCAGGAGAGACATGTTCGCCGAGGATATCAGCTGGCTGGCCGGCCCTGCTGGTaGAGCACCATGTGTACACCG +
Preference number: 5 (lower is better)
Translates to: VLVFWTQERHVRRGYQLAGRPCW*STMCTP
Trigger: CGGTGTACACATGGTGCTCAACCAGCAGGGCCGGCC...AGCCAGCTGATATCCTCGGCGAACATGTCTCTCCTGAGTCCAGAAGACCAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CAA 90 bp GTCTTCAATGGTGGCCGTGTAGGGCAGGCCTCGGAGGCGTACACAGTCCCTCCCGTAGTTCAGGTAGAGTaGAGTGGCTGGCCCTGGATA +
Preference number: 5 (lower is better)
Translates to: VFNGGRVGQASEAYTVPPVVQVE*SGWPWI
Trigger: TATCCAGGGCCAGCCACTCAACTCTACCTGAACTAC...GGGAGGGACTGTGTACGCCTCCGAGGCCTGCCCTACACGGCCACCATTGAAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566774.1
CDS-3UTR CAA 90 bp ATGGGCCACAGCCAGGACAGACTTAAGGGCTCTCCAGGTGCCAGTCAAGATGCCACGCCCATGTGGTGCTaGTGTCTCTGCAGCGCTAGG +
Preference number: 5 (lower is better)
Translates to: MGHSQDRLKGSPGASQDATPMWC*CLCSAR
Trigger: CCTAGCGCTGCAGAGACACAAGCACCACATGGGCGT...GGCATCTTGACTGGCACCTGGAGAGCCCTTAAGTCTGTCCTGGCTGTGGCCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS GCA 90 bp ACCCACGAGCCCGTACCACAGTCTCACTGTCCACCACATCAGCCTTaGTGCTGTAGGGGCAGGGCACAGTGCTGTCAGAGCTATTCAGCT +
Preference number: 5 (lower is better)
Translates to: THEPVPQSHCPPHQP*CCRGRAQCCQSYSA
Trigger: AGCTGAATAGCTCTGACAGCACTGTGCCCTGCCCCTACAGCAGCAAGGCTGATGTGGTGGACAGTGAGACTGTGGTACGGGCTCGTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251366.7
CDS-3UTR CAA 90 bp AGATGCCTGGCTCAGGCCATCAGGAGCTGGTTAGCCCCATTCCACCCCCAGCCCGGGAGAGGTAGAACATaGGGATCTTTACTCAGAGGC +
Preference number: 5 (lower is better)
Translates to: RCLAQAIRSWLAPFHPQPGRGRT*GSLLRG
Trigger: GCCTCTGAGTAAAGATCCCAATGTTCTACCTCTCCC...GGGCTGGGGGTGGAATGGGGCTAACCAGCTCCTGATGGCCTGAGCCAGGCATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS TCA 90 bp CTAACCCTGCTGGGTCACAGATACCCTGTGCCATGGTGGCCACAGTaGGGTCCCTGGCAGGGCAGGTGCTTGGATGCTGCATATGGAATT +
Preference number: 5 (lower is better)
Translates to: LTLLGHRYPVPWWPQ*GPWQGRCLDAAYGI
Trigger: AATTCCATATGCAGCATCCAAGCACCTGCCCTGCCAGGGACCTCACTGTGGCCACCATGGCACAGGGTATCTGTGACCCAGCAGGGTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563159.5
ENST00000564465.1
CDS GCA 90 bp CACGAGCCCGTACCACAGTCTCACTGTCCACCACATCAGCCTTGCTaGTGTAGGGGCAGGGCACAGTGCTGTCAGAGCTATTCAGCTGTT +
Preference number: 5 (lower is better)
Translates to: HEPVPQSHCPPHQPC*CRGRAQCCQSYSAV
Trigger: AACAGCTGAATAGCTCTGACAGCACTGTGCCCTGCCCCTACAGCAGCAAGGCTGATGTGGTGGACAGTGAGACTGTGGTACGGGCTCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251366.7
CDS-3UTR CAA 90 bp CTTCTGGACTCAGGAGAGACATGTTCGCCGAGGATATCAGCTGGCTCTTACCTCGCACGAACCAGCGATTaGTGCAGCGTCCCCACCTGG +
Preference number: 5 (lower is better)
Translates to: LLDSGETCSPRISAGSYLARTSD*CSVPTW
Trigger: CCAGGTGGGGACGCTGCACAAATCGCTGGTTCGTGC...GAGGTAAGAGCCAGCTGATATCCTCGGCGAACATGTCTCTCCTGAGTCCAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR CAA 90 bp GTGCTGGTCTTCTGGACTCAGGAGAGACATGTTCGCCGAGGATATCAGCTGGCTGCCACGTTGAGCCCTTaGAAGAAGCGAGCCACGTCC +
Preference number: 5 (lower is better)
Translates to: VLVFWTQERHVRRGYQLAATLSP*KKRATS
Trigger: GGACGTGGCTCGCTTCTTCAAAGGGCTCAACGTGGC...AGCCAGCTGATATCCTCGGCGAACATGTCTCTCCTGAGTCCAGAAGACCAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS CCA 90 bp GCTCTCCTCCAGCAAACTCCCCAAGTGAAGGGCCGGGAGCCCTTCTaGAACAGACAAGGAATCATCATCGTGGTGCCTCCTCATCAGGAA +
Preference number: 5 (lower is better)
Translates to: ALLQQTPQVKGREPF*NRQGIIIVVPPHQE
Trigger: TTCCTGATGAGGAGGCACCACGATGATGATTCCTTGTCTGTTCCAGAAGGGCTCCCGGCCCTTCACTTGGGGAGTTTGCTGGAGGAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562567.6
CDS-3UTR CAA 90 bp TCTGAGAGCTTTGACAAGCCAGAAAGAAGCTACCAGGTTGAGGGTGCTGGTCTTGGCCGGCCCTGCTGGTaGAGCACCATGTGTACACCG +
Preference number: 5 (lower is better)
Translates to: SESFDKPERSYQVEGAGLGRPCW*STMCTP
Trigger: CGGTGTACACATGGTGCTCAACCAGCAGGGCCGGCC...AAGACCAGCACCCTCAACCTGGTAGCTTCTTTCTGGCTTGTCAAAGCTCTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CAA 90 bp GTGCTGGTCTTCTGGACTCAGGAGAGACATGTTCGCCGAGGATATCAGCTGGCTTGCAGGGTCCAGCCATaGTCTTTGGGGGAAACAGGC +
Preference number: 5 (lower is better)
Translates to: VLVFWTQERHVRRGYQLACRVQP*SLGETG
Trigger: GCCTGTTTCCCCCAAAGACAATGGCTGGACCCTGCA...AGCCAGCTGATATCCTCGGCGAACATGTCTCTCCTGAGTCCAGAAGACCAGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS CCA 90 bp CTGTGCCATGGTGGCCACAGTGAGGTCCCTGGCAGGGCAGGTGCTTaGATGCTGCATATGGAATTCTCTTCGGAGGTCATAGAAGGAGAA +
Preference number: 5 (lower is better)
Translates to: LCHGGHSEVPGRAGA*MLHMEFSSEVIEGE
Trigger: TTCTCCTTCTATGACCTCCGAAGAGAATTCCATATGCAGCATCCAAGCACCTGCCCTGCCAGGGACCTCACTGTGGCCACCATGGCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000251366.7
ENST00000473183.7
ENST00000562567.6
ENST00000562738.5
ENST00000563159.5
ENST00000564382.5
ENST00000564465.1
ENST00000565858.5
ENST00000569964.5
CDS CCA 90 bp ACATATAACCGAAGCCCTCAACACACACACTCCAGGAGTTTGGAGTaGGGCCAGAGCAAACACCTGGAGTGGGACAAGCAGGTGGGAAGG +
Preference number: 5 (lower is better)
Translates to: TYNRSPQHTHSRSLE*GQSKHLEWDKQVGR
Trigger: CCTTCCCACCTGCTTGTCCCACTCCAGGTGTTTGCTCTGGCCCCACTCCAAACTCCTGGAGTGTGTGTGTTGAGGGCTTCGGTTATATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562567.6
CDS-3UTR CAA 90 bp GGGAGAGGTAGAACATTGGGATCTTTACTCAGAGGCTCAGATGGACCCTTGATTAACTGCTGCAGCACCTaGTCCAGCGGCTCTGCCCGC +
Preference number: 5 (lower is better)
Translates to: GRGRTLGSLLRGSDGPLINCCST*SSGSAR
Trigger: GCGGGCAGAGCCGCTGGACAAGGTGCTGCAGCAGTT...AATCAAGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAATGTTCTACCTCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR CAA 90 bp ATAGTTTGTGGTTTTGCCATCTGTTACTCCTTATGCCCACCTGGAGAGGGGCTAAACTGCTGCAGCACCTaGTCCAGCGGCTCTGCCCGC +
Preference number: 5 (lower is better)
Translates to: IVCGFAICYSLCPPGEGLNCCST*SSGSAR
Trigger: GCGGGCAGAGCCGCTGGACAAGGTGCTGCAGCAGTT...TAGCCCCTCTCCAGGTGGGCATAAGGAGTAACAGATGGCAAAACCACAAACTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR CAA 90 bp GGAGAGGGGCTAGCATCTTTAGGTGGGACCACCCCTGGCACAACATGGTCTCTGACAGCTACCATTGTCTaGACTTCCCAGACCCCAAAG +
Preference number: 5 (lower is better)
Translates to: GEGLASLGGTTPGTTWSLTATIV*TSQTPK
Trigger: CTTTGGGGTCTGGGAAGTCAAGACAATGGTAGCTGT...CAGAGACCATGTTGTGCCAGGGGTGGTCCCACCTAAAGATGCTAGCCCCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR CAA 90 bp GTCTTTGGGGGAAACAGGCAGAATAAGTGGAGGATGGAGCTGGGGCTTGGGCTCGTAGTTCAGGTAGAGTaGAGTGGCTGGCCCTGGATA +
Preference number: 5 (lower is better)
Translates to: VFGGNRQNKWRMELGLGLVVQVE*SGWPWI
Trigger: TATCCAGGGCCAGCCACTCAACTCTACCTGAACTAC...GAGCCCAAGCCCCAGCTCCATCCTCCACTTATTCTGCCTGTTTCCCCCAAAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CAA 90 bp ATGGGCCACAGCCAGGACAGACTTAAGGGCTCTCCAGGTGCCAGTCAAGATGCCGTCCAGCCATTGTCTTaGGGGGAAACAGGCAGAATA +
Preference number: 5 (lower is better)
Translates to: MGHSQDRLKGSPGASQDAVQPLS*GETGRI
Trigger: TATTCTGCCTGTTTCCCCCAAAGACAATGGCTGGAC...GGCATCTTGACTGGCACCTGGAGAGCCCTTAAGTCTGTCCTGGCTGTGGCCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CAA 90 bp CCCGCAGCCGCAGGATCACTTGGTCTTCCCGTGACAAGAAACGAGCCACCTCTAGGGAGAGGTAGAACATaGGGATCTTTACTCAGAGGC +
Preference number: 5 (lower is better)
Translates to: PAAAGSLGLPVTRNEPPLGRGRT*GSLLRG
Trigger: GCCTCTGAGTAAAGATCCCAATGTTCTACCTCTCCC...TAGAGGTGGCTCGTTTCTTGTCACGGGAAGACCAAGTGATCCTGCGGCTGCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566774.1
CDS CCA 90 bp CAATCACATATAACCGAAGCCCTCAACACACACACTCCAGGAGTTTaGAGTGGGGCCAGAGCAAACACCTGGAGTGGGACAAGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: QSHITEALNTHTPGV*SGARANTWSGTSRW
Trigger: CCACCTGCTTGTCCCACTCCAGGTGTTTGCTCTGGCCCCACTCCAAACTCCTGGAGTGTGTGTGTTGAGGGCTTCGGTTATATGTGATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562567.6
CDS-3UTR CAA 90 bp AGGTACCTTCTGAGAGCTTTGACAAGCCAGAAAGAAGCTACCAGGTTGAGGGTGGCCACGTTGAGCCCTTaGAAGAAGCGAGCCACGTCC +
Preference number: 5 (lower is better)
Translates to: RYLLRALTSQKEATRLRVATLSP*KKRATS
Trigger: GGACGTGGCTCGCTTCTTCAAAGGGCTCAACGTGGC...CACCCTCAACCTGGTAGCTTCTTTCTGGCTTGTCAAAGCTCTCAGAAGGTACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CAA 90 bp TTTACTCAGAGGCTCAGATGGACCCTTGATTCTCCCAGGAGTCATACATTGAAGAGCCAAGCACGTCCGTaGGCCCAGCCGAGAAGGGCA +
Preference number: 5 (lower is better)
Translates to: FTQRLRWTLDSPRSHTLKSQARP*AQPRRA
Trigger: TGCCCTTCTCGGCTGGGCCAACGGACGTGCTTGGCT...CTTCAATGTATGACTCCTGGGAGAATCAAGGGTCCATCTGAGCCTCTGAGTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CAA 90 bp TGGACCCTTGATTCTCCCAGGAGTCATACATTGAAGGTACCAGAGCTTCCATTTAGCCAAGCACGTCCGTaGGCCCAGCCGAGAAGGGCA +
Preference number: 5 (lower is better)
Translates to: WTLDSPRSHTLKVPELPFSQARP*AQPRRA
Trigger: TGCCCTTCTCGGCTGGGCCAACGGACGTGCTTGGCT...AAATGGAAGCTCTGGTACCTTCAATGTATGACTCCTGGGAGAATCAAGGGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CAA 90 bp CGAGGCTTCAGTTCTGTACCATTTAATGCGTGCAAAGGACATTCCATGGTGTCTGGCCGGCCCTGCTGGTaGAGCACCATGTGTACACCG +
Preference number: 5 (lower is better)
Translates to: RGFSSVPFNACKGHSMVSGRPCW*STMCTP
Trigger: CGGTGTACACATGGTGCTCAACCAGCAGGGCCGGCC...AGACACCATGGAATGTCCTTTGCACGCATTAAATGGTACAGAACTGAAGCCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CAA 90 bp CCATGTGTACACCGTGGGGCCGAATGTCAGCTGCTGCCTCCCCCAGAAAGCTCATACCTTCTGAGAGCTTaGACAAGCCAGAAAGAAGCT +
Preference number: 5 (lower is better)
Translates to: PCVHRGAECQLLPPPESSYLLRA*TSQKEA
Trigger: AGCTTCTTTCTGGCTTGTCAAAGCTCTCAGAAGGTA...TGAGCTTTCTGGGGGAGGCAGCAGCTGACATTCGGCCCCACGGTGTACACATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566774.1
CDS-3UTR CAA 90 bp TCTGAGAGCTTTGACAAGCCAGAAAGAAGCTACCAGGTTGAGGGTGCTGGTCTTCCACCCCTGGCCACGTaGAGCCCTTTGAAGAAGCGA +
Preference number: 5 (lower is better)
Translates to: SESFDKPERSYQVEGAGLPPLAT*SPLKKR
Trigger: TCGCTTCTTCAAAGGGCTCAACGTGGCCAGGGGTGG...AAGACCAGCACCCTCAACCTGGTAGCTTCTTTCTGGCTTGTCAAAGCTCTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR CAA 90 bp AAAATAGTTTGTGGTTTTGCCATCTGTTACTCCTTATGCCCACCTGGAGAGGGGGCACGAACCAGCGATTaGTGCAGCGTCCCCACCTGG +
Preference number: 5 (lower is better)
Translates to: KIVCGFAICYSLCPPGEGARTSD*CSVPTW
Trigger: CCAGGTGGGGACGCTGCACAAATCGCTGGTTCGTGC...CCCCTCTCCAGGTGGGCATAAGGAGTAACAGATGGCAAAACCACAAACTATTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR CAA 90 bp TGCTTCCGAGGCTTCAGTTCTGTACCATTTAATGCGTGCAAAGGACATTCCATGTTACCCAGCATGCCCTaGTGCCTGCGCAGTGCAGCC +
Preference number: 5 (lower is better)
Translates to: CFRGFSSVPFNACKGHSMLPSMP*CLRSAA
Trigger: GGCTGCACTGCGCAGGCACAAGGGCATGCTGGGTAA...CATGGAATGTCCTTTGCACGCATTAAATGGTACAGAACTGAAGCCTCGGAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CAA 90 bp CTTCTGGACTCAGGAGAGACATGTTCGCCGAGGATATCAGCTGGCTCTTACCTCAAAGAAGCTACCAGGTaGAGGGTGCTGGTCTTCTGG +
Preference number: 5 (lower is better)
Translates to: LLDSGETCSPRISAGSYLKEATR*RVLVFW
Trigger: CCAGAAGACCAGCACCCTCAACCTGGTAGCTTCTTT...GAGGTAAGAGCCAGCTGATATCCTCGGCGAACATGTCTCTCCTGAGTCCAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CAA 90 bp ATTGGGATCTTTACTCAGAGGCTCAGATGGACCCTTGATTCTCCCAGGAGTCATACGCCCATGTGGTGCTaGTGTCTCTGCAGCGCTAGG +
Preference number: 5 (lower is better)
Translates to: IGIFTQRLRWTLDSPRSHTPMWC*CLCSAR
Trigger: CCTAGCGCTGCAGAGACACAAGCACCACATGGGCGT...ATGACTCCTGGGAGAATCAAGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR CAA 90 bp ATTGGGATCTTTACTCAGAGGCTCAGATGGACCCTTGATTCTCCCAGGAGTCATTGCAGGGTCCAGCCATaGTCTTTGGGGGAAACAGGC +
Preference number: 5 (lower is better)
Translates to: IGIFTQRLRWTLDSPRSHCRVQP*SLGETG
Trigger: GCCTGTTTCCCCCAAAGACAATGGCTGGACCCTGCA...ATGACTCCTGGGAGAATCAAGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CAA 90 bp GTGCTGGTCTTCTGGACTCAGGAGAGACATGTTCGCCGAGGATATCAGCTGGCTGGCATACAAGAAAAGTaGGCAGAAAGTCCTCCCCTT +
Preference number: 5 (lower is better)
Translates to: VLVFWTQERHVRRGYQLAGIQEK*AESPPL
Trigger: AAGGGGAGGACTTTCTGCCAACTTTTCTTGTATGCC...AGCCAGCTGATATCCTCGGCGAACATGTCTCTCCTGAGTCCAGAAGACCAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CAA 90 bp TTGAAGGTACCAGAGCTTCCATTTTATAAAAGAAAGCAAGCCTGCCGTGGACCTTCCACCACATCAGCCTaGCTGCAAGGCCCCGTCTCG +
Preference number: 5 (lower is better)
Translates to: LKVPELPFYKRKQACRGPSTTSA*LQGPVS
Trigger: CGAGACGGGGCCTTGCAGCAAGGCTGATGTGGTGGA...AGGTCCACGGCAGGCTTGCTTTCTTTTATAAAATGGAAGCTCTGGTACCTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000566774.1
CDS-3UTR CAA 90 bp TTTACTCAGAGGCTCAGATGGACCCTTGATTCTCCCAGGAGTCATACATTGAAGCCACCCCTGGCCACGTaGAGCCCTTTGAAGAAGCGA +
Preference number: 5 (lower is better)
Translates to: FTQRLRWTLDSPRSHTLKPPLAT*SPLKKR
Trigger: TCGCTTCTTCAAAGGGCTCAACGTGGCCAGGGGTGG...CTTCAATGTATGACTCCTGGGAGAATCAAGGGTCCATCTGAGCCTCTGAGTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS GCA 90 bp AGGGCCGGGAGCCCTTCTGGAACAGACAAGGAATCATCATCGTGGTaGCTCCTCATCAGGAACCACAAGAGTTGTTGGAAGATGAAAGAA +
Preference number: 5 (lower is better)
Translates to: RAGSPSGTDKESSSW*LLIRNHKSCWKMKE
Trigger: TTCTTTCATCTTCCAACAACTCTTGTGGTTCCTGATGAGGAGGCACCACGATGATGATTCCTTGTCTGTTCCAGAAGGGCTCCCGGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562567.6
CDS-3UTR CAA 90 bp GGACAGGGAGAGGTAGAACATTGGGATCTTTACTCAGAGGCTCAGATGGACCCTGGGAGAGGTAGAACATaGGGATCTTTACTCAGAGGC +
Preference number: 5 (lower is better)
Translates to: GQGEVEHWDLYSEAQMDPGRGRT*GSLLRG
Trigger: GCCTCTGAGTAAAGATCCCAATGTTCTACCTCTCCC...AGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAATGTTCTACCTCTCCCTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CAA 90 bp AGGTACCTTCTGAGAGCTTTGACAAGCCAGAAAGAAGCTACCAGGTTGAGGGTGGGGCTTCGAAAACAATaGACTGCTGGGCTCTTTGAG +
Preference number: 5 (lower is better)
Translates to: RYLLRALTSQKEATRLRVGLRKQ*TAGLFE
Trigger: CTCAAAGAGCCCAGCAGTCAATTGTTTTCGAAGCCC...CACCCTCAACCTGGTAGCTTCTTTCTGGCTTGTCAAAGCTCTCAGAAGGTACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS TCA 90 bp TCCCCCAGCCTCCATCCTTGCTGGAGAAGTATAAACACTAATCAGTaGCCCACGAACCCTCCCTGCCAATTCTGTGACACTTTACAACTT +
Preference number: 5 (lower is better)
Translates to: SPSLHPCWRSINTNQ*PTNPPCQFCDTLQL
Trigger: AAGTTGTAAAGTGTCACAGAATTGGCAGGGAGGGTTCGTGGGTCACTGATTAGTGTTTATACTTCTCCAGCAAGGATGGAGGCTGGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562567.6
CDS GCA 90 bp CAGATAACGCAGTCTTGTATGTGTCCATATTACCCACCCACAGCATaGACATACTCAGACACATGTACCCACAGTGGCTTCTCCACCCTA +
Preference number: 5 (lower is better)
Translates to: QITQSCMCPYYPPTA*TYSDTCTHSGFSTL
Trigger: TAGGGTGGAGAAGCCACTGTGGGTACATGTGTCTGAGTATGTGCATGCTGTGGGTGGGTAATATGGACACATACAAGACTGCGTTATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563159.5
ENST00000564465.1
CDS GCA 90 bp ACTAATCCTGTTTACTCCTGGGCCCAACTCCCCTCCATAGACACATaGTGGAGACCAGCATACACATTTGTTTTGGCCCAGTTCATGTGT +
Preference number: 5 (lower is better)
Translates to: TNPVYSWAQLPSIDT*WRPAYTFVLAQFMC
Trigger: ACACATGAACTGGGCCAAAACAAATGTGTATGCTGGTCTCCAGCATGTGTCTATGGAGGGGAGTTGGGCCCAGGAGTAAACAGGATTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563159.5
ENST00000564465.1
CDS-3UTR CAA 90 bp AGTCATACATTGAAGGTACCAGAGCTTCCATTTTATAAAAGAAAGCAAGCCTGCTTACCCAGCATGCCCTaGTGCCTGCGCAGTGCAGCC +
Preference number: 5 (lower is better)
Translates to: SHTLKVPELPFYKRKQACLPSMP*CLRSAA
Trigger: GGCTGCACTGCGCAGGCACAAGGGCATGCTGGGTAA...GCAGGCTTGCTTTCTTTTATAAAATGGAAGCTCTGGTACCTTCAATGTATGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CAA 90 bp TTGGGATCTTTACTCAGAGGCTCAGATGGACCCTTGATTCTCCCAGGAGTCATAAAACACACCCATTCCTaGGGGGCTTGTAACACAGTG +
Preference number: 5 (lower is better)
Translates to: LGSLLRGSDGPLILPGVIKHTHS*GACNTV
Trigger: CACTGTGTTACAAGCCCCCAAGGAATGGGTGTGTTT...TATGACTCCTGGGAGAATCAAGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CAA 90 bp TGCTTCCGAGGCTTCAGTTCTGTACCATTTAATGCGTGCAAAGGACATTCCATGAAAGAAGCTACCAGGTaGAGGGTGCTGGTCTTCTGG +
Preference number: 5 (lower is better)
Translates to: CFRGFSSVPFNACKGHSMKEATR*RVLVFW
Trigger: CCAGAAGACCAGCACCCTCAACCTGGTAGCTTCTTT...CATGGAATGTCCTTTGCACGCATTAAATGGTACAGAACTGAAGCCTCGGAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CAA 90 bp AAAATAGTTTGTGGTTTTGCCATCTGTTACTCCTTATGCCCACCTGGAGAGGGGAAAGAAGCTACCAGGTaGAGGGTGCTGGTCTTCTGG +
Preference number: 5 (lower is better)
Translates to: KIVCGFAICYSLCPPGEGKEATR*RVLVFW
Trigger: CCAGAAGACCAGCACCCTCAACCTGGTAGCTTCTTT...CCCCTCTCCAGGTGGGCATAAGGAGTAACAGATGGCAAAACCACAAACTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CAA 90 bp TTTACTCAGAGGCTCAGATGGACCCTTGATTCTCCCAGGAGTCATACATTGAAGGGGCTTCGAAAACAATaGACTGCTGGGCTCTTTGAG +
Preference number: 5 (lower is better)
Translates to: FTQRLRWTLDSPRSHTLKGLRKQ*TAGLFE
Trigger: CTCAAAGAGCCCAGCAGTCAATTGTTTTCGAAGCCC...CTTCAATGTATGACTCCTGGGAGAATCAAGGGTCCATCTGAGCCTCTGAGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR CAA 90 bp AGTCATACATTGAAGGTACCAGAGCTTCCATTTTATAAAAGAAAGCAAGCCTGCGAGCGTTGGGGTGGCTaGGAAGGTGGTGTAGGTAGG +
Preference number: 5 (lower is better)
Translates to: SHTLKVPELPFYKRKQACERWGG*EGGVGR
Trigger: CCTACCTACACCACCTTCCAAGCCACCCCAACGCTC...GCAGGCTTGCTTTCTTTTATAAAATGGAAGCTCTGGTACCTTCAATGTATGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CAA 90 bp CCAAATTGCTTCCGAGGCTTCAGTTCTGTACCATTTAATGCGTGCAAAGGACATGTAGTTCAGGTAGAGTaGAGTGGCTGGCCCTGGATA +
Preference number: 5 (lower is better)
Translates to: PNCFRGFSSVPFNACKGHVVQVE*SGWPWI
Trigger: TATCCAGGGCCAGCCACTCAACTCTACCTGAACTAC...ATGTCCTTTGCACGCATTAAATGGTACAGAACTGAAGCCTCGGAAGCAATTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR CAA 90 bp TGCTTCCGAGGCTTCAGTTCTGTACCATTTAATGCGTGCAAAGGACATTCCATGGTCCAGCCATTGTCTTaGGGGGAAACAGGCAGAATA +
Preference number: 5 (lower is better)
Translates to: CFRGFSSVPFNACKGHSMVQPLS*GETGRI
Trigger: TATTCTGCCTGTTTCCCCCAAAGACAATGGCTGGAC...CATGGAATGTCCTTTGCACGCATTAAATGGTACAGAACTGAAGCCTCGGAAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CAA 90 bp TGCTGGTCTTCTGGACTCAGGAGAGACATGTTCGCCGAGGATATCAGCTGGCTCGTCCATCAAAATAGTTaGTGGTTTTGCCATCTGTTA +
Preference number: 5 (lower is better)
Translates to: CWSSGLRRDMFAEDISWLVHQNS*WFCHLL
Trigger: TAACAGATGGCAAAACCACAAACTATTTTGATGGAC...GAGCCAGCTGATATCCTCGGCGAACATGTCTCTCCTGAGTCCAGAAGACCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CAA 90 bp GGGAGAGGTAGAACATTGGGATCTTTACTCAGAGGCTCAGATGGACCCTTGATTAGATCGAGTTCCAAATaGCTTCCGAGGCTTCAGTTC +
Preference number: 5 (lower is better)
Translates to: GRGRTLGSLLRGSDGPLIRSSSK*LPRLQF
Trigger: GAACTGAAGCCTCGGAAGCAATTTGGAACTCGATCT...AATCAAGGGTCCATCTGAGCCTCTGAGTAAAGATCCCAATGTTCTACCTCTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR CAA 90 bp TCTGGTGATACTGCAGCACAGTCCATCAAAATAGTTTGTGGTTTTGCCATCTGTATACACCTGGCCACGTaGAGCCCTTTGAAGAAGCGA +
Preference number: 5 (lower is better)
Translates to: SGDTAAQSIKIVCGFAICIHLAT*SPLKKR
Trigger: TCGCTTCTTCAAAGGGCTCAACGTGGCCAGGTGTAT...ACAGATGGCAAAACCACAAACTATTTTGATGGACTGTGCTGCAGTATCACCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566774.1
CDS-3UTR CAA 90 bp TTGAAGGTACCAGAGCTTCCATTTTATAAAAGAAAGCAAGCCTGCCGTGGACCTAAACACACCCATTCCTaGGGGGCTTGTAACACAGTG +
Preference number: 5 (lower is better)
Translates to: LKVPELPFYKRKQACRGPKHTHS*GACNTV
Trigger: CACTGTGTTACAAGCCCCCAAGGAATGGGTGTGTTT...AGGTCCACGGCAGGCTTGCTTTCTTTTATAAAATGGAAGCTCTGGTACCTTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CAA 90 bp CGAGGCTTCAGTTCTGTACCATTTAATGCGTGCAAAGGACATTCCATGGTGTCTAGATCGAGTTCCAAATaGCTTCCGAGGCTTCAGTTC +
Preference number: 5 (lower is better)
Translates to: RGFSSVPFNACKGHSMVSRSSSK*LPRLQF
Trigger: GAACTGAAGCCTCGGAAGCAATTTGGAACTCGATCT...AGACACCATGGAATGTCCTTTGCACGCATTAAATGGTACAGAACTGAAGCCTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR CAA 90 bp TCTGGTGATACTGCAGCACAGTCCATCAAAATAGTTTGTGGTTTTGCCATCTGTGTCCAGCCATTGTCTTaGGGGGAAACAGGCAGAATA +
Preference number: 5 (lower is better)
Translates to: SGDTAAQSIKIVCGFAICVQPLS*GETGRI
Trigger: TATTCTGCCTGTTTCCCCCAAAGACAATGGCTGGAC...ACAGATGGCAAAACCACAAACTATTTTGATGGACTGTGCTGCAGTATCACCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CAA 90 bp TCTTCTGGACTCAGGAGAGACATGTTCGCCGAGGATATCAGCTGGCTCTTACCTGTCCATCAAAATAGTTaGTGGTTTTGCCATCTGTTA +
Preference number: 5 (lower is better)
Translates to: SSGLRRDMFAEDISWLLPVHQNS*WFCHLL
Trigger: TAACAGATGGCAAAACCACAAACTATTTTGATGGAC...AGGTAAGAGCCAGCTGATATCCTCGGCGAACATGTCTCTCCTGAGTCCAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CAA 90 bp CCAAATTGCTTCCGAGGCTTCAGTTCTGTACCATTTAATGCGTGCAAAGGACATGGCATACAAGAAAAGTaGGCAGAAAGTCCTCCCCTT +
Preference number: 5 (lower is better)
Translates to: PNCFRGFSSVPFNACKGHGIQEK*AESPPL
Trigger: AAGGGGAGGACTTTCTGCCAACTTTTCTTGTATGCC...ATGTCCTTTGCACGCATTAAATGGTACAGAACTGAAGCCTCGGAAGCAATTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS-3UTR CAA 90 bp TCTGGTGATACTGCAGCACAGTCCATCAAAATAGTTTGTGGTTTTGCCATCTGTTACCTTCTGAGAGCTTaGACAAGCCAGAAAGAAGCT +
Preference number: 5 (lower is better)
Translates to: SGDTAAQSIKIVCGFAICYLLRA*TSQKEA
Trigger: AGCTTCTTTCTGGCTTGTCAAAGCTCTCAGAAGGTA...ACAGATGGCAAAACCACAAACTATTTTGATGGACTGTGCTGCAGTATCACCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CAA 90 bp AAAATAGTTTGTGGTTTTGCCATCTGTTACTCCTTATGCCCACCTGGAGAGGGGGTCCATCAAAATAGTTaGTGGTTTTGCCATCTGTTA +
Preference number: 5 (lower is better)
Translates to: KIVCGFAICYSLCPPGEGVHQNS*WFCHLL
Trigger: TAACAGATGGCAAAACCACAAACTATTTTGATGGAC...CCCCTCTCCAGGTGGGCATAAGGAGTAACAGATGGCAAAACCACAAACTATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS-3UTR CAA 90 bp AGTCATACATTGAAGGTACCAGAGCTTCCATTTTATAAAAGAAAGCAAGCCTGCGGCATACAAGAAAAGTaGGCAGAAAGTCCTCCCCTT +
Preference number: 5 (lower is better)
Translates to: SHTLKVPELPFYKRKQACGIQEK*AESPPL
Trigger: AAGGGGAGGACTTTCTGCCAACTTTTCTTGTATGCC...GCAGGCTTGCTTTCTTTTATAAAATGGAAGCTCTGGTACCTTCAATGTATGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565858.5
ENST00000566774.1
CDS GCA 72 bp AGGCTGTCGGCGCTCAGGCCGCTCGCCTCGCGGCACTaGGTACTCAGTGCGGCCGCCTCGGCACGAACCAGC +
Preference number: 6 (lower is better)
Translates to: RLSALRPLASRH*VLSAAASARTS
Trigger: GCTGGTTCGTGCCGAGGCGGCCGCACTGAGTACGCAGTGCCGCGAGGCGAGCGGCCTGAGCGCCGACAGCCT
74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000251366.7
ENST00000473183.7
ENST00000562724.1
ENST00000564382.5
ENST00000565858.5
ENST00000569964.5
CDS GCA 72 bp GCTCAGGCCGCTCGCCTCGCGGCACTGCGTACTCAGTaGGGCCGCCTCGGCACGAACCAGCGATTTGTGCAG +
Preference number: 6 (lower is better)
Translates to: AQAARLAALRTQ*GRLGTNQRFVQ
Trigger: CTGCACAAATCGCTGGTTCGTGCCGAGGCGGCCGCACTGAGTACGCAGTGCCGCGAGGCGAGCGGCCTGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000251366.7
ENST00000473183.7
ENST00000562724.1
ENST00000564382.5
ENST00000565858.5
CDS CCA 72 bp CACAGCACAGGGTCACAGCGTCCCCGCCCGAAGGTCTaGGCGCTACTCGGTCTCCTTCTCGCCCCTCCTGGC +
Preference number: 6 (lower is better)
Translates to: HSTGSQRPRPKV*ALLGLLLAPPG
Trigger: GCCAGGAGGGGCGAGAAGGAGACCGAGTAGCGCCCAGACCTTCGGGCGGGGACGCTGTGACCCTGTGCTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562724.1
CDS CAA 72 bp GTACTCAGTGCGGCCGCCTCGGCACGAACCAGCGATTaGTGCAGCGTCCCCACCTGGCGGCTCCGCGGCTCA +
Preference number: 6 (lower is better)
Translates to: VLSAAASARTSD*CSVPTWRLRGS
Trigger: TGAGCCGCGGAGCCGCCAGGTGGGGACGCTGCACAAATCGCTGGTTCGTGCCGAGGCGGCCGCACTGAGTAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251366.7
ENST00000473183.7
ENST00000564382.5
ENST00000565858.5
CDS GCA 72 bp CTCAGTGCGGCCGCCTCGGCACGAACCAGCGATTTGTaGAGCGTCCCCACAGCACAGGGTCACAGCGTCCCC +
Preference number: 6 (lower is better)
Translates to: LSAAASARTSDL*SVPTAQGHSVP
Trigger: GGGGACGCTGTGACCCTGTGCTGTGGGGACGCTGCACAAATCGCTGGTTCGTGCCGAGGCGGCCGCACTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562724.1
CDS CAA 72 bp CGGATGAGGGCCTCGCCATTTCTGCGGCCCTGGGCGTaGAGGCAGAGTGCTACACCACCCCTGGCCACGTTG +
Preference number: 6 (lower is better)
Translates to: RMRASPFLRPWA*RQSATPPLATL
Trigger: CAACGTGGCCAGGGGTGGTGTAGCACTCTGCCTCAACGCCCAGGGCCGCAGAAATGGCGAGGCCCTCATCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS CCA 72 bp ACAAAGCGGATGAGGGCCTCGCCATTTCTGCGGCCCTaGGCGTTGAGGCAGAGTGCTACACCACCCCTGGCC +
Preference number: 6 (lower is better)
Translates to: TKRMRASPFLRP*ALRQSATPPLA
Trigger: GGCCAGGGGTGGTGTAGCACTCTGCCTCAACGCCCAGGGCCGCAGAAATGGCGAGGCCCTCATCCGCTTTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS CAA 72 bp GTACTCAGTGCGGCCGCCTCGGCACGAACCAGCGATTaGTGCAGCGTCCCCACAGCACAGGGTCACAGCGTC +
Preference number: 6 (lower is better)
Translates to: VLSAAASARTSD*CSVPTAQGHSV
Trigger: GACGCTGTGACCCTGTGCTGTGGGGACGCTGCACAAATCGCTGGTTCGTGCCGAGGCGGCCGCACTGAGTAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562724.1
CDS TCA 72 bp TGGGTACAGAGAGCAGCAGCCCATGGGTCTCAGGCCTaGCTCAGATTGGCCCTGCTCCGCTCCCAGCCCAAA +
Preference number: 6 (lower is better)
Translates to: WVQRAAAHGSQA*LRLALLRSQPK
Trigger: TTTGGGCTGGGAGCGGAGCAGGGCCAATCTGAGTCAGGCCTGAGACCCATGGGCTGCTGCTCTCTGTACCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565213.2
CDS GCA 72 bp AGCGTCCCCACCTGGCGGCTCCGCGGCTCAACCACTTaGCAAACTAGGAGGATTAAGTCGGTCTCGTCCGAG +
Preference number: 6 (lower is better)
Translates to: SVPTWRLRGSTT*QTRRIKSVSSE
Trigger: CTCGGACGAGACCGACTTAATCCTCCTAGTTTGGCAAGTGGTTGAGCCGCGGAGCCGCCAGGTGGGGACGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251366.7
ENST00000473183.7
ENST00000565858.5
CDS GCA 72 bp ATGTGGTGCTTGTGTCTCTGCAGCGCTAGGTCCCGCTaGTCGCTGTCCACAAAGCGGATGAGGGCCTCGCCA +
Preference number: 6 (lower is better)
Translates to: MWCLCLCSARSR*SLSTKRMRASP
Trigger: TGGCGAGGCCCTCATCCGCTTTGTGGACAGCGAGCAGCGGGACCTAGCGCTGCAGAGACACAAGCACCACAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473183.7
ENST00000565213.2
ENST00000565858.5
CDS GCA 72 bp CCCGTACCACAGTCTCACTGTCCACCACATCAGCCTTaGTGCTGTAGGGGCAGGGCACAGTGCTGTCAGAGC +
Preference number: 6 (lower is better)
Translates to: PVPQSHCPPHQP*CCRGRAQCCQS
Trigger: GCTCTGACAGCACTGTGCCCTGCCCCTACAGCAGCAAGGCTGATGTGGTGGACAGTGAGACTGTGGTACGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251366.7
ENST00000565858.5
CDS TCA 72 bp TCTGTGCAGCCTCTAGGCCCTTTTTCCTCTTCAGCCTaGGTCTCGACGCCCGCTCTTCCCGGAAGCCACCTT +
Preference number: 6 (lower is better)
Translates to: SVQPLGPFSSSA*VSTPALPGSHL
Trigger: AAGGTGGCTTCCGGGAAGAGCGGGCGTCGAGACTCAGGCTGAAGAGGAAAAAGGGCCTAGAGGCTGCACAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562724.1
CDS GCA 72 bp CCTTTGAAGAAGCGAGCCACGTCCTGGTCTGATGACTaGCACGGCAACCCACGAGCCCGTACCACAGTCTCA +
Preference number: 6 (lower is better)
Translates to: PLKKRATSWSDD*HGNPRARTTVS
Trigger: TGAGACTGTGGTACGGGCTCGTGGGTTGCCGTGGCAGTCATCAGACCAGGACGTGGCTCGCTTCTTCAAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000251366.7
ENST00000473183.7
ENST00000562738.5
ENST00000565858.5
ENST00000566774.1
CDS CAA 72 bp CAGAGTGCTACACCACCCCTGGCCACGTTGAGCCCTTaGAAGAAGCGAGCCACGTCCTGGTCTGATGACTGC +
Preference number: 6 (lower is better)
Translates to: QSATPPLATLSP*KKRATSWSDDC
Trigger: GCAGTCATCAGACCAGGACGTGGCTCGCTTCTTCAAAGGGCTCAACGTGGCCAGGGGTGGTGTAGCACTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473183.7
ENST00000565858.5
CDS CCA 72 bp CGAAGCCCTCAACACACACACTCCAGGAGTTTGGAGTaGGGCCAGAGCAAACACCTGGAGTGGGACAAGCAG +
Preference number: 6 (lower is better)
Translates to: RSPQHTHSRSLE*GQSKHLEWDKQ
Trigger: CTGCTTGTCCCACTCCAGGTGTTTGCTCTGGCCCCACTCCAAACTCCTGGAGTGTGTGTGTTGAGGGCTTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562567.6
CDS CCA 72 bp CAGCAAACTCCCCAAGTGAAGGGCCGGGAGCCCTTCTaGAACAGACAAGGAATCATCATCGTGGTGCCTCCT +
Preference number: 6 (lower is better)
Translates to: QQTPQVKGREPF*NRQGIIIVVPP
Trigger: AGGAGGCACCACGATGATGATTCCTTGTCTGTTCCAGAAGGGCTCCCGGCCCTTCACTTGGGGAGTTTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562567.6
CDS CAA 72 bp CCCTGTCGCTTTATACACCTGGCCACGTTGAGCCCTTaGAAGAAGCGAGCCACGTCCTGGTCTGATGACTGC +
Preference number: 6 (lower is better)
Translates to: PCRFIHLATLSP*KKRATSWSDDC
Trigger: GCAGTCATCAGACCAGGACGTGGCTCGCTTCTTCAAAGGGCTCAACGTGGCCAGGTGTATAAAGCGACAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251366.7
ENST00000566774.1
CDS CCA 72 bp ATAACCGAAGCCCTCAACACACACACTCCAGGAGTTTaGAGTGGGGCCAGAGCAAACACCTGGAGTGGGACA +
Preference number: 6 (lower is better)
Translates to: ITEALNTHTPGV*SGARANTWSGT
Trigger: TGTCCCACTCCAGGTGTTTGCTCTGGCCCCACTCCAAACTCCTGGAGTGTGTGTGTTGAGGGCTTCGGTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562567.6
CDS CAA 72 bp TATAACCGAAGCCCTCAACACACACACTCCAGGAGTTaGGAGTGGGGCCAGAGCAAACACCTGGAGTGGGAC +
Preference number: 6 (lower is better)
Translates to: YNRSPQHTHSRS*EWGQSKHLEWD
Trigger: GTCCCACTCCAGGTGTTTGCTCTGGCCCCACTCCAAACTCCTGGAGTGTGTGTGTTGAGGGCTTCGGTTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562567.6
CDS CAA 90 bp GCAATCACATATAACCGAAGCCCTCAACACACACACTCCAGGAGTTaGGAGTGGGGCCAGAGCAAACACCTGGAGTGGGACAAGCAGGTG +
Preference number: 6 (lower is better)
Translates to: AITYNRSPQHTHSRS*EWGQSKHLEWDKQV
Trigger: CACCTGCTTGTCCCACTCCAGGTGTTTGCTCTGGCCCCACTCCAAACTCCTGGAGTGTGTGTGTTGAGGGCTTCGGTTATATGTGATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562567.6
CDS CAA 90 bp CTGCTGGGCTCTTTGAGTAGATGGAGGATAACAGCTACCATTGTCTaGACTTCCCAGACCCCAAAGTCATCCTCTGTGGCATCTGTCTCC +
Preference number: 6 (lower is better)
Translates to: LLGSLSRWRITATIV*TSQTPKSSSVASVS
Trigger: GGAGACAGATGCCACAGAGGATGACTTTGGGGTCTGGGAAGTCAAGACAATGGTAGCTGTTATCCTCCATCTACTCAAAGAGCCCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000251366.7
ENST00000473183.7
ENST00000562567.6
ENST00000562738.5
ENST00000565858.5
ENST00000569964.5
CDS TCA 72 bp TCACAGTGGGGAGGAGCAATAGGCATTTGTCATCCCTaGGAACAGGTGACAGGCAGTGAGGGAAACCTTACT +
Preference number: 6 (lower is better)
Translates to: SQWGGAIGICHP*EQVTGSEGNLT
Trigger: AGTAAGGTTTCCCTCACTGCCTGTCACCTGTTCTCAGGGATGACAAATGCCTATTGCTCCTCCCCACTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562567.6
ENST00000569964.5
CDS CAA 90 bp CTCCCCTCCATAGACACATGCTGGAGACCAGCATACACATTTGTTTaGGCCCAGTTCATGTGTGCACATACAGATTCCCAGTCCAGACAT +
Preference number: 6 (lower is better)
Translates to: LPSIDTCWRPAYTFV*AQFMCAHTDSQSRH
Trigger: ATGTCTGGACTGGGAATCTGTATGTGCACACATGAACTGGGCCAAAACAAATGTGTATGCTGGTCTCCAGCATGTGTCTATGGAGGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563159.5
ENST00000564465.1
CDS TCA 72 bp CTCCATCCTTGCTGGAGAAGTATAAACACTAATCAGTaGCCCACGAACCCTCCCTGCCAATTCTGTGACACT +
Preference number: 6 (lower is better)
Translates to: LHPCWRSINTNQ*PTNPPCQFCDT
Trigger: AGTGTCACAGAATTGGCAGGGAGGGTTCGTGGGTCACTGATTAGTGTTTATACTTCTCCAGCAAGGATGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562567.6
CDS CCA 72 bp GTGAGGGAAACCTTACTGCTGGGCTCTTTGAGTAGATaGAGGATAACAGCTACCATTGTCTTGACTTCCCAG +
Preference number: 6 (lower is better)
Translates to: VRETLLLGSLSR*RITATIVLTSQ
Trigger: CTGGGAAGTCAAGACAATGGTAGCTGTTATCCTCCATCTACTCAAAGAGCCCAGCAGTAAGGTTTCCCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562567.6
ENST00000569964.5
CDS CAA 72 bp CACAGTACACTCAGGGACTTAGCAGATAACGCAGTCTaGTATGTGTCCATATTACCCACCCACAGCATGCAC +
Preference number: 6 (lower is better)
Translates to: HSTLRDLADNAV*YVSILPTHSMH
Trigger: GTGCATGCTGTGGGTGGGTAATATGGACACATACAAGACTGCGTTATCTGCTAAGTCCCTGAGTGTACTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563159.5
ENST00000564465.1
CDS CAA 90 bp ACACGAAGACACAGTACACTCAGGGACTTAGCAGATAACGCAGTCTaGTATGTGTCCATATTACCCACCCACAGCATGCACATACTCAGA +
Preference number: 6 (lower is better)
Translates to: TRRHSTLRDLADNAV*YVSILPTHSMHILR
Trigger: TCTGAGTATGTGCATGCTGTGGGTGGGTAATATGGACACATACAAGACTGCGTTATCTGCTAAGTCCCTGAGTGTACTGTGTCTTCGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563159.5
ENST00000564465.1
CDS CAA 72 bp TCTTTGAGTAGATGGAGGATAACAGCTACCATTGTCTaGACTTCCCAGACCCCAAAGTCATCCTCTGTGGCA +
Preference number: 6 (lower is better)
Translates to: SLSRWRITATIV*TSQTPKSSSVA
Trigger: TGCCACAGAGGATGACTTTGGGGTCTGGGAAGTCAAGACAATGGTAGCTGTTATCCTCCATCTACTCAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000251366.7
ENST00000473183.7
ENST00000562567.6
ENST00000562738.5
ENST00000565858.5
ENST00000569964.5