RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ESRP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000104413

Ensembl transcript IDs: ENST00000358397.9, ENST00000423620.6, ENST00000433389.8, ENST00000454170.7, ENST00000517556.1, ENST00000517610.1, ENST00000519505.5, ENST00000520385.1, ENST00000522756.6, ENST00000646773.1

Found 501 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp CTTCTCCGTTCCTTCGACCCTGAGCATTCAGACAAAGTGCTGCACCTCCCTTGGCACTCTCTCTGGATCTaGAAACCTGTGATCTGGGCG +
Preference number: 2 (lower is better)
Translates to: LLRSFDPEHSDKVLHLPWHSLWI*KPVIWA
Trigger: CGCCCAGATCACAGGTTTTCAGATCCAGAGAGAGTG...CCAAGGGAGGTGCAGCACTTTGTCTGAATGCTCAGGGTCGAAGGAACGGAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522756.6
3UTR-3UTR TCA 90 bp CCATGTGATGTTTGTGCCTCTGTAGTGCTAGGTCTCGGTGCTCCTCACTTACAAGGATCTGAAAACCTGTaGTCTGGGCGGCTGAGGCAG +
Preference number: 2 (lower is better)
Translates to: PCDVCASVVLGLGAPHLQGSENL*SGRLRQ
Trigger: CTGCCTCAGCCGCCCAGATCACAGGTTTTCAGATCC...TTGTAAGTGAGGAGCACCGAGACCTAGCACTACAGAGGCACAAACATCACATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522756.6
3UTR-3UTR TCA 90 bp TCTGAAGACTGCCATGGTAAACCTCGTGCCCTGACTACGGTGTTATCATCAATAAGGCGAAGGTTGCAGTaGGCCGAGATCACGCCATTT +
Preference number: 2 (lower is better)
Translates to: SEDCHGKPRALTTVLSSIRRRLQ*AEITPF
Trigger: AAATGGCGTGATCTCGGCTCACTGCAACCTTCGCCT...TATTGATGATAACACCGTAGTCAGGGCACGAGGTTTACCATGGCAGTCTTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522756.6
3UTR-3UTR CCA 90 bp GCCCTGACTACGGTGTTATCATCAATAAGTTCCATCTTGCTGCAAGTTCCACTTCATTTCACTCCAGCCTaGGTAACAGAGGGAGGCTCT +
Preference number: 2 (lower is better)
Translates to: ALTTVLSSISSILLQVPLHFTPA*VTEGGS
Trigger: AGAGCCTCCCTCTGTTACCCAGGCTGGAGTGAAATG...AAGTGGAACTTGCAGCAAGATGGAACTTATTGATGATAACACCGTAGTCAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522756.6
3UTR-3UTR TCA 90 bp CTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTTGCTTCCTTAGGAAACACCTATaGTGCCACTTTAACTGGAAG +
Preference number: 2 (lower is better)
Translates to: LLQLKGHCQSAEEGNVCFLRKHL*CHFNWK
Trigger: CTTCCAGTTAAAGTGGCATCATAGGTGTTTCCTAAG...GAAGCAAACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
3UTR-3UTR TCA 90 bp CTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTTGCTTCCATAGTGTTAAACACTaGCAGCATCAGTACCTGTTC +
Preference number: 2 (lower is better)
Translates to: LLQLKGHCQSAEEGNVCFHSVKH*QHQYLF
Trigger: GAACAGGTACTGATGCTGTCAGTGTTTAACACTATG...GAAGCAAACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
3UTR-3UTR TCA 90 bp TTCTTCCTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTCTTAGGAAACACCTATaGTGCCACTTTAACTGGAAG +
Preference number: 2 (lower is better)
Translates to: FFLLQLKGHCQSAEEGNVLRKHL*CHFNWK
Trigger: CTTCCAGTTAAAGTGGCATCATAGGTGTTTCCTAAG...AACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAGGAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
3UTR-3UTR TCA 90 bp ACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTTAGGAAACACCTATaGTGCCACTTTAACTGGAAG +
Preference number: 2 (lower is better)
Translates to: TASVPVLIASVFTSQSSMLRKHL*CHFNWK
Trigger: CTTCCAGTTAAAGTGGCATCATAGGTGTTTCCTAAG...CATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAACAGGTACTGATGCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
3UTR-3UTR TCA 90 bp GCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTCCCATTGCCAGTCAGCTaGAGAAGGAAATGTTTGCTT +
Preference number: 2 (lower is better)
Translates to: ALGSFGHLKASSIQKFLFPLPVS*RRKCLL
Trigger: AAGCAAACATTTCCTTCTTCAGCTGACTGGCAATGG...GAAAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
3UTR-3UTR TCA 90 bp GCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTCTCCAATCAAGTTTGCTaGAAATACTGCAGCCTGAGT +
Preference number: 2 (lower is better)
Translates to: ALGSFGHLKASSIQKFLFSNQVC*KYCSLS
Trigger: ACTCAGGCTGCAGTATTTTCAGCAAACTTGATTGGA...GAAAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
3UTR-3UTR TCA 90 bp ATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTATGCTTTTCCAATCAAGTTTGCTaGAAATACTGCAGCCTGAGT +
Preference number: 2 (lower is better)
Translates to: IASVFTSQSSMLTIVLCFSNQVC*KYCSLS
Trigger: ACTCAGGCTGCAGTATTTTCAGCAAACTTGATTGGA...AAAGCATAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
3UTR-3UTR TCA 90 bp GAGCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTCATAGTGTTAAACACTaGCAGCATCAGTACCTGTTC +
Preference number: 2 (lower is better)
Translates to: ELWAALGILRHQVYRNFFHSVKH*QHQYLF
Trigger: GAACAGGTACTGATGCTGTCAGTGTTTAACACTATG...AAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
3UTR-3UTR CCA 90 bp CTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTTGCTTCACTTTGTATGTTTTGTaGAGGGTGCACAATTTCTTC +
Preference number: 2 (lower is better)
Translates to: LLQLKGHCQSAEEGNVCFTLYVL*RVHNFF
Trigger: GAAGAAATTGTGCACCCTCCACAAAACATACAAAGT...GAAGCAAACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
3UTR-3UTR TCA 90 bp ACACAGCTAAACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCCAAACACTTCTTTTCTaGGGATGTTCTAACTGCTGG +
Preference number: 2 (lower is better)
Translates to: TQLNIVLNTDSISTCSNCQTLLF*GCSNCW
Trigger: CCAGCAGTTAGAACATCCTCAGAAAAGAAGTGTTTG...GCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTTTAGCTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358397.9
ENST00000433389.8
3UTR-3UTR TCA 90 bp ACACAGCTAAACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCCTTAGGAAACACCTATaGTGCCACTTTAACTGGAAG +
Preference number: 2 (lower is better)
Translates to: TQLNIVLNTDSISTCSNCLRKHL*CHFNWK
Trigger: CTTCCAGTTAAAGTGGCATCATAGGTGTTTCCTAAG...GCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTTTAGCTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
3UTR-3UTR GCA 90 bp GAGCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTAAATCTGCACGGCATTaGATTCAAGCAAAGGACAAT +
Preference number: 2 (lower is better)
Translates to: ELWAALGILRHQVYRNFFKSARH*IQAKDN
Trigger: ATTGTCCTTTGCTTGAATGCAATGCCGTGCAGATTT...AAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
3UTR-3UTR GCA 90 bp GCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTCAAATCTGCACGGCATTaGATTCAAGCAAAGGACAAT +
Preference number: 2 (lower is better)
Translates to: ALGSFGHLKASSIQKFLFKSARH*IQAKDN
Trigger: ATTGTCCTTTGCTTGAATGCAATGCCGTGCAGATTT...GAAAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
3UTR-3UTR TCA 90 bp AACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTCAAACACTTCTTTTCTaGGGATGTTCTAACTGCTGG +
Preference number: 2 (lower is better)
Translates to: NIVLNTDSISTCSNCISVQTLLF*GCSNCW
Trigger: CCAGCAGTTAGAACATCCTCAGAAAAGAAGTGTTTG...AACACTGATGCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358397.9
ENST00000433389.8
3UTR-3UTR GCA 90 bp GCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTCAGTACCTGTTCTAATTaGATCAGTGTTTACCTCTCA +
Preference number: 2 (lower is better)
Translates to: ALGSFGHLKASSIQKFLFSTCSN*ISVYLS
Trigger: TGAGAGGTAAACACTGATGCAATTAGAACAGGTACT...GAAAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
3UTR-3UTR CCA 90 bp ATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTATGCTTTAAGTTTTCTTGTGTCTaGAGGTTTCAAGATCACCAT +
Preference number: 2 (lower is better)
Translates to: IASVFTSQSSMLTIVLCFKFSCV*RFQDHH
Trigger: ATGGTGATCTTGAAACCTCCAGACACAAGAAAACTT...AAAGCATAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
3UTR-3UTR TCA 90 bp CAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGATCCAATCAAGTTTGCTaGAAATACTGCAGCCTGAGT +
Preference number: 2 (lower is better)
Translates to: QLVYCFLEYTVQIVSLLGSNQVC*KYCSLS
Trigger: ACTCAGGCTGCAGTATTTTCAGCAAACTTGATTGGA...TCCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
3UTR-3UTR TCA 90 bp TCAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGCTTAGGAAACACCTATaGTGCCACTTTAACTGGAAG +
Preference number: 2 (lower is better)
Translates to: SVSVLFSRIHCSNCLTSGLRKHL*CHFNWK
Trigger: CTTCCAGTTAAAGTGGCATCATAGGTGTTTCCTAAG...CCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
3UTR-3UTR GCA 90 bp GCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTCCTAACTACATGTAGCTaGTTCATTTTTCGTTTTGCA +
Preference number: 2 (lower is better)
Translates to: ALGSFGHLKASSIQKFLFLTTCS*FIFRFA
Trigger: TGCAAAACGAAAAATGAAGCAGCTACATGTAGTTAG...GAAAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
3UTR-3UTR GCA 90 bp GAGCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTCTAACTACATGTAGCTaGTTCATTTTTCGTTTTGCA +
Preference number: 2 (lower is better)
Translates to: ELWAALGILRHQVYRNFFLTTCS*FIFRFA
Trigger: TGCAAAACGAAAAATGAAGCAGCTACATGTAGTTAG...AAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
3UTR-3UTR GCA 90 bp ATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTATGCTTTCTAACTACATGTAGCTaGTTCATTTTTCGTTTTGCA +
Preference number: 2 (lower is better)
Translates to: IASVFTSQSSMLTIVLCFLTTCS*FIFRFA
Trigger: TGCAAAACGAAAAATGAAGCAGCTACATGTAGTTAG...AAAGCATAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
3UTR-3UTR CCA 90 bp ACACAGCTAAACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCAAGTTTTCTTGTGTCTaGAGGTTTCAAGATCACCAT +
Preference number: 2 (lower is better)
Translates to: TQLNIVLNTDSISTCSNCKFSCV*RFQDHH
Trigger: ATGGTGATCTTGAAACCTCCAGACACAAGAAAACTT...GCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTTTAGCTGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
3UTR-3UTR GCA 90 bp ACACAGCTAAACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCCTAACTACATGTAGCTaGTTCATTTTTCGTTTTGCA +
Preference number: 2 (lower is better)
Translates to: TQLNIVLNTDSISTCSNCLTTCS*FIFRFA
Trigger: TGCAAAACGAAAAATGAAGCAGCTACATGTAGTTAG...GCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTTTAGCTGTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
3UTR-3UTR CCA 90 bp AACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTAAGTTTTCTTGTGTCTaGAGGTTTCAAGATCACCAT +
Preference number: 2 (lower is better)
Translates to: NIVLNTDSISTCSNCISVKFSCV*RFQDHH
Trigger: ATGGTGATCTTGAAACCTCCAGACACAAGAAAACTT...AACACTGATGCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
3UTR-3UTR CCA 90 bp AACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTACTTTGTATGTTTTGTaGAGGGTGCACAATTTCTTC +
Preference number: 2 (lower is better)
Translates to: NIVLNTDSISTCSNCISVTLYVL*RVHNFF
Trigger: GAAGAAATTGTGCACCCTCCACAAAACATACAAAGT...AACACTGATGCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
3UTR-3UTR GCA 90 bp CAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGACTAACTACATGTAGCTaGTTCATTTTTCGTTTTGCA +
Preference number: 2 (lower is better)
Translates to: QLVYCFLEYTVQIVSLLGLTTCS*FIFRFA
Trigger: TGCAAAACGAAAAATGAAGCAGCTACATGTAGTTAG...TCCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
3UTR GCA 72 bp TTCTCCGTTCCTTCGACCCTGAGCATTCAGACAAAGTaGTGCACCTCCCTTGGCAATATTGAGTCCTTTGAA +
Preference number: 3 (lower is better)
Translates to: FSVPSTLSIQTK*CTSLGNIESFE
Trigger: TTCAAAGGACTCAATATTGCCAAGGGAGGTGCAGCACTTTGTCTGAATGCTCAGGGTCGAAGGAACGGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522756.6
3UTR-3UTR CAA 90 bp AGCTTCTCCGTTCCTTCGACCCTGAGCATTCAGACAAAGTGCTGCACCTCCCTTTCAATAAGTTCCATCTaGCTGCAAGTTCCACTTTCA +
Preference number: 3 (lower is better)
Translates to: SFSVPSTLSIQTKCCTSLSISSI*LQVPLS
Trigger: TGAAAGTGGAACTTGCAGCAAGATGGAACTTATTGA...AAGGGAGGTGCAGCACTTTGTCTGAATGCTCAGGGTCGAAGGAACGGAGAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522756.6
3UTR TCA 72 bp CTTCCTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTaGAGAAGGAAATGTTTGCTTCTCCCTTTAAGGTGT +
Preference number: 3 (lower is better)
Translates to: LPIAVKGPLPVS*RRKCLLLPLRC
Trigger: ACACCTTAAAGGGAGAAGCAAACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
3UTR-3UTR CAA 90 bp CTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTTGCTTCTTGCTAGAAGTTTTCTaGTGTCTGGAGGTTTCAAGA +
Preference number: 3 (lower is better)
Translates to: LLQLKGHCQSAEEGNVCFLLEVF*CLEVSR
Trigger: TCTTGAAACCTCCAGACACAAGAAAACTTCTAGCAA...GAAGCAAACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
3UTR-3UTR CAA 90 bp CTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTTGCTTCGCTGTAAGTTACGATTaGGCTTCACTAGCTCAAATT +
Preference number: 3 (lower is better)
Translates to: LLQLKGHCQSAEEGNVCFAVSYD*ASLAQI
Trigger: AATTTGAGCTAGTGAAGCCAAATCGTAACTTACAGC...GAAGCAAACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
3UTR-3UTR CAA 90 bp TTCTTCCTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTTTGCTAGAAGTTTTCTaGTGTCTGGAGGTTTCAAGA +
Preference number: 3 (lower is better)
Translates to: FFLLQLKGHCQSAEEGNVLLEVF*CLEVSR
Trigger: TCTTGAAACCTCCAGACACAAGAAAACTTCTAGCAA...AACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAGGAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
3UTR-3UTR CAA 90 bp CTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTTGCTTCAAACTTCCCCTGAATTaGCTAGAAGTTTTCTTGTGT +
Preference number: 3 (lower is better)
Translates to: LLQLKGHCQSAEEGNVCFKLPLN*LEVFLC
Trigger: ACACAAGAAAACTTCTAGCAAATTCAGGGGAAGTTT...GAAGCAAACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
3UTR-3UTR CAA 90 bp TTCTTCCTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTGCTGTAAGTTACGATTaGGCTTCACTAGCTCAAATT +
Preference number: 3 (lower is better)
Translates to: FFLLQLKGHCQSAEEGNVAVSYD*ASLAQI
Trigger: AATTTGAGCTAGTGAAGCCAAATCGTAACTTACAGC...AACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAGGAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
3UTR-3UTR CAA 90 bp ACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGGCTGTAAGTTACGATTaGGCTTCACTAGCTCAAATT +
Preference number: 3 (lower is better)
Translates to: TASVPVLIASVFTSQSSMAVSYD*ASLAQI
Trigger: AATTTGAGCTAGTGAAGCCAAATCGTAACTTACAGC...CATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAACAGGTACTGATGCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
3UTR-3UTR CAA 90 bp GAGCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTTGCTAGAAGTTTTCTaGTGTCTGGAGGTTTCAAGA +
Preference number: 3 (lower is better)
Translates to: ELWAALGILRHQVYRNFFLLEVF*CLEVSR
Trigger: TCTTGAAACCTCCAGACACAAGAAAACTTCTAGCAA...AAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
3UTR-3UTR CAA 90 bp ACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGAAACTTCCCCTGAATTaGCTAGAAGTTTTCTTGTGT +
Preference number: 3 (lower is better)
Translates to: TASVPVLIASVFTSQSSMKLPLN*LEVFLC
Trigger: ACACAAGAAAACTTCTAGCAAATTCAGGGGAAGTTT...CATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAACAGGTACTGATGCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
3UTR-3UTR CAA 90 bp GCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTCGCTGTAAGTTACGATTaGGCTTCACTAGCTCAAATT +
Preference number: 3 (lower is better)
Translates to: ALGSFGHLKASSIQKFLFAVSYD*ASLAQI
Trigger: AATTTGAGCTAGTGAAGCCAAATCGTAACTTACAGC...GAAAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
3UTR-3UTR CAA 90 bp AACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTTGCTAGAAGTTTTCTaGTGTCTGGAGGTTTCAAGA +
Preference number: 3 (lower is better)
Translates to: NIVLNTDSISTCSNCISVLLEVF*CLEVSR
Trigger: TCTTGAAACCTCCAGACACAAGAAAACTTCTAGCAA...AACACTGATGCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
3UTR-3UTR CAA 90 bp CAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGATTGCTAGAAGTTTTCTaGTGTCTGGAGGTTTCAAGA +
Preference number: 3 (lower is better)
Translates to: QLVYCFLEYTVQIVSLLGLLEVF*CLEVSR
Trigger: TCTTGAAACCTCCAGACACAAGAAAACTTCTAGCAA...TCCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
3UTR-3UTR CAA 90 bp AACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTAAACTTCCCCTGAATTaGCTAGAAGTTTTCTTGTGT +
Preference number: 3 (lower is better)
Translates to: NIVLNTDSISTCSNCISVKLPLN*LEVFLC
Trigger: ACACAAGAAAACTTCTAGCAAATTCAGGGGAAGTTT...AACACTGATGCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
3UTR-3UTR CAA 90 bp TCAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGAAACTTCCCCTGAATTaGCTAGAAGTTTTCTTGTGT +
Preference number: 3 (lower is better)
Translates to: SVSVLFSRIHCSNCLTSGKLPLN*LEVFLC
Trigger: ACACAAGAAAACTTCTAGCAAATTCAGGGGAAGTTT...CCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
3UTR-3UTR CAA 90 bp CAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGAAAACTTCCCCTGAATTaGCTAGAAGTTTTCTTGTGT +
Preference number: 3 (lower is better)
Translates to: QLVYCFLEYTVQIVSLLGKLPLN*LEVFLC
Trigger: ACACAAGAAAACTTCTAGCAAATTCAGGGGAAGTTT...TCCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp CTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTTGCTTCCTTCAGCTGTGGCCGTaGAAGGGAGCCCCCGCATGC +
Preference number: 4 (lower is better)
Translates to: LLQLKGHCQSAEEGNVCFLQLWP*KGAPAC
Trigger: GCATGCGGGGGCTCCCTTTCACGGCCACAGCTGAAG...GAAGCAAACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR TCA 90 bp TTCTTCCTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTCCAGGCCCTGCATTCTaGCCACCGTGCCAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: FFLLQLKGHCQSAEEGNVPGPAF*PPCQAV
Trigger: CACAGCCTGGCACGGTGGTCAGAATGCAGGGCCTGG...AACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAGGAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
CDS-3UTR TCA 90 bp GCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTCCTTCAGCTGTGGCCGTaGAAGGGAGCCCCCGCATGC +
Preference number: 4 (lower is better)
Translates to: ALGSFGHLKASSIQKFLFLQLWP*KGAPAC
Trigger: GCATGCGGGGGCTCCCTTTCACGGCCACAGCTGAAG...GAAAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR TCA 90 bp ATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTATGCTTTCTTCAGCTGTGGCCGTaGAAGGGAGCCCCCGCATGC +
Preference number: 4 (lower is better)
Translates to: IASVFTSQSSMLTIVLCFLQLWP*KGAPAC
Trigger: GCATGCGGGGGCTCCCTTTCACGGCCACAGCTGAAG...AAAGCATAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp ATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTATGCTTTCCAGGCCCTGCATTCTaGCCACCGTGCCAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: IASVFTSQSSMLTIVLCFPGPAF*PPCQAV
Trigger: CACAGCCTGGCACGGTGGTCAGAATGCAGGGCCTGG...AAAGCATAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
CDS-3UTR TCA 90 bp TCTGAAGACTGCCATGGTAAACCTCGTGCCCTGACTACGGTGTTATCATCAATAGGATCTGAAAACCTGTaGTCTGGGCGGCTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: SEDCHGKPRALTTVLSSIGSENL*SGRLRQ
Trigger: CTGCCTCAGCCGCCCAGATCACAGGTTTTCAGATCC...TATTGATGATAACACCGTAGTCAGGGCACGAGGTTTACCATGGCAGTCTTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522756.6
CDS-3UTR CCA 90 bp ACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGAACTGTCGGAGGGCTTaGTCCAGCTGCGACGCCGAG +
Preference number: 4 (lower is better)
Translates to: TASVPVLIASVFTSQSSMNCRRA*SSCDAE
Trigger: CTCGGCGTCGCAGCTGGACCAAGCCCTCCGACAGTT...CATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAACAGGTACTGATGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000646773.1
CDS-3UTR CCA 90 bp CTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTTGCTTCGGGAGGGGTTGGAAGTaGAATGAGAGGGGCCGAGGA +
Preference number: 4 (lower is better)
Translates to: LLQLKGHCQSAEEGNVCFGRGWK*NERGRG
Trigger: TCCTCGGCCCCTCTCATTCCACTTCCAACCCCTCCC...GAAGCAAACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CCA 90 bp GCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTCACCCAAGCCCACACCTaGTCGGTGCTCCACGCCCAG +
Preference number: 4 (lower is better)
Translates to: ALGSFGHLKASSIQKFLFTQAHT*SVLHAQ
Trigger: CTGGGCGTGGAGCACCGACCAGGTGTGGGCTTGGGT...GAAAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423620.6
CDS-3UTR TCA 90 bp ACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCGGTGGCCCCAGCAGTaGTCCCAAAAAGCACCACCA +
Preference number: 4 (lower is better)
Translates to: TASVPVLIASVFTSQSSMRWPQQ*SQKAPP
Trigger: TGGTGGTGCTTTTTGGGATCACTGCTGGGGCCACCG...CATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAACAGGTACTGATGCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000646773.1
CDS-3UTR TCA 90 bp TCGACCCTGAGCATTCAGACAAAGTGCTGCACCTCCCTTGGCAATATTGAGTCCGTAAACCTCGTGCCCTaGCTACGGTGTTATCATCAA +
Preference number: 4 (lower is better)
Translates to: STLSIQTKCCTSLGNIESVNLVP*LRCYHQ
Trigger: TTGATGATAACACCGTAGTCAGGGCACGAGGTTTAC...GGACTCAATATTGCCAAGGGAGGTGCAGCACTTTGTCTGAATGCTCAGGGTCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522756.6
CDS-3UTR TCA 90 bp ACACAGCTAAACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCCTTCAGCTGTGGCCGTaGAAGGGAGCCCCCGCATGC +
Preference number: 4 (lower is better)
Translates to: TQLNIVLNTDSISTCSNCLQLWP*KGAPAC
Trigger: GCATGCGGGGGCTCCCTTTCACGGCCACAGCTGAAG...GCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTTTAGCTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp CTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTTGCTTCGGGTTGGAAGTGGAATaGGAGGGGCCGAGGAGAATC +
Preference number: 4 (lower is better)
Translates to: LLQLKGHCQSAEEGNVCFGLEVE*EGPRRI
Trigger: GATTCTCCTCGGCCCCTCTCATTCCACTTCCAACCC...GAAGCAAACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR TCA 90 bp ACACAGCTAAACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCCCAGGCCCTGCATTCTaGCCACCGTGCCAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: TQLNIVLNTDSISTCSNCPGPAF*PPCQAV
Trigger: CACAGCCTGGCACGGTGGTCAGAATGCAGGGCCTGG...GCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTTTAGCTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
CDS-3UTR GCA 90 bp GAGCTTCTCCGTTCCTTCGACCCTGAGCATTCAGACAAAGTGCTGCACCTCCCTATTCAGACAAAGTGCTaGACCTCCCTTGGCAATATT +
Preference number: 4 (lower is better)
Translates to: ELLRSFDPEHSDKVLHLPIQTKC*TSLGNI
Trigger: AATATTGCCAAGGGAGGTGCAGCACTTTGTCTGAAT...AGGGAGGTGCAGCACTTTGTCTGAATGCTCAGGGTCGAAGGAACGGAGAAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522756.6
CDS-3UTR CCA 90 bp GTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTAAACTGTCGGAGGGCTTaGTCCAGCTGCGACGCCGAG +
Preference number: 4 (lower is better)
Translates to: VLIASVFTSQSSMLTIVLNCRRA*SSCDAE
Trigger: CTCGGCGTCGCAGCTGGACCAAGCCCTCCGACAGTT...TAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000646773.1
CDS-3UTR CCA 90 bp GAGCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTAACTGTCGGAGGGCTTaGTCCAGCTGCGACGCCGAG +
Preference number: 4 (lower is better)
Translates to: ELWAALGILRHQVYRNFFNCRRA*SSCDAE
Trigger: CTCGGCGTCGCAGCTGGACCAAGCCCTCCGACAGTT...AAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
CDS-3UTR CCA 90 bp ACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGGGTAGTACGCTGTaGAGGGCTGCAGTGCTCGTG +
Preference number: 4 (lower is better)
Translates to: TASVPVLIASVFTSQSSMLGSTL*RAAVLV
Trigger: CACGAGCACTGCAGCCCTCCACAGCGTACTACCCAG...CATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAACAGGTACTGATGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CCA 90 bp CTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTTGCTTCCACCGTGCCAGGCTGTaGAGGGACACCGCTAAGATT +
Preference number: 4 (lower is better)
Translates to: LLQLKGHCQSAEEGNVCFHRARL*RDTAKI
Trigger: AATCTTAGCGGTGTCCCTCCACAGCCTGGCACGGTG...GAAGCAAACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
CDS-3UTR TCA 90 bp GAGCTTCTCCGTTCCTTCGACCCTGAGCATTCAGACAAAGTGCTGCACCTCCCTTTTGTCAATATCAGGTaGACCAGGGCAACATTTCTT +
Preference number: 4 (lower is better)
Translates to: ELLRSFDPEHSDKVLHLPFVNIR*TRATFL
Trigger: AAGAAATGTTGCCCTGGTTCACCTGATATTGACAAA...AGGGAGGTGCAGCACTTTGTCTGAATGCTCAGGGTCGAAGGAACGGAGAAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522756.6
CDS-3UTR TCA 90 bp GAGCTTCTCCGTTCCTTCGACCCTGAGCATTCAGACAAAGTGCTGCACCTCCCTAATCTTGCAATATCTTaGTCTGAAGACTGCCATGGT +
Preference number: 4 (lower is better)
Translates to: ELLRSFDPEHSDKVLHLPNLAIS*SEDCHG
Trigger: ACCATGGCAGTCTTCAGATCAAGATATTGCAAGATT...AGGGAGGTGCAGCACTTTGTCTGAATGCTCAGGGTCGAAGGAACGGAGAAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522756.6
CDS-3UTR TCA 90 bp CGTGCCCTGACTACGGTGTTATCATCAATAAGTTCCATCTTGCTGCAAGTTCCATACCGGGTCCCCATGTaGTGTTTGTGCCTCTGTAGT +
Preference number: 4 (lower is better)
Translates to: RALTTVLSSISSILLQVPYRVPM*CLCLCS
Trigger: ACTACAGAGGCACAAACATCACATGGGGACCCGGTA...TGGAACTTGCAGCAAGATGGAACTTATTGATGATAACACCGTAGTCAGGGCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522756.6
CDS-3UTR TCA 90 bp CTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTTGCTTCCGATTCAGCACCTGCTaGACTTCAGCTGCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: LLQLKGHCQSAEEGNVCFRFSTC*TSAAVL
Trigger: GAGCACAGCAGCTGAAGTTCAGCAGGTGCTGAATCG...GAAGCAAACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR TCA 90 bp CTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTTGCTTCGATAAAGGCATCTCCTaGTGGGCGGCCCTGGTGATT +
Preference number: 4 (lower is better)
Translates to: LLQLKGHCQSAEEGNVCFDKGIS*WAALVI
Trigger: AATCACCAGGGCCGCCCATCAGGAGATGCCTTTATC...GAAGCAAACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR TCA 90 bp TGCCCTGACTACGGTGTTATCATCAATAAGTTCCATCTTGCTGCAAGTTCCACTAGGCGAAGGTTGCAGTaGGCCGAGATCACGCCATTT +
Preference number: 4 (lower is better)
Translates to: CPDYGVIINKFHLAASSTRRRLQ*AEITPF
Trigger: AAATGGCGTGATCTCGGCTCACTGCAACCTTCGCCT...AGTGGAACTTGCAGCAAGATGGAACTTATTGATGATAACACCGTAGTCAGGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522756.6
CDS-3UTR GCA 90 bp TCAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGCCCACACCTGGTCGGTaGTCCACGCCCAGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: SVSVLFSRIHCSNCLTSGPTPGR*STPRAG
Trigger: TCCTGCCCTGGGCGTGGAGCACCGACCAGGTGTGGG...CCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423620.6
CDS-3UTR CCA 90 bp GAGCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTCTGGGTAGTACGCTGTaGAGGGCTGCAGTGCTCGTG +
Preference number: 4 (lower is better)
Translates to: ELWAALGILRHQVYRNFFLGSTL*RAAVLV
Trigger: CACGAGCACTGCAGCCCTCCACAGCGTACTACCCAG...AAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CCA 90 bp GCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTCGAGCTGAGTGCCTGCTaGGTAGTACGCTGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: ALGSFGHLKASSIQKFLFELSAC*VVRCGG
Trigger: CCCTCCACAGCGTACTACCCAGCAGGCACTCAGCTC...GAAAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CCA 90 bp ATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTATGCTTTGAGCTGAGTGCCTGCTaGGTAGTACGCTGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: IASVFTSQSSMLTIVLCFELSAC*VVRCGG
Trigger: CCCTCCACAGCGTACTACCCAGCAGGCACTCAGCTC...AAAGCATAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CCA 90 bp ACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCACCGTGCCAGGCTGTaGAGGGACACCGCTAAGATT +
Preference number: 4 (lower is better)
Translates to: TASVPVLIASVFTSQSSMHRARL*RDTAKI
Trigger: AATCTTAGCGGTGTCCCTCCACAGCCTGGCACGGTG...CATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAACAGGTACTGATGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
CDS-3UTR TCA 90 bp TGCCCTGACTACGGTGTTATCATCAATAAGTTCCATCTTGCTGCAAGTTCCACTCCGTTCCTTCGACCCTaGGCATTCAGACAAAGTGCT +
Preference number: 4 (lower is better)
Translates to: CPDYGVIINKFHLAASSTPFLRP*AFRQSA
Trigger: AGCACTTTGTCTGAATGCTCAGGGTCGAAGGAACGG...AGTGGAACTTGCAGCAAGATGGAACTTATTGATGATAACACCGTAGTCAGGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522756.6
CDS-3UTR TCA 90 bp CTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTTGCTTCTACCGGGTCCCCATGTaGTGTTTGTGCCTCTGTAGT +
Preference number: 4 (lower is better)
Translates to: LLQLKGHCQSAEEGNVCFYRVPM*CLCLCS
Trigger: ACTACAGAGGCACAAACATCACATGGGGACCCGGTA...GAAGCAAACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR TCA 90 bp CAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGACTTCAGCTGTGGCCGTaGAAGGGAGCCCCCGCATGC +
Preference number: 4 (lower is better)
Translates to: QLVYCFLEYTVQIVSLLGLQLWP*KGAPAC
Trigger: GCATGCGGGGGCTCCCTTTCACGGCCACAGCTGAAG...TCCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp GCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTCGGGTTGGAAGTGGAATaGGAGGGGCCGAGGAGAATC +
Preference number: 4 (lower is better)
Translates to: ALGSFGHLKASSIQKFLFGLEVE*EGPRRI
Trigger: GATTCTCCTCGGCCCCTCTCATTCCACTTCCAACCC...GAAAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR TCA 90 bp GTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTAGGGTTGGAAGTGGAATaGGAGGGGCCGAGGAGAATC +
Preference number: 4 (lower is better)
Translates to: VLIASVFTSQSSMLTIVLGLEVE*EGPRRI
Trigger: GATTCTCCTCGGCCCCTCTCATTCCACTTCCAACCC...TAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp ACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGGATAAAGGCATCTCCTaGTGGGCGGCCCTGGTGATT +
Preference number: 4 (lower is better)
Translates to: TASVPVLIASVFTSQSSMDKGIS*WAALVI
Trigger: AATCACCAGGGCCGCCCATCAGGAGATGCCTTTATC...CATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAACAGGTACTGATGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp GCCCTGACTACGGTGTTATCATCAATAAGTTCCATCTTGCTGCAAGTTCCACTTCACTCTCTCTGGATCTaGAAACCTGTGATCTGGGCG +
Preference number: 4 (lower is better)
Translates to: ALTTVLSSISSILLQVPLHSLWI*KPVIWA
Trigger: CGCCCAGATCACAGGTTTTCAGATCCAGAGAGAGTG...AAGTGGAACTTGCAGCAAGATGGAACTTATTGATGATAACACCGTAGTCAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522756.6
CDS-3UTR GCA 90 bp AACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTAGGGCTTGGTCCAGCTaGGACGCCGAGGACAGGCTT +
Preference number: 4 (lower is better)
Translates to: NIVLNTDSISTCSNCISVRAWSS*DAEDRL
Trigger: AAGCCTGTCCTCGGCGTCGCAGCTGGACCAAGCCCT...AACACTGATGCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000646773.1
CDS-3UTR GCA 90 bp ACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGGAAGAGCTGAGTGCCTaGTGGGTAGTACGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: TASVPVLIASVFTSQSSMEELSA*WVVRCG
Trigger: TCCACAGCGTACTACCCAGCAGGCACTCAGCTCTTC...CATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAACAGGTACTGATGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CCA 90 bp TTCTTCCTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTCGGGAGGCGGTAAGGTaGTGTGGAAGTGAGAACGAA +
Preference number: 4 (lower is better)
Translates to: FFLLQLKGHCQSAEEGNVREAVR*CGSENE
Trigger: TTCGTTCTCACTTCCACACCACCTTACCGCCTCCCG...AACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAGGAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
CDS-3UTR CCA 90 bp CTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTTGCTTCGTCCCACCTTCTTGTTaGCCAGATCCACGACTTTCC +
Preference number: 4 (lower is better)
Translates to: LLQLKGHCQSAEEGNVCFVPPSC*PDPRLS
Trigger: GGAAAGTCGTGGATCTGGCCAACAAGAAGGTGGGAC...GAAGCAAACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
CDS-3UTR CCA 90 bp AACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTAACTGTCGGAGGGCTTaGTCCAGCTGCGACGCCGAG +
Preference number: 4 (lower is better)
Translates to: NIVLNTDSISTCSNCISVNCRRA*SSCDAE
Trigger: CTCGGCGTCGCAGCTGGACCAAGCCCTCCGACAGTT...AACACTGATGCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000646773.1
CDS-3UTR CCA 90 bp CTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTTGCTTCAAAAGCGTCCCCTGTTaGCCTACCATCTGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: LLQLKGHCQSAEEGNVCFKSVPC*PTIWVG
Trigger: ACCTACCCAGATGGTAGGCCAACAGGGGACGCTTTT...GAAGCAAACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CCA 90 bp CTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTTGCTTCGGGCTGCAGTGCTCGTaGATTCAAAATCACAGAGGG +
Preference number: 4 (lower is better)
Translates to: LLQLKGHCQSAEEGNVCFGLQCS*IQNHRG
Trigger: CCCTCTGTGATTTTGAATCCACGAGCACTGCAGCCC...GAAGCAAACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CCA 90 bp ACACAGCTAAACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCCTGGGTAGTACGCTGTaGAGGGCTGCAGTGCTCGTG +
Preference number: 4 (lower is better)
Translates to: TQLNIVLNTDSISTCSNCLGSTL*RAAVLV
Trigger: CACGAGCACTGCAGCCCTCCACAGCGTACTACCCAG...GCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTTTAGCTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CCA 90 bp ACACAGCTAAACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCGAGCTGAGTGCCTGCTaGGTAGTACGCTGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: TQLNIVLNTDSISTCSNCELSAC*VVRCGG
Trigger: CCCTCCACAGCGTACTACCCAGCAGGCACTCAGCTC...GCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTTTAGCTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CCA 90 bp ACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGACTATTAGGCGAACCTaGGGGGCTGGGATAGTACGC +
Preference number: 4 (lower is better)
Translates to: TASVPVLIASVFTSQSSMTIRRT*GAGIVR
Trigger: GCGTACTATCCCAGCCCCCCAGGTTCGCCTAATAGT...CATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAACAGGTACTGATGCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
CDS-3UTR CCA 90 bp TGCCCTGACTACGGTGTTATCATCAATAAGTTCCATCTTGCTGCAAGTTCCACTCATTTCACTCCAGCCTaGGTAACAGAGGGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: CPDYGVIINKFHLAASSTHFTPA*VTEGGS
Trigger: AGAGCCTCCCTCTGTTACCCAGGCTGGAGTGAAATG...AGTGGAACTTGCAGCAAGATGGAACTTATTGATGATAACACCGTAGTCAGGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522756.6
CDS-3UTR TCA 90 bp AACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTCGGTGGCCCCAGCAGTaGTCCCAAAAAGCACCACCA +
Preference number: 4 (lower is better)
Translates to: NIVLNTDSISTCSNCISVRWPQQ*SQKAPP
Trigger: TGGTGGTGCTTTTTGGGATCACTGCTGGGGCCACCG...AACACTGATGCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000646773.1
CDS-3UTR TCA 90 bp ACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGGATGCAGGATTTGCCTaGCATGAAGCTGCCCATCAG +
Preference number: 4 (lower is better)
Translates to: TASVPVLIASVFTSQSSMDAGFA*HEAAHQ
Trigger: CTGATGGGCAGCTTCATGTCAGGCAAATCCTGCATC...CATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAACAGGTACTGATGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000646773.1
CDS-3UTR TCA 90 bp ACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCCGTTCCTTCGACCCTaGGCATTCAGACAAAGTGCT +
Preference number: 4 (lower is better)
Translates to: TASVPVLIASVFTSQSSMPFLRP*AFRQSA
Trigger: AGCACTTTGTCTGAATGCTCAGGGTCGAAGGAACGG...CATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAACAGGTACTGATGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp ACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGTACCGGGTCCCCATGTaGTGTTTGTGCCTCTGTAGT +
Preference number: 4 (lower is better)
Translates to: TASVPVLIASVFTSQSSMYRVPM*CLCLCS
Trigger: ACTACAGAGGCACAAACATCACATGGGGACCCGGTA...CATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAACAGGTACTGATGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp GAGCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTCGATTCAGCACCTGCTaGACTTCAGCTGCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: ELWAALGILRHQVYRNFFRFSTC*TSAAVL
Trigger: GAGCACAGCAGCTGAAGTTCAGCAGGTGCTGAATCG...AAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR TCA 90 bp GCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTCCGATTCAGCACCTGCTaGACTTCAGCTGCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: ALGSFGHLKASSIQKFLFRFSTC*TSAAVL
Trigger: GAGCACAGCAGCTGAAGTTCAGCAGGTGCTGAATCG...GAAAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR TCA 90 bp ACACAGCTAAACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCGGGTTGGAAGTGGAATaGGAGGGGCCGAGGAGAATC +
Preference number: 4 (lower is better)
Translates to: TQLNIVLNTDSISTCSNCGLEVE*EGPRRI
Trigger: GATTCTCCTCGGCCCCTCTCATTCCACTTCCAACCC...GCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTTTAGCTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp GAGCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTGATAAAGGCATCTCCTaGTGGGCGGCCCTGGTGATT +
Preference number: 4 (lower is better)
Translates to: ELWAALGILRHQVYRNFFDKGIS*WAALVI
Trigger: AATCACCAGGGCCGCCCATCAGGAGATGCCTTTATC...AAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR TCA 90 bp ATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTATGCTTTGATAAAGGCATCTCCTaGTGGGCGGCCCTGGTGATT +
Preference number: 4 (lower is better)
Translates to: IASVFTSQSSMLTIVLCFDKGIS*WAALVI
Trigger: AATCACCAGGGCCGCCCATCAGGAGATGCCTTTATC...AAAGCATAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp TTCTTCCTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTTACGCTGTGGAGGGCTaGAGTGCTCGTGGATTCAAA +
Preference number: 4 (lower is better)
Translates to: FFLLQLKGHCQSAEEGNVYAVEG*SARGFK
Trigger: TTTGAATCCACGAGCACTGCAGCCCTCCACAGCGTA...AACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAGGAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR GCA 90 bp GTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTAGAAGAGCTGAGTGCCTaGTGGGTAGTACGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: VLIASVFTSQSSMLTIVLEELSA*WVVRCG
Trigger: TCCACAGCGTACTACCCAGCAGGCACTCAGCTCTTC...TAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp GAGCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTGAAGAGCTGAGTGCCTaGTGGGTAGTACGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: ELWAALGILRHQVYRNFFEELSA*WVVRCG
Trigger: TCCACAGCGTACTACCCAGCAGGCACTCAGCTCTTC...AAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CCA 90 bp GCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTCCGGGAGGCGGTAAGGTaGTGTGGAAGTGAGAACGAA +
Preference number: 4 (lower is better)
Translates to: ALGSFGHLKASSIQKFLFREAVR*CGSENE
Trigger: TTCGTTCTCACTTCCACACCACCTTACCGCCTCCCG...GAAAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
CDS-3UTR CCA 90 bp GTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTACGGGAGGCGGTAAGGTaGTGTGGAAGTGAGAACGAA +
Preference number: 4 (lower is better)
Translates to: VLIASVFTSQSSMLTIVLREAVR*CGSENE
Trigger: TTCGTTCTCACTTCCACACCACCTTACCGCCTCCCG...TAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000646773.1
CDS-3UTR CCA 90 bp TTCTTCCTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTGTCCCACCTTCTTGTTaGCCAGATCCACGACTTTCC +
Preference number: 4 (lower is better)
Translates to: FFLLQLKGHCQSAEEGNVVPPSC*PDPRLS
Trigger: GGAAAGTCGTGGATCTGGCCAACAAGAAGGTGGGAC...AACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAGGAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
CDS-3UTR CCA 90 bp ACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGAAAAGCGTCCCCTGTTaGCCTACCATCTGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: TASVPVLIASVFTSQSSMKSVPC*PTIWVG
Trigger: ACCTACCCAGATGGTAGGCCAACAGGGGACGCTTTT...CATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAACAGGTACTGATGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CCA 90 bp TTCTTCCTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTAAAAGCGTCCCCTGTTaGCCTACCATCTGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: FFLLQLKGHCQSAEEGNVKSVPC*PTIWVG
Trigger: ACCTACCCAGATGGTAGGCCAACAGGGGACGCTTTT...AACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAGGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CCA 90 bp TTCTTCCTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTAACTGCAGCAGGAGCTaGAAATGTGTAGGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: FFLLQLKGHCQSAEEGNVNCSRS*KCVGGR
Trigger: CCTCCCTCCTACACATTTCCAGCTCCTGCTGCAGTT...AACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAGGAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CCA 90 bp ACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGAACTGCAGCAGGAGCTaGAAATGTGTAGGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: TASVPVLIASVFTSQSSMNCSRS*KCVGGR
Trigger: CCTCCCTCCTACACATTTCCAGCTCCTGCTGCAGTT...CATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAACAGGTACTGATGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CCA 90 bp TTCTTCCTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTGGGCTGCAGTGCTCGTaGATTCAAAATCACAGAGGG +
Preference number: 4 (lower is better)
Translates to: FFLLQLKGHCQSAEEGNVGLQCS*IQNHRG
Trigger: CCCTCTGTGATTTTGAATCCACGAGCACTGCAGCCC...AACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAGGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CCA 90 bp ACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGGGGCTGCAGTGCTCGTaGATTCAAAATCACAGAGGG +
Preference number: 4 (lower is better)
Translates to: TASVPVLIASVFTSQSSMGLQCS*IQNHRG
Trigger: CCCTCTGTGATTTTGAATCCACGAGCACTGCAGCCC...CATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAACAGGTACTGATGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CCA 90 bp AACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTGAGCTGAGTGCCTGCTaGGTAGTACGCTGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: NIVLNTDSISTCSNCISVELSAC*VVRCGG
Trigger: CCCTCCACAGCGTACTACCCAGCAGGCACTCAGCTC...AACACTGATGCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CCA 90 bp ATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTATGCTTTACTATTAGGCGAACCTaGGGGGCTGGGATAGTACGC +
Preference number: 4 (lower is better)
Translates to: IASVFTSQSSMLTIVLCFTIRRT*GAGIVR
Trigger: GCGTACTATCCCAGCCCCCCAGGTTCGCCTAATAGT...AAAGCATAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
CDS-3UTR TCA 90 bp CAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGACGGTGGCCCCAGCAGTaGTCCCAAAAAGCACCACCA +
Preference number: 4 (lower is better)
Translates to: QLVYCFLEYTVQIVSLLGRWPQQ*SQKAPP
Trigger: TGGTGGTGCTTTTTGGGATCACTGCTGGGGCCACCG...TCCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000646773.1
CDS-3UTR TCA 90 bp TCAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGCGGTGGCCCCAGCAGTaGTCCCAAAAAGCACCACCA +
Preference number: 4 (lower is better)
Translates to: SVSVLFSRIHCSNCLTSGRWPQQ*SQKAPP
Trigger: TGGTGGTGCTTTTTGGGATCACTGCTGGGGCCACCG...CCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000646773.1
CDS-3UTR TCA 90 bp TTCTTCCTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTAGGATTTGCCTGACATaGAGCTGCCCATCAGTACAG +
Preference number: 4 (lower is better)
Translates to: FFLLQLKGHCQSAEEGNVRICLT*SCPSVQ
Trigger: CTGTACTGATGGGCAGCTTCATGTCAGGCAAATCCT...AACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAGGAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
CDS-3UTR TCA 90 bp GAGCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTGATGCAGGATTTGCCTaGCATGAAGCTGCCCATCAG +
Preference number: 4 (lower is better)
Translates to: ELWAALGILRHQVYRNFFDAGFA*HEAAHQ
Trigger: CTGATGGGCAGCTTCATGTCAGGCAAATCCTGCATC...AAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
CDS-3UTR TCA 90 bp GTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTACCGTTCCTTCGACCCTaGGCATTCAGACAAAGTGCT +
Preference number: 4 (lower is better)
Translates to: VLIASVFTSQSSMLTIVLPFLRP*AFRQSA
Trigger: AGCACTTTGTCTGAATGCTCAGGGTCGAAGGAACGG...TAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp GTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTATACCGGGTCCCCATGTaGTGTTTGTGCCTCTGTAGT +
Preference number: 4 (lower is better)
Translates to: VLIASVFTSQSSMLTIVLYRVPM*CLCLCS
Trigger: ACTACAGAGGCACAAACATCACATGGGGACCCGGTA...TAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp ACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGTACCATCTGGGTAGGTaGCAAAGAGGATGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: TASVPVLIASVFTSQSSMYHLGR*QRGCLP
Trigger: AGGAAGGCATCCTCTTTGTCACCTACCCAGATGGTA...CATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAACAGGTACTGATGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp AACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTGGGTTGGAAGTGGAATaGGAGGGGCCGAGGAGAATC +
Preference number: 4 (lower is better)
Translates to: NIVLNTDSISTCSNCISVGLEVE*EGPRRI
Trigger: GATTCTCCTCGGCCCCTCTCATTCCACTTCCAACCC...AACACTGATGCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp ACACAGCTAAACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCGATAAAGGCATCTCCTaGTGGGCGGCCCTGGTGATT +
Preference number: 4 (lower is better)
Translates to: TQLNIVLNTDSISTCSNCDKGIS*WAALVI
Trigger: AATCACCAGGGCCGCCCATCAGGAGATGCCTTTATC...GCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTTTAGCTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp TTCTTCCTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTACGCTGTGTAATTCATaGAGAGCTGAGTGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: FFLLQLKGHCQSAEEGNVTLCNS*RAECLL
Trigger: CAGCAGGCACTCAGCTCTTCATGAATTACACAGCGT...AACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAGGAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR TCA 90 bp ACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGACGCTGTGTAATTCATaGAGAGCTGAGTGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: TASVPVLIASVFTSQSSMTLCNS*RAECLL
Trigger: CAGCAGGCACTCAGCTCTTCATGAATTACACAGCGT...CATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAACAGGTACTGATGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp GCCCTGACTACGGTGTTATCATCAATAAGTTCCATCTTGCTGCAAGTTCCACTTAGCATTCAGACAAAGTaGTGCACCTCCCTTGGCAAT +
Preference number: 4 (lower is better)
Translates to: ALTTVLSSISSILLQVPLSIQTK*CTSLGN
Trigger: ATTGCCAAGGGAGGTGCAGCACTTTGTCTGAATGCT...AAGTGGAACTTGCAGCAAGATGGAACTTATTGATGATAACACCGTAGTCAGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522756.6
CDS-3UTR GCA 90 bp CCAGCCTGGGTAACAGAGGGAGGCTCTTTTCTGGAACTATCTTTTCAAATGATTAGTGCTAGGTCTCGGTaGTCCTCACTTACAAACCTA +
Preference number: 4 (lower is better)
Translates to: PAWVTEGGSFLELSFQMISARSR*SSLTNL
Trigger: TAGGTTTGTAAGTGAGGAGCACCGAGACCTAGCACT...AATCATTTGAAAAGATAGTTCCAGAAAAGAGCCTCCCTCTGTTACCCAGGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522756.6
CDS-3UTR GCA 90 bp ACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCCAGTAATAGGGCAATaGTGTCCAAAGAAGGCCACC +
Preference number: 4 (lower is better)
Translates to: TASVPVLIASVFTSQSSMPVIGQ*CPKKAT
Trigger: GGTGGCCTTCTTTGGACAGCATTGCCCTATTACTGG...CATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAACAGGTACTGATGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp TTCTTCCTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTCTGCTGAACTTCAGCTaGTGTGCTCCTGAAGAGTTC +
Preference number: 4 (lower is better)
Translates to: FFLLQLKGHCQSAEEGNVLLNFS*CAPEEF
Trigger: GAACTCTTCAGGAGCACAGCAGCTGAAGTTCAGCAG...AACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAGGAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR GCA 90 bp TTCTTCCTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTGTCCTCAATTGTGGCTaGATAGGGAAGACCTCGAAG +
Preference number: 4 (lower is better)
Translates to: FFLLQLKGHCQSAEEGNVVLNCG*IGKTSK
Trigger: CTTCGAGGTCTTCCCTATGCAGCCACAATTGAGGAC...AACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAGGAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR GCA 90 bp ACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGTGTGGAGGGCTGCAGTaGTCGTGGATTCAAAATCAC +
Preference number: 4 (lower is better)
Translates to: TASVPVLIASVFTSQSSMCGGLQ*SWIQNH
Trigger: GTGATTTTGAATCCACGAGCACTGCAGCCCTCCACA...CATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAACAGGTACTGATGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp GTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTATACGCTGTGGAGGGCTaGAGTGCTCGTGGATTCAAA +
Preference number: 4 (lower is better)
Translates to: VLIASVFTSQSSMLTIVLYAVEG*SARGFK
Trigger: TTTGAATCCACGAGCACTGCAGCCCTCCACAGCGTA...TAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp ATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTATGCTTTTACGCTGTGGAGGGCTaGAGTGCTCGTGGATTCAAA +
Preference number: 4 (lower is better)
Translates to: IASVFTSQSSMLTIVLCFYAVEG*SARGFK
Trigger: TTTGAATCCACGAGCACTGCAGCCCTCCACAGCGTA...AAAGCATAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp ACACAGCTAAACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCGAAGAGCTGAGTGCCTaGTGGGTAGTACGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: TQLNIVLNTDSISTCSNCEELSA*WVVRCG
Trigger: TCCACAGCGTACTACCCAGCAGGCACTCAGCTCTTC...GCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTTTAGCTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CCA 90 bp ACACAGCTAAACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCCGGGAGGCGGTAAGGTaGTGTGGAAGTGAGAACGAA +
Preference number: 4 (lower is better)
Translates to: TQLNIVLNTDSISTCSNCREAVR*CGSENE
Trigger: TTCGTTCTCACTTCCACACCACCTTACCGCCTCCCG...GCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTTTAGCTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000646773.1
CDS-3UTR CCA 90 bp ATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTATGCTTTGTCCCACCTTCTTGTTaGCCAGATCCACGACTTTCC +
Preference number: 4 (lower is better)
Translates to: IASVFTSQSSMLTIVLCFVPPSC*PDPRLS
Trigger: GGAAAGTCGTGGATCTGGCCAACAAGAAGGTGGGAC...AAAGCATAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000646773.1
CDS-3UTR CCA 90 bp GCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTCAAAAGCGTCCCCTGTTaGCCTACCATCTGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: ALGSFGHLKASSIQKFLFKSVPC*PTIWVG
Trigger: ACCTACCCAGATGGTAGGCCAACAGGGGACGCTTTT...GAAAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CCA 90 bp TCAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGGGGAGGGGTTGGAAGTaGAATGAGAGGGGCCGAGGA +
Preference number: 4 (lower is better)
Translates to: SVSVLFSRIHCSNCLTSGGRGWK*NERGRG
Trigger: TCCTCGGCCCCTCTCATTCCACTTCCAACCCCTCCC...CCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTGA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CCA 90 bp TTCTTCCTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTAATAATGGGAGGGGTTaGAAGTGGAATGAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: FFLLQLKGHCQSAEEGNVNNGRG*KWNERG
Trigger: GCCCCTCTCATTCCACTTCCAACCCCTCCCATTATT...AACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAGGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CCA 90 bp ACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGGGATGTCCTCAATTGTaGCTGCATAGGGAAGACCTC +
Preference number: 4 (lower is better)
Translates to: TASVPVLIASVFTSQSSMGCPQL*LHREDL
Trigger: GAGGTCTTCCCTATGCAGCCACAATTGAGGACATCC...CATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAACAGGTACTGATGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CCA 90 bp GCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTCAACTGCAGCAGGAGCTaGAAATGTGTAGGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: ALGSFGHLKASSIQKFLFNCSRS*KCVGGR
Trigger: CCTCCCTCCTACACATTTCCAGCTCCTGCTGCAGTT...GAAAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CCA 90 bp GTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTAAACTGCAGCAGGAGCTaGAAATGTGTAGGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: VLIASVFTSQSSMLTIVLNCSRS*KCVGGR
Trigger: CCTCCCTCCTACACATTTCCAGCTCCTGCTGCAGTT...TAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CCA 90 bp ATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTATGCTTTAACTGCAGCAGGAGCTaGAAATGTGTAGGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: IASVFTSQSSMLTIVLCFNCSRS*KCVGGR
Trigger: CCTCCCTCCTACACATTTCCAGCTCCTGCTGCAGTT...AAAGCATAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CCA 90 bp GCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTCGGGCTGCAGTGCTCGTaGATTCAAAATCACAGAGGG +
Preference number: 4 (lower is better)
Translates to: ALGSFGHLKASSIQKFLFGLQCS*IQNHRG
Trigger: CCCTCTGTGATTTTGAATCCACGAGCACTGCAGCCC...GAAAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CCA 90 bp CAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGACTGGGTAGTACGCTGTaGAGGGCTGCAGTGCTCGTG +
Preference number: 4 (lower is better)
Translates to: QLVYCFLEYTVQIVSLLGLGSTL*RAAVLV
Trigger: CACGAGCACTGCAGCCCTCCACAGCGTACTACCCAG...TCCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CCA 90 bp ACACAGCTAAACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCACTATTAGGCGAACCTaGGGGGCTGGGATAGTACGC +
Preference number: 4 (lower is better)
Translates to: TQLNIVLNTDSISTCSNCTIRRT*GAGIVR
Trigger: GCGTACTATCCCAGCCCCCCAGGTTCGCCTAATAGT...GCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTTTAGCTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
CDS-3UTR TCA 90 bp ACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCAGTTCATTGCTCACTaGCTGGTTAAACTGTCGGAG +
Preference number: 4 (lower is better)
Translates to: TASVPVLIASVFTSQSSMQFIAH*LVKLSE
Trigger: CTCCGACAGTTTAACCAGTCAGTGAGCAATGAACTG...CATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAACAGGTACTGATGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000646773.1
CDS-3UTR TCA 90 bp GTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTAAGGATTTGCCTGACATaGAGCTGCCCATCAGTACAG +
Preference number: 4 (lower is better)
Translates to: VLIASVFTSQSSMLTIVLRICLT*SCPSVQ
Trigger: CTGTACTGATGGGCAGCTTCATGTCAGGCAAATCCT...TAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000646773.1
CDS-3UTR TCA 90 bp GAGCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTAGGATTTGCCTGACATaGAGCTGCCCATCAGTACAG +
Preference number: 4 (lower is better)
Translates to: ELWAALGILRHQVYRNFFRICLT*SCPSVQ
Trigger: CTGTACTGATGGGCAGCTTCATGTCAGGCAAATCCT...AAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
CDS-3UTR TCA 90 bp ACACAGCTAAACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCGATGCAGGATTTGCCTaGCATGAAGCTGCCCATCAG +
Preference number: 4 (lower is better)
Translates to: TQLNIVLNTDSISTCSNCDAGFA*HEAAHQ
Trigger: CTGATGGGCAGCTTCATGTCAGGCAAATCCTGCATC...GCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTTTAGCTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000646773.1
CDS-3UTR TCA 90 bp TTCTTCCTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTCCCATATCTTCAACTTaGGAGGCTCCATATCGAGAG +
Preference number: 4 (lower is better)
Translates to: FFLLQLKGHCQSAEEGNVPISST*EAPYRE
Trigger: CTCTCGATATGGAGCCTCTCAAGTTGAAGATATGGG...AACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAGGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR TCA 90 bp TTCTTCCTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTGTAAACCTCGTGCCCTaGCTACGGTGTTATCATCAA +
Preference number: 4 (lower is better)
Translates to: FFLLQLKGHCQSAEEGNVVNLVP*LRCYHQ
Trigger: TTGATGATAACACCGTAGTCAGGGCACGAGGTTTAC...AACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAGGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR TCA 90 bp ACACAGCTAAACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCCCGTTCCTTCGACCCTaGGCATTCAGACAAAGTGCT +
Preference number: 4 (lower is better)
Translates to: TQLNIVLNTDSISTCSNCPFLRP*AFRQSA
Trigger: AGCACTTTGTCTGAATGCTCAGGGTCGAAGGAACGG...GCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTTTAGCTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp ATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTATGCTTTTACCATCTGGGTAGGTaGCAAAGAGGATGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: IASVFTSQSSMLTIVLCFYHLGR*QRGCLP
Trigger: AGGAAGGCATCCTCTTTGTCACCTACCCAGATGGTA...AAAGCATAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp ACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGGGGGGCACAAATTGCTaGGGTAGTACTGGAATAATG +
Preference number: 4 (lower is better)
Translates to: TASVPVLIASVFTSQSSMGGTNC*GSTGIM
Trigger: CATTATTCCAGTACTACCTCAGCAATTTGTGCCCCC...CATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAACAGGTACTGATGCTGT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp GAGCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTACGCTGTGTAATTCATaGAGAGCTGAGTGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: ELWAALGILRHQVYRNFFTLCNS*RAECLL
Trigger: CAGCAGGCACTCAGCTCTTCATGAATTACACAGCGT...AAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR TCA 90 bp ATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTATGCTTTACGCTGTGTAATTCATaGAGAGCTGAGTGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: IASVFTSQSSMLTIVLCFTLCNS*RAECLL
Trigger: CAGCAGGCACTCAGCTCTTCATGAATTACACAGCGT...AAAGCATAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp TTCTTCCTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTCTAACTAGCACTTCGTaGAACTGTCCCACCTTCTTG +
Preference number: 4 (lower is better)
Translates to: FFLLQLKGHCQSAEEGNVLTSTS*NCPTFL
Trigger: CAAGAAGGTGGGACAGTTGCACGAAGTGCTAGTTAG...AACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAGGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
CDS-3UTR GCA 90 bp TTCTTCCTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTAGCATTCAGACAAAGTaGTGCACCTCCCTTGGCAAT +
Preference number: 4 (lower is better)
Translates to: FFLLQLKGHCQSAEEGNVSIQTK*CTSLGN
Trigger: ATTGCCAAGGGAGGTGCAGCACTTTGTCTGAATGCT...AACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAGGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR GCA 90 bp ACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGAGTGCTAGGTCTCGGTaGTCCTCACTTACAAACCTA +
Preference number: 4 (lower is better)
Translates to: TASVPVLIASVFTSQSSMSARSR*SSLTNL
Trigger: TAGGTTTGTAAGTGAGGAGCACCGAGACCTAGCACT...CATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAACAGGTACTGATGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp ATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTATGCTTTCCAGTAATAGGGCAATaGTGTCCAAAGAAGGCCACC +
Preference number: 4 (lower is better)
Translates to: IASVFTSQSSMLTIVLCFPVIGQ*CPKKAT
Trigger: GGTGGCCTTCTTTGGACAGCATTGCCCTATTACTGG...AAAGCATAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp GTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTACCAGTAATAGGGCAATaGTGTCCAAAGAAGGCCACC +
Preference number: 4 (lower is better)
Translates to: VLIASVFTSQSSMLTIVLPVIGQ*CPKKAT
Trigger: GGTGGCCTTCTTTGGACAGCATTGCCCTATTACTGG...TAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp GAGCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTCCAGTAATAGGGCAATaGTGTCCAAAGAAGGCCACC +
Preference number: 4 (lower is better)
Translates to: ELWAALGILRHQVYRNFFPVIGQ*CPKKAT
Trigger: GGTGGCCTTCTTTGGACAGCATTGCCCTATTACTGG...AAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR GCA 90 bp ATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTATGCTTTCTGCTGAACTTCAGCTaGTGTGCTCCTGAAGAGTTC +
Preference number: 4 (lower is better)
Translates to: IASVFTSQSSMLTIVLCFLLNFS*CAPEEF
Trigger: GAACTCTTCAGGAGCACAGCAGCTGAAGTTCAGCAG...AAAGCATAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp GCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTCGTCCTCAATTGTGGCTaGATAGGGAAGACCTCGAAG +
Preference number: 4 (lower is better)
Translates to: ALGSFGHLKASSIQKFLFVLNCG*IGKTSK
Trigger: CTTCGAGGTCTTCCCTATGCAGCCACAATTGAGGAC...GAAAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR GCA 90 bp GTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTAGTCCTCAATTGTGGCTaGATAGGGAAGACCTCGAAG +
Preference number: 4 (lower is better)
Translates to: VLIASVFTSQSSMLTIVLVLNCG*IGKTSK
Trigger: CTTCGAGGTCTTCCCTATGCAGCCACAATTGAGGAC...TAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp ACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGTGCAGCCATAAATaGTCTGTCCGCAGACTTCAT +
Preference number: 4 (lower is better)
Translates to: TASVPVLIASVFTSQSSMLCSHK*SVRRLH
Trigger: ATGAAGTCTGCGGACAGAGCATTTATGGCTGCACAG...CATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAACAGGTACTGATGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp TTCTTCCTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTCTGTGCAGCCATAAATaGTCTGTCCGCAGACTTCAT +
Preference number: 4 (lower is better)
Translates to: FFLLQLKGHCQSAEEGNVLCSHK*SVRRLH
Trigger: ATGAAGTCTGCGGACAGAGCATTTATGGCTGCACAG...AACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAGGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR GCA 90 bp GCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTCTGTGGAGGGCTGCAGTaGTCGTGGATTCAAAATCAC +
Preference number: 4 (lower is better)
Translates to: ALGSFGHLKASSIQKFLFCGGLQ*SWIQNH
Trigger: GTGATTTTGAATCCACGAGCACTGCAGCCCTCCACA...GAAAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR GCA 90 bp GAGCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTGTGGAGGGCTGCAGTaGTCGTGGATTCAAAATCAC +
Preference number: 4 (lower is better)
Translates to: ELWAALGILRHQVYRNFFCGGLQ*SWIQNH
Trigger: GTGATTTTGAATCCACGAGCACTGCAGCCCTCCACA...AAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR GCA 90 bp ACACAGCTAAACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCTACGCTGTGGAGGGCTaGAGTGCTCGTGGATTCAAA +
Preference number: 4 (lower is better)
Translates to: TQLNIVLNTDSISTCSNCYAVEG*SARGFK
Trigger: TTTGAATCCACGAGCACTGCAGCCCTCCACAGCGTA...GCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTTTAGCTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp AACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTGAAGAGCTGAGTGCCTaGTGGGTAGTACGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: NIVLNTDSISTCSNCISVEELSA*WVVRCG
Trigger: TCCACAGCGTACTACCCAGCAGGCACTCAGCTCTTC...AACACTGATGCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CCA 90 bp AACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTCGGGAGGCGGTAAGGTaGTGTGGAAGTGAGAACGAA +
Preference number: 4 (lower is better)
Translates to: NIVLNTDSISTCSNCISVREAVR*CGSENE
Trigger: TTCGTTCTCACTTCCACACCACCTTACCGCCTCCCG...AACACTGATGCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000646773.1
CDS-3UTR CCA 90 bp ACACAGCTAAACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCGTCCCACCTTCTTGTTaGCCAGATCCACGACTTTCC +
Preference number: 4 (lower is better)
Translates to: TQLNIVLNTDSISTCSNCVPPSC*PDPRLS
Trigger: GGAAAGTCGTGGATCTGGCCAACAAGAAGGTGGGAC...GCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTTTAGCTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000646773.1
CDS-3UTR CCA 90 bp CTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTTGCTTCACTGGGCTACCTCATTaGAAGTACCACCAGCAATTT +
Preference number: 4 (lower is better)
Translates to: LLQLKGHCQSAEEGNVCFTGLPH*KYHQQF
Trigger: AAATTGCTGGTGGTACTTCCAATGAGGTAGCCCAGT...GAAGCAAACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CCA 90 bp CTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTTGCTTCTCCTTGGAGAGAAACTaGGCTACCTCATTGGAAGTA +
Preference number: 4 (lower is better)
Translates to: LLQLKGHCQSAEEGNVCFSLERN*ATSLEV
Trigger: TACTTCCAATGAGGTAGCCCAGTTTCTCTCCAAGGA...GAAGCAAACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CCA 90 bp TTCTTCCTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTTGTTGGCCTACCATCTaGGTAGGTGACAAAGAGGAT +
Preference number: 4 (lower is better)
Translates to: FFLLQLKGHCQSAEEGNVCWPTI*VGDKED
Trigger: ATCCTCTTTGTCACCTACCCAGATGGTAGGCCAACA...AACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAGGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CCA 90 bp ACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGTGTTGGCCTACCATCTaGGTAGGTGACAAAGAGGAT +
Preference number: 4 (lower is better)
Translates to: TASVPVLIASVFTSQSSMCWPTI*VGDKED
Trigger: ATCCTCTTTGTCACCTACCCAGATGGTAGGCCAACA...CATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAACAGGTACTGATGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CCA 90 bp ACACAGCTAAACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCAAAAGCGTCCCCTGTTaGCCTACCATCTGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: TQLNIVLNTDSISTCSNCKSVPC*PTIWVG
Trigger: ACCTACCCAGATGGTAGGCCAACAGGGGACGCTTTT...GCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTTTAGCTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CCA 90 bp GAGCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTAATAATGGGAGGGGTTaGAAGTGGAATGAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: ELWAALGILRHQVYRNFFNNGRG*KWNERG
Trigger: GCCCCTCTCATTCCACTTCCAACCCCTCCCATTATT...AAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CCA 90 bp GCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTCGGATGTCCTCAATTGTaGCTGCATAGGGAAGACCTC +
Preference number: 4 (lower is better)
Translates to: ALGSFGHLKASSIQKFLFGCPQL*LHREDL
Trigger: GAGGTCTTCCCTATGCAGCCACAATTGAGGACATCC...GAAAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CCA 90 bp GTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTAGGATGTCCTCAATTGTaGCTGCATAGGGAAGACCTC +
Preference number: 4 (lower is better)
Translates to: VLIASVFTSQSSMLTIVLGCPQL*LHREDL
Trigger: GAGGTCTTCCCTATGCAGCCACAATTGAGGACATCC...TAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CCA 90 bp TTCTTCCTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTGAGTACGAATATCTGTaGCGAACTCCCCCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: FFLLQLKGHCQSAEEGNVEYEYL*RTPPGN
Trigger: ATTTCCTGGGGGAGTTCGCCACAGATATTCGTACTC...AACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAGGAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CCA 90 bp CAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGACACCGTGCCAGGCTGTaGAGGGACACCGCTAAGATT +
Preference number: 4 (lower is better)
Translates to: QLVYCFLEYTVQIVSLLGHRARL*RDTAKI
Trigger: AATCTTAGCGGTGTCCCTCCACAGCCTGGCACGGTG...TCCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
CDS-3UTR CCA 90 bp ACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTTTGGGTAGAGTCCTaGCCTGGTCATTTGTGTGTA +
Preference number: 4 (lower is better)
Translates to: TASVPVLIASVFTSQSSMLWVES*PGHLCV
Trigger: TACACACAAATGACCAGGCCAGGACTCTACCCAAAG...CATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAACAGGTACTGATGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358397.9
ENST00000433389.8
ENST00000519505.5
CDS-3UTR CCA 90 bp ACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGTACAAACCCATTCTTTaGGTAGAGTCCTGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: TASVPVLIASVFTSQSSMYKPIL*VESWPG
Trigger: ACCAGGCCAGGACTCTACCCAAAGAATGGGTTTGTA...CATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAACAGGTACTGATGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358397.9
ENST00000433389.8
ENST00000519505.5
CDS-3UTR CCA 90 bp TGCCATGGTAAACCTCGTGCCCTGACTACGGTGTTATCATCAATAAGTTCCATCTACACTCTGTCATTGTaGCAACGTCCAGTTTGTCAA +
Preference number: 4 (lower is better)
Translates to: CHGKPRALTTVLSSISSIYTLSL*QRPVCQ
Trigger: TTGACAAACTGGACGTTGCCACAATGACAGAGTGTA...GATGGAACTTATTGATGATAACACCGTAGTCAGGGCACGAGGTTTACCATGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522756.6
CDS-3UTR TCA 90 bp ACACAGCTAAACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCAGGATTTGCCTGACATaGAGCTGCCCATCAGTACAG +
Preference number: 4 (lower is better)
Translates to: TQLNIVLNTDSISTCSNCRICLT*SCPSVQ
Trigger: CTGTACTGATGGGCAGCTTCATGTCAGGCAAATCCT...GCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTTTAGCTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000646773.1
CDS-3UTR TCA 90 bp AACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTGATGCAGGATTTGCCTaGCATGAAGCTGCCCATCAG +
Preference number: 4 (lower is better)
Translates to: NIVLNTDSISTCSNCISVDAGFA*HEAAHQ
Trigger: CTGATGGGCAGCTTCATGTCAGGCAAATCCTGCATC...AACACTGATGCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000646773.1
CDS-3UTR TCA 90 bp GAGCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTCCCATATCTTCAACTTaGGAGGCTCCATATCGAGAG +
Preference number: 4 (lower is better)
Translates to: ELWAALGILRHQVYRNFFPISST*EAPYRE
Trigger: CTCTCGATATGGAGCCTCTCAAGTTGAAGATATGGG...AAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR TCA 90 bp GCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTCCCCATATCTTCAACTTaGGAGGCTCCATATCGAGAG +
Preference number: 4 (lower is better)
Translates to: ALGSFGHLKASSIQKFLFPISST*EAPYRE
Trigger: CTCTCGATATGGAGCCTCTCAAGTTGAAGATATGGG...GAAAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR TCA 90 bp GCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTCGTAAACCTCGTGCCCTaGCTACGGTGTTATCATCAA +
Preference number: 4 (lower is better)
Translates to: ALGSFGHLKASSIQKFLFVNLVP*LRCYHQ
Trigger: TTGATGATAACACCGTAGTCAGGGCACGAGGTTTAC...GAAAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR TCA 90 bp AACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTCCGTTCCTTCGACCCTaGGCATTCAGACAAAGTGCT +
Preference number: 4 (lower is better)
Translates to: NIVLNTDSISTCSNCISVPFLRP*AFRQSA
Trigger: AGCACTTTGTCTGAATGCTCAGGGTCGAAGGAACGG...AACACTGATGCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp ACACAGCTAAACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCTACCATCTGGGTAGGTaGCAAAGAGGATGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: TQLNIVLNTDSISTCSNCYHLGR*QRGCLP
Trigger: AGGAAGGCATCCTCTTTGTCACCTACCCAGATGGTA...GCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTTTAGCTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp TCAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGCGATTCAGCACCTGCTaGACTTCAGCTGCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: SVSVLFSRIHCSNCLTSGRFSTC*TSAAVL
Trigger: GAGCACAGCAGCTGAAGTTCAGCAGGTGCTGAATCG...CCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp ATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTATGCTTTGGGGGCACAAATTGCTaGGGTAGTACTGGAATAATG +
Preference number: 4 (lower is better)
Translates to: IASVFTSQSSMLTIVLCFGGTNC*GSTGIM
Trigger: CATTATTCCAGTACTACCTCAGCAATTTGTGCCCCC...AAAGCATAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp ACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCCATTGCCAGTCAGCTaGAGAAGGAAATGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: TASVPVLIASVFTSQSSMPLPVS*RRKCLL
Trigger: AAGCAAACATTTCCTTCTTCAGCTGACTGGCAATGG...CATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAACAGGTACTGATGCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp TTCTTCCTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTCCATTGCCAGTCAGCTaGAGAAGGAAATGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: FFLLQLKGHCQSAEEGNVPLPVS*RRKCLL
Trigger: AAGCAAACATTTCCTTCTTCAGCTGACTGGCAATGG...AACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAGGAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR GCA 90 bp GCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTCCTAACTAGCACTTCGTaGAACTGTCCCACCTTCTTG +
Preference number: 4 (lower is better)
Translates to: ALGSFGHLKASSIQKFLFLTSTS*NCPTFL
Trigger: CAAGAAGGTGGGACAGTTGCACGAAGTGCTAGTTAG...GAAAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
CDS-3UTR GCA 90 bp ATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTATGCTTTCTAACTAGCACTTCGTaGAACTGTCCCACCTTCTTG +
Preference number: 4 (lower is better)
Translates to: IASVFTSQSSMLTIVLCFLTSTS*NCPTFL
Trigger: CAAGAAGGTGGGACAGTTGCACGAAGTGCTAGTTAG...AAAGCATAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000646773.1
CDS-3UTR GCA 90 bp GAGCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTAGCATTCAGACAAAGTaGTGCACCTCCCTTGGCAAT +
Preference number: 4 (lower is better)
Translates to: ELWAALGILRHQVYRNFFSIQTK*CTSLGN
Trigger: ATTGCCAAGGGAGGTGCAGCACTTTGTCTGAATGCT...AAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR GCA 90 bp ATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTATGCTTTAGTGCTAGGTCTCGGTaGTCCTCACTTACAAACCTA +
Preference number: 4 (lower is better)
Translates to: IASVFTSQSSMLTIVLCFSARSR*SSLTNL
Trigger: TAGGTTTGTAAGTGAGGAGCACCGAGACCTAGCACT...AAAGCATAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp GTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTAAGTGCTAGGTCTCGGTaGTCCTCACTTACAAACCTA +
Preference number: 4 (lower is better)
Translates to: VLIASVFTSQSSMLTIVLSARSR*SSLTNL
Trigger: TAGGTTTGTAAGTGAGGAGCACCGAGACCTAGCACT...TAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp ACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCCTCAACGCATTCTGTaGATATTCCTCACAGGCAAA +
Preference number: 4 (lower is better)
Translates to: TASVPVLIASVFTSQSSMPQRIL*IFLTGK
Trigger: TTTGCCTGTGAGGAATATGCACAGAATGCGTTGAGG...CATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAACAGGTACTGATGCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp TTCTTCCTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTCCTCAACGCATTCTGTaGATATTCCTCACAGGCAAA +
Preference number: 4 (lower is better)
Translates to: FFLLQLKGHCQSAEEGNVPQRIL*IFLTGK
Trigger: TTTGCCTGTGAGGAATATGCACAGAATGCGTTGAGG...AACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAGGAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR GCA 90 bp ACACAGCTAAACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCCTGCTGAACTTCAGCTaGTGTGCTCCTGAAGAGTTC +
Preference number: 4 (lower is better)
Translates to: TQLNIVLNTDSISTCSNCLLNFS*CAPEEF
Trigger: GAACTCTTCAGGAGCACAGCAGCTGAAGTTCAGCAG...GCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTTTAGCTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp ACACAGCTAAACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCGTCCTCAATTGTGGCTaGATAGGGAAGACCTCGAAG +
Preference number: 4 (lower is better)
Translates to: TQLNIVLNTDSISTCSNCVLNCG*IGKTSK
Trigger: CTTCGAGGTCTTCCCTATGCAGCCACAATTGAGGAC...GCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTTTAGCTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp GCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTCCTGTGCAGCCATAAATaGTCTGTCCGCAGACTTCAT +
Preference number: 4 (lower is better)
Translates to: ALGSFGHLKASSIQKFLFLCSHK*SVRRLH
Trigger: ATGAAGTCTGCGGACAGAGCATTTATGGCTGCACAG...GAAAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR GCA 90 bp GTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTACTGTGCAGCCATAAATaGTCTGTCCGCAGACTTCAT +
Preference number: 4 (lower is better)
Translates to: VLIASVFTSQSSMLTIVLLCSHK*SVRRLH
Trigger: ATGAAGTCTGCGGACAGAGCATTTATGGCTGCACAG...TAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp CAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGAGAAGAGCTGAGTGCCTaGTGGGTAGTACGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: QLVYCFLEYTVQIVSLLGEELSA*WVVRCG
Trigger: TCCACAGCGTACTACCCAGCAGGCACTCAGCTCTTC...TCCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CCA 90 bp GCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTCTCATTGCTCACTGACTaGTTAAACTGTCGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: ALGSFGHLKASSIQKFLFSLLTD*LNCRRA
Trigger: AGCCCTCCGACAGTTTAACCAGTCAGTGAGCAATGA...GAAAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
CDS-3UTR CCA 90 bp TTCTTCCTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTACTGGGCTACCTCATTaGAAGTACCACCAGCAATTT +
Preference number: 4 (lower is better)
Translates to: FFLLQLKGHCQSAEEGNVTGLPH*KYHQQF
Trigger: AAATTGCTGGTGGTACTTCCAATGAGGTAGCCCAGT...AACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAGGAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CCA 90 bp GCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTCTGTTGGCCTACCATCTaGGTAGGTGACAAAGAGGAT +
Preference number: 4 (lower is better)
Translates to: ALGSFGHLKASSIQKFLFCWPTI*VGDKED
Trigger: ATCCTCTTTGTCACCTACCCAGATGGTAGGCCAACA...GAAAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CCA 90 bp GTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTAGAGTACGAATATCTGTaGCGAACTCCCCCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: VLIASVFTSQSSMLTIVLEYEYL*RTPPGN
Trigger: ATTTCCTGGGGGAGTTCGCCACAGATATTCGTACTC...TAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CCA 90 bp GCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTCGAGTACGAATATCTGTaGCGAACTCCCCCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: ALGSFGHLKASSIQKFLFEYEYL*RTPPGN
Trigger: ATTTCCTGGGGGAGTTCGCCACAGATATTCGTACTC...GAAAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CCA 90 bp ATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTATGCTTTGAGTACGAATATCTGTaGCGAACTCCCCCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: IASVFTSQSSMLTIVLCFEYEYL*RTPPGN
Trigger: ATTTCCTGGGGGAGTTCGCCACAGATATTCGTACTC...AAAGCATAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CCA 90 bp ATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTATGCTTTTACAAACCCATTCTTTaGGTAGAGTCCTGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: IASVFTSQSSMLTIVLCFYKPIL*VESWPG
Trigger: ACCAGGCCAGGACTCTACCCAAAGAATGGGTTTGTA...AAAGCATAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358397.9
ENST00000433389.8
ENST00000519505.5
CDS-3UTR CCA 90 bp TTCTTCCTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTTCCTCGGTTGCATACTaGGATAGTACGCTGTGTAAT +
Preference number: 4 (lower is better)
Translates to: FFLLQLKGHCQSAEEGNVSSVAY*DSTLCN
Trigger: ATTACACAGCGTACTATCCCAGTATGCAACCGAGGA...AACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAGGAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519505.5
CDS-3UTR TCA 90 bp ACACAGCTAAACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCCAGTTCATTGCTCACTaGCTGGTTAAACTGTCGGAG +
Preference number: 4 (lower is better)
Translates to: TQLNIVLNTDSISTCSNCQFIAH*LVKLSE
Trigger: CTCCGACAGTTTAACCAGTCAGTGAGCAATGAACTG...GCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTTTAGCTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000646773.1
CDS-3UTR TCA 90 bp TCAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGGATGCAGGATTTGCCTaGCATGAAGCTGCCCATCAG +
Preference number: 4 (lower is better)
Translates to: SVSVLFSRIHCSNCLTSGDAGFA*HEAAHQ
Trigger: CTGATGGGCAGCTTCATGTCAGGCAAATCCTGCATC...CCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000646773.1
CDS-3UTR TCA 90 bp ACACAGCTAAACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCCCCATATCTTCAACTTaGGAGGCTCCATATCGAGAG +
Preference number: 4 (lower is better)
Translates to: TQLNIVLNTDSISTCSNCPISST*EAPYRE
Trigger: CTCTCGATATGGAGCCTCTCAAGTTGAAGATATGGG...GCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTTTAGCTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp ACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCACTCTCTCTGGATCTaGAAACCTGTGATTATAAGG +
Preference number: 4 (lower is better)
Translates to: TASVPVLIASVFTSQSSMHSLWI*KPVIIR
Trigger: CCTTATAATCACAGGTTTTCAGATCCAGAGAGAGTG...CATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAACAGGTACTGATGCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp TCAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGTACCGGGTCCCCATGTaGTGTTTGTGCCTCTGTAGT +
Preference number: 4 (lower is better)
Translates to: SVSVLFSRIHCSNCLTSGYRVPM*CLCLCS
Trigger: ACTACAGAGGCACAAACATCACATGGGGACCCGGTA...CCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp CAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGATACCGGGTCCCCATGTaGTGTTTGTGCCTCTGTAGT +
Preference number: 4 (lower is better)
Translates to: QLVYCFLEYTVQIVSLLGYRVPM*CLCLCS
Trigger: ACTACAGAGGCACAAACATCACATGGGGACCCGGTA...TCCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp ACACAGCTAAACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCGGGGGCACAAATTGCTaGGGTAGTACTGGAATAATG +
Preference number: 4 (lower is better)
Translates to: TQLNIVLNTDSISTCSNCGGTNC*GSTGIM
Trigger: CATTATTCCAGTACTACCTCAGCAATTTGTGCCCCC...GCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTTTAGCTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp AACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTACGCTGTGTAATTCATaGAGAGCTGAGTGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: NIVLNTDSISTCSNCISVTLCNS*RAECLL
Trigger: CAGCAGGCACTCAGCTCTTCATGAATTACACAGCGT...AACACTGATGCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp ACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCATAGTGTTAAACACTaGCAGCATCAGTACCTGTTC +
Preference number: 4 (lower is better)
Translates to: TASVPVLIASVFTSQSSMHSVKH*QHQYLF
Trigger: GAACAGGTACTGATGCTGTCAGTGTTTAACACTATG...CATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAACAGGTACTGATGCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp ACACAGCTAAACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCAGCATTCAGACAAAGTaGTGCACCTCCCTTGGCAAT +
Preference number: 4 (lower is better)
Translates to: TQLNIVLNTDSISTCSNCSIQTK*CTSLGN
Trigger: ATTGCCAAGGGAGGTGCAGCACTTTGTCTGAATGCT...GCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTTTAGCTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp AACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTCCAGTAATAGGGCAATaGTGTCCAAAGAAGGCCACC +
Preference number: 4 (lower is better)
Translates to: NIVLNTDSISTCSNCISVPVIGQ*CPKKAT
Trigger: GGTGGCCTTCTTTGGACAGCATTGCCCTATTACTGG...AACACTGATGCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp GAGCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTCCTCAACGCATTCTGTaGATATTCCTCACAGGCAAA +
Preference number: 4 (lower is better)
Translates to: ELWAALGILRHQVYRNFFPQRIL*IFLTGK
Trigger: TTTGCCTGTGAGGAATATGCACAGAATGCGTTGAGG...AAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR GCA 90 bp ATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTATGCTTTCCTCAACGCATTCTGTaGATATTCCTCACAGGCAAA +
Preference number: 4 (lower is better)
Translates to: IASVFTSQSSMLTIVLCFPQRIL*IFLTGK
Trigger: TTTGCCTGTGAGGAATATGCACAGAATGCGTTGAGG...AAAGCATAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp GTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTACCTCAACGCATTCTGTaGATATTCCTCACAGGCAAA +
Preference number: 4 (lower is better)
Translates to: VLIASVFTSQSSMLTIVLPQRIL*IFLTGK
Trigger: TTTGCCTGTGAGGAATATGCACAGAATGCGTTGAGG...TAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp ACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCCCAACAAGTCTTTATaGTTCCTCAACGCATTCTGT +
Preference number: 4 (lower is better)
Translates to: TASVPVLIASVFTSQSSMPNKSL*FLNAFC
Trigger: ACAGAATGCGTTGAGGAAGCATAAAGACTTGTTGGG...CATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAACAGGTACTGATGCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp AACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTCTGCTGAACTTCAGCTaGTGTGCTCCTGAAGAGTTC +
Preference number: 4 (lower is better)
Translates to: NIVLNTDSISTCSNCISVLLNFS*CAPEEF
Trigger: GAACTCTTCAGGAGCACAGCAGCTGAAGTTCAGCAG...AACACTGATGCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp ACACAGCTAAACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCCTGTGCAGCCATAAATaGTCTGTCCGCAGACTTCAT +
Preference number: 4 (lower is better)
Translates to: TQLNIVLNTDSISTCSNCLCSHK*SVRRLH
Trigger: ATGAAGTCTGCGGACAGAGCATTTATGGCTGCACAG...GCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTTTAGCTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CCA 90 bp ACACAGCTAAACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCTCATTGCTCACTGACTaGTTAAACTGTCGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: TQLNIVLNTDSISTCSNCSLLTD*LNCRRA
Trigger: AGCCCTCCGACAGTTTAACCAGTCAGTGAGCAATGA...GCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTTTAGCTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000646773.1
CDS-3UTR CCA 90 bp ATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTATGCTTTACTGGGCTACCTCATTaGAAGTACCACCAGCAATTT +
Preference number: 4 (lower is better)
Translates to: IASVFTSQSSMLTIVLCFTGLPH*KYHQQF
Trigger: AAATTGCTGGTGGTACTTCCAATGAGGTAGCCCAGT...AAAGCATAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CCA 90 bp ATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTATGCTTTTCCTTGGAGAGAAACTaGGCTACCTCATTGGAAGTA +
Preference number: 4 (lower is better)
Translates to: IASVFTSQSSMLTIVLCFSLERN*ATSLEV
Trigger: TACTTCCAATGAGGTAGCCCAGTTTCTCTCCAAGGA...AAAGCATAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CCA 90 bp ACACAGCTAAACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCGAGTACGAATATCTGTaGCGAACTCCCCCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: TQLNIVLNTDSISTCSNCEYEYL*RTPPGN
Trigger: ATTTCCTGGGGGAGTTCGCCACAGATATTCGTACTC...GCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTTTAGCTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CCA 90 bp GAGCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTCCGCAGACTTCATCTaGATAAAGGCATCTCCTGAT +
Preference number: 4 (lower is better)
Translates to: ELWAALGILRHQVYRNFFSADFI*IKASPD
Trigger: ATCAGGAGATGCCTTTATCCAGATGAAGTCTGCGGA...AAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CCA 90 bp TCAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGGGGCTGCAGTGCTCGTaGATTCAAAATCACAGAGGG +
Preference number: 4 (lower is better)
Translates to: SVSVLFSRIHCSNCLTSGGLQCS*IQNHRG
Trigger: CCCTCTGTGATTTTGAATCCACGAGCACTGCAGCCC...CCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTGA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CCA 90 bp ATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTATGCTTTGGTAGAGTCCTGGCCTaGTCATTTGTGTGTATAAGT +
Preference number: 4 (lower is better)
Translates to: IASVFTSQSSMLTIVLCFGRVLA*SFVCIS
Trigger: ACTTATACACACAAATGACCAGGCCAGGACTCTACC...AAAGCATAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358397.9
ENST00000433389.8
ENST00000519505.5
CDS-3UTR CCA 90 bp GTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTAGGTAGAGTCCTGGCCTaGTCATTTGTGTGTATAAGT +
Preference number: 4 (lower is better)
Translates to: VLIASVFTSQSSMLTIVLGRVLA*SFVCIS
Trigger: ACTTATACACACAAATGACCAGGCCAGGACTCTACC...TAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358397.9
ENST00000433389.8
ENST00000519505.5
CDS-3UTR CCA 90 bp ACACAGCTAAACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCCTTTGGGTAGAGTCCTaGCCTGGTCATTTGTGTGTA +
Preference number: 4 (lower is better)
Translates to: TQLNIVLNTDSISTCSNCLWVES*PGHLCV
Trigger: TACACACAAATGACCAGGCCAGGACTCTACCCAAAG...GCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTTTAGCTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358397.9
ENST00000433389.8
ENST00000519505.5
CDS-3UTR TCA 90 bp CAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGATCCGTCAGTTCCAACTaGTCCGGTCTAACTAGCACT +
Preference number: 4 (lower is better)
Translates to: QLVYCFLEYTVQIVSLLGSVSSN*SGLTST
Trigger: AGTGCTAGTTAGACCGGATCAGTTGGAACTGACGGA...TCCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000646773.1
CDS-3UTR TCA 90 bp TCAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGAGGATTTGCCTGACATaGAGCTGCCCATCAGTACAG +
Preference number: 4 (lower is better)
Translates to: SVSVLFSRIHCSNCLTSGRICLT*SCPSVQ
Trigger: CTGTACTGATGGGCAGCTTCATGTCAGGCAAATCCT...CCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000646773.1
CDS-3UTR TCA 90 bp GAGCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTCACTCTCTCTGGATCTaGAAACCTGTGATTATAAGG +
Preference number: 4 (lower is better)
Translates to: ELWAALGILRHQVYRNFFHSLWI*KPVIIR
Trigger: CCTTATAATCACAGGTTTTCAGATCCAGAGAGAGTG...AAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR TCA 90 bp GTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTACACTCTCTCTGGATCTaGAAACCTGTGATTATAAGG +
Preference number: 4 (lower is better)
Translates to: VLIASVFTSQSSMLTIVLHSLWI*KPVIIR
Trigger: CCTTATAATCACAGGTTTTCAGATCCAGAGAGAGTG...TAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp ATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTATGCTTTCACTCTCTCTGGATCTaGAAACCTGTGATTATAAGG +
Preference number: 4 (lower is better)
Translates to: IASVFTSQSSMLTIVLCFHSLWI*KPVIIR
Trigger: CCTTATAATCACAGGTTTTCAGATCCAGAGAGAGTG...AAAGCATAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp AACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTGTAAACCTCGTGCCCTaGCTACGGTGTTATCATCAA +
Preference number: 4 (lower is better)
Translates to: NIVLNTDSISTCSNCISVVNLVP*LRCYHQ
Trigger: TTGATGATAACACCGTAGTCAGGGCACGAGGTTTAC...AACACTGATGCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp ACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGAATCTTGCAATATCTTaGTCTGAAGACTGCCATGGT +
Preference number: 4 (lower is better)
Translates to: TASVPVLIASVFTSQSSMNLAIS*SEDCHG
Trigger: ACCATGGCAGTCTTCAGATCAAGATATTGCAAGATT...CATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAACAGGTACTGATGCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp TCAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGTACCATCTGGGTAGGTaGCAAAGAGGATGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: SVSVLFSRIHCSNCLTSGYHLGR*QRGCLP
Trigger: AGGAAGGCATCCTCTTTGTCACCTACCCAGATGGTA...CCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp TCAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGACGCTGTGTAATTCATaGAGAGCTGAGTGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: SVSVLFSRIHCSNCLTSGTLCNS*RAECLL
Trigger: CAGCAGGCACTCAGCTCTTCATGAATTACACAGCGT...CCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp GCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTCCAAACACTTCTTTTCTaGGGATGTTCTAACTGCTGG +
Preference number: 4 (lower is better)
Translates to: ALGSFGHLKASSIQKFLFQTLLF*GCSNCW
Trigger: CCAGCAGTTAGAACATCCTCAGAAAAGAAGTGTTTG...GAAAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358397.9
ENST00000433389.8
ENST00000519505.5
CDS-3UTR TCA 90 bp GTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTATCCAATCAAGTTTGCTaGAAATACTGCAGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: VLIASVFTSQSSMLTIVLSNQVC*KYCSLS
Trigger: ACTCAGGCTGCAGTATTTTCAGCAAACTTGATTGGA...TAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp GAGCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTCCAATCAAGTTTGCTaGAAATACTGCAGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: ELWAALGILRHQVYRNFFSNQVC*KYCSLS
Trigger: ACTCAGGCTGCAGTATTTTCAGCAAACTTGATTGGA...AAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR TCA 90 bp GCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTCCTTAGGAAACACCTATaGTGCCACTTTAACTGGAAG +
Preference number: 4 (lower is better)
Translates to: ALGSFGHLKASSIQKFLFLRKHL*CHFNWK
Trigger: CTTCCAGTTAAAGTGGCATCATAGGTGTTTCCTAAG...GAAAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR TCA 90 bp ATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTATGCTTTCATAGTGTTAAACACTaGCAGCATCAGTACCTGTTC +
Preference number: 4 (lower is better)
Translates to: IASVFTSQSSMLTIVLCFHSVKH*QHQYLF
Trigger: GAACAGGTACTGATGCTGTCAGTGTTTAACACTATG...AAAGCATAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp ACACAGCTAAACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCCCATTGCCAGTCAGCTaGAGAAGGAAATGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: TQLNIVLNTDSISTCSNCPLPVS*RRKCLL
Trigger: AAGCAAACATTTCCTTCTTCAGCTGACTGGCAATGG...GCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTTTAGCTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp AACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTCTAACTAGCACTTCGTaGAACTGTCCCACCTTCTTG +
Preference number: 4 (lower is better)
Translates to: NIVLNTDSISTCSNCISVLTSTS*NCPTFL
Trigger: CAAGAAGGTGGGACAGTTGCACGAAGTGCTAGTTAG...AACACTGATGCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000646773.1
CDS-3UTR GCA 90 bp GCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTCATTCAGACAAAGTGCTaGACCTCCCTTGGCAATATT +
Preference number: 4 (lower is better)
Translates to: ALGSFGHLKASSIQKFLFIQTKC*TSLGNI
Trigger: AATATTGCCAAGGGAGGTGCAGCACTTTGTCTGAAT...GAAAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR GCA 90 bp GTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTAATTCAGACAAAGTGCTaGACCTCCCTTGGCAATATT +
Preference number: 4 (lower is better)
Translates to: VLIASVFTSQSSMLTIVLIQTKC*TSLGNI
Trigger: AATATTGCCAAGGGAGGTGCAGCACTTTGTCTGAAT...TAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp ATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTATGCTTTATTCAGACAAAGTGCTaGACCTCCCTTGGCAATATT +
Preference number: 4 (lower is better)
Translates to: IASVFTSQSSMLTIVLCFIQTKC*TSLGNI
Trigger: AATATTGCCAAGGGAGGTGCAGCACTTTGTCTGAAT...AAAGCATAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp AACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTAGTGCTAGGTCTCGGTaGTCCTCACTTACAAACCTA +
Preference number: 4 (lower is better)
Translates to: NIVLNTDSISTCSNCISVSARSR*SSLTNL
Trigger: TAGGTTTGTAAGTGAGGAGCACCGAGACCTAGCACT...AACACTGATGCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp TCAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGCCAGTAATAGGGCAATaGTGTCCAAAGAAGGCCACC +
Preference number: 4 (lower is better)
Translates to: SVSVLFSRIHCSNCLTSGPVIGQ*CPKKAT
Trigger: GGTGGCCTTCTTTGGACAGCATTGCCCTATTACTGG...CCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp ATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTATGCTTTCCCAACAAGTCTTTATaGTTCCTCAACGCATTCTGT +
Preference number: 4 (lower is better)
Translates to: IASVFTSQSSMLTIVLCFPNKSL*FLNAFC
Trigger: ACAGAATGCGTTGAGGAAGCATAAAGACTTGTTGGG...AAAGCATAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp GCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTCCCCAACAAGTCTTTATaGTTCCTCAACGCATTCTGT +
Preference number: 4 (lower is better)
Translates to: ALGSFGHLKASSIQKFLFPNKSL*FLNAFC
Trigger: ACAGAATGCGTTGAGGAAGCATAAAGACTTGTTGGG...GAAAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR GCA 90 bp GAGCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTCCCAACAAGTCTTTATaGTTCCTCAACGCATTCTGT +
Preference number: 4 (lower is better)
Translates to: ELWAALGILRHQVYRNFFPNKSL*FLNAFC
Trigger: ACAGAATGCGTTGAGGAAGCATAAAGACTTGTTGGG...AAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR GCA 90 bp TCAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGCTGCTGAACTTCAGCTaGTGTGCTCCTGAAGAGTTC +
Preference number: 4 (lower is better)
Translates to: SVSVLFSRIHCSNCLTSGLLNFS*CAPEEF
Trigger: GAACTCTTCAGGAGCACAGCAGCTGAAGTTCAGCAG...CCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp CAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGAGTCCTCAATTGTGGCTaGATAGGGAAGACCTCGAAG +
Preference number: 4 (lower is better)
Translates to: QLVYCFLEYTVQIVSLLGVLNCG*IGKTSK
Trigger: CTTCGAGGTCTTCCCTATGCAGCCACAATTGAGGAC...TCCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp CTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTTGCTTCCATTTCGATTTAAAGTaGCCCCCATTAACACAAAGT +
Preference number: 4 (lower is better)
Translates to: LLQLKGHCQSAEEGNVCFHFDLK*PPLTQS
Trigger: ACTTTGTGTTAATGGGGGGCACTTTAAATCGAAATG...GAAGCAAACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR GCA 90 bp CAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGATGTGGAGGGCTGCAGTaGTCGTGGATTCAAAATCAC +
Preference number: 4 (lower is better)
Translates to: QLVYCFLEYTVQIVSLLGCGGLQ*SWIQNH
Trigger: GTGATTTTGAATCCACGAGCACTGCAGCCCTCCACA...TCCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp TCAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGTGTGGAGGGCTGCAGTaGTCGTGGATTCAAAATCAC +
Preference number: 4 (lower is better)
Translates to: SVSVLFSRIHCSNCLTSGCGGLQ*SWIQNH
Trigger: GTGATTTTGAATCCACGAGCACTGCAGCCCTCCACA...CCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp ACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGAAATCTGCACGGCATTaGATTCAAGCAAAGGACAAT +
Preference number: 4 (lower is better)
Translates to: TASVPVLIASVFTSQSSMKSARH*IQAKDN
Trigger: ATTGTCCTTTGCTTGAATGCAATGCCGTGCAGATTT...CATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAACAGGTACTGATGCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp TTCTTCCTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTAAATCTGCACGGCATTaGATTCAAGCAAAGGACAAT +
Preference number: 4 (lower is better)
Translates to: FFLLQLKGHCQSAEEGNVKSARH*IQAKDN
Trigger: ATTGTCCTTTGCTTGAATGCAATGCCGTGCAGATTT...AACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAGGAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CCA 90 bp ACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGAATACTCTGTCATTGTaGCAACGTCCAGTTTGTCAA +
Preference number: 4 (lower is better)
Translates to: TASVPVLIASVFTSQSSMNTLSL*QRPVCQ
Trigger: TTGACAAACTGGACGTTGCCACAATGACAGAGTATT...CATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAACAGGTACTGATGCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CCA 90 bp ACACAGCTAAACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCTCCTTGGAGAGAAACTaGGCTACCTCATTGGAAGTA +
Preference number: 4 (lower is better)
Translates to: TQLNIVLNTDSISTCSNCSLERN*ATSLEV
Trigger: TACTTCCAATGAGGTAGCCCAGTTTCTCTCCAAGGA...GCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTTTAGCTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CCA 90 bp TCAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGAATAATGGGAGGGGTTaGAAGTGGAATGAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: SVSVLFSRIHCSNCLTSGNNGRG*KWNERG
Trigger: GCCCCTCTCATTCCACTTCCAACCCCTCCCATTATT...CCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CCA 90 bp CAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGAAATAATGGGAGGGGTTaGAAGTGGAATGAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: QLVYCFLEYTVQIVSLLGNNGRG*KWNERG
Trigger: GCCCCTCTCATTCCACTTCCAACCCCTCCCATTATT...TCCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CCA 90 bp CAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGAGGATGTCCTCAATTGTaGCTGCATAGGGAAGACCTC +
Preference number: 4 (lower is better)
Translates to: QLVYCFLEYTVQIVSLLGGCPQL*LHREDL
Trigger: GAGGTCTTCCCTATGCAGCCACAATTGAGGACATCC...TCCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CCA 90 bp ACACAGCTAAACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCTCCGCAGACTTCATCTaGATAAAGGCATCTCCTGAT +
Preference number: 4 (lower is better)
Translates to: TQLNIVLNTDSISTCSNCSADFI*IKASPD
Trigger: ATCAGGAGATGCCTTTATCCAGATGAAGTCTGCGGA...GCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTTTAGCTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp CAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGACAGTTCATTGCTCACTaGCTGGTTAAACTGTCGGAG +
Preference number: 4 (lower is better)
Translates to: QLVYCFLEYTVQIVSLLGQFIAH*LVKLSE
Trigger: CTCCGACAGTTTAACCAGTCAGTGAGCAATGAACTG...TCCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000646773.1
CDS-3UTR TCA 90 bp GTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTATTTGTCAATATCAGGTaGACCAGGGCAACATTTCTT +
Preference number: 4 (lower is better)
Translates to: VLIASVFTSQSSMLTIVLFVNIR*TRATFL
Trigger: AAGAAATGTTGCCCTGGTTCACCTGATATTGACAAA...TAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp GCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTCTTTGTCAATATCAGGTaGACCAGGGCAACATTTCTT +
Preference number: 4 (lower is better)
Translates to: ALGSFGHLKASSIQKFLFFVNIR*TRATFL
Trigger: AAGAAATGTTGCCCTGGTTCACCTGATATTGACAAA...GAAAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR TCA 90 bp ATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTATGCTTTTTTGTCAATATCAGGTaGACCAGGGCAACATTTCTT +
Preference number: 4 (lower is better)
Translates to: IASVFTSQSSMLTIVLCFFVNIR*TRATFL
Trigger: AAGAAATGTTGCCCTGGTTCACCTGATATTGACAAA...AAAGCATAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAAT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp CAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGACCCATATCTTCAACTTaGGAGGCTCCATATCGAGAG +
Preference number: 4 (lower is better)
Translates to: QLVYCFLEYTVQIVSLLGPISST*EAPYRE
Trigger: CTCTCGATATGGAGCCTCTCAAGTTGAAGATATGGG...TCCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp ACACAGCTAAACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCCACTCTCTCTGGATCTaGAAACCTGTGATTATAAGG +
Preference number: 4 (lower is better)
Translates to: TQLNIVLNTDSISTCSNCHSLWI*KPVIIR
Trigger: CCTTATAATCACAGGTTTTCAGATCCAGAGAGAGTG...GCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTTTAGCTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp CAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGAGTAAACCTCGTGCCCTaGCTACGGTGTTATCATCAA +
Preference number: 4 (lower is better)
Translates to: QLVYCFLEYTVQIVSLLGVNLVP*LRCYHQ
Trigger: TTGATGATAACACCGTAGTCAGGGCACGAGGTTTAC...TCCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp GTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTAAATCTTGCAATATCTTaGTCTGAAGACTGCCATGGT +
Preference number: 4 (lower is better)
Translates to: VLIASVFTSQSSMLTIVLNLAIS*SEDCHG
Trigger: ACCATGGCAGTCTTCAGATCAAGATATTGCAAGATT...TAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp ATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTATGCTTTAATCTTGCAATATCTTaGTCTGAAGACTGCCATGGT +
Preference number: 4 (lower is better)
Translates to: IASVFTSQSSMLTIVLCFNLAIS*SEDCHG
Trigger: ACCATGGCAGTCTTCAGATCAAGATATTGCAAGATT...AAAGCATAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp CAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGAGGGGGCACAAATTGCTaGGGTAGTACTGGAATAATG +
Preference number: 4 (lower is better)
Translates to: QLVYCFLEYTVQIVSLLGGGTNC*GSTGIM
Trigger: CATTATTCCAGTACTACCTCAGCAATTTGTGCCCCC...TCCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp TCAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGGGGGGCACAAATTGCTaGGGTAGTACTGGAATAATG +
Preference number: 4 (lower is better)
Translates to: SVSVLFSRIHCSNCLTSGGGTNC*GSTGIM
Trigger: CATTATTCCAGTACTACCTCAGCAATTTGTGCCCCC...CCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTGA
40% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp ACACAGCTAAACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCTCCAATCAAGTTTGCTaGAAATACTGCAGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: TQLNIVLNTDSISTCSNCSNQVC*KYCSLS
Trigger: ACTCAGGCTGCAGTATTTTCAGCAAACTTGATTGGA...GCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTTTAGCTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp ACACAGCTAAACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCATTCAGACAAAGTGCTaGACCTCCCTTGGCAATATT +
Preference number: 4 (lower is better)
Translates to: TQLNIVLNTDSISTCSNCIQTKC*TSLGNI
Trigger: AATATTGCCAAGGGAGGTGCAGCACTTTGTCTGAAT...GCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTTTAGCTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp TCAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGAGCATTCAGACAAAGTaGTGCACCTCCCTTGGCAAT +
Preference number: 4 (lower is better)
Translates to: SVSVLFSRIHCSNCLTSGSIQTK*CTSLGN
Trigger: ATTGCCAAGGGAGGTGCAGCACTTTGTCTGAATGCT...CCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp CAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGAAGTGCTAGGTCTCGGTaGTCCTCACTTACAAACCTA +
Preference number: 4 (lower is better)
Translates to: QLVYCFLEYTVQIVSLLGSARSR*SSLTNL
Trigger: TAGGTTTGTAAGTGAGGAGCACCGAGACCTAGCACT...TCCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp CAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGACTGTGCAGCCATAAATaGTCTGTCCGCAGACTTCAT +
Preference number: 4 (lower is better)
Translates to: QLVYCFLEYTVQIVSLLGLCSHK*SVRRLH
Trigger: ATGAAGTCTGCGGACAGAGCATTTATGGCTGCACAG...TCCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp ACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCATTTCGATTTAAAGTaGCCCCCATTAACACAAAGT +
Preference number: 4 (lower is better)
Translates to: TASVPVLIASVFTSQSSMHFDLK*PPLTQS
Trigger: ACTTTGTGTTAATGGGGGGCACTTTAAATCGAAATG...CATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAACAGGTACTGATGCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp CTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTTGCTTCCTAACTACATGTAGCTaGTTCATTTTTCGTTTTGCA +
Preference number: 4 (lower is better)
Translates to: LLQLKGHCQSAEEGNVCFLTTCS*FIFRFA
Trigger: TGCAAAACGAAAAATGAAGCAGCTACATGTAGTTAG...GAAGCAAACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR GCA 90 bp CTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTTGCTTCCTTTTCGATCTTAAGTaGCAGTTATCACCAATTTTC +
Preference number: 4 (lower is better)
Translates to: LLQLKGHCQSAEEGNVCFLFDLK*QLSPIF
Trigger: GAAAATTGGTGATAACTGGCACTTAAGATCGAAAAG...GAAGCAAACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CCA 90 bp TCAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGTCATTGCTCACTGACTaGTTAAACTGTCGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: SVSVLFSRIHCSNCLTSGSLLTD*LNCRRA
Trigger: AGCCCTCCGACAGTTTAACCAGTCAGTGAGCAATGA...CCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000646773.1
CDS-3UTR CCA 90 bp GCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTCAATACTCTGTCATTGTaGCAACGTCCAGTTTGTCAA +
Preference number: 4 (lower is better)
Translates to: ALGSFGHLKASSIQKFLFNTLSL*QRPVCQ
Trigger: TTGACAAACTGGACGTTGCCACAATGACAGAGTATT...GAAAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CCA 90 bp ATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTATGCTTTAATACTCTGTCATTGTaGCAACGTCCAGTTTGTCAA +
Preference number: 4 (lower is better)
Translates to: IASVFTSQSSMLTIVLCFNTLSL*QRPVCQ
Trigger: TTGACAAACTGGACGTTGCCACAATGACAGAGTATT...AAAGCATAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CCA 90 bp AACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTACTGGGCTACCTCATTaGAAGTACCACCAGCAATTT +
Preference number: 4 (lower is better)
Translates to: NIVLNTDSISTCSNCISVTGLPH*KYHQQF
Trigger: AAATTGCTGGTGGTACTTCCAATGAGGTAGCCCAGT...AACACTGATGCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CCA 90 bp CAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGATGTTGGCCTACCATCTaGGTAGGTGACAAAGAGGAT +
Preference number: 4 (lower is better)
Translates to: QLVYCFLEYTVQIVSLLGCWPTI*VGDKED
Trigger: ATCCTCTTTGTCACCTACCCAGATGGTAGGCCAACA...TCCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CCA 90 bp TCAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGTGTTGGCCTACCATCTaGGTAGGTGACAAAGAGGAT +
Preference number: 4 (lower is better)
Translates to: SVSVLFSRIHCSNCLTSGCWPTI*VGDKED
Trigger: ATCCTCTTTGTCACCTACCCAGATGGTAGGCCAACA...CCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CCA 90 bp CAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGAGAGTACGAATATCTGTaGCGAACTCCCCCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: QLVYCFLEYTVQIVSLLGEYEYL*RTPPGN
Trigger: ATTTCCTGGGGGAGTTCGCCACAGATATTCGTACTC...TCCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CCA 90 bp AACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTCCGCAGACTTCATCTaGATAAAGGCATCTCCTGAT +
Preference number: 4 (lower is better)
Translates to: NIVLNTDSISTCSNCISVSADFI*IKASPD
Trigger: ATCAGGAGATGCCTTTATCCAGATGAAGTCTGCGGA...AACACTGATGCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CCA 90 bp TCAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGTACAAACCCATTCTTTaGGTAGAGTCCTGGCCTGGT +
Preference number: 4 (lower is better)
Translates to: SVSVLFSRIHCSNCLTSGYKPIL*VESWPG
Trigger: ACCAGGCCAGGACTCTACCCAAAGAATGGGTTTGTA...CCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358397.9
ENST00000433389.8
ENST00000519505.5
CDS-3UTR CCA 90 bp ACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGACTTTGTATGTTTTGTaGAGGGTGCACAATTTCTTC +
Preference number: 4 (lower is better)
Translates to: TASVPVLIASVFTSQSSMTLYVL*RVHNFF
Trigger: GAAGAAATTGTGCACCCTCCACAAAACATACAAAGT...CATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAACAGGTACTGATGCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CCA 90 bp ACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGACATCTTTCAAACACTaGGATAGTACGCTGTGTAAT +
Preference number: 4 (lower is better)
Translates to: TASVPVLIASVFTSQSSMTSFKH*DSTLCN
Trigger: ATTACACAGCGTACTATCCCAGTGTTTGAAAGATGT...CATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAACAGGTACTGATGCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454170.7
ENST00000646773.1
CDS-3UTR TCA 90 bp ATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTATGCTTTTCCATATCGAGAGACTaGACTACTCTTCTCAAAATT +
Preference number: 4 (lower is better)
Translates to: IASVFTSQSSMLTIVLCFSISRD*TTLLKI
Trigger: AATTTTGAGAAGAGTAGTTCAGTCTCTCGATATGGA...AAAGCATAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp GAGCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTCCATATCGAGAGACTaGACTACTCTTCTCAAAATT +
Preference number: 4 (lower is better)
Translates to: ELWAALGILRHQVYRNFFSISRD*TTLLKI
Trigger: AATTTTGAGAAGAGTAGTTCAGTCTCTCGATATGGA...AAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR TCA 90 bp AACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTCCAATCAAGTTTGCTaGAAATACTGCAGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: NIVLNTDSISTCSNCISVSNQVC*KYCSLS
Trigger: ACTCAGGCTGCAGTATTTTCAGCAAACTTGATTGGA...AACACTGATGCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp AACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTCATAGTGTTAAACACTaGCAGCATCAGTACCTGTTC +
Preference number: 4 (lower is better)
Translates to: NIVLNTDSISTCSNCISVHSVKH*QHQYLF
Trigger: GAACAGGTACTGATGCTGTCAGTGTTTAACACTATG...AACACTGATGCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp TCAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGCCATTGCCAGTCAGCTaGAGAAGGAAATGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: SVSVLFSRIHCSNCLTSGPLPVS*RRKCLL
Trigger: AAGCAAACATTTCCTTCTTCAGCTGACTGGCAATGG...CCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp CAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGACCATTGCCAGTCAGCTaGAGAAGGAAATGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: QLVYCFLEYTVQIVSLLGPLPVS*RRKCLL
Trigger: AAGCAAACATTTCCTTCTTCAGCTGACTGGCAATGG...TCCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp ATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTATGCTTTCATTTCGATTTAAAGTaGCCCCCATTAACACAAAGT +
Preference number: 4 (lower is better)
Translates to: IASVFTSQSSMLTIVLCFHFDLK*PPLTQS
Trigger: ACTTTGTGTTAATGGGGGGCACTTTAAATCGAAATG...AAAGCATAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp ATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTATGCTTTAGTACCTGTTCTAATTaGATCAGTGTTTACCTCTCA +
Preference number: 4 (lower is better)
Translates to: IASVFTSQSSMLTIVLCFSTCSN*ISVYLS
Trigger: TGAGAGGTAAACACTGATGCAATTAGAACAGGTACT...AAAGCATAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CCA 90 bp TCAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGACTGGGCTACCTCATTaGAAGTACCACCAGCAATTT +
Preference number: 4 (lower is better)
Translates to: SVSVLFSRIHCSNCLTSGTGLPH*KYHQQF
Trigger: AAATTGCTGGTGGTACTTCCAATGAGGTAGCCCAGT...CCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CCA 90 bp CAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGATCCTTGGAGAGAAACTaGGCTACCTCATTGGAAGTA +
Preference number: 4 (lower is better)
Translates to: QLVYCFLEYTVQIVSLLGSLERN*ATSLEV
Trigger: TACTTCCAATGAGGTAGCCCAGTTTCTCTCCAAGGA...TCCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CCA 90 bp TCAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGGGTAGAGTCCTGGCCTaGTCATTTGTGTGTATAAGT +
Preference number: 4 (lower is better)
Translates to: SVSVLFSRIHCSNCLTSGGRVLA*SFVCIS
Trigger: ACTTATACACACAAATGACCAGGCCAGGACTCTACC...CCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358397.9
ENST00000433389.8
ENST00000519505.5
CDS-3UTR CCA 90 bp GAGCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTAAGTTTTCTTGTGTCTaGAGGTTTCAAGATCACCAT +
Preference number: 4 (lower is better)
Translates to: ELWAALGILRHQVYRNFFKFSCV*RFQDHH
Trigger: ATGGTGATCTTGAAACCTCCAGACACAAGAAAACTT...AAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CCA 90 bp GCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTCAAGTTTTCTTGTGTCTaGAGGTTTCAAGATCACCAT +
Preference number: 4 (lower is better)
Translates to: ALGSFGHLKASSIQKFLFKFSCV*RFQDHH
Trigger: ATGGTGATCTTGAAACCTCCAGACACAAGAAAACTT...GAAAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CCA 90 bp GTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTAACATCTTTCAAACACTaGGATAGTACGCTGTGTAAT +
Preference number: 4 (lower is better)
Translates to: VLIASVFTSQSSMLTIVLTSFKH*DSTLCN
Trigger: ATTACACAGCGTACTATCCCAGTGTTTGAAAGATGT...TAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454170.7
ENST00000646773.1
CDS-3UTR TCA 90 bp AACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTTTGTCAATATCAGGTaGACCAGGGCAACATTTCTT +
Preference number: 4 (lower is better)
Translates to: NIVLNTDSISTCSNCISVFVNIR*TRATFL
Trigger: AAGAAATGTTGCCCTGGTTCACCTGATATTGACAAA...AACACTGATGCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp TCAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGCAAACACTTCTTTTCTaGGGATGTTCTAACTGCTGG +
Preference number: 4 (lower is better)
Translates to: SVSVLFSRIHCSNCLTSGQTLLF*GCSNCW
Trigger: CCAGCAGTTAGAACATCCTCAGAAAAGAAGTGTTTG...CCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358397.9
ENST00000433389.8
ENST00000519505.5
CDS-3UTR TCA 90 bp CAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGACTTAGGAAACACCTATaGTGCCACTTTAACTGGAAG +
Preference number: 4 (lower is better)
Translates to: QLVYCFLEYTVQIVSLLGLRKHL*CHFNWK
Trigger: CTTCCAGTTAAAGTGGCATCATAGGTGTTTCCTAAG...TCCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp CAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGACATAGTGTTAAACACTaGCAGCATCAGTACCTGTTC +
Preference number: 4 (lower is better)
Translates to: QLVYCFLEYTVQIVSLLGHSVKH*QHQYLF
Trigger: GAACAGGTACTGATGCTGTCAGTGTTTAACACTATG...TCCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp CAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGAATTCAGACAAAGTGCTaGACCTCCCTTGGCAATATT +
Preference number: 4 (lower is better)
Translates to: QLVYCFLEYTVQIVSLLGIQTKC*TSLGNI
Trigger: AATATTGCCAAGGGAGGTGCAGCACTTTGTCTGAAT...TCCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp TCAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGCCCAACAAGTCTTTATaGTTCCTCAACGCATTCTGT +
Preference number: 4 (lower is better)
Translates to: SVSVLFSRIHCSNCLTSGPNKSL*FLNAFC
Trigger: ACAGAATGCGTTGAGGAAGCATAAAGACTTGTTGGG...CCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp GTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTACTAACTACATGTAGCTaGTTCATTTTTCGTTTTGCA +
Preference number: 4 (lower is better)
Translates to: VLIASVFTSQSSMLTIVLLTTCS*FIFRFA
Trigger: TGCAAAACGAAAAATGAAGCAGCTACATGTAGTTAG...TAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp ACACAGCTAAACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCAGTACCTGTTCTAATTaGATCAGTGTTTACCTCTCA +
Preference number: 4 (lower is better)
Translates to: TQLNIVLNTDSISTCSNCSTCSN*ISVYLS
Trigger: TGAGAGGTAAACACTGATGCAATTAGAACAGGTACT...GCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTTTAGCTGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp AACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTAAATCTGCACGGCATTaGATTCAAGCAAAGGACAAT +
Preference number: 4 (lower is better)
Translates to: NIVLNTDSISTCSNCISVKSARH*IQAKDN
Trigger: ATTGTCCTTTGCTTGAATGCAATGCCGTGCAGATTT...AACACTGATGCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp GTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTACTTTTCGATCTTAAGTaGCAGTTATCACCAATTTTC +
Preference number: 4 (lower is better)
Translates to: VLIASVFTSQSSMLTIVLLFDLK*QLSPIF
Trigger: GAAAATTGGTGATAACTGGCACTTAAGATCGAAAAG...TAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR GCA 90 bp GCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTCCTTTTCGATCTTAAGTaGCAGTTATCACCAATTTTC +
Preference number: 4 (lower is better)
Translates to: ALGSFGHLKASSIQKFLFLFDLK*QLSPIF
Trigger: GAAAATTGGTGATAACTGGCACTTAAGATCGAAAAG...GAAAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CCA 90 bp AACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTAATACTCTGTCATTGTaGCAACGTCCAGTTTGTCAA +
Preference number: 4 (lower is better)
Translates to: NIVLNTDSISTCSNCISVNTLSL*QRPVCQ
Trigger: TTGACAAACTGGACGTTGCCACAATGACAGAGTATT...AACACTGATGCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp CAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGATTTGTCAATATCAGGTaGACCAGGGCAACATTTCTT +
Preference number: 4 (lower is better)
Translates to: QLVYCFLEYTVQIVSLLGFVNIR*TRATFL
Trigger: AAGAAATGTTGCCCTGGTTCACCTGATATTGACAAA...TCCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp AACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTCCATATCGAGAGACTaGACTACTCTTCTCAAAATT +
Preference number: 4 (lower is better)
Translates to: NIVLNTDSISTCSNCISVSISRD*TTLLKI
Trigger: AATTTTGAGAAGAGTAGTTCAGTCTCTCGATATGGA...AACACTGATGCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp TCAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGAATCTTGCAATATCTTaGTCTGAAGACTGCCATGGT +
Preference number: 4 (lower is better)
Translates to: SVSVLFSRIHCSNCLTSGNLAIS*SEDCHG
Trigger: ACCATGGCAGTCTTCAGATCAAGATATTGCAAGATT...CCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp AACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTCATTTCGATTTAAAGTaGCCCCCATTAACACAAAGT +
Preference number: 4 (lower is better)
Translates to: NIVLNTDSISTCSNCISVHFDLK*PPLTQS
Trigger: ACTTTGTGTTAATGGGGGGCACTTTAAATCGAAATG...AACACTGATGCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp AACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTAGTACCTGTTCTAATTaGATCAGTGTTTACCTCTCA +
Preference number: 4 (lower is better)
Translates to: NIVLNTDSISTCSNCISVSTCSN*ISVYLS
Trigger: TGAGAGGTAAACACTGATGCAATTAGAACAGGTACT...AACACTGATGCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp CAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGAAAATCTGCACGGCATTaGATTCAAGCAAAGGACAAT +
Preference number: 4 (lower is better)
Translates to: QLVYCFLEYTVQIVSLLGKSARH*IQAKDN
Trigger: ATTGTCCTTTGCTTGAATGCAATGCCGTGCAGATTT...TCCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp ACACAGCTAAACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCCTTTTCGATCTTAAGTaGCAGTTATCACCAATTTTC +
Preference number: 4 (lower is better)
Translates to: TQLNIVLNTDSISTCSNCLFDLK*QLSPIF
Trigger: GAAAATTGGTGATAACTGGCACTTAAGATCGAAAAG...GCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTTTAGCTGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CCA 90 bp CAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGAAATACTCTGTCATTGTaGCAACGTCCAGTTTGTCAA +
Preference number: 4 (lower is better)
Translates to: QLVYCFLEYTVQIVSLLGNTLSL*QRPVCQ
Trigger: TTGACAAACTGGACGTTGCCACAATGACAGAGTATT...TCCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp TCAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGTCCATATCGAGAGACTaGACTACTCTTCTCAAAATT +
Preference number: 4 (lower is better)
Translates to: SVSVLFSRIHCSNCLTSGSISRD*TTLLKI
Trigger: AATTTTGAGAAGAGTAGTTCAGTCTCTCGATATGGA...CCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR TCA 90 bp CAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGATCCATATCGAGAGACTaGACTACTCTTCTCAAAATT +
Preference number: 4 (lower is better)
Translates to: QLVYCFLEYTVQIVSLLGSISRD*TTLLKI
Trigger: AATTTTGAGAAGAGTAGTTCAGTCTCTCGATATGGA...TCCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp CAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGACATTTCGATTTAAAGTaGCCCCCATTAACACAAAGT +
Preference number: 4 (lower is better)
Translates to: QLVYCFLEYTVQIVSLLGHFDLK*PPLTQS
Trigger: ACTTTGTGTTAATGGGGGGCACTTTAAATCGAAATG...TCCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp TCAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGAGTACCTGTTCTAATTaGATCAGTGTTTACCTCTCA +
Preference number: 4 (lower is better)
Translates to: SVSVLFSRIHCSNCLTSGSTCSN*ISVYLS
Trigger: TGAGAGGTAAACACTGATGCAATTAGAACAGGTACT...CCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp AACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTCTTTTCGATCTTAAGTaGCAGTTATCACCAATTTTC +
Preference number: 4 (lower is better)
Translates to: NIVLNTDSISTCSNCISVLFDLK*QLSPIF
Trigger: GAAAATTGGTGATAACTGGCACTTAAGATCGAAAAG...AACACTGATGCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CCA 90 bp CAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGAAAGTTTTCTTGTGTCTaGAGGTTTCAAGATCACCAT +
Preference number: 4 (lower is better)
Translates to: QLVYCFLEYTVQIVSLLGKFSCV*RFQDHH
Trigger: ATGGTGATCTTGAAACCTCCAGACACAAGAAAACTT...TCCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CCA 90 bp TCAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGACTTTGTATGTTTTGTaGAGGGTGCACAATTTCTTC +
Preference number: 4 (lower is better)
Translates to: SVSVLFSRIHCSNCLTSGTLYVL*RVHNFF
Trigger: GAAGAAATTGTGCACCCTCCACAAAACATACAAAGT...CCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR GCA 90 bp TCAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGCTAACTACATGTAGCTaGTTCATTTTTCGTTTTGCA +
Preference number: 4 (lower is better)
Translates to: SVSVLFSRIHCSNCLTSGLTTCS*FIFRFA
Trigger: TGCAAAACGAAAAATGAAGCAGCTACATGTAGTTAG...CCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS TCA 90 bp CCCGACGGGCAAAGAACCCGGCTCGGTAGCGCCGGCCTCTCCACCTaGGCTAAGTTGCGGAGGACTGAAATGGCTCCAAGGCAGTTGGCC +
Preference number: 5 (lower is better)
Translates to: PDGQRTRLGSAGLST*AKLRRTEMAPRQLA
Trigger: GGCCAACTGCCTTGGAGCCATTTCAGTCCTCCGCAACTTAGCTCAGGTGGAGAGGCCGGCGCTACCGAGCCGGGTTCTTTGCCCGTCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520385.1
CDS CCA 90 bp AGTATTGTAGGCCAGGCCCTGCATTCTGACCACCGTGCCAGGCTGTaGAGGGACACCGCTAAGATTAGCAGCTGTAGGGAAGTAGCCAAG +
Preference number: 5 (lower is better)
Translates to: SIVGQALHSDHRARL*RDTAKISSCREVAK
Trigger: CTTGGCTACTTCCCTACAGCTGCTAATCTTAGCGGTGTCCCTCCACAGCCTGGCACGGTGGTCAGAATGCAGGGCCTGGCCTACAATACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000517610.1
CDS GCA 90 bp GAAGAGCTGAGTGCCTGCTGGGTAGTACGCTGTGGAGGGCTGCAGTaGTCGTGGATTCAAAATCACAGAGGGCTGGTAAATGGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: EELSACWVVRCGGLQ*SWIQNHRGLVNGSF
Trigger: GAAGCTGCCATTTACCAGCCCTCTGTGATTTTGAATCCACGAGCACTGCAGCCCTCCACAGCGTACTACCCAGCAGGCACTCAGCTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000517610.1
ENST00000519505.5
ENST00000646773.1
CDS CCA 90 bp CTGAGTGCCTGCTGGGTAGTACGCTGTGGAGGGCTGCAGTGCTCGTaGATTCAAAATCACAGAGGGCTGGTAAATGGCAGCTTCTGTAGG +
Preference number: 5 (lower is better)
Translates to: LSACWVVRCGGLQCS*IQNHRGLVNGSFCR
Trigger: CCTACAGAAGCTGCCATTTACCAGCCCTCTGTGATTTTGAATCCACGAGCACTGCAGCCCTCCACAGCGTACTACCCAGCAGGCACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000517610.1
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CAA 90 bp CTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTTGCTTCTCATCCGAGCCTAGCTaGGCCCCGGTGGCCCCAGCA +
Preference number: 5 (lower is better)
Translates to: LLQLKGHCQSAEEGNVCFSSEPS*APVAPA
Trigger: TGCTGGGGCCACCGGGGCCAAGCTAGGCTCGGATGA...GAAGCAAACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
CDS TCA 90 bp AGTCCATCCTCGGTTGCATACTGGGATAGTACGCTGTGTAATTCATaGAGAGCTGAGTGCCTGCTGGGTAGTACGCTGTGGAGGGCTGCA +
Preference number: 5 (lower is better)
Translates to: SPSSVAYWDSTLCNS*RAECLLGSTLWRAA
Trigger: TGCAGCCCTCCACAGCGTACTACCCAGCAGGCACTCAGCTCTTCATGAATTACACAGCGTACTATCCCAGTATGCAACCGAGGATGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519505.5
CDS-3UTR CAA 90 bp TTCTTCCTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTTCATCCGAGCCTAGCTaGGCCCCGGTGGCCCCAGCA +
Preference number: 5 (lower is better)
Translates to: FFLLQLKGHCQSAEEGNVSSEPS*APVAPA
Trigger: TGCTGGGGCCACCGGGGCCAAGCTAGGCTCGGATGA...AACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAGGAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
CDS CCA 90 bp CTGTGCATATTCCTCACAGGCAAAGAGGACAAAAGCGTCCCCTGTTaGCCTACCATCTGGGTAGGTGACAAAGAGGATGCCTTCCTTTCC +
Preference number: 5 (lower is better)
Translates to: LCIFLTGKEDKSVPC*PTIWVGDKEDAFLS
Trigger: GGAAAGGAAGGCATCCTCTTTGTCACCTACCCAGATGGTAGGCCAACAGGGGACGCTTTTGTCCTCTTTGCCTGTGAGGAATATGCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000517556.1
ENST00000517610.1
ENST00000519505.5
ENST00000646773.1
CDS CCA 90 bp GCTGGGATAGTACGCTGTGTAATTCATGAAGAGCTGAGTGCCTGCTaGGTAGTACGCTGTGGAGGGCTGCAGTGCTCGTGGATTCAAAAT +
Preference number: 5 (lower is better)
Translates to: AGIVRCVIHEELSAC*VVRCGGLQCSWIQN
Trigger: ATTTTGAATCCACGAGCACTGCAGCCCTCCACAGCGTACTACCCAGCAGGCACTCAGCTCTTCATGAATTACACAGCGTACTATCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000517610.1
CDS-3UTR CAA 90 bp GCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTCTCATCCGAGCCTAGCTaGGCCCCGGTGGCCCCAGCA +
Preference number: 5 (lower is better)
Translates to: ALGSFGHLKASSIQKFLFSSEPS*APVAPA
Trigger: TGCTGGGGCCACCGGGGCCAAGCTAGGCTCGGATGA...GAAAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
CDS-3UTR CAA 90 bp CTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTTGCTTCAAACTGTCGGAGGGCTaGGTCCAGCTGCGACGCCGA +
Preference number: 5 (lower is better)
Translates to: LLQLKGHCQSAEEGNVCFKLSEG*VQLRRR
Trigger: TCGGCGTCGCAGCTGGACCAAGCCCTCCGACAGTTT...GAAGCAAACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
CDS GCA 90 bp CAAAATCACAGAGGGCTGGTAAATGGCAGCTTCTGTAGGAATAACTaGAGCAGGAGCTGGAAATGTGTAGGAGGGAGGAGACAGGCATGG +
Preference number: 5 (lower is better)
Translates to: QNHRGLVNGSFCRNN*SRSWKCVGGRRQAW
Trigger: CCATGCCTGTCTCCTCCCTCCTACACATTTCCAGCTCCTGCTGCAGTTATTCCTACAGAAGCTGCCATTTACCAGCCCTCTGTGATTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000517610.1
ENST00000519505.5
ENST00000646773.1
CDS CCA 90 bp ACTGGGATAGTACGCTGTGTAATTCATGAAGAGCTGAGTGCCTGCTaGGTAGTACGCTGTGGAGGGCTGCAGTGCTCGTGGATTCAAAAT +
Preference number: 5 (lower is better)
Translates to: TGIVRCVIHEELSAC*VVRCGGLQCSWIQN
Trigger: ATTTTGAATCCACGAGCACTGCAGCCCTCCACAGCGTACTACCCAGCAGGCACTCAGCTCTTCATGAATTACACAGCGTACTATCCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CAA 90 bp ACACAGCTAAACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCTCATCCGAGCCTAGCTaGGCCCCGGTGGCCCCAGCA +
Preference number: 5 (lower is better)
Translates to: TQLNIVLNTDSISTCSNCSSEPS*APVAPA
Trigger: TGCTGGGGCCACCGGGGCCAAGCTAGGCTCGGATGA...GCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTTTAGCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000646773.1
CDS TCA 90 bp CACCATACATCTTTCAAACACTGGGATAGTACGCTGTGTAATTCATaGAGAGCTGAGTGCCTGCTGGGTAGTACGCTGTGGAGGGCTGCA +
Preference number: 5 (lower is better)
Translates to: HHTSFKHWDSTLCNS*RAECLLGSTLWRAA
Trigger: TGCAGCCCTCCACAGCGTACTACCCAGCAGGCACTCAGCTCTTCATGAATTACACAGCGTACTATCCCAGTGTTTGAAAGATGTATGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454170.7
ENST00000646773.1
CDS GCA 90 bp TGTGGCGAACTCCCCCAGGAAATCCAGGATGTCCTCAATTGTGGCTaGATAGGGAAGACCTCGAAGGCGTATACAGTCTCTAACATTTGT +
Preference number: 5 (lower is better)
Translates to: CGELPQEIQDVLNCG*IGKTSKAYTVSNIC
Trigger: ACAAATGTTAGAGACTGTATACGCCTTCGAGGTCTTCCCTATGCAGCCACAATTGAGGACATCCTGGATTTCCTGGGGGAGTTCGCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000517610.1
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CAA 90 bp GCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTCAAACTGTCGGAGGGCTaGGTCCAGCTGCGACGCCGA +
Preference number: 5 (lower is better)
Translates to: ALGSFGHLKASSIQKFLFKLSEG*VQLRRR
Trigger: TCGGCGTCGCAGCTGGACCAAGCCCTCCGACAGTTT...GAAAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
CDS-3UTR CAA 90 bp ATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTATGCTTTAAACTGTCGGAGGGCTaGGTCCAGCTGCGACGCCGA +
Preference number: 5 (lower is better)
Translates to: IASVFTSQSSMLTIVLCFKLSEG*VQLRRR
Trigger: TCGGCGTCGCAGCTGGACCAAGCCCTCCGACAGTTT...AAAGCATAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000646773.1
CDS-3UTR CAA 90 bp CCATGTGATGTTTGTGCCTCTGTAGTGCTAGGTCTCGGTGCTCCTCACTTACAAAGTGCTGCACCTCCCTaGGCAATATTGAGTCCTTTG +
Preference number: 5 (lower is better)
Translates to: PCDVCASVVLGLGAPHLQSAAPP*AILSPL
Trigger: CAAAGGACTCAATATTGCCAAGGGAGGTGCAGCACT...TTGTAAGTGAGGAGCACCGAGACCTAGCACTACAGAGGCACAAACATCACATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522756.6
CDS-3UTR CAA 90 bp TCGACCCTGAGCATTCAGACAAAGTGCTGCACCTCCCTTGGCAATATTGAGTCCGGATACACTCTGTCATaGTGGCAACGTCCAGTTTGT +
Preference number: 5 (lower is better)
Translates to: STLSIQTKCCTSLGNIESGYTLS*WQRPVC
Trigger: ACAAACTGGACGTTGCCACAATGACAGAGTGTATCC...GGACTCAATATTGCCAAGGGAGGTGCAGCACTTTGTCTGAATGCTCAGGGTCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522756.6
CDS GCA 90 bp GAGGAGACAGGCATGGCGGTGGGGATAAGCCATTTCGATTTAAAGTaGCCCCCATTAACACAAAGTTCATCTCCTCAGCTGAACACTGAA +
Preference number: 5 (lower is better)
Translates to: EETGMAVGISHFDLK*PPLTQSSSPQLNTE
Trigger: TTCAGTGTTCAGCTGAGGAGATGAACTTTGTGTTAATGGGGGGCACTTTAAATCGAAATGGCTTATCCCCACCGCCATGCCTGTCTCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000454170.7
CDS-3UTR CAA 90 bp CAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGATCATCCGAGCCTAGCTaGGCCCCGGTGGCCCCAGCA +
Preference number: 5 (lower is better)
Translates to: QLVYCFLEYTVQIVSLLGSSEPS*APVAPA
Trigger: TGCTGGGGCCACCGGGGCCAAGCTAGGCTCGGATGA...TCCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000646773.1
CDS-3UTR CAA 90 bp ACACAGCTAAACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCAAACTGTCGGAGGGCTaGGTCCAGCTGCGACGCCGA +
Preference number: 5 (lower is better)
Translates to: TQLNIVLNTDSISTCSNCKLSEG*VQLRRR
Trigger: TCGGCGTCGCAGCTGGACCAAGCCCTCCGACAGTTT...GCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTTTAGCTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000646773.1
CDS TCA 90 bp ACGTCTATTTTAGTTTCTTCTTTGCAGTCCTCCGTCAGTTCCAACTaGTCCGGTCTAACTAGCACTTCGTGCAACTGTCCCACCTCCGAA +
Preference number: 5 (lower is better)
Translates to: TSILVSSLQSSVSSN*SGLTSTSCNCPTSE
Trigger: TTCGGAGGTGGGACAGTTGCACGAAGTGCTAGTTAGACCGGATCAGTTGGAACTGACGGAGGACTGCAAAGAAGAAACTAAAATAGACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520385.1
CDS-3UTR CAA 90 bp CTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTTGCTTCTGTCCCACCTTCTTGTaGGCCAGATCCACGACTTTC +
Preference number: 5 (lower is better)
Translates to: LLQLKGHCQSAEEGNVCFCPTFL*ARSTTF
Trigger: GAAAGTCGTGGATCTGGCCAACAAGAAGGTGGGACA...GAAGCAAACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
CDS-3UTR CAA 90 bp CTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTTGCTTCAACTGTCCCACCTTCTaGTTGGCCAGATCCACGACT +
Preference number: 5 (lower is better)
Translates to: LLQLKGHCQSAEEGNVCFNCPTF*LARSTT
Trigger: AGTCGTGGATCTGGCCAACAAGAAGGTGGGACAGTT...GAAGCAAACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
CDS-3UTR CAA 90 bp GTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTACAAAAGCGTCCCCTGTaGGCCTACCATCTGGGTAGG +
Preference number: 5 (lower is better)
Translates to: VLIASVFTSQSSMLTIVLQKRPL*AYHLGR
Trigger: CCTACCCAGATGGTAGGCCAACAGGGGACGCTTTTG...TAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CAA 90 bp GCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTCCAAAAGCGTCCCCTGTaGGCCTACCATCTGGGTAGG +
Preference number: 5 (lower is better)
Translates to: ALGSFGHLKASSIQKFLFQKRPL*AYHLGR
Trigger: CCTACCCAGATGGTAGGCCAACAGGGGACGCTTTTG...GAAAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CAA 90 bp CTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTTGCTTCCCAGGATGTCCTCAATaGTGGCTGCATAGGGAAGAC +
Preference number: 5 (lower is better)
Translates to: LLQLKGHCQSAEEGNVCFPGCPQ*WLHRED
Trigger: GTCTTCCCTATGCAGCCACAATTGAGGACATCCTGG...GAAGCAAACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS TCA 90 bp ACGTCTATTTTAGTTTCTTCTTTGCAGTCCTCCGTCAGTTCCAACTaGTCCGGTCTAACTAGCACTTCGTGCAACTGTCCCACCTTCTTG +
Preference number: 5 (lower is better)
Translates to: TSILVSSLQSSVSSN*SGLTSTSCNCPTFL
Trigger: CAAGAAGGTGGGACAGTTGCACGAAGTGCTAGTTAGACCGGATCAGTTGGAACTGACGGAGGACTGCAAAGAAGAAACTAAAATAGACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000646773.1
CDS TCA 90 bp CGAAGGCGTATACAGTCTCTAACATTTGTAGGGGGCACAAATTGCTaGGGTAGTACTGGAATAATGGGAGGGGTTGGAAGTGGAATGAGA +
Preference number: 5 (lower is better)
Translates to: RRRIQSLTFVGGTNC*GSTGIMGGVGSGMR
Trigger: TCTCATTCCACTTCCAACCCCTCCCATTATTCCAGTACTACCTCAGCAATTTGTGCCCCCTACAAATGTTAGAGACTGTATACGCCTTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000517610.1
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CAA 90 bp ACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGTGTCCCACCTTCTTGTaGGCCAGATCCACGACTTTC +
Preference number: 5 (lower is better)
Translates to: TASVPVLIASVFTSQSSMCPTFL*ARSTTF
Trigger: GAAAGTCGTGGATCTGGCCAACAAGAAGGTGGGACA...CATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAACAGGTACTGATGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000646773.1
CDS-3UTR CAA 90 bp TCAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGAAACTGTCGGAGGGCTaGGTCCAGCTGCGACGCCGA +
Preference number: 5 (lower is better)
Translates to: SVSVLFSRIHCSNCLTSGKLSEG*VQLRRR
Trigger: TCGGCGTCGCAGCTGGACCAAGCCCTCCGACAGTTT...CCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000646773.1
CDS-3UTR CAA 90 bp GCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTCCTCAGGATGCAGGATTaGCCTGACATGAAGCTGCCC +
Preference number: 5 (lower is better)
Translates to: ALGSFGHLKASSIQKFLFLRMQD*PDMKLP
Trigger: GGGCAGCTTCATGTCAGGCAAATCCTGCATCCTGAG...GAAAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
CDS-3UTR CAA 90 bp GTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTACTCAGGATGCAGGATTaGCCTGACATGAAGCTGCCC +
Preference number: 5 (lower is better)
Translates to: VLIASVFTSQSSMLTIVLLRMQD*PDMKLP
Trigger: GGGCAGCTTCATGTCAGGCAAATCCTGCATCCTGAG...TAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000646773.1
CDS-3UTR CAA 90 bp ATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTATGCTTTCTCAGGATGCAGGATTaGCCTGACATGAAGCTGCCC +
Preference number: 5 (lower is better)
Translates to: IASVFTSQSSMLTIVLCFLRMQD*PDMKLP
Trigger: GGGCAGCTTCATGTCAGGCAAATCCTGCATCCTGAG...AAAGCATAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000646773.1
CDS-3UTR CAA 90 bp TCTGAAGACTGCCATGGTAAACCTCGTGCCCTGACTACGGTGTTATCATCAATAGTGGCAACGTCCAGTTaGTCAATATCAGGTGAACCA +
Preference number: 5 (lower is better)
Translates to: SEDCHGKPRALTTVLSSIVATSS*SISGEP
Trigger: TGGTTCACCTGATATTGACAAACTGGACGTTGCCAC...TATTGATGATAACACCGTAGTCAGGGCACGAGGTTTACCATGGCAGTCTTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522756.6
CDS-3UTR CAA 90 bp CCATGTGATGTTTGTGCCTCTGTAGTGCTAGGTCTCGGTGCTCCTCACTTACAACCTCCCTTGGCAATATaGAGTCCTTTGAAGAATCTT +
Preference number: 5 (lower is better)
Translates to: PCDVCASVVLGLGAPHLQPPLAI*SPLKNL
Trigger: AAGATTCTTCAAAGGACTCAATATTGCCAAGGGAGG...TTGTAAGTGAGGAGCACCGAGACCTAGCACTACAGAGGCACAAACATCACATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522756.6
CDS-3UTR CAA 90 bp AGCTTCTCCGTTCCTTCGACCCTGAGCATTCAGACAAAGTGCTGCACCTCCCTTGGAAATCTTCACCTGTaGCTTTGTAAACCTCAATAT +
Preference number: 5 (lower is better)
Translates to: SFSVPSTLSIQTKCCTSLGNLHL*LCKPQY
Trigger: ATATTGAGGTTTACAAAGCAACAGGTGAAGATTTCC...AAGGGAGGTGCAGCACTTTGTCTGAATGCTCAGGGTCGAAGGAACGGAGAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522756.6
CDS-3UTR CAA 90 bp ACACAGCTAAACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCCAAAAGCGTCCCCTGTaGGCCTACCATCTGGGTAGG +
Preference number: 5 (lower is better)
Translates to: TQLNIVLNTDSISTCSNCQKRPL*AYHLGR
Trigger: CCTACCCAGATGGTAGGCCAACAGGGGACGCTTTTG...GCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTTTAGCTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CAA 90 bp GTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTATGTCCCACCTTCTTGTaGGCCAGATCCACGACTTTC +
Preference number: 5 (lower is better)
Translates to: VLIASVFTSQSSMLTIVLCPTFL*ARSTTF
Trigger: GAAAGTCGTGGATCTGGCCAACAAGAAGGTGGGACA...TAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000646773.1
CDS-3UTR CAA 90 bp GAGCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTGTCCCACCTTCTTGTaGGCCAGATCCACGACTTTC +
Preference number: 5 (lower is better)
Translates to: ELWAALGILRHQVYRNFFCPTFL*ARSTTF
Trigger: GAAAGTCGTGGATCTGGCCAACAAGAAGGTGGGACA...AAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
CDS-3UTR CAA 90 bp GCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTCTGTCCCACCTTCTTGTaGGCCAGATCCACGACTTTC +
Preference number: 5 (lower is better)
Translates to: ALGSFGHLKASSIQKFLFCPTFL*ARSTTF
Trigger: GAAAGTCGTGGATCTGGCCAACAAGAAGGTGGGACA...GAAAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
CDS-3UTR CAA 90 bp GCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTCAACTGTCCCACCTTCTaGTTGGCCAGATCCACGACT +
Preference number: 5 (lower is better)
Translates to: ALGSFGHLKASSIQKFLFNCPTF*LARSTT
Trigger: AGTCGTGGATCTGGCCAACAAGAAGGTGGGACAGTT...GAAAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
CDS-3UTR CAA 90 bp GTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTAAACTGTCCCACCTTCTaGTTGGCCAGATCCACGACT +
Preference number: 5 (lower is better)
Translates to: VLIASVFTSQSSMLTIVLNCPTF*LARSTT
Trigger: AGTCGTGGATCTGGCCAACAAGAAGGTGGGACAGTT...TAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000646773.1
CDS-3UTR CAA 90 bp ACACAGCTAAACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCCTCAGGATGCAGGATTaGCCTGACATGAAGCTGCCC +
Preference number: 5 (lower is better)
Translates to: TQLNIVLNTDSISTCSNCLRMQD*PDMKLP
Trigger: GGGCAGCTTCATGTCAGGCAAATCCTGCATCCTGAG...GCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTTTAGCTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000646773.1
CDS-3UTR CAA 90 bp CCATGTGATGTTTGTGCCTCTGTAGTGCTAGGTCTCGGTGCTCCTCACTTACAACCAGGGCAACATTTCTaGAATTCTTTTCGAAGATCA +
Preference number: 5 (lower is better)
Translates to: PCDVCASVVLGLGAPHLQPGQHF*NSFRRS
Trigger: TGATCTTCGAAAAGAATTCAAGAAATGTTGCCCTGG...TTGTAAGTGAGGAGCACCGAGACCTAGCACTACAGAGGCACAAACATCACATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522756.6
CDS-3UTR CAA 90 bp CTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTTGCTTCGTGGCAACGTCCAGTTaGTCAATATCAGGTGAACCA +
Preference number: 5 (lower is better)
Translates to: LLQLKGHCQSAEEGNVCFVATSS*SISGEP
Trigger: TGGTTCACCTGATATTGACAAACTGGACGTTGCCAC...GAAGCAAACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CAA 90 bp CTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTTGCTTCCCCCATATCTTCAACTaGAGAGGCTCCATATCGAGA +
Preference number: 5 (lower is better)
Translates to: LLQLKGHCQSAEEGNVCFPHIFN*RGSISR
Trigger: TCTCGATATGGAGCCTCTCAAGTTGAAGATATGGGG...GAAGCAAACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CAA 90 bp ACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGAGTGCTGCACCTCCCTaGGCAATATTGAGTCCTTTG +
Preference number: 5 (lower is better)
Translates to: TASVPVLIASVFTSQSSMSAAPP*AILSPL
Trigger: CAAAGGACTCAATATTGCCAAGGGAGGTGCAGCACT...CATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAACAGGTACTGATGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CAA 90 bp TTCTTCCTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTAGTGCTGCACCTCCCTaGGCAATATTGAGTCCTTTG +
Preference number: 5 (lower is better)
Translates to: FFLLQLKGHCQSAEEGNVSAAPP*AILSPL
Trigger: CAAAGGACTCAATATTGCCAAGGGAGGTGCAGCACT...AACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAGGAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CAA 90 bp AACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTCAAAAGCGTCCCCTGTaGGCCTACCATCTGGGTAGG +
Preference number: 5 (lower is better)
Translates to: NIVLNTDSISTCSNCISVQKRPL*AYHLGR
Trigger: CCTACCCAGATGGTAGGCCAACAGGGGACGCTTTTG...AACACTGATGCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CAA 90 bp GCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTCCCAGGATGTCCTCAATaGTGGCTGCATAGGGAAGAC +
Preference number: 5 (lower is better)
Translates to: ALGSFGHLKASSIQKFLFPGCPQ*WLHRED
Trigger: GTCTTCCCTATGCAGCCACAATTGAGGACATCCTGG...GAAAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CAA 90 bp TTCTTCCTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTATACAAACCCATTCTTaGGGTAGAGTCCTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: FFLLQLKGHCQSAEEGNVIQTHS*GRVLAW
Trigger: CCAGGCCAGGACTCTACCCAAAGAATGGGTTTGTAT...AACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAGGAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358397.9
ENST00000433389.8
ENST00000519505.5
CDS-3UTR CAA 90 bp ACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGATACAAACCCATTCTTaGGGTAGAGTCCTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: TASVPVLIASVFTSQSSMIQTHS*GRVLAW
Trigger: CCAGGCCAGGACTCTACCCAAAGAATGGGTTTGTAT...CATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAACAGGTACTGATGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358397.9
ENST00000433389.8
ENST00000519505.5
CDS-3UTR CAA 90 bp ACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGGAGCTTTGGGCAGCTTaGGGCATCTTAAGGCATCAA +
Preference number: 5 (lower is better)
Translates to: TASVPVLIASVFTSQSSMELWAA*GILRHQ
Trigger: TTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGCTC...CATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAACAGGTACTGATGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS GCA 90 bp ATGGTAACTTACATGGCGGTGGGGATAAGCCATTTCGATTTAAAGTaGCCCCCATTAACACAAAGTTCATCTCCTCAGCTGAACACTGAA +
Preference number: 5 (lower is better)
Translates to: MVTYMAVGISHFDLK*PPLTQSSSPQLNTE
Trigger: TTCAGTGTTCAGCTGAGGAGATGAACTTTGTGTTAATGGGGGGCACTTTAAATCGAAATGGCTTATCCCCACCGCCATGTAAGTTACCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000433389.8
ENST00000517610.1
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CAA 90 bp TTCTTCCTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTCCCCATATCTTCAACTaGAGAGGCTCCATATCGAGA +
Preference number: 5 (lower is better)
Translates to: FFLLQLKGHCQSAEEGNVPHIFN*RGSISR
Trigger: TCTCGATATGGAGCCTCTCAAGTTGAAGATATGGGG...AACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAGGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CAA 90 bp ACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCCCCATATCTTCAACTaGAGAGGCTCCATATCGAGA +
Preference number: 5 (lower is better)
Translates to: TASVPVLIASVFTSQSSMPHIFN*RGSISR
Trigger: TCTCGATATGGAGCCTCTCAAGTTGAAGATATGGGG...CATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAACAGGTACTGATGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CAA 90 bp GCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTCAGTGCTGCACCTCCCTaGGCAATATTGAGTCCTTTG +
Preference number: 5 (lower is better)
Translates to: ALGSFGHLKASSIQKFLFSAAPP*AILSPL
Trigger: CAAAGGACTCAATATTGCCAAGGGAGGTGCAGCACT...GAAAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CAA 90 bp ACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGAACTGGGCTACCTCATaGGAAGTACCACCAGCAATT +
Preference number: 5 (lower is better)
Translates to: TASVPVLIASVFTSQSSMNWATS*EVPPAI
Trigger: AATTGCTGGTGGTACTTCCAATGAGGTAGCCCAGTT...CATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAACAGGTACTGATGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CAA 90 bp GAGCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTATACAAACCCATTCTTaGGGTAGAGTCCTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: ELWAALGILRHQVYRNFFIQTHS*GRVLAW
Trigger: CCAGGCCAGGACTCTACCCAAAGAATGGGTTTGTAT...AAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358397.9
ENST00000433389.8
ENST00000519505.5
CDS-3UTR CAA 90 bp ATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTATGCTTTGAGCTTTGGGCAGCTTaGGGCATCTTAAGGCATCAA +
Preference number: 5 (lower is better)
Translates to: IASVFTSQSSMLTIVLCFELWAA*GILRHQ
Trigger: TTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGCTC...AAAGCATAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CAA 90 bp GTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTAGAGCTTTGGGCAGCTTaGGGCATCTTAAGGCATCAA +
Preference number: 5 (lower is better)
Translates to: VLIASVFTSQSSMLTIVLELWAA*GILRHQ
Trigger: TTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGCTC...TAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CAA 90 bp ACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGAAGTCTTTCAGAGCTTaGGGCAGCTTTGGGCATCTT +
Preference number: 5 (lower is better)
Translates to: TASVPVLIASVFTSQSSMKSFRA*GSFGHL
Trigger: AAGATGCCCAAAGCTGCCCAAAGCTCTGAAAGACTT...CATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAACAGGTACTGATGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CAA 90 bp TCAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGCTCAGGATGCAGGATTaGCCTGACATGAAGCTGCCC +
Preference number: 5 (lower is better)
Translates to: SVSVLFSRIHCSNCLTSGLRMQD*PDMKLP
Trigger: GGGCAGCTTCATGTCAGGCAAATCCTGCATCCTGAG...CCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000646773.1
CDS-3UTR CAA 90 bp TTCTTCCTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTAATAGTACATTCTTCTaGGAAGCCTCAGGATGCAGG +
Preference number: 5 (lower is better)
Translates to: FFLLQLKGHCQSAEEGNVNSTFF*EASGCR
Trigger: CCTGCATCCTGAGGCTTCCAAGAAGAATGTACTATT...AACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAGGAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
CDS-3UTR CAA 90 bp GAGCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTGTGGCAACGTCCAGTTaGTCAATATCAGGTGAACCA +
Preference number: 5 (lower is better)
Translates to: ELWAALGILRHQVYRNFFVATSS*SISGEP
Trigger: TGGTTCACCTGATATTGACAAACTGGACGTTGCCAC...AAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CAA 90 bp GCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTCGTGGCAACGTCCAGTTaGTCAATATCAGGTGAACCA +
Preference number: 5 (lower is better)
Translates to: ALGSFGHLKASSIQKFLFVATSS*SISGEP
Trigger: TGGTTCACCTGATATTGACAAACTGGACGTTGCCAC...GAAAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CAA 90 bp ATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTATGCTTTGTGGCAACGTCCAGTTaGTCAATATCAGGTGAACCA +
Preference number: 5 (lower is better)
Translates to: IASVFTSQSSMLTIVLCFVATSS*SISGEP
Trigger: TGGTTCACCTGATATTGACAAACTGGACGTTGCCAC...AAAGCATAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CAA 90 bp ATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTATGCTTTCCCCATATCTTCAACTaGAGAGGCTCCATATCGAGA +
Preference number: 5 (lower is better)
Translates to: IASVFTSQSSMLTIVLCFPHIFN*RGSISR
Trigger: TCTCGATATGGAGCCTCTCAAGTTGAAGATATGGGG...AAAGCATAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CAA 90 bp GAGCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTCCCCATATCTTCAACTaGAGAGGCTCCATATCGAGA +
Preference number: 5 (lower is better)
Translates to: ELWAALGILRHQVYRNFFPHIFN*RGSISR
Trigger: TCTCGATATGGAGCCTCTCAAGTTGAAGATATGGGG...AAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CAA 90 bp GTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTACCCCATATCTTCAACTaGAGAGGCTCCATATCGAGA +
Preference number: 5 (lower is better)
Translates to: VLIASVFTSQSSMLTIVLPHIFN*RGSISR
Trigger: TCTCGATATGGAGCCTCTCAAGTTGAAGATATGGGG...TAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CAA 90 bp CGTGCCCTGACTACGGTGTTATCATCAATAAGTTCCATCTTGCTGCAAGTTCCATCAATAAGTTCCATCTaGCTGCAAGTTCCACTTTCA +
Preference number: 5 (lower is better)
Translates to: RALTTVLSSISSILLQVPSISSI*LQVPLS
Trigger: TGAAAGTGGAACTTGCAGCAAGATGGAACTTATTGA...TGGAACTTGCAGCAAGATGGAACTTATTGATGATAACACCGTAGTCAGGGCACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522756.6
CDS-3UTR CAA 90 bp GAGCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTAACTGGGCTACCTCATaGGAAGTACCACCAGCAATT +
Preference number: 5 (lower is better)
Translates to: ELWAALGILRHQVYRNFFNWATS*EVPPAI
Trigger: AATTGCTGGTGGTACTTCCAATGAGGTAGCCCAGTT...AAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CAA 90 bp ATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTATGCTTTAACTGGGCTACCTCATaGGAAGTACCACCAGCAATT +
Preference number: 5 (lower is better)
Translates to: IASVFTSQSSMLTIVLCFNWATS*EVPPAI
Trigger: AATTGCTGGTGGTACTTCCAATGAGGTAGCCCAGTT...AAAGCATAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CAA 90 bp ACACAGCTAAACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCGAGCTTTGGGCAGCTTaGGGCATCTTAAGGCATCAA +
Preference number: 5 (lower is better)
Translates to: TQLNIVLNTDSISTCSNCELWAA*GILRHQ
Trigger: TTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGCTC...GCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTTTAGCTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CAA 90 bp GTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTAAAGTCTTTCAGAGCTTaGGGCAGCTTTGGGCATCTT +
Preference number: 5 (lower is better)
Translates to: VLIASVFTSQSSMLTIVLKSFRA*GSFGHL
Trigger: AAGATGCCCAAAGCTGCCCAAAGCTCTGAAAGACTT...TAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CAA 90 bp GCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTCAAGTCTTTCAGAGCTTaGGGCAGCTTTGGGCATCTT +
Preference number: 5 (lower is better)
Translates to: ALGSFGHLKASSIQKFLFKSFRA*GSFGHL
Trigger: AAGATGCCCAAAGCTGCCCAAAGCTCTGAAAGACTT...GAAAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CAA 90 bp TCAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGAACTGTCCCACCTTCTaGTTGGCCAGATCCACGACT +
Preference number: 5 (lower is better)
Translates to: SVSVLFSRIHCSNCLTSGNCPTF*LARSTT
Trigger: AGTCGTGGATCTGGCCAACAAGAAGGTGGGACAGTT...CCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000646773.1
CDS-3UTR CAA 90 bp GAGCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTAATAGTACATTCTTCTaGGAAGCCTCAGGATGCAGG +
Preference number: 5 (lower is better)
Translates to: ELWAALGILRHQVYRNFFNSTFF*EASGCR
Trigger: CCTGCATCCTGAGGCTTCCAAGAAGAATGTACTATT...AAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
CDS-3UTR CAA 90 bp CTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTTGCTTCCCAGGGCAACATTTCTaGAATTCTTTTCGAAGATCA +
Preference number: 5 (lower is better)
Translates to: LLQLKGHCQSAEEGNVCFPGQHF*NSFRRS
Trigger: TGATCTTCGAAAAGAATTCAAGAAATGTTGCCCTGG...GAAGCAAACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CAA 90 bp ACACAGCTAAACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCGTGGCAACGTCCAGTTaGTCAATATCAGGTGAACCA +
Preference number: 5 (lower is better)
Translates to: TQLNIVLNTDSISTCSNCVATSS*SISGEP
Trigger: TGGTTCACCTGATATTGACAAACTGGACGTTGCCAC...GCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTTTAGCTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CAA 90 bp TCAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGCCAGGATGTCCTCAATaGTGGCTGCATAGGGAAGAC +
Preference number: 5 (lower is better)
Translates to: SVSVLFSRIHCSNCLTSGPGCPQ*WLHRED
Trigger: GTCTTCCCTATGCAGCCACAATTGAGGACATCCTGG...CCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CAA 90 bp CAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGACCAGGATGTCCTCAATaGTGGCTGCATAGGGAAGAC +
Preference number: 5 (lower is better)
Translates to: QLVYCFLEYTVQIVSLLGPGCPQ*WLHRED
Trigger: GTCTTCCCTATGCAGCCACAATTGAGGACATCCTGG...TCCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CAA 90 bp ACACAGCTAAACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCAATAGTACATTCTTCTaGGAAGCCTCAGGATGCAGG +
Preference number: 5 (lower is better)
Translates to: TQLNIVLNTDSISTCSNCNSTFF*EASGCR
Trigger: CCTGCATCCTGAGGCTTCCAAGAAGAATGTACTATT...GCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTTTAGCTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000646773.1
CDS-3UTR CAA 90 bp ACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCCAGGGCAACATTTCTaGAATTCTTTTCGAAGATCA +
Preference number: 5 (lower is better)
Translates to: TASVPVLIASVFTSQSSMPGQHF*NSFRRS
Trigger: TGATCTTCGAAAAGAATTCAAGAAATGTTGCCCTGG...CATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAACAGGTACTGATGCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CAA 90 bp AACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTGTGGCAACGTCCAGTTaGTCAATATCAGGTGAACCA +
Preference number: 5 (lower is better)
Translates to: NIVLNTDSISTCSNCISVVATSS*SISGEP
Trigger: TGGTTCACCTGATATTGACAAACTGGACGTTGCCAC...AACACTGATGCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CAA 90 bp ACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGTTAAATACTCTGTCATaGTGGCAACGTCCAGTTTGT +
Preference number: 5 (lower is better)
Translates to: TASVPVLIASVFTSQSSMLNTLS*WQRPVC
Trigger: ACAAACTGGACGTTGCCACAATGACAGAGTATTTAA...CATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAACAGGTACTGATGCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CAA 90 bp GTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTACCTCCCTTGGCAATATaGAGTCCTTTGAAGAATCTT +
Preference number: 5 (lower is better)
Translates to: VLIASVFTSQSSMLTIVLPPLAI*SPLKNL
Trigger: AAGATTCTTCAAAGGACTCAATATTGCCAAGGGAGG...TAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CAA 90 bp GCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTCCCTCCCTTGGCAATATaGAGTCCTTTGAAGAATCTT +
Preference number: 5 (lower is better)
Translates to: ALGSFGHLKASSIQKFLFPPLAI*SPLKNL
Trigger: AAGATTCTTCAAAGGACTCAATATTGCCAAGGGAGG...GAAAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CAA 90 bp GAGCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTCCTCCCTTGGCAATATaGAGTCCTTTGAAGAATCTT +
Preference number: 5 (lower is better)
Translates to: ELWAALGILRHQVYRNFFPPLAI*SPLKNL
Trigger: AAGATTCTTCAAAGGACTCAATATTGCCAAGGGAGG...AAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CAA 90 bp ATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTATGCTTTCCTCCCTTGGCAATATaGAGTCCTTTGAAGAATCTT +
Preference number: 5 (lower is better)
Translates to: IASVFTSQSSMLTIVLCFPPLAI*SPLKNL
Trigger: AAGATTCTTCAAAGGACTCAATATTGCCAAGGGAGG...AAAGCATAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CAA 90 bp TCAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGAGTGCTGCACCTCCCTaGGCAATATTGAGTCCTTTG +
Preference number: 5 (lower is better)
Translates to: SVSVLFSRIHCSNCLTSGSAAPP*AILSPL
Trigger: CAAAGGACTCAATATTGCCAAGGGAGGTGCAGCACT...CCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CAA 90 bp CTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTTGCTTCGGAAATCTTCACCTGTaGCTTTGTAAACCTCAATAT +
Preference number: 5 (lower is better)
Translates to: LLQLKGHCQSAEEGNVCFGNLHL*LCKPQY
Trigger: ATATTGAGGTTTACAAAGCAACAGGTGAAGATTTCC...GAAGCAAACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CAA 90 bp AACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTAACTGGGCTACCTCATaGGAAGTACCACCAGCAATT +
Preference number: 5 (lower is better)
Translates to: NIVLNTDSISTCSNCISVNWATS*EVPPAI
Trigger: AATTGCTGGTGGTACTTCCAATGAGGTAGCCCAGTT...AACACTGATGCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CAA 90 bp ACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGTTGCTAGAAGTTTTCTaGTGTCTGGAGGTTTCAAGA +
Preference number: 5 (lower is better)
Translates to: TASVPVLIASVFTSQSSMLLEVF*CLEVSR
Trigger: TCTTGAAACCTCCAGACACAAGAAAACTTCTAGCAA...CATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAACAGGTACTGATGCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CAA 90 bp CAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGAGAGCTTTGGGCAGCTTaGGGCATCTTAAGGCATCAA +
Preference number: 5 (lower is better)
Translates to: QLVYCFLEYTVQIVSLLGELWAA*GILRHQ
Trigger: TTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGCTC...TCCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CAA 90 bp ATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTATGCTTTTTAAATACTCTGTCATaGTGGCAACGTCCAGTTTGT +
Preference number: 5 (lower is better)
Translates to: IASVFTSQSSMLTIVLCFLNTLS*WQRPVC
Trigger: ACAAACTGGACGTTGCCACAATGACAGAGTATTTAA...AAAGCATAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CAA 90 bp GAGCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTTAAATACTCTGTCATaGTGGCAACGTCCAGTTTGT +
Preference number: 5 (lower is better)
Translates to: ELWAALGILRHQVYRNFFLNTLS*WQRPVC
Trigger: ACAAACTGGACGTTGCCACAATGACAGAGTATTTAA...AAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CAA 90 bp GCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTCTCAATAAGTTCCATCTaGCTGCAAGTTCCACTTTCA +
Preference number: 5 (lower is better)
Translates to: ALGSFGHLKASSIQKFLFSISSI*LQVPLS
Trigger: TGAAAGTGGAACTTGCAGCAAGATGGAACTTATTGA...GAAAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CAA 90 bp ATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTATGCTTTTCAATAAGTTCCATCTaGCTGCAAGTTCCACTTTCA +
Preference number: 5 (lower is better)
Translates to: IASVFTSQSSMLTIVLCFSISSI*LQVPLS
Trigger: TGAAAGTGGAACTTGCAGCAAGATGGAACTTATTGA...AAAGCATAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CAA 90 bp ACACAGCTAAACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCCCTCCCTTGGCAATATaGAGTCCTTTGAAGAATCTT +
Preference number: 5 (lower is better)
Translates to: TQLNIVLNTDSISTCSNCPPLAI*SPLKNL
Trigger: AAGATTCTTCAAAGGACTCAATATTGCCAAGGGAGG...GCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTTTAGCTGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CAA 90 bp ACAGCATCAGTACCTGTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGGGAAATCTTCACCTGTaGCTTTGTAAACCTCAATAT +
Preference number: 5 (lower is better)
Translates to: TASVPVLIASVFTSQSSMGNLHL*LCKPQY
Trigger: ATATTGAGGTTTACAAAGCAACAGGTGAAGATTTCC...CATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAACAGGTACTGATGCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CAA 90 bp TCAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGAACTGGGCTACCTCATaGGAAGTACCACCAGCAATT +
Preference number: 5 (lower is better)
Translates to: SVSVLFSRIHCSNCLTSGNWATS*EVPPAI
Trigger: AATTGCTGGTGGTACTTCCAATGAGGTAGCCCAGTT...CCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CAA 90 bp GCTTTGGGCAGCTTTGGGCATCTTAAGGCATCAAGTATACAGAAATTTCTTTTCTTGCTAGAAGTTTTCTaGTGTCTGGAGGTTTCAAGA +
Preference number: 5 (lower is better)
Translates to: ALGSFGHLKASSIQKFLFLLEVF*CLEVSR
Trigger: TCTTGAAACCTCCAGACACAAGAAAACTTCTAGCAA...GAAAAGAAATTTCTGTATACTTGATGCCTTAAGATGCCCAAAGCTGCCCAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CAA 90 bp GTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTATTGCTAGAAGTTTTCTaGTGTCTGGAGGTTTCAAGA +
Preference number: 5 (lower is better)
Translates to: VLIASVFTSQSSMLTIVLLLEVF*CLEVSR
Trigger: TCTTGAAACCTCCAGACACAAGAAAACTTCTAGCAA...TAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CAA 90 bp TTCTTCCTATTGCAGTTAAAGGGCCATTGCCAGTCAGCTGAAGAAGGAAATGTTAAACTTCCCCTGAATTaGCTAGAAGTTTTCTTGTGT +
Preference number: 5 (lower is better)
Translates to: FFLLQLKGHCQSAEEGNVKLPLN*LEVFLC
Trigger: ACACAAGAAAACTTCTAGCAAATTCAGGGGAAGTTT...AACATTTCCTTCTTCAGCTGACTGGCAATGGCCCTTTAACTGCAATAGGAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
CDS-3UTR CAA 90 bp GTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTAGCTGTAAGTTACGATTaGGCTTCACTAGCTCAAATT +
Preference number: 5 (lower is better)
Translates to: VLIASVFTSQSSMLTIVLAVSYD*ASLAQI
Trigger: AATTTGAGCTAGTGAAGCCAAATCGTAACTTACAGC...TAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CAA 90 bp TCAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGAATAGTACATTCTTCTaGGAAGCCTCAGGATGCAGG +
Preference number: 5 (lower is better)
Translates to: SVSVLFSRIHCSNCLTSGNSTFF*EASGCR
Trigger: CCTGCATCCTGAGGCTTCCAAGAAGAATGTACTATT...CCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000646773.1
CDS-3UTR CAA 90 bp ACACAGCTAAACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCTTAAATACTCTGTCATaGTGGCAACGTCCAGTTTGT +
Preference number: 5 (lower is better)
Translates to: TQLNIVLNTDSISTCSNCLNTLS*WQRPVC
Trigger: ACAAACTGGACGTTGCCACAATGACAGAGTATTTAA...GCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTTTAGCTGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CAA 90 bp ACACAGCTAAACATAGTGTTAAACACTGACAGCATCAGTACCTGTTCTAATTGCTCAATAAGTTCCATCTaGCTGCAAGTTCCACTTTCA +
Preference number: 5 (lower is better)
Translates to: TQLNIVLNTDSISTCSNCSISSI*LQVPLS
Trigger: TGAAAGTGGAACTTGCAGCAAGATGGAACTTATTGA...GCAATTAGAACAGGTACTGATGCTGTCAGTGTTTAACACTATGTTTAGCTGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CAA 90 bp GTTCTAATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTAAAACTTCCCCTGAATTaGCTAGAAGTTTTCTTGTGT +
Preference number: 5 (lower is better)
Translates to: VLIASVFTSQSSMLTIVLKLPLN*LEVFLC
Trigger: ACACAAGAAAACTTCTAGCAAATTCAGGGGAAGTTT...TAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAATTAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CAA 90 bp ATTGCATCAGTGTTTACCTCTCAGTCTAGCATGCTGACTATAGTCCTATGCTTTAAACTTCCCCTGAATTaGCTAGAAGTTTTCTTGTGT +
Preference number: 5 (lower is better)
Translates to: IASVFTSQSSMLTIVLCFKLPLN*LEVFLC
Trigger: ACACAAGAAAACTTCTAGCAAATTCAGGGGAAGTTT...AAAGCATAGGACTATAGTCAGCATGCTAGACTGAGAGGTAAACACTGATGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CAA 90 bp CAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGACCTCCCTTGGCAATATaGAGTCCTTTGAAGAATCTT +
Preference number: 5 (lower is better)
Translates to: QLVYCFLEYTVQIVSLLGPPLAI*SPLKNL
Trigger: AAGATTCTTCAAAGGACTCAATATTGCCAAGGGAGG...TCCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CAA 90 bp TCAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGCCAGGGCAACATTTCTaGAATTCTTTTCGAAGATCA +
Preference number: 5 (lower is better)
Translates to: SVSVLFSRIHCSNCLTSGPGQHF*NSFRRS
Trigger: TGATCTTCGAAAAGAATTCAAGAAATGTTGCCCTGG...CCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CAA 90 bp CAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGACCAGGGCAACATTTCTaGAATTCTTTTCGAAGATCA +
Preference number: 5 (lower is better)
Translates to: QLVYCFLEYTVQIVSLLGPGQHF*NSFRRS
Trigger: TGATCTTCGAAAAGAATTCAAGAAATGTTGCCCTGG...TCCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CAA 90 bp CAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGATTAAATACTCTGTCATaGTGGCAACGTCCAGTTTGT +
Preference number: 5 (lower is better)
Translates to: QLVYCFLEYTVQIVSLLGLNTLS*WQRPVC
Trigger: ACAAACTGGACGTTGCCACAATGACAGAGTATTTAA...TCCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CAA 90 bp CAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGATCAATAAGTTCCATCTaGCTGCAAGTTCCACTTTCA +
Preference number: 5 (lower is better)
Translates to: QLVYCFLEYTVQIVSLLGSISSI*LQVPLS
Trigger: TGAAAGTGGAACTTGCAGCAAGATGGAACTTATTGA...TCCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CAA 90 bp TCAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGTTGCTAGAAGTTTTCTaGTGTCTGGAGGTTTCAAGA +
Preference number: 5 (lower is better)
Translates to: SVSVLFSRIHCSNCLTSGLLEVF*CLEVSR
Trigger: TCTTGAAACCTCCAGACACAAGAAAACTTCTAGCAA...CCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CAA 90 bp CAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGAGCTGTAAGTTACGATTaGGCTTCACTAGCTCAAATT +
Preference number: 5 (lower is better)
Translates to: QLVYCFLEYTVQIVSLLGAVSYD*ASLAQI
Trigger: AATTTGAGCTAGTGAAGCCAAATCGTAACTTACAGC...TCCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CAA 90 bp TCAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGGCTGTAAGTTACGATTaGGCTTCACTAGCTCAAATT +
Preference number: 5 (lower is better)
Translates to: SVSVLFSRIHCSNCLTSGAVSYD*ASLAQI
Trigger: AATTTGAGCTAGTGAAGCCAAATCGTAACTTACAGC...CCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS-3UTR CAA 90 bp CAGTTAGTGTATTGTTTTCTAGAATACACTGTTCAAATTGTCTCACTTCTGGGAGGAAATCTTCACCTGTaGCTTTGTAAACCTCAATAT +
Preference number: 5 (lower is better)
Translates to: QLVYCFLEYTVQIVSLLGGNLHL*LCKPQY
Trigger: ATATTGAGGTTTACAAAGCAACAGGTGAAGATTTCC...TCCCAGAAGTGAGACAATTTGAACAGTGTATTCTAGAAAACAATACACTAACTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000646773.1
CDS GCA 72 bp GGCTCGGTAGCGCCGGCCTCTCCACCTGAGCTAAGTTaGGGAGGACTGAAATGGCTCCAAGGCAGTTGGCCA +
Preference number: 6 (lower is better)
Translates to: GSVAPASPPELS*GGLKWLQGSWP
Trigger: TGGCCAACTGCCTTGGAGCCATTTCAGTCCTCCGCAACTTAGCTCAGGTGGAGAGGCCGGCGCTACCGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520385.1
CDS TCA 72 bp CAAAGAACCCGGCTCGGTAGCGCCGGCCTCTCCACCTaGGCTAAGTTGCGGAGGACTGAAATGGCTCCAAGG +
Preference number: 6 (lower is better)
Translates to: QRTRLGSAGLST*AKLRRTEMAPR
Trigger: CCTTGGAGCCATTTCAGTCCTCCGCAACTTAGCTCAGGTGGAGAGGCCGGCGCTACCGAGCCGGGTTCTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520385.1
CDS CCA 72 bp GGCCAGGCCCTGCATTCTGACCACCGTGCCAGGCTGTaGAGGGACACCGCTAAGATTAGCAGCTGTAGGGAA +
Preference number: 6 (lower is better)
Translates to: GQALHSDHRARL*RDTAKISSCRE
Trigger: TTCCCTACAGCTGCTAATCTTAGCGGTGTCCCTCCACAGCCTGGCACGGTGGTCAGAATGCAGGGCCTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000517610.1
CDS CCA 72 bp GTACGCTGTGTAATTCATGAAGAGCTGAGTGCCTGCTaGGTAGTACGCTGTGGAGGGCTGCAGTGCTCGTGG +
Preference number: 6 (lower is better)
Translates to: VRCVIHEELSAC*VVRCGGLQCSW
Trigger: CCACGAGCACTGCAGCCCTCCACAGCGTACTACCCAGCAGGCACTCAGCTCTTCATGAATTACACAGCGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000517610.1
ENST00000519505.5
ENST00000646773.1
CDS CCA 72 bp TGCTGGGTAGTACGCTGTGGAGGGCTGCAGTGCTCGTaGATTCAAAATCACAGAGGGCTGGTAAATGGCAGC +
Preference number: 6 (lower is better)
Translates to: CWVVRCGGLQCS*IQNHRGLVNGS
Trigger: GCTGCCATTTACCAGCCCTCTGTGATTTTGAATCCACGAGCACTGCAGCCCTCCACAGCGTACTACCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000517610.1
ENST00000519505.5
ENST00000646773.1
CDS GCA 72 bp ACTGACTGGTTAAACTGTCGGAGGGCTTGGTCCAGCTaGGACGCCGAGGACAGGCTTTCGACGTCTATTTTA +
Preference number: 6 (lower is better)
Translates to: TDWLNCRRAWSS*DAEDRLSTSIL
Trigger: TAAAATAGACGTCGAAAGCCTGTCCTCGGCGTCGCAGCTGGACCAAGCCCTCCGACAGTTTAACCAGTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000520385.1
ENST00000646773.1
CDS GCA 72 bp AGTGCCTGCTGGGTAGTACGCTGTGGAGGGCTGCAGTaGTCGTGGATTCAAAATCACAGAGGGCTGGTAAAT +
Preference number: 6 (lower is better)
Translates to: SACWVVRCGGLQ*SWIQNHRGLVN
Trigger: ATTTACCAGCCCTCTGTGATTTTGAATCCACGAGCACTGCAGCCCTCCACAGCGTACTACCCAGCAGGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000517610.1
ENST00000519505.5
ENST00000646773.1
CDS CCA 72 bp AAAGAGGACAAAAGCGTCCCCTGTTGGCCTACCATCTaGGTAGGTGACAAAGAGGATGCCTTCCTTTCCCCC +
Preference number: 6 (lower is better)
Translates to: KEDKSVPCWPTI*VGDKEDAFLSP
Trigger: GGGGGAAAGGAAGGCATCCTCTTTGTCACCTACCCAGATGGTAGGCCAACAGGGGACGCTTTTGTCCTCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000517556.1
ENST00000517610.1
ENST00000519505.5
ENST00000646773.1
CDS CCA 72 bp TTCCTCACAGGCAAAGAGGACAAAAGCGTCCCCTGTTaGCCTACCATCTGGGTAGGTGACAAAGAGGATGCC +
Preference number: 6 (lower is better)
Translates to: FLTGKEDKSVPC*PTIWVGDKEDA
Trigger: GGCATCCTCTTTGTCACCTACCCAGATGGTAGGCCAACAGGGGACGCTTTTGTCCTCTTTGCCTGTGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000517556.1
ENST00000517610.1
ENST00000519505.5
ENST00000646773.1
CDS CAA 72 bp TGGCGAACTCCCCCAGGAAATCCAGGATGTCCTCAATaGTGGCTGCATAGGGAAGACCTCGAAGGCGTATAC +
Preference number: 6 (lower is better)
Translates to: WRTPPGNPGCPQ*WLHREDLEGVY
Trigger: GTATACGCCTTCGAGGTCTTCCCTATGCAGCCACAATTGAGGACATCCTGGATTTCCTGGGGGAGTTCGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000517610.1
ENST00000519505.5
ENST00000646773.1
CDS GCA 72 bp CTCCCCCAGGAAATCCAGGATGTCCTCAATTGTGGCTaGATAGGGAAGACCTCGAAGGCGTATACAGTCTCT +
Preference number: 6 (lower is better)
Translates to: LPQEIQDVLNCG*IGKTSKAYTVS
Trigger: AGAGACTGTATACGCCTTCGAGGTCTTCCCTATGCAGCCACAATTGAGGACATCCTGGATTTCCTGGGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000517610.1
ENST00000519505.5
ENST00000646773.1
CDS CCA 72 bp CGAACTCCCCCAGGAAATCCAGGATGTCCTCAATTGTaGCTGCATAGGGAAGACCTCGAAGGCGTATACAGT +
Preference number: 6 (lower is better)
Translates to: RTPPGNPGCPQL*LHREDLEGVYS
Trigger: ACTGTATACGCCTTCGAGGTCTTCCCTATGCAGCCACAATTGAGGACATCCTGGATTTCCTGGGGGAGTTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000517610.1
ENST00000519505.5
ENST00000646773.1
CDS TCA 72 bp TCGGTTGCATACTGGGATAGTACGCTGTGTAATTCATaGAGAGCTGAGTGCCTGCTGGGTAGTACGCTGTGG +
Preference number: 6 (lower is better)
Translates to: SVAYWDSTLCNS*RAECLLGSTLW
Trigger: CCACAGCGTACTACCCAGCAGGCACTCAGCTCTTCATGAATTACACAGCGTACTATCCCAGTATGCAACCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519505.5
CDS GCA 72 bp AAGAGGATGCCTTCCTTTCCCCCAGTAATAGGGCAATaGTGTCCAAAGAAGGCCACCACTTCTTCAGCTGTG +
Preference number: 6 (lower is better)
Translates to: KRMPSFPPVIGQ*CPKKATTSSAV
Trigger: CACAGCTGAAGAAGTGGTGGCCTTCTTTGGACAGCATTGCCCTATTACTGGGGGAAAGGAAGGCATCCTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000517556.1
ENST00000517610.1
ENST00000519505.5
ENST00000646773.1
CDS TCA 72 bp GGAAGTCCCTACTCCAATATTCAGTTCATTGCTCACTaGCTGGTTAAACTGTCGGAGGGCTTGGTCCAGCTG +
Preference number: 6 (lower is better)
Translates to: GSPYSNIQFIAH*LVKLSEGLVQL
Trigger: CAGCTGGACCAAGCCCTCCGACAGTTTAACCAGTCAGTGAGCAATGAACTGAATATTGGAGTAGGGACTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000520385.1
ENST00000646773.1
CDS GCA 72 bp GGCATGGCGGTGGGGATAAGCCATTTCGATTTAAAGTaGCCCCCATTAACACAAAGTTCATCTCCTCAGCTG +
Preference number: 6 (lower is better)
Translates to: GMAVGISHFDLK*PPLTQSSSPQL
Trigger: CAGCTGAGGAGATGAACTTTGTGTTAATGGGGGGCACTTTAAATCGAAATGGCTTATCCCCACCGCCATGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000454170.7
CDS TCA 72 bp TCTTTCAAACACTGGGATAGTACGCTGTGTAATTCATaGAGAGCTGAGTGCCTGCTGGGTAGTACGCTGTGG +
Preference number: 6 (lower is better)
Translates to: SFKHWDSTLCNS*RAECLLGSTLW
Trigger: CCACAGCGTACTACCCAGCAGGCACTCAGCTCTTCATGAATTACACAGCGTACTATCCCAGTGTTTGAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454170.7
ENST00000646773.1
CDS GCA 72 bp TACATGGCGGTGGGGATAAGCCATTTCGATTTAAAGTaGCCCCCATTAACACAAAGTTCATCTCCTCAGCTG +
Preference number: 6 (lower is better)
Translates to: YMAVGISHFDLK*PPLTQSSSPQL
Trigger: CAGCTGAGGAGATGAACTTTGTGTTAATGGGGGGCACTTTAAATCGAAATGGCTTATCCCCACCGCCATGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000433389.8
ENST00000517610.1
ENST00000519505.5
ENST00000646773.1
CDS TCA 72 bp ATACAGTCTCTAACATTTGTAGGGGGCACAAATTGCTaGGGTAGTACTGGAATAATGGGAGGGGTTGGAAGT +
Preference number: 6 (lower is better)
Translates to: IQSLTFVGGTNC*GSTGIMGGVGS
Trigger: ACTTCCAACCCCTCCCATTATTCCAGTACTACCTCAGCAATTTGTGCCCCCTACAAATGTTAGAGACTGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000517610.1
ENST00000519505.5
ENST00000646773.1
CDS CAA 72 bp AAATTTAAATACTCTGTCATTGTGGCAACGTCCAGTTaGTCAATATCAGGTGAACCAGGGCAACATTTCTTG +
Preference number: 6 (lower is better)
Translates to: KFKYSVIVATSS*SISGEPGQHFL
Trigger: CAAGAAATGTTGCCCTGGTTCACCTGATATTGACAAACTGGACGTTGCCACAATGACAGAGTATTTAAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000517610.1
ENST00000519505.5
ENST00000520385.1
ENST00000646773.1
CDS CAA 90 bp CTCTTCTCAAAATTTAAATACTCTGTCATTGTGGCAACGTCCAGTTaGTCAATATCAGGTGAACCAGGGCAACATTTCTTGAATTCTTTT +
Preference number: 6 (lower is better)
Translates to: LFSKFKYSVIVATSS*SISGEPGQHFLNSF
Trigger: AAAAGAATTCAAGAAATGTTGCCCTGGTTCACCTGATATTGACAAACTGGACGTTGCCACAATGACAGAGTATTTAAATTTTGAGAAGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358397.9
ENST00000423620.6
ENST00000433389.8
ENST00000454170.7
ENST00000519505.5
ENST00000520385.1
ENST00000646773.1