RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ESR1 (Homo sapiens)

Ensembl gene IDs: ENSG00000091831

Ensembl transcript IDs: ENST00000206249.8, ENST00000338799.9, ENST00000404742.5, ENST00000406599.5, ENST00000415488.1, ENST00000427531.6, ENST00000440973.5, ENST00000443427.5, ENST00000446550.1, ENST00000456483.3, ENST00000473497.5, ENST00000482101.1, ENST00000488573.1, ENST00000641399.1

Found 1225 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTTTGTTACTCATGTGCCTGATGTGGGAGAGGATGAGGAGGAGCTaGGCCAGCCGCTGGTGCTGCTGCTGCAGGGTCAGGCCTGCCTTG +
Preference number: 1 (lower is better)
Translates to: PLLLMCLMWERMRRS*ASRWCCCCRVRPAL
Trigger: CAAGGCAGGCCTGACCCTGCAGCAGCAGCACCAGCGGCTGGCCCAGCTCCTCCTCATCCTCTCCCACATCAGGCACATGAGTAACAAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456483.3
3UTR CCA 90 bp TGCAAGGAATGCGATGAAGTAGAGCCCGCAGTGGCCAAGTGGCTTTaGTCCGTCTCCTCCACGGATGCCCCTCCACGGCTAGTGGGCGCA +
Preference number: 1 (lower is better)
Translates to: CKECDEVEPAVAKWL*SVSSTDAPPRLVGA
Trigger: TGCGCCCACTAGCCGTGGAGGGGCATCCGTGGAGGAGACGGACCAAAGCCACTTGGCCACTGCGGGCTCTACTTCATCGCATTCCTTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456483.3
3UTR CCA 90 bp AGCTGCTTCTTCCAACCAGGGCCACGCTGGGAAATGAAGAAGAGCTaGACTACCCCAGGGATCCCAGGGCACCCCCAAAGGGCAATGCGG +
Preference number: 1 (lower is better)
Translates to: SCFFQPGPRWEMKKS*TTPGIPGHPQRAMR
Trigger: CCGCATTGCCCTTTGGGGGTGCCCTGGGATCCCTGGGGTAGTCCAGCTCTTCTTCATTTCCCAGCGTGGCCCTGGTTGGAAGAAGCAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR CCA 90 bp GTCTACAGCAGCTGTGACAGCTGCTTCTTCCAACCAGGGCCACGCTaGGAAATGAAGAAGAGCTGGACTACCCCAGGGATCCCAGGGCAC +
Preference number: 1 (lower is better)
Translates to: VYSSCDSCFFQPGPR*EMKKSWTTPGIPGH
Trigger: GTGCCCTGGGATCCCTGGGGTAGTCCAGCTCTTCTTCATTTCCCAGCGTGGCCCTGGTTGGAAGAAGCAGCTGTCACAGCTGCTGTAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR CCA 90 bp TACTTTTGCAAGGAATGCGATGAAGTAGAGCCCGCAGTGGCCAAGTaGCTTTGGTCCGTCTCCTCCACGGATGCCCCTCCACGGCTAGTG +
Preference number: 1 (lower is better)
Translates to: YFCKECDEVEPAVAK*LWSVSSTDAPPRLV
Trigger: CACTAGCCGTGGAGGGGCATCCGTGGAGGAGACGGACCAAAGCCACTTGGCCACTGCGGGCTCTACTTCATCGCATTCCTTGCAAAAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456483.3
3UTR GCA 90 bp GGTAGCTGCAGCCTGTGGCAGGGCCACCCTGAGCAAGTCTGGCTGTaGCTCAGAACTGTATCCAGTTTCTGCCCTACTTTCCCTCTTGTT +
Preference number: 1 (lower is better)
Translates to: GSCSLWQGHPEQVWL*LRTVSSFCPTFPLV
Trigger: AACAAGAGGGAAAGTAGGGCAGAAACTGGATACAGTTCTGAGGCACAGCCAGACTTGCTCAGGGTGGCCCTGCCACAGGCTGCAGCTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR CCA 90 bp AGGGCAGCAAGTGCTTCCTCATGCCTCCTAACAGGGCTTTGCAGCTaGGACAGCCACATTCTCACTACGACACTCGCAAGGCGCCTTTCA +
Preference number: 1 (lower is better)
Translates to: RAASASSCLLTGLCS*DSHILTTTLARRLS
Trigger: TGAAAGGCGCCTTGCGAGTGTCGTAGTGAGAATGTGGCTGTCCCAGCTGCAAAGCCCTGTTAGGAGGCATGAGGAAGCACTTGCTGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR TCA 90 bp GCAGGGTCAGGCCTGCCTTGGCCATCAGGTGGATCAAAGTGTCTGTaGTCTTGTCCAGGACTCGGTGGATATGGTCCTTCTCTTCCAGAG +
Preference number: 1 (lower is better)
Translates to: AGSGLPWPSGGSKCL*SCPGLGGYGPSLPE
Trigger: CTCTGGAAGAGAAGGACCATATCCACCGAGTCCTGGACAAGATCACAGACACTTTGATCCACCTGATGGCCAAGGCAGGCCTGACCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456483.3
3UTR TCA 90 bp ACCCTCTGCCTCCCCCGTGATGTAATACTTTTGCAAGGAATGCGATaGAGTAGAGCCCGCAGTGGCCAAGTGGCTTTGGTCCGTCTCCTC +
Preference number: 1 (lower is better)
Translates to: TLCLPRDVILLQGMR*SRARSGQVALVRLL
Trigger: GAGGAGACGGACCAAAGCCACTTGGCCACTGCGGGCTCTACTTCATCGCATTCCTTGCAAAAGTATTACATCACGGGGGAGGCAGAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456483.3
3UTR GCA 90 bp CACCCCTGTGTAAGGCACACACACGCCGGGAAGATCCAAGTACAGTaGCCACTGGAACAGGTCCTGAAGCTGACCTTACTGCAAGTTCAG +
Preference number: 1 (lower is better)
Translates to: HPCVRHTHAGKIQVQ*PLEQVLKLTLLQVQ
Trigger: CTGAACTTGCAGTAAGGTCAGCTTCAGGACCTGTTCCAGTGGGCACTGTACTTGGATCTTCCCGGCGTGTGTGTGCCTTACACAGGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR GCA 90 bp TTTCTTAGGGCAGCAAGTGCTTCCTCATGCCTCCTAACAGGGCTTTaGAGCTGGGACAGCCACATTCTCACTACGACACTCGCAAGGCGC +
Preference number: 1 (lower is better)
Translates to: FLRAASASSCLLTGL*SWDSHILTTTLARR
Trigger: GCGCCTTGCGAGTGTCGTAGTGAGAATGTGGCTGTCCCAGCTGCAAAGCCCTGTTAGGAGGCATGAGGAAGCACTTGCTGCCCTAAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR CCA 90 bp CTGTTTGGGGCACACCCAACCCCGAGAATGAAAGGCAGAGTCTGCTaGGGAAGAATGAACTTCACCCACAGTCCAGGCTGTCGTGGTGTT +
Preference number: 1 (lower is better)
Translates to: LFGAHPTPRMKGRVC*GRMNFTHSPGCRGV
Trigger: AACACCACGACAGCCTGGACTGTGGGTGAAGTTCATTCTTCCCCAGCAGACTCTGCCTTTCATTCTCGGGGTTGGGTGTGCCCCAAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR GCA 90 bp TGGGCCAATTGTAGGAACACAGCTGTCTACAGCAGCTGTGACAGCTaGTTCTTCCAACCAGGGCCACGCTGGGAAATGAAGAAGAGCTGG +
Preference number: 1 (lower is better)
Translates to: WANCRNTAVYSSCDS*FFQPGPRWEMKKSW
Trigger: CCAGCTCTTCTTCATTTCCCAGCGTGGCCCTGGTTGGAAGAAGCAGCTGTCACAGCTGCTGTAGACAGCTGTGTTCCTACAATTGGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR TCA 90 bp GCACACAAACTCCTCTCCCTGCAGATTCATCATGCGGAACCGAGATaGTGTAGCCAGCAGCATGTCGAAGATCTCCACCATGCCCTCTAC +
Preference number: 1 (lower is better)
Translates to: AHKLLSLQIHHAEPR*CSQQHVEDLHHALY
Trigger: GTAGAGGGCATGGTGGAGATCTTCGACATGCTGCTGGCTACATCATCTCGGTTCCGCATGATGAATCTGCAGGGAGAGGAGTTTGTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456483.3
3UTR GCA 90 bp TCTCTAGTAGCCACAACAATCCTGCACAAGTACTGTTCAGCTCCATaGCCCAGGGCTAAATGCAACACCAGGGCCCCTGCTCCTTTCAAC +
Preference number: 1 (lower is better)
Translates to: SLVATTILHKYCSAP*PRAKCNTRAPAPFN
Trigger: GTTGAAAGGAGCAGGGGCCCTGGTGTTGCATTTAGCCCTGGGGCATGGAGCTGAACAGTACTTGTGCAGGATTGTTGTGGCTACTAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR GCA 90 bp ACAATCCTGCACAAGTACTGTTCAGCTCCATGCCCCAGGGCTAAATaGAACACCAGGGCCCCTGCTCCTTTCAACTACCATTTACCCTCA +
Preference number: 1 (lower is better)
Translates to: TILHKYCSAPCPRAK*NTRAPAPFNYHLPS
Trigger: TGAGGGTAAATGGTAGTTGAAAGGAGCAGGGGCCCTGGTGTTGCATTTAGCCCTGGGGCATGGAGCTGAACAGTACTTGTGCAGGATTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR CCA 90 bp AACGTCATCCAACACCTTCACAGACAGGTTGTGGTTGAACATTCTTaGGCTTCGTTACCGTCGGTACCTCTGTTTGGGGCACACCCAACC +
Preference number: 1 (lower is better)
Translates to: NVIQHLHRQVVVEHS*ASLPSVPLFGAHPT
Trigger: GGTTGGGTGTGCCCCAAACAGAGGTACCGACGGTAACGAAGCCCAAGAATGTTCAACCACAACCTGTCTGTGAAGGTGTTGGATGACGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR CCA 90 bp GCCATCAGGTGGATCAAAGTGTCTGTGATCTTGTCCAGGACTCGGTaGATATGGTCCTTCTCTTCCAGAGACTTCAGGGTGCTGGACAGA +
Preference number: 1 (lower is better)
Translates to: AIRWIKVSVILSRTR*IWSFSSRDFRVLDR
Trigger: TCTGTCCAGCACCCTGAAGTCTCTGGAAGAGAAGGACCATATCCACCGAGTCCTGGACAAGATCACAGACACTTTGATCCACCTGATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456483.3
3UTR TCA 90 bp CTGCTCCTTTCAACTACCATTTACCCTCATCATGCATCACCACAGTaGACAGTTCACCCCTGTGTAAGGCACACACACGCCGGGAAGATC +
Preference number: 1 (lower is better)
Translates to: LLLSTTIYPHHASPQ*TVHPCVRHTHAGKI
Trigger: GATCTTCCCGGCGTGTGTGTGCCTTACACAGGGGTGAACTGTTCACTGTGGTGATGCATGATGAGGGTAAATGGTAGTTGAAAGGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR TCA 90 bp CTGAATGGCAAACGTCATCCAACACCTTCACAGACAGGTTGTGGTTaGACATTCTTGGGCTTCGTTACCGTCGGTACCTCTGTTTGGGGC +
Preference number: 1 (lower is better)
Translates to: LNGKRHPTPSQTGCG*TFLGFVTVGTSVWG
Trigger: GCCCCAAACAGAGGTACCGACGGTAACGAAGCCCAAGAATGTTCAACCACAACCTGTCTGTGAAGGTGTTGGATGACGTTTGCCATTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR GCA 90 bp AAAATGTCGAAGGCATCGTTTCTTAGGGCAGCAAGTGCTTCCTCATaGCTCCTAACAGGGCTTTGCAGCTGGGACAGCCACATTCTCACT +
Preference number: 1 (lower is better)
Translates to: KMSKASFLRAASASS*LLTGLCSWDSHILT
Trigger: AGTGAGAATGTGGCTGTCCCAGCTGCAAAGCCCTGTTAGGAGGCATGAGGAAGCACTTGCTGCCCTAAGAAACGATGCCTTCGACATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR CCA 90 bp CCTCTCTGTGAATGCAAAGGGGTCTGTGTCTCAGGCACCTGCTCATaGGACAATATGTTGTTTCTAGGGTGCACAGCTCTAAACACACAC +
Preference number: 1 (lower is better)
Translates to: PLCECKGVCVSGTCS*DNMLFLGCTALNTH
Trigger: GTGTGTGTTTAGAGCTGTGCACCCTAGAAACAACATATTGTCCCATGAGCAGGTGCCTGAGACACAGACCCCTTTGCATTCACAGAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR GCA 90 bp ATGCATGCCGGAGTGTATGCAGGAGACAGAATTTGGCTAAAGTGGTaGATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTG +
Preference number: 1 (lower is better)
Translates to: MHAGVYAGDRIWLKW*MMRVKCSRDYLNRV
Trigger: CACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCTGCATACACTCCGGCATGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR CCA 90 bp TGGATGCATGCCGGAGTGTATGCAGGAGACAGAATTTGGCTAAAGTaGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGT +
Preference number: 1 (lower is better)
Translates to: WMHAGVYAGDRIWLK*CMMRVKCSRDYLNR
Trigger: ACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCTGCATACACTCCGGCATGCATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR GCA 90 bp CACTCATCTAGAAAGCCATTGGTGTTGGATGCATGCCGGAGTGTATaGAGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAA +
Preference number: 1 (lower is better)
Translates to: HSSRKPLVLDACRSV*RRQNLAKVVHDEGK
Trigger: TTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCTGCATACACTCCGGCATGCATCCAACACCAATGGCTTTCTAGATGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR GCA 90 bp CAAATGAATGGCCACTCATCTAGAAAGCCATTGGTGTTGGATGCATaGCGGAGTGTATGCAGGAGACAGAATTTGGCTAAAGTGGTGCAT +
Preference number: 1 (lower is better)
Translates to: QMNGHSSRKPLVLDA*RSVCRRQNLAKVVH
Trigger: ATGCACCACTTTAGCCAAATTCTGTCTCCTGCATACACTCCGGCATGCATCCAACACCAATGGCTTTCTAGATGAGTGGCCATTCATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR TCA 90 bp TCACCCACAGTCCAGGCTGTCGTGGTGTTCCTTTACATTGAGACTTaGGATATCTCGTGTTTAATCTTGCACTGGTCCAGCAAATTGGAA +
Preference number: 1 (lower is better)
Translates to: SPTVQAVVVFLYIET*DISCLILHWSSKLE
Trigger: TTCCAATTTGCTGGACCAGTGCAAGATTAAACACGAGATATCTCAAGTCTCAATGTAAAGGAACACCACGACAGCCTGGACTGTGGGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR TCA 90 bp ATGAACTTCACCCACAGTCCAGGCTGTCGTGGTGTTCCTTTACATTaGGACTTGAGATATCTCGTGTTTAATCTTGCACTGGTCCAGCAA +
Preference number: 1 (lower is better)
Translates to: MNFTHSPGCRGVPLH*DLRYLVFNLALVQQ
Trigger: TTGCTGGACCAGTGCAAGATTAAACACGAGATATCTCAAGTCTCAATGTAAAGGAACACCACGACAGCCTGGACTGTGGGTGAAGTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR CCA 90 bp GGAAAGCGCTTATGTTATGATGCAACGCCAACAGCAGTCACTCTTTaGTTCCCAAATATTGCGTCTATCTGCTCTCCGCATTGTTTCAGA +
Preference number: 1 (lower is better)
Translates to: GKRLCYDATPTAVTL*FPNIASICSPHCFR
Trigger: TCTGAAACAATGCGGAGAGCAGATAGACGCAATATTTGGGAACCAAAGAGTGACTGCTGTTGGCGTTGCATCATAACATAAGCGCTTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR TCA 90 bp AGCTCTCTTCAGTCACTCTGTTATAACTCATCTAGCTACAGGTGTTaGGTGTTGGTTGCCAGGGCATATTTTAAAGTCAGGGGAAGGATG +
Preference number: 1 (lower is better)
Translates to: SSLQSLCYNSSSYRC*VLVARAYFKVRGRM
Trigger: CATCCTTCCCCTGACTTTAAAATATGCCCTGGCAACCAACACTCAACACCTGTAGCTAGATGAGTTATAACAGAGTGACTGAAGAGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR CCA 90 bp AATATCCCCACAGCATTCCTTCGAGGATACCAGAGATCAGTTCTTTaGTTGATACAAATGATAGTGACGAGAAGGGGGAAAGCGCTTATG +
Preference number: 1 (lower is better)
Translates to: NIPTAFLRGYQRSVL*LIQMIVTRRGKALM
Trigger: CATAAGCGCTTTCCCCCTTCTCGTCACTATCATTTGTATCAACCAAAGAACTGATCTCTGGTATCCTCGAAGGAATGCTGTGGGGATATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR TCA 90 bp GAAACTGGCATAATGTCACTTATTAATTCAAGTCTCTATAACCAATaGCCTCTCTGTGAATGCAAAGGGGTCTGTGTCTCAGGCACCTGC +
Preference number: 1 (lower is better)
Translates to: ETGIMSLINSSLYNQ*PLCECKGVCVSGTC
Trigger: GCAGGTGCCTGAGACACAGACCCCTTTGCATTCACAGAGAGGTCATTGGTTATAGAGACTTGAATTAATAAGTGACATTATGCCAGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR TCA 90 bp TTGATACAAATGATAGTGACGAGAAGGGGGAAAGCGCTTATGTTATaGTGCAACGCCAACAGCAGTCACTCTTTGGTTCCCAAATATTGC +
Preference number: 1 (lower is better)
Translates to: LIQMIVTRRGKALML*CNANSSHSLVPKYC
Trigger: GCAATATTTGGGAACCAAAGAGTGACTGCTGTTGGCGTTGCATCATAACATAAGCGCTTTCCCCCTTCTCGTCACTATCATTTGTATCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR GCA 90 bp ACGCCAACAGCAGTCACTCTTTGGTTCCCAAATATTGCGTCTATCTaGTCTCCGCATTGTTTCAGACAGCCACATAGATCTTTTGAAAAT +
Preference number: 1 (lower is better)
Translates to: TPTAVTLWFPNIASI*SPHCFRQPHRSFEN
Trigger: ATTTTCAAAAGATCTATGTGGCTGTCTGAAACAATGCGGAGAGCAGATAGACGCAATATTTGGGAACCAAAGAGTGACTGCTGTTGGCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR CCA 90 bp TTGATTCTGGAAACTTGTCTCCTGAACCATATATCCAGGAAACACTaGGTTTCAAAGACAAGACACATAAGGGCAGGATCAAGATCACGG +
Preference number: 1 (lower is better)
Translates to: LILETCLLNHISRKH*VSKTRHIRAGSRSR
Trigger: CCGTGATCTTGATCCTGCCCTTATGTGTCTTGTCTTTGAAACCCAGTGTTTCCTGGATATATGGTTCAGGAGACAAGTTTCCAGAATCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR TCA 90 bp CTATTTGCCTTTCACATAACTAGCTTCCCCAAGCAGATCTGCCTGTaGATATTAGACATTACTATGGTGTTAGTGATCACTCCCAGTACC +
Preference number: 1 (lower is better)
Translates to: LFAFHITSFPKQICL*ILDITMVLVITPST
Trigger: GGTACTGGGAGTGATCACTAACACCATAGTAATGTCTAATATTCACAGGCAGATCTGCTTGGGGAAGCTAGTTATGTGAAAGGCAAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR CCA 90 bp TTAGTGGCACTTCAAGTAAAAATACAAAGAGATTTCCAAAGTTGCTaGAGACCCCTGGGCGAACATTTCAATCATCTGATGTTCTCTGCC +
Preference number: 1 (lower is better)
Translates to: LVALQVKIQRDFQSC*RPLGEHFNHLMFSA
Trigger: GGCAGAGAACATCAGATGATTGAAATGTTCGCCCAGGGGTCTCCAGCAACTTTGGAAATCTCTTTGTATTTTTACTTGAAGTGCCACTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR TCA 90 bp GCTGTCATGATTTATGATTCAATGGTTTGCCATTTTTCTCAGGAGTaGACAGGTCAATGGGCAGCCCTTGTTTTGATCTTGATCTTTGAC +
Preference number: 1 (lower is better)
Translates to: AVMIYDSMVCHFSQE*TGQWAALVLILIFD
Trigger: GTCAAAGATCAAGATCAAAACAAGGGCTGCCCATTGACCTGTTCACTCCTGAGAAAAATGGCAAACCATTGAATCATAAATCATGACAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR GCA 90 bp AATCTAGATCACGCTCCCAAGACCTGCACCAAAGAGAATTATGGTTaGCTTTTGAGCTACTGTATGACTCTATTTGCCTTTCACATAACT +
Preference number: 1 (lower is better)
Translates to: NLDHAPKTCTKENYG*LLSYCMTLFAFHIT
Trigger: AGTTATGTGAAAGGCAAATAGAGTCATACAGTAGCTCAAAAGGCAACCATAATTCTCTTTGGTGCAGGTCTTGGGAGCGTGATCTAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR CCA 90 bp CTTAGAATTGTAAAATGCAAAATTGCCTTGGGCACCTTAGGTCTCTaGCACCTTCTTTACAGAGAACTAAGATGGAATGAGAAGTGGCAA +
Preference number: 1 (lower is better)
Translates to: LRIVKCKIALGTLGL*HLLYRELRWNEKWQ
Trigger: TTGCCACTTCTCATTCCATCTTAGTTCTCTGTAAAGAAGGTGCCAGAGACCTAAGGTGCCCAAGGCAATTTTGCATTTTACAATTCTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR TCA 90 bp GGACAATATGTTGTTTCTAGGGTGCACAGCTCTAAACACACACACTaGCGATGGGTTTGGAACATGGCAGCATTTACATATTTTAAAAGT +
Preference number: 1 (lower is better)
Translates to: GQYVVSRVHSSKHTH*RWVWNMAAFTYFKS
Trigger: ACTTTTAAAATATGTAAATGCTGCCATGTTCCAAACCCATCGTCAGTGTGTGTGTTTAGAGCTGTGCACCCTAGAAACAACATATTGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR GCA 90 bp ATTGTTTACAGGTGCTCGAGCATCCCGCTGGATTCTTTTTCAAAGTaGAAAAGAGGTTTACAAGTGTGTTTCATTAAACAAAGCAAAGCT +
Preference number: 1 (lower is better)
Translates to: IVYRCSSIPLDSFSK*KRGLQVCFIKQSKA
Trigger: AGCTTTGCTTTGTTTAATGAAACACACTTGTAAACCTCTTTTGCACTTTGAAAAAGAATCCAGCGGGATGCTCGAGCACCTGTAAACAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR CCA 90 bp AGTTGGAAACAGAGCATAATTAACGCTACTGAAAAGATGGATATTTaGGACCAAAGTTCATTTGCTCCAGTTGAGAGTAAGTTTTCAGGG +
Preference number: 1 (lower is better)
Translates to: SWKQSIINATEKMDI*DQSSFAPVESKFSG
Trigger: CCCTGAAAACTTACTCTCAACTGGAGCAAATGAACTTTGGTCCCAAATATCCATCTTTTCAGTAGCGTTAATTATGCTCTGTTTCCAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR GCA 90 bp AAATCATGTTCCTACACCCAATACCAACATCAGCCAGAAAATATCTaGTGTCCATTAGTGGCACTTCAAGTAAAAATACAAAGAGATTTC +
Preference number: 1 (lower is better)
Translates to: KSCSYTQYQHQPENI*CPLVALQVKIQRDF
Trigger: GAAATCTCTTTGTATTTTTACTTGAAGTGCCACTAATGGACAGCAGATATTTTCTGGCTGATGTTGGTATTGGGTGTAGGAACATGATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR CCA 90 bp TGCTACATAAGATTGTCTGTCATTCAGTATCCAACAATAGGCATCTaGATTAGTGCTATTTTGTCTACTGTGGATACAAAAGTTGATATG +
Preference number: 1 (lower is better)
Translates to: CYIRLSVIQYPTIGI*ISAILSTVDTKVDM
Trigger: CATATCAACTTTTGTATCCACAGTAGACAAAATAGCACTAATCCAGATGCCTATTGTTGGATACTGAATGACAGACAATCTTATGTAGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR CAA 90 bp AGCTGGGCCAGCCGCTGGTGCTGCTGCTGCAGGGTCAGGCCTGCCTaGGCCATCAGGTGGATCAAAGTGTCTGTGATCTTGTCCAGGACT +
Preference number: 2 (lower is better)
Translates to: SWASRWCCCCRVRPA*AIRWIKVSVILSRT
Trigger: AGTCCTGGACAAGATCACAGACACTTTGATCCACCTGATGGCCAAGGCAGGCCTGACCCTGCAGCAGCAGCACCAGCGGCTGGCCCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456483.3
3UTR-3UTR CCA 90 bp CCTCCACGGCTAGTGGGCGCATGTAGGCGGTGGGCGTCCAGCATCTCCAGCAGCGAGACTTCAGGGTGCTaGACAGAAATGTGTACACTC +
Preference number: 2 (lower is better)
Translates to: PPRLVGACRRWASSISSSETSGC*TEMCTL
Trigger: GAGTGTACACATTTCTGTCCAGCACCCTGAAGTCTC...GCTGCTGGAGATGCTGGACGCCCACCGCCTACATGCGCCCACTAGCCGTGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456483.3
3UTR-3UTR CCA 90 bp GTCAGGCCTGCCTTGGCCATCAGGTGGATCAAAGTGTCTGTGATCTTGTCCAGGCGGAGCCGGCAGGCCTaGCAGCTCTTCCTCCTGTTT +
Preference number: 2 (lower is better)
Translates to: VRPALAIRWIKVSVILSRRSRQA*QLFLLF
Trigger: AAACAGGAGGAAGAGCTGCCAGGCCTGCCGGCTCCG...CCTGGACAAGATCACAGACACTTTGATCCACCTGATGGCCAAGGCAGGCCTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456483.3
3UTR-3UTR TCA 90 bp AAAATGTCGAAGGCATCGTTTCTTAGGGCAGCAAGTGCTTCCTCATGCCTCCTAAACCCAGGTCTCCCCTaGCTCCAGACCCTACCCCGT +
Preference number: 2 (lower is better)
Translates to: KMSKASFLRAASASSCLLNPGLP*LQTLPR
Trigger: ACGGGGTAGGGTCTGGAGTCAGGGGAGACCTGGGTT...TAGGAGGCATGAGGAAGCACTTGCTGCCCTAAGAAACGATGCCTTCGACATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR CCA 90 bp ATTGTGCTAGAGAAGCAAAGGCCCAGGGAAGGCTGCCCTGTGGCTGGAATGAGCGAAATGAAGAAGAGCTaGACTACCCCAGGGATCCCA +
Preference number: 2 (lower is better)
Translates to: IVLEKQRPREGCPVAGMSEMKKS*TTPGIP
Trigger: TGGGATCCCTGGGGTAGTCCAGCTCTTCTTCATTTC...GCTCATTCCAGCCACAGGGCAGCCTTCCCTGGGCCTTTGCTTCTCTAGCACAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR CAA 90 bp GTCAGGCCTGCCTTGGCCATCAGGTGGATCAAAGTGTCTGTGATCTaGTCCAGGACTCGGTGGATATGGTCCTTCTCTTCCAGAGACTTC +
Preference number: 2 (lower is better)
Translates to: VRPALAIRWIKVSVI*SRTRWIWSFSSRDF
Trigger: GAAGTCTCTGGAAGAGAAGGACCATATCCACCGAGTCCTGGACAAGATCACAGACACTTTGATCCACCTGATGGCCAAGGCAGGCCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456483.3
3UTR-3UTR TCA 90 bp ACCCCGAGAATGAAAGGCAGAGTCTGCTGGGGAAGAATGAACTTCACCCACAGTCAACCCCTAAGGGTATaGGTCGGCACACCCTTGGTA +
Preference number: 2 (lower is better)
Translates to: TPRMKGRVCWGRMNFTHSQPLRV*VGTPLV
Trigger: TACCAAGGGTGTGCCGACTCATACCCTTAGGGGTTG...ACTGTGGGTGAAGTTCATTCTTCCCCAGCAGACTCTGCCTTTCATTCTCGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR TCA 90 bp TACTTTTGCAAGGAATGCGATGAAGTAGAGCCCGCAGTGGCCAAGTGGCTTTGGCATGCGGAACCGAGATaGTGTAGCCAGCAGCATGTC +
Preference number: 2 (lower is better)
Translates to: YFCKECDEVEPAVAKWLWHAEPR*CSQQHV
Trigger: GACATGCTGCTGGCTACATCATCTCGGTTCCGCATG...CCAAAGCCACTTGGCCACTGCGGGCTCTACTTCATCGCATTCCTTGCAAAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456483.3
3UTR-3UTR GCA 90 bp TGCAAGGAATGCGATGAAGTAGAGCCCGCAGTGGCCAAGTGGCTTTGGTCCGTCCGAAGATCTCCACCATaGCCTCTACACATTTTCCCT +
Preference number: 2 (lower is better)
Translates to: CKECDEVEPAVAKWLWSVRRSPP*PLHIFP
Trigger: AGGGAAAATGTGTAGAGGGCATGGTGGAGATCTTCG...GACGGACCAAAGCCACTTGGCCACTGCGGGCTCTACTTCATCGCATTCCTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456483.3
3UTR-3UTR CCA 90 bp TGCAAGGAATGCGATGAAGTAGAGCCCGCAGTGGCCAAGTGGCTTTGGTCCGTCCAATGGTGCACTGGTTaGTGGCTGGACACATATAGT +
Preference number: 2 (lower is better)
Translates to: CKECDEVEPAVAKWLWSVQWCTG*WLDTYS
Trigger: ACTATATGTGTCCAGCCACCAACCAGTGCACCATTG...GACGGACCAAAGCCACTTGGCCACTGCGGGCTCTACTTCATCGCATTCCTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456483.3
3UTR CAA 90 bp TGCAAAGGGGTCTGTGTCTCAGGCACCTGCTCATGGGACAATATGTaGTTTCTAGGGTGCACAGCTCTAAACACACACACTGACGATGGG +
Preference number: 2 (lower is better)
Translates to: CKGVCVSGTCSWDNM*FLGCTALNTHTDDG
Trigger: CCCATCGTCAGTGTGTGTGTTTAGAGCTGTGCACCCTAGAAACAACATATTGTCCCATGAGCAGGTGCCTGAGACACAGACCCCTTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR CAA 90 bp CCTGAATGGCAAACGTCATCCAACACCTTCACAGACAGGTTGTGGTaGAACATTCTTGGGCTTCGTTACCGTCGGTACCTCTGTTTGGGG +
Preference number: 2 (lower is better)
Translates to: PEWQTSSNTFTDRLW*NILGLRYRRYLCLG
Trigger: CCCCAAACAGAGGTACCGACGGTAACGAAGCCCAAGAATGTTCAACCACAACCTGTCTGTGAAGGTGTTGGATGACGTTTGCCATTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR TCA 90 bp GGGGGAAAGCGCTTATGTTATGATGCAACGCCAACAGCAGTCACTCTTTGGTTCATCTGCAGGATACTGTaGGGCCTTATGACCAGAGGC +
Preference number: 2 (lower is better)
Translates to: GGKRLCYDATPTAVTLWFICRIL*GLMTRG
Trigger: GCCTCTGGTCATAAGGCCTCACAGTATCCTGCAGAT...GAACCAAAGAGTGACTGCTGTTGGCGTTGCATCATAACATAAGCGCTTTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR TCA 90 bp GGGGGAAAGCGCTTATGTTATGATGCAACGCCAACAGCAGTCACTCTTTGGTTCTCTGCTGGGGAAGAATaGACTTCACCCACAGTCCAG +
Preference number: 2 (lower is better)
Translates to: GGKRLCYDATPTAVTLWFSAGEE*TSPTVQ
Trigger: CTGGACTGTGGGTGAAGTTCATTCTTCCCCAGCAGA...GAACCAAAGAGTGACTGCTGTTGGCGTTGCATCATAACATAAGCGCTTTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR CCA 90 bp CGGAACCGAGATGATGTAGCCAGCAGCATGTCGAAGATCTCCACCATGCCCTCTTTATCAATGGTGCACTaGTTGGTGGCTGGACACATA +
Preference number: 2 (lower is better)
Translates to: RNRDDVASSMSKISTMPSLSMVH*LVAGHI
Trigger: TATGTGTCCAGCCACCAACCAGTGCACCATTGATAA...AGAGGGCATGGTGGAGATCTTCGACATGCTGCTGGCTACATCATCTCGGTTCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456483.3
3UTR-3UTR CCA 90 bp TACTTTTGCAAGGAATGCGATGAAGTAGAGCCCGCAGTGGCCAAGTGGCTTTGGTTGTCCAGGACTCGGTaGATATGGTCCTTCTCTTCC +
Preference number: 2 (lower is better)
Translates to: YFCKECDEVEPAVAKWLWLSRTR*IWSFSS
Trigger: GGAAGAGAAGGACCATATCCACCGAGTCCTGGACAA...CCAAAGCCACTTGGCCACTGCGGGCTCTACTTCATCGCATTCCTTGCAAAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456483.3
3UTR CAA 90 bp GATTTTAGCCACTACTCCCTCCCTGCCATTCTCCTTATCCCGCAATaGTCTAGGTATTTTGGGACAGAGATGAAGCAACTCCTGGGCAGC +
Preference number: 2 (lower is better)
Translates to: DFSHYSLPAILLIPQ*SRYFGTEMKQLLGS
Trigger: GCTGCCCAGGAGTTGCTTCATCTCTGTCCCAAAATACCTAGACAATTGCGGGATAAGGAGAATGGCAGGGAGGGAGTAGTGGCTAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR TCA 90 bp AAAGGCATGGGCTATGGCTTGGTTAAACATATCTGCAAGGTTACTAGGGAAATCGCAGCAGGGATTATCTaGACCGTGTGGGAGCCAGGG +
Preference number: 2 (lower is better)
Translates to: KGMGYGLVKHICKVTREIAAGII*TVWEPG
Trigger: CCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGC...GATTTCCCTAGTAACCTTGCAGATATGTTTAACCAAGCCATAGCCCATGCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR-3UTR TCA 90 bp AAAATGTCGAAGGCATCGTTTCTTAGGGCAGCAAGTGCTTCCTCATGCCTCCTATCTAGCTACAGGTGTTaGGTGTTGGTTGCCAGGGCA +
Preference number: 2 (lower is better)
Translates to: KMSKASFLRAASASSCLLSSYRC*VLVARA
Trigger: TGCCCTGGCAACCAACACTCAACACCTGTAGCTAGA...TAGGAGGCATGAGGAAGCACTTGCTGCCCTAAGAAACGATGCCTTCGACATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR TCA 90 bp CACTCTTTGGTTCCCAAATATTGCGTCTATCTGCTCTCCGCATTGTTTCAGACAACCCAACCCCGAGAATaGAAGGCAGAGTCTGCTGGG +
Preference number: 2 (lower is better)
Translates to: HSLVPKYCVYLLSALFQTTQPRE*KAESAG
Trigger: CCCAGCAGACTCTGCCTTTCATTCTCGGGGTTGGGT...TGTCTGAAACAATGCGGAGAGCAGATAGACGCAATATTTGGGAACCAAAGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR GCA 90 bp TCTACTGAACCCTGGTGCACACCCAGAATTAACCATTTTCCTCCAAATACTTTCTGCCCCAGGGCTAAATaGAACACCAGGGCCCCTGCT +
Preference number: 2 (lower is better)
Translates to: STEPWCTPRINHFPPNTFCPRAK*NTRAPA
Trigger: AGCAGGGGCCCTGGTGTTGCATTTAGCCCTGGGGCA...GAAAGTATTTGGAGGAAAATGGTTAATTCTGGGTGTGCACCAGGGTTCAGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR-3UTR CCA 90 bp GGCAGGGAAACCCTCTGCCTCCCCCGTGATGTAATACTTTTGCAAGGAATGCGATCCTGTTTTTATCAATaGTGCACTGGTTGGTGGCTG +
Preference number: 2 (lower is better)
Translates to: GRETLCLPRDVILLQGMRSCFYQ*CTGWWL
Trigger: CAGCCACCAACCAGTGCACCATTGATAAAAACAGGA...TCGCATTCCTTGCAAAAGTATTACATCACGGGGGAGGCAGAGGGTTTCCCTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000456483.3
3UTR CAA 90 bp TCTTCACCTGAATGGCAAACGTCATCCAACACCTTCACAGACAGGTaGTGGTTGAACATTCTTGGGCTTCGTTACCGTCGGTACCTCTGT +
Preference number: 2 (lower is better)
Translates to: SSPEWQTSSNTFTDR*WLNILGLRYRRYLC
Trigger: ACAGAGGTACCGACGGTAACGAAGCCCAAGAATGTTCAACCACAACCTGTCTGTGAAGGTGTTGGATGACGTTTGCCATTCAGGTGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR CAA 90 bp CCATTGGTGTTGGATGCATGCCGGAGTGTATGCAGGAGACAGAATTaGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTA +
Preference number: 2 (lower is better)
Translates to: PLVLDACRSVCRRQN*AKVVHDEGKMQQGL
Trigger: TAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCTGCATACACTCCGGCATGCATCCAACACCAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR-3UTR TCA 90 bp CTTTCCCTCTTGTTCTCTAGTAGCCACAACAATCCTGCACAAGTACTGTTCAGCATGCACAGAGTTATCTaGGCCCCAACCCATAGACTG +
Preference number: 2 (lower is better)
Translates to: LSLLFSSSHNNPAQVLFSMHRVI*APTHRL
Trigger: CAGTCTATGGGTTGGGGCTCAGATAACTCTGTGCAT...GCTGAACAGTACTTGTGCAGGATTGTTGTGGCTACTAGAGAACAAGAGGGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR-3UTR TCA 90 bp GGGGGAAAGCGCTTATGTTATGATGCAACGCCAACAGCAGTCACTCTTTGGTTCTGCACGGACAGTCACTaGATATTGTGTGTTCTCTCT +
Preference number: 2 (lower is better)
Translates to: GGKRLCYDATPTAVTLWFCTDSH*ILCVLS
Trigger: AGAGAGAACACACAATATTCAGTGACTGTCCGTGCA...GAACCAAAGAGTGACTGCTGTTGGCGTTGCATCATAACATAAGCGCTTTCCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR TCA 90 bp AAAATGTCGAAGGCATCGTTTCTTAGGGCAGCAAGTGCTTCCTCATGCCTCCTACAGACAGGTTGTGGTTaGACATTCTTGGGCTTCGTT +
Preference number: 2 (lower is better)
Translates to: KMSKASFLRAASASSCLLQTGCG*TFLGFV
Trigger: AACGAAGCCCAAGAATGTTCAACCACAACCTGTCTG...TAGGAGGCATGAGGAAGCACTTGCTGCCCTAAGAAACGATGCCTTCGACATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR GCA 90 bp TGTGATCTTGTCCAGGACTCGGTGGATATGGTCCTTCTCTTCCAGAGACTTCAGTGTTTTTATCAATGGTaGACTGGTTGGTGGCTGGAC +
Preference number: 2 (lower is better)
Translates to: CDLVQDSVDMVLLFQRLQCFYQW*TGWWLD
Trigger: GTCCAGCCACCAACCAGTGCACCATTGATAAAAACA...CTGAAGTCTCTGGAAGAGAAGGACCATATCCACCGAGTCCTGGACAAGATCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456483.3
3UTR-3UTR CCA 90 bp AAAATGTCGAAGGCATCGTTTCTTAGGGCAGCAAGTGCTTCCTCATGCCTCCTAGGCACCTTAGGTCTCTaGCACCTTCTTTACAGAGAA +
Preference number: 2 (lower is better)
Translates to: KMSKASFLRAASASSCLLGTLGL*HLLYRE
Trigger: TTCTCTGTAAAGAAGGTGCCAGAGACCTAAGGTGCC...TAGGAGGCATGAGGAAGCACTTGCTGCCCTAAGAAACGATGCCTTCGACATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR CAA 90 bp CTGAGCAAGCAAATGAATGGCCACTCATCTAGAAAGCCATTGGTGTaGGATGCATGCCGGAGTGTATGCAGGAGACAGAATTTGGCTAAA +
Preference number: 2 (lower is better)
Translates to: LSKQMNGHSSRKPLV*DACRSVCRRQNLAK
Trigger: TTTAGCCAAATTCTGTCTCCTGCATACACTCCGGCATGCATCCAACACCAATGGCTTTCTAGATGAGTGGCCATTCATTTGCTTGCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR CAA 90 bp CGTCTATCTGCTCTCCGCATTGTTTCAGACAGCCACATAGATCTTTaGAAAATGTCGAAGGCATCGTTTCTTAGGGCAGCAAGTGCTTCC +
Preference number: 2 (lower is better)
Translates to: RLSALRIVSDSHIDL*KMSKASFLRAASAS
Trigger: GGAAGCACTTGCTGCCCTAAGAAACGATGCCTTCGACATTTTCAAAAGATCTATGTGGCTGTCTGAAACAATGCGGAGAGCAGATAGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR TCA 90 bp TTCAATACTCTTCTTAATATATTTGCCATTCCCCAGATTCCTGAATCCACTTCCGCAGCAGGGATTATCTaGACCGTGTGGGAGCCAGGG +
Preference number: 2 (lower is better)
Translates to: FNTLLNIFAIPQIPESTSAAGII*TVWEPG
Trigger: CCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGC...GGAAGTGGATTCAGGAATCTGGGGAATGGCAAATATATTAAGAAGAGTATTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR-3UTR TCA 90 bp GGGGGAAAGCGCTTATGTTATGATGCAACGCCAACAGCAGTCACTCTTTGGTTCGGTGTTCCTTTACATTaGGACTTGAGATATCTCGTG +
Preference number: 2 (lower is better)
Translates to: GGKRLCYDATPTAVTLWFGVPLH*DLRYLV
Trigger: CACGAGATATCTCAAGTCTCAATGTAAAGGAACACC...GAACCAAAGAGTGACTGCTGTTGGCGTTGCATCATAACATAAGCGCTTTCCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR GCA 90 bp CCAATACCAACATCAGCCAGAAAATATCTGCTGTCCATTAGTGGCACTTCAAGTGCCATTGGTGTTGGATaGATGCCGGAGTGTATGCAG +
Preference number: 2 (lower is better)
Translates to: PIPTSARKYLLSISGTSSAIGVG*MPECMQ
Trigger: CTGCATACACTCCGGCATGCATCCAACACCAATGGC...ACTTGAAGTGCCACTAATGGACAGCAGATATTTTCTGGCTGATGTTGGTATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR-3UTR GCA 90 bp AAATACAAAGAGATTTCCAAAGTTGCTGGAGACCCCTGGGCGAACATTTCAATCGCCATTGGTGTTGGATaGATGCCGGAGTGTATGCAG +
Preference number: 2 (lower is better)
Translates to: KYKEISKVAGDPWANISIAIGVG*MPECMQ
Trigger: CTGCATACACTCCGGCATGCATCCAACACCAATGGC...GATTGAAATGTTCGCCCAGGGGTCTCCAGCAACTTTGGAAATCTCTTTGTATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR-3UTR GCA 90 bp TTCAATACTCTTCTTAATATATTTGCCATTCCCCAGATTCCTGAATCCACTTCCTGCCCCAGGGCTAAATaGAACACCAGGGCCCCTGCT +
Preference number: 2 (lower is better)
Translates to: FNTLLNIFAIPQIPESTSCPRAK*NTRAPA
Trigger: AGCAGGGGCCCTGGTGTTGCATTTAGCCCTGGGGCA...GGAAGTGGATTCAGGAATCTGGGGAATGGCAAATATATTAAGAAGAGTATTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR-3UTR GCA 90 bp AAAATGTCGAAGGCATCGTTTCTTAGGGCAGCAAGTGCTTCCTCATGCCTCCTAGAGTCATACCCTATGTaGATGGCATTCAGACTTCTC +
Preference number: 2 (lower is better)
Translates to: KMSKASFLRAASASSCLLESYPM*MAFRLL
Trigger: GAGAAGTCTGAATGCCATGCACATAGGGTATGACTC...TAGGAGGCATGAGGAAGCACTTGCTGCCCTAAGAAACGATGCCTTCGACATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR CCA 90 bp ACAGCTCTAAACACACACACTGACGATGGGTTTGGAACATGGCAGCATTTACATGCCTTGGAATCCCTTTaGCTGTTCCCAACAGAAGAC +
Preference number: 2 (lower is better)
Translates to: TALNTHTDDGFGTWQHLHALESL*LFPTED
Trigger: GTCTTCTGTTGGGAACAGCCAAAGGGATTCCAAGGC...ATGTAAATGCTGCCATGTTCCAAACCCATCGTCAGTGTGTGTGTTTAGAGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR CAA 90 bp AGTAACATAGCAAGGGGGAAAGAGAGCTGTTACAAAGATTTAGCCTaGGAATCCCTTTGGCTGTTCCCAACAGAAGACAGAAGATGTGCC +
Preference number: 2 (lower is better)
Translates to: SNIARGKESCYKDLA*ESLWLFPTEDRRCA
Trigger: GGCACATCTTCTGTCTTCTGTTGGGAACAGCCAAAGGGATTCCAAGGCTAAATCTTTGTAACAGCTCTCTTTCCCCCTTGCTATGTTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR CAA 90 bp GTTATGATGCAACGCCAACAGCAGTCACTCTTTGGTTCCCAAATATaGCGTCTATCTGCTCTCCGCATTGTTTCAGACAGCCACATAGAT +
Preference number: 2 (lower is better)
Translates to: VMMQRQQQSLFGSQI*RLSALRIVSDSHID
Trigger: ATCTATGTGGCTGTCTGAAACAATGCGGAGAGCAGATAGACGCAATATTTGGGAACCAAAGAGTGACTGCTGTTGGCGTTGCATCATAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR TCA 90 bp TTTAAAAAGTGCTTATCAGAGGCAAAATGTCTACTCTCCAGGCCTGGGTCTCTAATGCACAGAGTTATCTaGGCCCCAACCCATAGACTG +
Preference number: 2 (lower is better)
Translates to: FKKCLSEAKCLLSRPGSLMHRVI*APTHRL
Trigger: CAGTCTATGGGTTGGGGCTCAGATAACTCTGTGCAT...TAGAGACCCAGGCCTGGAGAGTAGACATTTTGCCTCTGATAAGCACTTTTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR-3UTR TCA 90 bp AAATACAAAGAGATTTCCAAAGTTGCTGGAGACCCCTGGGCGAACATTTCAATCCATGCATCACCACAGTaGACAGTTCACCCCTGTGTA +
Preference number: 2 (lower is better)
Translates to: KYKEISKVAGDPWANISIHASPQ*TVHPCV
Trigger: TACACAGGGGTGAACTGTTCACTGTGGTGATGCATG...GATTGAAATGTTCGCCCAGGGGTCTCCAGCAACTTTGGAAATCTCTTTGTATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR-3UTR TCA 90 bp CCTAACTTGATTCTGGAAACTTGTCTCCTGAACCATATATCCAGGAAACACTGGATTTTGGGACAGAGATaGAGCAACTCCTGGGCAGCT +
Preference number: 2 (lower is better)
Translates to: PNLILETCLLNHISRKHWILGQR*SNSWAA
Trigger: AGCTGCCCAGGAGTTGCTTCATCTCTGTCCCAAAAT...CCAGTGTTTCCTGGATATATGGTTCAGGAGACAAGTTTCCAGAATCAAGTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR TCA 90 bp GGGGGAAAGCGCTTATGTTATGATGCAACGCCAACAGCAGTCACTCTTTGGTTCCAAAGCAAATGCTTATaGTGGTCTAGCTGGTACTTT +
Preference number: 2 (lower is better)
Translates to: GGKRLCYDATPTAVTLWFQSKCL*WSSWYF
Trigger: AAAGTACCAGCTAGACCATCATAAGCATTTGCTTTG...GAACCAAAGAGTGACTGCTGTTGGCGTTGCATCATAACATAAGCGCTTTCCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR GCA 90 bp TCTACTGAACCCTGGTGCACACCCAGAATTAACCATTTTCCTCCAAATACTTTCGCATGCCGGAGTGTATaGAGGAGACAGAATTTGGCT +
Preference number: 2 (lower is better)
Translates to: STEPWCTPRINHFPPNTFACRSV*RRQNLA
Trigger: AGCCAAATTCTGTCTCCTGCATACACTCCGGCATGC...GAAAGTATTTGGAGGAAAATGGTTAATTCTGGGTGTGCACCAGGGTTCAGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR-3UTR GCA 90 bp AAATACAAAGAGATTTCCAAAGTTGCTGGAGACCCCTGGGCGAACATTTCAATCAAGATCCAAGTACAGTaGCCACTGGAACAGGTCCTG +
Preference number: 2 (lower is better)
Translates to: KYKEISKVAGDPWANISIKIQVQ*PLEQVL
Trigger: CAGGACCTGTTCCAGTGGGCACTGTACTTGGATCTT...GATTGAAATGTTCGCCCAGGGGTCTCCAGCAACTTTGGAAATCTCTTTGTATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR-3UTR GCA 90 bp AAAGGCATGGGCTATGGCTTGGTTAAACATATCTGCAAGGTTACTAGGGAAATCCAACACCAGGGCCCCTaGTCCTTTCAACTACCATTT +
Preference number: 2 (lower is better)
Translates to: KGMGYGLVKHICKVTREIQHQGP*SFQLPF
Trigger: AAATGGTAGTTGAAAGGAGCAGGGGCCCTGGTGTTG...GATTTCCCTAGTAACCTTGCAGATATGTTTAACCAAGCCATAGCCCATGCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR-3UTR GCA 90 bp TCTACTGAACCCTGGTGCACACCCAGAATTAACCATTTTCCTCCAAATACTTTCCAACACCAGGGCCCCTaGTCCTTTCAACTACCATTT +
Preference number: 2 (lower is better)
Translates to: STEPWCTPRINHFPPNTFQHQGP*SFQLPF
Trigger: AAATGGTAGTTGAAAGGAGCAGGGGCCCTGGTGTTG...GAAAGTATTTGGAGGAAAATGGTTAATTCTGGGTGTGCACCAGGGTTCAGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR-3UTR CCA 90 bp ACAGCTCTAAACACACACACTGACGATGGGTTTGGAACATGGCAGCATTTACATGAAAGCCATTGGTGTTaGATGCATGCCGGAGTGTAT +
Preference number: 2 (lower is better)
Translates to: TALNTHTDDGFGTWQHLHESHWC*MHAGVY
Trigger: ATACACTCCGGCATGCATCCAACACCAATGGCTTTC...ATGTAAATGCTGCCATGTTCCAAACCCATCGTCAGTGTGTGTGTTTAGAGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR-3UTR CCA 90 bp AAAGGCATGGGCTATGGCTTGGTTAAACATATCTGCAAGGTTACTAGGGAAATCGAGCTAGTTGATTTGTaGTCTCCAGGGCAGAAGTGG +
Preference number: 2 (lower is better)
Translates to: KGMGYGLVKHICKVTREIELVDL*SPGQKW
Trigger: CCACTTCTGCCCTGGAGACCACAAATCAACTAGCTC...GATTTCCCTAGTAACCTTGCAGATATGTTTAACCAAGCCATAGCCCATGCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR-3UTR CCA 90 bp AAAATGTCGAAGGCATCGTTTCTTAGGGCAGCAAGTGCTTCCTCATGCCTCCTAACAGGTGTTGAGTGTTaGTTGCCAGGGCATATTTTA +
Preference number: 2 (lower is better)
Translates to: KMSKASFLRAASASSCLLTGVEC*LPGHIL
Trigger: TAAAATATGCCCTGGCAACCAACACTCAACACCTGT...TAGGAGGCATGAGGAAGCACTTGCTGCCCTAAGAAACGATGCCTTCGACATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR CCA 90 bp AAAATGTCGAAGGCATCGTTTCTTAGGGCAGCAAGTGCTTCCTCATGCCTCCTACATACCCTATGTGCATaGCATTCAGACTTCTCACAA +
Preference number: 2 (lower is better)
Translates to: KMSKASFLRAASASSCLLHTLCA*HSDFSQ
Trigger: TTGTGAGAAGTCTGAATGCCATGCACATAGGGTATG...TAGGAGGCATGAGGAAGCACTTGCTGCCCTAAGAAACGATGCCTTCGACATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR CAA 90 bp AAAGTTCATTTGCTCCAGTTGAGAGTAAGTTTTCAGGGGATTAACTaGGGAATGGTGCAGTGTAATCTAGATCACGCTCCCAAGACCTGC +
Preference number: 2 (lower is better)
Translates to: KVHLLQLRVSFQGIN*GMVQCNLDHAPKTC
Trigger: GCAGGTCTTGGGAGCGTGATCTAGATTACACTGCACCATTCCCAAGTTAATCCCCTGAAAACTTACTCTCAACTGGAGCAAATGAACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR CAA 90 bp ATCCCCACAGCATTCCTTCGAGGATACCAGAGATCAGTTCTTTGGTaGATACAAATGATAGTGACGAGAAGGGGGAAAGCGCTTATGTTA +
Preference number: 2 (lower is better)
Translates to: IPTAFLRGYQRSVLW*IQMIVTRRGKALML
Trigger: TAACATAAGCGCTTTCCCCCTTCTCGTCACTATCATTTGTATCAACCAAAGAACTGATCTCTGGTATCCTCGAAGGAATGCTGTGGGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR CAA 90 bp GAATATCCCCACAGCATTCCTTCGAGGATACCAGAGATCAGTTCTTaGGTTGATACAAATGATAGTGACGAGAAGGGGGAAAGCGCTTAT +
Preference number: 2 (lower is better)
Translates to: EYPHSIPSRIPEISS*VDTNDSDEKGESAY
Trigger: ATAAGCGCTTTCCCCCTTCTCGTCACTATCATTTGTATCAACCAAAGAACTGATCTCTGGTATCCTCGAAGGAATGCTGTGGGGATATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR TCA 90 bp TGCACAGCTCTAAACACACACACTGACGATGGGTTTGGAACATGGCAGCATTTAATAGGGGGAATGAATTaGCAATCACCAGATACTCTG +
Preference number: 2 (lower is better)
Translates to: CTALNTHTDDGFGTWQHLIGGMN*QSPDTL
Trigger: CAGAGTATCTGGTGATTGTCAATTCATTCCCCCTAT...TAAATGCTGCCATGTTCCAAACCCATCGTCAGTGTGTGTGTTTAGAGCTGTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR-3UTR TCA 90 bp TGCACAGCTCTAAACACACACACTGACGATGGGTTTGGAACATGGCAGCATTTATTCTCAGTCCTTTGGTaGTCACTTAACTGGACAATC +
Preference number: 2 (lower is better)
Translates to: CTALNTHTDDGFGTWQHLFSVLW*SLNWTI
Trigger: GATTGTCCAGTTAAGTGATCACCAAAGGACTGAGAA...TAAATGCTGCCATGTTCCAAACCCATCGTCAGTGTGTGTGTTTAGAGCTGTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR-3UTR GCA 90 bp CCATTGGTGTTGGATGCATGCCGGAGTGTATGCAGGAGACAGAATTTGGCTAAAATGATGAGGGTAAAATaGAGCAGGGATTATCTGAAC +
Preference number: 2 (lower is better)
Translates to: PLVLDACRSVCRRQNLAKMMRVK*SRDYLN
Trigger: GTTCAGATAATCCCTGCTGCATTTTACCCTCATCAT...TTTAGCCAAATTCTGTCTCCTGCATACACTCCGGCATGCATCCAACACCAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR-3UTR GCA 90 bp TTCAATACTCTTCTTAATATATTTGCCATTCCCCAGATTCCTGAATCCACTTCCACCCCCAAAGGGCAATaGGGGGTCTGCAAGGAATGT +
Preference number: 2 (lower is better)
Translates to: FNTLLNIFAIPQIPESTSTPKGQ*GVCKEC
Trigger: ACATTCCTTGCAGACCCCGCATTGCCCTTTGGGGGT...GGAAGTGGATTCAGGAATCTGGGGAATGGCAAATATATTAAGAAGAGTATTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR-3UTR CCA 90 bp AAATACAAAGAGATTTCCAAAGTTGCTGGAGACCCCTGGGCGAACATTTCAATCTCTACTCTCCAGGCCTaGGTCTCTACAAGTAGCTTA +
Preference number: 2 (lower is better)
Translates to: KYKEISKVAGDPWANISISTLQA*VSTSSL
Trigger: TAAGCTACTTGTAGAGACCCAGGCCTGGAGAGTAGA...GATTGAAATGTTCGCCCAGGGGTCTCCAGCAACTTTGGAAATCTCTTTGTATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR-3UTR CCA 90 bp AACTCTTGGGGACTTTTGAAGATAATGACGAGCATCCGCAGATGCTCTAAGGTTGGGCAGCTATTTACCTaGAAATTTGAAGGAGTGAGG +
Preference number: 2 (lower is better)
Translates to: NSWGLLKIMTSIRRCSKVGQLFT*KFEGVR
Trigger: CCTCACTCCTTCAAATTTCCAGGTAAATAGCTGCCC...AACCTTAGAGCATCTGCGGATGCTCGTCATTATCTTCAAAAGTCCCCAAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR CAA 90 bp GATCACGCTCCCAAGACCTGCACCAAAGAGAATTATGGTTGCCTTTaGAGCTACTGTATGACTCTATTTGCCTTTCACATAACTAGCTTC +
Preference number: 2 (lower is better)
Translates to: DHAPKTCTKENYGCL*SYCMTLFAFHITSF
Trigger: GAAGCTAGTTATGTGAAAGGCAAATAGAGTCATACAGTAGCTCAAAAGGCAACCATAATTCTCTTTGGTGCAGGTCTTGGGAGCGTGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR-3UTR TCA 90 bp CTGGCCTTCAGTTTTCTCATTTGCAAAGATGAGGGGTGCATTAATATCCTAAAACATTTTTCTCAGGAGTaGACAGGTCAATGGGCAGCC +
Preference number: 2 (lower is better)
Translates to: LAFSFLICKDEGCINILKHFSQE*TGQWAA
Trigger: GGCTGCCCATTGACCTGTTCACTCCTGAGAAAAATG...TTTTAGGATATTAATGCACCCCTCATCTTTGCAAATGAGAAAACTGAAGGCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR TCA 90 bp CACTCTTTGGTTCCCAAATATTGCGTCTATCTGCTCTCCGCATTGTTTCAGACATGGAAACTTGTCTCCTaGACCATATATCCAGGAAAC +
Preference number: 2 (lower is better)
Translates to: HSLVPKYCVYLLSALFQTWKLVS*TIYPGN
Trigger: GTTTCCTGGATATATGGTTCAGGAGACAAGTTTCCA...TGTCTGAAACAATGCGGAGAGCAGATAGACGCAATATTTGGGAACCAAAGAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR TCA 90 bp AACTCTTGGGGACTTTTGAAGATAATGACGAGCATCCGCAGATGCTCTAAGGTTCTCACAAGAATCCCATaGCATGGCTATATTCCCAAT +
Preference number: 2 (lower is better)
Translates to: NSWGLLKIMTSIRRCSKVLTRIP*HGYIPN
Trigger: ATTGGGAATATAGCCATGTCATGGGATTCTTGTGAG...AACCTTAGAGCATCTGCGGATGCTCGTCATTATCTTCAAAAGTCCCCAAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR GCA 90 bp GTTTCTGCCCTACTTTCCCTCTTGTTCTCTAGTAGCCACAACAATCCTGCACAAATGATGAGGGTAAAATaGAGCAGGGATTATCTGAAC +
Preference number: 2 (lower is better)
Translates to: VSALLSLLFSSSHNNPAQMMRVK*SRDYLN
Trigger: GTTCAGATAATCCCTGCTGCATTTTACCCTCATCAT...TTGTGCAGGATTGTTGTGGCTACTAGAGAACAAGAGGGAAAGTAGGGCAGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR-3UTR GCA 90 bp CTTTCCCTCTTGTTCTCTAGTAGCCACAACAATCCTGCACAAGTACTGTTCAGCCATAAAAGGATGCATTaGCATAGGAATACAAGAGGG +
Preference number: 2 (lower is better)
Translates to: LSLLFSSSHNNPAQVLFSHKRMH*HRNTRG
Trigger: CCCTCTTGTATTCCTATGGCAATGCATCCTTTTATG...GCTGAACAGTACTTGTGCAGGATTGTTGTGGCTACTAGAGAACAAGAGGGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR-3UTR GCA 90 bp ATTCCTTCGAGGATACCAGAGATCAGTTCTTTGGTTGATACAAATGATAGTGACGCACAGTGTTCACTTTaGTACTCAGGTGGGACTGGA +
Preference number: 2 (lower is better)
Translates to: IPSRIPEISSLVDTNDSDAQCSL*YSGGTG
Trigger: TCCAGTCCCACCTGAGTAGCAAAGTGAACACTGTGC...GTCACTATCATTTGTATCAACCAAAGAACTGATCTCTGGTATCCTCGAAGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR CCA 90 bp TCTTTGGTTCCCAAATATTGCGTCTATCTGCTCTCCGCATTGTTTCAGACAGCCTTGATCCAAAGTTTGTaGGTAGCTATCCTATCCTTC +
Preference number: 2 (lower is better)
Translates to: SLVPKYCVYLLSALFQTALIQSL*VAILSF
Trigger: GAAGGATAGGATAGCTACCCACAAACTTTGGATCAA...GGCTGTCTGAAACAATGCGGAGAGCAGATAGACGCAATATTTGGGAACCAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR TCA 90 bp CCAATACCAACATCAGCCAGAAAATATCTGCTGTCCATTAGTGGCACTTCAAGTAGCTTTCAGCACATCTaGATCTGCAGTGTATCAAGT +
Preference number: 2 (lower is better)
Translates to: PIPTSARKYLLSISGTSSSFQHI*ICSVSS
Trigger: ACTTGATACACTGCAGATTCAGATGTGCTGAAAGCT...ACTTGAAGTGCCACTAATGGACAGCAGATATTTTCTGGCTGATGTTGGTATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR-3UTR TCA 90 bp TCTACTGAACCCTGGTGCACACCCAGAATTAACCATTTTCCTCCAAATACTTTCTTAAAAAGAACCCACTaGCCCATTAGCTACTGTCCA +
Preference number: 2 (lower is better)
Translates to: STEPWCTPRINHFPPNTFLKRTH*PISYCP
Trigger: TGGACAGTAGCTAATGGGTCAGTGGGTTCTTTTTAA...GAAAGTATTTGGAGGAAAATGGTTAATTCTGGGTGTGCACCAGGGTTCAGTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR-3UTR TCA 90 bp ATTCCTTCGAGGATACCAGAGATCAGTTCTTTGGTTGATACAAATGATAGTGACCTGCTGAAGGGCCATTaGTGGGTAGAAGCCTTTAAA +
Preference number: 2 (lower is better)
Translates to: IPSRIPEISSLVDTNDSDLLKGH*WVEAFK
Trigger: TTTAAAGGCTTCTACCCATCAATGGCCCTTCAGCAG...GTCACTATCATTTGTATCAACCAAAGAACTGATCTCTGGTATCCTCGAAGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR TCA 90 bp CCTACATATGAATTGATGCCAATAGGTACTGAACACCTACTAAATTTAGGCCCTTTCTCTGTTGCTATTTaGGGTAGGCCTTCCTGGTGT +
Preference number: 2 (lower is better)
Translates to: PTYELMPIGTEHLLNLGPFSVAI*GRPSWC
Trigger: ACACCAGGAAGGCCTACCTCAAATAGCAACAGAGAA...AGGGCCTAAATTTAGTAGGTGTTCAGTACCTATTGGCATCAATTCATATGTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR GCA 90 bp ACAGCTCTAAACACACACACTGACGATGGGTTTGGAACATGGCAGCATTTACATAGGAATACAAGAGGGTaGTATAATAAACCCTTGACC +
Preference number: 2 (lower is better)
Translates to: TALNTHTDDGFGTWQHLHRNTRG*YNKPLT
Trigger: GGTCAAGGGTTTATTATAGCACCCTCTTGTATTCCT...ATGTAAATGCTGCCATGTTCCAAACCCATCGTCAGTGTGTGTGTTTAGAGCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR-3UTR CCA 90 bp TTCAATACTCTTCTTAATATATTTGCCATTCCCCAGATTCCTGAATCCACTTCCGCCTTGGAATCCCTTTaGCTGTTCCCAACAGAAGAC +
Preference number: 2 (lower is better)
Translates to: FNTLLNIFAIPQIPESTSALESL*LFPTED
Trigger: GTCTTCTGTTGGGAACAGCCAAAGGGATTCCAAGGC...GGAAGTGGATTCAGGAATCTGGGGAATGGCAAATATATTAAGAAGAGTATTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR-3UTR CCA 90 bp AACTCTTGGGGACTTTTGAAGATAATGACGAGCATCCGCAGATGCTCTAAGGTTATATCCAGGAAACACTaGGTTTCAAAGACAAGACAC +
Preference number: 2 (lower is better)
Translates to: NSWGLLKIMTSIRRCSKVISRKH*VSKTRH
Trigger: GTGTCTTGTCTTTGAAACCCAGTGTTTCCTGGATAT...AACCTTAGAGCATCTGCGGATGCTCGTCATTATCTTCAAAAGTCCCCAAGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR TCA 90 bp CCAATACCAACATCAGCCAGAAAATATCTGCTGTCCATTAGTGGCACTTCAAGTCCCCAAACCAAACCCTaGTTTTGGATTATCTCTAAA +
Preference number: 2 (lower is better)
Translates to: PIPTSARKYLLSISGTSSPQTKP*FWIISK
Trigger: TTTAGAGATAATCCAAAATCAGGGTTTGGTTTGGGG...ACTTGAAGTGCCACTAATGGACAGCAGATATTTTCTGGCTGATGTTGGTATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR-3UTR TCA 90 bp ACAGCTCTAAACACACACACTGACGATGGGTTTGGAACATGGCAGCATTTACATAAGCAGATCTGCCTGTaGATATTAGACATTACTATG +
Preference number: 2 (lower is better)
Translates to: TALNTHTDDGFGTWQHLHKQICL*ILDITM
Trigger: CATAGTAATGTCTAATATTCACAGGCAGATCTGCTT...ATGTAAATGCTGCCATGTTCCAAACCCATCGTCAGTGTGTGTGTTTAGAGCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR-3UTR GCA 90 bp TGCACAGCTCTAAACACACACACTGACGATGGGTTTGGAACATGGCAGCATTTAAAAGAGAATTATGGTTaGCTTTTGAGCTACTGTATG +
Preference number: 2 (lower is better)
Translates to: CTALNTHTDDGFGTWQHLKENYG*LLSYCM
Trigger: CATACAGTAGCTCAAAAGGCAACCATAATTCTCTTT...TAAATGCTGCCATGTTCCAAACCCATCGTCAGTGTGTGTGTTTAGAGCTGTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR-3UTR CCA 90 bp TATGGTTGCCTTTTGAGCTACTGTATGACTCTATTTGCCTTTCACATAACTAGCGCATGGGCTATGGCTTaGTTAAACATATCTGCAAGG +
Preference number: 2 (lower is better)
Translates to: YGCLLSYCMTLFAFHITSAWAMA*LNISAR
Trigger: CCTTGCAGATATGTTTAACCAAGCCATAGCCCATGC...GCTAGTTATGTGAAAGGCAAATAGAGTCATACAGTAGCTCAAAAGGCAACCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR-3UTR CCA 90 bp ACAGCTCTAAACACACACACTGACGATGGGTTTGGAACATGGCAGCATTTACATACGCTACTGAAAAGATaGATATTTGGGACCAAAGTT +
Preference number: 2 (lower is better)
Translates to: TALNTHTDDGFGTWQHLHTLLKR*IFGTKV
Trigger: AACTTTGGTCCCAAATATCCATCTTTTCAGTAGCGT...ATGTAAATGCTGCCATGTTCCAAACCCATCGTCAGTGTGTGTGTTTAGAGCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR-3UTR CCA 90 bp CCTACATATGAATTGATGCCAATAGGTACTGAACACCTACTAAATTTAGGCCCTAGATGGAATGAGAAGTaGCAAATGACTGGCCGAAAC +
Preference number: 2 (lower is better)
Translates to: PTYELMPIGTEHLLNLGPRWNEK*QMTGRN
Trigger: GTTTCGGCCAGTCATTTGCCACTTCTCATTCCATCT...AGGGCCTAAATTTAGTAGGTGTTCAGTACCTATTGGCATCAATTCATATGTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR TCA 90 bp TATGGTTGCCTTTTGAGCTACTGTATGACTCTATTTGCCTTTCACATAACTAGCGCTATAATAAACCCTTaGCCTAGCTTTCTCCAAGTC +
Preference number: 2 (lower is better)
Translates to: YGCLLSYCMTLFAFHITSAIINP*PSFLQV
Trigger: GACTTGGAGAAAGCTAGGTCAAGGGTTTATTATAGC...GCTAGTTATGTGAAAGGCAAATAGAGTCATACAGTAGCTCAAAAGGCAACCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR-3UTR GCA 90 bp CTGGCCTTCAGTTTTCTCATTTGCAAAGATGAGGGGTGCATTAATATCCTAAAACCATGGTCATGTAACTaGCTCAAAACAAAATGTCCC +
Preference number: 2 (lower is better)
Translates to: LAFSFLICKDEGCINILKPWSCN*LKTKCP
Trigger: GGGACATTTTGTTTTGAGGCAGTTACATGACCATGG...TTTTAGGATATTAATGCACCCCTCATCTTTGCAAATGAGAAAACTGAAGGCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR GCA 90 bp CACTCTTTGGTTCCCAAATATTGCGTCTATCTGCTCTCCGCATTGTTTCAGACACACACTTTAGAAGCATaGTTTCAAAGCAAATGCTTA +
Preference number: 2 (lower is better)
Translates to: HSLVPKYCVYLLSALFQTHTLEA*FQSKCL
Trigger: TAAGCATTTGCTTTGAAAGCATGCTTCTAAAGTGTG...TGTCTGAAACAATGCGGAGAGCAGATAGACGCAATATTTGGGAACCAAAGAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR TCA 90 bp TTCAATACTCTTCTTAATATATTTGCCATTCCCCAGATTCCTGAATCCACTTCCAGCTTTCAGCACATCTaGATCTGCAGTGTATCAAGT +
Preference number: 2 (lower is better)
Translates to: FNTLLNIFAIPQIPESTSSFQHI*ICSVSS
Trigger: ACTTGATACACTGCAGATTCAGATGTGCTGAAAGCT...GGAAGTGGATTCAGGAATCTGGGGAATGGCAAATATATTAAGAAGAGTATTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR CAA 90 bp CTAACCTTATCGCCATTAATTCTTCAAAACACTACTGCAACTGAGTaGAAATTGACAGCTAGAAAGATTTCACTCCAATTTCCAGCAAGG +
Preference number: 2 (lower is better)
Translates to: LTLSPLILQNTTATE*KLTARKISLQFPAR
Trigger: CCTTGCTGGAAATTGGAGTGAAATCTTTCTAGCTGTCAATTTCAACTCAGTTGCAGTAGTGTTTTGAAGAATTAATGGCGATAAGGTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR TCA 90 bp ATTCCTTCGAGGATACCAGAGATCAGTTCTTTGGTTGATACAAATGATAGTGACGGCTGTCATGATTTATaGTTCAATGGTTTGCCATTT +
Preference number: 2 (lower is better)
Translates to: IPSRIPEISSLVDTNDSDGCHDL*FNGLPF
Trigger: AAATGGCAAACCATTGAATCATAAATCATGACAGCC...GTCACTATCATTTGTATCAACCAAAGAACTGATCTCTGGTATCCTCGAAGGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR GCA 72 bp CAGCAACGGTCCCCACCCTTCTCCCGTGCCCCAGGGTaGTGGGCCAATTGTAGGAACACAGCTGTCTACAGC +
Preference number: 3 (lower is better)
Translates to: QQRSPPFSRAPG*WANCRNTAVYS
Trigger: GCTGTAGACAGCTGTGTTCCTACAATTGGCCCAGCACCCTGGGGCACGGGAGAAGGGTGGGGACCGTTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR CCA 72 bp CAACGGTCCCCACCCTTCTCCCGTGCCCCAGGGTGCTaGGCCAATTGTAGGAACACAGCTGTCTACAGCAGC +
Preference number: 3 (lower is better)
Translates to: QRSPPFSRAPGC*ANCRNTAVYSS
Trigger: GCTGCTGTAGACAGCTGTGTTCCTACAATTGGCCCAGCACCCTGGGGCACGGGAGAAGGGTGGGGACCGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR TCA 72 bp AAGGGCATACGTAATCTGACCAGGCCCCAGTCAGCCTaGGTAGTGACAGCAACGGTCCCCACCCTTCTCCCG +
Preference number: 3 (lower is better)
Translates to: KGIRNLTRPQSA*VVTATVPTLLP
Trigger: CGGGAGAAGGGTGGGGACCGTTGCTGTCACTACTCAGGCTGACTGGGGCCTGGTCAGATTACGTATGCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR CCA 72 bp AAGGAATGCGATGAAGTAGAGCCCGCAGTGGCCAAGTaGCTTTGGTCCGTCTCCTCCACGGATGCCCCTCCA +
Preference number: 3 (lower is better)
Translates to: KECDEVEPAVAK*LWSVSSTDAPP
Trigger: TGGAGGGGCATCCGTGGAGGAGACGGACCAAAGCCACTTGGCCACTGCGGGCTCTACTTCATCGCATTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456483.3
3UTR GCA 72 bp GCCACAACAATCCTGCACAAGTACTGTTCAGCTCCATaGCCCAGGGCTAAATGCAACACCAGGGCCCCTGCT +
Preference number: 3 (lower is better)
Translates to: ATTILHKYCSAP*PRAKCNTRAPA
Trigger: AGCAGGGGCCCTGGTGTTGCATTTAGCCCTGGGGCATGGAGCTGAACAGTACTTGTGCAGGATTGTTGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR CCA 72 bp AGCTGTGACAGCTGCTTCTTCCAACCAGGGCCACGCTaGGAAATGAAGAAGAGCTGGACTACCCCAGGGATC +
Preference number: 3 (lower is better)
Translates to: SCDSCFFQPGPR*EMKKSWTTPGI
Trigger: GATCCCTGGGGTAGTCCAGCTCTTCTTCATTTCCCAGCGTGGCCCTGGTTGGAAGAAGCAGCTGTCACAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR GCA 72 bp GTAAGGCACACACACGCCGGGAAGATCCAAGTACAGTaGCCACTGGAACAGGTCCTGAAGCTGACCTTACTG +
Preference number: 3 (lower is better)
Translates to: VRHTHAGKIQVQ*PLEQVLKLTLL
Trigger: CAGTAAGGTCAGCTTCAGGACCTGTTCCAGTGGGCACTGTACTTGGATCTTCCCGGCGTGTGTGTGCCTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR GCA 72 bp GCAGCAAGTGCTTCCTCATGCCTCCTAACAGGGCTTTaGAGCTGGGACAGCCACATTCTCACTACGACACTC +
Preference number: 3 (lower is better)
Translates to: AASASSCLLTGL*SWDSHILTTTL
Trigger: GAGTGTCGTAGTGAGAATGTGGCTGTCCCAGCTGCAAAGCCCTGTTAGGAGGCATGAGGAAGCACTTGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR GCA 72 bp AAGGCATCGTTTCTTAGGGCAGCAAGTGCTTCCTCATaGCTCCTAACAGGGCTTTGCAGCTGGGACAGCCAC +
Preference number: 3 (lower is better)
Translates to: KASFLRAASASS*LLTGLCSWDSH
Trigger: GTGGCTGTCCCAGCTGCAAAGCCCTGTTAGGAGGCATGAGGAAGCACTTGCTGCCCTAAGAAACGATGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR CCA 72 bp AGTGCTTCCTCATGCCTCCTAACAGGGCTTTGCAGCTaGGACAGCCACATTCTCACTACGACACTCGCAAGG +
Preference number: 3 (lower is better)
Translates to: SASSCLLTGLCS*DSHILTTTLAR
Trigger: CCTTGCGAGTGTCGTAGTGAGAATGTGGCTGTCCCAGCTGCAAAGCCCTGTTAGGAGGCATGAGGAAGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR CAA 90 bp CCCTGTGTAAGGCACACACACGCCGGGAAGATCCAAGTACAGTGCCCACTGGAAAGAAAGCCATTGGTGTaGGATGCATGCCGGAGTGTA +
Preference number: 3 (lower is better)
Translates to: PCVRHTHAGKIQVQCPLERKPLV*DACRSV
Trigger: TACACTCCGGCATGCATCCAACACCAATGGCTTTCT...TTCCAGTGGGCACTGTACTTGGATCTTCCCGGCGTGTGTGTGCCTTACACAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR-3UTR CAA 90 bp AAAATGTCGAAGGCATCGTTTCTTAGGGCAGCAAGTGCTTCCTCATGCCTCCTACGTCGGTACCTCTGTTaGGGGCACACCCAACCCCGA +
Preference number: 3 (lower is better)
Translates to: KMSKASFLRAASASSCLLRRYLC*GHTQPR
Trigger: TCGGGGTTGGGTGTGCCCCAAACAGAGGTACCGACG...TAGGAGGCATGAGGAAGCACTTGCTGCCCTAAGAAACGATGCCTTCGACATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR TCA 72 bp GGCCTGCCTTGGCCATCAGGTGGATCAAAGTGTCTGTaGTCTTGTCCAGGACTCGGTGGATATGGTCCTTCT +
Preference number: 3 (lower is better)
Translates to: GLPWPSGGSKCL*SCPGLGGYGPS
Trigger: AGAAGGACCATATCCACCGAGTCCTGGACAAGATCACAGACACTTTGATCCACCTGATGGCCAAGGCAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456483.3
3UTR GCA 72 bp TGTAGGAACACAGCTGTCTACAGCAGCTGTGACAGCTaGTTCTTCCAACCAGGGCCACGCTGGGAAATGAAG +
Preference number: 3 (lower is better)
Translates to: CRNTAVYSSCDS*FFQPGPRWEMK
Trigger: CTTCATTTCCCAGCGTGGCCCTGGTTGGAAGAAGCAGCTGTCACAGCTGCTGTAGACAGCTGTGTTCCTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR CCA 72 bp ACATTCTTGGGCTTCGTTACCGTCGGTACCTCTGTTTaGGGCACACCCAACCCCGAGAATGAAAGGCAGAGT +
Preference number: 3 (lower is better)
Translates to: TFLGFVTVGTSV*GTPNPENERQS
Trigger: ACTCTGCCTTTCATTCTCGGGGTTGGGTGTGCCCCAAACAGAGGTACCGACGGTAACGAAGCCCAAGAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR CAA 90 bp TGCAAGGAATGCGATGAAGTAGAGCCCGCAGTGGCCAAGTGGCTTTGGTCCGTCAGATGCTCCATGCCTTaGTTACTCATGTGCCTGATG +
Preference number: 3 (lower is better)
Translates to: CKECDEVEPAVAKWLWSVRCSMP*LLMCLM
Trigger: CATCAGGCACATGAGTAACAAAGGCATGGAGCATCT...GACGGACCAAAGCCACTTGGCCACTGCGGGCTCTACTTCATCGCATTCCTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456483.3
3UTR TCA 72 bp CTCCTCTCCCTGCAGATTCATCATGCGGAACCGAGATaGTGTAGCCAGCAGCATGTCGAAGATCTCCACCAT +
Preference number: 3 (lower is better)
Translates to: LLSLQIHHAEPR*CSQQHVEDLHH
Trigger: ATGGTGGAGATCTTCGACATGCTGCTGGCTACATCATCTCGGTTCCGCATGATGAATCTGCAGGGAGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456483.3
3UTR TCA 72 bp CTCCCCCGTGATGTAATACTTTTGCAAGGAATGCGATaGAGTAGAGCCCGCAGTGGCCAAGTGGCTTTGGTC +
Preference number: 3 (lower is better)
Translates to: LPRDVILLQGMR*SRARSGQVALV
Trigger: GACCAAAGCCACTTGGCCACTGCGGGCTCTACTTCATCGCATTCCTTGCAAAAGTATTACATCACGGGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456483.3
3UTR-3UTR CAA 90 bp CCCTGTGTAAGGCACACACACGCCGGGAAGATCCAAGTACAGTGCCCACTGGAATGCAGGAGACAGAATTaGGCTAAAGTGGTGCATGAT +
Preference number: 3 (lower is better)
Translates to: PCVRHTHAGKIQVQCPLECRRQN*AKVVHD
Trigger: ATCATGCACCACTTTAGCCAAATTCTGTCTCCTGCA...TTCCAGTGGGCACTGTACTTGGATCTTCCCGGCGTGTGTGTGCCTTACACAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR-3UTR CAA 90 bp TTTCCAAACAAGACATACCAAGAGAAGCCCGAGCAGCTCACCTGGGTCATTGGCTCATCTAGAAAGCCATaGGTGTTGGATGCATGCCGG +
Preference number: 3 (lower is better)
Translates to: FPNKTYQEKPEQLTWVIGSSRKP*VLDACR
Trigger: CCGGCATGCATCCAACACCAATGGCTTTCTAGATGA...GCCAATGACCCAGGTGAGCTGCTCGGGCTTCTCTTGGTATGTCTTGTTTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR CCA 72 bp CAACACCTTCACAGACAGGTTGTGGTTGAACATTCTTaGGCTTCGTTACCGTCGGTACCTCTGTTTGGGGCA +
Preference number: 3 (lower is better)
Translates to: QHLHRQVVVEHS*ASLPSVPLFGA
Trigger: TGCCCCAAACAGAGGTACCGACGGTAACGAAGCCCAAGAATGTTCAACCACAACCTGTCTGTGAAGGTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR CAA 90 bp ACCCCGAGAATGAAAGGCAGAGTCTGCTGGGGAAGAATGAACTTCACCCACAGTGACCTGGGTCCTAACTaGATTCTGGAAACTTGTCTC +
Preference number: 3 (lower is better)
Translates to: TPRMKGRVCWGRMNFTHSDLGPN*ILETCL
Trigger: GAGACAAGTTTCCAGAATCAAGTTAGGACCCAGGTC...ACTGTGGGTGAAGTTCATTCTTCCCCAGCAGACTCTGCCTTTCATTCTCGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR TCA 72 bp TCAACTACCATTTACCCTCATCATGCATCACCACAGTaGACAGTTCACCCCTGTGTAAGGCACACACACGCC +
Preference number: 3 (lower is better)
Translates to: STTIYPHHASPQ*TVHPCVRHTHA
Trigger: GGCGTGTGTGTGCCTTACACAGGGGTGAACTGTTCACTGTGGTGATGCATGATGAGGGTAAATGGTAGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR CCA 72 bp GTGGTCTCCAGGGCAGAAGTGGACTCTACTGAACCCTaGTGCACACCCAGAATTAACCATTTTCCTCCAAAT +
Preference number: 3 (lower is better)
Translates to: VVSRAEVDSTEP*CTPRINHFPPN
Trigger: ATTTGGAGGAAAATGGTTAATTCTGGGTGTGCACCAGGGTTCAGTAGAGTCCACTTCTGCCCTGGAGACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR CCA 72 bp ATGGAGCTAGTTGATTTGTGGTCTCCAGGGCAGAAGTaGACTCTACTGAACCCTGGTGCACACCCAGAATTA +
Preference number: 3 (lower is better)
Translates to: MELVDLWSPGQK*TLLNPGAHPEL
Trigger: TAATTCTGGGTGTGCACCAGGGTTCAGTAGAGTCCACTTCTGCCCTGGAGACCACAAATCAACTAGCTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR CCA 72 bp GAATGCAAAGGGGTCTGTGTCTCAGGCACCTGCTCATaGGACAATATGTTGTTTCTAGGGTGCACAGCTCTA +
Preference number: 3 (lower is better)
Translates to: ECKGVCVSGTCS*DNMLFLGCTAL
Trigger: TAGAGCTGTGCACCCTAGAAACAACATATTGTCCCATGAGCAGGTGCCTGAGACACAGACCCCTTTGCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR-3UTR CAA 90 bp TGCACAGCTCTAAACACACACACTGACGATGGGTTTGGAACATGGCAGCATTTAAGCTCACCTGGGTCATaGGCTAACACAGACATCACC +
Preference number: 3 (lower is better)
Translates to: CTALNTHTDDGFGTWQHLSSPGS*ANTDIT
Trigger: GGTGATGTCTGTGTTAGCCAATGACCCAGGTGAGCT...TAAATGCTGCCATGTTCCAAACCCATCGTCAGTGTGTGTGTTTAGAGCTGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR TCA 72 bp AAACGTCATCCAACACCTTCACAGACAGGTTGTGGTTaGACATTCTTGGGCTTCGTTACCGTCGGTACCTCT +
Preference number: 3 (lower is better)
Translates to: KRHPTPSQTGCG*TFLGFVTVGTS
Trigger: AGAGGTACCGACGGTAACGAAGCCCAAGAATGTTCAACCACAACCTGTCTGTGAAGGTGTTGGATGACGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR TCA 72 bp ATGATAGTGACGAGAAGGGGGAAAGCGCTTATGTTATaGTGCAACGCCAACAGCAGTCACTCTTTGGTTCCC +
Preference number: 3 (lower is better)
Translates to: MIVTRRGKALML*CNANSSHSLVP
Trigger: GGGAACCAAAGAGTGACTGCTGTTGGCGTTGCATCATAACATAAGCGCTTTCCCCCTTCTCGTCACTATCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR GCA 72 bp AGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATaGAGCAGGGATTATCTGAACCGTGTGGGAGCCAGG +
Preference number: 3 (lower is better)
Translates to: RIWLKWCMMRVK*SRDYLNRVGAR
Trigger: CCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
3UTR GCA 72 bp GGCCACTCATCTAGAAAGCCATTGGTGTTGGATGCATaGCGGAGTGTATGCAGGAGACAGAATTTGGCTAAA +
Preference number: 3 (lower is better)
Translates to: GHSSRKPLVLDA*RSVCRRQNLAK
Trigger: TTTAGCCAAATTCTGTCTCCTGCATACACTCCGGCATGCATCCAACACCAATGGCTTTCTAGATGAGTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR GCA 72 bp ATAGTCTTGCCAACTAGGGGATCTGCCTTCCCTGTGTaGCCCTTGTATTCCTATAGGGGGAATGAATTGACA +
Preference number: 3 (lower is better)
Translates to: IVLPTRGSAFPV*PLYSYRGNELT
Trigger: TGTCAATTCATTCCCCCTATAGGAATACAAGGGGCACACAGGGAAGGCAGATCCCCTAGTTGGCAAGACTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR GCA 72 bp GTCTCCAGGGCAGAAGTGGACTCTACTGAACCCTGGTaGACACCCAGAATTAACCATTTTCCTCCAAATACT +
Preference number: 3 (lower is better)
Translates to: VSRAEVDSTEPW*TPRINHFPPNT
Trigger: AGTATTTGGAGGAAAATGGTTAATTCTGGGTGTGCACCAGGGTTCAGTAGAGTCCACTTCTGCCCTGGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR GCA 72 bp AACGCCAACAGCAGTCACTCTTTGGTTCCCAAATATTaGGTCTATCTGCTCTCCGCATTGTTTCAGACAGCC +
Preference number: 3 (lower is better)
Translates to: NANSSHSLVPKY*VYLLSALFQTA
Trigger: GGCTGTCTGAAACAATGCGGAGAGCAGATAGACGCAATATTTGGGAACCAAAGAGTGACTGCTGTTGGCGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR CAA 90 bp CGAGAAGGGGGAAAGCGCTTATGTTATGATGCAACGCCAACAGCAGTCACTCTTGGTGTTGAGTGTTGGTaGCCAGGGCATATTTTAAAG +
Preference number: 3 (lower is better)
Translates to: REGGKRLCYDATPTAVTLGVECW*PGHILK
Trigger: CTTTAAAATATGCCCTGGCAACCAACACTCAACACC...AAGAGTGACTGCTGTTGGCGTTGCATCATAACATAAGCGCTTTCCCCCTTCTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR CAA 90 bp ACAGCTCTAAACACACACACTGACGATGGGTTTGGAACATGGCAGCATTTACATATGGAGCTAGTTGATTaGTGGTCTCCAGGGCAGAAG +
Preference number: 3 (lower is better)
Translates to: TALNTHTDDGFGTWQHLHMELVD*WSPGQK
Trigger: CTTCTGCCCTGGAGACCACAAATCAACTAGCTCCAT...ATGTAAATGCTGCCATGTTCCAAACCCATCGTCAGTGTGTGTGTTTAGAGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR-3UTR CAA 90 bp AACTCTTGGGGACTTTTGAAGATAATGACGAGCATCCGCAGATGCTCTAAGGTTCGTCCACACACGGATTaGATGATCTGCAGGATACTG +
Preference number: 3 (lower is better)
Translates to: NSWGLLKIMTSIRRCSKVRPHTD*MICRIL
Trigger: CAGTATCCTGCAGATCATCAAATCCGTGTGTGGACG...AACCTTAGAGCATCTGCGGATGCTCGTCATTATCTTCAAAAGTCCCCAAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR CAA 90 bp TCTTTGGTTCCCAAATATTGCGTCTATCTGCTCTCCGCATTGTTTCAGACAGCCACAGACAGGTTGTGGTaGAACATTCTTGGGCTTCGT +
Preference number: 3 (lower is better)
Translates to: SLVPKYCVYLLSALFQTATDRLW*NILGLR
Trigger: ACGAAGCCCAAGAATGTTCAACCACAACCTGTCTGT...GGCTGTCTGAAACAATGCGGAGAGCAGATAGACGCAATATTTGGGAACCAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR CAA 90 bp TCTTTGGTTCCCAAATATTGCGTCTATCTGCTCTCCGCATTGTTTCAGACAGCCACCTTCACAGACAGGTaGTGGTTGAACATTCTTGGG +
Preference number: 3 (lower is better)
Translates to: SLVPKYCVYLLSALFQTATFTDR*WLNILG
Trigger: CCCAAGAATGTTCAACCACAACCTGTCTGTGAAGGT...GGCTGTCTGAAACAATGCGGAGAGCAGATAGACGCAATATTTGGGAACCAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR TCA 72 bp GTCCAGGCTGTCGTGGTGTTCCTTTACATTGAGACTTaGGATATCTCGTGTTTAATCTTGCACTGGTCCAGC +
Preference number: 3 (lower is better)
Translates to: VQAVVVFLYIET*DISCLILHWSS
Trigger: GCTGGACCAGTGCAAGATTAAACACGAGATATCTCAAGTCTCAATGTAAAGGAACACCACGACAGCCTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR GCA 72 bp AGAAAGCCATTGGTGTTGGATGCATGCCGGAGTGTATaGAGGAGACAGAATTTGGCTAAAGTGGTGCATGAT +
Preference number: 3 (lower is better)
Translates to: RKPLVLDACRSV*RRQNLAKVVHD
Trigger: ATCATGCACCACTTTAGCCAAATTCTGTCTCCTGCATACACTCCGGCATGCATCCAACACCAATGGCTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR CCA 72 bp GGGAAGAATGAACTTCACCCACAGTCCAGGCTGTCGTaGTGTTCCTTTACATTGAGACTTGAGATATCTCGT +
Preference number: 3 (lower is better)
Translates to: GKNELHPQSRLS*CSFTLRLEISR
Trigger: ACGAGATATCTCAAGTCTCAATGTAAAGGAACACCACGACAGCCTGGACTGTGGGTGAAGTTCATTCTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR CAA 90 bp CTTTCCCTCTTGTTCTCTAGTAGCCACAACAATCCTGCACAAGTACTGTTCAGCCAAGTTAAAATAGTCTaGCCAACTAGGGGATCTGCC +
Preference number: 3 (lower is better)
Translates to: LSLLFSSSHNNPAQVLFSQVKIV*PTRGSA
Trigger: GGCAGATCCCCTAGTTGGCAAGACTATTTTAACTTG...GCTGAACAGTACTTGTGCAGGATTGTTGTGGCTACTAGAGAACAAGAGGGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR-3UTR CAA 90 bp CGAGAAGGGGGAAAGCGCTTATGTTATGATGCAACGCCAACAGCAGTCACTCTTGCCCTTGTTTTGATCTaGATCTTTGACCTAATTGCA +
Preference number: 3 (lower is better)
Translates to: REGGKRLCYDATPTAVTLALVLI*IFDLIA
Trigger: TGCAATTAGGTCAAAGATCAAGATCAAAACAAGGGC...AAGAGTGACTGCTGTTGGCGTTGCATCATAACATAAGCGCTTTCCCCCTTCTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR CAA 90 bp AAAATGTCGAAGGCATCGTTTCTTAGGGCAGCAAGTGCTTCCTCATGCCTCCTACCTACACACTTTCTTTaGAAGGGTGTGATTTTAGCC +
Preference number: 3 (lower is better)
Translates to: KMSKASFLRAASASSCLLPTHFL*KGVILA
Trigger: GGCTAAAATCACACCCTTCAAAAGAAAGTGTGTAGG...TAGGAGGCATGAGGAAGCACTTGCTGCCCTAAGAAACGATGCCTTCGACATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR CAA 90 bp ACCCCGAGAATGAAAGGCAGAGTCTGCTGGGGAAGAATGAACTTCACCCACAGTAACAAGACAGGCAGTTaGAGAAATTTATCACATGCT +
Preference number: 3 (lower is better)
Translates to: TPRMKGRVCWGRMNFTHSNKTGS*RNLSHA
Trigger: AGCATGTGATAAATTTCTCAAACTGCCTGTCTTGTT...ACTGTGGGTGAAGTTCATTCTTCCCCAGCAGACTCTGCCTTTCATTCTCGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR CAA 90 bp CACTCTTTGGTTCCCAAATATTGCGTCTATCTGCTCTCCGCATTGTTTCAGACAAAATGCAAAATTGCCTaGGGCACCTTAGGTCTCTGG +
Preference number: 3 (lower is better)
Translates to: HSLVPKYCVYLLSALFQTKCKIA*GTLGLW
Trigger: CCAGAGACCTAAGGTGCCCAAGGCAATTTTGCATTT...TGTCTGAAACAATGCGGAGAGCAGATAGACGCAATATTTGGGAACCAAAGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR CAA 90 bp ACCCCGAGAATGAAAGGCAGAGTCTGCTGGGGAAGAATGAACTTCACCCACAGTAAACTGACTATTAGTTaGAAGGGAGGAGTTACTCAT +
Preference number: 3 (lower is better)
Translates to: TPRMKGRVCWGRMNFTHSKLTIS*KGGVTH
Trigger: ATGAGTAACTCCTCCCTTCAAACTAATAGTCAGTTT...ACTGTGGGTGAAGTTCATTCTTCCCCAGCAGACTCTGCCTTTCATTCTCGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR CAA 90 bp AAAATGTCGAAGGCATCGTTTCTTAGGGCAGCAAGTGCTTCCTCATGCCTCCTAATCTCGTGTTTAATCTaGCACTGGTCCAGCAAATTG +
Preference number: 3 (lower is better)
Translates to: KMSKASFLRAASASSCLLISCLI*HWSSKL
Trigger: CAATTTGCTGGACCAGTGCAAGATTAAACACGAGAT...TAGGAGGCATGAGGAAGCACTTGCTGCCCTAAGAAACGATGCCTTCGACATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR TCA 72 bp ACCCACAGTCCAGGCTGTCGTGGTGTTCCTTTACATTaGGACTTGAGATATCTCGTGTTTAATCTTGCACTG +
Preference number: 3 (lower is better)
Translates to: THSPGCRGVPLH*DLRYLVFNLAL
Trigger: CAGTGCAAGATTAAACACGAGATATCTCAAGTCTCAATGTAAAGGAACACCACGACAGCCTGGACTGTGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR GCA 72 bp GGAGTGTATGCAGGAGACAGAATTTGGCTAAAGTGGTaGATGATGAGGGTAAAATGCAGCAGGGATTATCTG +
Preference number: 3 (lower is better)
Translates to: GVYAGDRIWLKW*MMRVKCSRDYL
Trigger: CAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCTGCATACACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR GCA 72 bp GCAGTCACTCTTTGGTTCCCAAATATTGCGTCTATCTaGTCTCCGCATTGTTTCAGACAGCCACATAGATCT +
Preference number: 3 (lower is better)
Translates to: AVTLWFPNIASI*SPHCFRQPHRS
Trigger: AGATCTATGTGGCTGTCTGAAACAATGCGGAGAGCAGATAGACGCAATATTTGGGAACCAAAGAGTGACTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR CCA 72 bp GAGAGCTGTTACAAAGATTTAGCCTTGGAATCCCTTTaGCTGTTCCCAACAGAAGACAGAAGATGTGCCACT +
Preference number: 3 (lower is better)
Translates to: ESCYKDLALESL*LFPTEDRRCAT
Trigger: AGTGGCACATCTTCTGTCTTCTGTTGGGAACAGCCAAAGGGATTCCAAGGCTAAATCTTTGTAACAGCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR-3UTR CAA 90 bp CACTCTTTGGTTCCCAAATATTGCGTCTATCTGCTCTCCGCATTGTTTCAGACATGGGCAGCCCTTGTTTaGATCTTGATCTTTGACCTA +
Preference number: 3 (lower is better)
Translates to: HSLVPKYCVYLLSALFQTWAALV*ILIFDL
Trigger: TAGGTCAAAGATCAAGATCAAAACAAGGGCTGCCCA...TGTCTGAAACAATGCGGAGAGCAGATAGACGCAATATTTGGGAACCAAAGAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR CAA 90 bp AACTCTTGGGGACTTTTGAAGATAATGACGAGCATCCGCAGATGCTCTAAGGTTCACTGGTCCAGCAAATaGGAAAGGTTATTGCAGAAG +
Preference number: 3 (lower is better)
Translates to: NSWGLLKIMTSIRRCSKVHWSSK*ERLLQK
Trigger: CTTCTGCAATAACCTTTCCAATTTGCTGGACCAGTG...AACCTTAGAGCATCTGCGGATGCTCGTCATTATCTTCAAAAGTCCCCAAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR GCA 72 bp CACGCTCCCAAGACCTGCACCAAAGAGAATTATGGTTaGCTTTTGAGCTACTGTATGACTCTATTTGCCTTT +
Preference number: 3 (lower is better)
Translates to: HAPKTCTKENYG*LLSYCMTLFAF
Trigger: AAAGGCAAATAGAGTCATACAGTAGCTCAAAAGGCAACCATAATTCTCTTTGGTGCAGGTCTTGGGAGCGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR GCA 72 bp AAAATAATAGATTTGAGGCACACAAACTCCTCTCCCTaGAGATTCATCATGCGGAACCGAGATGATGTAGCC +
Preference number: 3 (lower is better)
Translates to: KIIDLRHTNSSP*RFIMRNRDDVA
Trigger: GGCTACATCATCTCGGTTCCGCATGATGAATCTGCAGGGAGAGGAGTTTGTGTGCCTCAAATCTATTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456483.3
3UTR CCA 72 bp AGATCACGCTCCCAAGACCTGCACCAAAGAGAATTATaGTTGCCTTTTGAGCTACTGTATGACTCTATTTGC +
Preference number: 3 (lower is better)
Translates to: RSRSQDLHQREL*LPFELLYDSIC
Trigger: GCAAATAGAGTCATACAGTAGCTCAAAAGGCAACCATAATTCTCTTTGGTGCAGGTCTTGGGAGCGTGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR CCA 72 bp TTATGTTATGATGCAACGCCAACAGCAGTCACTCTTTaGTTCCCAAATATTGCGTCTATCTGCTCTCCGCAT +
Preference number: 3 (lower is better)
Translates to: LCYDATPTAVTL*FPNIASICSPH
Trigger: ATGCGGAGAGCAGATAGACGCAATATTTGGGAACCAAAGAGTGACTGCTGTTGGCGTTGCATCATAACATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR CAA 90 bp TATGGTTGCCTTTTGAGCTACTGTATGACTCTATTTGCCTTTCACATAACTAGCGCCCTACTTTCCCTCTaGTTCTCTAGTAGCCACAAC +
Preference number: 3 (lower is better)
Translates to: YGCLLSYCMTLFAFHITSALLSL*FSSSHN
Trigger: GTTGTGGCTACTAGAGAACAAGAGGGAAAGTAGGGC...GCTAGTTATGTGAAAGGCAAATAGAGTCATACAGTAGCTCAAAAGGCAACCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR-3UTR CAA 90 bp TTCAATACTCTTCTTAATATATTTGCCATTCCCCAGATTCCTGAATCCACTTCCAAGAGATTTCCAAAGTaGCTGGAGACCCCTGGGCGA +
Preference number: 3 (lower is better)
Translates to: FNTLLNIFAIPQIPESTSKRFPK*LETPGR
Trigger: TCGCCCAGGGGTCTCCAGCAACTTTGGAAATCTCTT...GGAAGTGGATTCAGGAATCTGGGGAATGGCAAATATATTAAGAAGAGTATTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR-3UTR CAA 90 bp CACTCTTTGGTTCCCAAATATTGCGTCTATCTGCTCTCCGCATTGTTTCAGACATCAGACTTCTCACAATaGTGTGTCCTACACACTTTC +
Preference number: 3 (lower is better)
Translates to: HSLVPKYCVYLLSALFQTSDFSQ*CVLHTF
Trigger: GAAAGTGTGTAGGACACACAATTGTGAGAAGTCTGA...TGTCTGAAACAATGCGGAGAGCAGATAGACGCAATATTTGGGAACCAAAGAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR TCA 72 bp CAGTCACTCTGTTATAACTCATCTAGCTACAGGTGTTaGGTGTTGGTTGCCAGGGCATATTTTAAAGTCAGG +
Preference number: 3 (lower is better)
Translates to: QSLCYNSSSYRC*VLVARAYFKVR
Trigger: CCTGACTTTAAAATATGCCCTGGCAACCAACACTCAACACCTGTAGCTAGATGAGTTATAACAGAGTGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR TCA 72 bp ACTGGCATCCATGTATGTAATAAGACCAGAGGAGAATaGCCAGTGGGTAGTCAACAAGTTGCCTTTGTTCTT +
Preference number: 3 (lower is better)
Translates to: TGIHVCNKTRGE*PVGSQQVAFVL
Trigger: AAGAACAAAGGCAACTTGTTGACTACCCACTGGTCATTCTCCTCTGGTCTTATTACATACATGGATGCCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR CCA 72 bp TCTGTTATAACTCATCTAGCTACAGGTGTTGAGTGTTaGTTGCCAGGGCATATTTTAAAGTCAGGGGAAGGA +
Preference number: 3 (lower is better)
Translates to: SVITHLATGVEC*LPGHILKSGEG
Trigger: TCCTTCCCCTGACTTTAAAATATGCCCTGGCAACCAACACTCAACACCTGTAGCTAGATGAGTTATAACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR CCA 72 bp GTAAAATGCAAAATTGCCTTGGGCACCTTAGGTCTCTaGCACCTTCTTTACAGAGAACTAAGATGGAATGAG +
Preference number: 3 (lower is better)
Translates to: VKCKIALGTLGL*HLLYRELRWNE
Trigger: CTCATTCCATCTTAGTTCTCTGTAAAGAAGGTGCCAGAGACCTAAGGTGCCCAAGGCAATTTTGCATTTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR CCA 72 bp TTCAGCACAGTGTTCACTTTGCTACTCAGGTGGGACTaGAACATAAATAATCTTCACCTGAATGGCAAACGT +
Preference number: 3 (lower is better)
Translates to: FSTVFTLLLRWD*NINNLHLNGKR
Trigger: ACGTTTGCCATTCAGGTGAAGATTATTTATGTTCCAGTCCCACCTGAGTAGCAAAGTGAACACTGTGCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR CCA 72 bp ACAGCATTCCTTCGAGGATACCAGAGATCAGTTCTTTaGTTGATACAAATGATAGTGACGAGAAGGGGGAAA +
Preference number: 3 (lower is better)
Translates to: TAFLRGYQRSVL*LIQMIVTRRGK
Trigger: TTTCCCCCTTCTCGTCACTATCATTTGTATCAACCAAAGAACTGATCTCTGGTATCCTCGAAGGAATGCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR CAA 90 bp AAAGGCATGGGCTATGGCTTGGTTAAACATATCTGCAAGGTTACTAGGGAAATCATAGGTCAAAGGAAATaGAAGGAAATGAGCTGGCAG +
Preference number: 3 (lower is better)
Translates to: KGMGYGLVKHICKVTREIIGQRK*KEMSWQ
Trigger: CTGCCAGCTCATTTCCTTCAATTTCCTTTGACCTAT...GATTTCCCTAGTAACCTTGCAGATATGTTTAACCAAGCCATAGCCCATGCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR-3UTR CAA 90 bp CACTCTTTGGTTCCCAAATATTGCGTCTATCTGCTCTCCGCATTGTTTCAGACAGGGACCATTAGCTTCTaGATACTAAAATCGCTAGAA +
Preference number: 3 (lower is better)
Translates to: HSLVPKYCVYLLSALFQTGTISF*ILKSLE
Trigger: TTCTAGCGATTTTAGTATCAAGAAGCTAATGGTCCC...TGTCTGAAACAATGCGGAGAGCAGATAGACGCAATATTTGGGAACCAAAGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR CAA 90 bp CCTAACTTGATTCTGGAAACTTGTCTCCTGAACCATATATCCAGGAAACACTGGTGGGTAGTCAACAAGTaGCCTTTGTTCTTTCCCTTA +
Preference number: 3 (lower is better)
Translates to: PNLILETCLLNHISRKHWWVVNK*PLFFPL
Trigger: TAAGGGAAAGAACAAAGGCAACTTGTTGACTACCCA...CCAGTGTTTCCTGGATATATGGTTCAGGAGACAAGTTTCCAGAATCAAGTTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR CAA 90 bp AACTCTTGGGGACTTTTGAAGATAATGACGAGCATCCGCAGATGCTCTAAGGTTCTTGATTCTGGAAACTaGTCTCCTGAACCATATATC +
Preference number: 3 (lower is better)
Translates to: NSWGLLKIMTSIRRCSKVLDSGN*SPEPYI
Trigger: GATATATGGTTCAGGAGACAAGTTTCCAGAATCAAG...AACCTTAGAGCATCTGCGGATGCTCGTCATTATCTTCAAAAGTCCCCAAGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR TCA 72 bp CTGTGTGCCCCTTGTATTCCTATAGGGGGAATGAATTaGCAATCACCAGATACTCTGCTACAGTCATATAAA +
Preference number: 3 (lower is better)
Translates to: LCAPCIPIGGMN*QSPDTLLQSYK
Trigger: TTTATATGACTGTAGCAGAGTATCTGGTGATTGTCAATTCATTCCCCCTATAGGAATACAAGGGGCACACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR CCA 72 bp TATTTGTTCAGCCCTCAAAAGGCATGGGCTATGGCTTaGTTAAACATATCTGCAAGGTTACTAGGGAAATCA +
Preference number: 3 (lower is better)
Translates to: YLFSPQKAWAMA*LNISARLLGKS
Trigger: TGATTTCCCTAGTAACCTTGCAGATATGTTTAACCAAGCCATAGCCCATGCCTTTTGAGGGCTGAACAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR CCA 72 bp TCCATGTATGTAATAAGACCAGAGGAGAATGACCAGTaGGTAGTCAACAAGTTGCCTTTGTTCTTTCCCTTA +
Preference number: 3 (lower is better)
Translates to: SMYVIRPEENDQ*VVNKLPLFFPL
Trigger: TAAGGGAAAGAACAAAGGCAACTTGTTGACTACCCACTGGTCATTCTCCTCTGGTCTTATTACATACATGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR CAA 90 bp ATTCCTTCGAGGATACCAGAGATCAGTTCTTTGGTTGATACAAATGATAGTGACCTCCTTATCCCGCAATaGTCTAGGTATTTTGGGACA +
Preference number: 3 (lower is better)
Translates to: IPSRIPEISSLVDTNDSDLLIPQ*SRYFGT
Trigger: TGTCCCAAAATACCTAGACAATTGCGGGATAAGGAG...GTCACTATCATTTGTATCAACCAAAGAACTGATCTCTGGTATCCTCGAAGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR CAA 90 bp AACTCTTGGGGACTTTTGAAGATAATGACGAGCATCCGCAGATGCTCTAAGGTTGAAGTTTCTTCTCATTaGGCTTTAAATGATGCATGC +
Preference number: 3 (lower is better)
Translates to: NSWGLLKIMTSIRRCSKVEVSSH*ALNDAC
Trigger: GCATGCATCATTTAAAGCCAAATGAGAAGAAACTTC...AACCTTAGAGCATCTGCGGATGCTCGTCATTATCTTCAAAAGTCCCCAAGAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR GCA 72 bp TCAAAAGGCATGGGCTATGGCTTGGTTAAACATATCTaGAAGGTTACTAGGGAAATCAAATCAAAGACTGCA +
Preference number: 3 (lower is better)
Translates to: SKGMGYGLVKHI*KVTREIKSKTA
Trigger: TGCAGTCTTTGATTTGATTTCCCTAGTAACCTTGCAGATATGTTTAACCAAGCCATAGCCCATGCCTTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR CCA 72 bp TTTACCTCATTTAACCCTCACAAGAATCCCATGACATaGCTATATTCCCAATTTATAGACAAGGACACTGGG +
Preference number: 3 (lower is better)
Translates to: FTSFNPHKNPMT*LYSQFIDKDTG
Trigger: CCCAGTGTCCTTGTCTATAAATTGGGAATATAGCCATGTCATGGGATTCTTGTGAGGGTTAAATGAGGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR CAA 90 bp TCCTTCAACAGACTCCAACATAGGAGTCCACATTCTGTAAATGGTGACATTTTTAATTTGATCCAAAGTTaGTGGGTAGCTATCCTATCC +
Preference number: 3 (lower is better)
Translates to: SFNRLQHRSPHSVNGDIFNLIQS*WVAILS
Trigger: GGATAGGATAGCTACCCACAAACTTTGGATCAAATT...AAAAATGTCACCATTTACAGAATGTGGACTCCTATGTTGGAGTCTGTTGAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR-3UTR CAA 90 bp ATTCCTTCGAGGATACCAGAGATCAGTTCTTTGGTTGATACAAATGATAGTGACTGGTGTTCCTTTACATaGAGACTTGAGATATCTCGT +
Preference number: 3 (lower is better)
Translates to: IPSRIPEISSLVDTNDSDWCSFT*RLEISR
Trigger: ACGAGATATCTCAAGTCTCAATGTAAAGGAACACCA...GTCACTATCATTTGTATCAACCAAAGAACTGATCTCTGGTATCCTCGAAGGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR TCA 72 bp TTTCACATAACTAGCTTCCCCAAGCAGATCTGCCTGTaGATATTAGACATTACTATGGTGTTAGTGATCACT +
Preference number: 3 (lower is better)
Translates to: FHITSFPKQICL*ILDITMVLVIT
Trigger: AGTGATCACTAACACCATAGTAATGTCTAATATTCACAGGCAGATCTGCTTGGGGAAGCTAGTTATGTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR-3UTR CAA 90 bp CTGCTACAGTCATATAAAAGCTTTAAGGTGTACCACTTTCATAAAAGGATGCATTACAAAGATTTAGCCTaGGAATCCCTTTGGCTGTTC +
Preference number: 3 (lower is better)
Translates to: LLQSYKSFKVYHFHKRMHYKDLA*ESLWLF
Trigger: GAACAGCCAAAGGGATTCCAAGGCTAAATCTTTGTA...ATGCATCCTTTTATGAAAGTGGTACACCTTAAAGCTTTTATATGACTGTAGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR CCA 72 bp GAAGGATGTTTTGAAGAAAATTTGATCCAAAGTTTGTaGGTAGCTATCCTATCCTTCTTAAGACACTTTAAG +
Preference number: 3 (lower is better)
Translates to: EGCFEENLIQSL*VAILSFLRHFK
Trigger: CTTAAAGTGTCTTAAGAAGGATAGGATAGCTACCCACAAACTTTGGATCAAATTTTCTTCAAAACATCCTTC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR GCA 90 bp CCTCCACGGCTAGTGGGCGCATGTAGGCGGTGGGCGTCCAGCATCTCCAGCAGCCGCTGGTGCTGCTGCTaGAGGGTCAGGCCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: PPRLVGACRRWASSISSSRWCCC*RVRPAL
Trigger: CAAGGCAGGCCTGACCCTGCAGCAGCAGCACCAGCG...GCTGCTGGAGATGCTGGACGCCCACCGCCTACATGCGCCCACTAGCCGTGGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR CCA 90 bp CCTCCACGGCTAGTGGGCGCATGTAGGCGGTGGGCGTCCAGCATCTCCAGCAGCGGCGCATGTAGGCGGTaGGCGTCCAGCATCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PPRLVGACRRWASSISSSGACRR*ASSISS
Trigger: GCTGGAGATGCTGGACGCCCACCGCCTACATGCGCC...GCTGCTGGAGATGCTGGACGCCCACCGCCTACATGCGCCCACTAGCCGTGGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR TCA 90 bp GTCAGGCCTGCCTTGGCCATCAGGTGGATCAAAGTGTCTGTGATCTTGTCCAGGCGGCGGCCGCGGCGTTaGACTCGTAGGCGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: VRPALAIRWIKVSVILSRRRPRR*TRRRRP
Trigger: AGGGCGCCGCCTACGAGTTCAACGCCGCGGCCGCCG...CCTGGACAAGATCACAGACACTTTGATCCACCTGATGGCCAAGGCAGGCCTGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR TCA 90 bp GGGCAGCCAGCTGCACGGACAGTCACTGAATATTGTGTGTTCTCTCTGTCCCCAGGCGCAGACCCTGGCTaGCCCGCACGCCACTCCGGG +
Preference number: 4 (lower is better)
Translates to: GQPAARTVTEYCVFSLSPGADPG*PARHSG
Trigger: CCCGGAGTGGCGTGCGGGTCAGCCAGGGTCTGCGCC...TGGGGACAGAGAGAACACACAATATTCAGTGACTGTCCGTGCAGCTGGCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR TCA 90 bp CCTCCACGGCTAGTGGGCGCATGTAGGCGGTGGGCGTCCAGCATCTCCAGCAGCTTGCAAGGAATGCGATaGAGTAGAGCCCGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: PPRLVGACRRWASSISSSLQGMR*SRARSG
Trigger: GCCACTGCGGGCTCTACTTCATCGCATTCCTTGCAA...GCTGCTGGAGATGCTGGACGCCCACCGCCTACATGCGCCCACTAGCCGTGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR GCA 90 bp AGTACTGTTCAGCTCCATGCCCCAGGGCTAAATGCAACACCAGGGCCCCTGCTCAGCCGCTGGTGCTGCTaGTGCAGGGTCAGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: STVQLHAPGLNATPGPLLSRWCC*CRVRPA
Trigger: GGCAGGCCTGACCCTGCAGCAGCAGCACCAGCGGCT...GAGCAGGGGCCCTGGTGTTGCATTTAGCCCTGGGGCATGGAGCTGAACAGTACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp GTCGAAGATCTCCACCATGCCCTCTACACATTTTCCCTGGTTCCACCTTTCATCAGCCTGCGGGTCCGGTaGAGCCGGGCGACCCGACGG +
Preference number: 4 (lower is better)
Translates to: VEDLHHALYTFSLVPPFISLRVR*SRATRR
Trigger: CCGTCGGGTCGCCCGGCTTCACCGGACCCGCAGGCT...GATGAAAGGTGGAACCAGGGAAAATGTGTAGAGGGCATGGTGGAGATCTTCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR TCA 90 bp CCCTGTGTAAGGCACACACACGCCGGGAAGATCCAAGTACAGTGCCCACTGGAAGTGGCAGGGCCACCCTaGGCAAGTCTGGCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: PCVRHTHAGKIQVQCPLEVAGPP*ASLAVP
Trigger: AGGCACAGCCAGACTTGCTCAGGGTGGCCCTGCCAC...TTCCAGTGGGCACTGTACTTGGATCTTCCCGGCGTGTGTGTGCCTTACACAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp CCCTGTGTAAGGCACACACACGCCGGGAAGATCCAAGTACAGTGCCCACTGGAAATTTGGCCTGTAGAATaGCGGCGGGCCGGCCTCGCG +
Preference number: 4 (lower is better)
Translates to: PCVRHTHAGKIQVQCPLEIWPVE*RRAGLA
Trigger: CGCGAGGCCGGCCCGCCGGCATTCTACAGGCCAAAT...TTCCAGTGGGCACTGTACTTGGATCTTCCCGGCGTGTGTGTGCCTTACACAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGCTTGGGCCAGCCGCTGGTaGTGCTGCTGCAGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: DEGKMQQGLSEPCGSQGAWASRW*CCCRVR
Trigger: CCTGACCCTGCAGCAGCAGCACCAGCGGCTGGCCCA...AGCTCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp GATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGCTGGAGGGTCATGGTCATaGTCCGTGGCCGCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: DEGKMQQGLSEPCGSQGAGGSWS*SVAAGR
Trigger: CCTGCCCGCGGCCACGGACCATGACCATGACCCTCC...AGCTCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp ATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGCTCGGCACCTGCTGGCCGTaGGGCTGCAGGAAAGGCGAC +
Preference number: 4 (lower is better)
Translates to: MRVKCSRDYLNRVGARELGTCWP*GCRKGD
Trigger: GTCGCCTTTCCTGCAGCCCCACGGCCAGCAGGTGCC...GAGCTCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TGCAAGGAATGCGATGAAGTAGAGCCCGCAGTGGCCAAGTGGCTTTGGTCCGTCCGGAGCCGGCAGGCCTaGCAGCTCTTCCTCCTGTTT +
Preference number: 4 (lower is better)
Translates to: CKECDEVEPAVAKWLWSVRSRQA*QLFLLF
Trigger: AAACAGGAGGAAGAGCTGCCAGGCCTGCCGGCTCCG...GACGGACCAAAGCCACTTGGCCACTGCGGGCTCTACTTCATCGCATTCCTTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR CCA 90 bp AGTACTGTTCAGCTCCATGCCCCAGGGCTAAATGCAACACCAGGGCCCCTGCTCTCCCTGGGTGCTCCATaGAGCGCCAGACGAGACCAA +
Preference number: 4 (lower is better)
Translates to: STVQLHAPGLNATPGPLLSLGAP*SARRDQ
Trigger: TTGGTCTCGTCTGGCGCTCCATGGAGCACCCAGGGA...GAGCAGGGGCCCTGGTGTTGCATTTAGCCCTGGGGCATGGAGCTGAACAGTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp TGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTAGCCTGCGGGTCCGGTaGAGCCGGGCGACCCGACGG +
Preference number: 4 (lower is better)
Translates to: WLKWCMMRVKCSRDYLNRSLRVR*SRATRR
Trigger: CCGTCGGGTCGCCCGGCTTCACCGGACCCGCAGGCT...ACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000206249.8
CDS-3UTR TCA 90 bp CTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGCGGCGGCCGCGGCGTTaGACTCGTAGGCGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: LKWCMMRVKCSRDYLNRVRRPRR*TRRRRP
Trigger: AGGGCGCCGCCTACGAGTTCAACGCCGCGGCCGCCG...CACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp CTTTCCCTCTTGTTCTCTAGTAGCCACAACAATCCTGCACAAGTACTGTTCAGCCGGCGGCCGCGGCGTTaGACTCGTAGGCGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: LSLLFSSSHNNPAQVLFSRRPRR*TRRRRP
Trigger: AGGGCGCCGCCTACGAGTTCAACGCCGCGGCCGCCG...GCTGAACAGTACTTGTGCAGGATTGTTGTGGCTACTAGAGAACAAGAGGGAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp AGTACTGTTCAGCTCCATGCCCCAGGGCTAAATGCAACACCAGGGCCCCTGCTCCATCCAACAAGGCACTaGCCATCTGGTCGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: STVQLHAPGLNATPGPLLHPTRH*PSGRPS
Trigger: TGACGGCCGACCAGATGGTCAGTGCCTTGTTGGATG...GAGCAGGGGCCCTGGTGTTGCATTTAGCCCTGGGGCATGGAGCTGAACAGTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GTGATCTTGTCCAGGACTCGGTGGATATGGTCCTTCTCTTCCAGAGACTTCAGGAGCTGCGGCGGCGGGTaGAGTAGCATCAGCGGGCTC +
Preference number: 4 (lower is better)
Translates to: VILSRTRWIWSFSSRDFRSCGGG*SSISGL
Trigger: GAGCCCGCTGATGCTACTGCACCCGCCGCCGCAGCT...CCTGAAGTCTCTGGAAGAGAAGGACCATATCCACCGAGTCCTGGACAAGATCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR GCA 90 bp TGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGCCGCTGGTGCTGCTaGTGCAGGGTCAGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: WCMMRVKCSRDYLNRVGASRWCC*CRVRPA
Trigger: GGCAGGCCTGACCCTGCAGCAGCAGCACCAGCGGCT...GGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GTGATCTTGTCCAGGACTCGGTGGATATGGTCCTTCTCTTCCAGAGACTTCAGGAGCCGCTGGTGCTGCTaGTGCAGGGTCAGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: VILSRTRWIWSFSSRDFRSRWCC*CRVRPA
Trigger: GGCAGGCCTGACCCTGCAGCAGCAGCACCAGCGGCT...CCTGAAGTCTCTGGAAGAGAAGGACCATATCCACCGAGTCCTGGACAAGATCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR GCA 90 bp TGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGCCAGCCGCTGGTGCTaGTGCTGCAGGGTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: CMMRVKCSRDYLNRVGARASRWC*CCRVRP
Trigger: AGGCCTGACCCTGCAGCAGCAGCACCAGCGGCTGGC...CCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TACTTTTGCAAGGAATGCGATGAAGTAGAGCCCGCAGTGGCCAAGTGGCTTTGGGCCAGCCGCTGGTGCTaGTGCTGCAGGGTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: YFCKECDEVEPAVAKWLWASRWC*CCRVRP
Trigger: AGGCCTGACCCTGCAGCAGCAGCACCAGCGGCTGGC...CCAAAGCCACTTGGCCACTGCGGGCTCTACTTCATCGCATTCCTTGCAAAAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR GCA 90 bp GCAGCATGTCGAAGATCTCCACCATGCCCTCTACACATTTTCCCTGGTTCCACCCGTCTCCTCCACGGATaGCCCTCCACGGCTAGTGGG +
Preference number: 4 (lower is better)
Translates to: AACRRSPPCPLHIFPGSTRLLHG*PSTASG
Trigger: CCCACTAGCCGTGGAGGGGCATCCGTGGAGGAGACG...GGTGGAACCAGGGAAAATGTGTAGAGGGCATGGTGGAGATCTTCGACATGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR CCA 90 bp ATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGCTCCATGGTCATGGTCCGTaGCCGCGGGCAGGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: MRVKCSRDYLNRVGARELHGHGP*PRAGCR
Trigger: TCTGCACCCTGCCCGCGGCCACGGACCATGACCATG...GAGCTCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TACTTTTGCAAGGAATGCGATGAAGTAGAGCCCGCAGTGGCCAAGTGGCTTTGGGGCACCTGCTGGCCGTaGGGCTGCAGGAAAGGCGAC +
Preference number: 4 (lower is better)
Translates to: YFCKECDEVEPAVAKWLWGTCWP*GCRKGD
Trigger: GTCGCCTTTCCTGCAGCCCCACGGCCAGCAGGTGCC...CCAAAGCCACTTGGCCACTGCGGGCTCTACTTCATCGCATTCCTTGCAAAAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR CCA 90 bp ATTGTGCTAGAGAAGCAAAGGCCCAGGGAAGGCTGCCCTGTGGCTGGAATGAGCGGAGCTCTCAGACCGTaGCAGGGAAACCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: IVLEKQRPREGCPVAGMSGALRP*QGNPLP
Trigger: AGGCAGAGGGTTTCCCTGCCACGGTCTGAGAGCTCC...GCTCATTCCAGCCACAGGGCAGCCTTCCCTGGGCCTTTGCTTCTCTAGCACAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp ATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGCTCAGTAGGCAGGGCACTTaGCAGCCCCTCCCGGCAGAC +
Preference number: 4 (lower is better)
Translates to: MRVKCSRDYLNRVGARELSRQGT*QPLPAD
Trigger: GTCTGCCGGGAGGGGCTGCCAAGTGCCCTGCCTACT...GAGCTCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS-3UTR CCA 90 bp CGAGAAGGGGGAAAGCGCTTATGTTATGATGCAACGCCAACAGCAGTCACTCTTGCGAGGCGCAGACCCTaGCTGACCCGCACGCCACTC +
Preference number: 4 (lower is better)
Translates to: REGGKRLCYDATPTAVTLARRRP*LTRTPL
Trigger: GAGTGGCGTGCGGGTCAGCCAGGGTCTGCGCCTCGC...AAGAGTGACTGCTGTTGGCGTTGCATCATAACATAAGCGCTTTCCCCCTTCTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR TCA 90 bp TTTCCAAACAAGACATACCAAGAGAAGCCCGAGCAGCTCACCTGGGTCATTGGCGCTCCAGGGGGATCTTaGGCTGCGGACGGTTCAGGG +
Preference number: 4 (lower is better)
Translates to: FPNKTYQEKPEQLTWVIGAPGGS*AADGSG
Trigger: CCCTGAACCGTCCGCAGCTCAAGATCCCCCTGGAGC...GCCAATGACCCAGGTGAGCTGCTCGGGCTTCTCTTGGTATGTCTTGTTTGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GTGATCTTGTCCAGGACTCGGTGGATATGGTCCTTCTCTTCCAGAGACTTCAGGCCCGACGGGAGCAAGTaGAGTCCCAGGACGAACGCC +
Preference number: 4 (lower is better)
Translates to: VILSRTRWIWSFSSRDFRPDGSK*SPRTNA
Trigger: GGCGTTCGTCCTGGGACTGCACTTGCTCCCGTCGGG...CCTGAAGTCTCTGGAAGAGAAGGACCATATCCACCGAGTCCTGGACAAGATCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR GCA 90 bp AGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATGGCCGCGGGCAGGGTaGAGACCGTGTCCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: RRQNLAKVVHDEGKMQQGWPRAG*RPCPRR
Trigger: CCTGCGGGGACACGGTCTGCACCCTGCCCGCGGCCA...TCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGGCCGCGGGCAGGGTaGAGACCGTGTCCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: LAKVVHDEGKMQQGLSEPWPRAG*RPCPRR
Trigger: CCTGCGGGGACACGGTCTGCACCCTGCCCGCGGCCA...CGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGCTACACGGCGGGCTTGCTaGTGTCCAGGTACACCTCGC +
Preference number: 4 (lower is better)
Translates to: DEGKMQQGLSEPCGSQGATRRAC*CPGTPR
Trigger: GCGAGGTGTACCTGGACAGCAGCAAGCCCGCCGTGT...AGCTCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCAGGAAAGGCGACAGCTaGGGCGGCGGGTGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: VVHDEGKMQQGLSEPCGSRKGDS*GGGCSS
Trigger: GCTACTGCACCCGCCGCCGCAGCTGTCGCCTTTCCT...GCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GTGATCTTGTCCAGGACTCGGTGGATATGGTCCTTCTCTTCCAGAGACTTCAGGAGGAAAGGCGACAGCTaGGGCGGCGGGTGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: VILSRTRWIWSFSSRDFRRKGDS*GGGCSS
Trigger: GCTACTGCACCCGCCGCCGCAGCTGTCGCCTTTCCT...CCTGAAGTCTCTGGAAGAGAAGGACCATATCCACCGAGTCCTGGACAAGATCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR GCA 90 bp GTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCATTTGGCCTGTAGAATaGCGGCGGGCCGGCCTCGCG +
Preference number: 4 (lower is better)
Translates to: VVHDEGKMQQGLSEPCGSIWPVE*RRAGLA
Trigger: CGCGAGGCCGGCCCGCCGGCATTCTACAGGCCAAAT...GCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGATTTGGCCTGTAGAATaGCGGCGGGCCGGCCTCGCG +
Preference number: 4 (lower is better)
Translates to: CMMRVKCSRDYLNRVGARIWPVE*RRAGLA
Trigger: CGCGAGGCCGGCCCGCCGGCATTCTACAGGCCAAAT...CCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGCGCTGGTGCTGCTGCTaGAGGGTCAGGCCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: VHDEGKMQQGLSEPCGSQRWCCC*RVRPAL
Trigger: CAAGGCAGGCCTGACCCTGCAGCAGCAGCACCAGCG...CTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp CATGTCGAAGATCTCCACCATGCCCTCTACACATTTTCCCTGGTTCCACCTTTCTGGGCCAGCCGCTGGTaGTGCTGCTGCAGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: HVEDLHHALYTFSLVPPFWASRW*CCCRVR
Trigger: CCTGACCCTGCAGCAGCAGCACCAGCGGCTGGCCCA...GAAAGGTGGAACCAGGGAAAATGTGTAGAGGGCATGGTGGAGATCTTCGACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR GCA 90 bp TGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGCGTCTCCTCCACGGATaGCCCTCCACGGCTAGTGGG +
Preference number: 4 (lower is better)
Translates to: CMMRVKCSRDYLNRVGARRLLHG*PSTASG
Trigger: CCCACTAGCCGTGGAGGGGCATCCGTGGAGGAGACG...CCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGCTAGGCCCAGGGAAGGCTaGCCTGTGGCTGGAATGAGC +
Preference number: 4 (lower is better)
Translates to: DEGKMQQGLSEPCGSQGARPREG*PVAGMS
Trigger: GCTCATTCCAGCCACAGGGCAGCCTTCCCTGGGCCT...AGCTCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGCTGAGGTGCTCCTAGAGTaGCCACGCTCAGGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: DEGKMQQGLSEPCGSQGAEVLLE*PRSGSQ
Trigger: CTGGGACCCTGAGCGTGGGCACTCTAGGAGCACCTC...AGCTCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS-3UTR CCA 90 bp GTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCATGGTCATGGTCCGTaGCCGCGGGCAGGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: VVHDEGKMQQGLSEPCGSHGHGP*PRAGCR
Trigger: TCTGCACCCTGCCCGCGGCCACGGACCATGACCATG...GCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp CATGTCGAAGATCTCCACCATGCCCTCTACACATTTTCCCTGGTTCCACCTTTCGGAGGGTCATGGTCATaGTCCGTGGCCGCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: HVEDLHHALYTFSLVPPFGGSWS*SVAAGR
Trigger: CCTGCCCGCGGCCACGGACCATGACCATGACCCTCC...GAAAGGTGGAACCAGGGAAAATGTGTAGAGGGCATGGTGGAGATCTTCGACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR CCA 90 bp AGTACTGTTCAGCTCCATGCCCCAGGGCTAAATGCAACACCAGGGCCCCTGCTCCCCTGTCTGCCAGGTTaGTCAGTAAGCCCATCATCG +
Preference number: 4 (lower is better)
Translates to: STVQLHAPGLNATPGPLLPCLPG*SVSPSS
Trigger: CGATGATGGGCTTACTGACCAACCTGGCAGACAGGG...GAGCAGGGGCCCTGGTGTTGCATTTAGCCCTGGGGCATGGAGCTGAACAGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp CACACAAACTCCTCTCCCTGCAGATTCATCATGCGGAACCGAGATGATGTAGCCAGGATGAGGAGGAGCTaGGCCAGCCGCTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: HTNSSPCRFIMRNRDDVARMRRS*ASRWCC
Trigger: GCAGCACCAGCGGCTGGCCCAGCTCCTCCTCATCCT...GGCTACATCATCTCGGTTCCGCATGATGAATCTGCAGGGAGAGGAGTTTGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR CCA 90 bp TGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGGCGCATGTAGGCGGTaGGCGTCCAGCATCTCCAGC +
Preference number: 4 (lower is better)
Translates to: CMMRVKCSRDYLNRVGARGACRR*ASSISS
Trigger: GCTGGAGATGCTGGACGCCCACCGCCTACATGCGCC...CCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp ATTGTGCTAGAGAAGCAAAGGCCCAGGGAAGGCTGCCCTGTGGCTGGAATGAGCGTGGCCAAGTGGCTTTaGTCCGTCTCCTCCACGGAT +
Preference number: 4 (lower is better)
Translates to: IVLEKQRPREGCPVAGMSVAKWL*SVSSTD
Trigger: ATCCGTGGAGGAGACGGACCAAAGCCACTTGGCCAC...GCTCATTCCAGCCACAGGGCAGCCTTCCCTGGGCCTTTGCTTCTCTAGCACAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp AGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGCGGCGGCCGCGGCGTTaGACTCGTAGGCGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: RIWLKWCMMRVKCSRDYLRRPRR*TRRRRP
Trigger: AGGGCGCCGCCTACGAGTTCAACGCCGCGGCCGCCG...CAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp ACCCCGAGAATGAAAGGCAGAGTCTGCTGGGGAAGAATGAACTTCACCCACAGTAACCCAGGTCTCCCCTaGCTCCAGACCCTACCCCGT +
Preference number: 4 (lower is better)
Translates to: TPRMKGRVCWGRMNFTHSNPGLP*LQTLPR
Trigger: ACGGGGTAGGGTCTGGAGTCAGGGGAGACCTGGGTT...ACTGTGGGTGAAGTTCATTCTTCCCCAGCAGACTCTGCCTTTCATTCTCGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR TCA 90 bp ATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGCTGCTGGATAGAGGCTaGGTTTCACGGCCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: MMRVKCSRDYLNRVGARELLDRG*VSRPGG
Trigger: GCCCCCTGGCCGTGAAACTCAGCCTCTATCCAGCAG...CTCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443427.5
CDS-3UTR GCA 90 bp GCAGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGAGCTGCGGCGGCGGGTaGAGTAGCATCAGCGGGCTC +
Preference number: 4 (lower is better)
Translates to: AGDRIWLKWCMMRVKCSRSCGGG*SSISGL
Trigger: GAGCCCGCTGATGCTACTGCACCCGCCGCCGCAGCT...CCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GTCGAAGATCTCCACCATGCCCTCTACACATTTTCCCTGGTTCCACCTTTCATCTGCTGGCCGTGGGGCTaGAGGAAAGGCGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: VEDLHHALYTFSLVPPFICWPWG*RKGDSC
Trigger: GCAGCTGTCGCCTTTCCTGCAGCCCCACGGCCAGCA...GATGAAAGGTGGAACCAGGGAAAATGTGTAGAGGGCATGGTGGAGATCTTCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR GCA 90 bp AAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGGCCAGCCGCTGGTGCTaGTGCTGCAGGGTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: KVVHDEGKMQQGLSEPCGASRWC*CCRVRP
Trigger: AGGCCTGACCCTGCAGCAGCAGCACCAGCGGCTGGC...CCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp AAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGCCGCTGGTGCTaGTGCTGCAGGGTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: KWCMMRVKCSRDYLNRVGASRWC*CCRVRP
Trigger: AGGCCTGACCCTGCAGCAGCAGCACCAGCGGCTGGC...TCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp GGCAGGGAAACCCTCTGCCTCCCCCGTGATGTAATACTTTTGCAAGGAATGCGAAACCGGCGGGCCACCTaGAAAAAGAGCACAGCCCGA +
Preference number: 4 (lower is better)
Translates to: GRETLCLPRDVILLQGMRNRRAT*KKSTAR
Trigger: TCGGGCTGTGCTCTTTTTCCAGGTGGCCCGCCGGTT...TCGCATTCCTTGCAAAAGTATTACATCACGGGGGAGGCAGAGGGTTTCCCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR CCA 90 bp GCAGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGGAGGGTCATGGTCATaGTCCGTGGCCGCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: AGDRIWLKWCMMRVKCSRGGSWS*SVAAGR
Trigger: CCTGCCCGCGGCCACGGACCATGACCATGACCCTCC...CCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGTGGTGTGGAGGGTCATaGTCATGGTCCGTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: CMMRVKCSRDYLNRVGARWCGGS*SWSVAA
Trigger: CGCGGCCACGGACCATGACCATGACCCTCCACACCA...CCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp CGGAACCGAGATGATGTAGCCAGCAGCATGTCGAAGATCTCCACCATGCCCTCTGGGTCAGGCCTGCCTTaGCCATCAGGTGGATCAAAG +
Preference number: 4 (lower is better)
Translates to: RNRDDVASSMSKISTMPSGSGLP*PSGGSK
Trigger: CTTTGATCCACCTGATGGCCAAGGCAGGCCTGACCC...AGAGGGCATGGTGGAGATCTTCGACATGCTGCTGGCTACATCATCTCGGTTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR CCA 90 bp TACTTTTGCAAGGAATGCGATGAAGTAGAGCCCGCAGTGGCCAAGTGGCTTTGGCCCGCAGTGGCCAAGTaGCTTTGGTCCGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: YFCKECDEVEPAVAKWLWPAVAK*LWSVSS
Trigger: GGAGGAGACGGACCAAAGCCACTTGGCCACTGCGGG...CCAAAGCCACTTGGCCACTGCGGGCTCTACTTCATCGCATTCCTTGCAAAAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR TCA 90 bp TGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGCAGCAGGGATTATCTaGACCGTGTGGGAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: CMMRVKCSRDYLNRVGARAAGII*TVWEPG
Trigger: CCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGC...CCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp GTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCGCAGCAGGGATTATCTaGACCGTGTGGGAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: VVHDEGKMQQGLSEPCGSAAGII*TVWEPG
Trigger: CCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGC...GCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp ATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGGCAGCAGGGATTATCTaGACCGTGTGGGAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: MMRVKCSRDYLNRVGAREAAGII*TVWEPG
Trigger: CCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGC...CTCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GTCGAAGATCTCCACCATGCCCTCTACACATTTTCCCTGGTTCCACCTTTCATCAGGGGGATCTTGAGCTaGGGACGGTTCAGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: VEDLHHALYTFSLVPPFIRGILS*GRFRGS
Trigger: GGAGCCCCTGAACCGTCCGCAGCTCAAGATCCCCCT...GATGAAAGGTGGAACCAGGGAAAATGTGTAGAGGGCATGGTGGAGATCTTCGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR GCA 90 bp TGTGATCTTGTCCAGGACTCGGTGGATATGGTCCTTCTCTTCCAGAGACTTCAGACACGGCGGGCTTGCTaGTGTCCAGGTACACCTCGC +
Preference number: 4 (lower is better)
Translates to: CDLVQDSVDMVLLFQRLQTRRAC*CPGTPR
Trigger: GCGAGGTGTACCTGGACAGCAGCAAGCCCGCCGTGT...CTGAAGTCTCTGGAAGAGAAGGACCATATCCACCGAGTCCTGGACAAGATCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR GCA 90 bp GCAGCATGTCGAAGATCTCCACCATGCCCTCTACACATTTTCCCTGGTTCCACCTGTACACGGCGGGCTTaGTGCTGTCCAGGTACACCT +
Preference number: 4 (lower is better)
Translates to: AACRRSPPCPLHIFPGSTCTRRA*CCPGTP
Trigger: AGGTGTACCTGGACAGCAGCAAGCCCGCCGTGTACA...GGTGGAACCAGGGAAAATGTGTAGAGGGCATGGTGGAGATCTTCGACATGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR GCA 90 bp CTTTCCCTCTTGTTCTCTAGTAGCCACAACAATCCTGCACAAGTACTGTTCAGCAGCTGCGGCGGCGGGTaGAGTAGCATCAGCGGGCTC +
Preference number: 4 (lower is better)
Translates to: LSLLFSSSHNNPAQVLFSSCGGG*SSISGL
Trigger: GAGCCCGCTGATGCTACTGCACCCGCCGCCGCAGCT...GCTGAACAGTACTTGTGCAGGATTGTTGTGGCTACTAGAGAACAAGAGGGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTAGCTGCGGCGGCGGGTaGAGTAGCATCAGCGGGCTC +
Preference number: 4 (lower is better)
Translates to: AKVVHDEGKMQQGLSEPCSCGGG*SSISGL
Trigger: GAGCCCGCTGATGCTACTGCACCCGCCGCCGCAGCT...ACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TGCAGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGAGCTGCGGCGGCGGGTaGAGTAGCATCAGCGGGCTC +
Preference number: 4 (lower is better)
Translates to: CRRQNLAKVVHDEGKMQQSCGGG*SSISGL
Trigger: GAGCCCGCTGATGCTACTGCACCCGCCGCCGCAGCT...CTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp AAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGTGCTGGCCGTGGGGCTaGAGGAAAGGCGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: KVVHDEGKMQQGLSEPCGCWPWG*RKGDSC
Trigger: GCAGCTGTCGCCTTTCCTGCAGCCCCACGGCCAGCA...CCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TTTCCAAACAAGACATACCAAGAGAAGCCCGAGCAGCTCACCTGGGTCATTGGCCTGCAGGGTCAGGCCTaGCTTGGCCATCAGGTGGAT +
Preference number: 4 (lower is better)
Translates to: FPNKTYQEKPEQLTWVIGLQGQA*LGHQVD
Trigger: ATCCACCTGATGGCCAAGGCAGGCCTGACCCTGCAG...GCCAATGACCCAGGTGAGCTGCTCGGGCTTCTCTTGGTATGTCTTGTTTGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp CCATTGGTGTTGGATGCATGCCGGAGTGTATGCAGGAGACAGAATTTGGCTAAACGCTGGTGCTGCTGCTaGAGGGTCAGGCCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: PLVLDACRSVCRRQNLAKRWCCC*RVRPAL
Trigger: CAAGGCAGGCCTGACCCTGCAGCAGCAGCACCAGCG...TTTAGCCAAATTCTGTCTCCTGCATACACTCCGGCATGCATCCAACACCAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTAGCCGCTGGTGCTGCTaGTGCAGGGTCAGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: WLKWCMMRVKCSRDYLNRSRWCC*CRVRPA
Trigger: GGCAGGCCTGACCCTGCAGCAGCAGCACCAGCGGCT...ACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTAGCCGCTGGTGCTGCTaGTGCAGGGTCAGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: AKVVHDEGKMQQGLSEPCSRWCC*CRVRPA
Trigger: GGCAGGCCTGACCCTGCAGCAGCAGCACCAGCGGCT...ACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGGCCAGCCGCTGGTGCTaGTGCTGCAGGGTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: LAKVVHDEGKMQQGLSEPASRWC*CCRVRP
Trigger: AGGCCTGACCCTGCAGCAGCAGCACCAGCGGCTGGC...CGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp CTTTCCCTCTTGTTCTCTAGTAGCCACAACAATCCTGCACAAGTACTGTTCAGCTGGGCCAGCCGCTGGTaGTGCTGCTGCAGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: LSLLFSSSHNNPAQVLFSWASRW*CCCRVR
Trigger: CCTGACCCTGCAGCAGCAGCACCAGCGGCTGGCCCA...GCTGAACAGTACTTGTGCAGGATTGTTGTGGCTACTAGAGAACAAGAGGGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GCAAGGGGGAAAGAGAGCTGTTACAAAGATTTAGCCTTGGAATCCCTTTGGCTGCGTCTCCTCCACGGATaGCCCTCCACGGCTAGTGGG +
Preference number: 4 (lower is better)
Translates to: ARGKESCYKDLALESLWLRLLHG*PSTASG
Trigger: CCCACTAGCCGTGGAGGGGCATCCGTGGAGGAGACG...CAGCCAAAGGGATTCCAAGGCTAAATCTTTGTAACAGCTCTCTTTCCCCCTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGTGCCCCAGGGCTAAATaGAACACCAGGGCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: CMMRVKCSRDYLNRVGARCPRAK*NTRAPA
Trigger: AGCAGGGGCCCTGGTGTTGCATTTAGCCCTGGGGCA...CCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TGCACAGCTCTAAACACACACACTGACGATGGGTTTGGAACATGGCAGCATTTACCCACCCTTCTCCCGTaGCCCAGGGTGCTGGGCCAA +
Preference number: 4 (lower is better)
Translates to: CTALNTHTDDGFGTWQHLPTLLP*PRVLGQ
Trigger: TTGGCCCAGCACCCTGGGGCACGGGAGAAGGGTGGG...TAAATGCTGCCATGTTCCAAACCCATCGTCAGTGTGTGTGTTTAGAGCTGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GTTTCTGCCCTACTTTCCCTCTTGTTCTCTAGTAGCCACAACAATCCTGCACAACCCACCCTTCTCCCGTaGCCCAGGGTGCTGGGCCAA +
Preference number: 4 (lower is better)
Translates to: VSALLSLLFSSSHNNPAQPTLLP*PRVLGQ
Trigger: TTGGCCCAGCACCCTGGGGCACGGGAGAAGGGTGGG...TTGTGCAGGATTGTTGTGGCTACTAGAGAACAAGAGGGAAAGTAGGGCAGAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp CATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAAAACCCCAGCCCCTTTaGCCCTACCCTTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: HDEGKMQQGLSEPCGSQGKPQPL*PYPWRL
Trigger: CAGCCTCCAAGGGTAGGGGCAAAGGGGCTGGGGTTT...TCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS-3UTR GCA 90 bp TGTGATCTTGTCCAGGACTCGGTGGATATGGTCCTTCTCTTCCAGAGACTTCAGTTATGTCCTGTAGAATaGCGGCGGGCCGGCCTCGCG +
Preference number: 4 (lower is better)
Translates to: CDLVQDSVDMVLLFQRLQLCPVE*RRAGLA
Trigger: CGCGAGGCCGGCCCGCCGGCATTCTACAGGACATAA...CTGAAGTCTCTGGAAGAGAAGGACCATATCCACCGAGTCCTGGACAAGATCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR CCA 90 bp AGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGAGGAGGGTCATGGTCATaGTCCGTGGCCGCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RRQNLAKVVHDEGKMQQGGGSWS*SVAAGR
Trigger: CCTGCCCGCGGCCACGGACCATGACCATGACCCTCC...TCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp GTCTGTGATCTTGTCCAGGACTCGGTGGATATGGTCCTTCTCTTCCAGAGACTTTGGTGTGGAGGGTCATaGTCATGGTCCGTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: VCDLVQDSVDMVLLFQRLWCGGS*SWSVAA
Trigger: CGCGGCCACGGACCATGACCATGACCCTCCACACCA...AAGTCTCTGGAAGAGAAGGACCATATCCACCGAGTCCTGGACAAGATCACAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR CCA 90 bp TGCAGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGCACCTGCTGGCCGTaGGGCTGCAGGAAAGGCGAC +
Preference number: 4 (lower is better)
Translates to: CRRQNLAKVVHDEGKMQQGTCWP*GCRKGD
Trigger: GTCGCCTTTCCTGCAGCCCCACGGCCAGCAGGTGCC...CTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp AGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGAGGCACCTGCTGGCCGTaGGGCTGCAGGAAAGGCGAC +
Preference number: 4 (lower is better)
Translates to: RRQNLAKVVHDEGKMQQGGTCWP*GCRKGD
Trigger: GTCGCCTTTCCTGCAGCCCCACGGCCAGCAGGTGCC...TCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp AGTACTGTTCAGCTCCATGCCCCAGGGCTAAATGCAACACCAGGGCCCCTGCTCAGGACTCGGTGGATATaGTCCTTCTCTTCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: STVQLHAPGLNATPGPLLRTRWI*SFSSRD
Trigger: GTCTCTGGAAGAGAAGGACCATATCCACCGAGTCCT...GAGCAGGGGCCCTGGTGTTGCATTTAGCCCTGGGGCATGGAGCTGAACAGTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp AGTACTGTTCAGCTCCATGCCCCAGGGCTAAATGCAACACCAGGGCCCCTGCTCGCCTTGGCCATCAGGTaGATCAAAGTGTCTGTGATC +
Preference number: 4 (lower is better)
Translates to: STVQLHAPGLNATPGPLLALAIR*IKVSVI
Trigger: GATCACAGACACTTTGATCCACCTGATGGCCAAGGC...GAGCAGGGGCCCTGGTGTTGCATTTAGCCCTGGGGCATGGAGCTGAACAGTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp AAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGGATGAGGAGGAGCTaGGCCAGCCGCTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: KVVHDEGKMQQGLSEPCGRMRRS*ASRWCC
Trigger: GCAGCACCAGCGGCTGGCCCAGCTCCTCCTCATCCT...CCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp GGCAGGGAAACCCTCTGCCTCCCCCGTGATGTAATACTTTTGCAAGGAATGCGAGTGGCCAAGTGGCTTTaGTCCGTCTCCTCCACGGAT +
Preference number: 4 (lower is better)
Translates to: GRETLCLPRDVILLQGMRVAKWL*SVSSTD
Trigger: ATCCGTGGAGGAGACGGACCAAAGCCACTTGGCCAC...TCGCATTCCTTGCAAAAGTATTACATCACGGGGGAGGCAGAGGGTTTCCCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR CCA 90 bp AGTACTGTTCAGCTCCATGCCCCAGGGCTAAATGCAACACCAGGGCCCCTGCTCGAGCTAGTTGATTTGTaGTCTCCAGGGCAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: STVQLHAPGLNATPGPLLELVDL*SPGQKW
Trigger: CCACTTCTGCCCTGGAGACCACAAATCAACTAGCTC...GAGCAGGGGCCCTGGTGTTGCATTTAGCCCTGGGGCATGGAGCTGAACAGTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp GATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGCTGCCGGTCTCTGGCCCTaGGACACTATGCAGTTACTG +
Preference number: 4 (lower is better)
Translates to: DEGKMQQGLSEPCGSQGAAGLWP*DTMQLL
Trigger: CAGTAACTGCATAGTGTCCCAGGGCCAGAGACCGGC...AGCTCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS-3UTR CCA 90 bp GGGGGAAAGCGCTTATGTTATGATGCAACGCCAACAGCAGTCACTCTTTGGTTCGGCATTCTCCCCGGGTaGGACAGGCTTGTCACTGGG +
Preference number: 4 (lower is better)
Translates to: GGKRLCYDATPTAVTLWFGILPG*DRLVTG
Trigger: CCCAGTGACAAGCCTGTCCCACCCGGGGAGAATGCC...GAACCAAAGAGTGACTGCTGTTGGCGTTGCATCATAACATAAGCGCTTTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR TCA 90 bp ATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGGCCCAGTTGATCATGTaGACCAGCTCCCTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: MMRVKCSRDYLNRVGAREAQLIM*TSSLSA
Trigger: GGCAGACAGGGAGCTGGTTCACATGATCAACTGGGC...CTCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp TGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCCCCTCTTCGCCCAGTTaGTCATGTGAACCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: WCMMRVKCSRDYLNRVGAPSSPS*SCEPAP
Trigger: GGGAGCTGGTTCACATGATCAACTGGGCGAAGAGGG...GGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp GTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGCCCTCTTCGCCCAGTTaGTCATGTGAACCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: VHDEGKMQQGLSEPCGSQPSSPS*SCEPAP
Trigger: GGGAGCTGGTTCACATGATCAACTGGGCGAAGAGGG...CTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp CGGAACCGAGATGATGTAGCCAGCAGCATGTCGAAGATCTCCACCATGCCCTCTCCTCTGCCTCCCCCGTaGTGTAATACTTTTGCAAGG +
Preference number: 4 (lower is better)
Translates to: RNRDDVASSMSKISTMPSPLPPP*CNTFAR
Trigger: CCTTGCAAAAGTATTACATCACGGGGGAGGCAGAGG...AGAGGGCATGGTGGAGATCTTCGACATGCTGCTGGCTACATCATCTCGGTTCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR TCA 90 bp CCCTACTTTCCCTCTTGTTCTCTAGTAGCCACAACAATCCTGCACAAGTACTGTGTGGCAGGGCCACCCTaGGCAAGTCTGGCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: PYFPSCSLVATTILHKYCVAGPP*ASLAVP
Trigger: AGGCACAGCCAGACTTGCTCAGGGTGGCCCTGCCAC...ACAGTACTTGTGCAGGATTGTTGTGGCTACTAGAGAACAAGAGGGAAAGTAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp CTTTCCCTCTTGTTCTCTAGTAGCCACAACAATCCTGCACAAGTACTGTTCAGCGTGGCAGGGCCACCCTaGGCAAGTCTGGCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: LSLLFSSSHNNPAQVLFSVAGPP*ASLAVP
Trigger: AGGCACAGCCAGACTTGCTCAGGGTGGCCCTGCCAC...GCTGAACAGTACTTGTGCAGGATTGTTGTGGCTACTAGAGAACAAGAGGGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp GTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCGGGTCCCAGGACACATaGCACCCAATGGAGGCTTTG +
Preference number: 4 (lower is better)
Translates to: VVHDEGKMQQGLSEPCGSGSQDT*HPMEAL
Trigger: CAAAGCCTCCATTGGGTGTCATGTGTCCTGGGACCC...GCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS-3UTR GCA 90 bp AATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAATGGCCGCGGGCAGGGTaGAGACCGTGTCCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: NLAKVVHDEGKMQQGLSEWPRAG*RPCPRR
Trigger: CCTGCGGGGACACGGTCTGCACCCTGCCCGCGGCCA...TTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCTGTACACGGCGGGCTTaGTGCTGTCCAGGTACACCT +
Preference number: 4 (lower is better)
Translates to: WCMMRVKCSRDYLNRVGACTRRA*CCPGTP
Trigger: AGGTGTACCTGGACAGCAGCAAGCCCGCCGTGTACA...GGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGTGTACACGGCGGGCTTaGTGCTGTCCAGGTACACCT +
Preference number: 4 (lower is better)
Translates to: CMMRVKCSRDYLNRVGARCTRRA*CCPGTP
Trigger: AGGTGTACCTGGACAGCAGCAAGCCCGCCGTGTACA...CCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp AGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGAAGGAAAGGCGACAGCTaGGGCGGCGGGTGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: RRQNLAKVVHDEGKMQQGRKGDS*GGGCSS
Trigger: GCTACTGCACCCGCCGCCGCAGCTGTCGCCTTTCCT...TCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TGCAGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGTGCTGGCCGTGGGGCTaGAGGAAAGGCGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: CRRQNLAKVVHDEGKMQQCWPWG*RKGDSC
Trigger: GCAGCTGTCGCCTTTCCTGCAGCCCCACGGCCAGCA...CTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTTGCTGGCCGTGGGGCTaGAGGAAAGGCGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: WLKWCMMRVKCSRDYLNRCWPWG*RKGDSC
Trigger: GCAGCTGTCGCCTTTCCTGCAGCCCCACGGCCAGCA...ACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGATTTGGCCTGTAGAATaGCGGCGGGCCGGCCTCGCG +
Preference number: 4 (lower is better)
Translates to: LAKVVHDEGKMQQGLSEPIWPVE*RRAGLA
Trigger: CGCGAGGCCGGCCCGCCGGCATTCTACAGGCCAAAT...CGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp AGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGACGTCTCCTCCACGGATaGCCCTCCACGGCTAGTGGG +
Preference number: 4 (lower is better)
Translates to: RRQNLAKVVHDEGKMQQGRLLHG*PSTASG
Trigger: CCCACTAGCCGTGGAGGGGCATCCGTGGAGGAGACG...TCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GGCAGGGAAACCCTCTGCCTCCCCCGTGATGTAATACTTTTGCAAGGAATGCGAGGCAGGGAAACCCTCTaGCTCCCCCGTGATGTAATA +
Preference number: 4 (lower is better)
Translates to: GRETLCLPRDVILLQGMRGRETL*LPRDVI
Trigger: TATTACATCACGGGGGAGGCAGAGGGTTTCCCTGCC...TCGCATTCCTTGCAAAAGTATTACATCACGGGGGAGGCAGAGGGTTTCCCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR GCA 90 bp CCCTGTGTAAGGCACACACACGCCGGGAAGATCCAAGTACAGTGCCCACTGGAATACTGTTCAGCTCCATaGCCCAGGGCTAAATGCAAC +
Preference number: 4 (lower is better)
Translates to: PCVRHTHAGKIQVQCPLEYCSAP*PRAKCN
Trigger: GTTGCATTTAGCCCTGGGGCATGGAGCTGAACAGTA...TTCCAGTGGGCACTGTACTTGGATCTTCCCGGCGTGTGTGTGCCTTACACAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCACCGGCGGGCCACCCTaGTGGATCAAGAACGTCTTT +
Preference number: 4 (lower is better)
Translates to: WCMMRVKCSRDYLNRVGATGGPP*WIKNVF
Trigger: AAAGACGTTCTTGATCCAGCAGGGTGGCCCGCCGGT...GGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS-3UTR CCA 90 bp AAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGATGGTGTGGAGGGTCATaGTCATGGTCCGTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: KWCMMRVKCSRDYLNRVGWCGGS*SWSVAA
Trigger: CGCGGCCACGGACCATGACCATGACCCTCCACACCA...TCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp CGGAACCGAGATGATGTAGCCAGCAGCATGTCGAAGATCTCCACCATGCCCTCTCCAGATGCTTTGGTGTaGAGGGTCATGGTCATGGTC +
Preference number: 4 (lower is better)
Translates to: RNRDDVASSMSKISTMPSPDALV*RVMVMV
Trigger: GACCATGACCATGACCCTCCACACCAAAGCATCTGG...AGAGGGCATGGTGGAGATCTTCGACATGCTGCTGGCTACATCATCTCGGTTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR CCA 90 bp GTCTGTGATCTTGTCCAGGACTCGGTGGATATGGTCCTTCTCTTCCAGAGACTTGCACCGTGTAGCCGCTaGGCTCGTTCTCCAGGTAGT +
Preference number: 4 (lower is better)
Translates to: VCDLVQDSVDMVLLFQRLAPCSR*ARSPGS
Trigger: ACTACCTGGAGAACGAGCCCAGCGGCTACACGGTGC...AAGTCTCTGGAAGAGAAGGACCATATCCACCGAGTCCTGGACAAGATCACAGAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR CCA 90 bp GCAGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGCGGAGCCGGCAGGCCTaGCAGCTCTTCCTCCTGTTT +
Preference number: 4 (lower is better)
Translates to: AGDRIWLKWCMMRVKCSRRSRQA*QLFLLF
Trigger: AAACAGGAGGAAGAGCTGCCAGGCCTGCCGGCTCCG...CCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp GCAAGGGGGAAAGAGAGCTGTTACAAAGATTTAGCCTTGGAATCCCTTTGGCTGCGGAGCCGGCAGGCCTaGCAGCTCTTCCTCCTGTTT +
Preference number: 4 (lower is better)
Translates to: ARGKESCYKDLALESLWLRSRQA*QLFLLF
Trigger: AAACAGGAGGAAGAGCTGCCAGGCCTGCCGGCTCCG...CAGCCAAAGGGATTCCAAGGCTAAATCTTTGTAACAGCTCTCTTTCCCCCTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAAGGCACTGACCATCTaGTCGGCCGTCAGGGACAAG +
Preference number: 4 (lower is better)
Translates to: WCMMRVKCSRDYLNRVGAKALTI*SAVRDK
Trigger: CTTGTCCCTGACGGCCGACCAGATGGTCAGTGCCTT...GGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp GTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGAAGGCACTGACCATCTaGTCGGCCGTCAGGGACAAG +
Preference number: 4 (lower is better)
Translates to: VHDEGKMQQGLSEPCGSQKALTI*SAVRDK
Trigger: CTTGTCCCTGACGGCCGACCAGATGGTCAGTGCCTT...CTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp CGAGAAGGGGGAAAGCGCTTATGTTATGATGCAACGCCAACAGCAGTCACTCTTTCCCTGGGTGCTCCATaGAGCGCCAGACGAGACCAA +
Preference number: 4 (lower is better)
Translates to: REGGKRLCYDATPTAVTLSLGAP*SARRDQ
Trigger: TTGGTCTCGTCTGGCGCTCCATGGAGCACCCAGGGA...AAGAGTGACTGCTGTTGGCGTTGCATCATAACATAAGCGCTTTCCCCCTTCTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CCA 90 bp AGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGAAGGATGAGGAGGAGCTaGGCCAGCCGCTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: RRQNLAKVVHDEGKMQQGRMRRS*ASRWCC
Trigger: GCAGCACCAGCGGCTGGCCCAGCTCCTCCTCATCCT...TCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTAGGATGAGGAGGAGCTaGGCCAGCCGCTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: WLKWCMMRVKCSRDYLNRRMRRS*ASRWCC
Trigger: GCAGCACCAGCGGCTGGCCCAGCTCCTCCTCATCCT...ACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp AAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGACCCGCAGTGGCCAAGTaGCTTTGGTCCGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: KWCMMRVKCSRDYLNRVGPAVAK*LWSVSS
Trigger: GGAGGAGACGGACCAAAGCCACTTGGCCACTGCGGG...TCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp GTCGAAGATCTCCACCATGCCCTCTACACATTTTCCCTGGTTCCACCTTTCATCGGAGCTCTCAGACCGTaGCAGGGAAACCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: VEDLHHALYTFSLVPPFIGALRP*QGNPLP
Trigger: AGGCAGAGGGTTTCCCTGCCACGGTCTGAGAGCTCC...GATGAAAGGTGGAACCAGGGAAAATGTGTAGAGGGCATGGTGGAGATCTTCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR CCA 90 bp TGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGACAGCGCTGGATGAATaGCAGTGGGGAGTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: CMMRVKCSRDYLNRVGARTALDE*QWGVRG
Trigger: TCCCCTCACTCCCCACTGCCATTCATCCAGCGCTGT...CCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS-3UTR CCA 90 bp GGGGGAAAGCGCTTATGTTATGATGCAACGCCAACAGCAGTCACTCTTTGGTTCGTCGGTACCTCTGTTTaGGGCACACCCAACCCCGAG +
Preference number: 4 (lower is better)
Translates to: GGKRLCYDATPTAVTLWFVGTSV*GTPNPE
Trigger: CTCGGGGTTGGGTGTGCCCCAAACAGAGGTACCGAC...GAACCAAAGAGTGACTGCTGTTGGCGTTGCATCATAACATAAGCGCTTTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR TCA 90 bp GGGGGAAAGCGCTTATGTTATGATGCAACGCCAACAGCAGTCACTCTTTGGTTCCATCCAACAAGGCACTaGCCATCTGGTCGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: GGKRLCYDATPTAVTLWFHPTRH*PSGRPS
Trigger: TGACGGCCGACCAGATGGTCAGTGCCTTGTTGGATG...GAACCAAAGAGTGACTGCTGTTGGCGTTGCATCATAACATAAGCGCTTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR TCA 90 bp GGGGGAAAGCGCTTATGTTATGATGCAACGCCAACAGCAGTCACTCTTTGGTTCCCCTCTTCGCCCAGTTaGTCATGTGAACCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: GGKRLCYDATPTAVTLWFPSSPS*SCEPAP
Trigger: GGGAGCTGGTTCACATGATCAACTGGGCGAAGAGGG...GAACCAAAGAGTGACTGCTGTTGGCGTTGCATCATAACATAAGCGCTTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR TCA 90 bp GTGATCTTGTCCAGGACTCGGTGGATATGGTCCTTCTCTTCCAGAGACTTCAGGCATGCGGAACCGAGATaGTGTAGCCAGCAGCATGTC +
Preference number: 4 (lower is better)
Translates to: VILSRTRWIWSFSSRDFRHAEPR*CSQQHV
Trigger: GACATGCTGCTGGCTACATCATCTCGGTTCCGCATG...CCTGAAGTCTCTGGAAGAGAAGGACCATATCCACCGAGTCCTGGACAAGATCAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR TCA 90 bp CCCTGTGTAAGGCACACACACGCCGGGAAGATCCAAGTACAGTGCCCACTGGAAGTAAATGGAGCTAGTTaGTTTGTGGTCTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: PCVRHTHAGKIQVQCPLEVNGAS*FVVSRA
Trigger: TGCCCTGGAGACCACAAATCAACTAGCTCCATTTAC...TTCCAGTGGGCACTGTACTTGGATCTTCCCGGCGTGTGTGTGCCTTACACAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp AGTACTGTTCAGCTCCATGCCCCAGGGCTAAATGCAACACCAGGGCCCCTGCTCTCTAAACACACACACTaGCGATGGGTTTGGAACATG +
Preference number: 4 (lower is better)
Translates to: STVQLHAPGLNATPGPLLSKHTH*RWVWNM
Trigger: CATGTTCCAAACCCATCGTCAGTGTGTGTGTTTAGA...GAGCAGGGGCCCTGGTGTTGCATTTAGCCCTGGGGCATGGAGCTGAACAGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TGCAGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGAGGGGGATCTTGAGCTaGGGACGGTTCAGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: CRRQNLAKVVHDEGKMQQRGILS*GRFRGS
Trigger: GGAGCCCCTGAACCGTCCGCAGCTCAAGATCCCCCT...CTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp ACAGCTCTAAACACACACACTGACGATGGGTTTGGAACATGGCAGCATTTACATTGCTGGCCGTGGGGCTaGAGGAAAGGCGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: TALNTHTDDGFGTWQHLHCWPWG*RKGDSC
Trigger: GCAGCTGTCGCCTTTCCTGCAGCCCCACGGCCAGCA...ATGTAAATGCTGCCATGTTCCAAACCCATCGTCAGTGTGTGTGTTTAGAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp AAAATGTCGAAGGCATCGTTTCTTAGGGCAGCAAGTGCTTCCTCATGCCTCCTAAGTAGCTTCCCTGGGTaGTCCATGGAGCGCCAGACG +
Preference number: 4 (lower is better)
Translates to: KMSKASFLRAASASSCLLSSFPG*SMERQT
Trigger: CGTCTGGCGCTCCATGGAGCACCCAGGGAAGCTACT...TAGGAGGCATGAGGAAGCACTTGCTGCCCTAAGAAACGATGCCTTCGACATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR GCA 90 bp ATTGTGCTAGAGAAGCAAAGGCCCAGGGAAGGCTGCCCTGTGGCTGGAATGAGCCGAAGATCTCCACCATaGCCTCTACACATTTTCCCT +
Preference number: 4 (lower is better)
Translates to: IVLEKQRPREGCPVAGMSRRSPP*PLHIFP
Trigger: AGGGAAAATGTGTAGAGGGCATGGTGGAGATCTTCG...GCTCATTCCAGCCACAGGGCAGCCTTCCCTGGGCCTTTGCTTCTCTAGCACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp ATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACTGGGCCAGCCGCTGGTaGTGCTGCTGCAGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: IWLKWCMMRVKCSRDYLNWASRW*CCCRVR
Trigger: CCTGACCCTGCAGCAGCAGCACCAGCGGCTGGCCCA...GTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp CCCTGTGTAAGGCACACACACGCCGGGAAGATCCAAGTACAGTGCCCACTGGAACCTTTGTTACTCATGTaGCTGATGTGGGAGAGGATG +
Preference number: 4 (lower is better)
Translates to: PCVRHTHAGKIQVQCPLEPLLLM*LMWERM
Trigger: CATCCTCTCCCACATCAGGCACATGAGTAACAAAGG...TTCCAGTGGGCACTGTACTTGGATCTTCCCGGCGTGTGTGTGCCTTACACAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGCAGGGAAACCCTCTaGCTCCCCCGTGATGTAATA +
Preference number: 4 (lower is better)
Translates to: VHDEGKMQQGLSEPCGSQGRETL*LPRDVI
Trigger: TATTACATCACGGGGGAGGCAGAGGGTTTCCCTGCC...CTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TTTCCAAACAAGACATACCAAGAGAAGCCCGAGCAGCTCACCTGGGTCATTGGCGGCAGGGAAACCCTCTaGCTCCCCCGTGATGTAATA +
Preference number: 4 (lower is better)
Translates to: FPNKTYQEKPEQLTWVIGGRETL*LPRDVI
Trigger: TATTACATCACGGGGGAGGCAGAGGGTTTCCCTGCC...GCCAATGACCCAGGTGAGCTGCTCGGGCTTCTCTTGGTATGTCTTGTTTGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp CCATTGGTGTTGGATGCATGCCGGAGTGTATGCAGGAGACAGAATTTGGCTAAATCCCGTGCCCCAGGGTaGTGGGCCAATTGTAGGAAC +
Preference number: 4 (lower is better)
Translates to: PLVLDACRSVCRRQNLAKSRAPG*WANCRN
Trigger: GTTCCTACAATTGGCCCAGCACCCTGGGGCACGGGA...TTTAGCCAAATTCTGTCTCCTGCATACACTCCGGCATGCATCCAACACCAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp ATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCCCACCCTTCTCCCGTaGCCCAGGGTGCTGGGCCAA +
Preference number: 4 (lower is better)
Translates to: IWLKWCMMRVKCSRDYLNPTLLP*PRVLGQ
Trigger: TTGGCCCAGCACCCTGGGGCACGGGAGAAGGGTGGG...GTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp AGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGAAGGCCCAGGGAAGGCTaGCCTGTGGCTGGAATGAGC +
Preference number: 4 (lower is better)
Translates to: RRQNLAKVVHDEGKMQQGRPREG*PVAGMS
Trigger: GCTCATTCCAGCCACAGGGCAGCCTTCCCTGGGCCT...TCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp CTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGAGGCCCAGGGAAGGCTaGCCTGTGGCTGGAATGAGC +
Preference number: 4 (lower is better)
Translates to: LKWCMMRVKCSRDYLNRVRPREG*PVAGMS
Trigger: GCTCATTCCAGCCACAGGGCAGCCTTCCCTGGGCCT...CACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp CCCTGTGTAAGGCACACACACGCCGGGAAGATCCAAGTACAGTGCCCACTGGAATGTGTCTCAGGCACCTaGTCATGGGACAATATGTTG +
Preference number: 4 (lower is better)
Translates to: PCVRHTHAGKIQVQCPLECVSGT*SWDNML
Trigger: CAACATATTGTCCCATGAGCAGGTGCCTGAGACACA...TTCCAGTGGGCACTGTACTTGGATCTTCCCGGCGTGTGTGTGCCTTACACAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TCTACTGAACCCTGGTGCACACCCAGAATTAACCATTTTCCTCCAAATACTTTCGGAGGGTCATGGTCATaGTCCGTGGCCGCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: STEPWCTPRINHFPPNTFGGSWS*SVAAGR
Trigger: CCTGCCCGCGGCCACGGACCATGACCATGACCCTCC...GAAAGTATTTGGAGGAAAATGGTTAATTCTGGGTGTGCACCAGGGTTCAGTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGGTGTGGAGGGTCATaGTCATGGTCCGTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: LAKVVHDEGKMQQGLSEPWCGGS*SWSVAA
Trigger: CGCGGCCACGGACCATGACCATGACCCTCCACACCA...CGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp AAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGGCACCGTGTAGCCGCTaGGCTCGTTCTCCAGGTAGT +
Preference number: 4 (lower is better)
Translates to: KVVHDEGKMQQGLSEPCGAPCSR*ARSPGS
Trigger: ACTACCTGGAGAACGAGCCCAGCGGCTACACGGTGC...CCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp CCATTGGTGTTGGATGCATGCCGGAGTGTATGCAGGAGACAGAATTTGGCTAAAGCACCGTGTAGCCGCTaGGCTCGTTCTCCAGGTAGT +
Preference number: 4 (lower is better)
Translates to: PLVLDACRSVCRRQNLAKAPCSR*ARSPGS
Trigger: ACTACCTGGAGAACGAGCCCAGCGGCTACACGGTGC...TTTAGCCAAATTCTGTCTCCTGCATACACTCCGGCATGCATCCAACACCAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp GCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTCGGAGCCGGCAGGCCTaGCAGCTCTTCCTCCTGTTT +
Preference number: 4 (lower is better)
Translates to: AKVVHDEGKMQQGLSEPCRSRQA*QLFLLF
Trigger: AAACAGGAGGAAGAGCTGCCAGGCCTGCCGGCTCCG...ACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp CTTTCCCTCTTGTTCTCTAGTAGCCACAACAATCCTGCACAAGTACTGTTCAGCCCCGCAGTGGCCAAGTaGCTTTGGTCCGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LSLLFSSSHNNPAQVLFSPAVAK*LWSVSS
Trigger: GGAGGAGACGGACCAAAGCCACTTGGCCACTGCGGG...GCTGAACAGTACTTGTGCAGGATTGTTGTGGCTACTAGAGAACAAGAGGGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp AGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGACCCGCAGTGGCCAAGTaGCTTTGGTCCGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RRQNLAKVVHDEGKMQQGPAVAK*LWSVSS
Trigger: GGAGGAGACGGACCAAAGCCACTTGGCCACTGCGGG...TCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp ATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGCTCTCTCCAGGGCAGAAGTaGACTCTACTGAACCCTGGT +
Preference number: 4 (lower is better)
Translates to: MRVKCSRDYLNRVGARELSPGQK*TLLNPG
Trigger: ACCAGGGTTCAGTAGAGTCCACTTCTGCCCTGGAGA...GAGCTCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGCAGAGAAAGCTGTACTaGGGAGGAGAAACCCCAGCC +
Preference number: 4 (lower is better)
Translates to: CMMRVKCSRDYLNRVGARQRKLY*GGETPA
Trigger: GGCTGGGGTTTCTCCTCCCCAGTACAGCTTTCTCTG...CCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338799.9
3UTR CAA 72 bp GCCTTGGCCATCAGGTGGATCAAAGTGTCTGTGATCTaGTCCAGGACTCGGTGGATATGGTCCTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: ALAIRWIKVSVI*SRTRWIWSFSS
Trigger: GGAAGAGAAGGACCATATCCACCGAGTCCTGGACAAGATCACAGACACTTTGATCCACCTGATGGCCAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR TCA 90 bp TCTACTGAACCCTGGTGCACACCCAGAATTAACCATTTTCCTCCAAATACTTTCGCTCCAGGGGGATCTTaGGCTGCGGACGGTTCAGGG +
Preference number: 4 (lower is better)
Translates to: STEPWCTPRINHFPPNTFAPGGS*AADGSG
Trigger: CCCTGAACCGTCCGCAGCTCAAGATCCCCCTGGAGC...GAAAGTATTTGGAGGAAAATGGTTAATTCTGGGTGTGCACCAGGGTTCAGTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp GACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATGCTCCAGGGGGATCTTaGGCTGCGGACGGTTCAGGG +
Preference number: 4 (lower is better)
Translates to: DRIWLKWCMMRVKCSRDYAPGGS*AADGSG
Trigger: CCCTGAACCGTCCGCAGCTCAAGATCCCCCTGGAGC...ATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp CATATAAAAGCTTTAAGGTGTACCACTTTCATAAAAGGATGCATTGCCATAGGACGGCGGCCGCGGCGTTaGACTCGTAGGCGGCGCCCT +
Preference number: 4 (lower is better)
Translates to: HIKALRCTTFIKGCIAIGRRPRR*TRRRRP
Trigger: AGGGCGCCGCCTACGAGTTCAACGCCGCGGCCGCCG...TCCTATGGCAATGCATCCTTTTATGAAAGTGGTACACCTTAAAGCTTTTATATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp CCATTGGTGTTGGATGCATGCCGGAGTGTATGCAGGAGACAGAATTTGGCTAAACATCCAACAAGGCACTaGCCATCTGGTCGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: PLVLDACRSVCRRQNLAKHPTRH*PSGRPS
Trigger: TGACGGCCGACCAGATGGTCAGTGCCTTGTTGGATG...TTTAGCCAAATTCTGTCTCCTGCATACACTCCGGCATGCATCCAACACCAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp AAAATGTCGAAGGCATCGTTTCTTAGGGCAGCAAGTGCTTCCTCATGCCTCCTAGCCCAGTTGATCATGTaGACCAGCTCCCTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: KMSKASFLRAASASSCLLAQLIM*TSSLSA
Trigger: GGCAGACAGGGAGCTGGTTCACATGATCAACTGGGC...TAGGAGGCATGAGGAAGCACTTGCTGCCCTAAGAAACGATGCCTTCGACATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR TCA 90 bp GCAAGGGGGAAAGAGAGCTGTTACAAAGATTTAGCCTTGGAATCCCTTTGGCTGCCCTCTTCGCCCAGTTaGTCATGTGAACCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: ARGKESCYKDLALESLWLPSSPS*SCEPAP
Trigger: GGGAGCTGGTTCACATGATCAACTGGGCGAAGAGGG...CAGCCAAAGGGATTCCAAGGCTAAATCTTTGTAACAGCTCTCTTTCCCCCTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp GATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGCTGGATCAAAGTGTCTGTaGTCTTGTCCAGGACTCGGT +
Preference number: 4 (lower is better)
Translates to: DEGKMQQGLSEPCGSQGAGSKCL*SCPGLG
Trigger: ACCGAGTCCTGGACAAGATCACAGACACTTTGATCC...AGCTCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp ATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGCCTCTGCCTCCCCCGTaGTGTAATACTTTTGCAAGG +
Preference number: 4 (lower is better)
Translates to: MMRVKCSRDYLNRVGAREPLPPP*CNTFAR
Trigger: CCTTGCAAAAGTATTACATCACGGGGGAGGCAGAGG...CTCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp GCAGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGGCCACGCTGGGAAATaGAGAAGAGCTGGACTACCC +
Preference number: 4 (lower is better)
Translates to: AGDRIWLKWCMMRVKCSRGHAGK*RRAGLP
Trigger: GGGTAGTCCAGCTCTTCTTCATTTCCCAGCGTGGCC...CCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp GCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTAGGCCCCAGTCAGCCTaGGTAGTGACAGCAACGGTC +
Preference number: 4 (lower is better)
Translates to: AKVVHDEGKMQQGLSEPCRPQSA*VVTATV
Trigger: GACCGTTGCTGTCACTACTCAGGCTGACTGGGGCCT...ACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp AAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAAGGGCATACGTAATCTaGCCAGGCCCCAGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: KWCMMRVKCSRDYLNRVGRAYVI*PGPSQP
Trigger: AGGCTGACTGGGGCCTGGTCAGATTACGTATGCCCT...TCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp CCATTGGTGTTGGATGCATGCCGGAGTGTATGCAGGAGACAGAATTTGGCTAAAAGGGCATACGTAATCTaGCCAGGCCCCAGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: PLVLDACRSVCRRQNLAKRAYVI*PGPSQP
Trigger: AGGCTGACTGGGGCCTGGTCAGATTACGTATGCCCT...TTTAGCCAAATTCTGTCTCCTGCATACACTCCGGCATGCATCCAACACCAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp AAAATGTCGAAGGCATCGTTTCTTAGGGCAGCAAGTGCTTCCTCATGCCTCCTACCCCATCTCAGCCCATaGCTTCTTCCTAGCTTGGCG +
Preference number: 4 (lower is better)
Translates to: KMSKASFLRAASASSCLLPHLSP*LLPSLA
Trigger: CGCCAAGCTAGGAAGAAGTCATGGGCTGAGATGGGG...TAGGAGGCATGAGGAAGCACTTGCTGCCCTAAGAAACGATGCCTTCGACATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR GCA 90 bp GCAAGGGGGAAAGAGAGCTGTTACAAAGATTTAGCCTTGGAATCCCTTTGGCTGTGTACACGGCGGGCTTaGTGCTGTCCAGGTACACCT +
Preference number: 4 (lower is better)
Translates to: ARGKESCYKDLALESLWLCTRRA*CCPGTP
Trigger: AGGTGTACCTGGACAGCAGCAAGCCCGCCGTGTACA...CAGCCAAAGGGATTCCAAGGCTAAATCTTTGTAACAGCTCTCTTTCCCCCTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATAGGAAAGGCGACAGCTaGGGCGGCGGGTGCAGTAGC +
Preference number: 4 (lower is better)
Translates to: DRIWLKWCMMRVKCSRDYRKGDS*GGGCSS
Trigger: GCTACTGCACCCGCCGCCGCAGCTGTCGCCTTTCCT...ATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp ATTGTGCTAGAGAAGCAAAGGCCCAGGGAAGGCTGCCCTGTGGCTGGAATGAGCATAGTCATTGCACACTaGACAGTAGCGAGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: IVLEKQRPREGCPVAGMSIVIAH*TVASLL
Trigger: AAGGAGACTCGCTACTGTGCAGTGTGCAATGACTAT...GCTCATTCCAGCCACAGGGCAGCCTTCCCTGGGCCTTTGCTTCTCTAGCACAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp CGGAACCGAGATGATGTAGCCAGCAGCATGTCGAAGATCTCCACCATGCCCTCTCGAAGATCTCCACCATaGCCTCTACACATTTTCCCT +
Preference number: 4 (lower is better)
Translates to: RNRDDVASSMSKISTMPSRRSPP*PLHIFP
Trigger: AGGGAAAATGTGTAGAGGGCATGGTGGAGATCTTCG...AGAGGGCATGGTGGAGATCTTCGACATGCTGCTGGCTACATCATCTCGGTTCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR GCA 90 bp CTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGCTGCAGGGTCAGGCCTaGCTTGGCCATCAGGTGGAT +
Preference number: 4 (lower is better)
Translates to: LKWCMMRVKCSRDYLNRVLQGQA*LGHQVD
Trigger: ATCCACCTGATGGCCAAGGCAGGCCTGACCCTGCAG...CACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp CTTCCTCCTGTTTTTATCAATGGTGCACTGGTTGGTGGCTGGACACATATAGTCCTGCAGGGTCAGGCCTaGCTTGGCCATCAGGTGGAT +
Preference number: 4 (lower is better)
Translates to: LPPVFINGALVGGWTHIVLQGQA*LGHQVD
Trigger: ATCCACCTGATGGCCAAGGCAGGCCTGACCCTGCAG...GACTATATGTGTCCAGCCACCAACCAGTGCACCATTGATAAAAACAGGAGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR GCA 90 bp TCTACTGAACCCTGGTGCACACCCAGAATTAACCATTTTCCTCCAAATACTTTCCGCTGGTGCTGCTGCTaGAGGGTCAGGCCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: STEPWCTPRINHFPPNTFRWCCC*RVRPAL
Trigger: CAAGGCAGGCCTGACCCTGCAGCAGCAGCACCAGCG...GAAAGTATTTGGAGGAAAATGGTTAATTCTGGGTGTGCACCAGGGTTCAGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp AGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGCGTCTCCTCCACGGATaGCCCTCCACGGCTAGTGGG +
Preference number: 4 (lower is better)
Translates to: RIWLKWCMMRVKCSRDYLRLLHG*PSTASG
Trigger: CCCACTAGCCGTGGAGGGGCATCCGTGGAGGAGACG...CAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGCTCAACACCAGGGCCCCTaGTCCTTTCAACTACCATTT +
Preference number: 4 (lower is better)
Translates to: DEGKMQQGLSEPCGSQGAQHQGP*SFQLPF
Trigger: AAATGGTAGTTGAAAGGAGCAGGGGCCCTGGTGTTG...AGCTCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp CCCTGTGTAAGGCACACACACGCCGGGAAGATCCAAGTACAGTGCCCACTGGAATCTACTGAACCCTGGTaGACACCCAGAATTAACCAT +
Preference number: 4 (lower is better)
Translates to: PCVRHTHAGKIQVQCPLESTEPW*TPRINH
Trigger: ATGGTTAATTCTGGGTGTGCACCAGGGTTCAGTAGA...TTCCAGTGGGCACTGTACTTGGATCTTCCCGGCGTGTGTGTGCCTTACACAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGACAGAGGCATTGCCATaGCTCCGATTGCACCAGGAA +
Preference number: 4 (lower is better)
Translates to: VHDEGKMQQGLSEPCGSQTEALP*LRLHQE
Trigger: TTCCTGGTGCAATCGGAGGCATGGCAATGCCTCTGT...CTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS-3UTR GCA 90 bp ATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGTCTGAACAGAGGCATTaGCATGCCTCCGATTGCACC +
Preference number: 4 (lower is better)
Translates to: MMRVKCSRDYLNRVGARESEQRH*HASDCT
Trigger: GGTGCAATCGGAGGCATGGCAATGCCTCTGTTCAGA...CTCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS-3UTR GCA 90 bp TGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGAGGAAGGAAGGAATGTaGTCGCATGTGCGAGTGGCT +
Preference number: 4 (lower is better)
Translates to: CMMRVKCSRDYLNRVGARRKEGM*SHVRVA
Trigger: AGCCACTCGCACATGCGAGCACATTCCTTCCTTCCT...CCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS-3UTR CCA 90 bp CTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGAACCGGCGGGCCACCTaGAAAAAGAGCACAGCCCGA +
Preference number: 4 (lower is better)
Translates to: LKWCMMRVKCSRDYLNRVNRRAT*KKSTAR
Trigger: TCGGGCTGTGCTCTTTTTCCAGGTGGCCCGCCGGTT...CACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000206249.8
CDS-3UTR CCA 90 bp ATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCATGGTCATGGTCCGTaGCCGCGGGCAGGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: IWLKWCMMRVKCSRDYLNHGHGP*PRAGCR
Trigger: TCTGCACCCTGCCCGCGGCCACGGACCATGACCATG...GTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp CATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGACCAGATGCTTTGGTGTaGAGGGTCATGGTCATGGTC +
Preference number: 4 (lower is better)
Translates to: HDEGKMQQGLSEPCGSQGPDALV*RVMVMV
Trigger: GACCATGACCATGACCCTCCACACCAAAGCATCTGG...TCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCCCAGATGCTTTGGTGTaGAGGGTCATGGTCATGGTC +
Preference number: 4 (lower is better)
Translates to: WCMMRVKCSRDYLNRVGAPDALV*RVMVMV
Trigger: GACCATGACCATGACCCTCCACACCAAAGCATCTGG...GGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp AGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGAGCACCGTGTAGCCGCTaGGCTCGTTCTCCAGGTAGT +
Preference number: 4 (lower is better)
Translates to: RRQNLAKVVHDEGKMQQGAPCSR*ARSPGS
Trigger: ACTACCTGGAGAACGAGCCCAGCGGCTACACGGTGC...TCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp GGGCAGCCAGCTGCACGGACAGTCACTGAATATTGTGTGTTCTCTCTGTCCCCACCTTGTCATTGGTACTaGCCAATCTTTCTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: GQPAARTVTEYCVFSLSPPCHWY*PIFLCH
Trigger: GTGGCAGAGAAAGATTGGCCAGTACCAATGACAAGG...TGGGGACAGAGAGAACACACAATATTCAGTGACTGTCCGTGCAGCTGGCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CCA 90 bp GTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGCAAATCCACAAAGCCTaGCACCCTCTTCGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: VHDEGKMQQGLSEPCGSQQIHKA*HPLRPV
Trigger: AACTGGGCGAAGAGGGTGCCAGGCTTTGTGGATTTG...CTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp AGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATCCCTGGGTGCTCCATaGAGCGCCAGACGAGACCAA +
Preference number: 4 (lower is better)
Translates to: RRQNLAKVVHDEGKMQQGSLGAP*SARRDQ
Trigger: TTGGTCTCGTCTGGCGCTCCATGGAGCACCCAGGGA...TCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp CTTTCCCTCTTGTTCTCTAGTAGCCACAACAATCCTGCACAAGTACTGTTCAGCTCCCTGGGTGCTCCATaGAGCGCCAGACGAGACCAA +
Preference number: 4 (lower is better)
Translates to: LSLLFSSSHNNPAQVLFSSLGAP*SARRDQ
Trigger: TTGGTCTCGTCTGGCGCTCCATGGAGCACCCAGGGA...GCTGAACAGTACTTGTGCAGGATTGTTGTGGCTACTAGAGAACAAGAGGGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp GTTTCTGCCCTACTTTCCCTCTTGTTCTCTAGTAGCCACAACAATCCTGCACAATCCCTGGGTGCTCCATaGAGCGCCAGACGAGACCAA +
Preference number: 4 (lower is better)
Translates to: VSALLSLLFSSSHNNPAQSLGAP*SARRDQ
Trigger: TTGGTCTCGTCTGGCGCTCCATGGAGCACCCAGGGA...TTGTGCAGGATTGTTGTGGCTACTAGAGAACAAGAGGGAAAGTAGGGCAGAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp ATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGCTCGCCTTGGCCATCAGGTaGATCAAAGTGTCTGTGATC +
Preference number: 4 (lower is better)
Translates to: MRVKCSRDYLNRVGARELALAIR*IKVSVI
Trigger: GATCACAGACACTTTGATCCACCTGATGGCCAAGGC...GAGCTCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp GCAGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGGGTCAGGCCTGCCTTaGCCATCAGGTGGATCAAAG +
Preference number: 4 (lower is better)
Translates to: AGDRIWLKWCMMRVKCSRGSGLP*PSGGSK
Trigger: CTTTGATCCACCTGATGGCCAAGGCAGGCCTGACCC...CCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp AGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTAAGGATGAGGAGGAGCTaGGCCAGCCGCTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: RQNLAKVVHDEGKMQQGLRMRRS*ASRWCC
Trigger: GCAGCACCAGCGGCTGGCCCAGCTCCTCCTCATCCT...TAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp CAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGGCGCATGTAGGCGGTaGGCGTCCAGCATCTCCAGC +
Preference number: 4 (lower is better)
Translates to: QNLAKVVHDEGKMQQGLSGACRR*ASSISS
Trigger: GCTGGAGATGCTGGACGCCCACCGCCTACATGCGCC...AGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp ATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACGGCGCATGTAGGCGGTaGGCGTCCAGCATCTCCAGC +
Preference number: 4 (lower is better)
Translates to: IWLKWCMMRVKCSRDYLNGACRR*ASSISS
Trigger: GCTGGAGATGCTGGACGCCCACCGCCTACATGCGCC...GTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp GCAGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGTGGCCAAGTGGCTTTaGTCCGTCTCCTCCACGGAT +
Preference number: 4 (lower is better)
Translates to: AGDRIWLKWCMMRVKCSRVAKWL*SVSSTD
Trigger: ATCCGTGGAGGAGACGGACCAAAGCCACTTGGCCAC...CCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGGGAGCTCTCAGACCGTaGCAGGGAAACCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: LAKVVHDEGKMQQGLSEPGALRP*QGNPLP
Trigger: AGGCAGAGGGTTTCCCTGCCACGGTCTGAGAGCTCC...CGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGGAGCTCTCAGACCGTaGCAGGGAAACCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: WLKWCMMRVKCSRDYLNRGALRP*QGNPLP
Trigger: AGGCAGAGGGTTTCCCTGCCACGGTCTGAGAGCTCC...ACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCCACCCTGAGCAAGTCTaGCTGTGCCTCAGAACTGTA +
Preference number: 4 (lower is better)
Translates to: WCMMRVKCSRDYLNRVGAHPEQV*LCLRTV
Trigger: TACAGTTCTGAGGCACAGCCAGACTTGCTCAGGGTG...GGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp CCATTGGTGTTGGATGCATGCCGGAGTGTATGCAGGAGACAGAATTTGGCTAAACGTGCCCCAGGGTGCTaGGCCAATTGTAGGAACACA +
Preference number: 4 (lower is better)
Translates to: PLVLDACRSVCRRQNLAKRAPGC*ANCRNT
Trigger: TGTGTTCCTACAATTGGCCCAGCACCCTGGGGCACG...TTTAGCCAAATTCTGTCTCCTGCATACACTCCGGCATGCATCCAACACCAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp ATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGCTCGATTTCCAAAGTTGCTaGAGACCCCTGGGCGAACAT +
Preference number: 4 (lower is better)
Translates to: MRVKCSRDYLNRVGARELDFQSC*RPLGEH
Trigger: ATGTTCGCCCAGGGGTCTCCAGCAACTTTGGAAATC...GAGCTCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCCCAGTGGCGTTCACATaGATCCACCTCTTGACCACT +
Preference number: 4 (lower is better)
Translates to: WCMMRVKCSRDYLNRVGAPVAFT*IHLLTT
Trigger: AGTGGTCAAGAGGTGGATCCATGTGAACGCCACTGG...GGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS-3UTR CCA 90 bp GATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGCTTCTCTCATTTCCCAGTaGCGTTCACATGGATCCACC +
Preference number: 4 (lower is better)
Translates to: DEGKMQQGLSEPCGSQGASLISQ*RSHGST
Trigger: GGTGGATCCATGTGAACGCCACTGGGAAATGAGAGA...AGCTCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS-3UTR CCA 90 bp AGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGCGGCAGACACGCAGCTaGGCTACTGCACAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: RIWLKWCMMRVKCSRDYLRQTRS*ATAQRW
Trigger: CCAGCGCTGTGCAGTAGCCCAGCTGCGTGTCTGCCG...CAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS-3UTR CCA 90 bp GCAGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGGCGGGCCACCCTGCTaGATCAAGAACGTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: AGDRIWLKWCMMRVKCSRGGPPC*IKNVFP
Trigger: TGGAAAGACGTTCTTGATCCAGCAGGGTGGCCCGCC...CCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS-3UTR TCA 90 bp TGCACAGCTCTAAACACACACACTGACGATGGGTTTGGAACATGGCAGCATTTACATCCAACAAGGCACTaGCCATCTGGTCGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: CTALNTHTDDGFGTWQHLHPTRH*PSGRPS
Trigger: TGACGGCCGACCAGATGGTCAGTGCCTTGTTGGATG...TAAATGCTGCCATGTTCCAAACCCATCGTCAGTGTGTGTGTTTAGAGCTGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp TGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTCATCCAACAAGGCACTaGCCATCTGGTCGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: WLKWCMMRVKCSRDYLNRHPTRH*PSGRPS
Trigger: TGACGGCCGACCAGATGGTCAGTGCCTTGTTGGATG...ACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp GGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATGCCCAGTTGATCATGTaGACCAGCTCCCTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: GDRIWLKWCMMRVKCSRDAQLIM*TSSLSA
Trigger: GGCAGACAGGGAGCTGGTTCACATGATCAACTGGGC...ATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp AGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGACCCTCTTCGCCCAGTTaGTCATGTGAACCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: RRQNLAKVVHDEGKMQQGPSSPS*SCEPAP
Trigger: GGGAGCTGGTTCACATGATCAACTGGGCGAAGAGGG...TCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp GCAAGGGGGAAAGAGAGCTGTTACAAAGATTTAGCCTTGGAATCCCTTTGGCTGCATGCGGAACCGAGATaGTGTAGCCAGCAGCATGTC +
Preference number: 4 (lower is better)
Translates to: ARGKESCYKDLALESLWLHAEPR*CSQQHV
Trigger: GACATGCTGCTGGCTACATCATCTCGGTTCCGCATG...CAGCCAAAGGGATTCCAAGGCTAAATCTTTGTAACAGCTCTCTTTCCCCCTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp CCATTGGTGTTGGATGCATGCCGGAGTGTATGCAGGAGACAGAATTTGGCTAAATTGCAAGGAATGCGATaGAGTAGAGCCCGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: PLVLDACRSVCRRQNLAKLQGMR*SRARSG
Trigger: GCCACTGCGGGCTCTACTTCATCGCATTCCTTGCAA...TTTAGCCAAATTCTGTCTCCTGCATACACTCCGGCATGCATCCAACACCAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp ATTGTGCTAGAGAAGCAAAGGCCCAGGGAAGGCTGCCCTGTGGCTGGAATGAGCAGCTTTCAGCACATCTaGATCTGCAGTGTATCAAGT +
Preference number: 4 (lower is better)
Translates to: IVLEKQRPREGCPVAGMSSFQHI*ICSVSS
Trigger: ACTTGATACACTGCAGATTCAGATGTGCTGAAAGCT...GCTCATTCCAGCCACAGGGCAGCCTTCCCTGGGCCTTTGCTTCTCTAGCACAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp CTTTCCCTCTTGTTCTCTAGTAGCCACAACAATCCTGCACAAGTACTGTTCAGCGGCCACGCTGGGAAATaGAGAAGAGCTGGACTACCC +
Preference number: 4 (lower is better)
Translates to: LSLLFSSSHNNPAQVLFSGHAGK*RRAGLP
Trigger: GGGTAGTCCAGCTCTTCTTCATTTCCCAGCGTGGCC...GCTGAACAGTACTTGTGCAGGATTGTTGTGGCTACTAGAGAACAAGAGGGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp GCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGCCACGCTGGGAAATaGAGAAGAGCTGGACTACCC +
Preference number: 4 (lower is better)
Translates to: AKVVHDEGKMQQGLSEPCGHAGK*RRAGLP
Trigger: GGGTAGTCCAGCTCTTCTTCATTTCCCAGCGTGGCC...ACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp GCAGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGAGAAGTGGACTCTACTaGACCCTGGTGCACACCCAG +
Preference number: 4 (lower is better)
Translates to: AGDRIWLKWCMMRVKCSRRSGLY*TLVHTQ
Trigger: CTGGGTGTGCACCAGGGTTCAGTAGAGTCCACTTCT...CCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp TGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCCAAGAAGTGCTGTGCTaGTATTTGGTACCGCAGTCC +
Preference number: 4 (lower is better)
Translates to: WCMMRVKCSRDYLNRVGAQEVLC*YLVPQS
Trigger: GGACTGCGGTACCAAATATCAGCACAGCACTTCTTG...GGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440973.5
CDS-3UTR TCA 90 bp CGAGAAGGGGGAAAGCGCTTATGTTATGATGCAACGCCAACAGCAGTCACTCTTTCTAGCTACAGGTGTTaGGTGTTGGTTGCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: REGGKRLCYDATPTAVTLSSYRC*VLVARA
Trigger: TGCCCTGGCAACCAACACTCAACACCTGTAGCTAGA...AAGAGTGACTGCTGTTGGCGTTGCATCATAACATAAGCGCTTTCCCCCTTCTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR GCA 90 bp ATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACAGGGGGATCTTGAGCTaGGGACGGTTCAGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: IWLKWCMMRVKCSRDYLNRGILS*GRFRGS
Trigger: GGAGCCCCTGAACCGTCCGCAGCTCAAGATCCCCCT...GTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp AGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAGGGGGATCTTGAGCTaGGGACGGTTCAGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: RIWLKWCMMRVKCSRDYLRGILS*GRFRGS
Trigger: GGAGCCCCTGAACCGTCCGCAGCTCAAGATCCCCCT...CAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATAGGGGGATCTTGAGCTaGGGACGGTTCAGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: DRIWLKWCMMRVKCSRDYRGILS*GRFRGS
Trigger: GGAGCCCCTGAACCGTCCGCAGCTCAAGATCCCCCT...ATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp AAATACAAAGAGATTTCCAAAGTTGCTGGAGACCCCTGGGCGAACATTTCAATCACACGGCGGGCTTGCTaGTGTCCAGGTACACCTCGC +
Preference number: 4 (lower is better)
Translates to: KYKEISKVAGDPWANISITRRAC*CPGTPR
Trigger: GCGAGGTGTACCTGGACAGCAGCAAGCCCGCCGTGT...GATTGAAATGTTCGCCCAGGGGTCTCCAGCAACTTTGGAAATCTCTTTGTATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp ATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACACACGGCGGGCTTGCTaGTGTCCAGGTACACCTCGC +
Preference number: 4 (lower is better)
Translates to: IWLKWCMMRVKCSRDYLNTRRAC*CPGTPR
Trigger: GCGAGGTGTACCTGGACAGCAGCAAGCCCGCCGTGT...GTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp AGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGACACGGCGGGCTTGCTaGTGTCCAGGTACACCTCGC +
Preference number: 4 (lower is better)
Translates to: RIWLKWCMMRVKCSRDYLTRRAC*CPGTPR
Trigger: GCGAGGTGTACCTGGACAGCAGCAAGCCCGCCGTGT...CAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTTGTACACGGCGGGCTTaGTGCTGTCCAGGTACACCT +
Preference number: 4 (lower is better)
Translates to: WLKWCMMRVKCSRDYLNRCTRRA*CCPGTP
Trigger: AGGTGTACCTGGACAGCAGCAAGCCCGCCGTGTACA...ACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGTGGCCAATCTTTCTCTaGCACCCTGGCGTCGATTAT +
Preference number: 4 (lower is better)
Translates to: VHDEGKMQQGLSEPCGSQWPIFL*HPGVDY
Trigger: ATAATCGACGCCAGGGTGGCAGAGAAAGATTGGCCA...CTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GGCAGGGAAACCCTCTGCCTCCCCCGTGATGTAATACTTTTGCAAGGAATGCGACCAGAGACTTCAGGGTaGTGGACAGAAATGTGTACA +
Preference number: 4 (lower is better)
Translates to: GRETLCLPRDVILLQGMRPETSG*WTEMCT
Trigger: TGTACACATTTCTGTCCAGCACCCTGAAGTCTCTGG...TCGCATTCCTTGCAAAAGTATTACATCACGGGGGAGGCAGAGGGTTTCCCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR GCA 90 bp TATGGTTGCCTTTTGAGCTACTGTATGACTCTATTTGCCTTTCACATAACTAGCTGGGCCAGCCGCTGGTaGTGCTGCTGCAGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: YGCLLSYCMTLFAFHITSWASRW*CCCRVR
Trigger: CCTGACCCTGCAGCAGCAGCACCAGCGGCTGGCCCA...GCTAGTTATGTGAAAGGCAAATAGAGTCATACAGTAGCTCAAAAGGCAACCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGCTCCTTTGTTACTCATGTaGCTGATGTGGGAGAGGATG +
Preference number: 4 (lower is better)
Translates to: DEGKMQQGLSEPCGSQGAPLLLM*LMWERM
Trigger: CATCCTCTCCCACATCAGGCACATGAGTAACAAAGG...AGCTCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TGCAAGGAATGCGATGAAGTAGAGCCCGCAGTGGCCAAGTGGCTTTGGTCCGTCTTCATGCTGTACAGATaGTCCATGCCTTTGTTACTC +
Preference number: 4 (lower is better)
Translates to: CKECDEVEPAVAKWLWSVFMLYR*SMPLLL
Trigger: GAGTAACAAAGGCATGGAGCATCTGTACAGCATGAA...GACGGACCAAAGCCACTTGGCCACTGCGGGCTCTACTTCATCGCATTCCTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR GCA 90 bp CACACAAACTCCTCTCCCTGCAGATTCATCATGCGGAACCGAGATGATGTAGCCGGGGCACCACGTTCTTaGACTTCATGCTGTACAGAT +
Preference number: 4 (lower is better)
Translates to: HTNSSPCRFIMRNRDDVAGAPRS*TSCCTD
Trigger: ATCTGTACAGCATGAAGTGCAAGAACGTGGTGCCCC...GGCTACATCATCTCGGTTCCGCATGATGAATCTGCAGGGAGAGGAGTTTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR GCA 90 bp GCAGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGGCAGGGAAACCCTCTaGCTCCCCCGTGATGTAATA +
Preference number: 4 (lower is better)
Translates to: AGDRIWLKWCMMRVKCSRGRETL*LPRDVI
Trigger: TATTACATCACGGGGGAGGCAGAGGGTTTCCCTGCC...CCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCGCATGCCGGAGTGTATaGAGGAGACAGAATTTGGCT +
Preference number: 4 (lower is better)
Translates to: WCMMRVKCSRDYLNRVGAACRSV*RRQNLA
Trigger: AGCCAAATTCTGTCTCCTGCATACACTCCGGCATGC...GGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCGCATGCCGGAGTGTATaGAGGAGACAGAATTTGGCT +
Preference number: 4 (lower is better)
Translates to: VVHDEGKMQQGLSEPCGSACRSV*RRQNLA
Trigger: AGCCAAATTCTGTCTCCTGCATACACTCCGGCATGC...GCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCTTGGTGTTGGATGCATaGCGGAGTGTATGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: WCMMRVKCSRDYLNRVGALVLDA*RSVCRR
Trigger: TCTCCTGCATACACTCCGGCATGCATCCAACACCAA...GGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGCAAGTCTGGCTGTaGCTCAGAACTGTATCCAGT +
Preference number: 4 (lower is better)
Translates to: CMMRVKCSRDYLNRVGAREQVWL*LRTVSS
Trigger: ACTGGATACAGTTCTGAGGCACAGCCAGACTTGCTC...CCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp AAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGACCCCCAAAGGGCAATaGGGGGTCTGCAAGGAATGT +
Preference number: 4 (lower is better)
Translates to: KVVHDEGKMQQGLSEPCGTPKGQ*GVCKEC
Trigger: ACATTCCTTGCAGACCCCGCATTGCCCTTTGGGGGT...CCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp AGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGAGGGAGACTTGCTGTCTaGTCACAGGGAGCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: RRQNLAKVVHDEGKMQQGGRLAV*SQGAVW
Trigger: CCACACTGCTCCCTGTGAGCAGACAGCAAGTCTCCC...TCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS-3UTR GCA 90 bp AAAATGTCGAAGGCATCGTTTCTTAGGGCAGCAAGTGCTTCCTCATGCCTCCTACCACTACTCCCTCCCTaGCATTCTCCTTATCCCGCA +
Preference number: 4 (lower is better)
Translates to: KMSKASFLRAASASSCLLPLLPP*HSPYPA
Trigger: TGCGGGATAAGGAGAATGGCAGGGAGGGAGTAGTGG...TAGGAGGCATGAGGAAGCACTTGCTGCCCTAAGAAACGATGCCTTCGACATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR GCA 90 bp CGAGAAGGGGGAAAGCGCTTATGTTATGATGCAACGCCAACAGCAGTCACTCTTACGAGCATCCGCAGATaGTCTAAGGTTTGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: REGGKRLCYDATPTAVTLTSIRR*SKVCSA
Trigger: GGCTGAGCAAACCTTAGAGCATCTGCGGATGCTCGT...AAGAGTGACTGCTGTTGGCGTTGCATCATAACATAAGCGCTTTCCCCCTTCTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR GCA 90 bp TGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCCTTTCTCTAATGTGCTaGCTTATGTGCCCCGTGCCA +
Preference number: 4 (lower is better)
Translates to: WCMMRVKCSRDYLNRVGALSLMC*LMCPVP
Trigger: TGGCACGGGGCACATAAGGCAGCACATTAGAGAAAG...GGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443427.5
CDS-3UTR CCA 90 bp GACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATTGGTGTGGAGGGTCATaGTCATGGTCCGTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: DRIWLKWCMMRVKCSRDYWCGGS*SWSVAA
Trigger: CGCGGCCACGGACCATGACCATGACCCTCCACACCA...ATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp GATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGCTCCTTGTCATTGGTACTaGCCAATCTTTCTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: DEGKMQQGLSEPCGSQGAPCHWY*PIFLCH
Trigger: GTGGCAGAGAAAGATTGGCCAGTACCAATGACAAGG...AGCTCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp ATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGCTCCCTTGTCATTGGTACTaGCCAATCTTTCTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: MRVKCSRDYLNRVGARELPCHWY*PIFLCH
Trigger: GTGGCAGAGAAAGATTGGCCAGTACCAATGACAAGG...GAGCTCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp GATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGCTGCACTGGTTGGTGGCTaGACACATATAGTCGTTATG +
Preference number: 4 (lower is better)
Translates to: DEGKMQQGLSEPCGSQGAALVGG*THIVVM
Trigger: CATAACGACTATATGTGTCCAGCCACCAACCAGTGC...AGCTCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp CGGAACCGAGATGATGTAGCCAGCAGCATGTCGAAGATCTCCACCATGCCCTCTTCCTGTTTTTATCAATaGTGCACTGGTTGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: RNRDDVASSMSKISTMPSSCFYQ*CTGWWL
Trigger: CAGCCACCAACCAGTGCACCATTGATAAAAACAGGA...AGAGGGCATGGTGGAGATCTTCGACATGCTGCTGGCTACATCATCTCGGTTCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR CCA 90 bp ATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGGAGCCGGCAGGCCTaGCAGCTCTTCCTCCTGTTT +
Preference number: 4 (lower is better)
Translates to: IWLKWCMMRVKCSRDYLNRSRQA*QLFLLF
Trigger: AAACAGGAGGAAGAGCTGCCAGGCCTGCCGGCTCCG...GTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp AAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGGATCATGAGCGGGCTTaGCCAAAGGTTGGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: KVVHDEGKMQQGLSEPCGDHERA*PKVGSS
Trigger: AGAGCTGCCAACCTTTGGCCAAGCCCGCTCATGATC...CCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp GCAGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGCCCTGTCTGCCAGGTTaGTCAGTAAGCCCATCATCG +
Preference number: 4 (lower is better)
Translates to: AGDRIWLKWCMMRVKCSRPCLPG*SVSPSS
Trigger: CGATGATGGGCTTACTGACCAACCTGGCAGACAGGG...CCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp CAGCATGTCGAAGATCTCCACCATGCCCTCTACACATTTTCCCTGGTTCCACCTAGGACTCGGTGGATATaGTCCTTCTCTTCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: QHVEDLHHALYTFSLVPPRTRWI*SFSSRD
Trigger: GTCTCTGGAAGAGAAGGACCATATCCACCGAGTCCT...AGGTGGAACCAGGGAAAATGTGTAGAGGGCATGGTGGAGATCTTCGACATGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR CCA 90 bp GTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCGCCTTGGCCATCAGGTaGATCAAAGTGTCTGTGATC +
Preference number: 4 (lower is better)
Translates to: VVHDEGKMQQGLSEPCGSALAIR*IKVSVI
Trigger: GATCACAGACACTTTGATCCACCTGATGGCCAAGGC...GCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp CCCTACTTTCCCTCTTGTTCTCTAGTAGCCACAACAATCCTGCACAAGTACTGTGGGTCAGGCCTGCCTTaGCCATCAGGTGGATCAAAG +
Preference number: 4 (lower is better)
Translates to: PYFPSCSLVATTILHKYCGSGLP*PSGGSK
Trigger: CTTTGATCCACCTGATGGCCAAGGCAGGCCTGACCC...ACAGTACTTGTGCAGGATTGTTGTGGCTACTAGAGAACAAGAGGGAAAGTAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp GCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGTCAGGCCTGCCTTaGCCATCAGGTGGATCAAAG +
Preference number: 4 (lower is better)
Translates to: AKVVHDEGKMQQGLSEPCGSGLP*PSGGSK
Trigger: CTTTGATCCACCTGATGGCCAAGGCAGGCCTGACCC...ACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp AAAGGCATGGGCTATGGCTTGGTTAAACATATCTGCAAGGTTACTAGGGAAATCCCCGCAGTGGCCAAGTaGCTTTGGTCCGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: KGMGYGLVKHICKVTREIPAVAK*LWSVSS
Trigger: GGAGGAGACGGACCAAAGCCACTTGGCCACTGCGGG...GATTTCCCTAGTAACCTTGCAGATATGTTTAACCAAGCCATAGCCCATGCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp GTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGAAATGAAGAAGAGCTaGACTACCCCAGGGATCCCA +
Preference number: 4 (lower is better)
Translates to: VHDEGKMQQGLSEPCGSQEMKKS*TTPGIP
Trigger: TGGGATCCCTGGGGTAGTCCAGCTCTTCTTCATTTC...CTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp GTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGATTTCCAAAGTTGCTaGAGACCCCTGGGCGAACAT +
Preference number: 4 (lower is better)
Translates to: VHDEGKMQQGLSEPCGSQDFQSC*RPLGEH
Trigger: ATGTTCGCCCAGGGGTCTCCAGCAACTTTGGAAATC...CTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCGAGCTAGTTGATTTGTaGTCTCCAGGGCAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: WCMMRVKCSRDYLNRVGAELVDL*SPGQKW
Trigger: CCACTTCTGCCCTGGAGACCACAAATCAACTAGCTC...GGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp CATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGACGGCAAGCTAGGCAATaGCGAAAAGAAACACAGACC +
Preference number: 4 (lower is better)
Translates to: HDEGKMQQGLSEPCGSQGRQARQ*RKETQT
Trigger: GGTCTGTGTTTCTTTTCGCCATTGCCTAGCTTGCCG...TCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp ATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACGGAGTGGCCGGTCTCTaGCCCTGGGACACTATGCAG +
Preference number: 4 (lower is better)
Translates to: IWLKWCMMRVKCSRDYLNGVAGL*PWDTMQ
Trigger: CTGCATAGTGTCCCAGGGCCAGAGACCGGCCACTCC...GTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS-3UTR CCA 90 bp AGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCACAATGCCAGGAGTaGCCGGTCTCTGGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: RQNLAKVVHDEGKMQQGLSQCQE*PVSGPG
Trigger: CCCAGGGCCAGAGACCGGCCACTCCTGGCATTGTGA...TAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS-3UTR TCA 90 bp CTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGCATGCGGAACCGAGATaGTGTAGCCAGCAGCATGTC +
Preference number: 4 (lower is better)
Translates to: LKWCMMRVKCSRDYLNRVHAEPR*CSQQHV
Trigger: GACATGCTGCTGGCTACATCATCTCGGTTCCGCATG...CACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp TTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGCATGCGGAACCGAGATaGTGTAGCCAGCAGCATGTC +
Preference number: 4 (lower is better)
Translates to: LAKVVHDEGKMQQGLSEPHAEPR*CSQQHV
Trigger: GACATGCTGCTGGCTACATCATCTCGGTTCCGCATG...CGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp GTCGAAGATCTCCACCATGCCCTCTACACATTTTCCCTGGTTCCACCTTTCATCGGATCAAAGTGTCTGTaGTCTTGTCCAGGACTCGGT +
Preference number: 4 (lower is better)
Translates to: VEDLHHALYTFSLVPPFIGSKCL*SCPGLG
Trigger: ACCGAGTCCTGGACAAGATCACAGACACTTTGATCC...GATGAAAGGTGGAACCAGGGAAAATGTGTAGAGGGCATGGTGGAGATCTTCGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR TCA 90 bp TGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTTTGCAAGGAATGCGATaGAGTAGAGCCCGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: WLKWCMMRVKCSRDYLNRLQGMR*SRARSG
Trigger: GCCACTGCGGGCTCTACTTCATCGCATTCCTTGCAA...ACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp AAATACAAAGAGATTTCCAAAGTTGCTGGAGACCCCTGGGCGAACATTTCAATCGCAGCAGGGATTATCTaGACCGTGTGGGAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: KYKEISKVAGDPWANISIAAGII*TVWEPG
Trigger: CCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGC...GATTGAAATGTTCGCCCAGGGGTCTCCAGCAACTTTGGAAATCTCTTTGTATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp TCTACTGAACCCTGGTGCACACCCAGAATTAACCATTTTCCTCCAAATACTTTCAGGCCCCAGTCAGCCTaGGTAGTGACAGCAACGGTC +
Preference number: 4 (lower is better)
Translates to: STEPWCTPRINHFPPNTFRPQSA*VVTATV
Trigger: GACCGTTGCTGTCACTACTCAGGCTGACTGGGGCCT...GAAAGTATTTGGAGGAAAATGGTTAATTCTGGGTGTGCACCAGGGTTCAGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp AAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGAGTGGCTCAGTGTGTaGACTAGGCAGAGAGAGTGT +
Preference number: 4 (lower is better)
Translates to: KWCMMRVKCSRDYLNRVGEWLSV*TRQREC
Trigger: ACACTCTCTCTGCCTAGTTCACACACTGAGCCACTC...TCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS-3UTR TCA 90 bp GGGCAGCCAGCTGCACGGACAGTCACTGAATATTGTGTGTTCTCTCTGTCCCCACTCACAAGAATCCCATaGCATGGCTATATTCCCAAT +
Preference number: 4 (lower is better)
Translates to: GQPAARTVTEYCVFSLSPLTRIP*HGYIPN
Trigger: ATTGGGAATATAGCCATGTCATGGGATTCTTGTGAG...TGGGGACAGAGAGAACACACAATATTCAGTGACTGTCCGTGCAGCTGGCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR TCA 90 bp AACTCTTGGGGACTTTTGAAGATAATGACGAGCATCCGCAGATGCTCTAAGGTTACCCAACCCCGAGAATaGAAGGCAGAGTCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: NSWGLLKIMTSIRRCSKVTQPRE*KAESAG
Trigger: CCCAGCAGACTCTGCCTTTCATTCTCGGGGTTGGGT...AACCTTAGAGCATCTGCGGATGCTCGTCATTATCTTCAAAAGTCCCCAAGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR GCA 90 bp GACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATAGTAGCTTCCCTGGGTaGTCCATGGAGCGCCAGACG +
Preference number: 4 (lower is better)
Translates to: DRIWLKWCMMRVKCSRDYSSFPG*SMERQT
Trigger: CGTCTGGCGCTCCATGGAGCACCCAGGGAAGCTACT...ATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp AGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTAAGTAGCTTCCCTGGGTaGTCCATGGAGCGCCAGACG +
Preference number: 4 (lower is better)
Translates to: RQNLAKVVHDEGKMQQGLSSFPG*SMERQT
Trigger: CGTCTGGCGCTCCATGGAGCACCCAGGGAAGCTACT...TAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp CAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTAGTAGCTTCCCTGGGTaGTCCATGGAGCGCCAGACG +
Preference number: 4 (lower is better)
Translates to: QNLAKVVHDEGKMQQGLSSSFPG*SMERQT
Trigger: CGTCTGGCGCTCCATGGAGCACCCAGGGAAGCTACT...AGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCCGAAGATCTCCACCATaGCCTCTACACATTTTCCCT +
Preference number: 4 (lower is better)
Translates to: WCMMRVKCSRDYLNRVGARRSPP*PLHIFP
Trigger: AGGGAAAATGTGTAGAGGGCATGGTGGAGATCTTCG...GGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCACAAACTCCTCTCCCTaGAGATTCATCATGCGGAAC +
Preference number: 4 (lower is better)
Translates to: WCMMRVKCSRDYLNRVGATNSSP*RFIMRN
Trigger: GTTCCGCATGATGAATCTGCAGGGAGAGGAGTTTGT...GGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GTGATCTTGTCCAGGACTCGGTGGATATGGTCCTTCTCTTCCAGAGACTTCAGGACAAACTCCTCTCCCTaGAGATTCATCATGCGGAAC +
Preference number: 4 (lower is better)
Translates to: VILSRTRWIWSFSSRDFRTNSSP*RFIMRN
Trigger: GTTCCGCATGATGAATCTGCAGGGAGAGGAGTTTGT...CCTGAAGTCTCTGGAAGAGAAGGACCATATCCACCGAGTCCTGGACAAGATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR GCA 90 bp CATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGACCAGAGACTTCAGGGTaGTGGACAGAAATGTGTACA +
Preference number: 4 (lower is better)
Translates to: HDEGKMQQGLSEPCGSQGPETSG*WTEMCT
Trigger: TGTACACATTTCTGTCCAGCACCCTGAAGTCTCTGG...TCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp AAAGGCATGGGCTATGGCTTGGTTAAACATATCTGCAAGGTTACTAGGGAAATCCTGCAGGGTCAGGCCTaGCTTGGCCATCAGGTGGAT +
Preference number: 4 (lower is better)
Translates to: KGMGYGLVKHICKVTREILQGQA*LGHQVD
Trigger: ATCCACCTGATGGCCAAGGCAGGCCTGACCCTGCAG...GATTTCCCTAGTAACCTTGCAGATATGTTTAACCAAGCCATAGCCCATGCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp ATTGTGCTAGAGAAGCAAAGGCCCAGGGAAGGCTGCCCTGTGGCTGGAATGAGCATGATGAGGGTAAAATaGAGCAGGGATTATCTGAAC +
Preference number: 4 (lower is better)
Translates to: IVLEKQRPREGCPVAGMSMMRVK*SRDYLN
Trigger: GTTCAGATAATCCCTGCTGCATTTTACCCTCATCAT...GCTCATTCCAGCCACAGGGCAGCCTTCCCTGGGCCTTTGCTTCTCTAGCACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp ATTGTGCTAGAGAAGCAAAGGCCCAGGGAAGGCTGCCCTGTGGCTGGAATGAGCCATAAAAGGATGCATTaGCATAGGAATACAAGAGGG +
Preference number: 4 (lower is better)
Translates to: IVLEKQRPREGCPVAGMSHKRMH*HRNTRG
Trigger: CCCTCTTGTATTCCTATGGCAATGCATCCTTTTATG...GCTCATTCCAGCCACAGGGCAGCCTTCCCTGGGCCTTTGCTTCTCTAGCACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp CAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTTGCCCCAGGGCTAAATaGAACACCAGGGCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: QNLAKVVHDEGKMQQGLSCPRAK*NTRAPA
Trigger: AGCAGGGGCCCTGGTGTTGCATTTAGCCCTGGGGCA...AGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp CTTTCCCTCTTGTTCTCTAGTAGCCACAACAATCCTGCACAAGTACTGTTCAGCAGCAGCTGTGACAGCTaGTTCTTCCAACCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: LSLLFSSSHNNPAQVLFSSSCDS*FFQPGP
Trigger: TGGCCCTGGTTGGAAGAAGCAGCTGTCACAGCTGCT...GCTGAACAGTACTTGTGCAGGATTGTTGTGGCTACTAGAGAACAAGAGGGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TGCAGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGAGCAGCTGTGACAGCTaGTTCTTCCAACCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: CRRQNLAKVVHDEGKMQQSSCDS*FFQPGP
Trigger: TGGCCCTGGTTGGAAGAAGCAGCTGTCACAGCTGCT...CTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TCTACTGAACCCTGGTGCACACCCAGAATTAACCATTTTCCTCCAAATACTTTCTCCCGTGCCCCAGGGTaGTGGGCCAATTGTAGGAAC +
Preference number: 4 (lower is better)
Translates to: STEPWCTPRINHFPPNTFSRAPG*WANCRN
Trigger: GTTCCTACAATTGGCCCAGCACCCTGGGGCACGGGA...GAAAGTATTTGGAGGAAAATGGTTAATTCTGGGTGTGCACCAGGGTTCAGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGCACGCTCCCAAGACCTaGACCAAAGAGAATTATGGT +
Preference number: 4 (lower is better)
Translates to: VHDEGKMQQGLSEPCGSQHAPKT*TKENYG
Trigger: ACCATAATTCTCTTTGGTGCAGGTCTTGGGAGCGTG...CTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCTGTGTCTCAGGCACCTaGTCATGGGACAATATGTTG +
Preference number: 4 (lower is better)
Translates to: WCMMRVKCSRDYLNRVGACVSGT*SWDNML
Trigger: CAACATATTGTCCCATGAGCAGGTGCCTGAGACACA...GGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GGGGGAAAGCGCTTATGTTATGATGCAACGCCAACAGCAGTCACTCTTTGGTTCGCACAGTGTTCACTTTaGTACTCAGGTGGGACTGGA +
Preference number: 4 (lower is better)
Translates to: GGKRLCYDATPTAVTLWFAQCSL*YSGGTG
Trigger: TCCAGTCCCACCTGAGTAGCAAAGTGAACACTGTGC...GAACCAAAGAGTGACTGCTGTTGGCGTTGCATCATAACATAAGCGCTTTCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR GCA 90 bp GCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTATGTGCTGCCTTATGTaGCCCGTGCCAGACTCCGAT +
Preference number: 4 (lower is better)
Translates to: AKVVHDEGKMQQGLSEPCMCCLM*PVPDSD
Trigger: ATCGGAGTCTGGCACGGGGCACATAAGGCAGCACAT...ACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443427.5
CDS-3UTR CCA 90 bp AAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGACCAGATGCTTTGGTGTaGAGGGTCATGGTCATGGTC +
Preference number: 4 (lower is better)
Translates to: KWCMMRVKCSRDYLNRVGPDALV*RVMVMV
Trigger: GACCATGACCATGACCCTCCACACCAAAGCATCTGG...TCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp GACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATGCACCGTGTAGCCGCTaGGCTCGTTCTCCAGGTAGT +
Preference number: 4 (lower is better)
Translates to: DRIWLKWCMMRVKCSRDYAPCSR*ARSPGS
Trigger: ACTACCTGGAGAACGAGCCCAGCGGCTACACGGTGC...ATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TTTCCAAACAAGACATACCAAGAGAAGCCCGAGCAGCTCACCTGGGTCATTGGCGCACTGGTTGGTGGCTaGACACATATAGTCGTTATG +
Preference number: 4 (lower is better)
Translates to: FPNKTYQEKPEQLTWVIGALVGG*THIVVM
Trigger: CATAACGACTATATGTGTCCAGCCACCAACCAGTGC...GCCAATGACCCAGGTGAGCTGCTCGGGCTTCTCTTGGTATGTCTTGTTTGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp GTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGCACTGGTTGGTGGCTaGACACATATAGTCGTTATG +
Preference number: 4 (lower is better)
Translates to: VHDEGKMQQGLSEPCGSQALVGG*THIVVM
Trigger: CATAACGACTATATGTGTCCAGCCACCAACCAGTGC...CTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp GATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGCTTTATCAATGGTGCACTaGTTGGTGGCTGGACACATA +
Preference number: 4 (lower is better)
Translates to: DEGKMQQGLSEPCGSQGALSMVH*LVAGHI
Trigger: TATGTGTCCAGCCACCAACCAGTGCACCATTGATAA...AGCTCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp GATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGCTTCCTGTTTTTATCAATaGTGCACTGGTTGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: DEGKMQQGLSEPCGSQGASCFYQ*CTGWWL
Trigger: CAGCCACCAACCAGTGCACCATTGATAAAAACAGGA...AGCTCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp AGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGAGATCATGAGCGGGCTTaGCCAAAGGTTGGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: RRQNLAKVVHDEGKMQQGDHERA*PKVGSS
Trigger: AGAGCTGCCAACCTTTGGCCAAGCCCGCTCATGATC...TCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TGCACAGCTCTAAACACACACACTGACGATGGGTTTGGAACATGGCAGCATTTAGATCATGAGCGGGCTTaGCCAAAGGTTGGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: CTALNTHTDDGFGTWQHLDHERA*PKVGSS
Trigger: AGAGCTGCCAACCTTTGGCCAAGCCCGCTCATGATC...TAAATGCTGCCATGTTCCAAACCCATCGTCAGTGTGTGTGTTTAGAGCTGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp AACTCTTGGGGACTTTTGAAGATAATGACGAGCATCCGCAGATGCTCTAAGGTTAAGGCACTGACCATCTaGTCGGCCGTCAGGGACAAG +
Preference number: 4 (lower is better)
Translates to: NSWGLLKIMTSIRRCSKVKALTI*SAVRDK
Trigger: CTTGTCCCTGACGGCCGACCAGATGGTCAGTGCCTT...AACCTTAGAGCATCTGCGGATGCTCGTCATTATCTTCAAAAGTCCCCAAGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CCA 90 bp GGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATCCCTGTCTGCCAGGTTaGTCAGTAAGCCCATCATCG +
Preference number: 4 (lower is better)
Translates to: GDRIWLKWCMMRVKCSRDPCLPG*SVSPSS
Trigger: CGATGATGGGCTTACTGACCAACCTGGCAGACAGGG...ATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp AAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGCAAATCCACAAAGCCTaGCACCCTCTTCGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: KVVHDEGKMQQGLSEPCGQIHKA*HPLRPV
Trigger: AACTGGGCGAAGAGGGTGCCAGGCTTTGTGGATTTG...CCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGACTTCAGGGTGCTaGACAGAAATGTGTACACTC +
Preference number: 4 (lower is better)
Translates to: CMMRVKCSRDYLNRVGARETSGC*TEMCTL
Trigger: GAGTGTACACATTTCTGTCCAGCACCCTGAAGTCTC...CCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp GTGATCTTGTCCAGGACTCGGTGGATATGGTCCTTCTCTTCCAGAGACTTCAGGGAGACTTCAGGGTGCTaGACAGAAATGTGTACACTC +
Preference number: 4 (lower is better)
Translates to: VILSRTRWIWSFSSRDFRETSGC*TEMCTL
Trigger: GAGTGTACACATTTCTGTCCAGCACCCTGAAGTCTC...CCTGAAGTCTCTGGAAGAGAAGGACCATATCCACCGAGTCCTGGACAAGATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR CCA 90 bp AGTGTCTGTGATCTTGTCCAGGACTCGGTGGATATGGTCCTTCTCTTCCAGAGAGCCTTGGCCATCAGGTaGATCAAAGTGTCTGTGATC +
Preference number: 4 (lower is better)
Translates to: SVCDLVQDSVDMVLLFQRALAIR*IKVSVI
Trigger: GATCACAGACACTTTGATCCACCTGATGGCCAAGGC...TCTCTGGAAGAGAAGGACCATATCCACCGAGTCCTGGACAAGATCACAGACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR CCA 90 bp GACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATGGAGCTCTCAGACCGTaGCAGGGAAACCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: DRIWLKWCMMRVKCSRDYGALRP*QGNPLP
Trigger: AGGCAGAGGGTTTCCCTGCCACGGTCTGAGAGCTCC...ATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCCATCTAGAAAGCCATTaGTGTTGGATGCATGCCGGA +
Preference number: 4 (lower is better)
Translates to: WCMMRVKCSRDYLNRVGAHLESH*CWMHAG
Trigger: TCCGGCATGCATCCAACACCAATGGCTTTCTAGATG...GGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCTCTACTCTCCAGGCCTaGGTCTCTACAAGTAGCTTA +
Preference number: 4 (lower is better)
Translates to: WCMMRVKCSRDYLNRVGASTLQA*VSTSSL
Trigger: TAAGCTACTTGTAGAGACCCAGGCCTGGAGAGTAGA...GGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp ATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGAGCCCTCAAAAGGCATaGGCTATGGCTTGGTTAAAC +
Preference number: 4 (lower is better)
Translates to: MMRVKCSRDYLNRVGARESPQKA*AMAWLN
Trigger: GTTTAACCAAGCCATAGCCCATGCCTTTTGAGGGCT...CTCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp ATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGGCTCGAGCATCCCGCTaGATTCTTTTTCAAAGTGCA +
Preference number: 4 (lower is better)
Translates to: MMRVKCSRDYLNRVGAREARASR*ILFQSA
Trigger: TGCACTTTGAAAAAGAATCCAGCGGGATGCTCGAGC...CTCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TCCTTCAACAGACTCCAACATAGGAGTCCACATTCTGTAAATGGTGACATTTTTTGGTCTCCTGTGTCCTaGACCGGCCGCGCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: SFNRLQHRSPHSVNGDIFWSPVS*TGRAPS
Trigger: GGAAGGAGCGCGGCCGGTCCAGGACACAGGAGACCA...AAAAATGTCACCATTTACAGAATGTGGACTCCTATGTTGGAGTCTGTTGAAGGA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CCA 90 bp TGCAAGGAATGCGATGAAGTAGAGCCCGCAGTGGCCAAGTGGCTTTGGTCCGTCTCTACACATTTTCCCTaGTTCCACCTTTCATCATTC +
Preference number: 4 (lower is better)
Translates to: CKECDEVEPAVAKWLWSVSTHFP*FHLSSF
Trigger: GAATGATGAAAGGTGGAACCAGGGAAAATGTGTAGA...GACGGACCAAAGCCACTTGGCCACTGCGGGCTCTACTTCATCGCATTCCTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456483.3
3UTR CAA 72 bp CAAACGTCATCCAACACCTTCACAGACAGGTTGTGGTaGAACATTCTTGGGCTTCGTTACCGTCGGTACCTC +
Preference number: 4 (lower is better)
Translates to: QTSSNTFTDRLW*NILGLRYRRYL
Trigger: GAGGTACCGACGGTAACGAAGCCCAAGAATGTTCAACCACAACCTGTCTGTGAAGGTGTTGGATGACGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR CAA 72 bp GAATGGCAAACGTCATCCAACACCTTCACAGACAGGTaGTGGTTGAACATTCTTGGGCTTCGTTACCGTCGG +
Preference number: 4 (lower is better)
Translates to: EWQTSSNTFTDR*WLNILGLRYRR
Trigger: CCGACGGTAACGAAGCCCAAGAATGTTCAACCACAACCTGTCTGTGAAGGTGTTGGATGACGTTTGCCATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR TCA 90 bp AGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGGCCCAGTTGATCATGTaGACCAGCTCCCTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: RIWLKWCMMRVKCSRDYLAQLIM*TSSLSA
Trigger: GGCAGACAGGGAGCTGGTTCACATGATCAACTGGGC...CAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp CTTTCCCTCTTGTTCTCTAGTAGCCACAACAATCCTGCACAAGTACTGTTCAGCATTAACTGGAACCCATaGCCGGAAAGCCAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LSLLFSSSHNNPAQVLFSINWNP*PESQRQ
Trigger: CTGCCTCTGGCTTTCCGGTCATGGGTTCCAGTTAAT...GCTGAACAGTACTTGTGCAGGATTGTTGTGGCTACTAGAGAACAAGAGGGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp GGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATATTAACTGGAACCCATaGCCGGAAAGCCAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GDRIWLKWCMMRVKCSRDINWNP*PESQRQ
Trigger: CTGCCTCTGGCTTTCCGGTCATGGGTTCCAGTTAAT...ATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp GCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTATTAACTGGAACCCATaGCCGGAAAGCCAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: AKVVHDEGKMQQGLSEPCINWNP*PESQRQ
Trigger: CTGCCTCTGGCTTTCCGGTCATGGGTTCCAGTTAAT...ACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp GACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATAGGGCATACGTAATCTaGCCAGGCCCCAGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: DRIWLKWCMMRVKCSRDYRAYVI*PGPSQP
Trigger: AGGCTGACTGGGGCCTGGTCAGATTACGTATGCCCT...ATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp GTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGTCTAAACACACACACTaGCGATGGGTTTGGAACATG +
Preference number: 4 (lower is better)
Translates to: VHDEGKMQQGLSEPCGSQSKHTH*RWVWNM
Trigger: CATGTTCCAAACCCATCGTCAGTGTGTGTGTTTAGA...CTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp AAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGCCAATGACCTCTCTGTaGATGCAAAGGGGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: KVVHDEGKMQQGLSEPCGPMTSL*MQRGLC
Trigger: ACACAGACCCCTTTGCATTCACAGAGAGGTCATTGG...CCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp GTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCATGGATCCACCTCTTaGCCACTTTCTCAACTATTC +
Preference number: 4 (lower is better)
Translates to: VVHDEGKMQQGLSEPCGSHGSTS*PLSQLF
Trigger: GAATAGTTGAGAAAGTGGTCAAGAGGTGGATCCATG...GCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS-3UTR TCA 90 bp CATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGGATGTGTTTCCAGCTaGAATGTAATACTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: HDEGKMQQGLSEPCGSQGGCVSS*NVILLH
Trigger: GTGGAGGAGTATTACATTTCAGCTGGAAACACATCC...TCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS-3UTR TCA 90 bp AAAATGTCGAAGGCATCGTTTCTTAGGGCAGCAAGTGCTTCCTCATGCCTCCTAATTTTGGGACAGAGATaGAGCAACTCCTGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: KMSKASFLRAASASSCLLILGQR*SNSWAA
Trigger: AGCTGCCCAGGAGTTGCTTCATCTCTGTCCCAAAAT...TAGGAGGCATGAGGAAGCACTTGCTGCCCTAAGAAACGATGCCTTCGACATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR TCA 90 bp GGGGGAAAGCGCTTATGTTATGATGCAACGCCAACAGCAGTCACTCTTTGGTTCCTGCTGAAGGGCCATTaGTGGGTAGAAGCCTTTAAA +
Preference number: 4 (lower is better)
Translates to: GGKRLCYDATPTAVTLWFLLKGH*WVEAFK
Trigger: TTTAAAGGCTTCTACCCATCAATGGCCCTTCAGCAG...GAACCAAAGAGTGACTGCTGTTGGCGTTGCATCATAACATAAGCGCTTTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR TCA 90 bp GGGGGAAAGCGCTTATGTTATGATGCAACGCCAACAGCAGTCACTCTTTGGTTCTTCTCTGTTGCTATTTaGGGTAGGCCTTCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: GGKRLCYDATPTAVTLWFFSVAI*GRPSWC
Trigger: ACACCAGGAAGGCCTACCTCAAATAGCAACAGAGAA...GAACCAAAGAGTGACTGCTGTTGGCGTTGCATCATAACATAAGCGCTTTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR GCA 90 bp TGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGATAGTCATTGCACACTaGACAGTAGCGAGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: CMMRVKCSRDYLNRVGARIVIAH*TVASLL
Trigger: AAGGAGACTCGCTACTGTGCAGTGTGCAATGACTAT...CCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TTTCCAAACAAGACATACCAAGAGAAGCCCGAGCAGCTCACCTGGGTCATTGGCTGTTTTTATCAATGGTaGACTGGTTGGTGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: FPNKTYQEKPEQLTWVIGCFYQW*TGWWLD
Trigger: GTCCAGCCACCAACCAGTGCACCATTGATAAAAACA...GCCAATGACCCAGGTGAGCTGCTCGGGCTTCTCTTGGTATGTCTTGTTTGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TTTCATAAAAGGATGCATTGCCATAGGAATACAAGAGGGTGCTATAATAAACCCCGCTGGTGCTGCTGCTaGAGGGTCAGGCCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: FHKRMHCHRNTRGCYNKPRWCCC*RVRPAL
Trigger: CAAGGCAGGCCTGACCCTGCAGCAGCAGCACCAGCG...GGGTTTATTATAGCACCCTCTTGTATTCCTATGGCAATGCATCCTTTTATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GTCGAAGATCTCCACCATGCCCTCTACACATTTTCCCTGGTTCCACCTTTCATCCCTTTGTTACTCATGTaGCTGATGTGGGAGAGGATG +
Preference number: 4 (lower is better)
Translates to: VEDLHHALYTFSLVPPFIPLLLM*LMWERM
Trigger: CATCCTCTCCCACATCAGGCACATGAGTAACAAAGG...GATGAAAGGTGGAACCAGGGAAAATGTGTAGAGGGCATGGTGGAGATCTTCGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR GCA 90 bp GATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGCTTTCATGCTGTACAGATaGTCCATGCCTTTGTTACTC +
Preference number: 4 (lower is better)
Translates to: DEGKMQQGLSEPCGSQGAFMLYR*SMPLLL
Trigger: GAGTAACAAAGGCATGGAGCATCTGTACAGCATGAA...AGCTCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGGCCATTGGTGTTGGATaGATGCCGGAGTGTATGCAG +
Preference number: 4 (lower is better)
Translates to: LAKVVHDEGKMQQGLSEPAIGVG*MPECMQ
Trigger: CTGCATACACTCCGGCATGCATCCAACACCAATGGC...CGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp AGTACTGTTCAGCTCCATGCCCCAGGGCTAAATGCAACACCAGGGCCCCTGCTCAATCACCAGATACTCTaGTACAGTCATATAAAAGCT +
Preference number: 4 (lower is better)
Translates to: STVQLHAPGLNATPGPLLNHQIL*YSHIKA
Trigger: AGCTTTTATATGACTGTAGCAGAGTATCTGGTGATT...GAGCAGGGGCCCTGGTGTTGCATTTAGCCCTGGGGCATGGAGCTGAACAGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp AAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGCAACACCAGGGCCCCTaGTCCTTTCAACTACCATTT +
Preference number: 4 (lower is better)
Translates to: KVVHDEGKMQQGLSEPCGQHQGP*SFQLPF
Trigger: AAATGGTAGTTGAAAGGAGCAGGGGCCCTGGTGTTG...CCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp AATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAATGCCCCAGGGCTAAATaGAACACCAGGGCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: NLAKVVHDEGKMQQGLSECPRAK*NTRAPA
Trigger: AGCAGGGGCCCTGGTGTTGCATTTAGCCCTGGGGCA...TTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GCAGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGAGAGATTTCCAAAGTTaGTGGAGACCCCTGGGCGAA +
Preference number: 4 (lower is better)
Translates to: AGDRIWLKWCMMRVKCSRRDFQS*WRPLGE
Trigger: TTCGCCCAGGGGTCTCCAGCAACTTTGGAAATCTCT...CCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGCTCAGCCAGAAAATATCTaGTGTCCATTAGTGGCACTT +
Preference number: 4 (lower is better)
Translates to: DEGKMQQGLSEPCGSQGAQPENI*CPLVAL
Trigger: AAGTGCCACTAATGGACAGCAGATATTTTCTGGCTG...AGCTCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp CCCTGTGTAAGGCACACACACGCCGGGAAGATCCAAGTACAGTGCCCACTGGAAAGTGCAAAATTGAAGTaGCATAATAGAGGCAGCAAT +
Preference number: 4 (lower is better)
Translates to: PCVRHTHAGKIQVQCPLESAKLK*HNRGSN
Trigger: ATTGCTGCCTCTATTATGGCACTTCAATTTTGCACT...TTCCAGTGGGCACTGTACTTGGATCTTCCCGGCGTGTGTGTGCCTTACACAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp ATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGAAAATTGTTTACAGGTaGTCGAGCATCCCGCTGGAT +
Preference number: 4 (lower is better)
Translates to: MMRVKCSRDYLNRVGAREKIVYR*SSIPLD
Trigger: ATCCAGCGGGATGCTCGAGCACCTGTAAACAATTTT...CTCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCAAAATTGTTTACAGGTaGTCGAGCATCCCGCTGGAT +
Preference number: 4 (lower is better)
Translates to: VVHDEGKMQQGLSEPCGSKIVYR*SSIPLD
Trigger: ATCCAGCGGGATGCTCGAGCACCTGTAAACAATTTT...GCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp ATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACACGCAGCTGGGCTACTaGACAGCGCTGGATGAATGG +
Preference number: 4 (lower is better)
Translates to: IWLKWCMMRVKCSRDYLNTQLGY*TALDEW
Trigger: CCATTCATCCAGCGCTGTGCAGTAGCCCAGCTGCGT...GTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS-3UTR GCA 90 bp GGGCAGCCAGCTGCACGGACAGTCACTGAATATTGTGTGTTCTCTCTGTCCCCAAATATTGCGTCTATCTaGTCTCCGCATTGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: GQPAARTVTEYCVFSLSPNIASI*SPHCFR
Trigger: TCTGAAACAATGCGGAGAGCAGATAGACGCAATATT...TGGGGACAGAGAGAACACACAATATTCAGTGACTGTCCGTGCAGCTGGCTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR GCA 90 bp AGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGACGGCTTTCTCTAATGTaGTGCCTTATGTGCCCCGTG +
Preference number: 4 (lower is better)
Translates to: RRQNLAKVVHDEGKMQQGRLSLM*CLMCPV
Trigger: CACGGGGCACATAAGGCAGCACATTAGAGAAAGCCG...TCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443427.5
CDS-3UTR CCA 90 bp CTGCTACAGTCATATAAAAGCTTTAAGGTGTACCACTTTCATAAAAGGATGCATGGCACCTGCTGGCCGTaGGGCTGCAGGAAAGGCGAC +
Preference number: 4 (lower is better)
Translates to: LLQSYKSFKVYHFHKRMHGTCWP*GCRKGD
Trigger: GTCGCCTTTCCTGCAGCCCCACGGCCAGCAGGTGCC...ATGCATCCTTTTATGAAAGTGGTACACCTTAAAGCTTTTATATGACTGTAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp GGGGGAAAGCGCTTATGTTATGATGCAACGCCAACAGCAGTCACTCTTTGGTTCGCACTGGTTGGTGGCTaGACACATATAGTCGTTATG +
Preference number: 4 (lower is better)
Translates to: GGKRLCYDATPTAVTLWFALVGG*THIVVM
Trigger: CATAACGACTATATGTGTCCAGCCACCAACCAGTGC...GAACCAAAGAGTGACTGCTGTTGGCGTTGCATCATAACATAAGCGCTTTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CCA 90 bp CATGTCGAAGATCTCCACCATGCCCTCTACACATTTTCCCTGGTTCCACCTTTCGCACTGGTTGGTGGCTaGACACATATAGTCGTTATG +
Preference number: 4 (lower is better)
Translates to: HVEDLHHALYTFSLVPPFALVGG*THIVVM
Trigger: CATAACGACTATATGTGTCCAGCCACCAACCAGTGC...GAAAGGTGGAACCAGGGAAAATGTGTAGAGGGCATGGTGGAGATCTTCGACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR CCA 90 bp GTCTGTGATCTTGTCCAGGACTCGGTGGATATGGTCCTTCTCTTCCAGAGACTTCAATGGTGCACTGGTTaGTGGCTGGACACATATAGT +
Preference number: 4 (lower is better)
Translates to: VCDLVQDSVDMVLLFQRLQWCTG*WLDTYS
Trigger: ACTATATGTGTCCAGCCACCAACCAGTGCACCATTG...AAGTCTCTGGAAGAGAAGGACCATATCCACCGAGTCCTGGACAAGATCACAGAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR CCA 90 bp GTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCTTATCAATGGTGCACTaGTTGGTGGCTGGACACATA +
Preference number: 4 (lower is better)
Translates to: VVHDEGKMQQGLSEPCGSLSMVH*LVAGHI
Trigger: TATGTGTCCAGCCACCAACCAGTGCACCATTGATAA...GCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TCCTTCAACAGACTCCAACATAGGAGTCCACATTCTGTAAATGGTGACATTTTTCGGAGCCGGCAGGCCTaGCAGCTCTTCCTCCTGTTT +
Preference number: 4 (lower is better)
Translates to: SFNRLQHRSPHSVNGDIFRSRQA*QLFLLF
Trigger: AAACAGGAGGAAGAGCTGCCAGGCCTGCCGGCTCCG...AAAAATGTCACCATTTACAGAATGTGGACTCCTATGTTGGAGTCTGTTGAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CCA 90 bp CACTCTTTGGTTCCCAAATATTGCGTCTATCTGCTCTCCGCATTGTTTCAGACAGATCATGAGCGGGCTTaGCCAAAGGTTGGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: HSLVPKYCVYLLSALFQTDHERA*PKVGSS
Trigger: AGAGCTGCCAACCTTTGGCCAAGCCCGCTCATGATC...TGTCTGAAACAATGCGGAGAGCAGATAGACGCAATATTTGGGAACCAAAGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CCA 90 bp AGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAAGGCACTGACCATCTaGTCGGCCGTCAGGGACAAG +
Preference number: 4 (lower is better)
Translates to: RIWLKWCMMRVKCSRDYLKALTI*SAVRDK
Trigger: CTTGTCCCTGACGGCCGACCAGATGGTCAGTGCCTT...CAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp CAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTAAGGCACTGACCATCTaGTCGGCCGTCAGGGACAAG +
Preference number: 4 (lower is better)
Translates to: QNLAKVVHDEGKMQQGLSKALTI*SAVRDK
Trigger: CTTGTCCCTGACGGCCGACCAGATGGTCAGTGCCTT...AGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp CTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGCAAATCCACAAAGCCTaGCACCCTCTTCGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: LKWCMMRVKCSRDYLNRVQIHKA*HPLRPV
Trigger: AACTGGGCGAAGAGGGTGCCAGGCTTTGTGGATTTG...CACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGTCTACACATTTTCCCTaGTTCCTGTCCAAGAGCAAG +
Preference number: 4 (lower is better)
Translates to: CMMRVKCSRDYLNRVGARSTHFP*FLSKSK
Trigger: CTTGCTCTTGGACAGGAACCAGGGAAAATGTGTAGA...CCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp CCATTGGTGTTGGATGCATGCCGGAGTGTATGCAGGAGACAGAATTTGGCTAAAAGGACTCGGTGGATATaGTCCTTCTCTTCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: PLVLDACRSVCRRQNLAKRTRWI*SFSSRD
Trigger: GTCTCTGGAAGAGAAGGACCATATCCACCGAGTCCT...TTTAGCCAAATTCTGTCTCCTGCATACACTCCGGCATGCATCCAACACCAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TTTCATAAAAGGATGCATTGCCATAGGAATACAAGAGGGTGCTATAATAAACCCGGCGCATGTAGGCGGTaGGCGTCCAGCATCTCCAGC +
Preference number: 4 (lower is better)
Translates to: FHKRMHCHRNTRGCYNKPGACRR*ASSISS
Trigger: GCTGGAGATGCTGGACGCCCACCGCCTACATGCGCC...GGGTTTATTATAGCACCCTCTTGTATTCCTATGGCAATGCATCCTTTTATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp ATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACGTGGCCAAGTGGCTTTaGTCCGTCTCCTCCACGGAT +
Preference number: 4 (lower is better)
Translates to: IWLKWCMMRVKCSRDYLNVAKWL*SVSSTD
Trigger: ATCCGTGGAGGAGACGGACCAAAGCCACTTGGCCAC...GTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp AGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGACACCCTGAGCAAGTCTaGCTGTGCCTCAGAACTGTA +
Preference number: 4 (lower is better)
Translates to: RRQNLAKVVHDEGKMQQGHPEQV*LCLRTV
Trigger: TACAGTTCTGAGGCACAGCCAGACTTGCTCAGGGTG...TCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TTTAAAAAGTGCTTATCAGAGGCAAAATGTCTACTCTCCAGGCCTGGGTCTCTACGTGCCCCAGGGTGCTaGGCCAATTGTAGGAACACA +
Preference number: 4 (lower is better)
Translates to: FKKCLSEAKCLLSRPGSLRAPGC*ANCRNT
Trigger: TGTGTTCCTACAATTGGCCCAGCACCCTGGGGCACG...TAGAGACCCAGGCCTGGAGAGTAGACATTTTGCCTCTGATAAGCACTTTTTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp ATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGCCCCAGGGTGCTaGGCCAATTGTAGGAACACA +
Preference number: 4 (lower is better)
Translates to: IWLKWCMMRVKCSRDYLNRAPGC*ANCRNT
Trigger: TGTGTTCCTACAATTGGCCCAGCACCCTGGGGCACG...GTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp GCAAGGGGGAAAGAGAGCTGTTACAAAGATTTAGCCTTGGAATCCCTTTGGCTGGTTGCTGGAGACCCCTaGGCGAACATTTCAATCATC +
Preference number: 4 (lower is better)
Translates to: ARGKESCYKDLALESLWLVAGDP*ANISII
Trigger: GATGATTGAAATGTTCGCCCAGGGGTCTCCAGCAAC...CAGCCAAAGGGATTCCAAGGCTAAATCTTTGTAACAGCTCTCTTTCCCCCTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp ATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGCTCTTCAGGGGATTAACTTaGGAATGGTGCAGTGTAATC +
Preference number: 4 (lower is better)
Translates to: MRVKCSRDYLNRVGARELFRGLT*EWCSVI
Trigger: GATTACACTGCACCATTCCCAAGTTAATCCCCTGAA...GAGCTCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp CCCTGTGTAAGGCACACACACGCCGGGAAGATCCAAGTACAGTGCCCACTGGAAACGCTACTGAAAAGATaGATATTTGGGACCAAAGTT +
Preference number: 4 (lower is better)
Translates to: PCVRHTHAGKIQVQCPLETLLKR*IFGTKV
Trigger: AACTTTGGTCCCAAATATCCATCTTTTCAGTAGCGT...TTCCAGTGGGCACTGTACTTGGATCTTCCCGGCGTGTGTGTGCCTTACACAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTCTTTGCCCCTACCCTTaGAGGCTGGAAAGTACCCTA +
Preference number: 4 (lower is better)
Translates to: WLKWCMMRVKCSRDYLNRLCPYP*RLESTL
Trigger: TAGGGTACTTTCCAGCCTCCAAGGGTAGGGGCAAAG...ACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS-3UTR CCA 90 bp AGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTAGCTACTGCACAGCGCTaGATGAATGGCAGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: RQNLAKVVHDEGKMQQGLATAQR*MNGSGE
Trigger: CTCCCCACTGCCATTCATCCAGCGCTGTGCAGTAGC...TAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS-3UTR CCA 90 bp GCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGATGTGTTTGTGCGTaGAATGGCAGGGATTCGGGA +
Preference number: 4 (lower is better)
Translates to: AKVVHDEGKMQQGLSEPCGCVCA*NGRDSG
Trigger: TCCCGAATCCCTGCCATTCCACGCACAAACACATCC...ACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS-3UTR CCA 90 bp CGAGAAGGGGGAAAGCGCTTATGTTATGATGCAACGCCAACAGCAGTCACTCTTCAGTCCAGGCTGTCGTaGTGTTCCTTTACATTGAGA +
Preference number: 4 (lower is better)
Translates to: REGGKRLCYDATPTAVTLQSRLS*CSFTLR
Trigger: TCTCAATGTAAAGGAACACCACGACAGCCTGGACTG...AAGAGTGACTGCTGTTGGCGTTGCATCATAACATAAGCGCTTTCCCCCTTCTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR CAA 72 bp AGCAAGCAAATGAATGGCCACTCATCTAGAAAGCCATaGGTGTTGGATGCATGCCGGAGTGTATGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: SKQMNGHSSRKP*VLDACRSVCRR
Trigger: TCTCCTGCATACACTCCGGCATGCATCCAACACCAATGGCTTTCTAGATGAGTGGCCATTCATTTGCTTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR CAA 72 bp GTCTGTGTCTCAGGCACCTGCTCATGGGACAATATGTaGTTTCTAGGGTGCACAGCTCTAAACACACACACT +
Preference number: 4 (lower is better)
Translates to: VCVSGTCSWDNM*FLGCTALNTHT
Trigger: AGTGTGTGTGTTTAGAGCTGTGCACCCTAGAAACAACATATTGTCCCATGAGCAGGTGCCTGAGACACAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR CAA 72 bp CACTACTCCCTCCCTGCCATTCTCCTTATCCCGCAATaGTCTAGGTATTTTGGGACAGAGATGAAGCAACTC +
Preference number: 4 (lower is better)
Translates to: HYSLPAILLIPQ*SRYFGTEMKQL
Trigger: GAGTTGCTTCATCTCTGTCCCAAAATACCTAGACAATTGCGGGATAAGGAGAATGGCAGGGAGGGAGTAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR CAA 72 bp CAACGCCAACAGCAGTCACTCTTTGGTTCCCAAATATaGCGTCTATCTGCTCTCCGCATTGTTTCAGACAGC +
Preference number: 4 (lower is better)
Translates to: QRQQQSLFGSQI*RLSALRIVSDS
Trigger: GCTGTCTGAAACAATGCGGAGAGCAGATAGACGCAATATTTGGGAACCAAAGAGTGACTGCTGTTGGCGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR TCA 90 bp AAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGCTGGCGTCGATTATCTaGATTTGGCCTGTAGAATGC +
Preference number: 4 (lower is better)
Translates to: KVVHDEGKMQQGLSEPCGLASII*IWPVEC
Trigger: GCATTCTACAGGCCAAATTCAGATAATCGACGCCAG...CCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp AAATACAAAGAGATTTCCAAAGTTGCTGGAGACCCCTGGGCGAACATTTCAATCCATGCGGAACCGAGATaGTGTAGCCAGCAGCATGTC +
Preference number: 4 (lower is better)
Translates to: KYKEISKVAGDPWANISIHAEPR*CSQQHV
Trigger: GACATGCTGCTGGCTACATCATCTCGGTTCCGCATG...GATTGAAATGTTCGCCCAGGGGTCTCCAGCAACTTTGGAAATCTCTTTGTATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp AGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGAGGATCAAAGTGTCTGTaGTCTTGTCCAGGACTCGGT +
Preference number: 4 (lower is better)
Translates to: RRQNLAKVVHDEGKMQQGGSKCL*SCPGLG
Trigger: ACCGAGTCCTGGACAAGATCACAGACACTTTGATCC...TCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp TGCACAGCTCTAAACACACACACTGACGATGGGTTTGGAACATGGCAGCATTTAGGATCAAAGTGTCTGTaGTCTTGTCCAGGACTCGGT +
Preference number: 4 (lower is better)
Translates to: CTALNTHTDDGFGTWQHLGSKCL*SCPGLG
Trigger: ACCGAGTCCTGGACAAGATCACAGACACTTTGATCC...TAAATGCTGCCATGTTCCAAACCCATCGTCAGTGTGTGTGTTTAGAGCTGTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp ATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACTTGCAAGGAATGCGATaGAGTAGAGCCCGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: IWLKWCMMRVKCSRDYLNLQGMR*SRARSG
Trigger: GCCACTGCGGGCTCTACTTCATCGCATTCCTTGCAA...GTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp GCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTATGCACAGAGTTATCTaGGCCCCAACCCATAGACTG +
Preference number: 4 (lower is better)
Translates to: AKVVHDEGKMQQGLSEPCMHRVI*APTHRL
Trigger: CAGTCTATGGGTTGGGGCTCAGATAACTCTGTGCAT...ACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp TGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTCATGCATCACCACAGTaGACAGTTCACCCCTGTGTA +
Preference number: 4 (lower is better)
Translates to: WLKWCMMRVKCSRDYLNRHASPQ*TVHPCV
Trigger: TACACAGGGGTGAACTGTTCACTGTGGTGATGCATG...ACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp TTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGCATGCATCACCACAGTaGACAGTTCACCCCTGTGTA +
Preference number: 4 (lower is better)
Translates to: LAKVVHDEGKMQQGLSEPHASPQ*TVHPCV
Trigger: TACACAGGGGTGAACTGTTCACTGTGGTGATGCATG...CGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp GGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATCATGCATCACCACAGTaGACAGTTCACCCCTGTGTA +
Preference number: 4 (lower is better)
Translates to: GDRIWLKWCMMRVKCSRDHASPQ*TVHPCV
Trigger: TACACAGGGGTGAACTGTTCACTGTGGTGATGCATG...ATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp TGTACCACTTTCATAAAAGGATGCATTGCCATAGGAATACAAGAGGGTGCTATAAGGCCCCAGTCAGCCTaGGTAGTGACAGCAACGGTC +
Preference number: 4 (lower is better)
Translates to: CTTFIKGCIAIGIQEGAIRPQSA*VVTATV
Trigger: GACCGTTGCTGTCACTACTCAGGCTGACTGGGGCCT...TATAGCACCCTCTTGTATTCCTATGGCAATGCATCCTTTTATGAAAGTGGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp GTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGTTAAAAAGAACCCACTaGCCCATTAGCTACTGTCCA +
Preference number: 4 (lower is better)
Translates to: VHDEGKMQQGLSEPCGSQLKRTH*PISYCP
Trigger: TGGACAGTAGCTAATGGGTCAGTGGGTTCTTTTTAA...CTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp AAATACAAAGAGATTTCCAAAGTTGCTGGAGACCCCTGGGCGAACATTTCAATCAGAAGTGGACTCTACTaGACCCTGGTGCACACCCAG +
Preference number: 4 (lower is better)
Translates to: KYKEISKVAGDPWANISIRSGLY*TLVHTQ
Trigger: CTGGGTGTGCACCAGGGTTCAGTAGAGTCCACTTCT...GATTGAAATGTTCGCCCAGGGGTCTCCAGCAACTTTGGAAATCTCTTTGTATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp CCCTACTTTCCCTCTTGTTCTCTAGTAGCCACAACAATCCTGCACAAGTACTGTCCAATGACCTCTCTGTaGATGCAAAGGGGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: PYFPSCSLVATTILHKYCPMTSL*MQRGLC
Trigger: ACACAGACCCCTTTGCATTCACAGAGAGGTCATTGG...ACAGTACTTGTGCAGGATTGTTGTGGCTACTAGAGAACAAGAGGGAAAGTAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp TGCAGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGCCAATGACCTCTCTGTaGATGCAAAGGGGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: CRRQNLAKVVHDEGKMQQPMTSL*MQRGLC
Trigger: ACACAGACCCCTTTGCATTCACAGAGAGGTCATTGG...CTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp GATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGCTATTGTTTATCACCTGTaGGAGAACAGAAACTGGCAT +
Preference number: 4 (lower is better)
Translates to: DEGKMQQGLSEPCGSQGAIVYHL*ENRNWH
Trigger: ATGCCAGTTTCTGTTCTCTCACAGGTGATAAACAAT...AGCTCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp ATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGACAAGAGCTCTACACTaGAGAGTATGTAGTGCACAA +
Preference number: 4 (lower is better)
Translates to: MMRVKCSRDYLNRVGARETRALH*RVCSAQ
Trigger: TTGTGCACTACATACTCTTCAGTGTAGAGCTCTTGT...CTCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp TGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGTTACTGAGAGATTTATaGGTGGCTCTTGAGACCAGT +
Preference number: 4 (lower is better)
Translates to: CMMRVKCSRDYLNRVGARLLRDL*VALETS
Trigger: ACTGGTCTCAAGAGCCACTCATAAATCTCTCAGTAA...CCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS-3UTR TCA 90 bp GGGGGAAAGCGCTTATGTTATGATGCAACGCCAACAGCAGTCACTCTTTGGTTCAAAGCGCTTATGTTATaGTGCAACGCCAACAGCAGT +
Preference number: 4 (lower is better)
Translates to: GGKRLCYDATPTAVTLWFKALML*CNANSS
Trigger: ACTGCTGTTGGCGTTGCATCATAACATAAGCGCTTT...GAACCAAAGAGTGACTGCTGTTGGCGTTGCATCATAACATAAGCGCTTTCCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR GCA 90 bp CTGCTACAGTCATATAAAAGCTTTAAGGTGTACCACTTTCATAAAAGGATGCATCCCGACGGGAGCAAGTaGAGTCCCAGGACGAACGCC +
Preference number: 4 (lower is better)
Translates to: LLQSYKSFKVYHFHKRMHPDGSK*SPRTNA
Trigger: GGCGTTCGTCCTGGGACTGCACTTGCTCCCGTCGGG...ATGCATCCTTTTATGAAAGTGGTACACCTTAAAGCTTTTATATGACTGTAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000206249.8
CDS-3UTR GCA 90 bp AGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATGGCCAATCTTTCTCTaGCACCCTGGCGTCGATTAT +
Preference number: 4 (lower is better)
Translates to: RRQNLAKVVHDEGKMQQGWPIFL*HPGVDY
Trigger: ATAATCGACGCCAGGGTGGCAGAGAAAGATTGGCCA...TCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GCAGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGCTGAAGCATAGTCATTaGACACTGCACAGTAGCGAG +
Preference number: 4 (lower is better)
Translates to: AGDRIWLKWCMMRVKCSRLKHSH*TLHSSE
Trigger: CTCGCTACTGTGCAGTGTGCAATGACTATGCTTCAG...CCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GTCTGTGATCTTGTCCAGGACTCGGTGGATATGGTCCTTCTCTTCCAGAGACTTTGTTTTTATCAATGGTaGACTGGTTGGTGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: VCDLVQDSVDMVLLFQRLCFYQW*TGWWLD
Trigger: GTCCAGCCACCAACCAGTGCACCATTGATAAAAACA...AAGTCTCTGGAAGAGAAGGACCATATCCACCGAGTCCTGGACAAGATCACAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR GCA 90 bp AAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGACGAAGATCTCCACCATaGCCTCTACACATTTTCCCT +
Preference number: 4 (lower is better)
Translates to: KWCMMRVKCSRDYLNRVGRRSPP*PLHIFP
Trigger: AGGGAAAATGTGTAGAGGGCATGGTGGAGATCTTCG...TCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TGTACCACTTTCATAAAAGGATGCATTGCCATAGGAATACAAGAGGGTGCTATACTGCAGGGTCAGGCCTaGCTTGGCCATCAGGTGGAT +
Preference number: 4 (lower is better)
Translates to: CTTFIKGCIAIGIQEGAILQGQA*LGHQVD
Trigger: ATCCACCTGATGGCCAAGGCAGGCCTGACCCTGCAG...TATAGCACCCTCTTGTATTCCTATGGCAATGCATCCTTTTATGAAAGTGGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp AAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGACCTTTGTTACTCATGTaGCTGATGTGGGAGAGGATG +
Preference number: 4 (lower is better)
Translates to: KWCMMRVKCSRDYLNRVGPLLLM*LMWERM
Trigger: CATCCTCTCCCACATCAGGCACATGAGTAACAAAGG...TCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGTTCATGCTGTACAGATaGTCCATGCCTTTGTTACTC +
Preference number: 4 (lower is better)
Translates to: VHDEGKMQQGLSEPCGSQFMLYR*SMPLLL
Trigger: GAGTAACAAAGGCATGGAGCATCTGTACAGCATGAA...CTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGGGGCACCACGTTCTTaGACTTCATGCTGTACAGAT +
Preference number: 4 (lower is better)
Translates to: WLKWCMMRVKCSRDYLNRGAPRS*TSCCTD
Trigger: ATCTGTACAGCATGAAGTGCAAGAACGTGGTGCCCC...ACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp AGTGTCTGTGATCTTGTCCAGGACTCGGTGGATATGGTCCTTCTCTTCCAGAGATACTTTTGCAAGGAATaGGATGAAGTAGAGCCCGCA +
Preference number: 4 (lower is better)
Translates to: SVCDLVQDSVDMVLLFQRYFCKE*DEVEPA
Trigger: TGCGGGCTCTACTTCATCGCATTCCTTGCAAAAGTA...TCTCTGGAAGAGAAGGACCATATCCACCGAGTCCTGGACAAGATCACAGACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR GCA 90 bp AGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGGGCAGGGAAACCCTCTaGCTCCCCCGTGATGTAATA +
Preference number: 4 (lower is better)
Translates to: RIWLKWCMMRVKCSRDYLGRETL*LPRDVI
Trigger: TATTACATCACGGGGGAGGCAGAGGGTTTCCCTGCC...CAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp ATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGCTCATTTGGCTAAAGTGGTaGATGATGAGGGTAAAATGC +
Preference number: 4 (lower is better)
Translates to: MRVKCSRDYLNRVGARELIWLKW*MMRVKC
Trigger: GCATTTTACCCTCATCATGCACCACTTTAGCCAAAT...GAGCTCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TGCAGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGCATGCCGGAGTGTATaGAGGAGACAGAATTTGGCT +
Preference number: 4 (lower is better)
Translates to: CRRQNLAKVVHDEGKMQQACRSV*RRQNLA
Trigger: AGCCAAATTCTGTCTCCTGCATACACTCCGGCATGC...CTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTTTGGTGTTGGATGCATaGCGGAGTGTATGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: AKVVHDEGKMQQGLSEPCLVLDA*RSVCRR
Trigger: TCTCCTGCATACACTCCGGCATGCATCCAACACCAA...ACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTTCTGCCTTCCCTGTGTaGCCCTTGTATTCCTATAGG +
Preference number: 4 (lower is better)
Translates to: WLKWCMMRVKCSRDYLNRSAFPV*PLYSYR
Trigger: CCTATAGGAATACAAGGGGCACACAGGGAAGGCAGA...ACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GTTTCTGCCCTACTTTCCCTCTTGTTCTCTAGTAGCCACAACAATCCTGCACAATACTGTTCAGCTCCATaGCCCAGGGCTAAATGCAAC +
Preference number: 4 (lower is better)
Translates to: VSALLSLLFSSSHNNPAQYCSAP*PRAKCN
Trigger: GTTGCATTTAGCCCTGGGGCATGGAGCTGAACAGTA...TTGTGCAGGATTGTTGTGGCTACTAGAGAACAAGAGGGAAAGTAGGGCAGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp AGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTAACCCCCAAAGGGCAATaGGGGGTCTGCAAGGAATGT +
Preference number: 4 (lower is better)
Translates to: RQNLAKVVHDEGKMQQGLTPKGQ*GVCKEC
Trigger: ACATTCCTTGCAGACCCCGCATTGCCCTTTGGGGGT...TAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TTTAAAAAGTGCTTATCAGAGGCAAAATGTCTACTCTCCAGGCCTGGGTCTCTAACCCCCAAAGGGCAATaGGGGGTCTGCAAGGAATGT +
Preference number: 4 (lower is better)
Translates to: FKKCLSEAKCLLSRPGSLTPKGQ*GVCKEC
Trigger: ACATTCCTTGCAGACCCCGCATTGCCCTTTGGGGGT...TAGAGACCCAGGCCTGGAGAGTAGACATTTTGCCTCTGATAAGCACTTTTTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TTTAAAAAGTGCTTATCAGAGGCAAAATGTCTACTCTCCAGGCCTGGGTCTCTAAGCAGCTGTGACAGCTaGTTCTTCCAACCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: FKKCLSEAKCLLSRPGSLSSCDS*FFQPGP
Trigger: TGGCCCTGGTTGGAAGAAGCAGCTGTCACAGCTGCT...TAGAGACCCAGGCCTGGAGAGTAGACATTTTGCCTCTGATAAGCACTTTTTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GCAGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGCACGCTCCCAAGACCTaGACCAAAGAGAATTATGGT +
Preference number: 4 (lower is better)
Translates to: AGDRIWLKWCMMRVKCSRHAPKT*TKENYG
Trigger: ACCATAATTCTCTTTGGTGCAGGTCTTGGGAGCGTG...CCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GGGCAGCCAGCTGCACGGACAGTCACTGAATATTGTGTGTTCTCTCTGTCCCCACTTAGAATTGTAAAATaGAAAATTGCCTTGGGCACC +
Preference number: 4 (lower is better)
Translates to: GQPAARTVTEYCVFSLSPLRIVK*KIALGT
Trigger: GGTGCCCAAGGCAATTTTGCATTTTACAATTCTAAG...TGGGGACAGAGAGAACACACAATATTCAGTGACTGTCCGTGCAGCTGGCTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR GCA 90 bp AACTCTTGGGGACTTTTGAAGATAATGACGAGCATCCGCAGATGCTCTAAGGTTCTCCTAACAGGGCTTTaGAGCTGGGACAGCCACATT +
Preference number: 4 (lower is better)
Translates to: NSWGLLKIMTSIRRCSKVLLTGL*SWDSHI
Trigger: AATGTGGCTGTCCCAGCTGCAAAGCCCTGTTAGGAG...AACCTTAGAGCATCTGCGGATGCTCGTCATTATCTTCAAAAGTCCCCAAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CCA 90 bp AAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGCCTTGTCATTGGTACTaGCCAATCTTTCTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: KVVHDEGKMQQGLSEPCGPCHWY*PIFLCH
Trigger: GTGGCAGAGAAAGATTGGCCAGTACCAATGACAAGG...CCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp GCAGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGCAATGGTGCACTGGTTaGTGGCTGGACACATATAGT +
Preference number: 4 (lower is better)
Translates to: AGDRIWLKWCMMRVKCSRQWCTG*WLDTYS
Trigger: ACTATATGTGTCCAGCCACCAACCAGTGCACCATTG...CCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp AGTGTCTGTGATCTTGTCCAGGACTCGGTGGATATGGTCCTTCTCTTCCAGAGATTATCAATGGTGCACTaGTTGGTGGCTGGACACATA +
Preference number: 4 (lower is better)
Translates to: SVCDLVQDSVDMVLLFQRLSMVH*LVAGHI
Trigger: TATGTGTCCAGCCACCAACCAGTGCACCATTGATAA...TCTCTGGAAGAGAAGGACCATATCCACCGAGTCCTGGACAAGATCACAGACACT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR CCA 90 bp CCTAACTTGATTCTGGAAACTTGTCTCCTGAACCATATATCCAGGAAACACTGGCCCTGTCTGCCAGGTTaGTCAGTAAGCCCATCATCG +
Preference number: 4 (lower is better)
Translates to: PNLILETCLLNHISRKHWPCLPG*SVSPSS
Trigger: CGATGATGGGCTTACTGACCAACCTGGCAGACAGGG...CCAGTGTTTCCTGGATATATGGTTCAGGAGACAAGTTTCCAGAATCAAGTTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CCA 90 bp ATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCCCTGTCTGCCAGGTTaGTCAGTAAGCCCATCATCG +
Preference number: 4 (lower is better)
Translates to: IWLKWCMMRVKCSRDYLNPCLPG*SVSPSS
Trigger: CGATGATGGGCTTACTGACCAACCTGGCAGACAGGG...GTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp GCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTAGGACTCGGTGGATATaGTCCTTCTCTTCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: AKVVHDEGKMQQGLSEPCRTRWI*SFSSRD
Trigger: GTCTCTGGAAGAGAAGGACCATATCCACCGAGTCCT...ACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTTTGTCCAGGACTCGGTaGATATGGTCCTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: WLKWCMMRVKCSRDYLNRLSRTR*IWSFSS
Trigger: GGAAGAGAAGGACCATATCCACCGAGTCCTGGACAA...ACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp CTTCCTCCTGTTTTTATCAATGGTGCACTGGTTGGTGGCTGGACACATATAGTCTTGTCCAGGACTCGGTaGATATGGTCCTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: LPPVFINGALVGGWTHIVLSRTR*IWSFSS
Trigger: GGAAGAGAAGGACCATATCCACCGAGTCCTGGACAA...GACTATATGTGTCCAGCCACCAACCAGTGCACCATTGATAAAAACAGGAGGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR CCA 90 bp TGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGCCTTGGCCATCAGGTaGATCAAAGTGTCTGTGATC +
Preference number: 4 (lower is better)
Translates to: WLKWCMMRVKCSRDYLNRALAIR*IKVSVI
Trigger: GATCACAGACACTTTGATCCACCTGATGGCCAAGGC...ACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp AAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGGAAAGCCATTGGTGTTaGATGCATGCCGGAGTGTAT +
Preference number: 4 (lower is better)
Translates to: KVVHDEGKMQQGLSEPCGESHWC*MHAGVY
Trigger: ATACACTCCGGCATGCATCCAACACCAATGGCTTTC...CCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp CCATTGGTGTTGGATGCATGCCGGAGTGTATGCAGGAGACAGAATTTGGCTAAACATCTAGAAAGCCATTaGTGTTGGATGCATGCCGGA +
Preference number: 4 (lower is better)
Translates to: PLVLDACRSVCRRQNLAKHLESH*CWMHAG
Trigger: TCCGGCATGCATCCAACACCAATGGCTTTCTAGATG...TTTAGCCAAATTCTGTCTCCTGCATACACTCCGGCATGCATCCAACACCAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp CTTTCCCTCTTGTTCTCTAGTAGCCACAACAATCCTGCACAAGTACTGTTCAGCGCCTTGGAATCCCTTTaGCTGTTCCCAACAGAAGAC +
Preference number: 4 (lower is better)
Translates to: LSLLFSSSHNNPAQVLFSALESL*LFPTED
Trigger: GTCTTCTGTTGGGAACAGCCAAAGGGATTCCAAGGC...GCTGAACAGTACTTGTGCAGGATTGTTGTGGCTACTAGAGAACAAGAGGGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp CCATTGGTGTTGGATGCATGCCGGAGTGTATGCAGGAGACAGAATTTGGCTAAATCTACTCTCCAGGCCTaGGTCTCTACAAGTAGCTTA +
Preference number: 4 (lower is better)
Translates to: PLVLDACRSVCRRQNLAKSTLQA*VSTSSL
Trigger: TAAGCTACTTGTAGAGACCCAGGCCTGGAGAGTAGA...TTTAGCCAAATTCTGTCTCCTGCATACACTCCGGCATGCATCCAACACCAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp GCAAGGGGGAAAGAGAGCTGTTACAAAGATTTAGCCTTGGAATCCCTTTGGCTGTCTACTCTCCAGGCCTaGGTCTCTACAAGTAGCTTA +
Preference number: 4 (lower is better)
Translates to: ARGKESCYKDLALESLWLSTLQA*VSTSSL
Trigger: TAAGCTACTTGTAGAGACCCAGGCCTGGAGAGTAGA...CAGCCAAAGGGATTCCAAGGCTAAATCTTTGTAACAGCTCTCTTTCCCCCTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp ACAGCTCTAAACACACACACTGACGATGGGTTTGGAACATGGCAGCATTTACATCACCCTGAGCAAGTCTaGCTGTGCCTCAGAACTGTA +
Preference number: 4 (lower is better)
Translates to: TALNTHTDDGFGTWQHLHHPEQV*LCLRTV
Trigger: TACAGTTCTGAGGCACAGCCAGACTTGCTCAGGGTG...ATGTAAATGCTGCCATGTTCCAAACCCATCGTCAGTGTGTGTGTTTAGAGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp CCCTACTTTCCCTCTTGTTCTCTAGTAGCCACAACAATCCTGCACAAGTACTGTGAAATGAAGAAGAGCTaGACTACCCCAGGGATCCCA +
Preference number: 4 (lower is better)
Translates to: PYFPSCSLVATTILHKYCEMKKS*TTPGIP
Trigger: TGGGATCCCTGGGGTAGTCCAGCTCTTCTTCATTTC...ACAGTACTTGTGCAGGATTGTTGTGGCTACTAGAGAACAAGAGGGAAAGTAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TTTCCAAACAAGACATACCAAGAGAAGCCCGAGCAGCTCACCTGGGTCATTGGCCCACTAGCTATTCCATaGACTTTACTGCTGATGTTG +
Preference number: 4 (lower is better)
Translates to: FPNKTYQEKPEQLTWVIGPLAIP*TLLLML
Trigger: CAACATCAGCAGTAAAGTCCATGGAATAGCTAGTGG...GCCAATGACCCAGGTGAGCTGCTCGGGCTTCTCTTGGTATGTCTTGTTTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp GTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGCCACTAGCTATTCCATaGACTTTACTGCTGATGTTG +
Preference number: 4 (lower is better)
Translates to: VHDEGKMQQGLSEPCGSQPLAIP*TLLLML
Trigger: CAACATCAGCAGTAAAGTCCATGGAATAGCTAGTGG...CTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTCCTACCCTTGGAGGCTaGAAAGTACCCTATGCTTTC +
Preference number: 4 (lower is better)
Translates to: WLKWCMMRVKCSRDYLNRPTLGG*KVPYAF
Trigger: GAAAGCATAGGGTACTTTCCAGCCTCCAAGGGTAGG...ACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS-3UTR CCA 90 bp CGAGAAGGGGGAAAGCGCTTATGTTATGATGCAACGCCAACAGCAGTCACTCTTGGCTTGTCACTGGGCTaGCAGGAGATTATTTTTAAG +
Preference number: 4 (lower is better)
Translates to: REGGKRLCYDATPTAVTLGLSLG*QEIIFK
Trigger: CTTAAAAATAATCTCCTGCCAGCCCAGTGACAAGCC...AAGAGTGACTGCTGTTGGCGTTGCATCATAACATAAGCGCTTTCCCCCTTCTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CCA 90 bp AAAATGTCGAAGGCATCGTTTCTTAGGGCAGCAAGTGCTTCCTCATGCCTCCTAGTGGTTGAACATTCTTaGGCTTCGTTACCGTCGGTA +
Preference number: 4 (lower is better)
Translates to: KMSKASFLRAASASSCLLVVEHS*ASLPSV
Trigger: TACCGACGGTAACGAAGCCCAAGAATGTTCAACCAC...TAGGAGGCATGAGGAAGCACTTGCTGCCCTAAGAAACGATGCCTTCGACATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR TCA 90 bp CTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGCTGGCGTCGATTATCTaGATTTGGCCTGTAGAATGC +
Preference number: 4 (lower is better)
Translates to: LKWCMMRVKCSRDYLNRVLASII*IWPVEC
Trigger: GCATTCTACAGGCCAAATTCAGATAATCGACGCCAG...CACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp TATGGTTGCCTTTTGAGCTACTGTATGACTCTATTTGCCTTTCACATAACTAGCGCCCAGTTGATCATGTaGACCAGCTCCCTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: YGCLLSYCMTLFAFHITSAQLIM*TSSLSA
Trigger: GGCAGACAGGGAGCTGGTTCACATGATCAACTGGGC...GCTAGTTATGTGAAAGGCAAATAGAGTCATACAGTAGCTCAAAAGGCAACCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp ACAGCTCTAAACACACACACTGACGATGGGTTTGGAACATGGCAGCATTTACATTCTAGAAGGTGGACCTaGTCATGGAGGGTCAAATCC +
Preference number: 4 (lower is better)
Translates to: TALNTHTDDGFGTWQHLHSRRWT*SWRVKS
Trigger: GGATTTGACCCTCCATGATCAGGTCCACCTTCTAGA...ATGTAAATGCTGCCATGTTCCAAACCCATCGTCAGTGTGTGTGTTTAGAGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp GACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCCTCTGCCTCCCCCGTaGTGTAATACTTTTGCAAGG +
Preference number: 4 (lower is better)
Translates to: DRIWLKWCMMRVKCSRDYPLPPP*CNTFAR
Trigger: CCTTGCAAAAGTATTACATCACGGGGGAGGCAGAGG...ATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp CCAATACCAACATCAGCCAGAAAATATCTGCTGTCCATTAGTGGCACTTCAAGTCCTCTGCCTCCCCCGTaGTGTAATACTTTTGCAAGG +
Preference number: 4 (lower is better)
Translates to: PIPTSARKYLLSISGTSSPLPPP*CNTFAR
Trigger: CCTTGCAAAAGTATTACATCACGGGGGAGGCAGAGG...ACTTGAAGTGCCACTAATGGACAGCAGATATTTTCTGGCTGATGTTGGTATTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp ATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACTGTCTACAGCAGCTGTaGCAGCTGCTTCTTCCAACC +
Preference number: 4 (lower is better)
Translates to: IWLKWCMMRVKCSRDYLNCLQQL*QLLLPT
Trigger: GGTTGGAAGAAGCAGCTGTCACAGCTGCTGTAGACA...GTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp CCAATACCAACATCAGCCAGAAAATATCTGCTGTCCATTAGTGGCACTTCAAGTTGTCTACAGCAGCTGTaGCAGCTGCTTCTTCCAACC +
Preference number: 4 (lower is better)
Translates to: PIPTSARKYLLSISGTSSCLQQL*QLLLPT
Trigger: GGTTGGAAGAAGCAGCTGTCACAGCTGCTGTAGACA...ACTTGAAGTGCCACTAATGGACAGCAGATATTTTCTGGCTGATGTTGGTATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp AATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAAAGAAGTGGACTCTACTaGACCCTGGTGCACACCCAG +
Preference number: 4 (lower is better)
Translates to: NLAKVVHDEGKMQQGLSERSGLY*TLVHTQ
Trigger: CTGGGTGTGCACCAGGGTTCAGTAGAGTCCACTTCT...TTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp CTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGTAAATGGAGCTAGTTaGTTTGTGGTCTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: LKWCMMRVKCSRDYLNRVVNGAS*FVVSRA
Trigger: TGCCCTGGAGACCACAAATCAACTAGCTCCATTTAC...CACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp CATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGATATGTTTTTGTGCTTTaGAAGACCCCCAGTATTGCA +
Preference number: 4 (lower is better)
Translates to: HDEGKMQQGLSEPCGSQGYVFVL*KTPSIA
Trigger: TGCAATACTGGGGGTCTTTCAAAGCACAAAAACATA...TCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS-3UTR TCA 90 bp GACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATACTAACACGCAATACTaGGGTGCTCCTAGAGTGCCC +
Preference number: 4 (lower is better)
Translates to: DRIWLKWCMMRVKCSRDYTNTQY*GAPRVP
Trigger: GGGCACTCTAGGAGCACCTCAGTATTGCGTGTTAGT...ATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS-3UTR TCA 90 bp CTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGCAGTCCCGGAGAATGTaGAGAGATCTTTGTGCTTAC +
Preference number: 4 (lower is better)
Translates to: LKWCMMRVKCSRDYLNRVQSRRM*RDLCAY
Trigger: GTAAGCACAAAGATCTCTTCACATTCTCCGGGACTG...CACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440973.5
CDS-3UTR TCA 90 bp AAAATGTCGAAGGCATCGTTTCTTAGGGCAGCAAGTGCTTCCTCATGCCTCCTAATGAGAAGTGGCAAATaGCTGGCCGAAACACTGAAA +
Preference number: 4 (lower is better)
Translates to: KMSKASFLRAASASSCLLMRSGK*LAETLK
Trigger: TTTCAGTGTTTCGGCCAGTCATTTGCCACTTCTCAT...TAGGAGGCATGAGGAAGCACTTGCTGCCCTAAGAAACGATGCCTTCGACATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR TCA 90 bp CCTAACTTGATTCTGGAAACTTGTCTCCTGAACCATATATCCAGGAAACACTGGTCTGCTGGGGAAGAATaGACTTCACCCACAGTCCAG +
Preference number: 4 (lower is better)
Translates to: PNLILETCLLNHISRKHWSAGEE*TSPTVQ
Trigger: CTGGACTGTGGGTGAAGTTCATTCTTCCCCAGCAGA...CCAGTGTTTCCTGGATATATGGTTCAGGAGACAAGTTTCCAGAATCAAGTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR GCA 90 bp AAAATGTCGAAGGCATCGTTTCTTAGGGCAGCAAGTGCTTCCTCATGCCTCCTAATAGTCATTGCACACTaGACAGTAGCGAGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: KMSKASFLRAASASSCLLIVIAH*TVASLL
Trigger: AAGGAGACTCGCTACTGTGCAGTGTGCAATGACTAT...TAGGAGGCATGAGGAAGCACTTGCTGCCCTAAGAAACGATGCCTTCGACATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR GCA 90 bp CTTTCCCTCTTGTTCTCTAGTAGCCACAACAATCCTGCACAAGTACTGTTCAGCACAAACTCCTCTCCCTaGAGATTCATCATGCGGAAC +
Preference number: 4 (lower is better)
Translates to: LSLLFSSSHNNPAQVLFSTNSSP*RFIMRN
Trigger: GTTCCGCATGATGAATCTGCAGGGAGAGGAGTTTGT...GCTGAACAGTACTTGTGCAGGATTGTTGTGGCTACTAGAGAACAAGAGGGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GTTTCTGCCCTACTTTCCCTCTTGTTCTCTAGTAGCCACAACAATCCTGCACAAACAAACTCCTCTCCCTaGAGATTCATCATGCGGAAC +
Preference number: 4 (lower is better)
Translates to: VSALLSLLFSSSHNNPAQTNSSP*RFIMRN
Trigger: GTTCCGCATGATGAATCTGCAGGGAGAGGAGTTTGT...TTGTGCAGGATTGTTGTGGCTACTAGAGAACAAGAGGGAAAGTAGGGCAGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp AAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGATACTTTTGCAAGGAATaGGATGAAGTAGAGCCCGCA +
Preference number: 4 (lower is better)
Translates to: KWCMMRVKCSRDYLNRVGYFCKE*DEVEPA
Trigger: TGCGGGCTCTACTTCATCGCATTCCTTGCAAAAGTA...TCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp ACAGCTCTAAACACACACACTGACGATGGGTTTGGAACATGGCAGCATTTACATTTGGTGTTGGATGCATaGCGGAGTGTATGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: TALNTHTDDGFGTWQHLHLVLDA*RSVCRR
Trigger: TCTCCTGCATACACTCCGGCATGCATCCAACACCAA...ATGTAAATGCTGCCATGTTCCAAACCCATCGTCAGTGTGTGTGTTTAGAGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCCATAAAAGGATGCATTaGCATAGGAATACAAGAGGG +
Preference number: 4 (lower is better)
Translates to: WCMMRVKCSRDYLNRVGAHKRMH*HRNTRG
Trigger: CCCTCTTGTATTCCTATGGCAATGCATCCTTTTATG...GGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp AAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAAAATTGTTTACAGGTaGTCGAGCATCCCGCTGGAT +
Preference number: 4 (lower is better)
Translates to: KVVHDEGKMQQGLSEPCGKIVYR*SSIPLD
Trigger: ATCCAGCGGGATGCTCGAGCACCTGTAAACAATTTT...CCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCCCTATGCTTTCTGCTaGCACCCCAAGCAAGAGGAA +
Preference number: 4 (lower is better)
Translates to: DRIWLKWCMMRVKCSRDYPYAFC*HPKQEE
Trigger: TTCCTCTTGCTTGGGGTGGCAGCAGAAAGCATAGGG...ATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS-3UTR CCA 90 bp CCATTGGTGTTGGATGCATGCCGGAGTGTATGCAGGAGACAGAATTTGGCTAAACTTTCTCTGCCACCCTaGCGTCGATTATCTGAATTT +
Preference number: 4 (lower is better)
Translates to: PLVLDACRSVCRRQNLAKLSLPP*RRLSEF
Trigger: AAATTCAGATAATCGACGCCAGGGTGGCAGAGAAAG...TTTAGCCAAATTCTGTCTCCTGCATACACTCCGGCATGCATCCAACACCAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TCTTTGGTTCCCAAATATTGCGTCTATCTGCTCTCCGCATTGTTTCAGACAGCCCAATGGTGCACTGGTTaGTGGCTGGACACATATAGT +
Preference number: 4 (lower is better)
Translates to: SLVPKYCVYLLSALFQTAQWCTG*WLDTYS
Trigger: ACTATATGTGTCCAGCCACCAACCAGTGCACCATTG...GGCTGTCTGAAACAATGCGGAGAGCAGATAGACGCAATATTTGGGAACCAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CCA 90 bp GCAGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGTTATCAATGGTGCACTaGTTGGTGGCTGGACACATA +
Preference number: 4 (lower is better)
Translates to: AGDRIWLKWCMMRVKCSRLSMVH*LVAGHI
Trigger: TATGTGTCCAGCCACCAACCAGTGCACCATTGATAA...CCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TCTACTGAACCCTGGTGCACACCCAGAATTAACCATTTTCCTCCAAATACTTTCCAAATCCACAAAGCCTaGCACCCTCTTCGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: STEPWCTPRINHFPPNTFQIHKA*HPLRPV
Trigger: AACTGGGCGAAGAGGGTGCCAGGCTTTGTGGATTTG...GAAAGTATTTGGAGGAAAATGGTTAATTCTGGGTGTGCACCAGGGTTCAGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp AAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGATCTACACATTTTCCCTaGTTCCTGTCCAAGAGCAAG +
Preference number: 4 (lower is better)
Translates to: KWCMMRVKCSRDYLNRVGSTHFP*FLSKSK
Trigger: CTTGCTCTTGGACAGGAACCAGGGAAAATGTGTAGA...TCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGAGACTTCAGGGTGCTaGACAGAAATGTGTACACTC +
Preference number: 4 (lower is better)
Translates to: WLKWCMMRVKCSRDYLNRETSGC*TEMCTL
Trigger: GAGTGTACACATTTCTGTCCAGCACCCTGAAGTCTC...ACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TATGGTTGCCTTTTGAGCTACTGTATGACTCTATTTGCCTTTCACATAACTAGCGTGGCCAAGTGGCTTTaGTCCGTCTCCTCCACGGAT +
Preference number: 4 (lower is better)
Translates to: YGCLLSYCMTLFAFHITSVAKWL*SVSSTD
Trigger: ATCCGTGGAGGAGACGGACCAAAGCCACTTGGCCAC...GCTAGTTATGTGAAAGGCAAATAGAGTCATACAGTAGCTCAAAAGGCAACCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp CTTTCCCTCTTGTTCTCTAGTAGCCACAACAATCCTGCACAAGTACTGTTCAGCGAAAGCCATTGGTGTTaGATGCATGCCGGAGTGTAT +
Preference number: 4 (lower is better)
Translates to: LSLLFSSSHNNPAQVLFSESHWC*MHAGVY
Trigger: ATACACTCCGGCATGCATCCAACACCAATGGCTTTC...GCTGAACAGTACTTGTGCAGGATTGTTGTGGCTACTAGAGAACAAGAGGGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TGCACAGCTCTAAACACACACACTGACGATGGGTTTGGAACATGGCAGCATTTACATCTAGAAAGCCATTaGTGTTGGATGCATGCCGGA +
Preference number: 4 (lower is better)
Translates to: CTALNTHTDDGFGTWQHLHLESH*CWMHAG
Trigger: TCCGGCATGCATCCAACACCAATGGCTTTCTAGATG...TAAATGCTGCCATGTTCCAAACCCATCGTCAGTGTGTGTGTTTAGAGCTGTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TCTACTGAACCCTGGTGCACACCCAGAATTAACCATTTTCCTCCAAATACTTTCTCTCCAGGGCAGAAGTaGACTCTACTGAACCCTGGT +
Preference number: 4 (lower is better)
Translates to: STEPWCTPRINHFPPNTFSPGQK*TLLNPG
Trigger: ACCAGGGTTCAGTAGAGTCCACTTCTGCCCTGGAGA...GAAAGTATTTGGAGGAAAATGGTTAATTCTGGGTGTGCACCAGGGTTCAGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp GCAGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGCATGGGCTATGGCTTaGTTAAACATATCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: AGDRIWLKWCMMRVKCSRAWAMA*LNISAR
Trigger: CCTTGCAGATATGTTTAACCAAGCCATAGCCCATGC...CCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TTTCCAAACAAGACATACCAAGAGAAGCCCGAGCAGCTCACCTGGGTCATTGGCCACCAAAGAGAATTATaGTTGCCTTTTGAGCTACTG +
Preference number: 4 (lower is better)
Translates to: FPNKTYQEKPEQLTWVIGHQREL*LPFELL
Trigger: CAGTAGCTCAAAAGGCAACCATAATTCTCTTTGGTG...GCCAATGACCCAGGTGAGCTGCTCGGGCTTCTCTTGGTATGTCTTGTTTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp GCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTTGCACTGACCGTGATTaGGAACGAGGTCTCTCATTT +
Preference number: 4 (lower is better)
Translates to: AKVVHDEGKMQQGLSEPCCTDRD*ERGLSF
Trigger: AAATGAGAGACCTCGTTCCCAATCACGGTCAGTGCA...ACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS-3UTR CCA 90 bp ATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACTGTTTGTGCGTGGAATaGCAGGGATTCGGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: IWLKWCMMRVKCSRDYLNCLCVE*QGFGKQ
Trigger: CTGCTTCCCGAATCCCTGCCATTCCACGCACAAACA...GTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS-3UTR CCA 90 bp AACTCTTGGGGACTTTTGAAGATAATGACGAGCATCCGCAGATGCTCTAAGGTTGGACAGGCTTGTCACTaGGCTGGCAGGAGATTATTT +
Preference number: 4 (lower is better)
Translates to: NSWGLLKIMTSIRRCSKVGQACH*AGRRLF
Trigger: AAATAATCTCCTGCCAGCCCAGTGACAAGCCTGTCC...AACCTTAGAGCATCTGCGGATGCTCGTCATTATCTTCAAAAGTCCCCAAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CCA 90 bp GGGGGAAAGCGCTTATGTTATGATGCAACGCCAACAGCAGTCACTCTTTGGTTCACAGGTGTTGAGTGTTaGTTGCCAGGGCATATTTTA +
Preference number: 4 (lower is better)
Translates to: GGKRLCYDATPTAVTLWFTGVEC*LPGHIL
Trigger: TAAAATATGCCCTGGCAACCAACACTCAACACCTGT...GAACCAAAGAGTGACTGCTGTTGGCGTTGCATCATAACATAAGCGCTTTCCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CCA 90 bp TCTTTGGTTCCCAAATATTGCGTCTATCTGCTCTCCGCATTGTTTCAGACAGCCAAAGGCAGAGTCTGCTaGGGAAGAATGAACTTCACC +
Preference number: 4 (lower is better)
Translates to: SLVPKYCVYLLSALFQTAKGRVC*GRMNFT
Trigger: GGTGAAGTTCATTCTTCCCCAGCAGACTCTGCCTTT...GGCTGTCTGAAACAATGCGGAGAGCAGATAGACGCAATATTTGGGAACCAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR CAA 72 bp TTGGATGCATGCCGGAGTGTATGCAGGAGACAGAATTaGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAG +
Preference number: 4 (lower is better)
Translates to: LDACRSVCRRQN*AKVVHDEGKMQ
Trigger: CTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCTGCATACACTCCGGCATGCATCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR CAA 72 bp CAAATGAATGGCCACTCATCTAGAAAGCCATTGGTGTaGGATGCATGCCGGAGTGTATGCAGGAGACAGAAT +
Preference number: 4 (lower is better)
Translates to: QMNGHSSRKPLV*DACRSVCRRQN
Trigger: ATTCTGTCTCCTGCATACACTCCGGCATGCATCCAACACCAATGGCTTTCTAGATGAGTGGCCATTCATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR CAA 72 bp ACATCTGAATCTGCAGTGTATCAAGTTAAAATAGTCTaGCCAACTAGGGGATCTGCCTTCCCTGTGTGCCCC +
Preference number: 4 (lower is better)
Translates to: TSESAVYQVKIV*PTRGSAFPVCP
Trigger: GGGGCACACAGGGAAGGCAGATCCCCTAGTTGGCAAGACTATTTTAACTTGATACACTGCAGATTCAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp ACAGCTCTAAACACACACACTGACGATGGGTTTGGAACATGGCAGCATTTACATCTGGCGTCGATTATCTaGATTTGGCCTGTAGAATGC +
Preference number: 4 (lower is better)
Translates to: TALNTHTDDGFGTWQHLHLASII*IWPVEC
Trigger: GCATTCTACAGGCCAAATTCAGATAATCGACGCCAG...ATGTAAATGCTGCCATGTTCCAAACCCATCGTCAGTGTGTGTGTTTAGAGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp CAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTTCTAGAAGGTGGACCTaGTCATGGAGGGTCAAATCC +
Preference number: 4 (lower is better)
Translates to: QNLAKVVHDEGKMQQGLSSRRWT*SWRVKS
Trigger: GGATTTGACCCTCCATGATCAGGTCCACCTTCTAGA...AGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp AGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGATGCACAGAGTTATCTaGGCCCCAACCCATAGACTG +
Preference number: 4 (lower is better)
Translates to: RIWLKWCMMRVKCSRDYLMHRVI*APTHRL
Trigger: CAGTCTATGGGTTGGGGCTCAGATAACTCTGTGCAT...CAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp AGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTAATGCACAGAGTTATCTaGGCCCCAACCCATAGACTG +
Preference number: 4 (lower is better)
Translates to: RQNLAKVVHDEGKMQQGLMHRVI*APTHRL
Trigger: CAGTCTATGGGTTGGGGCTCAGATAACTCTGTGCAT...TAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp GCAGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGAGCTTTCAGCACATCTaGATCTGCAGTGTATCAAGT +
Preference number: 4 (lower is better)
Translates to: AGDRIWLKWCMMRVKCSRSFQHI*ICSVSS
Trigger: ACTTGATACACTGCAGATTCAGATGTGCTGAAAGCT...CCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp CCATTGGTGTTGGATGCATGCCGGAGTGTATGCAGGAGACAGAATTTGGCTAAATTCTCAGTCCTTTGGTaGTCACTTAACTGGACAATC +
Preference number: 4 (lower is better)
Translates to: PLVLDACRSVCRRQNLAKFSVLW*SLNWTI
Trigger: GATTGTCCAGTTAAGTGATCACCAAAGGACTGAGAA...TTTAGCCAAATTCTGTCTCCTGCATACACTCCGGCATGCATCCAACACCAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp GTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGAAGCAGATCTGCCTGTaGATATTAGACATTACTATG +
Preference number: 4 (lower is better)
Translates to: VHDEGKMQQGLSEPCGSQKQICL*ILDITM
Trigger: CATAGTAATGTCTAATATTCACAGGCAGATCTGCTT...CTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp ATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGAAGCAGATCTGCCTGTaGATATTAGACATTACTATG +
Preference number: 4 (lower is better)
Translates to: MMRVKCSRDYLNRVGAREKQICL*ILDITM
Trigger: CATAGTAATGTCTAATATTCACAGGCAGATCTGCTT...CTCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp CCCTACTTTCCCTCTTGTTCTCTAGTAGCCACAACAATCCTGCACAAGTACTGTTCTAAACACACACACTaGCGATGGGTTTGGAACATG +
Preference number: 4 (lower is better)
Translates to: PYFPSCSLVATTILHKYCSKHTH*RWVWNM
Trigger: CATGTTCCAAACCCATCGTCAGTGTGTGTGTTTAGA...ACAGTACTTGTGCAGGATTGTTGTGGCTACTAGAGAACAAGAGGGAAAGTAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp GCAGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGACACTATGCAGTTACTaGGAGATTTATGAGTGGCTC +
Preference number: 4 (lower is better)
Translates to: AGDRIWLKWCMMRVKCSRTLCSY*EIYEWL
Trigger: GAGCCACTCATAAATCTCTCAGTAACTGCATAGTGT...CCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS-3UTR TCA 90 bp GGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATCCACAAACCTTTCCATaGATAGCTCAGTTGACTGCT +
Preference number: 4 (lower is better)
Translates to: GDRIWLKWCMMRVKCSRDPQTFP*IAQLTA
Trigger: AGCAGTCAACTGAGCTATTCATGGAAAGGTTTGTGG...ATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS-3UTR TCA 90 bp TTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGCTGTTAAAGAGCTTCTaGGCATGGAGCCTGCATTTT +
Preference number: 4 (lower is better)
Translates to: LAKVVHDEGKMQQGLSEPLLKSF*AWSLHF
Trigger: AAAATGCAGGCTCCATGCTCAGAAGCTCTTTAACAG...CGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440973.5
CDS-3UTR TCA 90 bp CCTAACTTGATTCTGGAAACTTGTCTCCTGAACCATATATCCAGGAAACACTGGCATTTTTCTCAGGAGTaGACAGGTCAATGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: PNLILETCLLNHISRKHWHFSQE*TGQWAA
Trigger: GGCTGCCCATTGACCTGTTCACTCCTGAGAAAAATG...CCAGTGTTTCCTGGATATATGGTTCAGGAGACAAGTTTCCAGAATCAAGTTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR TCA 90 bp ATTCCTTCGAGGATACCAGAGATCAGTTCTTTGGTTGATACAAATGATAGTGACCAACCCCTAAGGGTATaGGTCGGCACACCCTTGGTA +
Preference number: 4 (lower is better)
Translates to: IPSRIPEISSLVDTNDSDQPLRV*VGTPLV
Trigger: TACCAAGGGTGTGCCGACTCATACCCTTAGGGGTTG...GTCACTATCATTTGTATCAACCAAAGAACTGATCTCTGGTATCCTCGAAGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR GCA 90 bp TTTAAAAAGTGCTTATCAGAGGCAAAATGTCTACTCTCCAGGCCTGGGTCTCTATGGCCAATCTTTCTCTaGCACCCTGGCGTCGATTAT +
Preference number: 4 (lower is better)
Translates to: FKKCLSEAKCLLSRPGSLWPIFL*HPGVDY
Trigger: ATAATCGACGCCAGGGTGGCAGAGAAAGATTGGCCA...TAGAGACCCAGGCCTGGAGAGTAGACATTTTGCCTCTGATAAGCACTTTTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp AGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGTGGCCAATCTTTCTCTaGCACCCTGGCGTCGATTAT +
Preference number: 4 (lower is better)
Translates to: RIWLKWCMMRVKCSRDYLWPIFL*HPGVDY
Trigger: ATAATCGACGCCAGGGTGGCAGAGAAAGATTGGCCA...CAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GTTTCTGCCCTACTTTCCCTCTTGTTCTCTAGTAGCCACAACAATCCTGCACAAATAGTCATTGCACACTaGACAGTAGCGAGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: VSALLSLLFSSSHNNPAQIVIAH*TVASLL
Trigger: AAGGAGACTCGCTACTGTGCAGTGTGCAATGACTAT...TTGTGCAGGATTGTTGTGGCTACTAGAGAACAAGAGGGAAAGTAGGGCAGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTATAGTCATTGCACACTaGACAGTAGCGAGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: WLKWCMMRVKCSRDYLNRIVIAH*TVASLL
Trigger: AAGGAGACTCGCTACTGTGCAGTGTGCAATGACTAT...ACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp ACAGCTCTAAACACACACACTGACGATGGGTTTGGAACATGGCAGCATTTACATCTGAAGCATAGTCATTaGACACTGCACAGTAGCGAG +
Preference number: 4 (lower is better)
Translates to: TALNTHTDDGFGTWQHLHLKHSH*TLHSSE
Trigger: CTCGCTACTGTGCAGTGTGCAATGACTATGCTTCAG...ATGTAAATGCTGCCATGTTCCAAACCCATCGTCAGTGTGTGTGTTTAGAGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTTTTTATCAATGGTaGACTGGTTGGTGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: LAKVVHDEGKMQQGLSEPCFYQW*TGWWLD
Trigger: GTCCAGCCACCAACCAGTGCACCATTGATAAAAACA...CGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTTGTTTTTATCAATGGTaGACTGGTTGGTGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: WLKWCMMRVKCSRDYLNRCFYQW*TGWWLD
Trigger: GTCCAGCCACCAACCAGTGCACCATTGATAAAAACA...ACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GTTTCTGCCCTACTTTCCCTCTTGTTCTCTAGTAGCCACAACAATCCTGCACAATGTTTTTATCAATGGTaGACTGGTTGGTGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: VSALLSLLFSSSHNNPAQCFYQW*TGWWLD
Trigger: GTCCAGCCACCAACCAGTGCACCATTGATAAAAACA...TTGTGCAGGATTGTTGTGGCTACTAGAGAACAAGAGGGAAAGTAGGGCAGAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp CATATAAAAGCTTTAAGGTGTACCACTTTCATAAAAGGATGCATTGCCATAGGAAGTAGCTTCCCTGGGTaGTCCATGGAGCGCCAGACG +
Preference number: 4 (lower is better)
Translates to: HIKALRCTTFIKGCIAIGSSFPG*SMERQT
Trigger: CGTCTGGCGCTCCATGGAGCACCCAGGGAAGCTACT...TCCTATGGCAATGCATCCTTTTATGAAAGTGGTACACCTTAAAGCTTTTATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp AAATACAAAGAGATTTCCAAAGTTGCTGGAGACCCCTGGGCGAACATTTCAATCGGGGCACCACGTTCTTaGACTTCATGCTGTACAGAT +
Preference number: 4 (lower is better)
Translates to: KYKEISKVAGDPWANISIGAPRS*TSCCTD
Trigger: ATCTGTACAGCATGAAGTGCAAGAACGTGGTGCCCC...GATTGAAATGTTCGCCCAGGGGTCTCCAGCAACTTTGGAAATCTCTTTGTATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TCTACTGAACCCTGGTGCACACCCAGAATTAACCATTTTCCTCCAAATACTTTCGGGGCACCACGTTCTTaGACTTCATGCTGTACAGAT +
Preference number: 4 (lower is better)
Translates to: STEPWCTPRINHFPPNTFGAPRS*TSCCTD
Trigger: ATCTGTACAGCATGAAGTGCAAGAACGTGGTGCCCC...GAAAGTATTTGGAGGAAAATGGTTAATTCTGGGTGTGCACCAGGGTTCAGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp CTTTCCCTCTTGTTCTCTAGTAGCCACAACAATCCTGCACAAGTACTGTTCAGCTACTTTTGCAAGGAATaGGATGAAGTAGAGCCCGCA +
Preference number: 4 (lower is better)
Translates to: LSLLFSSSHNNPAQVLFSYFCKE*DEVEPA
Trigger: TGCGGGCTCTACTTCATCGCATTCCTTGCAAAAGTA...GCTGAACAGTACTTGTGCAGGATTGTTGTGGCTACTAGAGAACAAGAGGGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTTACTTTTGCAAGGAATaGGATGAAGTAGAGCCCGCA +
Preference number: 4 (lower is better)
Translates to: AKVVHDEGKMQQGLSEPCYFCKE*DEVEPA
Trigger: TGCGGGCTCTACTTCATCGCATTCCTTGCAAAAGTA...ACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GTTTCTGCCCTACTTTCCCTCTTGTTCTCTAGTAGCCACAACAATCCTGCACAATACTTTTGCAAGGAATaGGATGAAGTAGAGCCCGCA +
Preference number: 4 (lower is better)
Translates to: VSALLSLLFSSSHNNPAQYFCKE*DEVEPA
Trigger: TGCGGGCTCTACTTCATCGCATTCCTTGCAAAAGTA...TTGTGCAGGATTGTTGTGGCTACTAGAGAACAAGAGGGAAAGTAGGGCAGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp AATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAAGCCATTGGTGTTGGATaGATGCCGGAGTGTATGCAG +
Preference number: 4 (lower is better)
Translates to: NLAKVVHDEGKMQQGLSEAIGVG*MPECMQ
Trigger: CTGCATACACTCCGGCATGCATCCAACACCAATGGC...TTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp AAAGGCATGGGCTATGGCTTGGTTAAACATATCTGCAAGGTTACTAGGGAAATCAAGATCCAAGTACAGTaGCCACTGGAACAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: KGMGYGLVKHICKVTREIKIQVQ*PLEQVL
Trigger: CAGGACCTGTTCCAGTGGGCACTGTACTTGGATCTT...GATTTCCCTAGTAACCTTGCAGATATGTTTAACCAAGCCATAGCCCATGCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCAACACCAGGGCCCCTaGTCCTTTCAACTACCATTT +
Preference number: 4 (lower is better)
Translates to: DRIWLKWCMMRVKCSRDYQHQGP*SFQLPF
Trigger: AAATGGTAGTTGAAAGGAGCAGGGGCCCTGGTGTTG...ATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp AGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTAGAGCAAGTCTGGCTGTaGCTCAGAACTGTATCCAGT +
Preference number: 4 (lower is better)
Translates to: RQNLAKVVHDEGKMQQGLEQVWL*LRTVSS
Trigger: ACTGGATACAGTTCTGAGGCACAGCCAGACTTGCTC...TAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp CATATAAAAGCTTTAAGGTGTACCACTTTCATAAAAGGATGCATTGCCATAGGATCCCGTGCCCCAGGGTaGTGGGCCAATTGTAGGAAC +
Preference number: 4 (lower is better)
Translates to: HIKALRCTTFIKGCIAIGSRAPG*WANCRN
Trigger: GTTCCTACAATTGGCCCAGCACCCTGGGGCACGGGA...TCCTATGGCAATGCATCCTTTTATGAAAGTGGTACACCTTAAAGCTTTTATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp CAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTAGAGATTTCCAAAGTTaGTGGAGACCCCTGGGCGAA +
Preference number: 4 (lower is better)
Translates to: QNLAKVVHDEGKMQQGLSRDFQS*WRPLGE
Trigger: TTCGCCCAGGGGTCTCCAGCAACTTTGGAAATCTCT...AGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGAATCAAATCAAAGACTaGACTTCCTTAGGGGTTAGA +
Preference number: 4 (lower is better)
Translates to: VHDEGKMQQGLSEPCGSQNQIKD*TSLGVR
Trigger: TCTAACCCCTAAGGAAGTGCAGTCTTTGATTTGATT...CTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCCAATTGGAAAGGAAATaGAGTTGGAAACAGAGCATA +
Preference number: 4 (lower is better)
Translates to: WCMMRVKCSRDYLNRVGAQLERK*SWKQSI
Trigger: TATGCTCTGTTTCCAACTGCATTTCCTTTCCAATTG...GGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp CATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGACAATTGGAAAGGAAATaGAGTTGGAAACAGAGCATA +
Preference number: 4 (lower is better)
Translates to: HDEGKMQQGLSEPCGSQGQLERK*SWKQSI
Trigger: TATGCTCTGTTTCCAACTGCATTTCCTTTCCAATTG...TCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp CAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTTACATGTGGATCAAATaGCTTACTGGCCCTAGCCCC +
Preference number: 4 (lower is better)
Translates to: QNLAKVVHDEGKMQQGLSYMWIK*LTGPSP
Trigger: GGGGCTAGGGCCAGTAAGGCATTTGATCCACATGTA...AGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS-3UTR GCA 90 bp TGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCACGGCTAAAATAGAATaGCAGTCAAAAGTGTATGGA +
Preference number: 4 (lower is better)
Translates to: WCMMRVKCSRDYLNRVGATAKIE*QSKVYG
Trigger: TCCATACACTTTTGACTGGCATTCTATTTTAGCCGT...GGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS-3UTR GCA 90 bp GACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGGAAAGTACCCTATaGTTTCTGCTGCCACCCCAA +
Preference number: 4 (lower is better)
Translates to: DRIWLKWCMMRVKCSRDYLESTL*FLLPPQ
Trigger: TTGGGGTGGCAGCAGAAAGCATAGGGTACTTTCCAG...ATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS-3UTR CCA 90 bp TTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGCTTTCTCTGCCACCCTaGCGTCGATTATCTGAATTT +
Preference number: 4 (lower is better)
Translates to: LAKVVHDEGKMQQGLSEPLSLPP*RRLSEF
Trigger: AAATTCAGATAATCGACGCCAGGGTGGCAGAGAAAG...CGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TGCAGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGCTTTCTCTGCCACCCTaGCGTCGATTATCTGAATTT +
Preference number: 4 (lower is better)
Translates to: CRRQNLAKVVHDEGKMQQLSLPP*RRLSEF
Trigger: AAATTCAGATAATCGACGCCAGGGTGGCAGAGAAAG...CTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp ACAGCTCTAAACACACACACTGACGATGGGTTTGGAACATGGCAGCATTTACATCAATGGTGCACTGGTTaGTGGCTGGACACATATAGT +
Preference number: 4 (lower is better)
Translates to: TALNTHTDDGFGTWQHLHQWCTG*WLDTYS
Trigger: ACTATATGTGTCCAGCCACCAACCAGTGCACCATTG...ATGTAAATGCTGCCATGTTCCAAACCCATCGTCAGTGTGTGTGTTTAGAGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TGCACAGCTCTAAACACACACACTGACGATGGGTTTGGAACATGGCAGCATTTATTATCAATGGTGCACTaGTTGGTGGCTGGACACATA +
Preference number: 4 (lower is better)
Translates to: CTALNTHTDDGFGTWQHLLSMVH*LVAGHI
Trigger: TATGTGTCCAGCCACCAACCAGTGCACCATTGATAA...TAAATGCTGCCATGTTCCAAACCCATCGTCAGTGTGTGTGTTTAGAGCTGTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp GGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTCCTGTTTTTATCAATaGTGCACTGGTTGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GDRIWLKWCMMRVKCSRDSCFYQ*CTGWWL
Trigger: CAGCCACCAACCAGTGCACCATTGATAAAAACAGGA...ATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp ATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACAGGACTCGGTGGATATaGTCCTTCTCTTCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: IWLKWCMMRVKCSRDYLNRTRWI*SFSSRD
Trigger: GTCTCTGGAAGAGAAGGACCATATCCACCGAGTCCT...GTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TTTAAAAAGTGCTTATCAGAGGCAAAATGTCTACTCTCCAGGCCTGGGTCTCTATTGTCCAGGACTCGGTaGATATGGTCCTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: FKKCLSEAKCLLSRPGSLLSRTR*IWSFSS
Trigger: GGAAGAGAAGGACCATATCCACCGAGTCCTGGACAA...TAGAGACCCAGGCCTGGAGAGTAGACATTTTGCCTCTGATAAGCACTTTTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TTCAATACTCTTCTTAATATATTTGCCATTCCCCAGATTCCTGAATCCACTTCCGGGTCAGGCCTGCCTTaGCCATCAGGTGGATCAAAG +
Preference number: 4 (lower is better)
Translates to: FNTLLNIFAIPQIPESTSGSGLP*PSGGSK
Trigger: CTTTGATCCACCTGATGGCCAAGGCAGGCCTGACCC...GGAAGTGGATTCAGGAATCTGGGGAATGGCAAATATATTAAGAAGAGTATTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGAGAATTTGGCTAAAGTaGTGCATGATGAGGGTAAAA +
Preference number: 4 (lower is better)
Translates to: CMMRVKCSRDYLNRVGARRIWLK*CMMRVK
Trigger: TTTTACCCTCATCATGCACCACTTTAGCCAAATTCT...CCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp AGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTAGCCTTGGAATCCCTTTaGCTGTTCCCAACAGAAGAC +
Preference number: 4 (lower is better)
Translates to: RQNLAKVVHDEGKMQQGLALESL*LFPTED
Trigger: GTCTTCTGTTGGGAACAGCCAAAGGGATTCCAAGGC...TAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp CCAATACCAACATCAGCCAGAAAATATCTGCTGTCCATTAGTGGCACTTCAAGTGAAATGAAGAAGAGCTaGACTACCCCAGGGATCCCA +
Preference number: 4 (lower is better)
Translates to: PIPTSARKYLLSISGTSSEMKKS*TTPGIP
Trigger: TGGGATCCCTGGGGTAGTCCAGCTCTTCTTCATTTC...ACTTGAAGTGCCACTAATGGACAGCAGATATTTTCTGGCTGATGTTGGTATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp AAATACAAAGAGATTTCCAAAGTTGCTGGAGACCCCTGGGCGAACATTTCAATCCGGCAAGCTAGGCAATaGCGAAAAGAAACACAGACC +
Preference number: 4 (lower is better)
Translates to: KYKEISKVAGDPWANISIRQARQ*RKETQT
Trigger: GGTCTGTGTTTCTTTTCGCCATTGCCTAGCTTGCCG...GATTGAAATGTTCGCCCAGGGGTCTCCAGCAACTTTGGAAATCTCTTTGTATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp ACAGCTCTAAACACACACACTGACGATGGGTTTGGAACATGGCAGCATTTACATAGCCCTCAAAAGGCATaGGCTATGGCTTGGTTAAAC +
Preference number: 4 (lower is better)
Translates to: TALNTHTDDGFGTWQHLHSPQKA*AMAWLN
Trigger: GTTTAACCAAGCCATAGCCCATGCCTTTTGAGGGCT...ATGTAAATGCTGCCATGTTCCAAACCCATCGTCAGTGTGTGTGTTTAGAGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TTTCCAAACAAGACATACCAAGAGAAGCCCGAGCAGCTCACCTGGGTCATTGGCACGCTACTGAAAAGATaGATATTTGGGACCAAAGTT +
Preference number: 4 (lower is better)
Translates to: FPNKTYQEKPEQLTWVIGTLLKR*IFGTKV
Trigger: AACTTTGGTCCCAAATATCCATCTTTTCAGTAGCGT...GCCAATGACCCAGGTGAGCTGCTCGGGCTTCTCTTGGTATGTCTTGTTTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp GATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGCTGAAAGGAAATGCAGTTaGAAACAGAGCATAATTAAC +
Preference number: 4 (lower is better)
Translates to: DEGKMQQGLSEPCGSQGAERKCS*KQSIIN
Trigger: GTTAATTATGCTCTGTTTCCAACTGCATTTCCTTTC...AGCTCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTCTTCTGGGATACATGTaGATCAAATGCCTTACTGGC +
Preference number: 4 (lower is better)
Translates to: WLKWCMMRVKCSRDYLNRLLGYM*IKCLTG
Trigger: GCCAGTAAGGCATTTGATCCACATGTATCCCAGAAG...ACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS-3UTR CCA 90 bp TTTAAAAAGTGCTTATCAGAGGCAAAATGTCTACTCTCCAGGCCTGGGTCTCTATGCTGTGCTGATATTTaGTACCGCAGTCCCGGAGAA +
Preference number: 4 (lower is better)
Translates to: FKKCLSEAKCLLSRPGSLCCADI*YRSPGE
Trigger: TTCTCCGGGACTGCGGTACCAAATATCAGCACAGCA...TAGAGACCCAGGCCTGGAGAGTAGACATTTTGCCTCTGATAAGCACTTTTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440973.5
CDS-3UTR CCA 90 bp AAAATGTCGAAGGCATCGTTTCTTAGGGCAGCAAGTGCTTCCTCATGCCTCCTAGACTTCTTCCTAGCTTaGCGTTCTTCAGCATTAGAA +
Preference number: 4 (lower is better)
Translates to: KMSKASFLRAASASSCLLDFFLA*RSSALE
Trigger: TTCTAATGCTGAAGAACGCCAAGCTAGGAAGAAGTC...TAGGAGGCATGAGGAAGCACTTGCTGCCCTAAGAAACGATGCCTTCGACATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CCA 90 bp CACTCTTTGGTTCCCAAATATTGCGTCTATCTGCTCTCCGCATTGTTTCAGACAGAGGAGAATGACCAGTaGGTAGTCAACAAGTTGCCT +
Preference number: 4 (lower is better)
Translates to: HSLVPKYCVYLLSALFQTEENDQ*VVNKLP
Trigger: AGGCAACTTGTTGACTACCCACTGGTCATTCTCCTC...TGTCTGAAACAATGCGGAGAGCAGATAGACGCAATATTTGGGAACCAAAGAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR CAA 72 bp GCTCTCCGCATTGTTTCAGACAGCCACATAGATCTTTaGAAAATGTCGAAGGCATCGTTTCTTAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: ALRIVSDSHIDL*KMSKASFLRAA
Trigger: TGCTGCCCTAAGAAACGATGCCTTCGACATTTTCAAAAGATCTATGTGGCTGTCTGAAACAATGCGGAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR TCA 90 bp TGCAGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGCTATAATAAACCCTTaGCCTAGCTTTCTCCAAGTC +
Preference number: 4 (lower is better)
Translates to: CRRQNLAKVVHDEGKMQQAIINP*PSFLQV
Trigger: GACTTGGAGAAAGCTAGGTCAAGGGTTTATTATAGC...CTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp CCCTACTTTCCCTCTTGTTCTCTAGTAGCCACAACAATCCTGCACAAGTACTGTATAGGGGGAATGAATTaGCAATCACCAGATACTCTG +
Preference number: 4 (lower is better)
Translates to: PYFPSCSLVATTILHKYCIGGMN*QSPDTL
Trigger: CAGAGTATCTGGTGATTGTCAATTCATTCCCCCTAT...ACAGTACTTGTGCAGGATTGTTGTGGCTACTAGAGAACAAGAGGGAAAGTAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp TGCAGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGATAGGGGGAATGAATTaGCAATCACCAGATACTCTG +
Preference number: 4 (lower is better)
Translates to: CRRQNLAKVVHDEGKMQQIGGMN*QSPDTL
Trigger: CAGAGTATCTGGTGATTGTCAATTCATTCCCCCTAT...CTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp CTTTCCCTCTTGTTCTCTAGTAGCCACAACAATCCTGCACAAGTACTGTTCAGCATAGGGGGAATGAATTaGCAATCACCAGATACTCTG +
Preference number: 4 (lower is better)
Translates to: LSLLFSSSHNNPAQVLFSIGGMN*QSPDTL
Trigger: CAGAGTATCTGGTGATTGTCAATTCATTCCCCCTAT...GCTGAACAGTACTTGTGCAGGATTGTTGTGGCTACTAGAGAACAAGAGGGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp GCAAGGGGGAAAGAGAGCTGTTACAAAGATTTAGCCTTGGAATCCCTTTGGCTGCCCCAAACCAAACCCTaGTTTTGGATTATCTCTAAA +
Preference number: 4 (lower is better)
Translates to: ARGKESCYKDLALESLWLPQTKP*FWIISK
Trigger: TTTAGAGATAATCCAAAATCAGGGTTTGGTTTGGGG...CAGCCAAAGGGATTCCAAGGCTAAATCTTTGTAACAGCTCTCTTTCCCCCTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp TGCAGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGTTCTCAGTCCTTTGGTaGTCACTTAACTGGACAATC +
Preference number: 4 (lower is better)
Translates to: CRRQNLAKVVHDEGKMQQFSVLW*SLNWTI
Trigger: GATTGTCCAGTTAAGTGATCACCAAAGGACTGAGAA...CTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp CTTTCCCTCTTGTTCTCTAGTAGCCACAACAATCCTGCACAAGTACTGTTCAGCTTCTCAGTCCTTTGGTaGTCACTTAACTGGACAATC +
Preference number: 4 (lower is better)
Translates to: LSLLFSSSHNNPAQVLFSFSVLW*SLNWTI
Trigger: GATTGTCCAGTTAAGTGATCACCAAAGGACTGAGAA...GCTGAACAGTACTTGTGCAGGATTGTTGTGGCTACTAGAGAACAAGAGGGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp GCAGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGAGTCTCTATAACCAATaGCCTCTCTGTGAATGCAAA +
Preference number: 4 (lower is better)
Translates to: AGDRIWLKWCMMRVKCSRSLYNQ*PLCECK
Trigger: TTTGCATTCACAGAGAGGTCATTGGTTATAGAGACT...CCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp GTTTCTGCCCTACTTTCCCTCTTGTTCTCTAGTAGCCACAACAATCCTGCACAAACAAGAGCTCTACACTaGAGAGTATGTAGTGCACAA +
Preference number: 4 (lower is better)
Translates to: VSALLSLLFSSSHNNPAQTRALH*RVCSAQ
Trigger: TTGTGCACTACATACTCTTCAGTGTAGAGCTCTTGT...TTGTGCAGGATTGTTGTGGCTACTAGAGAACAAGAGGGAAAGTAGGGCAGAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp GGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATAAAACAGGCTTGCTGTaGATCATAGTCTTACGGCTA +
Preference number: 4 (lower is better)
Translates to: GDRIWLKWCMMRVKCSRDKTGLL*IIVLRL
Trigger: TAGCCGTAAGACTATGATTCACAGCAAGCCTGTTTT...ATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS-3UTR TCA 90 bp AACTCTTGGGGACTTTTGAAGATAATGACGAGCATCCGCAGATGCTCTAAGGTTTGCACGGACAGTCACTaGATATTGTGTGTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: NSWGLLKIMTSIRRCSKVCTDSH*ILCVLS
Trigger: AGAGAGAACACACAATATTCAGTGACTGTCCGTGCA...AACCTTAGAGCATCTGCGGATGCTCGTCATTATCTTCAAAAGTCCCCAAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR TCA 90 bp CCTAACTTGATTCTGGAAACTTGTCTCCTGAACCATATATCCAGGAAACACTGGGATACGCATTCTTCCTaGGAGGAGAAAGAGACTGAG +
Preference number: 4 (lower is better)
Translates to: PNLILETCLLNHISRKHWDTHSS*EEKETE
Trigger: CTCAGTCTCTTTCTCCTCTCAGGAAGAATGCGTATC...CCAGTGTTTCCTGGATATATGGTTCAGGAGACAAGTTTCCAGAATCAAGTTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR GCA 90 bp TTTAAAAAGTGCTTATCAGAGGCAAAATGTCTACTCTCCAGGCCTGGGTCTCTACTGAAGCATAGTCATTaGACACTGCACAGTAGCGAG +
Preference number: 4 (lower is better)
Translates to: FKKCLSEAKCLLSRPGSLLKHSH*TLHSSE
Trigger: CTCGCTACTGTGCAGTGTGCAATGACTATGCTTCAG...TAGAGACCCAGGCCTGGAGAGTAGACATTTTGCCTCTGATAAGCACTTTTTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp CACTCTTTGGTTCCCAAATATTGCGTCTATCTGCTCTCCGCATTGTTTCAGACATGTTTTTATCAATGGTaGACTGGTTGGTGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: HSLVPKYCVYLLSALFQTCFYQW*TGWWLD
Trigger: GTCCAGCCACCAACCAGTGCACCATTGATAAAAACA...TGTCTGAAACAATGCGGAGAGCAGATAGACGCAATATTTGGGAACCAAAGAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR GCA 90 bp GACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCGAAGATCTCCACCATaGCCTCTACACATTTTCCCT +
Preference number: 4 (lower is better)
Translates to: DRIWLKWCMMRVKCSRDYRRSPP*PLHIFP
Trigger: AGGGAAAATGTGTAGAGGGCATGGTGGAGATCTTCG...ATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp CCTAACTTGATTCTGGAAACTTGTCTCCTGAACCATATATCCAGGAAACACTGGACAAACTCCTCTCCCTaGAGATTCATCATGCGGAAC +
Preference number: 4 (lower is better)
Translates to: PNLILETCLLNHISRKHWTNSSP*RFIMRN
Trigger: GTTCCGCATGATGAATCTGCAGGGAGAGGAGTTTGT...CCAGTGTTTCCTGGATATATGGTTCAGGAGACAAGTTTCCAGAATCAAGTTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR GCA 90 bp TCTACTGAACCCTGGTGCACACCCAGAATTAACCATTTTCCTCCAAATACTTTCACAAACTCCTCTCCCTaGAGATTCATCATGCGGAAC +
Preference number: 4 (lower is better)
Translates to: STEPWCTPRINHFPPNTFTNSSP*RFIMRN
Trigger: GTTCCGCATGATGAATCTGCAGGGAGAGGAGTTTGT...GAAAGTATTTGGAGGAAAATGGTTAATTCTGGGTGTGCACCAGGGTTCAGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp CAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTCCAGAGACTTCAGGGTaGTGGACAGAAATGTGTACA +
Preference number: 4 (lower is better)
Translates to: QNLAKVVHDEGKMQQGLSPETSG*WTEMCT
Trigger: TGTACACATTTCTGTCCAGCACCCTGAAGTCTCTGG...AGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp AAAGGCATGGGCTATGGCTTGGTTAAACATATCTGCAAGGTTACTAGGGAAATCCCAGAGACTTCAGGGTaGTGGACAGAAATGTGTACA +
Preference number: 4 (lower is better)
Translates to: KGMGYGLVKHICKVTREIPETSG*WTEMCT
Trigger: TGTACACATTTCTGTCCAGCACCCTGAAGTCTCTGG...GATTTCCCTAGTAACCTTGCAGATATGTTTAACCAAGCCATAGCCCATGCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp AGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTACCAGAGACTTCAGGGTaGTGGACAGAAATGTGTACA +
Preference number: 4 (lower is better)
Translates to: RQNLAKVVHDEGKMQQGLPETSG*WTEMCT
Trigger: TGTACACATTTCTGTCCAGCACCCTGAAGTCTCTGG...TAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp AATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAAAGAGATTTCCAAAGTTaGTGGAGACCCCTGGGCGAA +
Preference number: 4 (lower is better)
Translates to: NLAKVVHDEGKMQQGLSERDFQS*WRPLGE
Trigger: TTCGCCCAGGGGTCTCCAGCAACTTTGGAAATCTCT...TTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATCAGCCAGAAAATATCTaGTGTCCATTAGTGGCACTT +
Preference number: 4 (lower is better)
Translates to: GDRIWLKWCMMRVKCSRDQPENI*CPLVAL
Trigger: AAGTGCCACTAATGGACAGCAGATATTTTCTGGCTG...ATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp CAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTCACGCTCCCAAGACCTaGACCAAAGAGAATTATGGT +
Preference number: 4 (lower is better)
Translates to: QNLAKVVHDEGKMQQGLSHAPKT*TKENYG
Trigger: ACCATAATTCTCTTTGGTGCAGGTCTTGGGAGCGTG...AGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp CTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGATGTTGTTTCTAGGGTaGACAGCTCTAAACACACAC +
Preference number: 4 (lower is better)
Translates to: LKWCMMRVKCSRDYLNRVMLFLG*TALNTH
Trigger: GTGTGTGTTTAGAGCTGTGCACCCTAGAAACAACAT...CACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp AGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTACAATGGAGGCTTTGTTaGCAGACATTAGTCACCACC +
Preference number: 4 (lower is better)
Translates to: RQNLAKVVHDEGKMQQGLQWRLC*QTLVTT
Trigger: GGTGGTGACTAATGTCTGGCAACAAAGCCTCCATTG...TAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS-3UTR GCA 90 bp GCAGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGTCTGAGCATGGAGCCTaGATTTTCAGTTTTGGTAAA +
Preference number: 4 (lower is better)
Translates to: AGDRIWLKWCMMRVKCSRSEHGA*IFSFGK
Trigger: TTTACCAAAACTGAAAATGCAGGCTCCATGCTCAGA...CCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000440973.5
CDS-3UTR GCA 90 bp AACTCTTGGGGACTTTTGAAGATAATGACGAGCATCCGCAGATGCTCTAAGGTTATGAAAGGCAGAGTCTaGTGGGGAAGAATGAACTTC +
Preference number: 4 (lower is better)
Translates to: NSWGLLKIMTSIRRCSKVMKGRV*WGRMNF
Trigger: GAAGTTCATTCTTCCCCAGCAGACTCTGCCTTTCAT...AACCTTAGAGCATCTGCGGATGCTCGTCATTATCTTCAAAAGTCCCCAAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR GCA 90 bp ATTCCTTCGAGGATACCAGAGATCAGTTCTTTGGTTGATACAAATGATAGTGACGCAAGTGCTTCCTCATaGCTCCTAACAGGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: IPSRIPEISSLVDTNDSDASASS*LLTGLC
Trigger: GCAAAGCCCTGTTAGGAGGCATGAGGAAGCACTTGC...GTCACTATCATTTGTATCAACCAAAGAACTGATCTCTGGTATCCTCGAAGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CCA 90 bp AACTCTTGGGGACTTTTGAAGATAATGACGAGCATCCGCAGATGCTCTAAGGTTCTTTCTCTGCCACCCTaGCGTCGATTATCTGAATTT +
Preference number: 4 (lower is better)
Translates to: NSWGLLKIMTSIRRCSKVLSLPP*RRLSEF
Trigger: AAATTCAGATAATCGACGCCAGGGTGGCAGAGAAAG...AACCTTAGAGCATCTGCGGATGCTCGTCATTATCTTCAAAAGTCCCCAAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CCA 90 bp GACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCCTTGTCATTGGTACTaGCCAATCTTTCTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: DRIWLKWCMMRVKCSRDYPCHWY*PIFLCH
Trigger: GTGGCAGAGAAAGATTGGCCAGTACCAATGACAAGG...ATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp GACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATGCACTGGTTGGTGGCTaGACACATATAGTCGTTATG +
Preference number: 4 (lower is better)
Translates to: DRIWLKWCMMRVKCSRDYALVGG*THIVVM
Trigger: CATAACGACTATATGTGTCCAGCCACCAACCAGTGC...ATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp AGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGCAATGGTGCACTGGTTaGTGGCTGGACACATATAGT +
Preference number: 4 (lower is better)
Translates to: RIWLKWCMMRVKCSRDYLQWCTG*WLDTYS
Trigger: ACTATATGTGTCCAGCCACCAACCAGTGCACCATTG...CAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp CAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTCAATGGTGCACTGGTTaGTGGCTGGACACATATAGT +
Preference number: 4 (lower is better)
Translates to: QNLAKVVHDEGKMQQGLSQWCTG*WLDTYS
Trigger: ACTATATGTGTCCAGCCACCAACCAGTGCACCATTG...AGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp ACAGCTCTAAACACACACACTGACGATGGGTTTGGAACATGGCAGCATTTACATTCCCCATCATCTCTCTaGCGCTTGTGTTTCAACATT +
Preference number: 4 (lower is better)
Translates to: TALNTHTDDGFGTWQHLHSPSSL*RLCFNI
Trigger: AATGTTGAAACACAAGCGCCAGAGAGATGATGGGGA...ATGTAAATGCTGCCATGTTCCAAACCCATCGTCAGTGTGTGTGTTTAGAGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp AACTCTTGGGGACTTTTGAAGATAATGACGAGCATCCGCAGATGCTCTAAGGTTTCCCCATCATCTCTCTaGCGCTTGTGTTTCAACATT +
Preference number: 4 (lower is better)
Translates to: NSWGLLKIMTSIRRCSKVSPSSL*RLCFNI
Trigger: AATGTTGAAACACAAGCGCCAGAGAGATGATGGGGA...AACCTTAGAGCATCTGCGGATGCTCGTCATTATCTTCAAAAGTCCCCAAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CCA 90 bp CTGGCCTTCAGTTTTCTCATTTGCAAAGATGAGGGGTGCATTAATATCCTAAAACAAATCCACAAAGCCTaGCACCCTCTTCGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: LAFSFLICKDEGCINILKQIHKA*HPLRPV
Trigger: AACTGGGCGAAGAGGGTGCCAGGCTTTGTGGATTTG...TTTTAGGATATTAATGCACCCCTCATCTTTGCAAATGAGAAAACTGAAGGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CCA 90 bp AACTCTTGGGGACTTTTGAAGATAATGACGAGCATCCGCAGATGCTCTAAGGTTTCTACACATTTTCCCTaGTTCCTGTCCAAGAGCAAG +
Preference number: 4 (lower is better)
Translates to: NSWGLLKIMTSIRRCSKVSTHFP*FLSKSK
Trigger: CTTGCTCTTGGACAGGAACCAGGGAAAATGTGTAGA...AACCTTAGAGCATCTGCGGATGCTCGTCATTATCTTCAAAAGTCCCCAAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CCA 90 bp CAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAGACTTCAGGGTGCTaGACAGAAATGTGTACACTC +
Preference number: 4 (lower is better)
Translates to: QNLAKVVHDEGKMQQGLSETSGC*TEMCTL
Trigger: GAGTGTACACATTTCTGTCCAGCACCCTGAAGTCTC...AGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp AATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAAGATTTCCAAAGTTGCTaGAGACCCCTGGGCGAACAT +
Preference number: 4 (lower is better)
Translates to: NLAKVVHDEGKMQQGLSEDFQSC*RPLGEH
Trigger: ATGTTCGCCCAGGGGTCTCCAGCAACTTTGGAAATC...TTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp AAATACAAAGAGATTTCCAAAGTTGCTGGAGACCCCTGGGCGAACATTTCAATCGACTCTACTGAACCCTaGTGCACACCCAGAATTAAC +
Preference number: 4 (lower is better)
Translates to: KYKEISKVAGDPWANISIDSTEP*CTPRIN
Trigger: GTTAATTCTGGGTGTGCACCAGGGTTCAGTAGAGTC...GATTGAAATGTTCGCCCAGGGGTCTCCAGCAACTTTGGAAATCTCTTTGTATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TATGGTTGCCTTTTGAGCTACTGTATGACTCTATTTGCCTTTCACATAACTAGCTCTCCAGGGCAGAAGTaGACTCTACTGAACCCTGGT +
Preference number: 4 (lower is better)
Translates to: YGCLLSYCMTLFAFHITSSPGQK*TLLNPG
Trigger: ACCAGGGTTCAGTAGAGTCCACTTCTGCCCTGGAGA...GCTAGTTATGTGAAAGGCAAATAGAGTCATACAGTAGCTCAAAAGGCAACCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp GGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATCCACTAGCTATTCCATaGACTTTACTGCTGATGTTG +
Preference number: 4 (lower is better)
Translates to: GDRIWLKWCMMRVKCSRDPLAIP*TLLLML
Trigger: CAACATCAGCAGTAAAGTCCATGGAATAGCTAGTGG...ATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp AATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACGGCAAGCTAGGCAATaGCGAAAAGAAACACAGACC +
Preference number: 4 (lower is better)
Translates to: NLAKVVHDEGKMQQGLSERQARQ*RKETQT
Trigger: GGTCTGTGTTTCTTTTCGCCATTGCCTAGCTTGCCG...TTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp AAAGGCATGGGCTATGGCTTGGTTAAACATATCTGCAAGGTTACTAGGGAAATCAGCCCTCAAAAGGCATaGGCTATGGCTTGGTTAAAC +
Preference number: 4 (lower is better)
Translates to: KGMGYGLVKHICKVTREISPQKA*AMAWLN
Trigger: GTTTAACCAAGCCATAGCCCATGCCTTTTGAGGGCT...GATTTCCCTAGTAACCTTGCAGATATGTTTAACCAAGCCATAGCCCATGCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp CTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGAGTACTCTAAGCCAGTaGCCTAAATCAATGGCCATT +
Preference number: 4 (lower is better)
Translates to: LKWCMMRVKCSRDYLNRVSTLSQ*PKSMAI
Trigger: AATGGCCATTGATTTAGGCCACTGGCTTAGAGTACT...CACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp CTTTCCCTCTTGTTCTCTAGTAGCCACAACAATCCTGCACAAGTACTGTTCAGCAGTACTCTAAGCCAGTaGCCTAAATCAATGGCCATT +
Preference number: 4 (lower is better)
Translates to: LSLLFSSSHNNPAQVLFSSTLSQ*PKSMAI
Trigger: AATGGCCATTGATTTAGGCCACTGGCTTAGAGTACT...GCTGAACAGTACTTGTGCAGGATTGTTGTGGCTACTAGAGAACAAGAGGGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp CCATTGGTGTTGGATGCATGCCGGAGTGTATGCAGGAGACAGAATTTGGCTAAACACCAAAGAGAATTATaGTTGCCTTTTGAGCTACTG +
Preference number: 4 (lower is better)
Translates to: PLVLDACRSVCRRQNLAKHQREL*LPFELL
Trigger: CAGTAGCTCAAAAGGCAACCATAATTCTCTTTGGTG...TTTAGCCAAATTCTGTCTCCTGCATACACTCCGGCATGCATCCAACACCAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp GGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTCAGGCACCTGCTCATaGGACAATATGTTGTTTCTA +
Preference number: 4 (lower is better)
Translates to: GDRIWLKWCMMRVKCSRDSGTCS*DNMLFL
Trigger: TAGAAACAACATATTGTCCCATGAGCAGGTGCCTGA...ATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp CTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGTCAGGCACCTGCTCATaGGACAATATGTTGTTTCTA +
Preference number: 4 (lower is better)
Translates to: LKWCMMRVKCSRDYLNRVSGTCS*DNMLFL
Trigger: TAGAAACAACATATTGTCCCATGAGCAGGTGCCTGA...CACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TGCACAGCTCTAAACACACACACTGACGATGGGTTTGGAACATGGCAGCATTTATCAGGCACCTGCTCATaGGACAATATGTTGTTTCTA +
Preference number: 4 (lower is better)
Translates to: CTALNTHTDDGFGTWQHLSGTCS*DNMLFL
Trigger: TAGAAACAACATATTGTCCCATGAGCAGGTGCCTGA...TAAATGCTGCCATGTTCCAAACCCATCGTCAGTGTGTGTGTTTAGAGCTGTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp AAAGGCATGGGCTATGGCTTGGTTAAACATATCTGCAAGGTTACTAGGGAAATCGCTCGAGCATCCCGCTaGATTCTTTTTCAAAGTGCA +
Preference number: 4 (lower is better)
Translates to: KGMGYGLVKHICKVTREIARASR*ILFQSA
Trigger: TGCACTTTGAAAAAGAATCCAGCGGGATGCTCGAGC...GATTTCCCTAGTAACCTTGCAGATATGTTTAACCAAGCCATAGCCCATGCCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp AGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGGCTCGAGCATCCCGCTaGATTCTTTTTCAAAGTGCA +
Preference number: 4 (lower is better)
Translates to: RIWLKWCMMRVKCSRDYLARASR*ILFQSA
Trigger: TGCACTTTGAAAAAGAATCCAGCGGGATGCTCGAGC...CAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp CATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAACAATAAAAGCCTTCTaGGATACATGTGGATCAAAT +
Preference number: 4 (lower is better)
Translates to: HDEGKMQQGLSEPCGSQGTIKAF*DTCGSN
Trigger: ATTTGATCCACATGTATCCCAGAAGGCTTTTATTGT...TCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS-3UTR CCA 90 bp CACTCTTTGGTTCCCAAATATTGCGTCTATCTGCTCTCCGCATTGTTTCAGACAAGATGGAATGAGAAGTaGCAAATGACTGGCCGAAAC +
Preference number: 4 (lower is better)
Translates to: HSLVPKYCVYLLSALFQTRWNEK*QMTGRN
Trigger: GTTTCGGCCAGTCATTTGCCACTTCTCATTCCATCT...TGTCTGAAACAATGCGGAGAGCAGATAGACGCAATATTTGGGAACCAAAGAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CCA 90 bp ACCCCGAGAATGAAAGGCAGAGTCTGCTGGGGAAGAATGAACTTCACCCACAGTAGCAATAATAAAGTATaGAGAAAAACTCTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: TPRMKGRVCWGRMNFTHSSNNKV*RKTLGD
Trigger: GTCCCCAAGAGTTTTTCTCCATACTTTATTATTGCT...ACTGTGGGTGAAGTTCATTCTTCCCCAGCAGACTCTGCCTTTCATTCTCGGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR CAA 72 bp AGACTTCTCACAATTGTGTGTCCTACACACTTTCTTTaGAAGGGTGTGATTTTAGCCACTACTCCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: RLLTIVCPTHFL*KGVILATTPSL
Trigger: CAGGGAGGGAGTAGTGGCTAAAATCACACCCTTCAAAAGAAAGTGTGTAGGACACACAATTGTGAGAAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR CAA 72 bp CACAGCATTCCTTCGAGGATACCAGAGATCAGTTCTTaGGTTGATACAAATGATAGTGACGAGAAGGGGGAA +
Preference number: 4 (lower is better)
Translates to: HSIPSRIPEISS*VDTNDSDEKGE
Trigger: TTCCCCCTTCTCGTCACTATCATTTGTATCAACCAAAGAACTGATCTCTGGTATCCTCGAAGGAATGCTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR TCA 90 bp TATGGTTGCCTTTTGAGCTACTGTATGACTCTATTTGCCTTTCACATAACTAGCTCTAGAAGGTGGACCTaGTCATGGAGGGTCAAATCC +
Preference number: 4 (lower is better)
Translates to: YGCLLSYCMTLFAFHITSSRRWT*SWRVKS
Trigger: GGATTTGACCCTCCATGATCAGGTCCACCTTCTAGA...GCTAGTTATGTGAAAGGCAAATAGAGTCATACAGTAGCTCAAAAGGCAACCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp ACAGTTGACAAACAGGAGCTATTCAGCTCTGTCAGATTGTACTATCAATTATATCATGCGGAACCGAGATaGTGTAGCCAGCAGCATGTC +
Preference number: 4 (lower is better)
Translates to: TVDKQELFSSVRLYYQLYHAEPR*CSQQHV
Trigger: GACATGCTGCTGGCTACATCATCTCGGTTCCGCATG...ATATAATTGATAGTACAATCTGACAGAGCTGAATAGCTCCTGTTTGTCAACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR TCA 90 bp CATATAAAAGCTTTAAGGTGTACCACTTTCATAAAAGGATGCATTGCCATAGGATTGCAAGGAATGCGATaGAGTAGAGCCCGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: HIKALRCTTFIKGCIAIGLQGMR*SRARSG
Trigger: GCCACTGCGGGCTCTACTTCATCGCATTCCTTGCAA...TCCTATGGCAATGCATCCTTTTATGAAAGTGGTACACCTTAAAGCTTTTATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp TTCAATACTCTTCTTAATATATTTGCCATTCCCCAGATTCCTGAATCCACTTCCCCTCTGCCTCCCCCGTaGTGTAATACTTTTGCAAGG +
Preference number: 4 (lower is better)
Translates to: FNTLLNIFAIPQIPESTSPLPPP*CNTFAR
Trigger: CCTTGCAAAAGTATTACATCACGGGGGAGGCAGAGG...GGAAGTGGATTCAGGAATCTGGGGAATGGCAAATATATTAAGAAGAGTATTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp TTCAATACTCTTCTTAATATATTTGCCATTCCCCAGATTCCTGAATCCACTTCCTGTCTACAGCAGCTGTaGCAGCTGCTTCTTCCAACC +
Preference number: 4 (lower is better)
Translates to: FNTLLNIFAIPQIPESTSCLQQL*QLLLPT
Trigger: GGTTGGAAGAAGCAGCTGTCACAGCTGCTGTAGACA...GGAAGTGGATTCAGGAATCTGGGGAATGGCAAATATATTAAGAAGAGTATTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp CCCTACTTTCCCTCTTGTTCTCTAGTAGCCACAACAATCCTGCACAAGTACTGTATTGTTTATCACCTGTaGGAGAACAGAAACTGGCAT +
Preference number: 4 (lower is better)
Translates to: PYFPSCSLVATTILHKYCIVYHL*ENRNWH
Trigger: ATGCCAGTTTCTGTTCTCTCACAGGTGATAAACAAT...ACAGTACTTGTGCAGGATTGTTGTGGCTACTAGAGAACAAGAGGGAAAGTAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp GTTTCTGCCCTACTTTCCCTCTTGTTCTCTAGTAGCCACAACAATCCTGCACAAATTGTTTATCACCTGTaGGAGAACAGAAACTGGCAT +
Preference number: 4 (lower is better)
Translates to: VSALLSLLFSSSHNNPAQIVYHL*ENRNWH
Trigger: ATGCCAGTTTCTGTTCTCTCACAGGTGATAAACAAT...TTGTGCAGGATTGTTGTGGCTACTAGAGAACAAGAGGGAAAGTAGGGCAGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp GCAAGGGGGAAAGAGAGCTGTTACAAAGATTTAGCCTTGGAATCCCTTTGGCTGACACAATTTGGCATTTaGGCCTTTTCCCATAAAACA +
Preference number: 4 (lower is better)
Translates to: ARGKESCYKDLALESLWLTQFGI*AFSHKT
Trigger: TGTTTTATGGGAAAAGGCTCAAATGCCAAATTGTGT...CAGCCAAAGGGATTCCAAGGCTAAATCTTTGTAACAGCTCTCTTTCCCCCTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp AAAATGTCGAAGGCATCGTTTCTTAGGGCAGCAAGTGCTTCCTCATGCCTCCTACTTTGCTTCTACATGTaGGATACCAGAATTAAGCAA +
Preference number: 4 (lower is better)
Translates to: KMSKASFLRAASASSCLLLCFYM*DTRIKQ
Trigger: TTGCTTAATTCTGGTATCTCACATGTAGAAGCAAAG...TAGGAGGCATGAGGAAGCACTTGCTGCCCTAAGAAACGATGCCTTCGACATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR TCA 90 bp ATTCCTTCGAGGATACCAGAGATCAGTTCTTTGGTTGATACAAATGATAGTGACTACTGTGAGGCCTTATaGCCAGAGGCTTTAGACACG +
Preference number: 4 (lower is better)
Translates to: IPSRIPEISSLVDTNDSDYCEAL*PEALDT
Trigger: CGTGTCTAAAGCCTCTGGTCATAAGGCCTCACAGTA...GTCACTATCATTTGTATCAACCAAAGAACTGATCTCTGGTATCCTCGAAGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR TCA 90 bp CACTCTTTGGTTCCCAAATATTGCGTCTATCTGCTCTCCGCATTGTTTCAGACATTCCCCACAAATTGCTaGTGTACCATGAACAGAGAT +
Preference number: 4 (lower is better)
Translates to: HSLVPKYCVYLLSALFQTFPTNC*CTMNRD
Trigger: ATCTCTGTTCATGGTACATCAGCAATTTGTGGGGAA...TGTCTGAAACAATGCGGAGAGCAGATAGACGCAATATTTGGGAACCAAAGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR GCA 90 bp ATTCCTTCGAGGATACCAGAGATCAGTTCTTTGGTTGATACAAATGATAGTGACTGGCCAATCTTTCTCTaGCACCCTGGCGTCGATTAT +
Preference number: 4 (lower is better)
Translates to: IPSRIPEISSLVDTNDSDWPIFL*HPGVDY
Trigger: ATAATCGACGCCAGGGTGGCAGAGAAAGATTGGCCA...GTCACTATCATTTGTATCAACCAAAGAACTGATCTCTGGTATCCTCGAAGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR GCA 90 bp GCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTATTTGGCTAAAGTGGTaGATGATGAGGGTAAAATGC +
Preference number: 4 (lower is better)
Translates to: AKVVHDEGKMQQGLSEPCIWLKW*MMRVKC
Trigger: GCATTTTACCCTCATCATGCACCACTTTAGCCAAAT...ACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TTTCATAAAAGGATGCATTGCCATAGGAATACAAGAGGGTGCTATAATAAACCCGCCATTGGTGTTGGATaGATGCCGGAGTGTATGCAG +
Preference number: 4 (lower is better)
Translates to: FHKRMHCHRNTRGCYNKPAIGVG*MPECMQ
Trigger: CTGCATACACTCCGGCATGCATCCAACACCAATGGC...GGGTTTATTATAGCACCCTCTTGTATTCCTATGGCAATGCATCCTTTTATGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATAGGAATACAAGAGGGTaGTATAATAAACCCTTGACC +
Preference number: 4 (lower is better)
Translates to: GDRIWLKWCMMRVKCSRDRNTRG*YNKPLT
Trigger: GGTCAAGGGTTTATTATAGCACCCTCTTGTATTCCT...ATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTCATAAAAGGATGCATTaGCATAGGAATACAAGAGGG +
Preference number: 4 (lower is better)
Translates to: AKVVHDEGKMQQGLSEPCHKRMH*HRNTRG
Trigger: CCCTCTTGTATTCCTATGGCAATGCATCCTTTTATG...ACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TGTACCACTTTCATAAAAGGATGCATTGCCATAGGAATACAAGAGGGTGCTATATCTGCCTTCCCTGTGTaGCCCTTGTATTCCTATAGG +
Preference number: 4 (lower is better)
Translates to: CTTFIKGCIAIGIQEGAISAFPV*PLYSYR
Trigger: CCTATAGGAATACAAGGGGCACACAGGGAAGGCAGA...TATAGCACCCTCTTGTATTCCTATGGCAATGCATCCTTTTATGAAAGTGGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TGTACCACTTTCATAAAAGGATGCATTGCCATAGGAATACAAGAGGGTGCTATAAAGATCCAAGTACAGTaGCCACTGGAACAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: CTTFIKGCIAIGIQEGAIKIQVQ*PLEQVL
Trigger: CAGGACCTGTTCCAGTGGGCACTGTACTTGGATCTT...TATAGCACCCTCTTGTATTCCTATGGCAATGCATCCTTTTATGAAAGTGGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TATGGTTGCCTTTTGAGCTACTGTATGACTCTATTTGCCTTTCACATAACTAGCGAGCAAGTCTGGCTGTaGCTCAGAACTGTATCCAGT +
Preference number: 4 (lower is better)
Translates to: YGCLLSYCMTLFAFHITSEQVWL*LRTVSS
Trigger: ACTGGATACAGTTCTGAGGCACAGCCAGACTTGCTC...GCTAGTTATGTGAAAGGCAAATAGAGTCATACAGTAGCTCAAAAGGCAACCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp ACAGCTCTAAACACACACACTGACGATGGGTTTGGAACATGGCAGCATTTACATCAGCCAGAAAATATCTaGTGTCCATTAGTGGCACTT +
Preference number: 4 (lower is better)
Translates to: TALNTHTDDGFGTWQHLHQPENI*CPLVAL
Trigger: AAGTGCCACTAATGGACAGCAGATATTTTCTGGCTG...ATGTAAATGCTGCCATGTTCCAAACCCATCGTCAGTGTGTGTGTTTAGAGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp AAATACAAAGAGATTTCCAAAGTTGCTGGAGACCCCTGGGCGAACATTTCAATCTCTACTGAACCCTGGTaGACACCCAGAATTAACCAT +
Preference number: 4 (lower is better)
Translates to: KYKEISKVAGDPWANISISTEPW*TPRINH
Trigger: ATGGTTAATTCTGGGTGTGCACCAGGGTTCAGTAGA...GATTGAAATGTTCGCCCAGGGGTCTCCAGCAACTTTGGAAATCTCTTTGTATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp CAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTTTTAGGCTTTCGAGTTaGACTGACCGTGATTGGGAA +
Preference number: 4 (lower is better)
Translates to: QNLAKVVHDEGKMQQGLSFRLSS*TDRDWE
Trigger: TTCCCAATCACGGTCAGTGCAACTCGAAAGCCTAAA...AGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS-3UTR GCA 90 bp ACAGCTCTAAACACACACACTGACGATGGGTTTGGAACATGGCAGCATTTACATGAGACTGTCTTCTTATaGTATAGAATGGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: TALNTHTDDGFGTWQHLHETVFL*YRMGRR
Trigger: TCTCCTGCCCATTCTATAGCATAAGAAGACAGTCTC...ATGTAAATGCTGCCATGTTCCAAACCCATCGTCAGTGTGTGTGTTTAGAGCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440973.5
CDS-3UTR GCA 90 bp AACTCTTGGGGACTTTTGAAGATAATGACGAGCATCCGCAGATGCTCTAAGGTTCCATGGTCATGTAACTaGCTCAAAACAAAATGTCCC +
Preference number: 4 (lower is better)
Translates to: NSWGLLKIMTSIRRCSKVPWSCN*LKTKCP
Trigger: GGGACATTTTGTTTTGAGGCAGTTACATGACCATGG...AACCTTAGAGCATCTGCGGATGCTCGTCATTATCTTCAAAAGTCCCCAAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR GCA 90 bp AAAGGCATGGGCTATGGCTTGGTTAAACATATCTGCAAGGTTACTAGGGAAATCTTTACTTGTCGTCGCTaGTGGATAGAGGCTGAGTTT +
Preference number: 4 (lower is better)
Translates to: KGMGYGLVKHICKVTREIFTCRR*WIEAEF
Trigger: AAACTCAGCCTCTATCCAGCAGCGACGACAAGTAAA...GATTTCCCTAGTAACCTTGCAGATATGTTTAACCAAGCCATAGCCCATGCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443427.5
CDS-3UTR CCA 90 bp GACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATTCCCCATCATCTCTCTaGCGCTTGTGTTTCAACATT +
Preference number: 4 (lower is better)
Translates to: DRIWLKWCMMRVKCSRDYSPSSL*RLCFNI
Trigger: AATGTTGAAACACAAGCGCCAGAGAGATGATGGGGA...ATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp CTGCTACAGTCATATAAAAGCTTTAAGGTGTACCACTTTCATAAAAGGATGCATGATCATGAGCGGGCTTaGCCAAAGGTTGGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: LLQSYKSFKVYHFHKRMHDHERA*PKVGSS
Trigger: AGAGCTGCCAACCTTTGGCCAAGCCCGCTCATGATC...ATGCATCCTTTTATGAAAGTGGTACACCTTAAAGCTTTTATATGACTGTAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TATGGTTGCCTTTTGAGCTACTGTATGACTCTATTTGCCTTTCACATAACTAGCGCCTTGGAATCCCTTTaGCTGTTCCCAACAGAAGAC +
Preference number: 4 (lower is better)
Translates to: YGCLLSYCMTLFAFHITSALESL*LFPTED
Trigger: GTCTTCTGTTGGGAACAGCCAAAGGGATTCCAAGGC...GCTAGTTATGTGAAAGGCAAATAGAGTCATACAGTAGCTCAAAAGGCAACCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp AATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAAGACTCTACTGAACCCTaGTGCACACCCAGAATTAAC +
Preference number: 4 (lower is better)
Translates to: NLAKVVHDEGKMQQGLSEDSTEP*CTPRIN
Trigger: GTTAATTCTGGGTGTGCACCAGGGTTCAGTAGAGTC...TTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TATGGTTGCCTTTTGAGCTACTGTATGACTCTATTTGCCTTTCACATAACTAGCGAGCTAGTTGATTTGTaGTCTCCAGGGCAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: YGCLLSYCMTLFAFHITSELVDL*SPGQKW
Trigger: CCACTTCTGCCCTGGAGACCACAAATCAACTAGCTC...GCTAGTTATGTGAAAGGCAAATAGAGTCATACAGTAGCTCAAAAGGCAACCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp AGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTAGCATGGGCTATGGCTTaGTTAAACATATCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: RQNLAKVVHDEGKMQQGLAWAMA*LNISAR
Trigger: CCTTGCAGATATGTTTAACCAAGCCATAGCCCATGC...TAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp CAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTTCCAGAAATGTTCCATaGGCTTGTAGAAGTCAAGGG +
Preference number: 4 (lower is better)
Translates to: QNLAKVVHDEGKMQQGLSSRNVP*ACRSQG
Trigger: CCCTTGACTTCTACAAGCCCATGGAACATTTCTGGA...AGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338799.9
3UTR CAA 72 bp GTTATAACTCATCTAGCTACAGGTGTTGAGTGTTGGTaGCCAGGGCATATTTTAAAGTCAGGGGAAGGATGT +
Preference number: 4 (lower is better)
Translates to: VITHLATGVECW*PGHILKSGEGC
Trigger: ACATCCTTCCCCTGACTTTAAAATATGCCCTGGCAACCAACACTCAACACCTGTAGCTAGATGAGTTATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR TCA 90 bp TGTACCACTTTCATAAAAGGATGCATTGCCATAGGAATACAAGAGGGTGCTATAGTAAATGGAGCTAGTTaGTTTGTGGTCTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: CTTFIKGCIAIGIQEGAIVNGAS*FVVSRA
Trigger: TGCCCTGGAGACCACAAATCAACTAGCTCCATTTAC...TATAGCACCCTCTTGTATTCCTATGGCAATGCATCCTTTTATGAAAGTGGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp ACAGCTCTAAACACACACACTGACGATGGGTTTGGAACATGGCAGCATTTACATAGTCTCTATAACCAATaGCCTCTCTGTGAATGCAAA +
Preference number: 4 (lower is better)
Translates to: TALNTHTDDGFGTWQHLHSLYNQ*PLCECK
Trigger: TTTGCATTCACAGAGAGGTCATTGGTTATAGAGACT...ATGTAAATGCTGCCATGTTCCAAACCCATCGTCAGTGTGTGTGTTTAGAGCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp CAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTACAAGAGCTCTACACTaGAGAGTATGTAGTGCACAA +
Preference number: 4 (lower is better)
Translates to: QNLAKVVHDEGKMQQGLSTRALH*RVCSAQ
Trigger: TTGTGCACTACATACTCTTCAGTGTAGAGCTCTTGT...AGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp TCTTTGGTTCCCAAATATTGCGTCTATCTGCTCTCCGCATTGTTTCAGACAGCCGGCTGTCATGATTTATaGTTCAATGGTTTGCCATTT +
Preference number: 4 (lower is better)
Translates to: SLVPKYCVYLLSALFQTAGCHDL*FNGLPF
Trigger: AAATGGCAAACCATTGAATCATAAATCATGACAGCC...GGCTGTCTGAAACAATGCGGAGAGCAGATAGACGCAATATTTGGGAACCAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR TCA 90 bp ATTCCTTCGAGGATACCAGAGATCAGTTCTTTGGTTGATACAAATGATAGTGACACCTGGGTCCTAACTTaGTTCTGGAAACTTGTCTCC +
Preference number: 4 (lower is better)
Translates to: IPSRIPEISSLVDTNDSDTWVLT*FWKLVS
Trigger: GGAGACAAGTTTCCAGAATCAAGTTAGGACCCAGGT...GTCACTATCATTTGTATCAACCAAAGAACTGATCTCTGGTATCCTCGAAGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR TCA 90 bp AACTCTTGGGGACTTTTGAAGATAATGACGAGCATCCGCAGATGCTCTAAGGTTGATGCCAATAGGTACTaGACACCTACTAAATTTAGG +
Preference number: 4 (lower is better)
Translates to: NSWGLLKIMTSIRRCSKVDANRY*TPTKFR
Trigger: CCTAAATTTAGTAGGTGTTCAGTACCTATTGGCATC...AACCTTAGAGCATCTGCGGATGCTCGTCATTATCTTCAAAAGTCCCCAAGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR GCA 90 bp CCTACATATGAATTGATGCCAATAGGTACTGAACACCTACTAAATTTAGGCCCTCTGAAGCATAGTCATTaGACACTGCACAGTAGCGAG +
Preference number: 4 (lower is better)
Translates to: PTYELMPIGTEHLLNLGPLKHSH*TLHSSE
Trigger: CTCGCTACTGTGCAGTGTGCAATGACTATGCTTCAG...AGGGCCTAAATTTAGTAGGTGTTCAGTACCTATTGGCATCAATTCATATGTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR GCA 90 bp CTGGCCTTCAGTTTTCTCATTTGCAAAGATGAGGGGTGCATTAATATCCTAAAACGAAGATCTCCACCATaGCCTCTACACATTTTCCCT +
Preference number: 4 (lower is better)
Translates to: LAFSFLICKDEGCINILKRRSPP*PLHIFP
Trigger: AGGGAAAATGTGTAGAGGGCATGGTGGAGATCTTCG...TTTTAGGATATTAATGCACCCCTCATCTTTGCAAATGAGAAAACTGAAGGCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR GCA 90 bp AAAGGCATGGGCTATGGCTTGGTTAAACATATCTGCAAGGTTACTAGGGAAATCTTCATGCTGTACAGATaGTCCATGCCTTTGTTACTC +
Preference number: 4 (lower is better)
Translates to: KGMGYGLVKHICKVTREIFMLYR*SMPLLL
Trigger: GAGTAACAAAGGCATGGAGCATCTGTACAGCATGAA...GATTTCCCTAGTAACCTTGCAGATATGTTTAACCAAGCCATAGCCCATGCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TTCAATACTCTTCTTAATATATTTGCCATTCCCCAGATTCCTGAATCCACTTCCGGGGCACCACGTTCTTaGACTTCATGCTGTACAGAT +
Preference number: 4 (lower is better)
Translates to: FNTLLNIFAIPQIPESTSGAPRS*TSCCTD
Trigger: ATCTGTACAGCATGAAGTGCAAGAACGTGGTGCCCC...GGAAGTGGATTCAGGAATCTGGGGAATGGCAAATATATTAAGAAGAGTATTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TTTCATAAAAGGATGCATTGCCATAGGAATACAAGAGGGTGCTATAATAAACCCAAGATCCAAGTACAGTaGCCACTGGAACAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: FHKRMHCHRNTRGCYNKPKIQVQ*PLEQVL
Trigger: CAGGACCTGTTCCAGTGGGCACTGTACTTGGATCTT...GGGTTTATTATAGCACCCTCTTGTATTCCTATGGCAATGCATCCTTTTATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp CTTTCCCTCTTGTTCTCTAGTAGCCACAACAATCCTGCACAAGTACTGTTCAGCAATCAAATCAAAGACTaGACTTCCTTAGGGGTTAGA +
Preference number: 4 (lower is better)
Translates to: LSLLFSSSHNNPAQVLFSNQIKD*TSLGVR
Trigger: TCTAACCCCTAAGGAAGTGCAGTCTTTGATTTGATT...GCTGAACAGTACTTGTGCAGGATTGTTGTGGCTACTAGAGAACAAGAGGGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp CTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGCAATTGGAAAGGAAATaGAGTTGGAAACAGAGCATA +
Preference number: 4 (lower is better)
Translates to: LKWCMMRVKCSRDYLNRVQLERK*SWKQSI
Trigger: TATGCTCTGTTTCCAACTGCATTTCCTTTCCAATTG...CACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TATGGTTGCCTTTTGAGCTACTGTATGACTCTATTTGCCTTTCACATAACTAGCTGTGTCTCAGGCACCTaGTCATGGGACAATATGTTG +
Preference number: 4 (lower is better)
Translates to: YGCLLSYCMTLFAFHITSCVSGT*SWDNML
Trigger: CAACATATTGTCCCATGAGCAGGTGCCTGAGACACA...GCTAGTTATGTGAAAGGCAAATAGAGTCATACAGTAGCTCAAAAGGCAACCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GTTTCTGCCCTACTTTCCCTCTTGTTCTCTAGTAGCCACAACAATCCTGCACAAACATCAGTAATAGTATaGATCGGCAAAAGGGCATAT +
Preference number: 4 (lower is better)
Translates to: VSALLSLLFSSSHNNPAQTSVIV*IGKRAY
Trigger: ATATGCCCTTTTGCCGATGCATACTATTACTGATGT...TTGTGCAGGATTGTTGTGGCTACTAGAGAACAAGAGGGAAAGTAGGGCAGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp CTGCTACAGTCATATAAAAGCTTTAAGGTGTACCACTTTCATAAAAGGATGCATGCCTTATGTGCCCCGTaGCAGACTCCGATATATCTC +
Preference number: 4 (lower is better)
Translates to: LLQSYKSFKVYHFHKRMHALCAP*QTPIYL
Trigger: GAGATATATCGGAGTCTGGCACGGGGCACATAAGGC...ATGCATCCTTTTATGAAAGTGGTACACCTTAAAGCTTTTATATGACTGTAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443427.5
CDS-3UTR CCA 90 bp AATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAATCTACACATTTTCCCTaGTTCCTGTCCAAGAGCAAG +
Preference number: 4 (lower is better)
Translates to: NLAKVVHDEGKMQQGLSESTHFP*FLSKSK
Trigger: CTTGCTCTTGGACAGGAACCAGGGAAAATGTGTAGA...TTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp CTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGAGAATTTGGCTAAAGTaGTGCATGATGAGGGTAAAA +
Preference number: 4 (lower is better)
Translates to: LKWCMMRVKCSRDYLNRVRIWLK*CMMRVK
Trigger: TTTTACCCTCATCATGCACCACTTTAGCCAAATTCT...CACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp GCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTAGAATTTGGCTAAAGTaGTGCATGATGAGGGTAAAA +
Preference number: 4 (lower is better)
Translates to: AKVVHDEGKMQQGLSEPCRIWLK*CMMRVK
Trigger: TTTTACCCTCATCATGCACCACTTTAGCCAAATTCT...ACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TTCAATACTCTTCTTAATATATTTGCCATTCCCCAGATTCCTGAATCCACTTCCGTTGCTGGAGACCCCTaGGCGAACATTTCAATCATC +
Preference number: 4 (lower is better)
Translates to: FNTLLNIFAIPQIPESTSVAGDP*ANISII
Trigger: GATGATTGAAATGTTCGCCCAGGGGTCTCCAGCAAC...GGAAGTGGATTCAGGAATCTGGGGAATGGCAAATATATTAAGAAGAGTATTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TCTACTGAACCCTGGTGCACACCCAGAATTAACCATTTTCCTCCAAATACTTTCAGTACTCTAAGCCAGTaGCCTAAATCAATGGCCATT +
Preference number: 4 (lower is better)
Translates to: STEPWCTPRINHFPPNTFSTLSQ*PKSMAI
Trigger: AATGGCCATTGATTTAGGCCACTGGCTTAGAGTACT...GAAAGTATTTGGAGGAAAATGGTTAATTCTGGGTGTGCACCAGGGTTCAGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp GGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATACGCTACTGAAAAGATaGATATTTGGGACCAAAGTT +
Preference number: 4 (lower is better)
Translates to: GDRIWLKWCMMRVKCSRDTLLKR*IFGTKV
Trigger: AACTTTGGTCCCAAATATCCATCTTTTCAGTAGCGT...ATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp ATTCCTTCGAGGATACCAGAGATCAGTTCTTTGGTTGATACAAATGATAGTGACATTGAAGTCACAAAGTaGTCTCCTGTGTCCTGGACC +
Preference number: 4 (lower is better)
Translates to: IPSRIPEISSLVDTNDSDIEVTK*SPVSWT
Trigger: GGTCCAGGACACAGGAGACCACTTTGTGACTTCAAT...GTCACTATCATTTGTATCAACCAAAGAACTGATCTCTGGTATCCTCGAAGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CCA 90 bp CACTCTTTGGTTCCCAAATATTGCGTCTATCTGCTCTCCGCATTGTTTCAGACATTGATCCAAAGTTTGTaGGTAGCTATCCTATCCTTC +
Preference number: 4 (lower is better)
Translates to: HSLVPKYCVYLLSALFQTLIQSL*VAILSF
Trigger: GAAGGATAGGATAGCTACCCACAAACTTTGGATCAA...TGTCTGAAACAATGCGGAGAGCAGATAGACGCAATATTTGGGAACCAAAGAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CCA 90 bp AACTCTTGGGGACTTTTGAAGATAATGACGAGCATCCGCAGATGCTCTAAGGTTGAGTCGGCACACCCTTaGTATCATTATACAGATAAT +
Preference number: 4 (lower is better)
Translates to: NSWGLLKIMTSIRRCSKVESAHP*YHYTDN
Trigger: ATTATCTGTATAATGATACCAAGGGTGTGCCGACTC...AACCTTAGAGCATCTGCGGATGCTCGTCATTATCTTCAAAAGTCCCCAAGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CCA 90 bp CTGGCCTTCAGTTTTCTCATTTGCAAAGATGAGGGGTGCATTAATATCCTAAAAGGCACCTTAGGTCTCTaGCACCTTCTTTACAGAGAA +
Preference number: 4 (lower is better)
Translates to: LAFSFLICKDEGCINILKGTLGL*HLLYRE
Trigger: TTCTCTGTAAAGAAGGTGCCAGAGACCTAAGGTGCC...TTTTAGGATATTAATGCACCCCTCATCTTTGCAAATGAGAAAACTGAAGGCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CCA 90 bp ACAGTTGACAAACAGGAGCTATTCAGCTCTGTCAGATTGTACTATCAATTATATACAGGGCTTTGCAGCTaGGACAGCCACATTCTCACT +
Preference number: 4 (lower is better)
Translates to: TVDKQELFSSVRLYYQLYTGLCS*DSHILT
Trigger: AGTGAGAATGTGGCTGTCCCAGCTGCAAAGCCCTGT...ATATAATTGATAGTACAATCTGACAGAGCTGAATAGCTCCTGTTTGTCAACTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CCA 90 bp TTTCATAAAAGGATGCATTGCCATAGGAATACAAGAGGGTGCTATAATAAACCCACTTGTCGTCGCTGCTaGATAGAGGCTGAGTTTCAC +
Preference number: 4 (lower is better)
Translates to: FHKRMHCHRNTRGCYNKPTCRRC*IEAEFH
Trigger: GTGAAACTCAGCCTCTATCCAGCAGCGACGACAAGT...GGGTTTATTATAGCACCCTCTTGTATTCCTATGGCAATGCATCCTTTTATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443427.5
3UTR CAA 72 bp TTATTTGTTCAGCCCTCAAAAGGCATGGGCTATGGCTaGGTTAAACATATCTGCAAGGTTACTAGGGAAATC +
Preference number: 4 (lower is better)
Translates to: LFVQPSKGMGYG*VKHICKVTREI
Trigger: GATTTCCCTAGTAACCTTGCAGATATGTTTAACCAAGCCATAGCCCATGCCTTTTGAGGGCTGAACAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR CAA 72 bp CCCAAGACCTGCACCAAAGAGAATTATGGTTGCCTTTaGAGCTACTGTATGACTCTATTTGCCTTTCACATA +
Preference number: 4 (lower is better)
Translates to: PKTCTKENYGCL*SYCMTLFAFHI
Trigger: TATGTGAAAGGCAAATAGAGTCATACAGTAGCTCAAAAGGCAACCATAATTCTCTTTGGTGCAGGTCTTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp TTTCATAAAAGGATGCATTGCCATAGGAATACAAGAGGGTGCTATAATAAACCCCTGGCGTCGATTATCTaGATTTGGCCTGTAGAATGC +
Preference number: 4 (lower is better)
Translates to: FHKRMHCHRNTRGCYNKPLASII*IWPVEC
Trigger: GCATTCTACAGGCCAAATTCAGATAATCGACGCCAG...GGGTTTATTATAGCACCCTCTTGTATTCCTATGGCAATGCATCCTTTTATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp ACAGTTGACAAACAGGAGCTATTCAGCTCTGTCAGATTGTACTATCAATTATATTCTAGAAGGTGGACCTaGTCATGGAGGGTCAAATCC +
Preference number: 4 (lower is better)
Translates to: TVDKQELFSSVRLYYQLYSRRWT*SWRVKS
Trigger: GGATTTGACCCTCCATGATCAGGTCCACCTTCTAGA...ATATAATTGATAGTACAATCTGACAGAGCTGAATAGCTCCTGTTTGTCAACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR TCA 90 bp ACAGTTGACAAACAGGAGCTATTCAGCTCTGTCAGATTGTACTATCAATTATATTTTGGCCTTCGCCATTaGAGTCACAAAGTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: TVDKQELFSSVRLYYQLYFGLRH*SHKVVS
Trigger: GGAGACCACTTTGTGACTTCAATGGCGAAGGCCAAA...ATATAATTGATAGTACAATCTGACAGAGCTGAATAGCTCCTGTTTGTCAACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR GCA 90 bp TTTCATAAAAGGATGCATTGCCATAGGAATACAAGAGGGTGCTATAATAAACCCCTGAAGCATAGTCATTaGACACTGCACAGTAGCGAG +
Preference number: 4 (lower is better)
Translates to: FHKRMHCHRNTRGCYNKPLKHSH*TLHSSE
Trigger: CTCGCTACTGTGCAGTGTGCAATGACTATGCTTCAG...GGGTTTATTATAGCACCCTCTTGTATTCCTATGGCAATGCATCCTTTTATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp AAAGGCATGGGCTATGGCTTGGTTAAACATATCTGCAAGGTTACTAGGGAAATCATGATGAGGGTAAAATaGAGCAGGGATTATCTGAAC +
Preference number: 4 (lower is better)
Translates to: KGMGYGLVKHICKVTREIMMRVK*SRDYLN
Trigger: GTTCAGATAATCCCTGCTGCATTTTACCCTCATCAT...GATTTCCCTAGTAACCTTGCAGATATGTTTAACCAAGCCATAGCCCATGCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp AAATACAAAGAGATTTCCAAAGTTGCTGGAGACCCCTGGGCGAACATTTCAATCATTTGGCTAAAGTGGTaGATGATGAGGGTAAAATGC +
Preference number: 4 (lower is better)
Translates to: KYKEISKVAGDPWANISIIWLKW*MMRVKC
Trigger: GCATTTTACCCTCATCATGCACCACTTTAGCCAAAT...GATTGAAATGTTCGCCCAGGGGTCTCCAGCAACTTTGGAAATCTCTTTGTATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp AGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGAAATCACCAGATACTCTaGTACAGTCATATAAAAGCT +
Preference number: 4 (lower is better)
Translates to: RRQNLAKVVHDEGKMQQGNHQIL*YSHIKA
Trigger: AGCTTTTATATGACTGTAGCAGAGTATCTGGTGATT...TCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp CATATAAAAGCTTTAAGGTGTACCACTTTCATAAAAGGATGCATTGCCATAGGATCTGCCTTCCCTGTGTaGCCCTTGTATTCCTATAGG +
Preference number: 4 (lower is better)
Translates to: HIKALRCTTFIKGCIAIGSAFPV*PLYSYR
Trigger: CCTATAGGAATACAAGGGGCACACAGGGAAGGCAGA...TCCTATGGCAATGCATCCTTTTATGAAAGTGGTACACCTTAAAGCTTTTATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp CATATAAAAGCTTTAAGGTGTACCACTTTCATAAAAGGATGCATTGCCATAGGATACTGTTCAGCTCCATaGCCCAGGGCTAAATGCAAC +
Preference number: 4 (lower is better)
Translates to: HIKALRCTTFIKGCIAIGYCSAP*PRAKCN
Trigger: GTTGCATTTAGCCCTGGGGCATGGAGCTGAACAGTA...TCCTATGGCAATGCATCCTTTTATGAAAGTGGTACACCTTAAAGCTTTTATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TGTACCACTTTCATAAAAGGATGCATTGCCATAGGAATACAAGAGGGTGCTATATCTACTGAACCCTGGTaGACACCCAGAATTAACCAT +
Preference number: 4 (lower is better)
Translates to: CTTFIKGCIAIGIQEGAISTEPW*TPRINH
Trigger: ATGGTTAATTCTGGGTGTGCACCAGGGTTCAGTAGA...TATAGCACCCTCTTGTATTCCTATGGCAATGCATCCTTTTATGAAAGTGGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp CTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGAAAGAGAATTATGGTTaGCTTTTGAGCTACTGTATG +
Preference number: 4 (lower is better)
Translates to: LKWCMMRVKCSRDYLNRVKENYG*LLSYCM
Trigger: CATACAGTAGCTCAAAAGGCAACCATAATTCTCTTT...CACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp CTGGCCTTCAGTTTTCTCATTTGCAAAGATGAGGGGTGCATTAATATCCTAAAAGAGTCATACCCTATGTaGATGGCATTCAGACTTCTC +
Preference number: 4 (lower is better)
Translates to: LAFSFLICKDEGCINILKESYPM*MAFRLL
Trigger: GAGAAGTCTGAATGCCATGCACATAGGGTATGACTC...TTTTAGGATATTAATGCACCCCTCATCTTTGCAAATGAGAAAACTGAAGGCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR GCA 90 bp CTGGCCTTCAGTTTTCTCATTTGCAAAGATGAGGGGTGCATTAATATCCTAAAATTGGTTCCCAAATATTaGGTCTATCTGCTCTCCGCA +
Preference number: 4 (lower is better)
Translates to: LAFSFLICKDEGCINILKLVPKY*VYLLSA
Trigger: TGCGGAGAGCAGATAGACGCAATATTTGGGAACCAA...TTTTAGGATATTAATGCACCCCTCATCTTTGCAAATGAGAAAACTGAAGGCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CCA 90 bp TCCTTCAACAGACTCCAACATAGGAGTCCACATTCTGTAAATGGTGACATTTTTTCCTGTTTTTATCAATaGTGCACTGGTTGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: SFNRLQHRSPHSVNGDIFSCFYQ*CTGWWL
Trigger: CAGCCACCAACCAGTGCACCATTGATAAAAACAGGA...AAAAATGTCACCATTTACAGAATGTGGACTCCTATGTTGGAGTCTGTTGAAGGA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CCA 90 bp TATGGTTGCCTTTTGAGCTACTGTATGACTCTATTTGCCTTTCACATAACTAGCTCCCCATCATCTCTCTaGCGCTTGTGTTTCAACATT +
Preference number: 4 (lower is better)
Translates to: YGCLLSYCMTLFAFHITSSPSSL*RLCFNI
Trigger: AATGTTGAAACACAAGCGCCAGAGAGATGATGGGGA...GCTAGTTATGTGAAAGGCAAATAGAGTCATACAGTAGCTCAAAAGGCAACCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp AGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGAGAAAGGAAATGCAGTTaGAAACAGAGCATAATTAAC +
Preference number: 4 (lower is better)
Translates to: RRQNLAKVVHDEGKMQQGERKCS*KQSIIN
Trigger: GTTAATTATGCTCTGTTTCCAACTGCATTTCCTTTC...TCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp CTGGCCTTCAGTTTTCTCATTTGCAAAGATGAGGGGTGCATTAATATCCTAAAAGGGCAGCTATTTACCTaGAAATTTGAAGGAGTGAGG +
Preference number: 4 (lower is better)
Translates to: LAFSFLICKDEGCINILKGQLFT*KFEGVR
Trigger: CCTCACTCCTTCAAATTTCCAGGTAAATAGCTGCCC...TTTTAGGATATTAATGCACCCCTCATCTTTGCAAATGAGAAAACTGAAGGCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR TCA 90 bp ATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACAAGCAGATCTGCCTGTaGATATTAGACATTACTATG +
Preference number: 4 (lower is better)
Translates to: IWLKWCMMRVKCSRDYLNKQICL*ILDITM
Trigger: CATAGTAATGTCTAATATTCACAGGCAGATCTGCTT...GTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp AATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAAAGTCTCTATAACCAATaGCCTCTCTGTGAATGCAAA +
Preference number: 4 (lower is better)
Translates to: NLAKVVHDEGKMQQGLSESLYNQ*PLCECK
Trigger: TTTGCATTCACAGAGAGGTCATTGGTTATAGAGACT...TTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp AGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGACACAATTTGGCATTTaGGCCTTTTCCCATAAAACA +
Preference number: 4 (lower is better)
Translates to: RIWLKWCMMRVKCSRDYLTQFGI*AFSHKT
Trigger: TGTTTTATGGGAAAAGGCTCAAATGCCAAATTGTGT...CAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp ACAGTTGACAAACAGGAGCTATTCAGCTCTGTCAGATTGTACTATCAATTATATAAGACCAGAGGAGAATaGCCAGTGGGTAGTCAACAA +
Preference number: 4 (lower is better)
Translates to: TVDKQELFSSVRLYYQLYKTRGE*PVGSQQ
Trigger: TTGTTGACTACCCACTGGTCATTCTCCTCTGGTCTT...ATATAATTGATAGTACAATCTGACAGAGCTGAATAGCTCCTGTTTGTCAACTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR TCA 90 bp CCTACATATGAATTGATGCCAATAGGTACTGAACACCTACTAAATTTAGGCCCTGGTGTTCCTTTACATTaGGACTTGAGATATCTCGTG +
Preference number: 4 (lower is better)
Translates to: PTYELMPIGTEHLLNLGPGVPLH*DLRYLV
Trigger: CACGAGATATCTCAAGTCTCAATGTAAAGGAACACC...AGGGCCTAAATTTAGTAGGTGTTCAGTACCTATTGGCATCAATTCATATGTAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR TCA 90 bp ACAGTTGACAAACAGGAGCTATTCAGCTCTGTCAGATTGTACTATCAATTATATCAGACAGGTTGTGGTTaGACATTCTTGGGCTTCGTT +
Preference number: 4 (lower is better)
Translates to: TVDKQELFSSVRLYYQLYQTGCG*TFLGFV
Trigger: AACGAAGCCCAAGAATGTTCAACCACAACCTGTCTG...ATATAATTGATAGTACAATCTGACAGAGCTGAATAGCTCCTGTTTGTCAACTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR GCA 90 bp CATATAAAAGCTTTAAGGTGTACCACTTTCATAAAAGGATGCATTGCCATAGGACCTTTGTTACTCATGTaGCTGATGTGGGAGAGGATG +
Preference number: 4 (lower is better)
Translates to: HIKALRCTTFIKGCIAIGPLLLM*LMWERM
Trigger: CATCCTCTCCCACATCAGGCACATGAGTAACAAAGG...TCCTATGGCAATGCATCCTTTTATGAAAGTGGTACACCTTAAAGCTTTTATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp AATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAAATGATGAGGGTAAAATaGAGCAGGGATTATCTGAAC +
Preference number: 4 (lower is better)
Translates to: NLAKVVHDEGKMQQGLSEMMRVK*SRDYLN
Trigger: GTTCAGATAATCCCTGCTGCATTTTACCCTCATCAT...TTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp ATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACAATCAAATCAAAGACTaGACTTCCTTAGGGGTTAGA +
Preference number: 4 (lower is better)
Translates to: IWLKWCMMRVKCSRDYLNNQIKD*TSLGVR
Trigger: TCTAACCCCTAAGGAAGTGCAGTCTTTGATTTGATT...GTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATAGTGCAAAATTGAAGTaGCATAATAGAGGCAGCAAT +
Preference number: 4 (lower is better)
Translates to: DRIWLKWCMMRVKCSRDYSAKLK*HNRGSN
Trigger: ATTGCTGCCTCTATTATGGCACTTCAATTTTGCACT...ATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp AAATACAAAGAGATTTCCAAAGTTGCTGGAGACCCCTGGGCGAACATTTCAATCAGTGCAAAATTGAAGTaGCATAATAGAGGCAGCAAT +
Preference number: 4 (lower is better)
Translates to: KYKEISKVAGDPWANISISAKLK*HNRGSN
Trigger: ATTGCTGCCTCTATTATGGCACTTCAATTTTGCACT...GATTGAAATGTTCGCCCAGGGGTCTCCAGCAACTTTGGAAATCTCTTTGTATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TGTACCACTTTCATAAAAGGATGCATTGCCATAGGAATACAAGAGGGTGCTATAATGTTGTTTCTAGGGTaGACAGCTCTAAACACACAC +
Preference number: 4 (lower is better)
Translates to: CTTFIKGCIAIGIQEGAIMLFLG*TALNTH
Trigger: GTGTGTGTTTAGAGCTGTGCACCCTAGAAACAACAT...TATAGCACCCTCTTGTATTCCTATGGCAATGCATCCTTTTATGAAAGTGGTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATGTGAAGAGATCTTTGTaGTTACTCCTTCCTAGTTTT +
Preference number: 4 (lower is better)
Translates to: DRIWLKWCMMRVKCSRDYVKRSL*LLLPSF
Trigger: AAAACTAGGAAGGAGTAAGCACAAAGATCTCTTCAC...ATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440973.5
CDS-3UTR CCA 90 bp TTCAATACTCTTCTTAATATATTTGCCATTCCCCAGATTCCTGAATCCACTTCCCTTTCTCTGCCACCCTaGCGTCGATTATCTGAATTT +
Preference number: 4 (lower is better)
Translates to: FNTLLNIFAIPQIPESTSLSLPP*RRLSEF
Trigger: AAATTCAGATAATCGACGCCAGGGTGGCAGAGAAAG...GGAAGTGGATTCAGGAATCTGGGGAATGGCAAATATATTAAGAAGAGTATTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TTTCATAAAAGGATGCATTGCCATAGGAATACAAGAGGGTGCTATAATAAACCCTCCTGTTTTTATCAATaGTGCACTGGTTGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: FHKRMHCHRNTRGCYNKPSCFYQ*CTGWWL
Trigger: CAGCCACCAACCAGTGCACCATTGATAAAAACAGGA...GGGTTTATTATAGCACCCTCTTGTATTCCTATGGCAATGCATCCTTTTATGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TTCAATACTCTTCTTAATATATTTGCCATTCCCCAGATTCCTGAATCCACTTCCTCCCCATCATCTCTCTaGCGCTTGTGTTTCAACATT +
Preference number: 4 (lower is better)
Translates to: FNTLLNIFAIPQIPESTSSPSSL*RLCFNI
Trigger: AATGTTGAAACACAAGCGCCAGAGAGATGATGGGGA...GGAAGTGGATTCAGGAATCTGGGGAATGGCAAATATATTAAGAAGAGTATTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TTCAATACTCTTCTTAATATATTTGCCATTCCCCAGATTCCTGAATCCACTTCCTCTACACATTTTCCCTaGTTCCTGTCCAAGAGCAAG +
Preference number: 4 (lower is better)
Translates to: FNTLLNIFAIPQIPESTSSTHFP*FLSKSK
Trigger: CTTGCTCTTGGACAGGAACCAGGGAAAATGTGTAGA...GGAAGTGGATTCAGGAATCTGGGGAATGGCAAATATATTAAGAAGAGTATTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp CTGCTACAGTCATATAAAAGCTTTAAGGTGTACCACTTTCATAAAAGGATGCATGACTCTACTGAACCCTaGTGCACACCCAGAATTAAC +
Preference number: 4 (lower is better)
Translates to: LLQSYKSFKVYHFHKRMHDSTEP*CTPRIN
Trigger: GTTAATTCTGGGTGTGCACCAGGGTTCAGTAGAGTC...ATGCATCCTTTTATGAAAGTGGTACACCTTAAAGCTTTTATATGACTGTAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp CCTACATATGAATTGATGCCAATAGGTACTGAACACCTACTAAATTTAGGCCCTCATACCCTATGTGCATaGCATTCAGACTTCTCACAA +
Preference number: 4 (lower is better)
Translates to: PTYELMPIGTEHLLNLGPHTLCA*HSDFSQ
Trigger: TTGTGAGAAGTCTGAATGCCATGCACATAGGGTATG...AGGGCCTAAATTTAGTAGGTGTTCAGTACCTATTGGCATCAATTCATATGTAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CCA 90 bp CCTAACTTGATTCTGGAAACTTGTCTCCTGAACCATATATCCAGGAAACACTGGACTTTGCTACTCAGGTaGGACTGGAACATAAATAAT +
Preference number: 4 (lower is better)
Translates to: PNLILETCLLNHISRKHWTLLLR*DWNINN
Trigger: ATTATTTATGTTCCAGTCCCACCTGAGTAGCAAAGT...CCAGTGTTTCCTGGATATATGGTTCAGGAGACAAGTTTCCAGAATCAAGTTAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CCA 90 bp CTGGCCTTCAGTTTTCTCATTTGCAAAGATGAGGGGTGCATTAATATCCTAAAAACAGCAGTCACTCTTTaGTTCCCAAATATTGCGTCT +
Preference number: 4 (lower is better)
Translates to: LAFSFLICKDEGCINILKTAVTL*FPNIAS
Trigger: AGACGCAATATTTGGGAACCAAAGAGTGACTGCTGT...TTTTAGGATATTAATGCACCCCTCATCTTTGCAAATGAGAAAACTGAAGGCCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CCA 90 bp AACTCTTGGGGACTTTTGAAGATAATGACGAGCATCCGCAGATGCTCTAAGGTTCAGAGATCAGTTCTTTaGTTGATACAAATGATAGTG +
Preference number: 4 (lower is better)
Translates to: NSWGLLKIMTSIRRCSKVQRSVL*LIQMIV
Trigger: CACTATCATTTGTATCAACCAAAGAACTGATCTCTG...AACCTTAGAGCATCTGCGGATGCTCGTCATTATCTTCAAAAGTCCCCAAGAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR CAA 72 bp TTAGATTTTGCAACCTACATTGATAGGGTCTTCTCTTaGGATGACCTAGCCTCTCATAATTGCTGCATGATG +
Preference number: 4 (lower is better)
Translates to: LDFATYIDRVFS*DDLASHNCCMM
Trigger: CATCATGCAGCAATTATGAGAGGCTAGGTCATCCAAAGAGAAGACCCTATCAATGTAGGTTGCAAAATCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
3UTR CAA 72 bp AGATGGATATTTGGGACCAAAGTTCATTTGCTCCAGTaGAGAGTAAGTTTTCAGGGGATTAACTTGGGAATG +
Preference number: 4 (lower is better)
Translates to: RWIFGTKVHLLQ*RVSFQGINLGM
Trigger: CATTCCCAAGTTAATCCCCTGAAAACTTACTCTCAACTGGAGCAAATGAACTTTGGTCCCAAATATCCATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp TTCAATACTCTTCTTAATATATTTGCCATTCCCCAGATTCCTGAATCCACTTCCGCTATAATAAACCCTTaGCCTAGCTTTCTCCAAGTC +
Preference number: 4 (lower is better)
Translates to: FNTLLNIFAIPQIPESTSAIINP*PSFLQV
Trigger: GACTTGGAGAAAGCTAGGTCAAGGGTTTATTATAGC...GGAAGTGGATTCAGGAATCTGGGGAATGGCAAATATATTAAGAAGAGTATTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp TATGGTTGCCTTTTGAGCTACTGTATGACTCTATTTGCCTTTCACATAACTAGCCCCCAAACCAAACCCTaGTTTTGGATTATCTCTAAA +
Preference number: 4 (lower is better)
Translates to: YGCLLSYCMTLFAFHITSPQTKP*FWIISK
Trigger: TTTAGAGATAATCCAAAATCAGGGTTTGGTTTGGGG...GCTAGTTATGTGAAAGGCAAATAGAGTCATACAGTAGCTCAAAAGGCAACCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TGTACCACTTTCATAAAAGGATGCATTGCCATAGGAATACAAGAGGGTGCTATAATGATGAGGGTAAAATaGAGCAGGGATTATCTGAAC +
Preference number: 4 (lower is better)
Translates to: CTTFIKGCIAIGIQEGAIMMRVK*SRDYLN
Trigger: GTTCAGATAATCCCTGCTGCATTTTACCCTCATCAT...TATAGCACCCTCTTGTATTCCTATGGCAATGCATCCTTTTATGAAAGTGGTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TATGGTTGCCTTTTGAGCTACTGTATGACTCTATTTGCCTTTCACATAACTAGCAGGAATACAAGAGGGTaGTATAATAAACCCTTGACC +
Preference number: 4 (lower is better)
Translates to: YGCLLSYCMTLFAFHITSRNTRG*YNKPLT
Trigger: GGTCAAGGGTTTATTATAGCACCCTCTTGTATTCCT...GCTAGTTATGTGAAAGGCAAATAGAGTCATACAGTAGCTCAAAAGGCAACCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp AGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAATCACCAGATACTCTaGTACAGTCATATAAAAGCT +
Preference number: 4 (lower is better)
Translates to: RIWLKWCMMRVKCSRDYLNHQIL*YSHIKA
Trigger: AGCTTTTATATGACTGTAGCAGAGTATCTGGTGATT...CAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp GACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATTTGGTTAAACATATCTaGAAGGTTACTAGGGAAATC +
Preference number: 4 (lower is better)
Translates to: DRIWLKWCMMRVKCSRDYLVKHI*KVTREI
Trigger: GATTTCCCTAGTAACCTTGCAGATATGTTTAACCAA...ATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TTTAAAAAGTGCTTATCAGAGGCAAAATGTCTACTCTCCAGGCCTGGGTCTCTAAAAGAGAATTATGGTTaGCTTTTGAGCTACTGTATG +
Preference number: 4 (lower is better)
Translates to: FKKCLSEAKCLLSRPGSLKENYG*LLSYCM
Trigger: CATACAGTAGCTCAAAAGGCAACCATAATTCTCTTT...TAGAGACCCAGGCCTGGAGAGTAGACATTTTGCCTCTGATAAGCACTTTTTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp CCAATACCAACATCAGCCAGAAAATATCTGCTGTCCATTAGTGGCACTTCAAGTAAAGAGAATTATGGTTaGCTTTTGAGCTACTGTATG +
Preference number: 4 (lower is better)
Translates to: PIPTSARKYLLSISGTSSKENYG*LLSYCM
Trigger: CATACAGTAGCTCAAAAGGCAACCATAATTCTCTTT...ACTTGAAGTGCCACTAATGGACAGCAGATATTTTCTGGCTGATGTTGGTATTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp ACAGTTGACAAACAGGAGCTATTCAGCTCTGTCAGATTGTACTATCAATTATATTTATCAATGGTGCACTaGTTGGTGGCTGGACACATA +
Preference number: 4 (lower is better)
Translates to: TVDKQELFSSVRLYYQLYLSMVH*LVAGHI
Trigger: TATGTGTCCAGCCACCAACCAGTGCACCATTGATAA...ATATAATTGATAGTACAATCTGACAGAGCTGAATAGCTCCTGTTTGTCAACTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CCA 90 bp CTGCTACAGTCATATAAAAGCTTTAAGGTGTACCACTTTCATAAAAGGATGCATTCCTGTTTTTATCAATaGTGCACTGGTTGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LLQSYKSFKVYHFHKRMHSCFYQ*CTGWWL
Trigger: CAGCCACCAACCAGTGCACCATTGATAAAAACAGGA...ATGCATCCTTTTATGAAAGTGGTACACCTTAAAGCTTTTATATGACTGTAGCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp CATATAAAAGCTTTAAGGTGTACCACTTTCATAAAAGGATGCATTGCCATAGGAGCATGGGCTATGGCTTaGTTAAACATATCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: HIKALRCTTFIKGCIAIGAWAMA*LNISAR
Trigger: CCTTGCAGATATGTTTAACCAAGCCATAGCCCATGC...TCCTATGGCAATGCATCCTTTTATGAAAGTGGTACACCTTAAAGCTTTTATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TTCAATACTCTTCTTAATATATTTGCCATTCCCCAGATTCCTGAATCCACTTCCTTCAGGGGATTAACTTaGGAATGGTGCAGTGTAATC +
Preference number: 4 (lower is better)
Translates to: FNTLLNIFAIPQIPESTSFRGLT*EWCSVI
Trigger: GATTACACTGCACCATTCCCAAGTTAATCCCCTGAA...GGAAGTGGATTCAGGAATCTGGGGAATGGCAAATATATTAAGAAGAGTATTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp AAATACAAAGAGATTTCCAAAGTTGCTGGAGACCCCTGGGCGAACATTTCAATCGAAAGGAAATGCAGTTaGAAACAGAGCATAATTAAC +
Preference number: 4 (lower is better)
Translates to: KYKEISKVAGDPWANISIERKCS*KQSIIN
Trigger: GTTAATTATGCTCTGTTTCCAACTGCATTTCCTTTC...GATTGAAATGTTCGCCCAGGGGTCTCCAGCAACTTTGGAAATCTCTTTGTATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp CAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTTTACAAAATAGGACATaGGTGGTTTTTCCGAAAGAA +
Preference number: 4 (lower is better)
Translates to: QNLAKVVHDEGKMQQGLSLQNRT*VVFPKE
Trigger: TTCTTTCGGAAAAACCACCCATGTCCTATTTTGTAA...AGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338799.9
3UTR CAA 72 bp AATGTGTACACTCCAGAATTAAGCAAAATAATAGATTaGAGGCACACAAACTCCTCTCCCTGCAGATTCATC +
Preference number: 4 (lower is better)
Translates to: NVYTPELSKIID*RHTNSSPCRFI
Trigger: GATGAATCTGCAGGGAGAGGAGTTTGTGTGCCTCAAATCTATTATTTTGCTTAATTCTGGAGTGTACACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR TCA 90 bp CTGCTACAGTCATATAAAAGCTTTAAGGTGTACCACTTTCATAAAAGGATGCATGCTATAATAAACCCTTaGCCTAGCTTTCTCCAAGTC +
Preference number: 4 (lower is better)
Translates to: LLQSYKSFKVYHFHKRMHAIINP*PSFLQV
Trigger: GACTTGGAGAAAGCTAGGTCAAGGGTTTATTATAGC...ATGCATCCTTTTATGAAAGTGGTACACCTTAAAGCTTTTATATGACTGTAGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp CTGCTACAGTCATATAAAAGCTTTAAGGTGTACCACTTTCATAAAAGGATGCATAGCTTTCAGCACATCTaGATCTGCAGTGTATCAAGT +
Preference number: 4 (lower is better)
Translates to: LLQSYKSFKVYHFHKRMHSFQHI*ICSVSS
Trigger: ACTTGATACACTGCAGATTCAGATGTGCTGAAAGCT...ATGCATCCTTTTATGAAAGTGGTACACCTTAAAGCTTTTATATGACTGTAGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp CTGCTACAGTCATATAAAAGCTTTAAGGTGTACCACTTTCATAAAAGGATGCATTTAAAAAGAACCCACTaGCCCATTAGCTACTGTCCA +
Preference number: 4 (lower is better)
Translates to: LLQSYKSFKVYHFHKRMHLKRTH*PISYCP
Trigger: TGGACAGTAGCTAATGGGTCAGTGGGTTCTTTTTAA...ATGCATCCTTTTATGAAAGTGGTACACCTTAAAGCTTTTATATGACTGTAGCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp CTGCTACAGTCATATAAAAGCTTTAAGGTGTACCACTTTCATAAAAGGATGCATTTCATGCTGTACAGATaGTCCATGCCTTTGTTACTC +
Preference number: 4 (lower is better)
Translates to: LLQSYKSFKVYHFHKRMHFMLYR*SMPLLL
Trigger: GAGTAACAAAGGCATGGAGCATCTGTACAGCATGAA...ATGCATCCTTTTATGAAAGTGGTACACCTTAAAGCTTTTATATGACTGTAGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TTCAATACTCTTCTTAATATATTTGCCATTCCCCAGATTCCTGAATCCACTTCCATTTGGCTAAAGTGGTaGATGATGAGGGTAAAATGC +
Preference number: 4 (lower is better)
Translates to: FNTLLNIFAIPQIPESTSIWLKW*MMRVKC
Trigger: GCATTTTACCCTCATCATGCACCACTTTAGCCAAAT...GGAAGTGGATTCAGGAATCTGGGGAATGGCAAATATATTAAGAAGAGTATTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp CATATAAAAGCTTTAAGGTGTACCACTTTCATAAAAGGATGCATTGCCATAGGAATGTTGTTTCTAGGGTaGACAGCTCTAAACACACAC +
Preference number: 4 (lower is better)
Translates to: HIKALRCTTFIKGCIAIGMLFLG*TALNTH
Trigger: GTGTGTGTTTAGAGCTGTGCACCCTAGAAACAACAT...TCCTATGGCAATGCATCCTTTTATGAAAGTGGTACACCTTAAAGCTTTTATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp TGTACCACTTTCATAAAAGGATGCATTGCCATAGGAATACAAGAGGGTGCTATAACATCAGTAATAGTATaGATCGGCAAAAGGGCATAT +
Preference number: 4 (lower is better)
Translates to: CTTFIKGCIAIGIQEGAITSVIV*IGKRAY
Trigger: ATATGCCCTTTTGCCGATGCATACTATTACTGATGT...TATAGCACCCTCTTGTATTCCTATGGCAATGCATCCTTTTATGAAAGTGGTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp TATGGTTGCCTTTTGAGCTACTGTATGACTCTATTTGCCTTTCACATAACTAGCAGAATTTGGCTAAAGTaGTGCATGATGAGGGTAAAA +
Preference number: 4 (lower is better)
Translates to: YGCLLSYCMTLFAFHITSRIWLK*CMMRVK
Trigger: TTTTACCCTCATCATGCACCACTTTAGCCAAATTCT...GCTAGTTATGTGAAAGGCAAATAGAGTCATACAGTAGCTCAAAAGGCAACCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp CTGCTACAGTCATATAAAAGCTTTAAGGTGTACCACTTTCATAAAAGGATGCATTTCAGGGGATTAACTTaGGAATGGTGCAGTGTAATC +
Preference number: 4 (lower is better)
Translates to: LLQSYKSFKVYHFHKRMHFRGLT*EWCSVI
Trigger: GATTACACTGCACCATTCCCAAGTTAATCCCCTGAA...ATGCATCCTTTTATGAAAGTGGTACACCTTAAAGCTTTTATATGACTGTAGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp TTCAATACTCTTCTTAATATATTTGCCATTCCCCAGATTCCTGAATCCACTTCCACACAATTTGGCATTTaGGCCTTTTCCCATAAAACA +
Preference number: 4 (lower is better)
Translates to: FNTLLNIFAIPQIPESTSTQFGI*AFSHKT
Trigger: TGTTTTATGGGAAAAGGCTCAAATGCCAAATTGTGT...GGAAGTGGATTCAGGAATCTGGGGAATGGCAAATATATTAAGAAGAGTATTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR TCA 90 bp ACAGTTGACAAACAGGAGCTATTCAGCTCTGTCAGATTGTACTATCAATTATATCAAAGCAAATGCTTATaGTGGTCTAGCTGGTACTTT +
Preference number: 4 (lower is better)
Translates to: TVDKQELFSSVRLYYQLYQSKCL*WSSWYF
Trigger: AAAGTACCAGCTAGACCATCATAAGCATTTGCTTTG...ATATAATTGATAGTACAATCTGACAGAGCTGAATAGCTCCTGTTTGTCAACTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR GCA 90 bp TTTCATAAAAGGATGCATTGCCATAGGAATACAAGAGGGTGCTATAATAAACCCACATCAGTAATAGTATaGATCGGCAAAAGGGCATAT +
Preference number: 4 (lower is better)
Translates to: FHKRMHCHRNTRGCYNKPTSVIV*IGKRAY
Trigger: ATATGCCCTTTTGCCGATGCATACTATTACTGATGT...GGGTTTATTATAGCACCCTCTTGTATTCCTATGGCAATGCATCCTTTTATGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp CCTACATATGAATTGATGCCAATAGGTACTGAACACCTACTAAATTTAGGCCCTTTGTTTCCAGCAGTCTaGAATGGGAAATTTTTAGAT +
Preference number: 4 (lower is better)
Translates to: PTYELMPIGTEHLLNLGPLFPAV*NGKFLD
Trigger: ATCTAAAAATTTCCCATTGCAGACTGCTGGAAACAA...AGGGCCTAAATTTAGTAGGTGTTCAGTACCTATTGGCATCAATTCATATGTAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CCA 90 bp CTGCTACAGTCATATAAAAGCTTTAAGGTGTACCACTTTCATAAAAGGATGCATCACCAAAGAGAATTATaGTTGCCTTTTGAGCTACTG +
Preference number: 4 (lower is better)
Translates to: LLQSYKSFKVYHFHKRMHHQREL*LPFELL
Trigger: CAGTAGCTCAAAAGGCAACCATAATTCTCTTTGGTG...ATGCATCCTTTTATGAAAGTGGTACACCTTAAAGCTTTTATATGACTGTAGCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CCA 90 bp ACAGTTGACAAACAGGAGCTATTCAGCTCTGTCAGATTGTACTATCAATTATATCTACTCAGGTGGGACTaGAACATAAATAATCTTCAC +
Preference number: 4 (lower is better)
Translates to: TVDKQELFSSVRLYYQLYLLRWD*NINNLH
Trigger: GTGAAGATTATTTATGTTCCAGTCCCACCTGAGTAG...ATATAATTGATAGTACAATCTGACAGAGCTGAATAGCTCCTGTTTGTCAACTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
3UTR CAA 72 bp ATTTTCCTTTTCAGGCATAATCTTTGCTACATAAGATaGTCTGTCATTCAGTATCCAACAATAGGCATCTGG +
Preference number: 4 (lower is better)
Translates to: IFLFRHNLCYIR*SVIQYPTIGIW
Trigger: CCAGATGCCTATTGTTGGATACTGAATGACAGACAATCTTATGTAGCAAAGATTATGCCTGAAAAGGAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp CATATAAAAGCTTTAAGGTGTACCACTTTCATAAAAGGATGCATTGCCATAGGATTGGTTAAACATATCTaGAAGGTTACTAGGGAAATC +
Preference number: 4 (lower is better)
Translates to: HIKALRCTTFIKGCIAIGLVKHI*KVTREI
Trigger: GATTTCCCTAGTAACCTTGCAGATATGTTTAACCAA...TCCTATGGCAATGCATCCTTTTATGAAAGTGGTACACCTTAAAGCTTTTATATG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp CTGCTACAGTCATATAAAAGCTTTAAGGTGTACCACTTTCATAAAAGGATGCATTTGGTTAAACATATCTaGAAGGTTACTAGGGAAATC +
Preference number: 4 (lower is better)
Translates to: LLQSYKSFKVYHFHKRMHLVKHI*KVTREI
Trigger: GATTTCCCTAGTAACCTTGCAGATATGTTTAACCAA...ATGCATCCTTTTATGAAAGTGGTACACCTTAAAGCTTTTATATGACTGTAGCAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR GCA 90 bp ACAGTTGACAAACAGGAGCTATTCAGCTCTGTCAGATTGTACTATCAATTATATCACACTTTAGAAGCATaGTTTCAAAGCAAATGCTTA +
Preference number: 4 (lower is better)
Translates to: TVDKQELFSSVRLYYQLYHTLEA*FQSKCL
Trigger: TAAGCATTTGCTTTGAAAGCATGCTTCTAAAGTGTG...ATATAATTGATAGTACAATCTGACAGAGCTGAATAGCTCCTGTTTGTCAACTGT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS TCA 90 bp GGCCGGTCTGACCGTAGACCTGCGCGTTGGCGGCGGCCGCGGCGTTaGACTCGTAGGCGGCGCCCTCGGGGTAGTTGTACACGGCGGGCT +
Preference number: 5 (lower is better)
Translates to: GRSDRRPARWRRPRR*TRRRRPRGSCTRRA
Trigger: AGCCCGCCGTGTACAACTACCCCGAGGGCGCCGCCTACGAGTTCAACGCCGCGGCCGCCGCCAACGCGCAGGTCTACGGTCAGACCGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000404742.5
ENST00000406599.5
ENST00000440973.5
ENST00000443427.5
ENST00000446550.1
ENST00000456483.3
CDS GCA 90 bp TTTGGTGTGGAGGGTCATGGTCATGGTCCGTGGCCGCGGGCAGGGTaGAGACCGTGTCCCCGCAGGGCAGAAGGCTCAGAAACCGGCGGG +
Preference number: 5 (lower is better)
Translates to: FGVEGHGHGPWPRAG*RPCPRRAEGSETGG
Trigger: CCCGCCGGTTTCTGAGCCTTCTGCCCTGCGGGGACACGGTCTGCACCCTGCCCGCGGCCACGGACCATGACCATGACCCTCCACACCAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000404742.5
ENST00000406599.5
ENST00000440973.5
ENST00000443427.5
ENST00000446550.1
ENST00000456483.3
CDS CCA 90 bp GGCCATCCCAGATGCTTTGGTGTGGAGGGTCATGGTCATGGTCCGTaGCCGCGGGCAGGGTGCAGACCGTGTCCCCGCAGGGCAGAAGGC +
Preference number: 5 (lower is better)
Translates to: GHPRCFGVEGHGHGP*PRAGCRPCPRRAEG
Trigger: GCCTTCTGCCCTGCGGGGACACGGTCTGCACCCTGCCCGCGGCCACGGACCATGACCATGACCCTCCACACCAAAGCATCTGGGATGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000404742.5
ENST00000406599.5
ENST00000440973.5
ENST00000443427.5
ENST00000446550.1
ENST00000456483.3
CDS CCA 90 bp GCAGTAGGGCCATCCCAGATGCTTTGGTGTGGAGGGTCATGGTCATaGTCCGTGGCCGCGGGCAGGGTGCAGACCGTGTCCCCGCAGGGC +
Preference number: 5 (lower is better)
Translates to: AVGPSQMLWCGGSWS*SVAAGRVQTVSPQG
Trigger: GCCCTGCGGGGACACGGTCTGCACCCTGCCCGCGGCCACGGACCATGACCATGACCCTCCACACCAAAGCATCTGGGATGGCCCTACTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000404742.5
ENST00000406599.5
ENST00000440973.5
ENST00000443427.5
ENST00000446550.1
ENST00000456483.3
CDS CCA 90 bp CGTGGAATGGCAGGGATTCGGGAAGCAGCCAGTAGGCAGGGCACTTaGCAGCCCCTCCCGGCAGACACGCAGCTGGGCTACTGCACAGCG +
Preference number: 5 (lower is better)
Translates to: RGMAGIREAASRQGT*QPLPADTQLGYCTA
Trigger: CGCTGTGCAGTAGCCCAGCTGCGTGTCTGCCGGGAGGGGCTGCCAAGTGCCCTGCCTACTGGCTGCTTCCCGAATCCCTGCCATTCCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS CCA 90 bp TCTGATGCAGTAGGGCCATCCCAGATGCTTTGGTGTGGAGGGTCATaGTCATGGTCCGTGGCCGCGGGCAGGGTGCAGACCGTGTCCCCG +
Preference number: 5 (lower is better)
Translates to: SDAVGPSQMLWCGGS*SWSVAAGRVQTVSP
Trigger: CGGGGACACGGTCTGCACCCTGCCCGCGGCCACGGACCATGACCATGACCCTCCACACCAAAGCATCTGGGATGGCCCTACTGCATCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000404742.5
ENST00000406599.5
ENST00000440973.5
ENST00000443427.5
ENST00000446550.1
ENST00000456483.3
CDS CCA 90 bp GCTCGTTCCCTTGGATCTGATGCAGTAGGGCCATCCCAGATGCTTTaGTGTGGAGGGTCATGGTCATGGTCCGTGGCCGCGGGCAGGGTG +
Preference number: 5 (lower is better)
Translates to: ARSLGSDAVGPSQML*CGGSWSWSVAAGRV
Trigger: CACCCTGCCCGCGGCCACGGACCATGACCATGACCCTCCACACCAAAGCATCTGGGATGGCCCTACTGCATCAGATCCAAGGGAACGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000404742.5
ENST00000406599.5
ENST00000440973.5
ENST00000443427.5
ENST00000446550.1
ENST00000456483.3
CDS-3UTR CAA 90 bp AGTACTGTTCAGCTCCATGCCCCAGGGCTAAATGCAACACCAGGGCCCCTGCTCCGCTCCAGGGGGATCTaGAGCTGCGGACGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: STVQLHAPGLNATPGPLLRSRGI*SCGRFR
Trigger: CCTGAACCGTCCGCAGCTCAAGATCCCCCTGGAGCG...GAGCAGGGGCCCTGGTGTTGCATTTAGCCCTGGGGCATGGAGCTGAACAGTACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS TCA 90 bp TTGAGCTGCGGACGGTTCAGGGGCTCCAGCTCGTTCCCTTGGATCTaGTGCAGTAGGGCCATCCCAGATGCTTTGGTGTGGAGGGTCATG +
Preference number: 5 (lower is better)
Translates to: LSCGRFRGSSSFPWI*CSRAIPDALVWRVM
Trigger: CATGACCCTCCACACCAAAGCATCTGGGATGGCCCTACTGCATCAGATCCAAGGGAACGAGCTGGAGCCCCTGAACCGTCCGCAGCTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000404742.5
ENST00000406599.5
ENST00000440973.5
ENST00000443427.5
ENST00000446550.1
ENST00000456483.3
CDS CCA 90 bp GTCTTTTGCAAGGAATGCGATGAAGTAGAGCCCGCAGTGGCCAAGTaGCTTTGGTCCGTCTCCTCCACGGATGCCCCTCCACGGCTAGTG +
Preference number: 5 (lower is better)
Translates to: VFCKECDEVEPAVAK*LWSVSSTDAPPRLV
Trigger: CACTAGCCGTGGAGGGGCATCCGTGGAGGAGACGGACCAAAGCCACTTGGCCACTGCGGGCTCTACTTCATCGCATTCCTTGCAAAAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641399.1
CDS-3UTR CAA 90 bp TTTCCAAACAAGACATACCAAGAGAAGCCCGAGCAGCTCACCTGGGTCATTGGCCGCTCCAGGGGGATCTaGAGCTGCGGACGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: FPNKTYQEKPEQLTWVIGRSRGI*SCGRFR
Trigger: CCTGAACCGTCCGCAGCTCAAGATCCCCCTGGAGCG...GCCAATGACCCAGGTGAGCTGCTCGGGCTTCTCTTGGTATGTCTTGTTTGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp ATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGCGCTCCAGGGGGATCTaGAGCTGCGGACGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: MMRVKCSRDYLNRVGARERSRGI*SCGRFR
Trigger: CCTGAACCGTCCGCAGCTCAAGATCCCCCTGGAGCG...CTCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp GTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGCGCTCCAGGGGGATCTaGAGCTGCGGACGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: VHDEGKMQQGLSEPCGSQRSRGI*SCGRFR
Trigger: CCTGAACCGTCCGCAGCTCAAGATCCCCCTGGAGCG...CTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp CAGCATGTCGAAGATCTCCACCATGCCCTCTACACATTTTCCCTGGTTCCACCTCGCTCCAGGGGGATCTaGAGCTGCGGACGGTTCAGG +
Preference number: 5 (lower is better)
Translates to: QHVEDLHHALYTFSLVPPRSRGI*SCGRFR
Trigger: CCTGAACCGTCCGCAGCTCAAGATCCCCCTGGAGCG...AGGTGGAACCAGGGAAAATGTGTAGAGGGCATGGTGGAGATCTTCGACATGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS CCA 90 bp TGTGAACTAGGCAGAGAGAGTGTGTGGATGTGTTTGTGCGTGGAATaGCAGGGATTCGGGAAGCAGCCAGTAGGCAGGGCACTTGGCAGC +
Preference number: 5 (lower is better)
Translates to: CELGRESVWMCLCVE*QGFGKQPVGRALGS
Trigger: GCTGCCAAGTGCCCTGCCTACTGGCTGCTTCCCGAATCCCTGCCATTCCACGCACAAACACATCCACACACTCTCTCTGCCTAGTTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS-3UTR CAA 90 bp GATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGCTTTGTACACGGCGGGCTaGCTGCTGTCCAGGTACACC +
Preference number: 5 (lower is better)
Translates to: DEGKMQQGLSEPCGSQGALYTAG*LLSRYT
Trigger: GGTGTACCTGGACAGCAGCAAGCCCGCCGTGTACAA...AGCTCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp AAAATGTCGAAGGCATCGTTTCTTAGGGCAGCAAGTGCTTCCTCATGCCTCCTACCGGGTGGGACAGGCTaGTCACTGGGCTGGCAGGAG +
Preference number: 5 (lower is better)
Translates to: KMSKASFLRAASASSCLLPGGTG*SLGWQE
Trigger: CTCCTGCCAGCCCAGTGACAAGCCTGTCCCACCCGG...TAGGAGGCATGAGGAAGCACTTGCTGCCCTAAGAAACGATGCCTTCGACATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS TCA 90 bp ACTGAGGTGCTCCTAGAGTGCCCACGCTCAGGGTCCCAGGACACATaGCACCCAATGGAGGCTTTGTTGCCAGACATTAGTCACCACCTT +
Preference number: 5 (lower is better)
Translates to: TEVLLECPRSGSQDT*HPMEALLPDISHHL
Trigger: AAGGTGGTGACTAATGTCTGGCAACAAAGCCTCCATTGGGTGTCATGTGTCCTGGGACCCTGAGCGTGGGCACTCTAGGAGCACCTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS CCA 90 bp CAAGGCCAGGCTGTTCTTCTTAGAGCGTTTGATCATGAGCGGGCTTaGCCAAAGGTTGGCAGCTCTCATGTCTCCAGCAGACCCCACTTC +
Preference number: 5 (lower is better)
Translates to: QGQAVLLRAFDHERA*PKVGSSHVSSRPHF
Trigger: GAAGTGGGGTCTGCTGGAGACATGAGAGCTGCCAACCTTTGGCCAAGCCCGCTCATGATCAAACGCTCTAAGAAGAACAGCCTGGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000427531.6
ENST00000440973.5
ENST00000443427.5
ENST00000482101.1
ENST00000641399.1
CDS-3UTR CAA 90 bp TGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGTTGTACACGGCGGGCTaGCTGCTGTCCAGGTACACC +
Preference number: 5 (lower is better)
Translates to: CMMRVKCSRDYLNRVGARLYTAG*LLSRYT
Trigger: GGTGTACCTGGACAGCAGCAAGCCCGCCGTGTACAA...CCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp GTGATCTTGTCCAGGACTCGGTGGATATGGTCCTTCTCTTCCAGAGACTTCAGGTTGTACACGGCGGGCTaGCTGCTGTCCAGGTACACC +
Preference number: 5 (lower is better)
Translates to: VILSRTRWIWSFSSRDFRLYTAG*LLSRYT
Trigger: GGTGTACCTGGACAGCAGCAAGCCCGCCGTGTACAA...CCTGAAGTCTCTGGAAGAGAAGGACCATATCCACCGAGTCCTGGACAAGATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR CAA 90 bp ATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGCTCGGGCTTGGCCAAAGGTaGGCAGCTCTCATGTCTCCA +
Preference number: 5 (lower is better)
Translates to: MRVKCSRDYLNRVGARELGLGQR*AALMSP
Trigger: TGGAGACATGAGAGCTGCCAACCTTTGGCCAAGCCC...GAGCTCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp GGGGGAAAGCGCTTATGTTATGATGCAACGCCAACAGCAGTCACTCTTTGGTTCCGTCGGTACCTCTGTTaGGGGCACACCCAACCCCGA +
Preference number: 5 (lower is better)
Translates to: GGKRLCYDATPTAVTLWFRRYLC*GHTQPR
Trigger: TCGGGGTTGGGTGTGCCCCAAACAGAGGTACCGACG...GAACCAAAGAGTGACTGCTGTTGGCGTTGCATCATAACATAAGCGCTTTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS TCA 90 bp GTCAAATCCACAAAGCCTGGCACCCTCTTCGCCCAGTTGATCATGTaGACCAGCTCCCTGTCTGCCAGGTTGGTCAGTAAGCCCATCATC +
Preference number: 5 (lower is better)
Translates to: VKSTKPGTLFAQLIM*TSSLSARLVSKPII
Trigger: GATGATGGGCTTACTGACCAACCTGGCAGACAGGGAGCTGGTTCACATGATCAACTGGGCGAAGAGGGTGCCAGGCTTTGTGGATTTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000427531.6
ENST00000440973.5
ENST00000443427.5
ENST00000641399.1
CDS-3UTR CAA 90 bp GATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGCTTCCCTGTCTGCCAGGTaGGTCAGTAAGCCCATCATC +
Preference number: 5 (lower is better)
Translates to: DEGKMQQGLSEPCGSQGASLSAR*VSKPII
Trigger: GATGATGGGCTTACTGACCAACCTGGCAGACAGGGA...AGCTCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp AGTGTCTGTGATCTTGTCCAGGACTCGGTGGATATGGTCCTTCTCTTCCAGAGAAGTGGCCAAGTGGCTTaGGTCCGTCTCCTCCACGGA +
Preference number: 5 (lower is better)
Translates to: SVCDLVQDSVDMVLLFQRSGQVA*VRLLHG
Trigger: TCCGTGGAGGAGACGGACCAAAGCCACTTGGCCACT...TCTCTGGAAGAGAAGGACCATATCCACCGAGTCCTGGACAAGATCACAGACACT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR CAA 90 bp ATTGTGCTAGAGAAGCAAAGGCCCAGGGAAGGCTGCCCTGTGGCTGGAATGAGCTTCCCTGTGTGCCCCTaGTATTCCTATAGGGGGAAT +
Preference number: 5 (lower is better)
Translates to: IVLEKQRPREGCPVAGMSFPVCP*YSYRGN
Trigger: ATTCCCCCTATAGGAATACAAGGGGCACACAGGGAA...GCTCATTCCAGCCACAGGGCAGCCTTCCCTGGGCCTTTGCTTCTCTAGCACAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp CCCTGTGTAAGGCACACACACGCCGGGAAGATCCAAGTACAGTGCCCACTGGAATTCCCTGTGTGCCCCTaGTATTCCTATAGGGGGAAT +
Preference number: 5 (lower is better)
Translates to: PCVRHTHAGKIQVQCPLEFPVCP*YSYRGN
Trigger: ATTCCCCCTATAGGAATACAAGGGGCACACAGGGAA...TTCCAGTGGGCACTGTACTTGGATCTTCCCGGCGTGTGTGTGCCTTACACAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS TCA 90 bp CCAATCATCAGGATCTCTAGCCAGGCACATTCTAGAAGGTGGACCTaGTCATGGAGGGTCAAATCCACAAAGCCTGGCACCCTCTTCGCC +
Preference number: 5 (lower is better)
Translates to: PIIRISSQAHSRRWT*SWRVKSTKPGTLFA
Trigger: GGCGAAGAGGGTGCCAGGCTTTGTGGATTTGACCCTCCATGATCAGGTCCACCTTCTAGAATGTGCCTGGCTAGAGATCCTGATGATTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000427531.6
ENST00000440973.5
ENST00000443427.5
ENST00000641399.1
CDS TCA 90 bp GATACATGTGGATCAAATGCCTTACTGGCCCTAGCCCCCAGTCTCTaGACAGAGGCATTGCCATGCCTCCGATTGCACCAGGAAACCAGA +
Preference number: 5 (lower is better)
Translates to: DTCGSNALLALAPSL*TEALPCLRLHQETR
Trigger: TCTGGTTTCCTGGTGCAATCGGAGGCATGGCAATGCCTCTGTTCAGAGACTGGGGGCTAGGGCCAGTAAGGCATTTGATCCACATGTATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS GCA 90 bp TTCCTGTCCAAGAGCAAGTTAGGAGCAAACAGTAGCTTCCCTGGGTaGTCCATGGAGCGCCAGACGAGACCAATCATCAGGATCTCTAGC +
Preference number: 5 (lower is better)
Translates to: FLSKSKLGANSSFPG*SMERQTRPIIRISS
Trigger: GCTAGAGATCCTGATGATTGGTCTCGTCTGGCGCTCCATGGAGCACCCAGGGAAGCTACTGTTTGCTCCTAACTTGCTCTTGGACAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000415488.1
ENST00000427531.6
ENST00000440973.5
ENST00000443427.5
ENST00000641399.1
CDS CCA 90 bp GCAGCTCTTCCTCCTGTTTTTATCAATGGTGCACTGGTTGGTGGCTaGACACATATAGTCGTTATGTCCTGTAGAATGCCGGCGGGCCGG +
Preference number: 5 (lower is better)
Translates to: AALPPVFINGALVGG*THIVVMSCRMPAGR
Trigger: CCGGCCCGCCGGCATTCTACAGGACATAACGACTATATGTGTCCAGCCACCAACCAGTGCACCATTGATAAAAACAGGAGGAAGAGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR CAA 90 bp AGTACTGTTCAGCTCCATGCCCCAGGGCTAAATGCAACACCAGGGCCCCTGCTCATAGCCATACTTCCCTaGTCATTGGTACTGGCCAAT +
Preference number: 5 (lower is better)
Translates to: STVQLHAPGLNATPGPLLIAILP*SLVLAN
Trigger: ATTGGCCAGTACCAATGACAAGGGAAGTATGGCTAT...GAGCAGGGGCCCTGGTGTTGCATTTAGCCCTGGGGCATGGAGCTGAACAGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp ATTGTGCTAGAGAAGCAAAGGCCCAGGGAAGGCTGCCCTGTGGCTGGAATGAGCAGATGCTCCATGCCTTaGTTACTCATGTGCCTGATG +
Preference number: 5 (lower is better)
Translates to: IVLEKQRPREGCPVAGMSRCSMP*LLMCLM
Trigger: CATCAGGCACATGAGTAACAAAGGCATGGAGCATCT...GCTCATTCCAGCCACAGGGCAGCCTTCCCTGGGCCTTTGCTTCTCTAGCACAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp AGTACTGTTCAGCTCCATGCCCCAGGGCTAAATGCAACACCAGGGCCCCTGCTCTCATGGGACAATATGTaGTTTCTAGGGTGCACAGCT +
Preference number: 5 (lower is better)
Translates to: STVQLHAPGLNATPGPLLSWDNM*FLGCTA
Trigger: AGCTGTGCACCCTAGAAACAACATATTGTCCCATGA...GAGCAGGGGCCCTGGTGTTGCATTTAGCCCTGGGGCATGGAGCTGAACAGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS TCA 90 bp CACTTTCTCAACTATTCTCTCGGCCATAGTACTAACACGCAATACTaGGGTGCTCCTAGAGTGCCCACGCTCAGGGTCCCAGGACACATG +
Preference number: 5 (lower is better)
Translates to: HFLNYSLGHSTNTQY*GAPRVPTLRVPGHM
Trigger: CATGTGTCCTGGGACCCTGAGCGTGGGCACTCTAGGAGCACCTCAGTATTGCGTGTTAGTACTATGGCCGAGAGAATAGTTGAGAAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS TCA 90 bp CATATATCCATCCTTTCTGGCACCCTCTTCGCCCAGTTGATCATGTaGACCAGCTCCCTGTCTGCCAGGTTGGTCAGTAAGCCCATCATC +
Preference number: 5 (lower is better)
Translates to: HISILSGTLFAQLIM*TSSLSARLVSKPII
Trigger: GATGATGGGCTTACTGACCAACCTGGCAGACAGGGAGCTGGTTCACATGATCAACTGGGCGAAGAGGGTGCCAGAAAGGATGGATATATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482101.1
CDS GCA 90 bp ATAAACGCGAAAGACGGATCCAGGGGCCGGCTTTCTCTAATGTGCTaGCTTATGTGCCCCGTGCCAGACTCCGATATATCTCTGTTTGTC +
Preference number: 5 (lower is better)
Translates to: INAKDGSRGRLSLMC*LMCPVPDSDISLFV
Trigger: GACAAACAGAGATATATCGGAGTCTGGCACGGGGCACATAAGGCAGCACATTAGAGAAAGCCGGCCCCTGGATCCGTCTTTCGCGTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443427.5
ENST00000446550.1
CDS-3UTR CAA 90 bp AAAATGTCGAAGGCATCGTTTCTTAGGGCAGCAAGTGCTTCCTCATGCCTCCTAGGGCTTGGCCAAAGGTaGGCAGCTCTCATGTCTCCA +
Preference number: 5 (lower is better)
Translates to: KMSKASFLRAASASSCLLGLGQR*AALMSP
Trigger: TGGAGACATGAGAGCTGCCAACCTTTGGCCAAGCCC...TAGGAGGCATGAGGAAGCACTTGCTGCCCTAAGAAACGATGCCTTCGACATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CAA 90 bp GTCAGGCCTGCCTTGGCCATCAGGTGGATCAAAGTGTCTGTGATCTTGTCCAGGAGATGCTCCATGCCTTaGTTACTCATGTGCCTGATG +
Preference number: 5 (lower is better)
Translates to: VRPALAIRWIKVSVILSRRCSMP*LLMCLM
Trigger: CATCAGGCACATGAGTAACAAAGGCATGGAGCATCT...CCTGGACAAGATCACAGACACTTTGATCCACCTGATGGCCAAGGCAGGCCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR CAA 90 bp TTTCCAAACAAGACATACCAAGAGAAGCCCGAGCAGCTCACCTGGGTCATTGGCAGGGGCACCACGTTCTaGCACTTCATGCTGTACAGA +
Preference number: 5 (lower is better)
Translates to: FPNKTYQEKPEQLTWVIGRGTTF*HFMLYR
Trigger: TCTGTACAGCATGAAGTGCAAGAACGTGGTGCCCCT...GCCAATGACCCAGGTGAGCTGCTCGGGCTTCTCTTGGTATGTCTTGTTTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp AGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGAAGTGGCCAAGTGGCTTaGGTCCGTCTCCTCCACGGA +
Preference number: 5 (lower is better)
Translates to: RRQNLAKVVHDEGKMQQGSGQVA*VRLLHG
Trigger: TCCGTGGAGGAGACGGACCAAAGCCACTTGGCCACT...TCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp CTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGAGTGGCCAAGTGGCTTaGGTCCGTCTCCTCCACGGA +
Preference number: 5 (lower is better)
Translates to: LKWCMMRVKCSRDYLNRVSGQVA*VRLLHG
Trigger: TCCGTGGAGGAGACGGACCAAAGCCACTTGGCCACT...CACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp AGTACTGTTCAGCTCCATGCCCCAGGGCTAAATGCAACACCAGGGCCCCTGCTCATAGGTCAAAGGAAATaGAAGGAAATGAGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: STVQLHAPGLNATPGPLLIGQRK*KEMSWQ
Trigger: CTGCCAGCTCATTTCCTTCAATTTCCTTTGACCTAT...GAGCAGGGGCCCTGGTGTTGCATTTAGCCCTGGGGCATGGAGCTGAACAGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp CATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAAGCTCACCTGGGTCATaGGCTAACACAGACATCACC +
Preference number: 5 (lower is better)
Translates to: HDEGKMQQGLSEPCGSQGSSPGS*ANTDIT
Trigger: GGTGATGTCTGTGTTAGCCAATGACCCAGGTGAGCT...TCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp GATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGCTCCAGTATTGCAGTGTTaGAGCACAGGAGAGCTCTCT +
Preference number: 5 (lower is better)
Translates to: DEGKMQQGLSEPCGSQGAPVLQC*STGELS
Trigger: AGAGAGCTCTCCTGTGCTCAAACACTGCAATACTGG...AGCTCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS-3UTR CAA 90 bp ATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGCTCCACCCAATGGAGGCTTaGTTGCCAGACATTAGTCAC +
Preference number: 5 (lower is better)
Translates to: MRVKCSRDYLNRVGARELHPMEA*LPDISH
Trigger: GTGACTAATGTCTGGCAACAAAGCCTCCATTGGGTG...GAGCTCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS GCA 90 bp GCAGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATaGAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGCTCTCA +
Preference number: 5 (lower is better)
Translates to: AGDRIWLKWCMMRVK*SRDYLNRVGARELS
Trigger: TGAGAGCTCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS GCA 90 bp AAAGACGGATCCAGGGGCCGGCTTTCTCTAATGTGCTGCCTTATGTaGCCCGTGCCAGACTCCGATATATCTCTGTTTGTCTCTCTTTCT +
Preference number: 5 (lower is better)
Translates to: KDGSRGRLSLMCCLM*PVPDSDISLFVSLS
Trigger: AGAAAGAGAGACAAACAGAGATATATCGGAGTCTGGCACGGGGCACATAAGGCAGCACATTAGAGAAAGCCGGCCCCTGGATCCGTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446550.1
CDS-3UTR CAA 90 bp CATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGTCGATTATCTGAATTaGGCCTGTAGAATGCCGGCG +
Preference number: 5 (lower is better)
Translates to: HDEGKMQQGLSEPCGSQGVDYLN*ACRMPA
Trigger: CGCCGGCATTCTACAGGCCAAATTCAGATAATCGAC...TCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp CCCTGTGTAAGGCACACACACGCCGGGAAGATCCAAGTACAGTGCCCACTGGAAATACTTCCCTTGTCATaGGTACTGGCCAATCTTTCT +
Preference number: 5 (lower is better)
Translates to: PCVRHTHAGKIQVQCPLEILPLS*VLANLS
Trigger: AGAAAGATTGGCCAGTACCAATGACAAGGGAAGTAT...TTCCAGTGGGCACTGTACTTGGATCTTCCCGGCGTGTGTGTGCCTTACACAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp GGGCAGCCAGCTGCACGGACAGTCACTGAATATTGTGTGTTCTCTCTGTCCCCAATAGCCATACTTCCCTaGTCATTGGTACTGGCCAAT +
Preference number: 5 (lower is better)
Translates to: GQPAARTVTEYCVFSLSPIAILP*SLVLAN
Trigger: ATTGGCCAGTACCAATGACAAGGGAAGTATGGCTAT...TGGGGACAGAGAGAACACACAATATTCAGTGACTGTCCGTGCAGCTGGCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CAA 90 bp AGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGAGGGCTTGGCCAAAGGTaGGCAGCTCTCATGTCTCCA +
Preference number: 5 (lower is better)
Translates to: RRQNLAKVVHDEGKMQQGGLGQR*AALMSP
Trigger: TGGAGACATGAGAGCTGCCAACCTTTGGCCAAGCCC...TCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp TGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCTTCTTCTTAGAGCGTTaGATCATGAGCGGGCTTGGC +
Preference number: 5 (lower is better)
Translates to: WCMMRVKCSRDYLNRVGAFFLER*IMSGLG
Trigger: GCCAAGCCCGCTCATGATCAAACGCTCTAAGAAGAA...GGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp ATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGTTCTTCTTAGAGCGTTaGATCATGAGCGGGCTTGGC +
Preference number: 5 (lower is better)
Translates to: MMRVKCSRDYLNRVGAREFFLER*IMSGLG
Trigger: GCCAAGCCCGCTCATGATCAAACGCTCTAAGAAGAA...CTCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp CATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGATTCTTCTTAGAGCGTTaGATCATGAGCGGGCTTGGC +
Preference number: 5 (lower is better)
Translates to: HDEGKMQQGLSEPCGSQGFFLER*IMSGLG
Trigger: GCCAAGCCCGCTCATGATCAAACGCTCTAAGAAGAA...TCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp GATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGCTAAAGTGTCTGTGATCTaGTCCAGGACTCGGTGGATA +
Preference number: 5 (lower is better)
Translates to: DEGKMQQGLSEPCGSQGAKVSVI*SRTRWI
Trigger: TATCCACCGAGTCCTGGACAAGATCACAGACACTTT...AGCTCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp GGCAGGGAAACCCTCTGCCTCCCCCGTGATGTAATACTTTTGCAAGGAATGCGAAAAGTGTCTGTGATCTaGTCCAGGACTCGGTGGATA +
Preference number: 5 (lower is better)
Translates to: GRETLCLPRDVILLQGMRKVSVI*SRTRWI
Trigger: TATCCACCGAGTCCTGGACAAGATCACAGACACTTT...TCGCATTCCTTGCAAAAGTATTACATCACGGGGGAGGCAGAGGGTTTCCCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR CAA 90 bp CATGTCGAAGATCTCCACCATGCCCTCTACACATTTTCCCTGGTTCCACCTTTCAGGGGCACCACGTTCTaGCACTTCATGCTGTACAGA +
Preference number: 5 (lower is better)
Translates to: HVEDLHHALYTFSLVPPFRGTTF*HFMLYR
Trigger: TCTGTACAGCATGAAGTGCAAGAACGTGGTGCCCCT...GAAAGGTGGAACCAGGGAAAATGTGTAGAGGGCATGGTGGAGATCTTCGACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR CAA 90 bp CATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGATCATCTAGAAAGCCATaGGTGTTGGATGCATGCCGG +
Preference number: 5 (lower is better)
Translates to: HDEGKMQQGLSEPCGSQGSSRKP*VLDACR
Trigger: CCGGCATGCATCCAACACCAATGGCTTTCTAGATGA...TCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp TTTCCAAACAAGACATACCAAGAGAAGCCCGAGCAGCTCACCTGGGTCATTGGCTTCCCTGTGTGCCCCTaGTATTCCTATAGGGGGAAT +
Preference number: 5 (lower is better)
Translates to: FPNKTYQEKPEQLTWVIGFPVCP*YSYRGN
Trigger: ATTCCCCCTATAGGAATACAAGGGGCACACAGGGAA...GCCAATGACCCAGGTGAGCTGCTCGGGCTTCTCTTGGTATGTCTTGTTTGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp CCCTGTGTAAGGCACACACACGCCGGGAAGATCCAAGTACAGTGCCCACTGGAATTAACTAAGATCAACTaGCTGCTCTCCATAGGTCCA +
Preference number: 5 (lower is better)
Translates to: PCVRHTHAGKIQVQCPLELTKIN*LLSIGP
Trigger: TGGACCTATGGAGAGCAGCAAGTTGATCTTAGTTAA...TTCCAGTGGGCACTGTACTTGGATCTTCCCGGCGTGTGTGTGCCTTACACAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp GGGCAGCCAGCTGCACGGACAGTCACTGAATATTGTGTGTTCTCTCTGTCCCCAGTCGATTATCTGAATTaGGCCTTCGCCATTGAAGTC +
Preference number: 5 (lower is better)
Translates to: GQPAARTVTEYCVFSLSPVDYLN*AFAIEV
Trigger: GACTTCAATGGCGAAGGCCAAATTCAGATAATCGAC...TGGGGACAGAGAGAACACACAATATTCAGTGACTGTCCGTGCAGCTGGCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CAA 90 bp CTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGCGGGCCACTTTACTaGTCGTCGCTGCTGGATAGA +
Preference number: 5 (lower is better)
Translates to: LKWCMMRVKCSRDYLNRVGGPLY*SSLLDR
Trigger: TCTATCCAGCAGCGACGACAAGTAAAGTGGCCCGCC...CACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443427.5
CDS TCA 90 bp ATGTCCCCACGTCCACACACGGATTTGATGATCTGCAGGATACTGTaGGGCCTTATGACCAGAGGCTTTAGACACGAGGAAACCACTTGT +
Preference number: 5 (lower is better)
Translates to: MSPRPHTDLMICRIL*GLMTRGFRHEETTC
Trigger: ACAAGTGGTTTCCTCGTGTCTAAAGCCTCTGGTCATAAGGCCTCACAGTATCCTGCAGATCATCAAATCCGTGTGTGGACGTGGGGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS CCA 90 bp ACCGTGATTGGGAACGAGGTCTCTCATTTCCCAGTGGCGTTCACATaGATCCACCTCTTGACCACTTTCTCAACTATTCTCTCGGCCATA +
Preference number: 5 (lower is better)
Translates to: TVIGNEVSHFPVAFT*IHLLTTFSTILSAI
Trigger: TATGGCCGAGAGAATAGTTGAGAAAGTGGTCAAGAGGTGGATCCATGTGAACGCCACTGGGAAATGAGAGACCTCGTTCCCAATCACGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS-3UTR CAA 90 bp AGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGTTGTACACGGCGGGCTaGCTGCTGTCCAGGTACACC +
Preference number: 5 (lower is better)
Translates to: RIWLKWCMMRVKCSRDYLLYTAG*LLSRYT
Trigger: GGTGTACCTGGACAGCAGCAAGCCCGCCGTGTACAA...CAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp TTTAAAAAGTGCTTATCAGAGGCAAAATGTCTACTCTCCAGGCCTGGGTCTCTATTGTACACGGCGGGCTaGCTGCTGTCCAGGTACACC +
Preference number: 5 (lower is better)
Translates to: FKKCLSEAKCLLSRPGSLLYTAG*LLSRYT
Trigger: GGTGTACCTGGACAGCAGCAAGCCCGCCGTGTACAA...TAGAGACCCAGGCCTGGAGAGTAGACATTTTGCCTCTGATAAGCACTTTTTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp ACAGCTCTAAACACACACACTGACGATGGGTTTGGAACATGGCAGCATTTACATGGGCTTGGCCAAAGGTaGGCAGCTCTCATGTCTCCA +
Preference number: 5 (lower is better)
Translates to: TALNTHTDDGFGTWQHLHGLGQR*AALMSP
Trigger: TGGAGACATGAGAGCTGCCAACCTTTGGCCAAGCCC...ATGTAAATGCTGCCATGTTCCAAACCCATCGTCAGTGTGTGTGTTTAGAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp GTTTCTGCCCTACTTTCCCTCTTGTTCTCTAGTAGCCACAACAATCCTGCACAATCCCTGTCTGCCAGGTaGGTCAGTAAGCCCATCATC +
Preference number: 5 (lower is better)
Translates to: VSALLSLLFSSSHNNPAQSLSAR*VSKPII
Trigger: GATGATGGGCTTACTGACCAACCTGGCAGACAGGGA...TTGTGCAGGATTGTTGTGGCTACTAGAGAACAAGAGGGAAAGTAGGGCAGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp TGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTTCCCTGTCTGCCAGGTaGGTCAGTAAGCCCATCATC +
Preference number: 5 (lower is better)
Translates to: WLKWCMMRVKCSRDYLNRSLSAR*VSKPII
Trigger: GATGATGGGCTTACTGACCAACCTGGCAGACAGGGA...ACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp AGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATCCCTGTCTGCCAGGTaGGTCAGTAAGCCCATCATC +
Preference number: 5 (lower is better)
Translates to: RRQNLAKVVHDEGKMQQGSLSAR*VSKPII
Trigger: GATGATGGGCTTACTGACCAACCTGGCAGACAGGGA...TCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp TGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAAAGTGTCTGTGATCTaGTCCAGGACTCGGTGGATA +
Preference number: 5 (lower is better)
Translates to: WCMMRVKCSRDYLNRVGAKVSVI*SRTRWI
Trigger: TATCCACCGAGTCCTGGACAAGATCACAGACACTTT...GGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp TGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGATGCTCCATGCCTTaGTTACTCATGTGCCTGATG +
Preference number: 5 (lower is better)
Translates to: WCMMRVKCSRDYLNRVGARCSMP*LLMCLM
Trigger: CATCAGGCACATGAGTAACAAAGGCATGGAGCATCT...GGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp CATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAAGATGCTCCATGCCTTaGTTACTCATGTGCCTGATG +
Preference number: 5 (lower is better)
Translates to: HDEGKMQQGLSEPCGSQGRCSMP*LLMCLM
Trigger: CATCAGGCACATGAGTAACAAAGGCATGGAGCATCT...TCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp CAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTAGTGGCCAAGTGGCTTaGGTCCGTCTCCTCCACGGA +
Preference number: 5 (lower is better)
Translates to: QNLAKVVHDEGKMQQGLSSGQVA*VRLLHG
Trigger: TCCGTGGAGGAGACGGACCAAAGCCACTTGGCCACT...AGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp ATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGCTCTGCAGGAGACAGAATTaGGCTAAAGTGGTGCATGAT +
Preference number: 5 (lower is better)
Translates to: MRVKCSRDYLNRVGARELCRRQN*AKVVHD
Trigger: ATCATGCACCACTTTAGCCAAATTCTGTCTCCTGCA...GAGCTCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp CCCTGTGTAAGGCACACACACGCCGGGAAGATCCAAGTACAGTGCCCACTGGAATATAGGGGGAATGAATaGACAATCACCAGATACTCT +
Preference number: 5 (lower is better)
Translates to: PCVRHTHAGKIQVQCPLEYRGNE*TITRYS
Trigger: AGAGTATCTGGTGATTGTCAATTCATTCCCCCTATA...TTCCAGTGGGCACTGTACTTGGATCTTCCCGGCGTGTGTGTGCCTTACACAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp GCAAGGGGGAAAGAGAGCTGTTACAAAGATTTAGCCTTGGAATCCCTTTGGCTGAGCTCACCTGGGTCATaGGCTAACACAGACATCACC +
Preference number: 5 (lower is better)
Translates to: ARGKESCYKDLALESLWLSSPGS*ANTDIT
Trigger: GGTGATGTCTGTGTTAGCCAATGACCCAGGTGAGCT...CAGCCAAAGGGATTCCAAGGCTAAATCTTTGTAACAGCTCTCTTTCCCCCTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp CCCTGTGTAAGGCACACACACGCCGGGAAGATCCAAGTACAGTGCCCACTGGAAAGTGCACAAAAAGCATaGTTTATCACCTGTGAGAGA +
Preference number: 5 (lower is better)
Translates to: PCVRHTHAGKIQVQCPLESAQKA*FITCER
Trigger: TCTCTCACAGGTGATAAACAATGCTTTTTGTGCACT...TTCCAGTGGGCACTGTACTTGGATCTTCCCGGCGTGTGTGTGCCTTACACAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp GGGGGAAAGCGCTTATGTTATGATGCAACGCCAACAGCAGTCACTCTTTGGTTCCGTCCACACACGGATTaGATGATCTGCAGGATACTG +
Preference number: 5 (lower is better)
Translates to: GGKRLCYDATPTAVTLWFRPHTD*MICRIL
Trigger: CAGTATCCTGCAGATCATCAAATCCGTGTGTGGACG...GAACCAAAGAGTGACTGCTGTTGGCGTTGCATCATAACATAAGCGCTTTCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CAA 90 bp GGGCAGCCAGCTGCACGGACAGTCACTGAATATTGTGTGTTCTCTCTGTCCCCATCAGACTTCTCACAATaGTGTGTCCTACACACTTTC +
Preference number: 5 (lower is better)
Translates to: GQPAARTVTEYCVFSLSPSDFSQ*CVLHTF
Trigger: GAAAGTGTGTAGGACACACAATTGTGAGAAGTCTGA...TGGGGACAGAGAGAACACACAATATTCAGTGACTGTCCGTGCAGCTGGCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CAA 90 bp CACTCTTTGGTTCCCAAATATTGCGTCTATCTGCTCTCCGCATTGTTTCAGACACCTCCTAACAGGGCTTaGCAGCTGGGACAGCCACAT +
Preference number: 5 (lower is better)
Translates to: HSLVPKYCVYLLSALFQTPPNRA*QLGQPH
Trigger: ATGTGGCTGTCCCAGCTGCAAAGCCCTGTTAGGAGG...TGTCTGAAACAATGCGGAGAGCAGATAGACGCAATATTTGGGAACCAAAGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS TCA 90 bp CCAATCATCAGGATCTCTAGCCAGGCACATTCTAGAAGGTGGACCTaGTCATGGAGGGTCAAATCCACAAAGCCACCTTTCATCATTCCC +
Preference number: 5 (lower is better)
Translates to: PIIRISSQAHSRRWT*SWRVKSTKPPFIIP
Trigger: GGGAATGATGAAAGGTGGCTTTGTGGATTTGACCCTCCATGATCAGGTCCACCTTCTAGAATGTGCCTGGCTAGAGATCCTGATGATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415488.1
CDS TCA 90 bp ATAGTCTTGAGAATCTTTCAAGATGGACCAGGCTGTTCTTGCCTGTaGGTTGTCTGTCTGTGCGCCTCATCTTCAGGGAGAGTTGGTGGA +
Preference number: 5 (lower is better)
Translates to: IVLRIFQDGPGCSCL*VVCLCASSSGRVGG
Trigger: TCCACCAACTCTCCCTGAAGATGAGGCGCACAGACAGACAACTCACAGGCAAGAACAGCCTGGTCCATCTTGAAAGATTCTCAAGACTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482101.1
CDS-3UTR CAA 90 bp ATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGCTCATACTTCCCTTGTCATaGGTACTGGCCAATCTTTCT +
Preference number: 5 (lower is better)
Translates to: MRVKCSRDYLNRVGARELILPLS*VLANLS
Trigger: AGAAAGATTGGCCAGTACCAATGACAAGGGAAGTAT...GAGCTCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp TGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGTGCAGGAGACAGAATTaGGCTAAAGTGGTGCATGAT +
Preference number: 5 (lower is better)
Translates to: CMMRVKCSRDYLNRVGARCRRQN*AKVVHD
Trigger: ATCATGCACCACTTTAGCCAAATTCTGTCTCCTGCA...CCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp AAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAAGAAAGCCATTGGTGTaGGATGCATGCCGGAGTGTA +
Preference number: 5 (lower is better)
Translates to: KWCMMRVKCSRDYLNRVGRKPLV*DACRSV
Trigger: TACACTCCGGCATGCATCCAACACCAATGGCTTTCT...TCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp ATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGCTCTACAAAGATTTAGCCTaGGAATCCCTTTGGCTGTTC +
Preference number: 5 (lower is better)
Translates to: MRVKCSRDYLNRVGARELYKDLA*ESLWLF
Trigger: GAACAGCCAAAGGGATTCCAAGGCTAAATCTTTGTA...GAGCTCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp AAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGGCCCTACTTTCCCTCTaGTTCTCTAGTAGCCACAAC +
Preference number: 5 (lower is better)
Translates to: KVVHDEGKMQQGLSEPCGALLSL*FSSSHN
Trigger: GTTGTGGCTACTAGAGAACAAGAGGGAAAGTAGGGC...CCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp CTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGAGCTCACCTGGGTCATaGGCTAACACAGACATCACC +
Preference number: 5 (lower is better)
Translates to: LKWCMMRVKCSRDYLNRVSSPGS*ANTDIT
Trigger: GGTGATGTCTGTGTTAGCCAATGACCCAGGTGAGCT...CACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp CTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGAAGAGATTTCCAAAGTaGCTGGAGACCCCTGGGCGA +
Preference number: 5 (lower is better)
Translates to: LKWCMMRVKCSRDYLNRVKRFPK*LETPGR
Trigger: TCGCCCAGGGGTCTCCAGCAACTTTGGAAATCTCTT...CACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp GCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTTTGCCATGCCTCCGATaGCACCAGGAAACCAGACTT +
Preference number: 5 (lower is better)
Translates to: AKVVHDEGKMQQGLSEPCLPCLR*HQETRL
Trigger: AAGTCTGGTTTCCTGGTGCAATCGGAGGCATGGCAA...ACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS-3UTR CAA 90 bp GGGGGAAAGCGCTTATGTTATGATGCAACGCCAACAGCAGTCACTCTTTGGTTCACCTTCACAGACAGGTaGTGGTTGAACATTCTTGGG +
Preference number: 5 (lower is better)
Translates to: GGKRLCYDATPTAVTLWFTFTDR*WLNILG
Trigger: CCCAAGAATGTTCAACCACAACCTGTCTGTGAAGGT...GAACCAAAGAGTGACTGCTGTTGGCGTTGCATCATAACATAAGCGCTTTCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CAA 90 bp CGAGAAGGGGGAAAGCGCTTATGTTATGATGCAACGCCAACAGCAGTCACTCTTTTTGGTTCCCAAATATaGCGTCTATCTGCTCTCCGC +
Preference number: 5 (lower is better)
Translates to: REGGKRLCYDATPTAVTLFGSQI*RLSALR
Trigger: GCGGAGAGCAGATAGACGCAATATTTGGGAACCAAA...AAGAGTGACTGCTGTTGGCGTTGCATCATAACATAAGCGCTTTCCCCCTTCTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CAA 90 bp AGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGAGTCGATTATCTGAATTaGGCCTGTAGAATGCCGGCG +
Preference number: 5 (lower is better)
Translates to: RRQNLAKVVHDEGKMQQGVDYLN*ACRMPA
Trigger: CGCCGGCATTCTACAGGCCAAATTCAGATAATCGAC...TCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp GCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGTCGATTATCTGAATTaGGCCTGTAGAATGCCGGCG +
Preference number: 5 (lower is better)
Translates to: AKVVHDEGKMQQGLSEPCVDYLN*ACRMPA
Trigger: CGCCGGCATTCTACAGGCCAAATTCAGATAATCGAC...ACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp AATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAAGGGCTTGGCCAAAGGTaGGCAGCTCTCATGTCTCCA +
Preference number: 5 (lower is better)
Translates to: NLAKVVHDEGKMQQGLSEGLGQR*AALMSP
Trigger: TGGAGACATGAGAGCTGCCAACCTTTGGCCAAGCCC...TTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp CCCTACTTTCCCTCTTGTTCTCTAGTAGCCACAACAATCCTGCACAAGTACTGTTCATCTAGAAAGCCATaGGTGTTGGATGCATGCCGG +
Preference number: 5 (lower is better)
Translates to: PYFPSCSLVATTILHKYCSSRKP*VLDACR
Trigger: CCGGCATGCATCCAACACCAATGGCTTTCTAGATGA...ACAGTACTTGTGCAGGATTGTTGTGGCTACTAGAGAACAAGAGGGAAAGTAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp TGCAGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGATGGAGCTAGTTGATTaGTGGTCTCCAGGGCAGAAG +
Preference number: 5 (lower is better)
Translates to: CRRQNLAKVVHDEGKMQQMELVD*WSPGQK
Trigger: CTTCTGCCCTGGAGACCACAAATCAACTAGCTCCAT...CTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp AAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGATAGGGTCTTCTCTTaGGATGACCTAGCCTCTCAT +
Preference number: 5 (lower is better)
Translates to: KWCMMRVKCSRDYLNRVGDRVFS*DDLASH
Trigger: ATGAGAGGCTAGGTCATCCAAAGAGAAGACCCTATC...TCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp ATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAGCTCATTTTGCAACCTACATaGATAGGGTCTTCTCTTTGG +
Preference number: 5 (lower is better)
Translates to: MRVKCSRDYLNRVGARELILQPT*IGSSLW
Trigger: CCAAAGAGAAGACCCTATCAATGTAGGTTGCAAAAT...GAGCTCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp CCATTGGTGTTGGATGCATGCCGGAGTGTATGCAGGAGACAGAATTTGGCTAAAACACTGACGATGGGTTaGGAACATGGCAGCATTTAC +
Preference number: 5 (lower is better)
Translates to: PLVLDACRSVCRRQNLAKTLTMG*EHGSIY
Trigger: GTAAATGCTGCCATGTTCCAAACCCATCGTCAGTGT...TTTAGCCAAATTCTGTCTCCTGCATACACTCCGGCATGCATCCAACACCAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp AAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAAAGACTGTTACCCTTaGTTGGTGACAGTGGTGCCT +
Preference number: 5 (lower is better)
Translates to: KVVHDEGKMQQGLSEPCGKDCYP*LVTVVP
Trigger: AGGCACCACTGTCACCAACAAAGGGTAACAGTCTTT...CCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS-3UTR CAA 90 bp CTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGAAAGACCCCCAGTATaGCAGTGTTTGAGCACAGGA +
Preference number: 5 (lower is better)
Translates to: LKWCMMRVKCSRDYLNRVERPPV*QCLSTG
Trigger: TCCTGTGCTCAAACACTGCAATACTGGGGGTCTTTC...CACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS-3UTR CAA 90 bp CTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGCCAATGGAGGCTTTGTaGCCAGACATTAGTCACCAC +
Preference number: 5 (lower is better)
Translates to: LKWCMMRVKCSRDYLNRVPMEAL*PDISHH
Trigger: GTGGTGACTAATGTCTGGCAACAAAGCCTCCATTGG...CACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS-3UTR CAA 90 bp TGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGACATGGATCCACCTCTaGACCACTTTCTCAACTATT +
Preference number: 5 (lower is better)
Translates to: CMMRVKCSRDYLNRVGARTWIHL*TTFSTI
Trigger: AATAGTTGAGAAAGTGGTCAAGAGGTGGATCCATGT...CCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS-3UTR CAA 90 bp GGGGGAAAGCGCTTATGTTATGATGCAACGCCAACAGCAGTCACTCTTTGGTTCGGTGTTGAGTGTTGGTaGCCAGGGCATATTTTAAAG +
Preference number: 5 (lower is better)
Translates to: GGKRLCYDATPTAVTLWFGVECW*PGHILK
Trigger: CTTTAAAATATGCCCTGGCAACCAACACTCAACACC...GAACCAAAGAGTGACTGCTGTTGGCGTTGCATCATAACATAAGCGCTTTCCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CAA 90 bp GGGGGAAAGCGCTTATGTTATGATGCAACGCCAACAGCAGTCACTCTTTGGTTCTGGGCAGCCCTTGTTTaGATCTTGATCTTTGACCTA +
Preference number: 5 (lower is better)
Translates to: GGKRLCYDATPTAVTLWFWAALV*ILIFDL
Trigger: TAGGTCAAAGATCAAGATCAAAACAAGGGCTGCCCA...GAACCAAAGAGTGACTGCTGTTGGCGTTGCATCATAACATAAGCGCTTTCCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CAA 90 bp ACCCCGAGAATGAAAGGCAGAGTCTGCTGGGGAAGAATGAACTTCACCCACAGTCCTACACACTTTCTTTaGAAGGGTGTGATTTTAGCC +
Preference number: 5 (lower is better)
Translates to: TPRMKGRVCWGRMNFTHSPTHFL*KGVILA
Trigger: GGCTAAAATCACACCCTTCAAAAGAAAGTGTGTAGG...ACTGTGGGTGAAGTTCATTCTTCCCCAGCAGACTCTGCCTTTCATTCTCGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CAA 90 bp AAAATGTCGAAGGCATCGTTTCTTAGGGCAGCAAGTGCTTCCTCATGCCTCCTAGACCTGGGTCCTAACTaGATTCTGGAAACTTGTCTC +
Preference number: 5 (lower is better)
Translates to: KMSKASFLRAASASSCLLDLGPN*ILETCL
Trigger: GAGACAAGTTTCCAGAATCAAGTTAGGACCCAGGTC...TAGGAGGCATGAGGAAGCACTTGCTGCCCTAAGAAACGATGCCTTCGACATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CAA 90 bp GGGGGAAAGCGCTTATGTTATGATGCAACGCCAACAGCAGTCACTCTTTGGTTCATACTTCCCTTGTCATaGGTACTGGCCAATCTTTCT +
Preference number: 5 (lower is better)
Translates to: GGKRLCYDATPTAVTLWFILPLS*VLANLS
Trigger: AGAAAGATTGGCCAGTACCAATGACAAGGGAAGTAT...GAACCAAAGAGTGACTGCTGTTGGCGTTGCATCATAACATAAGCGCTTTCCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CAA 90 bp AAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGATAGCCATACTTCCCTaGTCATTGGTACTGGCCAAT +
Preference number: 5 (lower is better)
Translates to: KVVHDEGKMQQGLSEPCGIAILP*SLVLAN
Trigger: ATTGGCCAGTACCAATGACAAGGGAAGTATGGCTAT...CCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp AAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAATAGCCATACTTCCCTaGTCATTGGTACTGGCCAAT +
Preference number: 5 (lower is better)
Translates to: KWCMMRVKCSRDYLNRVGIAILP*SLVLAN
Trigger: ATTGGCCAGTACCAATGACAAGGGAAGTATGGCTAT...TCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp TTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGAAAGTGTCTGTGATCTaGTCCAGGACTCGGTGGATA +
Preference number: 5 (lower is better)
Translates to: LAKVVHDEGKMQQGLSEPKVSVI*SRTRWI
Trigger: TATCCACCGAGTCCTGGACAAGATCACAGACACTTT...CGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp TCTACTGAACCCTGGTGCACACCCAGAATTAACCATTTTCCTCCAAATACTTTCAGGGGCACCACGTTCTaGCACTTCATGCTGTACAGA +
Preference number: 5 (lower is better)
Translates to: STEPWCTPRINHFPPNTFRGTTF*HFMLYR
Trigger: TCTGTACAGCATGAAGTGCAAGAACGTGGTGCCCCT...GAAAGTATTTGGAGGAAAATGGTTAATTCTGGGTGTGCACCAGGGTTCAGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp TGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCTATAGGGGGAATGAATaGACAATCACCAGATACTCT +
Preference number: 5 (lower is better)
Translates to: WCMMRVKCSRDYLNRVGAYRGNE*TITRYS
Trigger: AGAGTATCTGGTGATTGTCAATTCATTCCCCCTATA...GGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp CATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGATATAGGGGGAATGAATaGACAATCACCAGATACTCT +
Preference number: 5 (lower is better)
Translates to: HDEGKMQQGLSEPCGSQGYRGNE*TITRYS
Trigger: AGAGTATCTGGTGATTGTCAATTCATTCCCCCTATA...TCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp GCAGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGCAAGTTAAAATAGTCTaGCCAACTAGGGGATCTGCC +
Preference number: 5 (lower is better)
Translates to: AGDRIWLKWCMMRVKCSRQVKIV*PTRGSA
Trigger: GGCAGATCCCCTAGTTGGCAAGACTATTTTAACTTG...CCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp AGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGAGGCATGGGCTATGGCTaGGTTAAACATATCTGCAAG +
Preference number: 5 (lower is better)
Translates to: RRQNLAKVVHDEGKMQQGGMGYG*VKHICK
Trigger: CTTGCAGATATGTTTAACCAAGCCATAGCCCATGCC...TCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp AAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGATCATGGGACAATATGTaGTTTCTAGGGTGCACAGCT +
Preference number: 5 (lower is better)
Translates to: KWCMMRVKCSRDYLNRVGSWDNM*FLGCTA
Trigger: AGCTGTGCACCCTAGAAACAACATATTGTCCCATGA...TCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp CATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAAGTGCACAAAAAGCATaGTTTATCACCTGTGAGAGA +
Preference number: 5 (lower is better)
Translates to: HDEGKMQQGLSEPCGSQGSAQKA*FITCER
Trigger: TCTCTCACAGGTGATAAACAATGCTTTTTGTGCACT...TCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp TTTCCAAACAAGACATACCAAGAGAAGCCCGAGCAGCTCACCTGGGTCATTGGCAATAGGTTGAGAAAATaGTTTACAGGTGCTCGAGCA +
Preference number: 5 (lower is better)
Translates to: FPNKTYQEKPEQLTWVIGNRLRK*FTGARA
Trigger: TGCTCGAGCACCTGTAAACAATTTTCTCAACCTATT...GCCAATGACCCAGGTGAGCTGCTCGGGCTTCTCTTGGTATGTCTTGTTTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp ATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACAGTGTGTGGATGTGTTaGTGCGTGGAATGGCAGGGA +
Preference number: 5 (lower is better)
Translates to: IWLKWCMMRVKCSRDYLNSVWMC*CVEWQG
Trigger: TCCCTGCCATTCCACGCACAAACACATCCACACACT...GTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS-3UTR CAA 90 bp CCTAACTTGATTCTGGAAACTTGTCTCCTGAACCATATATCCAGGAAACACTGGAGCACAGTGTTCACTTaGCTACTCAGGTGGGACTGG +
Preference number: 5 (lower is better)
Translates to: PNLILETCLLNHISRKHWSTVFT*LLRWDW
Trigger: CCAGTCCCACCTGAGTAGCAAAGTGAACACTGTGCT...CCAGTGTTTCCTGGATATATGGTTCAGGAGACAAGTTTCCAGAATCAAGTTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CAA 90 bp AAATACAAAGAGATTTCCAAAGTTGCTGGAGACCCCTGGGCGAACATTTCAATCGTCGATTATCTGAATTaGGCCTGTAGAATGCCGGCG +
Preference number: 5 (lower is better)
Translates to: KYKEISKVAGDPWANISIVDYLN*ACRMPA
Trigger: CGCCGGCATTCTACAGGCCAAATTCAGATAATCGAC...GATTGAAATGTTCGCCCAGGGGTCTCCAGCAACTTTGGAAATCTCTTTGTATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp AAAGGCATGGGCTATGGCTTGGTTAAACATATCTGCAAGGTTACTAGGGAAATCTTCTTCTTAGAGCGTTaGATCATGAGCGGGCTTGGC +
Preference number: 5 (lower is better)
Translates to: KGMGYGLVKHICKVTREIFFLER*IMSGLG
Trigger: GCCAAGCCCGCTCATGATCAAACGCTCTAAGAAGAA...GATTTCCCTAGTAACCTTGCAGATATGTTTAACCAAGCCATAGCCCATGCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp ATTCCTTCGAGGATACCAGAGATCAGTTCTTTGGTTGATACAAATGATAGTGACTCCCTGTCTGCCAGGTaGGTCAGTAAGCCCATCATC +
Preference number: 5 (lower is better)
Translates to: IPSRIPEISSLVDTNDSDSLSAR*VSKPII
Trigger: GATGATGGGCTTACTGACCAACCTGGCAGACAGGGA...GTCACTATCATTTGTATCAACCAAAGAACTGATCTCTGGTATCCTCGAAGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CAA 90 bp CATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGGAAGCAAAATAATAGATTaGAGGCACACAAACTCCTCT +
Preference number: 5 (lower is better)
Translates to: HDEGKMQQGLSEPCGSQGSKIID*RHTNSS
Trigger: AGAGGAGTTTGTGTGCCTCAAATCTATTATTTTGCT...TCCCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp TGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGAGCAAAATAATAGATTaGAGGCACACAAACTCCTCT +
Preference number: 5 (lower is better)
Translates to: CMMRVKCSRDYLNRVGARSKIID*RHTNSS
Trigger: AGAGGAGTTTGTGTGCCTCAAATCTATTATTTTGCT...CCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp CAGCATGTCGAAGATCTCCACCATGCCCTCTACACATTTTCCCTGGTTCCACCTAGCAAAATAATAGATTaGAGGCACACAAACTCCTCT +
Preference number: 5 (lower is better)
Translates to: QHVEDLHHALYTFSLVPPSKIID*RHTNSS
Trigger: AGAGGAGTTTGTGTGCCTCAAATCTATTATTTTGCT...AGGTGGAACCAGGGAAAATGTGTAGAGGGCATGGTGGAGATCTTCGACATGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS-3UTR CAA 90 bp AATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAAAGGGGCACCACGTTCTaGCACTTCATGCTGTACAGA +
Preference number: 5 (lower is better)
Translates to: NLAKVVHDEGKMQQGLSERGTTF*HFMLYR
Trigger: TCTGTACAGCATGAAGTGCAAGAACGTGGTGCCCCT...TTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp TTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGCAGGAGACAGAATTaGGCTAAAGTGGTGCATGAT +
Preference number: 5 (lower is better)
Translates to: LAKVVHDEGKMQQGLSEPCRRQN*AKVVHD
Trigger: ATCATGCACCACTTTAGCCAAATTCTGTCTCCTGCA...CGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp CAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTAGAAAGCCATTGGTGTaGGATGCATGCCGGAGTGTA +
Preference number: 5 (lower is better)
Translates to: QNLAKVVHDEGKMQQGLSRKPLV*DACRSV
Trigger: TACACTCCGGCATGCATCCAACACCAATGGCTTTCT...AGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp ATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACAGAAAGCCATTGGTGTaGGATGCATGCCGGAGTGTA +
Preference number: 5 (lower is better)
Translates to: IWLKWCMMRVKCSRDYLNRKPLV*DACRSV
Trigger: TACACTCCGGCATGCATCCAACACCAATGGCTTTCT...GTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp CAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGCCCTACTTTCCCTCTaGTTCTCTAGTAGCCACAAC +
Preference number: 5 (lower is better)
Translates to: QNLAKVVHDEGKMQQGLSALLSL*FSSSHN
Trigger: GTTGTGGCTACTAGAGAACAAGAGGGAAAGTAGGGC...AGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp GACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATGCCCTACTTTCCCTCTaGTTCTCTAGTAGCCACAAC +
Preference number: 5 (lower is better)
Translates to: DRIWLKWCMMRVKCSRDYALLSL*FSSSHN
Trigger: GTTGTGGCTACTAGAGAACAAGAGGGAAAGTAGGGC...ATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp TGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAGCCAGGCTTTGCTACATAAGATaGTCTGTCATTCAGTATCCA +
Preference number: 5 (lower is better)
Translates to: CMMRVKCSRDYLNRVGARLCYIR*SVIQYP
Trigger: TGGATACTGAATGACAGACAATCTTATGTAGCAAAG...CCTGGCTCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp AAAGGCATGGGCTATGGCTTGGTTAAACATATCTGCAAGGTTACTAGGGAAATCATGGAGCTAGTTGATTaGTGGTCTCCAGGGCAGAAG +
Preference number: 5 (lower is better)
Translates to: KGMGYGLVKHICKVTREIMELVD*WSPGQK
Trigger: CTTCTGCCCTGGAGACCACAAATCAACTAGCTCCAT...GATTTCCCTAGTAACCTTGCAGATATGTTTAACCAAGCCATAGCCCATGCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp ATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACATGGAGCTAGTTGATTaGTGGTCTCCAGGGCAGAAG +
Preference number: 5 (lower is better)
Translates to: IWLKWCMMRVKCSRDYLNMELVD*WSPGQK
Trigger: CTTCTGCCCTGGAGACCACAAATCAACTAGCTCCAT...GTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp GCAGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGTTTCAGGGGATTAACTaGGGAATGGTGCAGTGTAAT +
Preference number: 5 (lower is better)
Translates to: AGDRIWLKWCMMRVKCSRFQGIN*GMVQCN
Trigger: ATTACACTGCACCATTCCCAAGTTAATCCCCTGAAA...CCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp GCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGTTCATTTGCTCCAGTaGAGAGTAAGTTTTCAGGGG +
Preference number: 5 (lower is better)
Translates to: AKVVHDEGKMQQGLSEPCVHLLQ*RVSFQG
Trigger: CCCCTGAAAACTTACTCTCAACTGGAGCAAATGAAC...ACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp TTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGGTTCATTTGCTCCAGTaGAGAGTAAGTTTTCAGGGG +
Preference number: 5 (lower is better)
Translates to: LAKVVHDEGKMQQGLSEPVHLLQ*RVSFQG
Trigger: CCCCTGAAAACTTACTCTCAACTGGAGCAAATGAAC...CGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp TGCACAGCTCTAAACACACACACTGACGATGGGTTTGGAACATGGCAGCATTTAGGGACCAAAGTTCATTaGCTCCAGTTGAGAGTAAGT +
Preference number: 5 (lower is better)
Translates to: CTALNTHTDDGFGTWQHLGTKVH*LQLRVS
Trigger: ACTTACTCTCAACTGGAGCAAATGAACTTTGGTCCC...TAAATGCTGCCATGTTCCAAACCCATCGTCAGTGTGTGTGTTTAGAGCTGTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp TTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGGGGACCAAAGTTCATTaGCTCCAGTTGAGAGTAAGT +
Preference number: 5 (lower is better)
Translates to: LAKVVHDEGKMQQGLSEPGTKVH*LQLRVS
Trigger: ACTTACTCTCAACTGGAGCAAATGAACTTTGGTCCC...CGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp GGGGGAAAGCGCTTATGTTATGATGCAACGCCAACAGCAGTCACTCTTTGGTTCCTTGATTCTGGAAACTaGTCTCCTGAACCATATATC +
Preference number: 5 (lower is better)
Translates to: GGKRLCYDATPTAVTLWFLDSGN*SPEPYI
Trigger: GATATATGGTTCAGGAGACAAGTTTCCAGAATCAAG...GAACCAAAGAGTGACTGCTGTTGGCGTTGCATCATAACATAAGCGCTTTCCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CAA 90 bp TCTTTGGTTCCCAAATATTGCGTCTATCTGCTCTCCGCATTGTTTCAGACAGCCAACAGCAGTCACTCTTaGGTTCCCAAATATTGCGTC +
Preference number: 5 (lower is better)
Translates to: SLVPKYCVYLLSALFQTANSSHS*VPKYCV
Trigger: GACGCAATATTTGGGAACCAAAGAGTGACTGCTGTT...GGCTGTCTGAAACAATGCGGAGAGCAGATAGACGCAATATTTGGGAACCAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS CCA 90 bp GAAGAGAAGATTATCACTCAGAGACTGTCTTCTTATGCTATAGAATaGGCAGGAGAAAGGAGCATGGACCTTTCGAGCCTGTTAAAGAGC +
Preference number: 5 (lower is better)
Translates to: EEKIITQRLSSYAIE*AGERSMDLSSLLKS
Trigger: GCTCTTTAACAGGCTCGAAAGGTCCATGCTCCTTTCTCCTGCCCATTCTATAGCATAAGAAGACAGTCTCTGAGTGATAATCTTCTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404742.5
ENST00000440973.5
CDS-3UTR CAA 90 bp TGCACAGCTCTAAACACACACACTGACGATGGGTTTGGAACATGGCAGCATTTAATACTTCCCTTGTCATaGGTACTGGCCAATCTTTCT +
Preference number: 5 (lower is better)
Translates to: CTALNTHTDDGFGTWQHLILPLS*VLANLS
Trigger: AGAAAGATTGGCCAGTACCAATGACAAGGGAAGTAT...TAAATGCTGCCATGTTCCAAACCCATCGTCAGTGTGTGTGTTTAGAGCTGTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp TCTACTGAACCCTGGTGCACACCCAGAATTAACCATTTTCCTCCAAATACTTTCAAAGTGTCTGTGATCTaGTCCAGGACTCGGTGGATA +
Preference number: 5 (lower is better)
Translates to: STEPWCTPRINHFPPNTFKVSVI*SRTRWI
Trigger: TATCCACCGAGTCCTGGACAAGATCACAGACACTTT...GAAAGTATTTGGAGGAAAATGGTTAATTCTGGGTGTGCACCAGGGTTCAGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp CCAATACCAACATCAGCCAGAAAATATCTGCTGTCCATTAGTGGCACTTCAAGTAGATGCTCCATGCCTTaGTTACTCATGTGCCTGATG +
Preference number: 5 (lower is better)
Translates to: PIPTSARKYLLSISGTSSRCSMP*LLMCLM
Trigger: CATCAGGCACATGAGTAACAAAGGCATGGAGCATCT...ACTTGAAGTGCCACTAATGGACAGCAGATATTTTCTGGCTGATGTTGGTATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp TGTACCACTTTCATAAAAGGATGCATTGCCATAGGAATACAAGAGGGTGCTATAAGGGGCACCACGTTCTaGCACTTCATGCTGTACAGA +
Preference number: 5 (lower is better)
Translates to: CTTFIKGCIAIGIQEGAIRGTTF*HFMLYR
Trigger: TCTGTACAGCATGAAGTGCAAGAACGTGGTGCCCCT...TATAGCACCCTCTTGTATTCCTATGGCAATGCATCCTTTTATGAAAGTGGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp GCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTATAGGTCAAAGGAAATaGAAGGAAATGAGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: AKVVHDEGKMQQGLSEPCIGQRK*KEMSWQ
Trigger: CTGCCAGCTCATTTCCTTCAATTTCCTTTGACCTAT...ACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp TATGGTTGCCTTTTGAGCTACTGTATGACTCTATTTGCCTTTCACATAACTAGCAAGAGATTTCCAAAGTaGCTGGAGACCCCTGGGCGA +
Preference number: 5 (lower is better)
Translates to: YGCLLSYCMTLFAFHITSKRFPK*LETPGR
Trigger: TCGCCCAGGGGTCTCCAGCAACTTTGGAAATCTCTT...GCTAGTTATGTGAAAGGCAAATAGAGTCATACAGTAGCTCAAAAGGCAACCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp CCATTGGTGTTGGATGCATGCCGGAGTGTATGCAGGAGACAGAATTTGGCTAAACTCTTCTTAATATATTaGCCATTCCCCAGATTCCTG +
Preference number: 5 (lower is better)
Translates to: PLVLDACRSVCRRQNLAKLFLIY*PFPRFL
Trigger: CAGGAATCTGGGGAATGGCAAATATATTAAGAAGAG...TTTAGCCAAATTCTGTCTCCTGCATACACTCCGGCATGCATCCAACACCAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp AGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTAGATAGGGTCTTCTCTTaGGATGACCTAGCCTCTCAT +
Preference number: 5 (lower is better)
Translates to: RQNLAKVVHDEGKMQQGLDRVFS*DDLASH
Trigger: ATGAGAGGCTAGGTCATCCAAAGAGAAGACCCTATC...TAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp AAATACAAAGAGATTTCCAAAGTTGCTGGAGACCCCTGGGCGAACATTTCAATCGGCATGGGCTATGGCTaGGTTAAACATATCTGCAAG +
Preference number: 5 (lower is better)
Translates to: KYKEISKVAGDPWANISIGMGYG*VKHICK
Trigger: CTTGCAGATATGTTTAACCAAGCCATAGCCCATGCC...GATTGAAATGTTCGCCCAGGGGTCTCCAGCAACTTTGGAAATCTCTTTGTATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp CCAATACCAACATCAGCCAGAAAATATCTGCTGTCCATTAGTGGCACTTCAAGTGGCATGGGCTATGGCTaGGTTAAACATATCTGCAAG +
Preference number: 5 (lower is better)
Translates to: PIPTSARKYLLSISGTSSGMGYG*VKHICK
Trigger: CTTGCAGATATGTTTAACCAAGCCATAGCCCATGCC...ACTTGAAGTGCCACTAATGGACAGCAGATATTTTCTGGCTGATGTTGGTATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp CTTTCCCTCTTGTTCTCTAGTAGCCACAACAATCCTGCACAAGTACTGTTCAGCTTTCAGGGGATTAACTaGGGAATGGTGCAGTGTAAT +
Preference number: 5 (lower is better)
Translates to: LSLLFSSSHNNPAQVLFSFQGIN*GMVQCN
Trigger: ATTACACTGCACCATTCCCAAGTTAATCCCCTGAAA...GCTGAACAGTACTTGTGCAGGATTGTTGTGGCTACTAGAGAACAAGAGGGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp TTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTCCATCAAACACAATTaGGCATTTGAGCCTTTTCCC +
Preference number: 5 (lower is better)
Translates to: LAKVVHDEGKMQQGLSEPSIKHN*AFEPFP
Trigger: GGGAAAAGGCTCAAATGCCAAATTGTGTTTGATGGA...CGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp AAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGAAATGTGAAGAGATCTTaGTGCTTACTCCTTCCTAGT +
Preference number: 5 (lower is better)
Translates to: KWCMMRVKCSRDYLNRVGNVKRS*CLLLPS
Trigger: ACTAGGAAGGAGTAAGCACAAAGATCTCTTCACATT...TCCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440973.5
CDS-3UTR CAA 90 bp AAAATGTCGAAGGCATCGTTTCTTAGGGCAGCAAGTGCTTCCTCATGCCTCCTAAATTTGATCCAAAGTTaGTGGGTAGCTATCCTATCC +
Preference number: 5 (lower is better)
Translates to: KMSKASFLRAASASSCLLNLIQS*WVAILS
Trigger: GGATAGGATAGCTACCCACAAACTTTGGATCAAATT...TAGGAGGCATGAGGAAGCACTTGCTGCCCTAAGAAACGATGCCTTCGACATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CAA 90 bp AAAATGTCGAAGGCATCGTTTCTTAGGGCAGCAAGTGCTTCCTCATGCCTCCTAGGGACCATTAGCTTCTaGATACTAAAATCGCTAGAA +
Preference number: 5 (lower is better)
Translates to: KMSKASFLRAASASSCLLGTISF*ILKSLE
Trigger: TTCTAGCGATTTTAGTATCAAGAAGCTAATGGTCCC...TAGGAGGCATGAGGAAGCACTTGCTGCCCTAAGAAACGATGCCTTCGACATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CAA 90 bp GGGGGAAAGCGCTTATGTTATGATGCAACGCCAACAGCAGTCACTCTTTGGTTCGAAGTTTCTTCTCATTaGGCTTTAAATGATGCATGC +
Preference number: 5 (lower is better)
Translates to: GGKRLCYDATPTAVTLWFEVSSH*ALNDAC
Trigger: GCATGCATCATTTAAAGCCAAATGAGAAGAAACTTC...GAACCAAAGAGTGACTGCTGTTGGCGTTGCATCATAACATAAGCGCTTTCCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CAA 90 bp CGAGAAGGGGGAAAGCGCTTATGTTATGATGCAACGCCAACAGCAGTCACTCTTGCAACTGAGTTGAAATaGACAGCTAGAAAGATTTCA +
Preference number: 5 (lower is better)
Translates to: REGGKRLCYDATPTAVTLATELK*TARKIS
Trigger: TGAAATCTTTCTAGCTGTCAATTTCAACTCAGTTGC...AAGAGTGACTGCTGTTGGCGTTGCATCATAACATAAGCGCTTTCCCCCTTCTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CAA 90 bp GGGGGAAAGCGCTTATGTTATGATGCAACGCCAACAGCAGTCACTCTTTGGTTCAAACTGACTATTAGTTaGAAGGGAGGAGTTACTCAT +
Preference number: 5 (lower is better)
Translates to: GGKRLCYDATPTAVTLWFKLTIS*KGGVTH
Trigger: ATGAGTAACTCCTCCCTTCAAACTAATAGTCAGTTT...GAACCAAAGAGTGACTGCTGTTGGCGTTGCATCATAACATAAGCGCTTTCCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CAA 90 bp TCTTTGGTTCCCAAATATTGCGTCTATCTGCTCTCCGCATTGTTTCAGACAGCCAGCCACATAGATCTTTaGAAAATGTCGAAGGCATCG +
Preference number: 5 (lower is better)
Translates to: SLVPKYCVYLLSALFQTASHIDL*KMSKAS
Trigger: CGATGCCTTCGACATTTTCAAAAGATCTATGTGGCT...GGCTGTCTGAAACAATGCGGAGAGCAGATAGACGCAATATTTGGGAACCAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS GCA 90 bp CTGATATTTGGTACCGCAGTCCCGGAGAATGTGAAGAGATCTTTGTaGTTACTCCTTCCTAGTTTTCTTCTTCCTTCTTTGGTAGCTACA +
Preference number: 5 (lower is better)
Translates to: LIFGTAVPENVKRSL*LLLPSFLLPSLVAT
Trigger: TGTAGCTACCAAAGAAGGAAGAAGAAAACTAGGAAGGAGTAAGCACAAAGATCTCTTCACATTCTCCGGGACTGCGGTACCAAATATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473497.5
CDS-3UTR CAA 90 bp GACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATATAGCCATACTTCCCTaGTCATTGGTACTGGCCAAT +
Preference number: 5 (lower is better)
Translates to: DRIWLKWCMMRVKCSRDYIAILP*SLVLAN
Trigger: ATTGGCCAGTACCAATGACAAGGGAAGTATGGCTAT...ATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp CTGGCCTTCAGTTTTCTCATTTGCAAAGATGAGGGGTGCATTAATATCCTAAAATTCTTCTTAGAGCGTTaGATCATGAGCGGGCTTGGC +
Preference number: 5 (lower is better)
Translates to: LAFSFLICKDEGCINILKFFLER*IMSGLG
Trigger: GCCAAGCCCGCTCATGATCAAACGCTCTAAGAAGAA...TTTTAGGATATTAATGCACCCCTCATCTTTGCAAATGAGAAAACTGAAGGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CAA 90 bp CCATTGGTGTTGGATGCATGCCGGAGTGTATGCAGGAGACAGAATTTGGCTAAAAGCAAAATAATAGATTaGAGGCACACAAACTCCTCT +
Preference number: 5 (lower is better)
Translates to: PLVLDACRSVCRRQNLAKSKIID*RHTNSS
Trigger: AGAGGAGTTTGTGTGCCTCAAATCTATTATTTTGCT...TTTAGCCAAATTCTGTCTCCTGCATACACTCCGGCATGCATCCAACACCAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp TTTAAAAAGTGCTTATCAGAGGCAAAATGTCTACTCTCCAGGCCTGGGTCTCTACAAGTTAAAATAGTCTaGCCAACTAGGGGATCTGCC +
Preference number: 5 (lower is better)
Translates to: FKKCLSEAKCLLSRPGSLQVKIV*PTRGSA
Trigger: GGCAGATCCCCTAGTTGGCAAGACTATTTTAACTTG...TAGAGACCCAGGCCTGGAGAGTAGACATTTTGCCTCTGATAAGCACTTTTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp AAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTGGGCTTTGCTACATAAGATaGTCTGTCATTCAGTATCCA +
Preference number: 5 (lower is better)
Translates to: KVVHDEGKMQQGLSEPCGLCYIR*SVIQYP
Trigger: TGGATACTGAATGACAGACAATCTTATGTAGCAAAG...CCCACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp TTTCATAAAAGGATGCATTGCCATAGGAATACAAGAGGGTGCTATAATAAACCCAAGAGATTTCCAAAGTaGCTGGAGACCCCTGGGCGA +
Preference number: 5 (lower is better)
Translates to: FHKRMHCHRNTRGCYNKPKRFPK*LETPGR
Trigger: TCGCCCAGGGGTCTCCAGCAACTTTGGAAATCTCTT...GGGTTTATTATAGCACCCTCTTGTATTCCTATGGCAATGCATCCTTTTATGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp TGCACAGCTCTAAACACACACACTGACGATGGGTTTGGAACATGGCAGCATTTACTCTTCTTAATATATTaGCCATTCCCCAGATTCCTG +
Preference number: 5 (lower is better)
Translates to: CTALNTHTDDGFGTWQHLLFLIY*PFPRFL
Trigger: CAGGAATCTGGGGAATGGCAAATATATTAAGAAGAG...TAAATGCTGCCATGTTCCAAACCCATCGTCAGTGTGTGTGTTTAGAGCTGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp AATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAAGATAGGGTCTTCTCTTaGGATGACCTAGCCTCTCAT +
Preference number: 5 (lower is better)
Translates to: NLAKVVHDEGKMQQGLSEDRVFS*DDLASH
Trigger: ATGAGAGGCTAGGTCATCCAAAGAGAAGACCCTATC...TTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp GCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGTATTTTGCAACCTACATaGATAGGGTCTTCTCTTTGG +
Preference number: 5 (lower is better)
Translates to: AKVVHDEGKMQQGLSEPCILQPT*IGSSLW
Trigger: CCAAAGAGAAGACCCTATCAATGTAGGTTGCAAAAT...ACACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp TGCACAGCTCTAAACACACACACTGACGATGGGTTTGGAACATGGCAGCATTTAATTTTGCAACCTACATaGATAGGGTCTTCTCTTTGG +
Preference number: 5 (lower is better)
Translates to: CTALNTHTDDGFGTWQHLILQPT*IGSSLW
Trigger: CCAAAGAGAAGACCCTATCAATGTAGGTTGCAAAAT...TAAATGCTGCCATGTTCCAAACCCATCGTCAGTGTGTGTGTTTAGAGCTGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp GCAAGGGGGAAAGAGAGCTGTTACAAAGATTTAGCCTTGGAATCCCTTTGGCTGCAAAGAGAATTATGGTaGCCTTTTGAGCTACTGTAT +
Preference number: 5 (lower is better)
Translates to: ARGKESCYKDLALESLWLQRELW*PFELLY
Trigger: ATACAGTAGCTCAAAAGGCAACCATAATTCTCTTTG...CAGCCAAAGGGATTCCAAGGCTAAATCTTTGTAACAGCTCTCTTTCCCCCTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp ATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACGTTCATTTGCTCCAGTaGAGAGTAAGTTTTCAGGGG +
Preference number: 5 (lower is better)
Translates to: IWLKWCMMRVKCSRDYLNVHLLQ*RVSFQG
Trigger: CCCCTGAAAACTTACTCTCAACTGGAGCAAATGAAC...GTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp TTTAAAAAGTGCTTATCAGAGGCAAAATGTCTACTCTCCAGGCCTGGGTCTCTATCATGGGACAATATGTaGTTTCTAGGGTGCACAGCT +
Preference number: 5 (lower is better)
Translates to: FKKCLSEAKCLLSRPGSLSWDNM*FLGCTA
Trigger: AGCTGTGCACCCTAGAAACAACATATTGTCCCATGA...TAGAGACCCAGGCCTGGAGAGTAGACATTTTGCCTCTGATAAGCACTTTTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp TGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTAGTGCACAAAAAGCATaGTTTATCACCTGTGAGAGA +
Preference number: 5 (lower is better)
Translates to: WLKWCMMRVKCSRDYLNRSAQKA*FITCER
Trigger: TCTCTCACAGGTGATAAACAATGCTTTTTGTGCACT...ACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp ACAGCTCTAAACACACACACTGACGATGGGTTTGGAACATGGCAGCATTTACATTCCATCAAACACAATTaGGCATTTGAGCCTTTTCCC +
Preference number: 5 (lower is better)
Translates to: TALNTHTDDGFGTWQHLHSIKHN*AFEPFP
Trigger: GGGAAAAGGCTCAAATGCCAAATTGTGTTTGATGGA...ATGTAAATGCTGCCATGTTCCAAACCCATCGTCAGTGTGTGTGTTTAGAGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp TGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTCCTGCATTTTCAGTTTaGGTAAAATCCGTTCTGAGT +
Preference number: 5 (lower is better)
Translates to: WLKWCMMRVKCSRDYLNRPAFSV*VKSVLS
Trigger: ACTCAGAACGGATTTTACCAAAACTGAAAATGCAGG...ACGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000440973.5
CDS-3UTR CAA 90 bp AACTCTTGGGGACTTTTGAAGATAATGACGAGCATCCGCAGATGCTCTAAGGTTTGGGTAGTCAACAAGTaGCCTTTGTTCTTTCCCTTA +
Preference number: 5 (lower is better)
Translates to: NSWGLLKIMTSIRRCSKVWVVNK*PLFFPL
Trigger: TAAGGGAAAGAACAAAGGCAACTTGTTGACTACCCA...AACCTTAGAGCATCTGCGGATGCTCGTCATTATCTTCAAAAGTCCCCAAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CAA 90 bp TCTTTGGTTCCCAAATATTGCGTCTATCTGCTCTCCGCATTGTTTCAGACAGCCTGGTGTTCCTTTACATaGAGACTTGAGATATCTCGT +
Preference number: 5 (lower is better)
Translates to: SLVPKYCVYLLSALFQTAWCSFT*RLEISR
Trigger: ACGAGATATCTCAAGTCTCAATGTAAAGGAACACCA...GGCTGTCTGAAACAATGCGGAGAGCAGATAGACGCAATATTTGGGAACCAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CAA 90 bp CAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTATACTTCCCTTGTCATaGGTACTGGCCAATCTTTCT +
Preference number: 5 (lower is better)
Translates to: QNLAKVVHDEGKMQQGLSILPLS*VLANLS
Trigger: AGAAAGATTGGCCAGTACCAATGACAAGGGAAGTAT...AGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp GTTTCTGCCCTACTTTCCCTCTTGTTCTCTAGTAGCCACAACAATCCTGCACAAAGCAAAATAATAGATTaGAGGCACACAAACTCCTCT +
Preference number: 5 (lower is better)
Translates to: VSALLSLLFSSSHNNPAQSKIID*RHTNSS
Trigger: AGAGGAGTTTGTGTGCCTCAAATCTATTATTTTGCT...TTGTGCAGGATTGTTGTGGCTACTAGAGAACAAGAGGGAAAGTAGGGCAGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp AAATACAAAGAGATTTCCAAAGTTGCTGGAGACCCCTGGGCGAACATTTCAATCTACAAAGATTTAGCCTaGGAATCCCTTTGGCTGTTC +
Preference number: 5 (lower is better)
Translates to: KYKEISKVAGDPWANISIYKDLA*ESLWLF
Trigger: GAACAGCCAAAGGGATTCCAAGGCTAAATCTTTGTA...GATTGAAATGTTCGCCCAGGGGTCTCCAGCAACTTTGGAAATCTCTTTGTATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp GGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATCTTTGCTACATAAGATaGTCTGTCATTCAGTATCCA +
Preference number: 5 (lower is better)
Translates to: GDRIWLKWCMMRVKCSRDLCYIR*SVIQYP
Trigger: TGGATACTGAATGACAGACAATCTTATGTAGCAAAG...ATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp AGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGACCACTGTATAATTGTTaGGCTTTAGCTGGTATTACA +
Preference number: 5 (lower is better)
Translates to: RRQNLAKVVHDEGKMQQGPLYNC*ALAGIT
Trigger: TGTAATACCAGCTAAAGCCAAACAATTATACAGTGG...TCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp AGGAGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGACAAAGAGAATTATGGTaGCCTTTTGAGCTACTGTAT +
Preference number: 5 (lower is better)
Translates to: RRQNLAKVVHDEGKMQQGQRELW*PFELLY
Trigger: ATACAGTAGCTCAAAAGGCAACCATAATTCTCTTTG...TCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp TTTAAAAAGTGCTTATCAGAGGCAAAATGTCTACTCTCCAGGCCTGGGTCTCTATTTCAGGGGATTAACTaGGGAATGGTGCAGTGTAAT +
Preference number: 5 (lower is better)
Translates to: FKKCLSEAKCLLSRPGSLFQGIN*GMVQCN
Trigger: ATTACACTGCACCATTCCCAAGTTAATCCCCTGAAA...TAGAGACCCAGGCCTGGAGAGTAGACATTTTGCCTCTGATAAGCACTTTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp AGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCCATCAAACACAATTaGGCATTTGAGCCTTTTCCC +
Preference number: 5 (lower is better)
Translates to: RQNLAKVVHDEGKMQQGLSIKHN*AFEPFP
Trigger: GGGAAAAGGCTCAAATGCCAAATTGTGTTTGATGGA...TAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp TTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAACCGTGCAAATATATGTTTTaGTGCTTTGAAAGACCCCCA +
Preference number: 5 (lower is better)
Translates to: LAKVVHDEGKMQQGLSEPCKYMF*CFERPP
Trigger: TGGGGGTCTTTCAAAGCACAAAAACATATATTTGCA...CGGTTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS-3UTR CAA 90 bp TCTTTGGTTCCCAAATATTGCGTCTATCTGCTCTCCGCATTGTTTCAGACAGCCACACGAGGAAACCACTaGTTTCCAAATATTTTAGGA +
Preference number: 5 (lower is better)
Translates to: SLVPKYCVYLLSALFQTATRGNH*FPNILG
Trigger: TCCTAAAATATTTGGAAACAAGTGGTTTCCTCGTGT...GGCTGTCTGAAACAATGCGGAGAGCAGATAGACGCAATATTTGGGAACCAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CAA 90 bp CCTACATATGAATTGATGCCAATAGGTACTGAACACCTACTAAATTTAGGCCCTAAATGCAAAATTGCCTaGGGCACCTTAGGTCTCTGG +
Preference number: 5 (lower is better)
Translates to: PTYELMPIGTEHLLNLGPKCKIA*GTLGLW
Trigger: CCAGAGACCTAAGGTGCCCAAGGCAATTTTGCATTT...AGGGCCTAAATTTAGTAGGTGTTCAGTACCTATTGGCATCAATTCATATGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CAA 90 bp CCTAACTTGATTCTGGAAACTTGTCTCCTGAACCATATATCCAGGAAACACTGGATCTCGTGTTTAATCTaGCACTGGTCCAGCAAATTG +
Preference number: 5 (lower is better)
Translates to: PNLILETCLLNHISRKHWISCLI*HWSSKL
Trigger: CAATTTGCTGGACCAGTGCAAGATTAAACACGAGAT...CCAGTGTTTCCTGGATATATGGTTCAGGAGACAAGTTTCCAGAATCAAGTTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS GCA 90 bp GATGGTTCAAAGTTCAGATTAAAATCTACATCCTTTTTCAAGAAGTaGTGTGCTGATATTTGGTACCGCAGTCCCGGAGAATGTGAAGAG +
Preference number: 5 (lower is better)
Translates to: DGSKFRLKSTSFFKK*CADIWYRSPGECEE
Trigger: CTCTTCACATTCTCCGGGACTGCGGTACCAAATATCAGCACAGCACTTCTTGAAAAAGGATGTAGATTTTAATCTGAACTTTGAACCATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404742.5
ENST00000440973.5
ENST00000473497.5
CDS-3UTR CAA 90 bp AATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTGAATTAACTAAGATCAACTaGCTGCTCTCCATAGGTCCA +
Preference number: 5 (lower is better)
Translates to: NLAKVVHDEGKMQQGLSELTKIN*LLSIGP
Trigger: TGGACCTATGGAGAGCAGCAAGTTGATCTTAGTTAA...TTCAGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp TTTCATAAAAGGATGCATTGCCATAGGAATACAAGAGGGTGCTATAATAAACCCACACTGACGATGGGTTaGGAACATGGCAGCATTTAC +
Preference number: 5 (lower is better)
Translates to: FHKRMHCHRNTRGCYNKPTLTMG*EHGSIY
Trigger: GTAAATGCTGCCATGTTCCAAACCCATCGTCAGTGT...GGGTTTATTATAGCACCCTCTTGTATTCCTATGGCAATGCATCCTTTTATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp AGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTAAATAGGTTGAGAAAATaGTTTACAGGTGCTCGAGCA +
Preference number: 5 (lower is better)
Translates to: RQNLAKVVHDEGKMQQGLNRLRK*FTGARA
Trigger: TGCTCGAGCACCTGTAAACAATTTTCTCAACCTATT...TAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp TCTACTGAACCCTGGTGCACACCCAGAATTAACCATTTTCCTCCAAATACTTTCAATAGGTTGAGAAAATaGTTTACAGGTGCTCGAGCA +
Preference number: 5 (lower is better)
Translates to: STEPWCTPRINHFPPNTFNRLRK*FTGARA
Trigger: TGCTCGAGCACCTGTAAACAATTTTCTCAACCTATT...GAAAGTATTTGGAGGAAAATGGTTAATTCTGGGTGTGCACCAGGGTTCAGTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp CTGGCCTTCAGTTTTCTCATTTGCAAAGATGAGGGGTGCATTAATATCCTAAAACACTGGTCCAGCAAATaGGAAAGGTTATTGCAGAAG +
Preference number: 5 (lower is better)
Translates to: LAFSFLICKDEGCINILKHWSSK*ERLLQK
Trigger: CTTCTGCAATAACCTTTCCAATTTGCTGGACCAGTG...TTTTAGGATATTAATGCACCCCTCATCTTTGCAAATGAGAAAACTGAAGGCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CAA 90 bp CACTCTTTGGTTCCCAAATATTGCGTCTATCTGCTCTCCGCATTGTTTCAGACAAGATCAGTTCTTTGGTaGATACAAATGATAGTGACG +
Preference number: 5 (lower is better)
Translates to: HSLVPKYCVYLLSALFQTRSVLW*IQMIVT
Trigger: CGTCACTATCATTTGTATCAACCAAAGAACTGATCT...TGTCTGAAACAATGCGGAGAGCAGATAGACGCAATATTTGGGAACCAAAGAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS CCA 90 bp AGATTAAAATCTACATCCTTTTTCAAGAAGTGCTGTGCTGATATTTaGTACCGCAGTCCCGGAGAATGTGAAGAGATCTTTGTGCTTACT +
Preference number: 5 (lower is better)
Translates to: RLKSTSFFKKCCADI*YRSPGECEEIFVLT
Trigger: AGTAAGCACAAAGATCTCTTCACATTCTCCGGGACTGCGGTACCAAATATCAGCACAGCACTTCTTGAAAAAGGATGTAGATTTTAATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404742.5
ENST00000440973.5
ENST00000473497.5
CDS-3UTR CAA 90 bp TATGGTTGCCTTTTGAGCTACTGTATGACTCTATTTGCCTTTCACATAACTAGCTTAACTAAGATCAACTaGCTGCTCTCCATAGGTCCA +
Preference number: 5 (lower is better)
Translates to: YGCLLSYCMTLFAFHITSLTKIN*LLSIGP
Trigger: TGGACCTATGGAGAGCAGCAAGTTGATCTTAGTTAA...GCTAGTTATGTGAAAGGCAAATAGAGTCATACAGTAGCTCAAAAGGCAACCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp AGACAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTACCACTGTATAATTGTTaGGCTTTAGCTGGTATTACA +
Preference number: 5 (lower is better)
Translates to: RQNLAKVVHDEGKMQQGLPLYNC*ALAGIT
Trigger: TGTAATACCAGCTAAAGCCAAACAATTATACAGTGG...TAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp CAGAATTTGGCTAAAGTGGTGCATGATGAGGGTAAAATGCAGCAGGGATTATCTCCACTGTATAATTGTTaGGCTTTAGCTGGTATTACA +
Preference number: 5 (lower is better)
Translates to: QNLAKVVHDEGKMQQGLSPLYNC*ALAGIT
Trigger: TGTAATACCAGCTAAAGCCAAACAATTATACAGTGG...AGATAATCCCTGCTGCATTTTACCCTCATCATGCACCACTTTAGCCAAATTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp TTTCATAAAAGGATGCATTGCCATAGGAATACAAGAGGGTGCTATAATAAACCCGGGACCAAAGTTCATTaGCTCCAGTTGAGAGTAAGT +
Preference number: 5 (lower is better)
Translates to: FHKRMHCHRNTRGCYNKPGTKVH*LQLRVS
Trigger: ACTTACTCTCAACTGGAGCAAATGAACTTTGGTCCC...GGGTTTATTATAGCACCCTCTTGTATTCCTATGGCAATGCATCCTTTTATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp ACAGTTGACAAACAGGAGCTATTCAGCTCTGTCAGATTGTACTATCAATTATATATTTGGCCTTCGCCATaGAAGTCACAAAGTGGTCTC +
Preference number: 5 (lower is better)
Translates to: TVDKQELFSSVRLYYQLYIWPSP*KSQSGL
Trigger: GAGACCACTTTGTGACTTCAATGGCGAAGGCCAAAT...ATATAATTGATAGTACAATCTGACAGAGCTGAATAGCTCCTGTTTGTCAACTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CAA 90 bp TCCTTCAACAGACTCCAACATAGGAGTCCACATTCTGTAAATGGTGACATTTTTAACTCTTGGGGACTTTaGAAGATAATGACGAGCATC +
Preference number: 5 (lower is better)
Translates to: SFNRLQHRSPHSVNGDIFNSWGL*KIMTSI
Trigger: GATGCTCGTCATTATCTTCAAAAGTCCCCAAGAGTT...AAAAATGTCACCATTTACAGAATGTGGACTCCTATGTTGGAGTCTGTTGAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CAA 90 bp CTGGCCTTCAGTTTTCTCATTTGCAAAGATGAGGGGTGCATTAATATCCTAAAATCAGGATTCTCTTCTTaGCTTCTACATGTGAGATAC +
Preference number: 5 (lower is better)
Translates to: LAFSFLICKDEGCINILKSGFSS*LLHVRY
Trigger: GTATCTCACATGTAGAAGCAAAGAAGAGAATCCTGA...TTTTAGGATATTAATGCACCCCTCATCTTTGCAAATGAGAAAACTGAAGGCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CAA 90 bp ATTCCTTCGAGGATACCAGAGATCAGTTCTTTGGTTGATACAAATGATAGTGACGCCCTTGTTTTGATCTaGATCTTTGACCTAATTGCA +
Preference number: 5 (lower is better)
Translates to: IPSRIPEISSLVDTNDSDALVLI*IFDLIA
Trigger: TGCAATTAGGTCAAAGATCAAGATCAAAACAAGGGC...GTCACTATCATTTGTATCAACCAAAGAACTGATCTCTGGTATCCTCGAAGGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CAA 90 bp ACAGTTGACAAACAGGAGCTATTCAGCTCTGTCAGATTGTACTATCAATTATATCTCCTTATCCCGCAATaGTCTAGGTATTTTGGGACA +
Preference number: 5 (lower is better)
Translates to: TVDKQELFSSVRLYYQLYLLIPQ*SRYFGT
Trigger: TGTCCCAAAATACCTAGACAATTGCGGGATAAGGAG...ATATAATTGATAGTACAATCTGACAGAGCTGAATAGCTCCTGTTTGTCAACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CAA 90 bp CCTACATATGAATTGATGCCAATAGGTACTGAACACCTACTAAATTTAGGCCCTACTACTGCAACTGAGTaGAAATTGACAGCTAGAAAG +
Preference number: 5 (lower is better)
Translates to: PTYELMPIGTEHLLNLGPTTATE*KLTARK
Trigger: CTTTCTAGCTGTCAATTTCAACTCAGTTGCAGTAGT...AGGGCCTAAATTTAGTAGGTGTTCAGTACCTATTGGCATCAATTCATATGTAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CAA 90 bp CATATAAAAGCTTTAAGGTGTACCACTTTCATAAAAGGATGCATTGCCATAGGAATAGGTCAAAGGAAATaGAAGGAAATGAGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: HIKALRCTTFIKGCIAIGIGQRK*KEMSWQ
Trigger: CTGCCAGCTCATTTCCTTCAATTTCCTTTGACCTAT...TCCTATGGCAATGCATCCTTTTATGAAAGTGGTACACCTTAAAGCTTTTATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp TCCTTCAACAGACTCCAACATAGGAGTCCACATTCTGTAAATGGTGACATTTTTAACAAGACAGGCAGTTaGAGAAATTTATCACATGCT +
Preference number: 5 (lower is better)
Translates to: SFNRLQHRSPHSVNGDIFNKTGS*RNLSHA
Trigger: AGCATGTGATAAATTTCTCAAACTGCCTGTCTTGTT...AAAAATGTCACCATTTACAGAATGTGGACTCCTATGTTGGAGTCTGTTGAAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CAA 90 bp CCTACATATGAATTGATGCCAATAGGTACTGAACACCTACTAAATTTAGGCCCTCCAGAGATCAGTTCTTaGGTTGATACAAATGATAGT +
Preference number: 5 (lower is better)
Translates to: PTYELMPIGTEHLLNLGPPEISS*VDTNDS
Trigger: ACTATCATTTGTATCAACCAAAGAACTGATCTCTGG...AGGGCCTAAATTTAGTAGGTGTTCAGTACCTATTGGCATCAATTCATATGTAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS-3UTR CAA 90 bp CATATAAAAGCTTTAAGGTGTACCACTTTCATAAAAGGATGCATTGCCATAGGACTCTTCTTAATATATTaGCCATTCCCCAGATTCCTG +
Preference number: 5 (lower is better)
Translates to: HIKALRCTTFIKGCIAIGLFLIY*PFPRFL
Trigger: CAGGAATCTGGGGAATGGCAAATATATTAAGAAGAG...TCCTATGGCAATGCATCCTTTTATGAAAGTGGTACACCTTAAAGCTTTTATATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp TTTCATAAAAGGATGCATTGCCATAGGAATACAAGAGGGTGCTATAATAAACCCCAAAGAGAATTATGGTaGCCTTTTGAGCTACTGTAT +
Preference number: 5 (lower is better)
Translates to: FHKRMHCHRNTRGCYNKPQRELW*PFELLY
Trigger: ATACAGTAGCTCAAAAGGCAACCATAATTCTCTTTG...GGGTTTATTATAGCACCCTCTTGTATTCCTATGGCAATGCATCCTTTTATGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000206249.8
ENST00000440973.5
ENST00000443427.5
CDS-3UTR CAA 90 bp ACAGTTGACAAACAGGAGCTATTCAGCTCTGTCAGATTGTACTATCAATTATATAGCAAAATAATAGATTaGAGGCACACAAACTCCTCT +
Preference number: 5 (lower is better)
Translates to: TVDKQELFSSVRLYYQLYSKIID*RHTNSS
Trigger: AGAGGAGTTTGTGTGCCTCAAATCTATTATTTTGCT...ATATAATTGATAGTACAATCTGACAGAGCTGAATAGCTCCTGTTTGTCAACTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS CCA 72 bp ATGCCGGCGGGCCGGCCTCGCGCACCGTGTAGCCGCTaGGCTCGTTCTCCAGGTAGTAGGGCACCTGCTGGC +
Preference number: 6 (lower is better)
Translates to: MPAGRPRAPCSR*ARSPGSRAPAG
Trigger: GCCAGCAGGTGCCCTACTACCTGGAGAACGAGCCCAGCGGCTACACGGTGCGCGAGGCCGGCCCGCCGGCAT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000406599.5
ENST00000440973.5
ENST00000443427.5
ENST00000456483.3
ENST00000488573.1
CDS GCA 72 bp CGGCGCCCTCGGGGTAGTTGTACACGGCGGGCTTGCTaGTGTCCAGGTACACCTCGCCCAGGGGCCGCTCCA +
Preference number: 6 (lower is better)
Translates to: RRPRGSCTRRAC*CPGTPRPGAAP
Trigger: TGGAGCGGCCCCTGGGCGAGGTGTACCTGGACAGCAGCAAGCCCGCCGTGTACAACTACCCCGAGGGCGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000404742.5
ENST00000406599.5
ENST00000440973.5
ENST00000443427.5
ENST00000446550.1
ENST00000456483.3
CDS GCA 72 bp AGGCGGCGCCCTCGGGGTAGTTGTACACGGCGGGCTTaGTGCTGTCCAGGTACACCTCGCCCAGGGGCCGCT +
Preference number: 6 (lower is better)
Translates to: RRRPRGSCTRRA*CCPGTPRPGAA
Trigger: AGCGGCCCCTGGGCGAGGTGTACCTGGACAGCAGCAAGCCCGCCGTGTACAACTACCCCGAGGGCGCCGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000404742.5
ENST00000406599.5
ENST00000440973.5
ENST00000443427.5
ENST00000446550.1
ENST00000456483.3
CDS TCA 72 bp GACCGTAGACCTGCGCGTTGGCGGCGGCCGCGGCGTTaGACTCGTAGGCGGCGCCCTCGGGGTAGTTGTACA +
Preference number: 6 (lower is better)
Translates to: DRRPARWRRPRR*TRRRRPRGSCT
Trigger: TGTACAACTACCCCGAGGGCGCCGCCTACGAGTTCAACGCCGCGGCCGCCGCCAACGCGCAGGTCTACGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000404742.5
ENST00000406599.5
ENST00000440973.5
ENST00000443427.5
ENST00000446550.1
ENST00000456483.3
CDS CCA 72 bp GCAGGGATTCGGGAAGCAGCCAGTAGGCAGGGCACTTaGCAGCCCCTCCCGGCAGACACGCAGCTGGGCTAC +
Preference number: 6 (lower is better)
Translates to: AGIREAASRQGT*QPLPADTQLGY
Trigger: GTAGCCCAGCTGCGTGTCTGCCGGGAGGGGCTGCCAAGTGCCCTGCCTACTGGCTGCTTCCCGAATCCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS CCA 72 bp AGATGCTTTGGTGTGGAGGGTCATGGTCATGGTCCGTaGCCGCGGGCAGGGTGCAGACCGTGTCCCCGCAGG +
Preference number: 6 (lower is better)
Translates to: RCFGVEGHGHGP*PRAGCRPCPRR
Trigger: CCTGCGGGGACACGGTCTGCACCCTGCCCGCGGCCACGGACCATGACCATGACCCTCCACACCAAAGCATCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000404742.5
ENST00000406599.5
ENST00000440973.5
ENST00000443427.5
ENST00000446550.1
ENST00000456483.3
CDS CCA 72 bp AGGGCACTTGGCAGCCCCTCCCGGCAGACACGCAGCTaGGCTACTGCACAGCGCTGGATGAATGGCAGTGGG +
Preference number: 6 (lower is better)
Translates to: RALGSPSRQTRS*ATAQRWMNGSG
Trigger: CCCACTGCCATTCATCCAGCGCTGTGCAGTAGCCCAGCTGCGTGTCTGCCGGGAGGGGCTGCCAAGTGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS CCA 72 bp CCATCCCAGATGCTTTGGTGTGGAGGGTCATGGTCATaGTCCGTGGCCGCGGGCAGGGTGCAGACCGTGTCC +
Preference number: 6 (lower is better)
Translates to: PSQMLWCGGSWS*SVAAGRVQTVS
Trigger: GGACACGGTCTGCACCCTGCCCGCGGCCACGGACCATGACCATGACCCTCCACACCAAAGCATCTGGGATGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000404742.5
ENST00000406599.5
ENST00000440973.5
ENST00000443427.5
ENST00000446550.1
ENST00000456483.3
CDS CCA 72 bp GTAGGGCCATCCCAGATGCTTTGGTGTGGAGGGTCATaGTCATGGTCCGTGGCCGCGGGCAGGGTGCAGACC +
Preference number: 6 (lower is better)
Translates to: VGPSQMLWCGGS*SWSVAAGRVQT
Trigger: GGTCTGCACCCTGCCCGCGGCCACGGACCATGACCATGACCCTCCACACCAAAGCATCTGGGATGGCCCTAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000404742.5
ENST00000406599.5
ENST00000440973.5
ENST00000443427.5
ENST00000446550.1
ENST00000456483.3
CDS CCA 72 bp CAGAAACCGGCGGGCCACTTTACTTGTCGTCGCTGCTaGATAGAGGCTGAGTTTCACGGCCAGGGGGCGGGG +
Preference number: 6 (lower is better)
Translates to: QKPAGHFTCRRC*IEAEFHGQGAG
Trigger: CCCCGCCCCCTGGCCGTGAAACTCAGCCTCTATCCAGCAGCGACGACAAGTAAAGTGGCCCGCCGGTTTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000443427.5
ENST00000446550.1
CDS GCA 72 bp GCTCAGAAACCGGCGGGCCACTTTACTTGTCGTCGCTaGTGGATAGAGGCTGAGTTTCACGGCCAGGGGGCG +
Preference number: 6 (lower is better)
Translates to: AQKPAGHFTCRR*WIEAEFHGQGA
Trigger: CGCCCCCTGGCCGTGAAACTCAGCCTCTATCCAGCAGCGACGACAAGTAAAGTGGCCCGCCGGTTTCTGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000443427.5
ENST00000446550.1
CDS TCA 72 bp GAACATCCAGTGGGACACTCGGGAGGACAGTCCACATaGCAGCACCATTCTGTAGAATGCCGGCGGGCCGGC +
Preference number: 6 (lower is better)
Translates to: EHPVGHSGGQST*QHHSVECRRAG
Trigger: GCCGGCCCGCCGGCATTCTACAGAATGGTGCTGTCATGTGGACTGTCCTCCCGAGTGTCCCACTGGATGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488573.1
CDS CCA 72 bp ATCGGGGGCTCAGCATCCAACAAGGCACTGACCATCTaGTCGGCCGTCAGGGACAAGGCCAGGCTGTTCTTC +
Preference number: 6 (lower is better)
Translates to: IGGSASNKALTI*SAVRDKARLFF
Trigger: GAAGAACAGCCTGGCCTTGTCCCTGACGGCCGACCAGATGGTCAGTGCCTTGTTGGATGCTGAGCCCCCGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000427531.6
ENST00000440973.5
ENST00000443427.5
ENST00000482101.1
ENST00000641399.1
CDS CCA 72 bp TTCGCCATTGAAGTCACAAAGTGGTCTCCTGTGTCCTaGACCGGCCGCGCTCCTTCCACAGTGGCTGCGAGG +
Preference number: 6 (lower is better)
Translates to: FAIEVTKWSPVS*TGRAPSTVAAR
Trigger: CCTCGCAGCCACTGTGGAAGGAGCGCGGCCGGTCCAGGACACAGGAGACCACTTTGTGACTTCAATGGCGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS TCA 72 bp GGACGGTTCAGGGGCTCCAGCTCGTTCCCTTGGATCTaGTGCAGTAGGGCCATCCCAGATGCTTTGGTGTGG +
Preference number: 6 (lower is better)
Translates to: GRFRGSSSFPWI*CSRAIPDALVW
Trigger: CCACACCAAAGCATCTGGGATGGCCCTACTGCATCAGATCCAAGGGAACGAGCTGGAGCCCCTGAACCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000404742.5
ENST00000406599.5
ENST00000440973.5
ENST00000443427.5
ENST00000446550.1
ENST00000456483.3
CDS CCA 72 bp CTTGGATCTGATGCAGTAGGGCCATCCCAGATGCTTTaGTGTGGAGGGTCATGGTCATGGTCCGTGGCCGCG +
Preference number: 6 (lower is better)
Translates to: LGSDAVGPSQML*CGGSWSWSVAA
Trigger: CGCGGCCACGGACCATGACCATGACCCTCCACACCAAAGCATCTGGGATGGCCCTACTGCATCAGATCCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000404742.5
ENST00000406599.5
ENST00000440973.5
ENST00000443427.5
ENST00000446550.1
ENST00000456483.3
CDS CAA 90 bp TACTGCACAGCGCTGGATGAATGGCAGTGGGGAGTGAGGGGAGACTaGCTGTCTGCTCACAGGGAGCAGTGTGGCACAGCCAGAGAAAGC +
Preference number: 6 (lower is better)
Translates to: YCTALDEWQWGVRGD*LSAHREQCGTARES
Trigger: GCTTTCTCTGGCTGTGCCACACTGCTCCCTGTGAGCAGACAGCAAGTCTCCCCTCACTCCCCACTGCCATTCATCCAGCGCTGTGCAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS CCA 72 bp GAGGGGAGACTTGCTGTCTGCTCACAGGGAGCAGTGTaGCACAGCCAGAGAAAGCTGTACTGGGGAGGAGAA +
Preference number: 6 (lower is better)
Translates to: EGRLAVCSQGAV*HSQRKLYWGGE
Trigger: TTCTCCTCCCCAGTACAGCTTTCTCTGGCTGTGCCACACTGCTCCCTGTGAGCAGACAGCAAGTCTCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS CAA 90 bp TGGTCGGCCGTCAGGGACAAGGCCAGGCTGTTCTTCTTAGAGCGTTaGATCATGAGCGGGCTTGGCCAAAGGTTGGCAGCTCTCATGTCT +
Preference number: 6 (lower is better)
Translates to: WSAVRDKARLFFLER*IMSGLGQRLAALMS
Trigger: AGACATGAGAGCTGCCAACCTTTGGCCAAGCCCGCTCATGATCAAACGCTCTAAGAAGAACAGCCTGGCCTTGTCCCTGACGGCCGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000427531.6
ENST00000440973.5
ENST00000443427.5
ENST00000482101.1
ENST00000641399.1
CDS TCA 72 bp GGATCAAATGCCTTACTGGCCCTAGCCCCCAGTCTCTaGACAGAGGCATTGCCATGCCTCCGATTGCACCAG +
Preference number: 6 (lower is better)
Translates to: GSNALLALAPSL*TEALPCLRLHQ
Trigger: CTGGTGCAATCGGAGGCATGGCAATGCCTCTGTTCAGAGACTGGGGGCTAGGGCCAGTAAGGCATTTGATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS GCA 72 bp GCGAAAGACGGATCCAGGGGCCGGCTTTCTCTAATGTaGTGCCTTATGTGCCCCGTGCCAGACTCCGATATA +
Preference number: 6 (lower is better)
Translates to: AKDGSRGRLSLM*CLMCPVPDSDI
Trigger: TATATCGGAGTCTGGCACGGGGCACATAAGGCAGCACATTAGAGAAAGCCGGCCCCTGGATCCGTCTTTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443427.5
ENST00000446550.1
CDS TCA 72 bp ACAAAGCCTGGCACCCTCTTCGCCCAGTTGATCATGTaGACCAGCTCCCTGTCTGCCAGGTTGGTCAGTAAG +
Preference number: 6 (lower is better)
Translates to: TKPGTLFAQLIM*TSSLSARLVSK
Trigger: CTTACTGACCAACCTGGCAGACAGGGAGCTGGTTCACATGATCAACTGGGCGAAGAGGGTGCCAGGCTTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000427531.6
ENST00000440973.5
ENST00000443427.5
ENST00000641399.1
CDS TCA 72 bp TCAAATCCACAAAGCCTGGCACCCTCTTCGCCCAGTTaGTCATGTGAACCAGCTCCCTGTCTGCCAGGTTGG +
Preference number: 6 (lower is better)
Translates to: SNPQSLAPSSPS*SCEPAPCLPGW
Trigger: CCAACCTGGCAGACAGGGAGCTGGTTCACATGATCAACTGGGCGAAGAGGGTGCCAGGCTTTGTGGATTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000427531.6
ENST00000440973.5
ENST00000443427.5
ENST00000641399.1
CDS TCA 72 bp CTCCTAGAGTGCCCACGCTCAGGGTCCCAGGACACATaGCACCCAATGGAGGCTTTGTTGCCAGACATTAGT +
Preference number: 6 (lower is better)
Translates to: LLECPRSGSQDT*HPMEALLPDIS
Trigger: ACTAATGTCTGGCAACAAAGCCTCCATTGGGTGTCATGTGTCCTGGGACCCTGAGCGTGGGCACTCTAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS CCA 72 bp TATCTGAATTTGGCCTTCGCCATTGAAGTCACAAAGTaGTCTCCTGTGTCCTGGACCGGCCGCGCTCCTTCC +
Preference number: 6 (lower is better)
Translates to: YLNLAFAIEVTK*SPVSWTGRAPS
Trigger: GGAAGGAGCGCGGCCGGTCCAGGACACAGGAGACCACTTTGTGACTTCAATGGCGAAGGCCAAATTCAGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS TCA 72 bp ATCCTTTCTGGCACCCTCTTCGCCCAGTTGATCATGTaGACCAGCTCCCTGTCTGCCAGGTTGGTCAGTAAG +
Preference number: 6 (lower is better)
Translates to: ILSGTLFAQLIM*TSSLSARLVSK
Trigger: CTTACTGACCAACCTGGCAGACAGGGAGCTGGTTCACATGATCAACTGGGCGAAGAGGGTGCCAGAAAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482101.1
CDS GCA 72 bp AAGAGCAAGTTAGGAGCAAACAGTAGCTTCCCTGGGTaGTCCATGGAGCGCCAGACGAGACCAATCATCAGG +
Preference number: 6 (lower is better)
Translates to: KSKLGANSSFPG*SMERQTRPIIR
Trigger: CCTGATGATTGGTCTCGTCTGGCGCTCCATGGAGCACCCAGGGAAGCTACTGTTTGCTCCTAACTTGCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000415488.1
ENST00000427531.6
ENST00000440973.5
ENST00000443427.5
ENST00000641399.1
CDS GCA 72 bp TCCAGGGGCCGGCTTTCTCTAATGTGCTGCCTTATGTaGCCCGTGCCAGACTCCGATATATCTCTGTTTGTC +
Preference number: 6 (lower is better)
Translates to: SRGRLSLMCCLM*PVPDSDISLFV
Trigger: GACAAACAGAGATATATCGGAGTCTGGCACGGGGCACATAAGGCAGCACATTAGAGAAAGCCGGCCCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443427.5
ENST00000446550.1
CDS GCA 72 bp AAAGACGGATCCAGGGGCCGGCTTTCTCTAATGTGCTaGCTTATGTGCCCCGTGCCAGACTCCGATATATCT +
Preference number: 6 (lower is better)
Translates to: KDGSRGRLSLMC*LMCPVPDSDIS
Trigger: AGATATATCGGAGTCTGGCACGGGGCACATAAGGCAGCACATTAGAGAAAGCCGGCCCCTGGATCCGTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443427.5
ENST00000446550.1
CDS TCA 72 bp AGGATCTCTAGCCAGGCACATTCTAGAAGGTGGACCTaGTCATGGAGGGTCAAATCCACAAAGCCTGGCACC +
Preference number: 6 (lower is better)
Translates to: RISSQAHSRRWT*SWRVKSTKPGT
Trigger: GGTGCCAGGCTTTGTGGATTTGACCCTCCATGATCAGGTCCACCTTCTAGAATGTGCCTGGCTAGAGATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000427531.6
ENST00000440973.5
ENST00000443427.5
ENST00000641399.1
CDS TCA 72 bp AACTATTCTCTCGGCCATAGTACTAACACGCAATACTaGGGTGCTCCTAGAGTGCCCACGCTCAGGGTCCCA +
Preference number: 6 (lower is better)
Translates to: NYSLGHSTNTQY*GAPRVPTLRVP
Trigger: TGGGACCCTGAGCGTGGGCACTCTAGGAGCACCTCAGTATTGCGTGTTAGTACTATGGCCGAGAGAATAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS TCA 72 bp ATATATCCATCCTTTCTGGCACCCTCTTCGCCCAGTTaGTCATGTGAACCAGCTCCCTGTCTGCCAGGTTGG +
Preference number: 6 (lower is better)
Translates to: IYPSFLAPSSPS*SCEPAPCLPGW
Trigger: CCAACCTGGCAGACAGGGAGCTGGTTCACATGATCAACTGGGCGAAGAGGGTGCCAGAAAGGATGGATATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482101.1
CDS TCA 72 bp TCCCAGCACCAGTTATGTCTTTTGCAAGGAATGCGATaGAGTAGAGCCCGCAGTGGCCAAGTGGCTTTGGTC +
Preference number: 6 (lower is better)
Translates to: SQHQLCLLQGMR*SRARSGQVALV
Trigger: GACCAAAGCCACTTGGCCACTGCGGGCTCTACTTCATCGCATTCCTTGCAAAAGACATAACTGGTGCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641399.1
CDS GCA 72 bp ACCCTTGGAGGCTGGAAAGTACCCTATGCTTTCTGCTaGCACCCCAAGCAAGAGGAAAAACAGGCTTGCTGT +
Preference number: 6 (lower is better)
Translates to: TLGGWKVPYAFC*HPKQEEKQACC
Trigger: ACAGCAAGCCTGTTTTTCCTCTTGCTTGGGGTGGCAGCAGAAAGCATAGGGTACTTTCCAGCCTCCAAGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS CAA 72 bp TCCTTGGCAGATTCCATAGCCATACTTCCCTTGTCATaGGTACTGGCCAATCTTTCTCTGCCACCCTGGCGT +
Preference number: 6 (lower is better)
Translates to: SLADSIAILPLS*VLANLSLPPWR
Trigger: ACGCCAGGGTGGCAGAGAAAGATTGGCCAGTACCAATGACAAGGGAAGTATGGCTATGGAATCTGCCAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000427531.6
ENST00000440973.5
ENST00000443427.5
CDS CAA 72 bp CGAGTCTCCTTGGCAGATTCCATAGCCATACTTCCCTaGTCATTGGTACTGGCCAATCTTTCTCTGCCACCC +
Preference number: 6 (lower is better)
Translates to: RVSLADSIAILP*SLVLANLSLPP
Trigger: GGGTGGCAGAGAAAGATTGGCCAGTACCAATGACAAGGGAAGTATGGCTATGGAATCTGCCAAGGAGACTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000427531.6
ENST00000440973.5
ENST00000443427.5
CDS TCA 72 bp AGGATCTCTAGCCAGGCACATTCTAGAAGGTGGACCTaGTCATGGAGGGTCAAATCCACAAAGCCACCTTTC +
Preference number: 6 (lower is better)
Translates to: RISSQAHSRRWT*SWRVKSTKPPF
Trigger: GAAAGGTGGCTTTGTGGATTTGACCCTCCATGATCAGGTCCACCTTCTAGAATGTGCCTGGCTAGAGATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415488.1
CDS TCA 72 bp CGTCCACACACGGATTTGATGATCTGCAGGATACTGTaGGGCCTTATGACCAGAGGCTTTAGACACGAGGAA +
Preference number: 6 (lower is better)
Translates to: RPHTDLMICRIL*GLMTRGFRHEE
Trigger: TTCCTCGTGTCTAAAGCCTCTGGTCATAAGGCCTCACAGTATCCTGCAGATCATCAAATCCGTGTGTGGACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS TCA 72 bp AGAATCTTTCAAGATGGACCAGGCTGTTCTTGCCTGTaGGTTGTCTGTCTGTGCGCCTCATCTTCAGGGAGA +
Preference number: 6 (lower is better)
Translates to: RIFQDGPGCSCL*VVCLCASSSGR
Trigger: TCTCCCTGAAGATGAGGCGCACAGACAGACAACTCACAGGCAAGAACAGCCTGGTCCATCTTGAAAGATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482101.1
CDS CCA 72 bp ATGACTCTAATCACAATGCCAGGAGTGGCCGGTCTCTaGCCCTGGGACACTATGCAGTTACTGAGAGATTTA +
Preference number: 6 (lower is better)
Translates to: MTLITMPGVAGL*PWDTMQLLRDL
Trigger: TAAATCTCTCAGTAACTGCATAGTGTCCCAGGGCCAGAGACCGGCCACTCCTGGCATTGTGATTAGAGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS CCA 72 bp GGGAACGAGGTCTCTCATTTCCCAGTGGCGTTCACATaGATCCACCTCTTGACCACTTTCTCAACTATTCTC +
Preference number: 6 (lower is better)
Translates to: GNEVSHFPVAFT*IHLLTTFSTIL
Trigger: GAGAATAGTTGAGAAAGTGGTCAAGAGGTGGATCCATGTGAACGCCACTGGGAAATGAGAGACCTCGTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS CCA 72 bp ACTGATTTTAGGCTTTCGAGTTGCACTGACCGTGATTaGGAACGAGGTCTCTCATTTCCCAGTGGCGTTCAC +
Preference number: 6 (lower is better)
Translates to: TDFRLSSCTDRD*ERGLSFPSGVH
Trigger: GTGAACGCCACTGGGAAATGAGAGACCTCGTTCCCAATCACGGTCAGTGCAACTCGAAAGCCTAAAATCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS CAA 90 bp AACGAGGTCTCTCATTTCCCAGTGGCGTTCACATGGATCCACCTCTaGACCACTTTCTCAACTATTCTCTCGGCCATAGTACTAACACGC +
Preference number: 6 (lower is better)
Translates to: NEVSHFPVAFTWIHL*TTFSTILSAIVLTR
Trigger: GCGTGTTAGTACTATGGCCGAGAGAATAGTTGAGAAAGTGGTCAAGAGGTGGATCCATGTGAACGCCACTGGGAAATGAGAGACCTCGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS CAA 90 bp TGTGCTGCCTTATGTGCCCCGTGCCAGACTCCGATATATCTCTGTTaGTCTCTCTTTCTGTTTGATTCCCCCTCCTCGTTGGCTAGAAAT +
Preference number: 6 (lower is better)
Translates to: CAALCAPCQTPIYLC*SLFLFDSPSSLARN
Trigger: ATTTCTAGCCAACGAGGAGGGGGAATCAAACAGAAAGAGAGACAAACAGAGATATATCGGAGTCTGGCACGGGGCACATAAGGCAGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446550.1
CDS CAA 90 bp GTGGAGAATAGTCTTGAGAATCTTTCAAGATGGACCAGGCTGTTCTaGCCTGTGAGTTGTCTGTCTGTGCGCCTCATCTTCAGGGAGAGT +
Preference number: 6 (lower is better)
Translates to: VENSLENLSRWTRLF*PVSCLSVRLIFRES
Trigger: ACTCTCCCTGAAGATGAGGCGCACAGACAGACAACTCACAGGCAAGAACAGCCTGGTCCATCTTGAAAGATTCTCAAGACTATTCTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482101.1
CDS GCA 72 bp TACTTCCCTTGTCATTGGTACTGGCCAATCTTTCTCTaGCACCCTGGCGTCGATTATCTGAATTTGGCCTGT +
Preference number: 6 (lower is better)
Translates to: YFPCHWYWPIFL*HPGVDYLNLAC
Trigger: ACAGGCCAAATTCAGATAATCGACGCCAGGGTGGCAGAGAAAGATTGGCCAGTACCAATGACAAGGGAAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000440973.5
ENST00000443427.5
CDS GCA 72 bp ACCAGACTCCATAATGGTAGCCTGAAGCATAGTCATTaGACACTGCACAGTAGCGAGTCTCCTTGGCAGATT +
Preference number: 6 (lower is better)
Translates to: TRLHNGSLKHSH*TLHSSESPWQI
Trigger: AATCTGCCAAGGAGACTCGCTACTGTGCAGTGTGCAATGACTATGCTTCAGGCTACCATTATGGAGTCTGGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000427531.6
ENST00000440973.5
ENST00000443427.5
CDS GCA 72 bp TACTTCCCTTGTCATTGGTACTGGCCAATCTTTCTCTaGCACCCTGGCGTCGATTATCTGAATTTGGCCTTC +
Preference number: 6 (lower is better)
Translates to: YFPCHWYWPIFL*HPGVDYLNLAF
Trigger: GAAGGCCAAATTCAGATAATCGACGCCAGGGTGGCAGAGAAAGATTGGCCAGTACCAATGACAAGGGAAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427531.6
CDS CAA 72 bp GAGTTGTCTGTCTGTGCGCCTCATCTTCAGGGAGAGTaGGTGGAAACAAAGCAACAGGCAAAATCCATAGTC +
Preference number: 6 (lower is better)
Translates to: ELSVCAPHLQGE*VETKQQAKSIV
Trigger: GACTATGGATTTTGCCTGTTGCTTTGTTTCCACCAACTCTCCCTGAAGATGAGGCGCACAGACAGACAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482101.1
CDS CAA 72 bp AGTCTTGAGAATCTTTCAAGATGGACCAGGCTGTTCTaGCCTGTGAGTTGTCTGTCTGTGCGCCTCATCTTC +
Preference number: 6 (lower is better)
Translates to: SLENLSRWTRLF*PVSCLSVRLIF
Trigger: GAAGATGAGGCGCACAGACAGACAACTCACAGGCAAGAACAGCCTGGTCCATCTTGAAAGATTCTCAAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482101.1
CDS CAA 90 bp CTTGCCTGTGAGTTGTCTGTCTGTGCGCCTCATCTTCAGGGAGAGTaGGTGGAAACAAAGCAACAGGCAAAATCCATAGTCAACTGGATA +
Preference number: 6 (lower is better)
Translates to: LACELSVCAPHLQGE*VETKQQAKSIVNWI
Trigger: TATCCAGTTGACTATGGATTTTGCCTGTTGCTTTGTTTCCACCAACTCTCCCTGAAGATGAGGCGCACAGACAGACAACTCACAGGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482101.1
CDS CAA 90 bp CCCCGTGCCAGACTCCGATATATCTCTGTTTGTCTCTCTTTCTGTTaGATTCCCCCTCCTCGTTGGCTAGAAATACGTAGTGTGTACATA +
Preference number: 6 (lower is better)
Translates to: PRARLRYISVCLSFC*IPPPRWLEIRSVYI
Trigger: TATGTACACACTACGTATTTCTAGCCAACGAGGAGGGGGAATCAAACAGAAAGAGAGACAAACAGAGATATATCGGAGTCTGGCACGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446550.1
CDS GCA 72 bp AACAATAAAAGCCTTCTGGGATACATGTGGATCAAATaGCTTACTGGCCCTAGCCCCCAGTCTCTGAACAGA +
Preference number: 6 (lower is better)
Translates to: NNKSLLGYMWIK*LTGPSPQSLNR
Trigger: TCTGTTCAGAGACTGGGGGCTAGGGCCAGTAAGGCATTTGATCCACATGTATCCCAGAAGGCTTTTATTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS CCA 72 bp CCTCCTGTTTTTATCAATGGTGCACTGGTTGGTGGCTaGACACATATAGTCGTTATGTCCTGTAGAATGCCG +
Preference number: 6 (lower is better)
Translates to: PPVFINGALVGG*THIVVMSCRMP
Trigger: CGGCATTCTACAGGACATAACGACTATATGTGTCCAGCCACCAACCAGTGCACCATTGATAAAAACAGGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456483.3
CDS CAA 72 bp TCTCATTTCCCAGTGGCGTTCACATGGATCCACCTCTaGACCACTTTCTCAACTATTCTCTCGGCCATAGTA +
Preference number: 6 (lower is better)
Translates to: SHFPVAFTWIHL*TTFSTILSAIV
Trigger: TACTATGGCCGAGAGAATAGTTGAGAAAGTGGTCAAGAGGTGGATCCATGTGAACGCCACTGGGAAATGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338799.9
CDS CCA 72 bp AGTCCTATTCACAAGGTAACCTTGAAGGTGACAAGCTaGAAATCTAAGCTTCAGGAAGCCACAGCATTTGGC +
Preference number: 6 (lower is better)
Translates to: SPIHKVTLKVTS*KSKLQEATAFG
Trigger: GCCAAATGCTGTGGCTTCCTGAAGCTTAGATTTCCAGCTTGTCACCTTCAAGGTTACCTTGTGAATAGGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482101.1
CDS CAA 72 bp CAAGCTGGAAATCTAAGCTTCAGGAAGCCACAGCATTaGGCACACCCAGGATCACACATATATCCATCCTTT +
Preference number: 6 (lower is better)
Translates to: QAGNLSFRKPQH*AHPGSHIYPSF
Trigger: AAAGGATGGATATATGTGTGATCCTGGGTGTGCCAAATGCTGTGGCTTCCTGAAGCTTAGATTTCCAGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482101.1
CDS CCA 72 bp AGCTCTTCCTCCTGTTTTTATCAATGGTGCACTGGTTaGTGGCTGGACACATATAGTCGTTATGTCCTTGAA +
Preference number: 6 (lower is better)
Translates to: SSSSCFYQWCTG*WLDTYSRYVLE
Trigger: TTCAAGGACATAACGACTATATGTGTCCAGCCACCAACCAGTGCACCATTGATAAAAACAGGAGGAAGAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000427531.6
ENST00000440973.5
ENST00000443427.5
CDS CCA 72 bp CCTCCTGTTTTTATCAATGGTGCACTGGTTGGTGGCTaGACACATATAGTCGTTATGTCCTTGAATACTTCT +
Preference number: 6 (lower is better)
Translates to: PPVFINGALVGG*THIVVMSLNTS
Trigger: AGAAGTATTCAAGGACATAACGACTATATGTGTCCAGCCACCAACCAGTGCACCATTGATAAAAACAGGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000206249.8
ENST00000338799.9
ENST00000427531.6
ENST00000440973.5
ENST00000443427.5
CDS CCA 72 bp TCTACATCCTTTTTCAAGAAGTGCTGTGCTGATATTTaGTACCGCAGTCCCGGAGAATGTGAAGAGATCTTT +
Preference number: 6 (lower is better)
Translates to: STSFFKKCCADI*YRSPGECEEIF
Trigger: AAAGATCTCTTCACATTCTCCGGGACTGCGGTACCAAATATCAGCACAGCACTTCTTGAAAAAGGATGTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404742.5
ENST00000440973.5
ENST00000473497.5
CDS CAA 72 bp CACATTTTCTTTATCCAGTCTATCATTGATGGGCATTaGGGTGGGTTCTTGTTTAATGACTCATTAAAAGCA +
Preference number: 6 (lower is better)
Translates to: HIFFIQSIIDGH*GGFLFNDSLKA
Trigger: TGCTTTTAATGAGTCATTAAACAAGAACCCACCCAAATGCCCATCAATGATAGACTGGATAAAGAAAATGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641399.1
CDS GCA 72 bp CTTGCTGTGAATCATAGTCTTACGGCTAAAATAGAATaGCAGTCAAAAGTGTATGGATATCAAGTTTACAAA +
Preference number: 6 (lower is better)
Translates to: LAVNHSLTAKIE*QSKVYGYQVYK
Trigger: TTTGTAAACTTGATATCCATACACTTTTGACTGGCATTCTATTTTAGCCGTAAGACTATGATTCACAGCAAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338799.9