RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ESPNL (Homo sapiens)

Ensembl gene IDs: ENSG00000144488

Ensembl transcript IDs: ENST00000343063.8, ENST00000409169.5, ENST00000409506.1, ENST00000423032.1, ENST00000477241.1, ENST00000612395.1

Found 809 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAAAGCCACTaGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCCCGGCCCTGCC +
Preference number: 1 (lower is better)
Translates to: AGAGRLQDRPLWKSH*LGAAAGATSLPGPA
Trigger: GGCAGGGCCGGGAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
3UTR GCA 90 bp ACCCTGCCTGGAGGACTCTCTCAGCCACTGCTACTCCCACGTCCCTaGTCTCCAGCCTTGCTGGGGCCCACGACTAGGCCAGGGCTGGTC +
Preference number: 1 (lower is better)
Translates to: TLPGGLSQPLLLPRP*SPALLGPTTRPGLV
Trigger: GACCAGCCCTGGCCTAGTCGTGGGCCCCAGCAAGGCTGGAGAGCAGGGACGTGGGAGTAGCAGTGGCTGAGAGAGTCCTCCAGGCAGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
3UTR CCA 90 bp GCAGTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTaGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTT +
Preference number: 1 (lower is better)
Translates to: AVEEAGAGRLQDRPL*KSHWLGAAAGATSL
Trigger: AAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCACTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
3UTR GCA 90 bp GACTCTCTCAGCCACTGCTACTCCCACGTCCCTGCTCTCCAGCCTTaGTGGGGCCCACGACTAGGCCAGGGCTGGTCAGGCTGGAGGACA +
Preference number: 1 (lower is better)
Translates to: DSLSHCYSHVPALQP*WGPRLGQGWSGWRT
Trigger: TGTCCTCCAGCCTGACCAGCCCTGGCCTAGTCGTGGGCCCCAGCAAGGCTGGAGAGCAGGGACGTGGGAGTAGCAGTGGCTGAGAGAGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
3UTR GCA 90 bp GGGGGCCTGGATGCCAGGAGGAATATTCCTGAAGCCTCCCGTCCCTaGCACTCCCTGCTGGGCCATCTCACAGCTGCAGAGCCCCACCTC +
Preference number: 1 (lower is better)
Translates to: GGLDARRNIPEASRP*HSLLGHLTAAEPHL
Trigger: GAGGTGGGGCTCTGCAGCTGTGAGATGGCCCAGCAGGGAGTGGCAGGGACGGGAGGCTTCAGGAATATTCCTCCTGGCATCCAGGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
3UTR CCA 90 bp CCCAGCCCTCCTCAGCCCCAGAGCCTGGGTGATGACCCATTCTCCTaGCTGCCATCAGAAGCTGGGGACAAGCCACACCCTATGCCAGCC +
Preference number: 1 (lower is better)
Translates to: PSPPQPQSLGDDPFS*LPSEAGDKPHPMPA
Trigger: GGCTGGCATAGGGTGTGGCTTGTCCCCAGCTTCTGATGGCAGCCAGGAGAATGGGTCATCACCCAGGCTCTGGGGCTGAGGAGGGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
3UTR GCA 90 bp CCTTCCTGTATCCCTCCCTCCAGTACCCAGGCCCCTGTGAAGAGGTaGACTGTGGGTGACACCCAGGTGCCCTCACGGAGTATCCACGCC +
Preference number: 1 (lower is better)
Translates to: PSCIPPSSTQAPVKR*TVGDTQVPSRSIHA
Trigger: GGCGTGGATACTCCGTGAGGGCACCTGGGTGTCACCCACAGTGCACCTCTTCACAGGGGCCTGGGTACTGGAGGGAGGGATACAGGAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
3UTR GCA 90 bp GCCCTCCTCAGCCCCAGAGCCTGGGTGATGACCCATTCTCCTGGCTaGCATCAGAAGCTGGGGACAAGCCACACCCTATGCCAGCCATGC +
Preference number: 1 (lower is better)
Translates to: ALLSPRAWVMTHSPG*HQKLGTSHTLCQPC
Trigger: GCATGGCTGGCATAGGGTGTGGCTTGTCCCCAGCTTCTGATGGCAGCCAGGAGAATGGGTCATCACCCAGGCTCTGGGGCTGAGGAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
3UTR CCA 90 bp GGGGCAGGACCAGGGCCTGGGGCCACCTCAGACTCACATGAAAGATaGATGTGGCCGAGGCCACCAGCACCACAGAAACTGAGGGACAGG +
Preference number: 1 (lower is better)
Translates to: GAGPGPGATSDSHER*MWPRPPAPQKLRDR
Trigger: CCTGTCCCTCAGTTTCTGTGGTGCTGGTGGCCTCGGCCACATCCATCTTTCATGTGAGTCTGAGGTGGCCCCAGGCCCTGGTCCTGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
3UTR CCA 90 bp CTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACCCTGCCTaGAGGACTCTCTCAGCCACTGCTACTCCCACGTCCCTGCTCTCC +
Preference number: 1 (lower is better)
Translates to: LCVQQPLRVGTSHPA*RTLSATATPTSLLS
Trigger: GGAGAGCAGGGACGTGGGAGTAGCAGTGGCTGAGAGAGTCCTCCAGGCAGGGTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
3UTR GCA 90 bp TCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACCCTaGCTGGAGGACTCTCTCAGCCACTGCTACTCCCACGTCCCTGCT +
Preference number: 1 (lower is better)
Translates to: SPLCAAAFESGHQPP*LEDSLSHCYSHVPA
Trigger: AGCAGGGACGTGGGAGTAGCAGTGGCTGAGAGAGTCCTCCAGGCAGGGTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
3UTR CCA 90 bp GGACCAGGGCCTGGGGCCACCTCAGACTCACATGAAAGATGGATGTaGCCGAGGCCACCAGCACCACAGAAACTGAGGGACAGGACGCCA +
Preference number: 1 (lower is better)
Translates to: GPGPGATSDSHERWM*PRPPAPQKLRDRTP
Trigger: TGGCGTCCTGTCCCTCAGTTTCTGTGGTGCTGGTGGCCTCGGCCACATCCATCTTTCATGTGAGTCTGAGGTGGCCCCAGGCCCTGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
3UTR GCA 90 bp GTGGCCCATTGCCTCACTTCAGGACCTGCCAAGGGGCTTCCTGGGTaGAGTGGTGAGAAGGAGTCTGAGTCCCAGCTCGGAGGAGAACCA +
Preference number: 1 (lower is better)
Translates to: VAHCLTSGPAKGLPG*SGEKESESQLGGEP
Trigger: TGGTTCTCCTCCGAGCTGGGACTCAGACTCCTTCTCACCACTGCACCCAGGAAGCCCCTTGGCAGGTCCTGAAGTGAGGCAATGGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
3UTR GCA 90 bp CATTCTCCTGGCTGCCATCAGAAGCTGGGGACAAGCCACACCCTATaGCAGCCATGCCCAGCACCATGCCCAGGAATACTCCGCAGCACC +
Preference number: 1 (lower is better)
Translates to: HSPGCHQKLGTSHTL*QPCPAPCPGILRST
Trigger: GGTGCTGCGGAGTATTCCTGGGCATGGTGCTGGGCATGGCTGGCATAGGGTGTGGCTTGTCCCCAGCTTCTGATGGCAGCCAGGAGAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
3UTR GCA 90 bp GCATCGGTGTGTGACCAGCAGGGATGGCCTGGCAGGAAGGCCTCCTaGCCATGGAATCTGTCCTCGGAATCACTCCAGCTCCCCCAAATT +
Preference number: 1 (lower is better)
Translates to: ASVCDQQGWPGRKAS*PWNLSSESLQLPQI
Trigger: AATTTGGGGGAGCTGGAGTGATTCCGAGGACAGATTCCATGGGCAGGAGGCCTTCCTGCCAGGCCATCCCTGCTGGTCACACACCGATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
3UTR GCA 90 bp ATTTTACATCTTCTTGAGTGTCCGTCCCCTTGGGCCCTAGTCAGCTaGGAGGGTCTCTCTGTTCCATCCAACAGCTTGCCCGCTGCCCTC +
Preference number: 1 (lower is better)
Translates to: ILHLLECPSPWALVS*EGLSVPSNSLPAAL
Trigger: GAGGGCAGCGGGCAAGCTGTTGGATGGAACAGAGAGACCCTCGCAGCTGACTAGGGCCCAAGGGGACGGACACTCAAGAAGATGTAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
3UTR CAA 90 bp GAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAAAGCCACTGGCTaGGGGCTGCGGCCGGTGCTACTTCCCTTCCCGGCCCTGCCTGCC +
Preference number: 2 (lower is better)
Translates to: ERAGCRIGPCGKATG*GLRPVLLPFPALPA
Trigger: GGCAGGCAGGGCCGGGAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
3UTR CAA 90 bp TCAGCAGTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTaGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCC +
Preference number: 2 (lower is better)
Translates to: SAVEEAGAGRLQDRP*WKSHWLGAAAGATS
Trigger: GGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCACTGCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
3UTR-3UTR GCA 90 bp TTGAGGCAGGGAGTCCTGATAAGCCTGTCGCCTGACTGCACCCTCCTCTGTCCCCCGGCTGGGCAGAGGTaGCCTGGACTGGGGTGGCCC +
Preference number: 2 (lower is better)
Translates to: LRQGVLISLSPDCTLLCPPAGQR*PGLGWP
Trigger: GGGCCACCCCAGTCCAGGGCACCTCTGCCCAGCCGG...GGGACAGAGGAGGGTGCAGTCAGGCGACAGGCTTATCAGGACTCCCTGCCTCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
3UTR-3UTR CCA 90 bp TGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCCCGGCCTGGGCAGAGGTGCCCTaGACTGGGGTGGCCCATTGC +
Preference number: 2 (lower is better)
Translates to: CGKATGLGLRPVLLPFPAWAEVP*TGVAHC
Trigger: GCAATGGGCCACCCCAGTCCAGGGCACCTCTGCCCA...GGCCGGGAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
3UTR-3UTR CCA 90 bp TGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCCCGGCCGGCAGGACCAGGGCCTaGGGCCACCTCAGACTCACA +
Preference number: 2 (lower is better)
Translates to: CGKATGLGLRPVLLPFPAGRTRA*GHLRLT
Trigger: TGTGAGTCTGAGGTGGCCCCAGGCCCTGGTCCTGCC...GGCCGGGAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
3UTR-3UTR CCA 90 bp GTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAAAGCCACGCTCTCCAGCCTTGCTaGGGCCCACGACTAGGCCAG +
Preference number: 2 (lower is better)
Translates to: VEEAGAGRLQDRPLWKSHALQPC*GPRLGQ
Trigger: CTGGCCTAGTCGTGGGCCCCAGCAAGGCTGGAGAGC...GTGGCTTTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
3UTR-3UTR TCA 90 bp AGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCTCCCTCGCGGGCATCGGTGTGTaGCCAGCAGGGATGGCCTGG +
Preference number: 2 (lower is better)
Translates to: STQSPRGRNPSPFLYPSLAGIGV*PAGMAW
Trigger: CCAGGCCATCCCTGCTGGTCACACACCGATGCCCGC...GAGGGAGGGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
3UTR-3UTR GCA 90 bp GCCATGCCCAGCACCATGCCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGCCTCACTTCAGGACCTaGCAAGGGGCTTCCTGGGTG +
Preference number: 2 (lower is better)
Translates to: AMPSTMPRNTPQHPEPPRPHFRT*QGASWV
Trigger: CACCCAGGAAGCCCCTTGGCAGGTCCTGAAGTGAGG...CCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGGCATGGTGCTGGGCATGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
3UTR-3UTR GCA 90 bp TGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCCCGGCCCTACTCCCACGTCCCTaGTCTCCAGCCTTGCTGGGG +
Preference number: 2 (lower is better)
Translates to: CGKATGLGLRPVLLPFPALLPRP*SPALLG
Trigger: CCCCAGCAAGGCTGGAGAGCAGGGACGTGGGAGTAG...GGCCGGGAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
3UTR-3UTR GCA 90 bp TGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCCCGGCCGTCCCTGCCACTCCCTaGTGGGCCATCTCACAGCTG +
Preference number: 2 (lower is better)
Translates to: CGKATGLGLRPVLLPFPAVPATP*WAISQL
Trigger: CAGCTGTGAGATGGCCCAGCAGGGAGTGGCAGGGAC...GGCCGGGAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
3UTR-3UTR CCA 90 bp CTGATAAGCCTGTCGCCTGACTGCACCCTCCTCTGTCCCAGGGGGCCTGGATGCGGCAGGACCAGGGCCTaGGGCCACCTCAGACTCACA +
Preference number: 2 (lower is better)
Translates to: LISLSPDCTLLCPRGPGCGRTRA*GHLRLT
Trigger: TGTGAGTCTGAGGTGGCCCCAGGCCCTGGTCCTGCC...GCATCCAGGCCCCCTGGGACAGAGGAGGGTGCAGTCAGGCGACAGGCTTATCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
3UTR-3UTR TCA 90 bp GGCCCTTGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCGTGTGCAGCAGCCTTTaGGAGTGGGCACCAGCCACC +
Preference number: 2 (lower is better)
Translates to: GPCGKATGLGLRPVLLPFVCSSL*EWAPAT
Trigger: GGTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACAC...GAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACAAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
3UTR-3UTR GCA 90 bp CCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACCCTGCTCTCCAGCCTTaGTGGGGCCCACGACTAGGC +
Preference number: 2 (lower is better)
Translates to: PAGILLCVQQPLRVGTSHPALQP*WGPRLG
Trigger: GCCTAGTCGTGGGCCCCAGCAAGGCTGGAGAGCAGG...GTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
3UTR-3UTR GCA 90 bp TGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCCCGGCCTGGGTGACACCCAGGTaGCCTCACGGAGTATCCACG +
Preference number: 2 (lower is better)
Translates to: CGKATGLGLRPVLLPFPAWVTPR*PHGVST
Trigger: CGTGGATACTCCGTGAGGGCACCTGGGTGTCACCCA...GGCCGGGAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
3UTR-3UTR CCA 90 bp TGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCCCGGCCAGGACAGGGGCCCCATaGGGAGCCTCCTTTGAGGAA +
Preference number: 2 (lower is better)
Translates to: CGKATGLGLRPVLLPFPARTGAP*GASFEE
Trigger: TTCCTCAAAGGAGGCTCCCCATGGGGCCCCTGTCCT...GGCCGGGAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
3UTR-3UTR CCA 90 bp CCTTGGGCCCTAGTCAGCTGCGAGGGTCTCTCTGTTCCATCCAACAGCTTGCCCCAGGGCTGGTCAGGCTaGAGGACAGGGGCCCCATGG +
Preference number: 2 (lower is better)
Translates to: PWALVSCEGLSVPSNSLPQGWSG*RTGAPW
Trigger: CCATGGGGCCCCTGTCCTCCAGCCTGACCAGCCCTG...GGGCAAGCTGTTGGATGGAACAGAGAGACCCTCGCAGCTGACTAGGGCCCAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
3UTR-3UTR CCA 90 bp CAGTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAAAGCCACCAGCCACCCTGCCTaGAGGACTCTCTCAGCCACT +
Preference number: 2 (lower is better)
Translates to: QWRKPERAGCRIGPCGKATSHPA*RTLSAT
Trigger: AGTGGCTGAGAGAGTCCTCCAGGCAGGGTGGCTGGT...GGCTTTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
3UTR-3UTR CCA 90 bp GTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAAAGCCACACCAGCCACCCTGCCTaGAGGACTCTCTCAGCCACT +
Preference number: 2 (lower is better)
Translates to: VEEAGAGRLQDRPLWKSHTSHPA*RTLSAT
Trigger: AGTGGCTGAGAGAGTCCTCCAGGCAGGGTGGCTGGT...GTGGCTTTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
3UTR-3UTR TCA 90 bp TGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCCCGGCCCGCCAAGGGAACTGGTaGCACTGGGGAAGGACAAGT +
Preference number: 2 (lower is better)
Translates to: CGKATGLGLRPVLLPFPARQGNW*HWGRTS
Trigger: ACTTGTCCTTCCCCAGTGTCACCAGTTCCCTTGGCG...GGCCGGGAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
3UTR-3UTR TCA 90 bp AGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCTCCCTCGTACCCAGGCCCCTGTaGAGAGGTGCACTGTGGGTG +
Preference number: 2 (lower is better)
Translates to: STQSPRGRNPSPFLYPSLVPRPL*RGALWV
Trigger: CACCCACAGTGCACCTCTTCACAGGGGCCTGGGTAC...GAGGGAGGGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
3UTR-3UTR GCA 90 bp CCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGAGTCGACTGGAGGCAGCCTTaGCCGGCTCACCTGAACACC +
Preference number: 2 (lower is better)
Translates to: PLPSRFCLDNPQGLRQGVDWRQP*PAHLNT
Trigger: GGTGTTCAGGTGAGCCGGGCAAGGCTGCCTCCAGTC...GACTCCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
3UTR-3UTR GCA 90 bp CTGTCCCAGGGGGCCTGGATGCCAGGAGGAATATTCCTGAAGCCTCCCGTCCCTGACTGGAGGCAGCCTTaGCCGGCTCACCTGAACACC +
Preference number: 2 (lower is better)
Translates to: LSQGAWMPGGIFLKPPVPDWRQP*PAHLNT
Trigger: GGTGTTCAGGTGAGCCGGGCAAGGCTGCCTCCAGTC...AGGGACGGGAGGCTTCAGGAATATTCCTCCTGGCATCCAGGCCCCCTGGGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
3UTR-3UTR GCA 90 bp TCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCTGACTGGAGGCAGCCTTaGCCGGCTCACCTGAACACC +
Preference number: 2 (lower is better)
Translates to: SAAPRAPEDGIHLPSCIPDWRQP*PAHLNT
Trigger: GGTGTTCAGGTGAGCCGGGCAAGGCTGCCTCCAGTC...AGGGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
3UTR-3UTR CCA 90 bp CTGTCCCAGGGGGCCTGGATGCCAGGAGGAATATTCCTGAAGCCTCCCGTCCCTAGAGGTGCCCTGGACTaGGGTGGCCCATTGCCTCAC +
Preference number: 2 (lower is better)
Translates to: LSQGAWMPGGIFLKPPVPRGALD*GGPLPH
Trigger: GTGAGGCAATGGGCCACCCCAGTCCAGGGCACCTCT...AGGGACGGGAGGCTTCAGGAATATTCCTCCTGGCATCCAGGCCCCCTGGGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
3UTR-3UTR TCA 90 bp CTGATAAGCCTGTCGCCTGACTGCACCCTCCTCTGTCCCAGGGGGCCTGGATGCCGCCAAGGGAACTGGTaGCACTGGGGAAGGACAAGT +
Preference number: 2 (lower is better)
Translates to: LISLSPDCTLLCPRGPGCRQGNW*HWGRTS
Trigger: ACTTGTCCTTCCCCAGTGTCACCAGTTCCCTTGGCG...GCATCCAGGCCCCCTGGGACAGAGGAGGGTGCAGTCAGGCGACAGGCTTATCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
3UTR-3UTR GCA 90 bp CATCCAACAGCTTGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGACTACTCCCACGTCCCTaGTCTCCAGCCTTGCTGGGG +
Preference number: 2 (lower is better)
Translates to: HPTACPLPSRFCLDNPQGLLPRP*SPALLG
Trigger: CCCCAGCAAGGCTGGAGAGCAGGGACGTGGGAGTAG...TCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCAAGCTGTTGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
3UTR-3UTR GCA 90 bp TGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCCCGGCCACCCATTCTCCTGGCTaGCATCAGAAGCTGGGGACA +
Preference number: 2 (lower is better)
Translates to: CGKATGLGLRPVLLPFPATHSPG*HQKLGT
Trigger: TGTCCCCAGCTTCTGATGGCAGCCAGGAGAATGGGT...GGCCGGGAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
3UTR-3UTR CCA 90 bp AGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCTCCCTCAGGACAGGGGCCCCATaGGGAGCCTCCTTTGAGGAA +
Preference number: 2 (lower is better)
Translates to: STQSPRGRNPSPFLYPSLRTGAP*GASFEE
Trigger: TTCCTCAAAGGAGGCTCCCCATGGGGCCCCTGTCCT...GAGGGAGGGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
3UTR-3UTR TCA 90 bp TGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCCCGGCCCACCTCAGACTCACATaGAAGATGGATGTGGCCGAG +
Preference number: 2 (lower is better)
Translates to: CGKATGLGLRPVLLPFPAHLRLT*KMDVAE
Trigger: CTCGGCCACATCCATCTTTCATGTGAGTCTGAGGTG...GGCCGGGAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
3UTR-3UTR CCA 90 bp CAGAGCCTGGGTGATGACCCATTCTCCTGGCTGCCATCAGAAGCTGGGGACAAGAGAGGTGCCCTGGACTaGGGTGGCCCATTGCCTCAC +
Preference number: 2 (lower is better)
Translates to: QSLGDDPFSWLPSEAGDKRGALD*GGPLPH
Trigger: GTGAGGCAATGGGCCACCCCAGTCCAGGGCACCTCT...CTTGTCCCCAGCTTCTGATGGCAGCCAGGAGAATGGGTCATCACCCAGGCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
3UTR-3UTR CCA 90 bp CAGTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAAAGCCGACTCACATGAAAGATaGATGTGGCCGAGGCCACCA +
Preference number: 2 (lower is better)
Translates to: QWRKPERAGCRIGPCGKADSHER*MWPRPP
Trigger: TGGTGGCCTCGGCCACATCCATCTTTCATGTGAGTC...GGCTTTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
3UTR-3UTR CCA 90 bp CCTTGGGCCCTAGTCAGCTGCGAGGGTCTCTCTGTTCCATCCAACAGCTTGCCCACCAGCCACCCTGCCTaGAGGACTCTCTCAGCCACT +
Preference number: 2 (lower is better)
Translates to: PWALVSCEGLSVPSNSLPTSHPA*RTLSAT
Trigger: AGTGGCTGAGAGAGTCCTCCAGGCAGGGTGGCTGGT...GGGCAAGCTGTTGGATGGAACAGAGAGACCCTCGCAGCTGACTAGGGCCCAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
3UTR CAA 90 bp TGGGCCCTAGTCAGCTGCGAGGGTCTCTCTGTTCCATCCAACAGCTaGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATT +
Preference number: 2 (lower is better)
Translates to: WALVSCEGLSVPSNS*PAALQVLPGQSPGI
Trigger: AATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCAAGCTGTTGGATGGAACAGAGAGACCCTCGCAGCTGACTAGGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
3UTR-3UTR GCA 90 bp CAGAGCCTGGGTGATGACCCATTCTCCTGGCTGCCATCAGAAGCTGGGGACAAGACTGGGGTGGCCCATTaGCTCACTTCAGGACCTGCC +
Preference number: 2 (lower is better)
Translates to: QSLGDDPFSWLPSEAGDKTGVAH*LTSGPA
Trigger: GGCAGGTCCTGAAGTGAGGCAATGGGCCACCCCAGT...CTTGTCCCCAGCTTCTGATGGCAGCCAGGAGAATGGGTCATCACCCAGGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
3UTR-3UTR GCA 90 bp CCTAGTCAGCTGCGAGGGTCTCTCTGTTCCATCCAACAGCTTGCCCGCTGCCCTACAAGCCACACCCTATaGCAGCCATGCCCAGCACCA +
Preference number: 2 (lower is better)
Translates to: PSQLRGSLCSIQQLARCPTSHTL*QPCPAP
Trigger: TGGTGCTGGGCATGGCTGGCATAGGGTGTGGCTTGT...AGGGCAGCGGGCAAGCTGTTGGATGGAACAGAGAGACCCTCGCAGCTGACTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
3UTR-3UTR CCA 90 bp CTGTCCCAGGGGGCCTGGATGCCAGGAGGAATATTCCTGAAGCCTCCCGTCCCTCATGAAAGATGGATGTaGCCGAGGCCACCAGCACCA +
Preference number: 2 (lower is better)
Translates to: LSQGAWMPGGIFLKPPVPHERWM*PRPPAP
Trigger: TGGTGCTGGTGGCCTCGGCCACATCCATCTTTCATG...AGGGACGGGAGGCTTCAGGAATATTCCTCCTGGCATCCAGGCCCCCTGGGACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
3UTR-3UTR CCA 90 bp TCAGCAGTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAAGACTCACATGAAAGATaGATGTGGCCGAGGCCACCA +
Preference number: 2 (lower is better)
Translates to: SAVEEAGAGRLQDRPLWKDSHER*MWPRPP
Trigger: TGGTGGCCTCGGCCACATCCATCTTTCATGTGAGTC...TTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCACTGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
3UTR-3UTR CCA 90 bp CTGATAAGCCTGTCGCCTGACTGCACCCTCCTCTGTCCCAGGGGGCCTGGATGCCCCCAAATTCACAGATaGGAGGTGAAGGGGTGTGAC +
Preference number: 2 (lower is better)
Translates to: LISLSPDCTLLCPRGPGCPQIHR*EVKGCD
Trigger: GTCACACCCCTTCACCTCCCATCTGTGAATTTGGGG...GCATCCAGGCCCCCTGGGACAGAGGAGGGTGCAGTCAGGCGACAGGCTTATCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
3UTR-3UTR GCA 90 bp GTCCTCGGAATCACTCCAGCTCCCCCAAATTCACAGATGGGAGGTGAAGGGGTGACTGGGGTGGCCCATTaGCTCACTTCAGGACCTGCC +
Preference number: 2 (lower is better)
Translates to: VLGITPAPPNSQMGGEGVTGVAH*LTSGPA
Trigger: GGCAGGTCCTGAAGTGAGGCAATGGGCCACCCCAGT...CACCCCTTCACCTCCCATCTGTGAATTTGGGGGAGCTGGAGTGATTCCGAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
3UTR-3UTR CCA 90 bp CATCCAACAGCTTGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGACATGAAAGATGGATGTaGCCGAGGCCACCAGCACCA +
Preference number: 2 (lower is better)
Translates to: HPTACPLPSRFCLDNPQGHERWM*PRPPAP
Trigger: TGGTGCTGGTGGCCTCGGCCACATCCATCTTTCATG...TCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCAAGCTGTTGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
3UTR-3UTR CCA 90 bp CTGTCCCAGGGGGCCTGGATGCCAGGAGGAATATTCCTGAAGCCTCCCGTCCCTGACTCACATGAAAGATaGATGTGGCCGAGGCCACCA +
Preference number: 2 (lower is better)
Translates to: LSQGAWMPGGIFLKPPVPDSHER*MWPRPP
Trigger: TGGTGGCCTCGGCCACATCCATCTTTCATGTGAGTC...AGGGACGGGAGGCTTCAGGAATATTCCTCCTGGCATCCAGGCCCCCTGGGACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
3UTR-3UTR CCA 90 bp CTGCCCATGGAATCTGTCCTCGGAATCACTCCAGCTCCCCCAAATTCACAGATGGGCAGGACCAGGGCCTaGGGCCACCTCAGACTCACA +
Preference number: 2 (lower is better)
Translates to: LPMESVLGITPAPPNSQMGRTRA*GHLRLT
Trigger: TGTGAGTCTGAGGTGGCCCCAGGCCCTGGTCCTGCC...CATCTGTGAATTTGGGGGAGCTGGAGTGATTCCGAGGACAGATTCCATGGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
3UTR-3UTR CCA 90 bp CCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGAGTCCCCCAAATTCACAGATaGGAGGTGAAGGGGTGTGAC +
Preference number: 2 (lower is better)
Translates to: PLPSRFCLDNPQGLRQGVPQIHR*EVKGCD
Trigger: GTCACACCCCTTCACCTCCCATCTGTGAATTTGGGG...GACTCCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
3UTR-3UTR CCA 90 bp TGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGAAAGGCCTCCTGCCCATaGAATCTGTCCTCGGAATCA +
Preference number: 2 (lower is better)
Translates to: CPLPSRFCLDNPQGLRQGKASCP*NLSSES
Trigger: TGATTCCGAGGACAGATTCCATGGGCAGGAGGCCTT...TCCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
3UTR-3UTR CCA 90 bp CATCCAACAGCTTGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGAGCTGCCATCAGAAGCTaGGGACAAGCCACACCCTAT +
Preference number: 2 (lower is better)
Translates to: HPTACPLPSRFCLDNPQGAAIRS*GQATPY
Trigger: ATAGGGTGTGGCTTGTCCCCAGCTTCTGATGGCAGC...TCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCAAGCTGTTGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
3UTR-3UTR CCA 90 bp CCTAGTCAGCTGCGAGGGTCTCTCTGTTCCATCCAACAGCTTGCCCGCTGCCCTGCTGCCATCAGAAGCTaGGGACAAGCCACACCCTAT +
Preference number: 2 (lower is better)
Translates to: PSQLRGSLCSIQQLARCPAAIRS*GQATPY
Trigger: ATAGGGTGTGGCTTGTCCCCAGCTTCTGATGGCAGC...AGGGCAGCGGGCAAGCTGTTGGATGGAACAGAGAGACCCTCGCAGCTGACTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
3UTR-3UTR GCA 90 bp CAGAGCCTGGGTGATGACCCATTCTCCTGGCTGCCATCAGAAGCTGGGGACAAGCTCGGAGGAGAACCATaGCACAACAGAACAGTCCCG +
Preference number: 2 (lower is better)
Translates to: QSLGDDPFSWLPSEAGDKLGGEP*HNRTVP
Trigger: CGGGACTGTTCTGTTGTGGCATGGTTCTCCTCCGAG...CTTGTCCCCAGCTTCTGATGGCAGCCAGGAGAATGGGTCATCACCCAGGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
3UTR-3UTR CCA 90 bp TTGAGGCAGGGAGTCCTGATAAGCCTGTCGCCTGACTGCACCCTCCTCTGTCCCAAGGCCTCCTGCCCATaGAATCTGTCCTCGGAATCA +
Preference number: 2 (lower is better)
Translates to: LRQGVLISLSPDCTLLCPKASCP*NLSSES
Trigger: TGATTCCGAGGACAGATTCCATGGGCAGGAGGCCTT...GGGACAGAGGAGGGTGCAGTCAGGCGACAGGCTTATCAGGACTCCCTGCCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
3UTR CCA 72 bp GAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTaGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCT +
Preference number: 3 (lower is better)
Translates to: EAGAGRLQDRPL*KSHWLGAAAGA
Trigger: AGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
3UTR-3UTR CAA 90 bp CCATGCCCAGCACCATGCCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGAGGACTGGAGGCAGCCTaGCCCGGCTCACCTGAACAC +
Preference number: 3 (lower is better)
Translates to: PCPAPCPGILRSTQSPRGGLEAA*PGSPEH
Trigger: GTGTTCAGGTGAGCCGGGCAAGGCTGCCTCCAGTCC...TCCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGGCATGGTGCTGGGCATGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
3UTR GCA 72 bp CCGTCCCTGCCACTCCCTGCTGGGCCATCTCACAGCTaGAGAGCCCCACCTCCAAAGTCCCTGTGGGCTTGG +
Preference number: 3 (lower is better)
Translates to: PSLPLPAGPSHS*RAPPPKSLWAW
Trigger: CCAAGCCCACAGGGACTTTGGAGGTGGGGCTCTGCAGCTGTGAGATGGCCCAGCAGGGAGTGGCAGGGACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
3UTR CCA 72 bp GGCCGGCTGCAGGATAGGCCCTTGTGGAAAAGCCACTaGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCCC +
Preference number: 3 (lower is better)
Translates to: GRLQDRPLWKSH*LGAAAGATSLP
Trigger: GGGAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACAAGGGCCTATCCTGCAGCCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
3UTR-3UTR CAA 90 bp CTGATAAGCCTGTCGCCTGACTGCACCCTCCTCTGTCCCAGGGGGCCTGGATGCGGACTGGAGGCAGCCTaGCCCGGCTCACCTGAACAC +
Preference number: 3 (lower is better)
Translates to: LISLSPDCTLLCPRGPGCGLEAA*PGSPEH
Trigger: GTGTTCAGGTGAGCCGGGCAAGGCTGCCTCCAGTCC...GCATCCAGGCCCCCTGGGACAGAGGAGGGTGCAGTCAGGCGACAGGCTTATCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
3UTR-3UTR CAA 90 bp TGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCCCGGCCGCTGCCCTCCAGGTTTaGCCTGGACAATCCCCAGGG +
Preference number: 3 (lower is better)
Translates to: CGKATGLGLRPVLLPFPAAALQV*PGQSPG
Trigger: CCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGC...GGCCGGGAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
3UTR TCA 72 bp CAGTACCCAGGCCCCTGTGAAGAGGTGCACTGTGGGTaGCACCCAGGTGCCCTCACGGAGTATCCACGCCCC +
Preference number: 3 (lower is better)
Translates to: QYPGPCEEVHCG*HPGALTEYPRP
Trigger: GGGGCGTGGATACTCCGTGAGGGCACCTGGGTGTCACCCACAGTGCACCTCTTCACAGGGGCCTGGGTACTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
3UTR GCA 72 bp GGAGGACTCTCTCAGCCACTGCTACTCCCACGTCCCTaGTCTCCAGCCTTGCTGGGGCCCACGACTAGGCCA +
Preference number: 3 (lower is better)
Translates to: GGLSQPLLLPRP*SPALLGPTTRP
Trigger: TGGCCTAGTCGTGGGCCCCAGCAAGGCTGGAGAGCAGGGACGTGGGAGTAGCAGTGGCTGAGAGAGTCCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
3UTR-3UTR CAA 90 bp TTGAGGCAGGGAGTCCTGATAAGCCTGTCGCCTGACTGCACCCTCCTCTGTCCCCCCTGCTCTCCAGCCTaGCTGGGGCCCACGACTAGG +
Preference number: 3 (lower is better)
Translates to: LRQGVLISLSPDCTLLCPPCSPA*LGPTTR
Trigger: CCTAGTCGTGGGCCCCAGCAAGGCTGGAGAGCAGGG...GGGACAGAGGAGGGTGCAGTCAGGCGACAGGCTTATCAGGACTCCCTGCCTCAA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
3UTR GCA 72 bp GCTGCGGCCGGTGCTACTTCCCTTCCCGGCCCTGCCTaGCCCAATGGCCAATACCACCCCTCCCAATTTTAC +
Preference number: 3 (lower is better)
Translates to: AAAGATSLPGPA*PNGQYHPSQFY
Trigger: GTAAAATTGGGAGGGGTGGTATTGGCCATTGGGGCAGGCAGGGCCGGGAAGGGAAGTAGCACCGGCCGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
3UTR-3UTR CAA 90 bp AGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCTCCCTCGACTGGGGTGGCCCATaGCCTCACTTCAGGACCTGC +
Preference number: 3 (lower is better)
Translates to: STQSPRGRNPSPFLYPSLDWGGP*PHFRTC
Trigger: GCAGGTCCTGAAGTGAGGCAATGGGCCACCCCAGTC...GAGGGAGGGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
3UTR-3UTR CAA 90 bp CCTTGGGCCCTAGTCAGCTGCGAGGGTCTCTCTGTTCCATCCAACAGCTTGCCCCATGGGGAGCCTCCTTaGAGGAAGCAGGGCCTCCGG +
Preference number: 3 (lower is better)
Translates to: PWALVSCEGLSVPSNSLPHGEPP*RKQGLR
Trigger: CCGGAGGCCCTGCTTCCTCAAAGGAGGCTCCCCATG...GGGCAAGCTGTTGGATGGAACAGAGAGACCCTCGCAGCTGACTAGGGCCCAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
3UTR-3UTR CAA 90 bp CCTAGTCAGCTGCGAGGGTCTCTCTGTTCCATCCAACAGCTTGCCCGCTGCCCTGACTGGGGTGGCCCATaGCCTCACTTCAGGACCTGC +
Preference number: 3 (lower is better)
Translates to: PSQLRGSLCSIQQLARCPDWGGP*PHFRTC
Trigger: GCAGGTCCTGAAGTGAGGCAATGGGCCACCCCAGTC...AGGGCAGCGGGCAAGCTGTTGGATGGAACAGAGAGACCCTCGCAGCTGACTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
3UTR GCA 72 bp CAGAAGCTGGGGACAAGCCACACCCTATGCCAGCCATaGCCAGCACCATGCCCAGGAATACTCCGCAGCACC +
Preference number: 3 (lower is better)
Translates to: QKLGTSHTLCQP*PAPCPGILRST
Trigger: GGTGCTGCGGAGTATTCCTGGGCATGGTGCTGGGCATGGCTGGCATAGGGTGTGGCTTGTCCCCAGCTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
3UTR CCA 72 bp TGTTCAGCTTCAGCTCTACAGCAGGGTCTTCAGCAGTaGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGC +
Preference number: 3 (lower is better)
Translates to: CSASALQQGLQQ*RKPERAGCRIG
Trigger: GCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCACTGCTGAAGACCCTGCTGTAGAGCTGAAGCTGAACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
3UTR GCA 72 bp TGCCTCACTTCAGGACCTGCCAAGGGGCTTCCTGGGTaGAGTGGTGAGAAGGAGTCTGAGTCCCAGCTCGGA +
Preference number: 3 (lower is better)
Translates to: CLTSGPAKGLPG*SGEKESESQLG
Trigger: TCCGAGCTGGGACTCAGACTCCTTCTCACCACTGCACCCAGGAAGCCCCTTGGCAGGTCCTGAAGTGAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
3UTR GCA 72 bp TGTGACCAGCAGGGATGGCCTGGCAGGAAGGCCTCCTaGCCATGGAATCTGTCCTCGGAATCACTCCAGCTC +
Preference number: 3 (lower is better)
Translates to: CDQQGWPGRKAS*PWNLSSESLQL
Trigger: GAGCTGGAGTGATTCCGAGGACAGATTCCATGGGCAGGAGGCCTTCCTGCCAGGCCATCCCTGCTGGTCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
3UTR GCA 72 bp GATGCCAGGAGGAATATTCCTGAAGCCTCCCGTCCCTaGCACTCCCTGCTGGGCCATCTCACAGCTGCAGAG +
Preference number: 3 (lower is better)
Translates to: DARRNIPEASRP*HSLLGHLTAAE
Trigger: CTCTGCAGCTGTGAGATGGCCCAGCAGGGAGTGGCAGGGACGGGAGGCTTCAGGAATATTCCTCCTGGCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
3UTR GCA 72 bp TTCCATCCAACAGCTTGCCCGCTGCCCTCCAGGTTTTaGCTGGACAATCCCCAGGGATTGAGGCAGGGAGTC +
Preference number: 3 (lower is better)
Translates to: FHPTACPLPSRF*LDNPQGLRQGV
Trigger: GACTCCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCAAGCTGTTGGATGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
3UTR GCA 72 bp CGAGGGTCTCTCTGTTCCATCCAACAGCTTGCCCGCTaGCCTCCAGGTTTTGCCTGGACAATCCCCAGGGAT +
Preference number: 3 (lower is better)
Translates to: RGSLCSIQQLAR*PPGFAWTIPRD
Trigger: ATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCAAGCTGTTGGATGGAACAGAGAGACCCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
3UTR GCA 72 bp CTTCTTGAGTGTCCGTCCCCTTGGGCCCTAGTCAGCTaGGAGGGTCTCTCTGTTCCATCCAACAGCTTGCCC +
Preference number: 3 (lower is better)
Translates to: LLECPSPWALVS*EGLSVPSNSLP
Trigger: GGGCAAGCTGTTGGATGGAACAGAGAGACCCTCGCAGCTGACTAGGGCCCAAGGGGACGGACACTCAAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
3UTR CCA 72 bp CCTGGGGCCACCTCAGACTCACATGAAAGATGGATGTaGCCGAGGCCACCAGCACCACAGAAACTGAGGGAC +
Preference number: 3 (lower is better)
Translates to: PGATSDSHERWM*PRPPAPQKLRD
Trigger: GTCCCTCAGTTTCTGTGGTGCTGGTGGCCTCGGCCACATCCATCTTTCATGTGAGTCTGAGGTGGCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
3UTR GCA 72 bp GAGAAGGAGTCTGAGTCCCAGCTCGGAGGAGAACCATaGCACAACAGAACAGTCCCGCAGCCTCCGATAACT +
Preference number: 3 (lower is better)
Translates to: EKESESQLGGEP*HNRTVPQPPIT
Trigger: AGTTATCGGAGGCTGCGGGACTGTTCTGTTGTGGCATGGTTCTCCTCCGAGCTGGGACTCAGACTCCTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
3UTR CCA 72 bp CTCCCAATTTTACATCTTCTTGAGTGTCCGTCCCCTTaGGCCCTAGTCAGCTGCGAGGGTCTCTCTGTTCCA +
Preference number: 3 (lower is better)
Translates to: LPILHLLECPSP*ALVSCEGLSVP
Trigger: TGGAACAGAGAGACCCTCGCAGCTGACTAGGGCCCAAGGGGACGGACACTCAAGAAGATGTAAAATTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp CAGTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAAAGCCGCCCGGGTGGCGTGGTaGACCAGGCCGGCCCCCAGA +
Preference number: 4 (lower is better)
Translates to: QWRKPERAGCRIGPCGKAARVAW*TRPAPR
Trigger: TCTGGGGGCCGGCCTGGTTCACCACGCCACCCGGGC...GGCTTTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCACTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR TCA 90 bp TGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCCCGGCCCCCGGGGGCCACCTCTaGGGCCTCCGCAGACCCTGC +
Preference number: 4 (lower is better)
Translates to: CGKATGLGLRPVLLPFPAPGGHL*GLRRPC
Trigger: GCAGGGTCTGCGGAGGCCTCAGAGGTGGCCCCCGGG...GGCCGGGAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp GGCCCTTGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCCCCGGGGGCCACCTCTaGGGCCTCCGCAGACCCTGC +
Preference number: 4 (lower is better)
Translates to: GPCGKATGLGLRPVLLPFPGGHL*GLRRPC
Trigger: GCAGGGTCTGCGGAGGCCTCAGAGGTGGCCCCCGGG...GAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACAAGGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CCATGCCCAGCACCATGCCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGACTGACGGCAGCGTGGTaGAGCGGCCGGGCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: PCPAPCPGILRSTQSPRGLTAAW*SGRAPS
Trigger: GGAGGGAGCCCGGCCGCTGCACCACGCTGCCGTCAG...TCCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGGCATGGTGCTGGGCATGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR GCA 90 bp GCCATGCCCAGCACCATGCCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGGTGGGGAGGCGCCACTaGGTGTCCGCCGGTTCACGC +
Preference number: 4 (lower is better)
Translates to: AMPSTMPRNTPQHPEPPRVGRRH*VSAGSR
Trigger: GCGTGAACCGGCGGACACGCAGTGGCGCCTCCCCAC...CCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGGCATGGTGCTGGGCATGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR GCA 90 bp GCCATGCCCAGCACCATGCCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGGCGCCCAGGCGCGCCTaGAGCTTCCGCACCATCACC +
Preference number: 4 (lower is better)
Translates to: AMPSTMPRNTPQHPEPPRAPRRA*SFRTIT
Trigger: GGTGATGGTGCGGAAGCTGCAGGCGCGCCTGGGCGC...CCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGGCATGGTGCTGGGCATGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp GCCATGCCCAGCACCATGCCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGGGCCTCCGCAGACCCTaGGGGCTCAGCCGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: AMPSTMPRNTPQHPEPPRGLRRP*GLSRWD
Trigger: ATCCCAGCGGCTGAGCCCGCAGGGTCTGCGGAGGCC...CCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGGCATGGTGCTGGGCATGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp TGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCCCGGCCCCACTGACGGCAGCGTaGTGCAGCGGCCGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: CGKATGLGLRPVLLPFPAPLTAA*CSGRAP
Trigger: GGGAGCCCGGCCGCTGCACCACGCTGCCGTCAGTGG...GGCCGGGAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR TCA 90 bp CCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGAGTCCCCCCAGAGCATCGGTaGTGCCCGGGCCCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: PLPSRFCLDNPQGLRQGVPPEHR*CPGPGR
Trigger: GCGCCCTGGGCCCGGGCATCACCGATGCTCTGGGGG...GACTCCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGG
69% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR TCA 90 bp TGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGACCCCCAGAGCATCGGTaGTGCCCGGGCCCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: CPLPSRFCLDNPQGLRQGPPEHR*CPGPGR
Trigger: GCGCCCTGGGCCCGGGCATCACCGATGCTCTGGGGG...TCCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR TCA 90 bp ACTCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCCCGGGGGCCACCTCTaGGGCCTCCGCAGACCCTGC +
Preference number: 4 (lower is better)
Translates to: TPQHPEPPRTESISLPVSPGGHL*GLRRPC
Trigger: GCAGGGTCTGCGGAGGCCTCAGAGGTGGCCCCCGGG...GGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp GCCATGCCCAGCACCATGCCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGTGCAGGCCACTGTCTTaGGGGCCGGCGTGTAGGCCG +
Preference number: 4 (lower is better)
Translates to: AMPSTMPRNTPQHPEPPRCRPLS*GPACRP
Trigger: CGGCCTACACGCCGGCCCTCAAGACAGTGGCCTGCA...CCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGGCATGGTGCTGGGCATGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp GTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAAAGCCACGTGGGGAGGCGCCACTaGGTGTCCGCCGGTTCACGC +
Preference number: 4 (lower is better)
Translates to: VEEAGAGRLQDRPLWKSHVGRRH*VSAGSR
Trigger: GCGTGAACCGGCGGACACGCAGTGGCGCCTCCCCAC...GTGGCTTTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR GCA 90 bp TGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCCCGGCCGTGGCCGCCTCGGGCTaGAAAGTGCAGGGCCGTGGC +
Preference number: 4 (lower is better)
Translates to: CGKATGLGLRPVLLPFPAVAASG*KVQGRG
Trigger: GCCACGGCCCTGCACTTTGCAGCCCGAGGCGGCCAC...GGCCGGGAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR GCA 90 bp CAGTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAAAGCCCTCTGCGGAGCTCTCTaGGCCCAGGCGCGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: QWRKPERAGCRIGPCGKALCGAL*AQARLQ
Trigger: CTGCAGGCGCGCCTGGGCGCAGAGAGCTCCGCAGAG...GGCTTTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCACTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CTGATAAGCCTGTCGCCTGACTGCACCCTCCTCTGTCCCAGGGGGCCTGGATGCGGTGGCCAGCCCGGGTaGCGTGGTGAACCAGGCCGG +
Preference number: 4 (lower is better)
Translates to: LISLSPDCTLLCPRGPGCGGQPG*RGEPGR
Trigger: CCGGCCTGGTTCACCACGCCACCCGGGCTGGCCACC...GCATCCAGGCCCCCTGGGACAGAGGAGGGTGCAGTCAGGCGACAGGCTTATCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR CCA 90 bp GTCCCAGGGGGCCTGGATGCCAGGAGGAATATTCCTGAAGCCTCCCGTCCCTGCCGGCCAGGCTGCCCGTaGCAGCGGCGTCATGCGCTG +
Preference number: 4 (lower is better)
Translates to: VPGGLDARRNIPEASRPCRPGCP*QRRHAL
Trigger: CAGCGCATGACGCCGCTGCCACGGGCAGCCTGGCCG...GCAGGGACGGGAGGCTTCAGGAATATTCCTCCTGGCATCCAGGCCCCCTGGGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR CCA 90 bp CTGATAAGCCTGTCGCCTGACTGCACCCTCCTCTGTCCCAGGGGGCCTGGATGCCCACTGACGGCAGCGTaGTGCAGCGGCCGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: LISLSPDCTLLCPRGPGCPLTAA*CSGRAP
Trigger: GGGAGCCCGGCCGCTGCACCACGCTGCCGTCAGTGG...GCATCCAGGCCCCCTGGGACAGAGGAGGGTGCAGTCAGGCGACAGGCTTATCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR CCA 90 bp GTCCCAGGGGGCCTGGATGCCAGGAGGAATATTCCTGAAGCCTCCCGTCCCTGCCCCCGCAACCCCGCGTaGCGGGCTCCTAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: VPGGLDARRNIPEASRPCPRNPA*RAPRVL
Trigger: CAGGACCCTAGGAGCCCGCCACGCGGGGTTGCGGGG...GCAGGGACGGGAGGCTTCAGGAATATTCCTCCTGGCATCCAGGCCCCCTGGGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CAGTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAAAGCCCCAGCCGCTGTGCTGTaGGCTCAGGGCCGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: QWRKPERAGCRIGPCGKAPAAVL*AQGRCR
Trigger: CCTGCAGCGGCCCTGAGCCCACAGCACAGCGGCTGG...GGCTTTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCACTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp GCCATGCCCAGCACCATGCCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGGCTGGGGCACTGGCCTaGCGGGCATCGGTGTGTGAC +
Preference number: 4 (lower is better)
Translates to: AMPSTMPRNTPQHPEPPRAGALA*RASVCD
Trigger: GTCACACACCGATGCCCGCCAGGCCAGTGCCCCAGC...CCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGGCATGGTGCTGGGCATGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp CAGTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAAAGCCAGGTCAGGTCCCCACTaGCGGCAGCGTGGTGCAGCG +
Preference number: 4 (lower is better)
Translates to: QWRKPERAGCRIGPCGKARSGPH*RQRGAA
Trigger: CGCTGCACCACGCTGCCGTCAGTGGGGACCTGACCT...GGCTTTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR TCA 90 bp TGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGATGCGGCCAGGCCATCTaGGGTGTCCCCCGCCAGCGC +
Preference number: 4 (lower is better)
Translates to: CPLPSRFCLDNPQGLRQGCGQAI*GVPRQR
Trigger: GCGCTGGCGGGGGACACCTCAGATGGCCTGGCCGCA...TCCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp GGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACCCTGCCTGCGGCCAGGCCATCTaGGGTGTCCCCCGCCAGCGC +
Preference number: 4 (lower is better)
Translates to: GILLCVQQPLRVGTSHPACGQAI*GVPRQR
Trigger: GCGCTGGCGGGGGACACCTCAGATGGCCTGGCCGCA...GGCAGGGTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp CAGTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAAAGCCTGCGGCACCCGCCTCTaGTGGCACCTCCTCGCAGCT +
Preference number: 4 (lower is better)
Translates to: QWRKPERAGCRIGPCGKACGTRL*WHLLAA
Trigger: AGCTGCGAGGAGGTGCCATCAGAGGCGGGTGCCGCA...GGCTTTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp GTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAAAGCCACTGCAGGCCACTGTCTTaGGGGCCGGCGTGTAGGCCG +
Preference number: 4 (lower is better)
Translates to: VEEAGAGRLQDRPLWKSHCRPLS*GPACRP
Trigger: CGGCCTACACGCCGGCCCTCAAGACAGTGGCCTGCA...GTGGCTTTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp GTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAAAGCCACTGCCGGGCGGGCACGTaGGCCATGATGGCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: VEEAGAGRLQDRPLWKSHCRAGT*AMMAFQ
Trigger: CTGGAAGGCCATCATGGCTCACGTGCCCGCCCGGCA...GTGGCTTTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp GTCCCAGGGGGCCTGGATGCCAGGAGGAATATTCCTGAAGCCTCCCGTCCCTGCAAACGGGCGGCCAGGTaGAGCGGGGAGACGCCCGAG +
Preference number: 4 (lower is better)
Translates to: VPGGLDARRNIPEASRPCKRAAR*SGETPE
Trigger: CTCGGGCGTCTCCCCGCTGCACCTGGCCGCCCGTTT...GCAGGGACGGGAGGCTTCAGGAATATTCCTCCTGGCATCCAGGCCCCCTGGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR GCA 90 bp GCTGCTGCCCACCCCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTCTGACGGCAGCGTGGTaGAGCGGCCGGGCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: AAAHPCRHSPLCAAAFESLTAAW*SGRAPS
Trigger: GGAGGGAGCCCGGCCGCTGCACCACGCTGCCGTCAG...ACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGGGGTGGGCAGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR GCA 90 bp CCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGAGTCCGGGCGGCGGCAGCGTaGAGGGCGCTCATGCCATCG +
Preference number: 4 (lower is better)
Translates to: PLPSRFCLDNPQGLRQGVRAAAA*RALMPS
Trigger: CGATGGCATGAGCGCCCTGCACGCTGCCGCCGCCCG...GACTCCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR GCA 90 bp TGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGACGGGCGGCGGCAGCGTaGAGGGCGCTCATGCCATCG +
Preference number: 4 (lower is better)
Translates to: CPLPSRFCLDNPQGLRQGRAAAA*RALMPS
Trigger: CGATGGCATGAGCGCCCTGCACGCTGCCGCCGCCCG...TCCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR GCA 90 bp CTGATAAGCCTGTCGCCTGACTGCACCCTCCTCTGTCCCAGGGGGCCTGGATGCGCGCCCAGGCGCGCCTaGAGCTTCCGCACCATCACC +
Preference number: 4 (lower is better)
Translates to: LISLSPDCTLLCPRGPGCAPRRA*SFRTIT
Trigger: GGTGATGGTGCGGAAGCTGCAGGCGCGCCTGGGCGC...GCATCCAGGCCCCCTGGGACAGAGGAGGGTGCAGTCAGGCGACAGGCTTATCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CCATGCCCAGCACCATGCCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGATACCTCCAGGCCGCCTaGTCCGTGGGGCCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: PCPAPCPGILRSTQSPRGYLQAA*SVGPEL
Trigger: GAGCTCAGGCCCCACGGAGCAGGCGGCCTGGAGGTA...TCCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGGCATGGTGCTGGGCATGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp TCAGCAGTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAATCGGGCAGCAGGGCCTaGAGCTCAGCCGCCAACCGG +
Preference number: 4 (lower is better)
Translates to: SAVEEAGAGRLQDRPLWKSGSRA*SSAANR
Trigger: CCGGTTGGCGGCTGAGCTGCAGGCCCTGCTGCCCGA...TTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCACTGCTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp GCCATGCCCAGCACCATGCCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGAGGCCGACTCGAAGTTaGCCCGCAGCGTCCGCACAG +
Preference number: 4 (lower is better)
Translates to: AMPSTMPRNTPQHPEPPRRPTRS*PAASAQ
Trigger: CTGTGCGGACGCTGCGGGGCAACTTCGAGTCGGCCT...CCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGGCATGGTGCTGGGCATGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp TCAGCAGTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAACAGCCACTCAGGCACTaGCTGTGCTGGGCCCCCGGC +
Preference number: 4 (lower is better)
Translates to: SAVEEAGAGRLQDRPLWKQPLRH*LCWAPG
Trigger: GCCGGGGGCCCAGCACAGGCAGTGCCTGAGTGGCTG...TTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCACTGCTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp TGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGATGGGCTCAGGGCCGCTaGAGGGGACGGCGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: CPLPSRFCLDNPQGLRQGWAQGR*RGRRRE
Trigger: CTCACGCCGCCGTCCCCTGCAGCGGCCCTGAGCCCA...TCCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTTGGGCTCAGGGCCGCTaGAGGGGACGGCGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: PRNTPQHPEPPRTESISLWAQGR*RGRRRE
Trigger: CTCACGCCGCCGTCCCCTGCAGCGGCCCTGAGCCCA...AAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACCCGGCTGGGCAGAGGTaGCCTGGACTGGGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: PAGILLCVQQPLRVGTSHPAGQR*PGLGWP
Trigger: GGGCCACCCCAGTCCAGGGCACCTCTGCCCAGCCGG...GTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp AGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCTCCCTCCCGGCTGGGCAGAGGTaGCCTGGACTGGGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: STQSPRGRNPSPFLYPSLPAGQR*PGLGWP
Trigger: GGGCCACCCCAGTCCAGGGCACCTCTGCCCAGCCGG...GAGGGAGGGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp ACTCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCCGGCTGGGCAGAGGTaGCCTGGACTGGGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: TPQHPEPPRTESISLPVSPAGQR*PGLGWP
Trigger: GGGCCACCCCAGTCCAGGGCACCTCTGCCCAGCCGG...GGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp TCAGCAGTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAATGGGGCTGCGGCCGGTaGTACTTCCCTTCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: SAVEEAGAGRLQDRPLWKWGCGR*YFPSRP
Trigger: GGGCCGGGAAGGGAAGTAGCACCGGCCGCAGCCCCA...TTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCACTGCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACGGTGGCCAGCCCGGGTaGCGTGGTGAACCAGGCCGG +
Preference number: 4 (lower is better)
Translates to: PAGILLCVQQPLRVGTSHGGQPG*RGEPGR
Trigger: CCGGCCTGGTTCACCACGCCACCCGGGCTGGCCACC...GTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR CCA 90 bp GGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACCCTGCCCGGCCAGGCTGCCCGTaGCAGCGGCGTCATGCGCTG +
Preference number: 4 (lower is better)
Translates to: GILLCVQQPLRVGTSHPARPGCP*QRRHAL
Trigger: CAGCGCATGACGCCGCTGCCACGGGCAGCCTGGCCG...GGCAGGGTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR CCA 90 bp GCCATGCCCAGCACCATGCCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGGGAGTCGGTCTAGAATaGGCGTGTGGCCGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: AMPSTMPRNTPQHPEPPRGVGLE*ACGRLG
Trigger: CCCGAGGCGGCCACACGCCCATTCTAGACCGACTCC...CCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGGCATGGTGCTGGGCATGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR CCA 90 bp TGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCCCGGCCGGGGAACGGTGGTGGTaGGGGCGTCATCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: CGKATGLGLRPVLLPFPAGERWW*GRHQQG
Trigger: CCCCTGCTGATGACGCCCCCACCACCACCGTTCCCC...GGCCGGGAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000612395.1
CDS-3UTR CCA 90 bp TGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCCCGGCCCCAGGGAGCGCCTCGTaGCCAACAGTGGAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: CGKATGLGLRPVLLPFPAPGSAS*PTVEVG
Trigger: CCCCACCTCCACTGTTGGCCACGAGGCGCTCCCTGG...GGCCGGGAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000612395.1
CDS-3UTR CCA 90 bp GTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAAAGCCACCCAGGGAGCGCCTCGTaGCCAACAGTGGAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: VEEAGAGRLQDRPLWKSHPGSAS*PTVEVG
Trigger: CCCCACCTCCACTGTTGGCCACGAGGCGCTCCCTGG...GTGGCTTTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000612395.1
CDS-3UTR CCA 90 bp GGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACCCTGCCAGGCACTGCCTGTGCTaGGCCCCCGGCTCGCAGGGG +
Preference number: 4 (lower is better)
Translates to: GILLCVQQPLRVGTSHPARHCLC*APGSQG
Trigger: CCCCTGCGAGCCGGGGGCCCAGCACAGGCAGTGCCT...GGCAGGGTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp GCTGCTGCCCACCCCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTAGGCACTGCCTGTGCTaGGCCCCCGGCTCGCAGGGG +
Preference number: 4 (lower is better)
Translates to: AAAHPCRHSPLCAAAFESRHCLC*APGSQG
Trigger: CCCCTGCGAGCCGGGGGCCCAGCACAGGCAGTGCCT...ACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGGGGTGGGCAGCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp ACTCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCAGGCACTGCCTGTGCTaGGCCCCCGGCTCGCAGGGG +
Preference number: 4 (lower is better)
Translates to: TPQHPEPPRTESISLPVSRHCLC*APGSQG
Trigger: CCCCTGCGAGCCGGGGGCCCAGCACAGGCAGTGCCT...GGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp GCCATGCCCAGCACCATGCCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGGGGCTTAGGCAGGGCTaGCCAGCAGCCACTCAGGCA +
Preference number: 4 (lower is better)
Translates to: AMPSTMPRNTPQHPEPPRGLRQG*PAATQA
Trigger: TGCCTGAGTGGCTGCTGGCCAGCCCTGCCTAAGCCC...CCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGGCATGGTGCTGGGCATGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CTGTCCCAGGGGGCCTGGATGCCAGGAGGAATATTCCTGAAGCCTCCCGTCCCTCCCCGCAACCCCGCGTaGCGGGCTCCTAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LSQGAWMPGGIFLKPPVPPRNPA*RAPRVL
Trigger: CAGGACCCTAGGAGCCCGCCACGCGGGGTTGCGGGG...AGGGACGGGAGGCTTCAGGAATATTCCTCCTGGCATCCAGGCCCCCTGGGACAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp GCCATGCCCAGCACCATGCCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGACAGCCTCCCAGCCGTaGGTGCCCAGGTGCTCGAAG +
Preference number: 4 (lower is better)
Translates to: AMPSTMPRNTPQHPEPPRTASQP*VPRCSK
Trigger: CTTCGAGCACCTGGGCACCCACGGCTGGGAGGCTGT...CCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGGCATGGTGCTGGGCATGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp GCCATGCCCAGCACCATGCCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGTCCCAGGCGGGACGCTaGCTGGAGCCAAAGAAGCGG +
Preference number: 4 (lower is better)
Translates to: AMPSTMPRNTPQHPEPPRSQAGR*LEPKKR
Trigger: CCGCTTCTTTGGCTCCAGCCAGCGTCCCGCCTGGGA...CCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGGCATGGTGCTGGGCATGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CAGTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAAAGCCGCTGGGGCACTGGCCTaGCGGGCATCGGTGTGTGAC +
Preference number: 4 (lower is better)
Translates to: QWRKPERAGCRIGPCGKAAGALA*RASVCD
Trigger: GTCACACACCGATGCCCGCCAGGCCAGTGCCCCAGC...GGCTTTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp CAGAGCCTGGGTGATGACCCATTCTCCTGGCTGCCATCAGAAGCTGGGGACAAGGCCCGGGTGGCGTGGTaGACCAGGCCGGCCCCCAGA +
Preference number: 4 (lower is better)
Translates to: QSLGDDPFSWLPSEAGDKARVAW*TRPAPR
Trigger: TCTGGGGGCCGGCCTGGTTCACCACGCCACCCGGGC...CTTGTCCCCAGCTTCTGATGGCAGCCAGGAGAATGGGTCATCACCCAGGCTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR TCA 90 bp TTGAGGCAGGGAGTCCTGATAAGCCTGTCGCCTGACTGCACCCTCCTCTGTCCCTGCGGCCAGGCCATCTaGGGTGTCCCCCGCCAGCGC +
Preference number: 4 (lower is better)
Translates to: LRQGVLISLSPDCTLLCPCGQAI*GVPRQR
Trigger: GCGCTGGCGGGGGACACCTCAGATGGCCTGGCCGCA...GGGACAGAGGAGGGTGCAGTCAGGCGACAGGCTTATCAGGACTCCCTGCCTCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp GTCCCAGGGGGCCTGGATGCCAGGAGGAATATTCCTGAAGCCTCCCGTCCCTGCCCCGTCGATGTCGCCTaGGGGCAGCCCATCCAGCTG +
Preference number: 4 (lower is better)
Translates to: VPGGLDARRNIPEASRPCPVDVA*GQPIQL
Trigger: CAGCTGGATGGGCTGCCCTCAGGCGACATCGACGGG...GCAGGGACGGGAGGCTTCAGGAATATTCCTCCTGGCATCCAGGCCCCCTGGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp CTGATAAGCCTGTCGCCTGACTGCACCCTCCTCTGTCCCAGGGGGCCTGGATGCCCCGTCGATGTCGCCTaGGGGCAGCCCATCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LISLSPDCTLLCPRGPGCPVDVA*GQPIQL
Trigger: CAGCTGGATGGGCTGCCCTCAGGCGACATCGACGGG...GCATCCAGGCCCCCTGGGACAGAGGAGGGTGCAGTCAGGCGACAGGCTTATCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp TGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCCCGGCCCTGCTCCGTGGGGCCTaGGCTCCCACCATTGTCCTG +
Preference number: 4 (lower is better)
Translates to: CGKATGLGLRPVLLPFPALLRGA*APTIVL
Trigger: CAGGACAATGGTGGGAGCTCAGGCCCCACGGAGCAG...GGCCGGGAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp GGTGATGACCCATTCTCCTGGCTGCCATCAGAAGCTGGGGACAAGCCACACCCTCCCGGGGGCCACCTCTaGGGCCTCCGCAGACCCTGC +
Preference number: 4 (lower is better)
Translates to: GDDPFSWLPSEAGDKPHPPGGHL*GLRRPC
Trigger: GCAGGGTCTGCGGAGGCCTCAGAGGTGGCCCCCGGG...AGGGTGTGGCTTGTCCCCAGCTTCTGATGGCAGCCAGGAGAATGGGTCATCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp TCAGCAGTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAACGCAGGGGCCAGGGTTaGAGCCACAGAGTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: SAVEEAGAGRLQDRPLWKRRGQG*SHRVGQ
Trigger: CTGGCCCACTCTGTGGCTTCAACCCTGGCCCCTGCG...TTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCACTGCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp TGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCCCGGCCGCACCTCCTCGCAGCTaGTGCCAGAGTCGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: CGKATGLGLRPVLLPFPAAPPRS*CQSRWP
Trigger: AGGCCAGCGACTCTGGCATCAGCTGCGAGGAGGTGC...GGCCGGGAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp GTCCCAGGGGGCCTGGATGCCAGGAGGAATATTCCTGAAGCCTCCCGTCCCTGCTGCCCAGCAGGTGGGTaGTGGTGCTGCGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: VPGGLDARRNIPEASRPCCPAGG*WCCAAA
Trigger: GGCAGCAGCGCAGCACCATCACCCACCTGCTGGGCA...GCAGGGACGGGAGGCTTCAGGAATATTCCTCCTGGCATCCAGGCCCCCTGGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp TGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCCCGGCCGAGCAGGGTCAGACCTaGCTTGCGGCCAGGCTCCGT +
Preference number: 4 (lower is better)
Translates to: CGKATGLGLRPVLLPFPAEQGQT*LAARLR
Trigger: ACGGAGCCTGGCCGCAAGTCAGGTCTGACCCTGCTC...GGCCGGGAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp GTCCCAGGGGGCCTGGATGCCAGGAGGAATATTCCTGAAGCCTCCCGTCCCTGCGCGGGCATCGGTGTGTaGCCAGCAGGGATGGCCTGG +
Preference number: 4 (lower is better)
Translates to: VPGGLDARRNIPEASRPCAGIGV*PAGMAW
Trigger: CCAGGCCATCCCTGCTGGTCACACACCGATGCCCGC...GCAGGGACGGGAGGCTTCAGGAATATTCCTCCTGGCATCCAGGCCCCCTGGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp TGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCCCGGCCGCCACGAGTGCCCGCTaGTTCTCCATCCTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: CGKATGLGLRPVLLPFPAATSAR*FSILWP
Trigger: GGGCCAGAGGATGGAGAAGCAGCGGGCACTCGTGGC...GGCCGGGAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343063.8
CDS-3UTR GCA 90 bp ACTCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCGTGGCCGCCTCGGGCTaGAAAGTGCAGGGCCGTGGC +
Preference number: 4 (lower is better)
Translates to: TPQHPEPPRTESISLPVSVAASG*KVQGRG
Trigger: GCCACGGCCCTGCACTTTGCAGCCCGAGGCGGCCAC...GGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR GCA 90 bp CTGTCCCAGGGGGCCTGGATGCCAGGAGGAATATTCCTGAAGCCTCCCGTCCCTGCGCCCAGGCGCGCCTaGAGCTTCCGCACCATCACC +
Preference number: 4 (lower is better)
Translates to: LSQGAWMPGGIFLKPPVPAPRRA*SFRTIT
Trigger: GGTGATGGTGCGGAAGCTGCAGGCGCGCCTGGGCGC...AGGGACGGGAGGCTTCAGGAATATTCCTCCTGGCATCCAGGCCCCCTGGGACAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp TTGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGGCGCCCAGGCGCGCCTaGAGCTTCCGCACCATCACC +
Preference number: 4 (lower is better)
Translates to: LPAALQVLPGQSPGIEAGAPRRA*SFRTIT
Trigger: GGTGATGGTGCGGAAGCTGCAGGCGCGCCTGGGCGC...CCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CCCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACTCTGCGGAGCTCTCTaGGCCCAGGCGCGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: PCRHSPLCAAAFESGHQPLCGAL*AQARLQ
Trigger: CTGCAGGCGCGCCTGGGCGCAGAGAGCTCCGCAGAG...TGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp GTCCCAGGGGGCCTGGATGCCAGGAGGAATATTCCTGAAGCCTCCCGTCCCTGCTACCTCCAGGCCGCCTaGTCCGTGGGGCCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: VPGGLDARRNIPEASRPCYLQAA*SVGPEL
Trigger: GAGCTCAGGCCCCACGGAGCAGGCGGCCTGGAGGTA...GCAGGGACGGGAGGCTTCAGGAATATTCCTCCTGGCATCCAGGCCCCCTGGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp AGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCTCCCTCTCGGGCAGCAGGGCCTaGAGCTCAGCCGCCAACCGG +
Preference number: 4 (lower is better)
Translates to: STQSPRGRNPSPFLYPSLSGSRA*SSAANR
Trigger: CCGGTTGGCGGCTGAGCTGCAGGCCCTGCTGCCCGA...GAGGGAGGGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTTCGGGCAGCAGGGCCTaGAGCTCAGCCGCCAACCGG +
Preference number: 4 (lower is better)
Translates to: PRNTPQHPEPPRTESISLSGSRA*SSAANR
Trigger: CCGGTTGGCGGCTGAGCTGCAGGCCCTGCTGCCCGA...AAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CCCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCAGGCCTCCGCAGACCCTaGGGGCTCAGCCGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: PCRHSPLCAAAFESGHQPGLRRP*GLSRWD
Trigger: ATCCCAGCGGCTGAGCCCGCAGGGTCTGCGGAGGCC...TGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp TGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCCCGGCCAGGCCGACTCGAAGTTaGCCCGCAGCGTCCGCACAG +
Preference number: 4 (lower is better)
Translates to: CGKATGLGLRPVLLPFPARPTRS*PAASAQ
Trigger: CTGTGCGGACGCTGCGGGGCAACTTCGAGTCGGCCT...GGCCGGGAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp AGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCTCCCTCCTCAGGCACTGCCTGTaGTGGGCCCCCGGCTCGCAG +
Preference number: 4 (lower is better)
Translates to: STQSPRGRNPSPFLYPSLLRHCL*WAPGSQ
Trigger: CTGCGAGCCGGGGGCCCAGCACAGGCAGTGCCTGAG...GAGGGAGGGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp TTGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGCAGCCACTCAGGCACTaGCTGTGCTGGGCCCCCGGC +
Preference number: 4 (lower is better)
Translates to: LPAALQVLPGQSPGIEAGQPLRH*LCWAPG
Trigger: GCCGGGGGCCCAGCACAGGCAGTGCCTGAGTGGCTG...CCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp AGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCTCCCTCCAGCCACTCAGGCACTaGCTGTGCTGGGCCCCCGGC +
Preference number: 4 (lower is better)
Translates to: STQSPRGRNPSPFLYPSLQPLRH*LCWAPG
Trigger: GCCGGGGGCCCAGCACAGGCAGTGCCTGAGTGGCTG...GAGGGAGGGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CCCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACAGCCACTCAGGCACTaGCTGTGCTGGGCCCCCGGC +
Preference number: 4 (lower is better)
Translates to: PCRHSPLCAAAFESGHQPQPLRH*LCWAPG
Trigger: GCCGGGGGCCCAGCACAGGCAGTGCCTGAGTGGCTG...TGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp TGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCCCGGCCCCTCCCAGCCGTGGGTaGCCAGGTGCTCGAAGACCT +
Preference number: 4 (lower is better)
Translates to: CGKATGLGLRPVLLPFPAPPSRG*PGARRP
Trigger: AGGTCTTCGAGCACCTGGGCACCCACGGCTGGGAGG...GGCCGGGAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CTGTCCCAGGGGGCCTGGATGCCAGGAGGAATATTCCTGAAGCCTCCCGTCCCTGGACCCCAGCCGCTGTaGTGTGGGCTCAGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: LSQGAWMPGGIFLKPPVPGPQPL*CGLRAA
Trigger: AGCGGCCCTGAGCCCACAGCACAGCGGCTGGGGTCC...AGGGACGGGAGGCTTCAGGAATATTCCTCCTGGCATCCAGGCCCCCTGGGACAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTGGACCCCAGCCGCTGTaGTGTGGGCTCAGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: PRNTPQHPEPPRTESISLGPQPL*CGLRAA
Trigger: AGCGGCCCTGAGCCCACAGCACAGCGGCTGGGGTCC...AAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp GCCATGCCCAGCACCATGCCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGGACTGGAGGCAGCCTTaGCCGGCTCACCTGAACACC +
Preference number: 4 (lower is better)
Translates to: AMPSTMPRNTPQHPEPPRDWRQP*PAHLNT
Trigger: GGTGTTCAGGTGAGCCGGGCAAGGCTGCCTCCAGTC...CCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGGCATGGTGCTGGGCATGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CCCATTGCCTCACTTCAGGACCTGCCAAGGGGCTTCCTGGGTGCAGTGGTGAGACCGGCTGGGCAGAGGTaGCCTGGACTGGGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: PIASLQDLPRGFLGAVVRPAGQR*PGLGWP
Trigger: GGGCCACCCCAGTCCAGGGCACCTCTGCCCAGCCGG...TCTCACCACTGCACCCAGGAAGCCCCTTGGCAGGTCCTGAAGTGAGGCAATGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR GCA 90 bp GCTGCTGCCCACCCCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTTGGGGCTGCGGCCGGTaGTACTTCCCTTCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: AAAHPCRHSPLCAAAFESWGCGR*YFPSRP
Trigger: GGGCCGGGAAGGGAAGTAGCACCGGCCGCAGCCCCA...ACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGGGGTGGGCAGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp AGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCTCCCTCTGGGGCTGCGGCCGGTaGTACTTCCCTTCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: STQSPRGRNPSPFLYPSLWGCGR*YFPSRP
Trigger: GGGCCGGGAAGGGAAGTAGCACCGGCCGCAGCCCCA...GAGGGAGGGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CAGTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAAAGCCCCACTGGCTTGGGGCTaGGGCCGGTGCTACTTCCCT +
Preference number: 4 (lower is better)
Translates to: QWRKPERAGCRIGPCGKAPLAWG*GRCYFP
Trigger: AGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGG...GGCTTTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CCATGCCCAGCACCATGCCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGACCACTGGCTTGGGGCTaGGGCCGGTGCTACTTCCCT +
Preference number: 4 (lower is better)
Translates to: PCPAPCPGILRSTQSPRGPLAWG*GRCYFP
Trigger: AGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGG...TCCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGGCATGGTGCTGGGCATGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp ACTCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCGTCATGCGCTGGGGTaGCCCCGTTGTGGGCCCGCT +
Preference number: 4 (lower is better)
Translates to: TPQHPEPPRTESISLPVSRHALG*PRCGPA
Trigger: AGCGGGCCCACAACGGGGCCACCCCAGCGCATGACG...GGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR CCA 90 bp CCCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACGTCATGCGCTGGGGTaGCCCCGTTGTGGGCCCGCT +
Preference number: 4 (lower is better)
Translates to: PCRHSPLCAAAFESGHQPRHALG*PRCGPA
Trigger: AGCGGGCCCACAACGGGGCCACCCCAGCGCATGACG...TGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR CCA 90 bp GCTGCTGCCCACCCCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTAGCGGCGTCATGCGCTaGGGTGGCCCCGTTGTGGGC +
Preference number: 4 (lower is better)
Translates to: AAAHPCRHSPLCAAAFESSGVMR*GGPVVG
Trigger: GCCCACAACGGGGCCACCCCAGCGCATGACGCCGCT...ACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGGGGTGGGCAGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR CCA 90 bp CAGTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAAAGCCTCGGAGGGGCCGGGCTaGTCATCTGCTCCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: QWRKPERAGCRIGPCGKASEGPG*SSAPWE
Trigger: TTCCCAGGGAGCAGATGACCAGCCCGGCCCCTCCGA...GGCTTTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CCATGCCCAGCACCATGCCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGAGCTTCCACTCTGGGATaGGCTGGCCGCGCTCATCCC +
Preference number: 4 (lower is better)
Translates to: PCPAPCPGILRSTQSPRGASTLG*AGRAHP
Trigger: GGGATGAGCGCGGCCAGCCCATCCCAGAGTGGAAGC...TCCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGGCATGGTGCTGGGCATGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp GGCCCTTGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCAGGCCGCCTGCTCCGTaGGGCCTGAGCTCCCACCAT +
Preference number: 4 (lower is better)
Translates to: GPCGKATGLGLRPVLLPFRPPAP*GLSSHH
Trigger: ATGGTGGGAGCTCAGGCCCCACGGAGCAGGCGGCCT...GAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACAAGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp TCAGCAGTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAACCCCACTCCTGGATCTaGCGCTGGGCCTCGCTCCGA +
Preference number: 4 (lower is better)
Translates to: SAVEEAGAGRLQDRPLWKPHSWI*RWASLR
Trigger: TCGGAGCGAGGCCCAGCGCCAGATCCAGGAGTGGGG...TTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCACTGCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp TCCTGTATCCCTCCCTCCAGTACCCAGGCCCCTGTGAAGAGGTGCACTGTGGGTAGGCACTGCCTGTGCTaGGCCCCCGGCTCGCAGGGG +
Preference number: 4 (lower is better)
Translates to: SCIPPSSTQAPVKRCTVGRHCLC*APGSQG
Trigger: CCCCTGCGAGCCGGGGGCCCAGCACAGGCAGTGCCT...ACCCACAGTGCACCTCTTCACAGGGGCCTGGGTACTGGAGGGAGGGATACAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp GGCCCTTGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCCTGTGTCGCCAGGCCTaGGCTCCCCTGAAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: GPCGKATGLGLRPVLLPFLCRQA*APLKPG
Trigger: GCCTGGCTTCAGGGGAGCCCAGGCCTGGCGACACAG...GAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACAAGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp TCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCTGCTCCTTGCGCAGGCTaGCCAGGTCTGGGCCGGCTG +
Preference number: 4 (lower is better)
Translates to: SAAPRAPEDGIHLPSCIPAPCAG*PGLGRL
Trigger: CAGCCGGCCCAGACCTGGCCAGCCTGCGCAAGGAGC...AGGGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp ACTCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCGCTCCTTGCGCAGGCTaGCCAGGTCTGGGCCGGCTG +
Preference number: 4 (lower is better)
Translates to: TPQHPEPPRTESISLPVSAPCAG*PGLGRL
Trigger: CAGCCGGCCCAGACCTGGCCAGCCTGCGCAAGGAGC...GGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp TTGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGGCTCCTTGCGCAGGCTaGCCAGGTCTGGGCCGGCTG +
Preference number: 4 (lower is better)
Translates to: LPAALQVLPGQSPGIEAGAPCAG*PGLGRL
Trigger: CAGCCGGCCCAGACCTGGCCAGCCTGCGCAAGGAGC...CCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp TTGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGGGAGCCCCGTCCACGTaGGGCAGGAACTGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: LPAALQVLPGQSPGIEAGGAPST*GRNCSG
Trigger: CCCCGAGCAGTTCCTGCCCCACGTGGACGGGGCTCC...CCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp AGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCTCCCTCGGAGCCCCGTCCACGTaGGGCAGGAACTGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: STQSPRGRNPSPFLYPSLGAPST*GRNCSG
Trigger: CCCCGAGCAGTTCCTGCCCCACGTGGACGGGGCTCC...GAGGGAGGGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CCCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCAGGAGCCCCGTCCACGTaGGGCAGGAACTGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: PCRHSPLCAAAFESGHQPGAPST*GRNCSG
Trigger: CCCCGAGCAGTTCCTGCCCCACGTGGACGGGGCTCC...TGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp TGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCCCGGCCACAGCCTCCCAGCCGTaGGTGCCCAGGTGCTCGAAG +
Preference number: 4 (lower is better)
Translates to: CGKATGLGLRPVLLPFPATASQP*VPRCSK
Trigger: CTTCGAGCACCTGGGCACCCACGGCTGGGAGGCTGT...GGCCGGGAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CAGTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAAAGCCTCCCAGGCGGGACGCTaGCTGGAGCCAAAGAAGCGG +
Preference number: 4 (lower is better)
Translates to: QWRKPERAGCRIGPCGKASQAGR*LEPKKR
Trigger: CCGCTTCTTTGGCTCCAGCCAGCGTCCCGCCTGGGA...GGCTTTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp GGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACCCTGCCCCAGCCGCTGTGCTGTaGGCTCAGGGCCGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GILLCVQQPLRVGTSHPAPAAVL*AQGRCR
Trigger: CCTGCAGCGGCCCTGAGCCCACAGCACAGCGGCTGG...GGCAGGGTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CCCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACCAGCCGCTGTGCTGTaGGCTCAGGGCCGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PCRHSPLCAAAFESGHQPPAAVL*AQGRCR
Trigger: CCTGCAGCGGCCCTGAGCCCACAGCACAGCGGCTGG...TGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp GTCCCAGGGGGCCTGGATGCCAGGAGGAATATTCCTGAAGCCTCCCGTCCCTGCTTGAAGCTGCCCTGCTaGGAGCGGGACCCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: VPGGLDARRNIPEASRPCLKLPC*ERDPSR
Trigger: GCGGCTGGGGTCCCGCTCCCAGCAGGGCAGCTTCAA...GCAGGGACGGGAGGCTTCAGGAATATTCCTCCTGGCATCCAGGCCCCCTGGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CAGTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAAAGCCGCTCTCCAGCCTTGCTaGGGCCCACGACTAGGCCAG +
Preference number: 4 (lower is better)
Translates to: QWRKPERAGCRIGPCGKAALQPC*GPRLGQ
Trigger: CTGGCCTAGTCGTGGGCCCCAGCAAGGCTGGAGAGC...GGCTTTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp GCCATGCCCAGCACCATGCCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGCCCTGCCTGCCCCAATaGCCAATACCACCCCTCCCA +
Preference number: 4 (lower is better)
Translates to: AMPSTMPRNTPQHPEPPRPCLPQ*PIPPLP
Trigger: TGGGAGGGGTGGTATTGGCCATTGGGGCAGGCAGGG...CCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGGCATGGTGCTGGGCATGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CAGTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAAAGCCCAGGGTCTTCAGCAGTaGAGGAAGCCGGAGCGGGCC +
Preference number: 4 (lower is better)
Translates to: QWRKPERAGCRIGPCGKAQGLQQ*RKPERA
Trigger: GGCCCGCTCCGGCTTCCTCCACTGCTGAAGACCCTG...GGCTTTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACCCCCCGCCTGGTCGATaGGAGAGCCTGCGGCACACC +
Preference number: 4 (lower is better)
Translates to: PAGILLCVQQPLRVGTSHPPPGR*ESLRHT
Trigger: GGTGTGCCGCAGGCTCTCCCATCGACCAGGCGGGGG...GTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000409506.1
CDS-3UTR CCA 90 bp CAGTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAAAGCCCCACTGGACCTTCTCTaGGGAGTCAGTGGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: QWRKPERAGCRIGPCGKAPLDLL*GVSGAR
Trigger: GCGGGCCCCACTGACTCCCCAGAGAAGGTCCAGTGG...GGCTTTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409506.1
3UTR CAA 72 bp GGCTGCAGGATAGGCCCTTGTGGAAAAGCCACTGGCTaGGGGCTGCGGCCGGTGCTACTTCCCTTCCCGGCC +
Preference number: 4 (lower is better)
Translates to: GCRIGPCGKATG*GLRPVLLPFPA
Trigger: GGCCGGGAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACAAGGGCCTATCCTGCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp GGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACCCTGCCCCCGTCGATGTCGCCTaGGGGCAGCCCATCCAGCTG +
Preference number: 4 (lower is better)
Translates to: GILLCVQQPLRVGTSHPAPVDVA*GQPIQL
Trigger: CAGCTGGATGGGCTGCCCTCAGGCGACATCGACGGG...GGCAGGGTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp TGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCCCGGCCGGCCTGATGAGTCTGTaGGTACCTCCAGGCCGCCTG +
Preference number: 4 (lower is better)
Translates to: CGKATGLGLRPVLLPFPAGLMSL*VPPGRL
Trigger: CAGGCGGCCTGGAGGTACTCACAGACTCATCAGGCC...GGCCGGGAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp CTGATAAGCCTGTCGCCTGACTGCACCCTCCTCTGTCCCAGGGGGCCTGGATGCGCACCTCCTCGCAGCTaGTGCCAGAGTCGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: LISLSPDCTLLCPRGPGCAPPRS*CQSRWP
Trigger: AGGCCAGCGACTCTGGCATCAGCTGCGAGGAGGTGC...GCATCCAGGCCCCCTGGGACAGAGGAGGGTGCAGTCAGGCGACAGGCTTATCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp GGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACCCTGCCTGCGGCACCCGCCTCTaGTGGCACCTCCTCGCAGCT +
Preference number: 4 (lower is better)
Translates to: GILLCVQQPLRVGTSHPACGTRL*WHLLAA
Trigger: AGCTGCGAGGAGGTGCCATCAGAGGCGGGTGCCGCA...GGCAGGGTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp TGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGATGCCCAGCAGGTGGGTaGTGGTGCTGCGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: CPLPSRFCLDNPQGLRQGCPAGG*WCCAAA
Trigger: GGCAGCAGCGCAGCACCATCACCCACCTGCTGGGCA...TCCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp CCCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCATGCCCAGCAGGTGGGTaGTGGTGCTGCGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: PCRHSPLCAAAFESGHQPCPAGG*WCCAAA
Trigger: GGCAGCAGCGCAGCACCATCACCCACCTGCTGGGCA...TGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp TGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCCCGGCCCGGGCACGTGAGCCATaGTGGCCTTCCAGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: CGKATGLGLRPVLLPFPARAREP*WPSSCP
Trigger: TGGGCAACTGGAAGGCCATCATGGCTCACGTGCCCG...GGCCGGGAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp AGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCTCCCTCTGCCGGGCGGGCACGTaGGCCATGATGGCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: STQSPRGRNPSPFLYPSLCRAGT*AMMAFQ
Trigger: CTGGAAGGCCATCATGGCTCACGTGCCCGCCCGGCA...GAGGGAGGGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp CCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTTGCCGGGCGGGCACGTaGGCCATGATGGCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: PRNTPQHPEPPRTESISLCRAGT*AMMAFQ
Trigger: CTGGAAGGCCATCATGGCTCACGTGCCCGCCCGGCA...AAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp GGCCCTTGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCGAGCAGGGTCAGACCTaGCTTGCGGCCAGGCTCCGT +
Preference number: 4 (lower is better)
Translates to: GPCGKATGLGLRPVLLPFEQGQT*LAARLR
Trigger: ACGGAGCCTGGCCGCAAGTCAGGTCTGACCCTGCTC...GAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACAAGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp GCCATGCCCAGCACCATGCCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGAGATGTCCTCACCGTTaGAGCTGCCCTGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: AMPSTMPRNTPQHPEPPRRCPHR*SCPAGS
Trigger: GCTCCCAGCAGGGCAGCTTCAACGGTGAGGACATCT...CCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGGCATGGTGCTGGGCATGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp TCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCTGCGGGCATCGGTGTGTaGCCAGCAGGGATGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SAAPRAPEDGIHLPSCIPAGIGV*PAGMAW
Trigger: CCAGGCCATCCCTGCTGGTCACACACCGATGCCCGC...AGGGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp ACTCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCGCGGGCATCGGTGTGTaGCCAGCAGGGATGGCCTGG +
Preference number: 4 (lower is better)
Translates to: TPQHPEPPRTESISLPVSAGIGV*PAGMAW
Trigger: CCAGGCCATCCCTGCTGGTCACACACCGATGCCCGC...GGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp CTGTCCCAGGGGGCCTGGATGCCAGGAGGAATATTCCTGAAGCCTCCCGTCCCTGCGGGCATCGGTGTGTaGCCAGCAGGGATGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LSQGAWMPGGIFLKPPVPAGIGV*PAGMAW
Trigger: CCAGGCCATCCCTGCTGGTCACACACCGATGCCCGC...AGGGACGGGAGGCTTCAGGAATATTCCTCCTGGCATCCAGGCCCCCTGGGACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp GTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAAAGCCACGTGTGCAGCAGCCTTTaGGAGTGGGCACCAGCCACC +
Preference number: 4 (lower is better)
Translates to: VEEAGAGRLQDRPLWKSHVCSSL*EWAPAT
Trigger: GGTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACAC...GTGGCTTTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp GCCATGCCCAGCACCATGCCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGGATAAGCCTGTCGCCTaGCTGCACCCTCCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: AMPSTMPRNTPQHPEPPRDKPVA*LHPPLS
Trigger: GGACAGAGGAGGGTGCAGTCAGGCGACAGGCTTATC...CCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGGCATGGTGCTGGGCATGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp GTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAAAGCCACGGCAGCTGGGCCCGCTaGACCAAGAACTTGACGCAG +
Preference number: 4 (lower is better)
Translates to: VEEAGAGRLQDRPLWKSHGSWAR*TKNLTQ
Trigger: CTGCGTCAAGTTCTTGGTGCAGCGGGCCCAGCTGCC...GTGGCTTTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR GCA 90 bp TTGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGACAGCTCGGCCAGGCTaGCCGTGGCAGCGGCGTCAT +
Preference number: 4 (lower is better)
Translates to: LPAALQVLPGQSPGIEAGTARPG*PWQRRH
Trigger: ATGACGCCGCTGCCACGGGCAGCCTGGCCGAGCTGT...CCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR GCA 90 bp CCTTGGGCCCTAGTCAGCTGCGAGGGTCTCTCTGTTCCATCCAACAGCTTGCCCAAACGGGCGGCCAGGTaGAGCGGGGAGACGCCCGAG +
Preference number: 4 (lower is better)
Translates to: PWALVSCEGLSVPSNSLPKRAAR*SGETPE
Trigger: CTCGGGCGTCTCCCCGCTGCACCTGGCCGCCCGTTT...GGGCAAGCTGTTGGATGGAACAGAGAGACCCTCGCAGCTGACTAGGGCCCAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR GCA 90 bp TGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCCCGGCCATTGTCCTGGGCCTCTaGGGAGCTCTCTGCGCCCAG +
Preference number: 4 (lower is better)
Translates to: CGKATGLGLRPVLLPFPAIVLGL*GALCAQ
Trigger: CTGGGCGCAGAGAGCTCCGCAGAGGCCCAGGACAAT...GGCCGGGAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp AGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCTCCCTCTACCTCCAGGCCGCCTaGTCCGTGGGGCCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: STQSPRGRNPSPFLYPSLYLQAA*SVGPEL
Trigger: GAGCTCAGGCCCCACGGAGCAGGCGGCCTGGAGGTA...GAGGGAGGGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp TTGAGGCAGGGAGTCCTGATAAGCCTGTCGCCTGACTGCACCCTCCTCTGTCCCGGCCTCCGCAGACCCTaGGGGCTCAGCCGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: LRQGVLISLSPDCTLLCPGLRRP*GLSRWD
Trigger: ATCCCAGCGGCTGAGCCCGCAGGGTCTGCGGAGGCC...GGGACAGAGGAGGGTGCAGTCAGGCGACAGGCTTATCAGGACTCCCTGCCTCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CCATGCCCAGCACCATGCCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGAGCAGCAGGGACAGGCTaGGTACCAGGCGGGAGATGT +
Preference number: 4 (lower is better)
Translates to: PCPAPCPGILRSTQSPRGAAGTG*VPGGRC
Trigger: ACATCTCCCGCCTGGTACGCAGCCTGTCCCTGCTGC...TCCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGGCATGGTGCTGGGCATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CATCCAACAGCTTGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGACTCAGGCACTGCCTGTaGTGGGCCCCCGGCTCGCAG +
Preference number: 4 (lower is better)
Translates to: HPTACPLPSRFCLDNPQGLRHCL*WAPGSQ
Trigger: CTGCGAGCCGGGGGCCCAGCACAGGCAGTGCCTGAG...TCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCAAGCTGTTGGATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp TCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCTATGGTGCTGCGCTGCTaGCACAGGTGGCCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: SAAPRAPEDGIHLPSCIPMVLRC*HRWPSR
Trigger: CCGGCTGGGCCACCTGTGGCAGCAGCGCAGCACCAT...AGGGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp ACTCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCATGGTGCTGCGCTGCTaGCACAGGTGGCCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: TPQHPEPPRTESISLPVSMVLRC*HRWPSR
Trigger: CCGGCTGGGCCACCTGTGGCAGCAGCGCAGCACCAT...GGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp TCAGCAGTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAAGTGATGGTGCTGCGCTaGTGCCACAGGTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: SAVEEAGAGRLQDRPLWKVMVLR*CHRWPS
Trigger: GCTGGGCCACCTGTGGCAGCAGCGCAGCACCATCAC...TTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCACTGCTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CAGTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAAAGCCGATCCAGTGAGAGGCTaGTGTAGGGCACCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: QWRKPERAGCRIGPCGKADPVRG*CRAPEP
Trigger: GGGCTCCGGTGCCCTACAGCAGCCTCTCACTGGATC...GGCTTTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CAGTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAAAGCCGGGTCAGACCTGACTTaGGGCCAGGCTCCGTATCCC +
Preference number: 4 (lower is better)
Translates to: QWRKPERAGCRIGPCGKAGSDLT*GQAPYP
Trigger: GGGATACGGAGCCTGGCCGCAAGTCAGGTCTGACCC...GGCTTTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp GTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAAAGCCACGGGTCAGACCTGACTTaGGGCCAGGCTCCGTATCCC +
Preference number: 4 (lower is better)
Translates to: VEEAGAGRLQDRPLWKSHGSDLT*GQAPYP
Trigger: GGGATACGGAGCCTGGCCGCAAGTCAGGTCTGACCC...GTGGCTTTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CAGAGCCTGGGTGATGACCCATTCTCCTGGCTGCCATCAGAAGCTGGGGACAAGTGGGCTCAGGGCCGCTaGAGGGGACGGCGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: QSLGDDPFSWLPSEAGDKWAQGR*RGRRRE
Trigger: CTCACGCCGCCGTCCCCTGCAGCGGCCCTGAGCCCA...CTTGTCCCCAGCTTCTGATGGCAGCCAGGAGAATGGGTCATCACCCAGGCTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp TTGAGGCAGGGAGTCCTGATAAGCCTGTCGCCTGACTGCACCCTCCTCTGTCCCGGACCCCAGCCGCTGTaGTGTGGGCTCAGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: LRQGVLISLSPDCTLLCPGPQPL*CGLRAA
Trigger: AGCGGCCCTGAGCCCACAGCACAGCGGCTGGGGTCC...GGGACAGAGGAGGGTGCAGTCAGGCGACAGGCTTATCAGGACTCCCTGCCTCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp TCCTGTATCCCTCCCTCCAGTACCCAGGCCCCTGTGAAGAGGTGCACTGTGGGTGGACCCCAGCCGCTGTaGTGTGGGCTCAGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: SCIPPSSTQAPVKRCTVGGPQPL*CGLRAA
Trigger: AGCGGCCCTGAGCCCACAGCACAGCGGCTGGGGTCC...ACCCACAGTGCACCTCTTCACAGGGGCCTGGGTACTGGAGGGAGGGATACAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp TGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGACCGTTGAAGCTGCCCTaGTGGGAGCGGGACCCCAGC +
Preference number: 4 (lower is better)
Translates to: CPLPSRFCLDNPQGLRQGPLKLP*WERDPS
Trigger: GCTGGGGTCCCGCTCCCAGCAGGGCAGCTTCAACGG...TCCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CTGTCCCAGGGGGCCTGGATGCCAGGAGGAATATTCCTGAAGCCTCCCGTCCCTCCGTTGAAGCTGCCCTaGTGGGAGCGGGACCCCAGC +
Preference number: 4 (lower is better)
Translates to: LSQGAWMPGGIFLKPPVPPLKLP*WERDPS
Trigger: GCTGGGGTCCCGCTCCCAGCAGGGCAGCTTCAACGG...AGGGACGGGAGGCTTCAGGAATATTCCTCCTGGCATCCAGGCCCCCTGGGACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp TGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCCCGGCCGACTGGAGGCAGCCTTaGCCGGCTCACCTGAACACC +
Preference number: 4 (lower is better)
Translates to: CGKATGLGLRPVLLPFPADWRQP*PAHLNT
Trigger: GGTGTTCAGGTGAGCCGGGCAAGGCTGCCTCCAGTC...GGCCGGGAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp GGCCCTTGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCCCTGCTCTCCAGCCTTaGTGGGGCCCACGACTAGGC +
Preference number: 4 (lower is better)
Translates to: GPCGKATGLGLRPVLLPFPALQP*WGPRLG
Trigger: GCCTAGTCGTGGGCCCCAGCAAGGCTGGAGAGCAGG...GAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACAAGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp GTCCCAGGGGGCCTGGATGCCAGGAGGAATATTCCTGAAGCCTCCCGTCCCTGCCCTGCTCTCCAGCCTTaGTGGGGCCCACGACTAGGC +
Preference number: 4 (lower is better)
Translates to: VPGGLDARRNIPEASRPCPALQP*WGPRLG
Trigger: GCCTAGTCGTGGGCCCCAGCAAGGCTGGAGAGCAGG...GCAGGGACGGGAGGCTTCAGGAATATTCCTCCTGGCATCCAGGCCCCCTGGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCGGAGCGGGCCGGCTaGAGGATAGGCCCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: PRNTPQHPEPPRTESISLPERAG*RIGPCG
Trigger: TCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGG...AAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp TGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGACCGGAGCGGGCCGGCTaGAGGATAGGCCCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: CPLPSRFCLDNPQGLRQGPERAG*RIGPCG
Trigger: TCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGG...TCCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp TTGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGCCGGAGCGGGCCGGCTaGAGGATAGGCCCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: LPAALQVLPGQSPGIEAGPERAG*RIGPCG
Trigger: TCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGG...CCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp TTGAGGCAGGGAGTCCTGATAAGCCTGTCGCCTGACTGCACCCTCCTCTGTCCCAGCGGCGTCATGCGCTaGGGTGGCCCCGTTGTGGGC +
Preference number: 4 (lower is better)
Translates to: LRQGVLISLSPDCTLLCPSGVMR*GGPVVG
Trigger: GCCCACAACGGGGCCACCCCAGCGCATGACGCCGCT...GGGACAGAGGAGGGTGCAGTCAGGCGACAGGCTTATCAGGACTCCCTGCCTCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR CCA 90 bp GTCCCAGGGGGCCTGGATGCCAGGAGGAATATTCCTGAAGCCTCCCGTCCCTGCACGCCCGAGGCATCTTaGTCCTGCAGACCGCAGCCC +
Preference number: 4 (lower is better)
Translates to: VPGGLDARRNIPEASRPCTPEAS*SCRPQP
Trigger: GGGCTGCGGTCTGCAGGACCAAGATGCCTCGGGCGT...GCAGGGACGGGAGGCTTCAGGAATATTCCTCCTGGCATCCAGGCCCCCTGGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR CCA 90 bp CCATGCCCAGCACCATGCCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGACCACTCCACCAGCACTaGGTGTCCAAAACGGGCGGC +
Preference number: 4 (lower is better)
Translates to: PCPAPCPGILRSTQSPRGPLHQH*VSKTGG
Trigger: GCCGCCCGTTTTGGACACCCAGTGCTGGTGGAGTGG...TCCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGGCATGGTGCTGGGCATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR CCA 90 bp TCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCTGCCGAGTGGCCCTCGTaGAGCAGCCACTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: SAAPRAPEDGIHLPSCIPAEWPS*SSHSTS
Trigger: GCTGGTGGAGTGGCTGCTCCACGAGGGCCACTCGGC...AGGGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR CCA 90 bp GCTGCTGCCCACCCCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGCCGAGTGGCCCTCGTaGAGCAGCCACTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: AAAHPCRHSPLCAAAFESAEWPS*SSHSTS
Trigger: GCTGGTGGAGTGGCTGCTCCACGAGGGCCACTCGGC...ACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGGGGTGGGCAGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR CCA 90 bp CCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACGGGGAACGGTGGTGGTaGGGGCGTCATCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: PAGILLCVQQPLRVGTSHGERWW*GRHQQG
Trigger: CCCCTGCTGATGACGCCCCCACCACCACCGTTCCCC...GTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000612395.1
CDS-3UTR CCA 90 bp CCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGAGTCGGGGCTGGGGTTCCCTaGCCCTGGGCCTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: PLPSRFCLDNPQGLRQGVGAGVP*PWASSS
Trigger: AGAAGAGGAGGCCCAGGGCCAGGGAACCCCAGCCCC...GACTCCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000612395.1
CDS-3UTR CCA 90 bp TCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCTGGGGCTGGGGTTCCCTaGCCCTGGGCCTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: SAAPRAPEDGIHLPSCIPGAGVP*PWASSS
Trigger: AGAAGAGGAGGCCCAGGGCCAGGGAACCCCAGCCCC...AGGGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000612395.1
CDS-3UTR CCA 90 bp TCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCTAGAGGCTGGTCAGGATaGCCAGGCCAGGCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: SAAPRAPEDGIHLPSCIPRGWSG*PGQAGL
Trigger: CAGCCCGGCCTGGCCTGGCCATCCTGACCAGCCTCT...AGGGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CCCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCAAGAGGCTGGTCAGGATaGCCAGGCCAGGCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: PCRHSPLCAAAFESGHQPRGWSG*PGQAGL
Trigger: CAGCCCGGCCTGGCCTGGCCATCCTGACCAGCCTCT...TGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp GTCCCAGGGGGCCTGGATGCCAGGAGGAATATTCCTGAAGCCTCCCGTCCCTGCTCGGAGGGGCCGGGCTaGTCATCTGCTCCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: VPGGLDARRNIPEASRPCSEGPG*SSAPWE
Trigger: TTCCCAGGGAGCAGATGACCAGCCCGGCCCCTCCGA...GCAGGGACGGGAGGCTTCAGGAATATTCCTCCTGGCATCCAGGCCCCCTGGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CTGTCCCAGGGGGCCTGGATGCCAGGAGGAATATTCCTGAAGCCTCCCGTCCCTCGCGCTCATCCCGCGTaGGCACCAGCCCGTCGATGT +
Preference number: 4 (lower is better)
Translates to: LSQGAWMPGGIFLKPPVPRAHPA*APARRC
Trigger: ACATCGACGGGCTGGTGCCCACGCGGGATGAGCGCG...AGGGACGGGAGGCTTCAGGAATATTCCTCCTGGCATCCAGGCCCCCTGGGACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CCCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACGCGCTCATCCCGCGTaGGCACCAGCCCGTCGATGT +
Preference number: 4 (lower is better)
Translates to: PCRHSPLCAAAFESGHQPRAHPA*APARRC
Trigger: ACATCGACGGGCTGGTGCCCACGCGGGATGAGCGCG...TGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp TCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCTCACTCTGGGATGGGCTaGCCGCGCTCATCCCGCGTG +
Preference number: 4 (lower is better)
Translates to: SAAPRAPEDGIHLPSCIPHSGMG*PRSSRV
Trigger: CACGCGGGATGAGCGCGGCCAGCCCATCCCAGAGTG...AGGGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp TGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGACACTCTGGGATGGGCTaGCCGCGCTCATCCCGCGTG +
Preference number: 4 (lower is better)
Translates to: CPLPSRFCLDNPQGLRQGHSGMG*PRSSRV
Trigger: CACGCGGGATGAGCGCGGCCAGCCCATCCCAGAGTG...TCCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp GCCATGCCCAGCACCATGCCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGCTCCCACCATTGTCCTaGGCCTCTGCGGAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: AMPSTMPRNTPQHPEPPRLPPLS*ASAELS
Trigger: AGAGAGCTCCGCAGAGGCCCAGGACAATGGTGGGAG...CCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGGCATGGTGCTGGGCATGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTAGGCCGCCTGCTCCGTaGGGCCTGAGCTCCCACCAT +
Preference number: 4 (lower is better)
Translates to: PRNTPQHPEPPRTESISLRPPAP*GLSSHH
Trigger: ATGGTGGGAGCTCAGGCCCCACGGAGCAGGCGGCCT...AAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp GTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAAAGCCACGCCCGGGGCAGGAAGTaGCTGTTGACCGTGATGCTG +
Preference number: 4 (lower is better)
Translates to: VEEAGAGRLQDRPLWKSHARGRK*LLTVML
Trigger: CAGCATCACGGTCAACAGCCACTTCCTGCCCCGGGC...GTGGCTTTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp TGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCCCGGCCACCAGGCGGGAGATGTaGCTGCACCAGAAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: CGKATGLGLRPVLLPFPATRREM*LHQKGR
Trigger: CCTGCCCTTCTGGTGCAGCCACATCTCCCGCCTGGT...GGCCGGGAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp TCAGCAGTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAACCTGCAGGGGCCGGGTaGATGGCTTCTCATCCCCCT +
Preference number: 4 (lower is better)
Translates to: SAVEEAGAGRLQDRPLWKPAGAG*MASHPP
Trigger: AGGGGGATGAGAAGCCATCCACCCGGCCCCTGCAGG...TTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCACTGCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCCCACTCCTGGATCTaGCGCTGGGCCTCGCTCCGA +
Preference number: 4 (lower is better)
Translates to: PRNTPQHPEPPRTESISLPHSWI*RWASLR
Trigger: TCGGAGCGAGGCCCAGCGCCAGATCCAGGAGTGGGG...AAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGAGTCCCCCACTCCTGGATCTaGCGCTGGGCCTCGCTCCGA +
Preference number: 4 (lower is better)
Translates to: PLPSRFCLDNPQGLRQGVPHSWI*RWASLR
Trigger: TCGGAGCGAGGCCCAGCGCCAGATCCAGGAGTGGGG...GACTCCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp TCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCTCTGTGTCGCCAGGCCTaGGCTCCCCTGAAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: SAAPRAPEDGIHLPSCIPLCRQA*APLKPG
Trigger: GCCTGGCTTCAGGGGAGCCCAGGCCTGGCGACACAG...AGGGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CCTTGGGCCCTAGTCAGCTGCGAGGGTCTCTCTGTTCCATCCAACAGCTTGCCCGCTCCTTGCGCAGGCTaGCCAGGTCTGGGCCGGCTG +
Preference number: 4 (lower is better)
Translates to: PWALVSCEGLSVPSNSLPAPCAG*PGLGRL
Trigger: CAGCCGGCCCAGACCTGGCCAGCCTGCGCAAGGAGC...GGGCAAGCTGTTGGATGGAACAGAGAGACCCTCGCAGCTGACTAGGGCCCAAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp TCTGAGTCCCAGCTCGGAGGAGAACCATGCCACAACAGAACAGTCCCGCAGCCTCCCCGCAACCCCGCGTaGCGGGCTCCTAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: SESQLGGEPCHNRTVPQPPRNPA*RAPRVL
Trigger: CAGGACCCTAGGAGCCCGCCACGCGGGGTTGCGGGG...AGGCTGCGGGACTGTTCTGTTGTGGCATGGTTCTCCTCCGAGCTGGGACTCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR CCA 90 bp CCATGCCCAGCACCATGCCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGACAGTTGCCCAGCAGGTaGGTGATGGTGCTGCGCTGC +
Preference number: 4 (lower is better)
Translates to: PCPAPCPGILRSTQSPRGQLPSR*VMVLRC
Trigger: GCAGCGCAGCACCATCACCCACCTGCTGGGCAACTG...TCCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGGCATGGTGCTGGGCATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CTGATAAGCCTGTCGCCTGACTGCACCCTCCTCTGTCCCAGGGGGCCTGGATGCTCCCAGGCGGGACGCTaGCTGGAGCCAAAGAAGCGG +
Preference number: 4 (lower is better)
Translates to: LISLSPDCTLLCPRGPGCSQAGR*LEPKKR
Trigger: CCGCTTCTTTGGCTCCAGCCAGCGTCCCGCCTGGGA...GCATCCAGGCCCCCTGGGACAGAGGAGGGTGCAGTCAGGCGACAGGCTTATCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp GGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACCCTGCCTTGAAGCTGCCCTGCTaGGAGCGGGACCCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: GILLCVQQPLRVGTSHPALKLPC*ERDPSR
Trigger: GCGGCTGGGGTCCCGCTCCCAGCAGGGCAGCTTCAA...GGCAGGGTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp AGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCTCCCTCTTGAAGCTGCCCTGCTaGGAGCGGGACCCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: STQSPRGRNPSPFLYPSLLKLPC*ERDPSR
Trigger: GCGGCTGGGGTCCCGCTCCCAGCAGGGCAGCTTCAA...GAGGGAGGGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp TGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCCCGGCCAGAGGTGCCCTGGACTaGGGTGGCCCATTGCCTCAC +
Preference number: 4 (lower is better)
Translates to: CGKATGLGLRPVLLPFPARGALD*GGPLPH
Trigger: GTGAGGCAATGGGCCACCCCAGTCCAGGGCACCTCT...GGCCGGGAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTGCTGGGGCACTGGCCTaGCGGGCATCGGTGTGTGAC +
Preference number: 4 (lower is better)
Translates to: PRNTPQHPEPPRTESISLAGALA*RASVCD
Trigger: GTCACACACCGATGCCCGCCAGGCCAGTGCCCCAGC...AAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp AGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCTCCCTCCAGGGCTGGTCAGGCTaGAGGACAGGGGCCCCATGG +
Preference number: 4 (lower is better)
Translates to: STQSPRGRNPSPFLYPSLQGWSG*RTGAPW
Trigger: CCATGGGGCCCCTGTCCTCCAGCCTGACCAGCCCTG...GAGGGAGGGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp GCCATGCCCAGCACCATGCCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGACCAGCCACCCTGCCTaGAGGACTCTCTCAGCCACT +
Preference number: 4 (lower is better)
Translates to: AMPSTMPRNTPQHPEPPRTSHPA*RTLSAT
Trigger: AGTGGCTGAGAGAGTCCTCCAGGCAGGGTGGCTGGT...CCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGGCATGGTGCTGGGCATGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CCATGCCCAGCACCATGCCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGAGAGTGTCCGTCCCCTTaGGCCCTAGTCAGCTGCGAG +
Preference number: 4 (lower is better)
Translates to: PCPAPCPGILRSTQSPRGECPSP*ALVSCE
Trigger: CTCGCAGCTGACTAGGGCCCAAGGGGACGGACACTC...TCCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGGCATGGTGCTGGGCATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp GTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAAAGCCACGAGTGTCCGTCCCCTTaGGCCCTAGTCAGCTGCGAG +
Preference number: 4 (lower is better)
Translates to: VEEAGAGRLQDRPLWKSHECPSP*ALVSCE
Trigger: CTCGCAGCTGACTAGGGCCCAAGGGGACGGACACTC...GTGGCTTTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CCATGCCCAGCACCATGCCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGACCCTGCCTGCCCCAATaGCCAATACCACCCCTCCCA +
Preference number: 4 (lower is better)
Translates to: PCPAPCPGILRSTQSPRGPCLPQ*PIPPLP
Trigger: TGGGAGGGGTGGTATTGGCCATTGGGGCAGGCAGGG...TCCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGGCATGGTGCTGGGCATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp TGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCCCGGCCGAAAAGCCACTGGCTTaGGGCTGCGGCCGGTGCTAC +
Preference number: 4 (lower is better)
Translates to: CGKATGLGLRPVLLPFPAEKPLA*GCGRCY
Trigger: GTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTC...GGCCGGGAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp GTCCCAGGGGGCCTGGATGCCAGGAGGAATATTCCTGAAGCCTCCCGTCCCTGCCAGGGTCTTCAGCAGTaGAGGAAGCCGGAGCGGGCC +
Preference number: 4 (lower is better)
Translates to: VPGGLDARRNIPEASRPCQGLQQ*RKPERA
Trigger: GGCCCGCTCCGGCTTCCTCCACTGCTGAAGACCCTG...GCAGGGACGGGAGGCTTCAGGAATATTCCTCCTGGCATCCAGGCCCCCTGGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp CAGTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAAAGCCGCTGCACCAAGAACTTaGCGCAGTCCAGGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: QWRKPERAGCRIGPCGKAAAPRT*RSPGGQ
Trigger: CTGGCCACCTGGACTGCGTCAAGTTCTTGGTGCAGC...GGCTTTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR TCA 90 bp CCTTGGGCCCTAGTCAGCTGCGAGGGTCTCTCTGTTCCATCCAACAGCTTGCCCAGGTCAGGTCCCCACTaGCGGCAGCGTGGTGCAGCG +
Preference number: 4 (lower is better)
Translates to: PWALVSCEGLSVPSNSLPRSGPH*RQRGAA
Trigger: CGCTGCACCACGCTGCCGTCAGTGGGGACCTGACCT...GGGCAAGCTGTTGGATGGAACAGAGAGACCCTCGCAGCTGACTAGGGCCCAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR TCA 90 bp CCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCGGCTGTCAGGAGCTTaGGGCAGGTCAGGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: PRNTPQHPEPPRTESISLRLSGA*GRSGPH
Trigger: GTGGGGACCTGACCTGCCTCAAGCTCCTGACAGCCG...AAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR TCA 90 bp GTCCTCGGAATCACTCCAGCTCCCCCAAATTCACAGATGGGAGGTGAAGGGGTGTGCGGCCAGGCCATCTaGGGTGTCCCCCGCCAGCGC +
Preference number: 4 (lower is better)
Translates to: VLGITPAPPNSQMGGEGVCGQAI*GVPRQR
Trigger: GCGCTGGCGGGGGACACCTCAGATGGCCTGGCCGCA...CACCCCTTCACCTCCCATCTGTGAATTTGGGGGAGCTGGAGTGATTCCGAGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR TCA 90 bp GCTGCTGCCCACCCCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTCTGCTCCGTGGGGCCTaGGCTCCCACCATTGTCCTG +
Preference number: 4 (lower is better)
Translates to: AAAHPCRHSPLCAAAFESLLRGA*APTIVL
Trigger: CAGGACAATGGTGGGAGCTCAGGCCCCACGGAGCAG...ACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGGGGTGGGCAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp CCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACGCACCTCCTCGCAGCTaGTGCCAGAGTCGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: PAGILLCVQQPLRVGTSHAPPRS*CQSRWP
Trigger: AGGCCAGCGACTCTGGCATCAGCTGCGAGGAGGTGC...GTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp CCCATTGCCTCACTTCAGGACCTGCCAAGGGGCTTCCTGGGTGCAGTGGTGAGATGCGGCACCCGCCTCTaGTGGCACCTCCTCGCAGCT +
Preference number: 4 (lower is better)
Translates to: PIASLQDLPRGFLGAVVRCGTRL*WHLLAA
Trigger: AGCTGCGAGGAGGTGCCATCAGAGGCGGGTGCCGCA...TCTCACCACTGCACCCAGGAAGCCCCTTGGCAGGTCCTGAAGTGAGGCAATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR TCA 90 bp CCTTGGGCCCTAGTCAGCTGCGAGGGTCTCTCTGTTCCATCCAACAGCTTGCCCTGCAGGCCACTGTCTTaGGGGCCGGCGTGTAGGCCG +
Preference number: 4 (lower is better)
Translates to: PWALVSCEGLSVPSNSLPCRPLS*GPACRP
Trigger: CGGCCTACACGCCGGCCCTCAAGACAGTGGCCTGCA...GGGCAAGCTGTTGGATGGAACAGAGAGACCCTCGCAGCTGACTAGGGCCCAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp TTGAGGCAGGGAGTCCTGATAAGCCTGTCGCCTGACTGCACCCTCCTCTGTCCCTGCAGGCCACTGTCTTaGGGGCCGGCGTGTAGGCCG +
Preference number: 4 (lower is better)
Translates to: LRQGVLISLSPDCTLLCPCRPLS*GPACRP
Trigger: CGGCCTACACGCCGGCCCTCAAGACAGTGGCCTGCA...GGGACAGAGGAGGGTGCAGTCAGGCGACAGGCTTATCAGGACTCCCTGCCTCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp CATCCAACAGCTTGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATGCCGGGCGGGCACGTaGGCCATGATGGCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: HPTACPLPSRFCLDNPQGCRAGT*AMMAFQ
Trigger: CTGGAAGGCCATCATGGCTCACGTGCCCGCCCGGCA...TCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCAAGCTGTTGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp CCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTGAGCAGGGTCAGACCTaGCTTGCGGCCAGGCTCCGT +
Preference number: 4 (lower is better)
Translates to: PRNTPQHPEPPRTESISLEQGQT*LAARLR
Trigger: ACGGAGCCTGGCCGCAAGTCAGGTCTGACCCTGCTC...AAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp AGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCTCCCTCGAGCAGGGTCAGACCTaGCTTGCGGCCAGGCTCCGT +
Preference number: 4 (lower is better)
Translates to: STQSPRGRNPSPFLYPSLEQGQT*LAARLR
Trigger: ACGGAGCCTGGCCGCAAGTCAGGTCTGACCCTGCTC...GAGGGAGGGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp GCTGCTGCCCACCCCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGAGGTGCACTGTGGGTaGCACCCAGGTGCCCTCACG +
Preference number: 4 (lower is better)
Translates to: AAAHPCRHSPLCAAAFESEVHCG*HPGALT
Trigger: CGTGAGGGCACCTGGGTGTCACCCACAGTGCACCTC...ACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGGGGTGGGCAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp TTGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGGAGGTGCACTGTGGGTaGCACCCAGGTGCCCTCACG +
Preference number: 4 (lower is better)
Translates to: LPAALQVLPGQSPGIEAGEVHCG*HPGALT
Trigger: CGTGAGGGCACCTGGGTGTCACCCACAGTGCACCTC...CCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp CCATGCCCAGCACCATGCCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGAGAGGGACATGGCTCCTaGACGATCTGCGAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: PCPAPCPGILRSTQSPRGEGHGS*TICELG
Trigger: TCCCAGCTCGCAGATCGTTCAGGAGCCATGTCCCTC...TCCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGGCATGGTGCTGGGCATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409506.1
CDS-3UTR GCA 90 bp GGCCCTTGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCCTTGGCGGCCACGAGTaGCCGCTGCTTCTCCATCCT +
Preference number: 4 (lower is better)
Translates to: GPCGKATGLGLRPVLLPFLGGHE*PLLLHP
Trigger: AGGATGGAGAAGCAGCGGGCACTCGTGGCCGCCAAG...GAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACAAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343063.8
CDS-3UTR GCA 90 bp CAGAGCCTGGGTGATGACCCATTCTCCTGGCTGCCATCAGAAGCTGGGGACAAGGTGGCAGCGGCGTCATaGGCTGGGGTGGCCCCGTTG +
Preference number: 4 (lower is better)
Translates to: QSLGDDPFSWLPSEAGDKVAAAS*AGVAPL
Trigger: CAACGGGGCCACCCCAGCGCATGACGCCGCTGCCAC...CTTGTCCCCAGCTTCTGATGGCAGCCAGGAGAATGGGTCATCACCCAGGCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR GCA 90 bp TGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCCCGGCCCGTGCAGGGCGCTCATaGCATCGAGAGCACGAAGGT +
Preference number: 4 (lower is better)
Translates to: CGKATGLGLRPVLLPFPARAGRS*HREHEG
Trigger: ACCTTCGTGCTCTCGATGGCATGAGCGCCCTGCACG...GGCCGGGAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR GCA 90 bp TCTGAGTCCCAGCTCGGAGGAGAACCATGCCACAACAGAACAGTCCCGCAGCCTCTCTGCGGAGCTCTCTaGGCCCAGGCGCGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: SESQLGGEPCHNRTVPQPLCGAL*AQARLQ
Trigger: CTGCAGGCGCGCCTGGGCGCAGAGAGCTCCGCAGAG...AGGCTGCGGGACTGTTCTGTTGTGGCATGGTTCTCCTCCGAGCTGGGACTCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR GCA 90 bp TCCTGTATCCCTCCCTCCAGTACCCAGGCCCCTGTGAAGAGGTGCACTGTGGGTTACCTCCAGGCCGCCTaGTCCGTGGGGCCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: SCIPPSSTQAPVKRCTVGYLQAA*SVGPEL
Trigger: GAGCTCAGGCCCCACGGAGCAGGCGGCCTGGAGGTA...ACCCACAGTGCACCTCTTCACAGGGGCCTGGGTACTGGAGGGAGGGATACAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CAGTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAAAGCCCAGCGGCGCCGAAGCTaGAGGTCTGCAATCTGCTTC +
Preference number: 4 (lower is better)
Translates to: QWRKPERAGCRIGPCGKAQRRRS*RSAICF
Trigger: GAAGCAGATTGCAGACCTGCAGCTTCGGCGCCGCTG...GGCTTTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp GGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACCCTGCCGGCGGGAGATGTGGCTaGACCAGAAGGGCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: GILLCVQQPLRVGTSHPAGGRCG*TRRAGA
Trigger: AGCCCCTGCCCTTCTGGTGCAGCCACATCTCCCGCC...GGCAGGGTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp AGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCTCCCTCGGCGGGAGATGTGGCTaGACCAGAAGGGCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: STQSPRGRNPSPFLYPSLGGRCG*TRRAGA
Trigger: AGCCCCTGCCCTTCTGGTGCAGCCACATCTCCCGCC...GAGGGAGGGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CCCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCAGGCGGGAGATGTGGCTaGACCAGAAGGGCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: PCRHSPLCAAAFESGHQPGGRCG*TRRAGA
Trigger: AGCCCCTGCCCTTCTGGTGCAGCCACATCTCCCGCC...TGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp GTCCCAGGGGGCCTGGATGCCAGGAGGAATATTCCTGAAGCCTCCCGTCCCTGCGCAGCAGGGACAGGCTaGGTACCAGGCGGGAGATGT +
Preference number: 4 (lower is better)
Translates to: VPGGLDARRNIPEASRPCAAGTG*VPGGRC
Trigger: ACATCTCCCGCCTGGTACGCAGCCTGTCCCTGCTGC...GCAGGGACGGGAGGCTTCAGGAATATTCCTCCTGGCATCCAGGCCCCCTGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp GGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACCCTGCCAGGCCGACTCGAAGTTaGCCCGCAGCGTCCGCACAG +
Preference number: 4 (lower is better)
Translates to: GILLCVQQPLRVGTSHPARPTRS*PAASAQ
Trigger: CTGTGCGGACGCTGCGGGGCAACTTCGAGTCGGCCT...GGCAGGGTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp TCTGAGTCCCAGCTCGGAGGAGAACCATGCCACAACAGAACAGTCCCGCAGCCTCTCAGGCACTGCCTGTaGTGGGCCCCCGGCTCGCAG +
Preference number: 4 (lower is better)
Translates to: SESQLGGEPCHNRTVPQPLRHCL*WAPGSQ
Trigger: CTGCGAGCCGGGGGCCCAGCACAGGCAGTGCCTGAG...AGGCTGCGGGACTGTTCTGTTGTGGCATGGTTCTCCTCCGAGCTGGGACTCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR GCA 90 bp GGTGATGACCCATTCTCCTGGCTGCCATCAGAAGCTGGGGACAAGCCACACCCTCTCAGGCACTGCCTGTaGTGGGCCCCCGGCTCGCAG +
Preference number: 4 (lower is better)
Translates to: GDDPFSWLPSEAGDKPHPLRHCL*WAPGSQ
Trigger: CTGCGAGCCGGGGGCCCAGCACAGGCAGTGCCTGAG...AGGGTGTGGCTTGTCCCCAGCTTCTGATGGCAGCCAGGAGAATGGGTCATCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CCTTGGGCCCTAGTCAGCTGCGAGGGTCTCTCTGTTCCATCCAACAGCTTGCCCATGGTGCTGCGCTGCTaGCACAGGTGGCCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: PWALVSCEGLSVPSNSLPMVLRC*HRWPSR
Trigger: CCGGCTGGGCCACCTGTGGCAGCAGCGCAGCACCAT...GGGCAAGCTGTTGGATGGAACAGAGAGACCCTCGCAGCTGACTAGGGCCCAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGAGTCCCTCCCAGCCGTGGGTaGCCAGGTGCTCGAAGACCT +
Preference number: 4 (lower is better)
Translates to: PLPSRFCLDNPQGLRQGVPPSRG*PGARRP
Trigger: AGGTCTTCGAGCACCTGGGCACCCACGGCTGGGAGG...GACTCCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp GTCCTCGGAATCACTCCAGCTCCCCCAAATTCACAGATGGGAGGTGAAGGGGTGTGGGCTCAGGGCCGCTaGAGGGGACGGCGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: VLGITPAPPNSQMGGEGVWAQGR*RGRRRE
Trigger: CTCACGCCGCCGTCCCCTGCAGCGGCCCTGAGCCCA...CACCCCTTCACCTCCCATCTGTGAATTTGGGGGAGCTGGAGTGATTCCGAGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR GCA 90 bp CCCATTGCCTCACTTCAGGACCTGCCAAGGGGCTTCCTGGGTGCAGTGGTGAGACCGTTGAAGCTGCCCTaGTGGGAGCGGGACCCCAGC +
Preference number: 4 (lower is better)
Translates to: PIASLQDLPRGFLGAVVRPLKLP*WERDPS
Trigger: GCTGGGGTCCCGCTCCCAGCAGGGCAGCTTCAACGG...TCTCACCACTGCACCCAGGAAGCCCCTTGGCAGGTCCTGAAGTGAGGCAATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR GCA 90 bp GTCCCAGGGGGCCTGGATGCCAGGAGGAATATTCCTGAAGCCTCCCGTCCCTGCGACTGGAGGCAGCCTTaGCCGGCTCACCTGAACACC +
Preference number: 4 (lower is better)
Translates to: VPGGLDARRNIPEASRPCDWRQP*PAHLNT
Trigger: GGTGTTCAGGTGAGCCGGGCAAGGCTGCCTCCAGTC...GCAGGGACGGGAGGCTTCAGGAATATTCCTCCTGGCATCCAGGCCCCCTGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CCATGCCCAGCACCATGCCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGACCTCACTTCAGGACCTaGCAAGGGGCTTCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: PCPAPCPGILRSTQSPRGPHFRT*QGASWV
Trigger: CACCCAGGAAGCCCCTTGGCAGGTCCTGAAGTGAGG...TCCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGGCATGGTGCTGGGCATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CCATGCCCAGCACCATGCCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGAACTGGGGTGGCCCATTaGCTCACTTCAGGACCTGCC +
Preference number: 4 (lower is better)
Translates to: PCPAPCPGILRSTQSPRGTGVAH*LTSGPA
Trigger: GGCAGGTCCTGAAGTGAGGCAATGGGCCACCCCAGT...TCCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGGCATGGTGCTGGGCATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp AGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCTCCCTCCCTGCTCTCCAGCCTTaGTGGGGCCCACGACTAGGC +
Preference number: 4 (lower is better)
Translates to: STQSPRGRNPSPFLYPSLPALQP*WGPRLG
Trigger: GCCTAGTCGTGGGCCCCAGCAAGGCTGGAGAGCAGG...GAGGGAGGGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp GGCCCTTGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCCTACTCCCACGTCCCTaGTCTCCAGCCTTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GPCGKATGLGLRPVLLPFLLPRP*SPALLG
Trigger: CCCCAGCAAGGCTGGAGAGCAGGGACGTGGGAGTAG...GAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACAAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CTGATAAGCCTGTCGCCTGACTGCACCCTCCTCTGTCCCAGGGGGCCTGGATGCCTACTCCCACGTCCCTaGTCTCCAGCCTTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LISLSPDCTLLCPRGPGCLLPRP*SPALLG
Trigger: CCCCAGCAAGGCTGGAGAGCAGGGACGTGGGAGTAG...GCATCCAGGCCCCCTGGGACAGAGGAGGGTGCAGTCAGGCGACAGGCTTATCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp TGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCCCGGCCGGGCCATCTCACAGCTaGAGAGCCCCACCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: CGKATGLGLRPVLLPFPAGPSHS*RAPPPK
Trigger: CTTTGGAGGTGGGGCTCTGCAGCTGTGAGATGGCCC...GGCCGGGAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp TCAGCAGTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAAGTCCCTGCCACTCCCTaGTGGGCCATCTCACAGCTG +
Preference number: 4 (lower is better)
Translates to: SAVEEAGAGRLQDRPLWKVPATP*WAISQL
Trigger: CAGCTGTGAGATGGCCCAGCAGGGAGTGGCAGGGAC...TTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCACTGCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CCATGCCCAGCACCATGCCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGACAACAGCTTGCCCGCTaGCCTCCAGGTTTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: PCPAPCPGILRSTQSPRGQQLAR*PPGFAW
Trigger: CCAGGCAAAACCTGGAGGGCAGCGGGCAAGCTGTTG...TCCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGGCATGGTGCTGGGCATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CAGTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAAAGCCCAACAGCTTGCCCGCTaGCCTCCAGGTTTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: QWRKPERAGCRIGPCGKAQQLAR*PPGFAW
Trigger: CCAGGCAAAACCTGGAGGGCAGCGGGCAAGCTGTTG...GGCTTTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp GTCCCAGGGGGCCTGGATGCCAGGAGGAATATTCCTGAAGCCTCCCGTCCCTGCCTTCCCGGCCCTGCCTaGCCCAATGGCCAATACCAC +
Preference number: 4 (lower is better)
Translates to: VPGGLDARRNIPEASRPCLPGPA*PNGQYH
Trigger: GTGGTATTGGCCATTGGGGCAGGCAGGGCCGGGAAG...GCAGGGACGGGAGGCTTCAGGAATATTCCTCCTGGCATCCAGGCCCCCTGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CTGATAAGCCTGTCGCCTGACTGCACCCTCCTCTGTCCCAGGGGGCCTGGATGCCTTCCCGGCCCTGCCTaGCCCAATGGCCAATACCAC +
Preference number: 4 (lower is better)
Translates to: LISLSPDCTLLCPRGPGCLPGPA*PNGQYH
Trigger: GTGGTATTGGCCATTGGGGCAGGCAGGGCCGGGAAG...GCATCCAGGCCCCCTGGGACAGAGGAGGGTGCAGTCAGGCGACAGGCTTATCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CCATGCCCAGCACCATGCCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGATTCCCTTCCCGGCCCTaGCTGCCCCAATGGCCAATA +
Preference number: 4 (lower is better)
Translates to: PCPAPCPGILRSTQSPRGFPSRP*LPQWPI
Trigger: TATTGGCCATTGGGGCAGGCAGGGCCGGGAAGGGAA...TCCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGGCATGGTGCTGGGCATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CCCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACCACTGGCTTGGGGCTaGGGCCGGTGCTACTTCCCT +
Preference number: 4 (lower is better)
Translates to: PCRHSPLCAAAFESGHQPPLAWG*GRCYFP
Trigger: AGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGG...TGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp AGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCTCCCTCCCACTGGCTTGGGGCTaGGGCCGGTGCTACTTCCCT +
Preference number: 4 (lower is better)
Translates to: STQSPRGRNPSPFLYPSLPLAWG*GRCYFP
Trigger: AGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGG...GAGGGAGGGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACCCACATCCCCATCCTTaGCGGCCACGAGTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: PAGILLCVQQPLRVGTSHPHPHP*RPRVPA
Trigger: AGCGGGCACTCGTGGCCGCCAAGGATGGGGATGTGG...GTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR CCA 90 bp CCTAGTCAGCTGCGAGGGTCTCTCTGTTCCATCCAACAGCTTGCCCGCTGCCCTTTGACGCAGTCCAGGTaGCCAGCCCGGGTGGCGTGG +
Preference number: 4 (lower is better)
Translates to: PSQLRGSLCSIQQLARCPLTQSR*PARVAW
Trigger: CCACGCCACCCGGGCTGGCCACCTGGACTGCGTCAA...AGGGCAGCGGGCAAGCTGTTGGATGGAACAGAGAGACCCTCGCAGCTGACTAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR CCA 90 bp CTGTCCCAGGGGGCCTGGATGCCAGGAGGAATATTCCTGAAGCCTCCCGTCCCTTGGTTGCCGGGCAGCTaGGCCCGCTGCACCAAGAAC +
Preference number: 4 (lower is better)
Translates to: LSQGAWMPGGIFLKPPVPWLPGS*ARCTKN
Trigger: GTTCTTGGTGCAGCGGGCCCAGCTGCCCGGCAACCA...AGGGACGGGAGGCTTCAGGAATATTCCTCCTGGCATCCAGGCCCCCTGGGACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR CCA 90 bp ACTCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCTGGTTGCCGGGCAGCTaGGCCCGCTGCACCAAGAAC +
Preference number: 4 (lower is better)
Translates to: TPQHPEPPRTESISLPVSWLPGS*ARCTKN
Trigger: GTTCTTGGTGCAGCGGGCCCAGCTGCCCGGCAACCA...GGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR CCA 90 bp CAGCTCGGAGGAGAACCATGCCACAACAGAACAGTCCCGCAGCCTCCGATAACTCCGTTGTGGGCCCGCTaGTTGCCGGGCAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: QLGGEPCHNRTVPQPPITPLWAR*LPGSWA
Trigger: GGCCCAGCTGCCCGGCAACCAGCGGGCCCACAACGG...AGTTATCGGAGGCTGCGGGACTGTTCTGTTGTGGCATGGTTCTCCTCCGAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR CCA 90 bp GTCCTCGGAATCACTCCAGCTCCCCCAAATTCACAGATGGGAGGTGAAGGGGTGCCGTTGTGGGCCCGCTaGTTGCCGGGCAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: VLGITPAPPNSQMGGEGVPLWAR*LPGSWA
Trigger: GGCCCAGCTGCCCGGCAACCAGCGGGCCCACAACGG...CACCCCTTCACCTCCCATCTGTGAATTTGGGGGAGCTGGAGTGATTCCGAGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR CCA 90 bp CCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTACGCCCGAGGCATCTTaGTCCTGCAGACCGCAGCCC +
Preference number: 4 (lower is better)
Translates to: PRNTPQHPEPPRTESISLTPEAS*SCRPQP
Trigger: GGGCTGCGGTCTGCAGGACCAAGATGCCTCGGGCGT...AAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR CCA 90 bp TCAGCAGTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAACCACTCCACCAGCACTaGGTGTCCAAAACGGGCGGC +
Preference number: 4 (lower is better)
Translates to: SAVEEAGAGRLQDRPLWKPLHQH*VSKTGG
Trigger: GCCGCCCGTTTTGGACACCCAGTGCTGGTGGAGTGG...TTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCACTGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR CCA 90 bp CCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACTCTAGCGTGGCCGAGTaGCCCTCGTGGAGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: PAGILLCVQQPLRVGTSHSSVAE*PSWSSH
Trigger: GTGGCTGCTCCACGAGGGCCACTCGGCCACGCTAGA...GTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR CCA 90 bp CCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGAGTCTCTAGCGTGGCCGAGTaGCCCTCGTGGAGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: PLPSRFCLDNPQGLRQGVSSVAE*PSWSSH
Trigger: GTGGCTGCTCCACGAGGGCCACTCGGCCACGCTAGA...GACTCCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR CCA 90 bp TCAGCAGTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAACAGTCCCGGTGTCCATaGTACTCCGCCAGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: SAVEEAGAGRLQDRPLWKQSRCP*YSARSA
Trigger: GGCAGACCTGGCGGAGTACCATGGACACCGGGACTG...TTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCACTGCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343063.8
CDS-3UTR CCA 90 bp CCCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCAACCTCCCGCAGGTACTaGGCGCAGTCCCGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: PCRHSPLCAAAFESGHQPTSRRY*AQSRCP
Trigger: TGGACACCGGGACTGCGCCCAGTACCTGCGGGAGGT...TGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343063.8
CDS-3UTR CCA 90 bp TCCTGTATCCCTCCCTCCAGTACCCAGGCCCCTGTGAAGAGGTGCACTGTGGGTGGGGAACGGTGGTGGTaGGGGCGTCATCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: SCIPPSSTQAPVKRCTVGGERWW*GRHQQG
Trigger: CCCCTGCTGATGACGCCCCCACCACCACCGTTCCCC...ACCCACAGTGCACCTCTTCACAGGGGCCTGGGTACTGGAGGGAGGGATACAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000612395.1
CDS-3UTR CCA 90 bp CCCATTGCCTCACTTCAGGACCTGCCAAGGGGCTTCCTGGGTGCAGTGGTGAGACCAGGGAGCGCCTCGTaGCCAACAGTGGAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: PIASLQDLPRGFLGAVVRPGSAS*PTVEVG
Trigger: CCCCACCTCCACTGTTGGCCACGAGGCGCTCCCTGG...TCTCACCACTGCACCCAGGAAGCCCCTTGGCAGGTCCTGAAGTGAGGCAATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR CCA 90 bp CTGATAAGCCTGTCGCCTGACTGCACCCTCCTCTGTCCCAGGGGGCCTGGATGCGGGGTTCCCTGGCCCTaGGCCTCCTCTTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: LISLSPDCTLLCPRGPGCGVPWP*ASSSSI
Trigger: GATGGAAGAAGAGGAGGCCCAGGGCCAGGGAACCCC...GCATCCAGGCCCCCTGGGACAGAGGAGGGTGCAGTCAGGCGACAGGCTTATCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000612395.1
CDS-3UTR CCA 90 bp TTGAGGCAGGGAGTCCTGATAAGCCTGTCGCCTGACTGCACCCTCCTCTGTCCCGGGGCTGGGGTTCCCTaGCCCTGGGCCTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: LRQGVLISLSPDCTLLCPGAGVP*PWASSS
Trigger: AGAAGAGGAGGCCCAGGGCCAGGGAACCCCAGCCCC...GGGACAGAGGAGGGTGCAGTCAGGCGACAGGCTTATCAGGACTCCCTGCCTCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000612395.1
CDS-3UTR CCA 90 bp CATCCAACAGCTTGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGAAGAGGCTGGTCAGGATaGCCAGGCCAGGCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: HPTACPLPSRFCLDNPQGRGWSG*PGQAGL
Trigger: CAGCCCGGCCTGGCCTGGCCATCCTGACCAGCCTCT...TCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCAAGCTGTTGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGAGTCTCGGAGGGGCCGGGCTaGTCATCTGCTCCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: PLPSRFCLDNPQGLRQGVSEGPG*SSAPWE
Trigger: TTCCCAGGGAGCAGATGACCAGCCCGGCCCCTCCGA...GACTCCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CATCCAACAGCTTGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGACGCGCTCATCCCGCGTaGGCACCAGCCCGTCGATGT +
Preference number: 4 (lower is better)
Translates to: HPTACPLPSRFCLDNPQGRAHPA*APARRC
Trigger: ACATCGACGGGCTGGTGCCCACGCGGGATGAGCGCG...TCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCAAGCTGTTGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp TTGAGGCAGGGAGTCCTGATAAGCCTGTCGCCTGACTGCACCCTCCTCTGTCCCCGCGCTCATCCCGCGTaGGCACCAGCCCGTCGATGT +
Preference number: 4 (lower is better)
Translates to: LRQGVLISLSPDCTLLCPRAHPA*APARRC
Trigger: ACATCGACGGGCTGGTGCCCACGCGGGATGAGCGCG...GGGACAGAGGAGGGTGCAGTCAGGCGACAGGCTTATCAGGACTCCCTGCCTCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp GGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACCCTGCCGCTTCCACTCTGGGATaGGCTGGCCGCGCTCATCCC +
Preference number: 4 (lower is better)
Translates to: GILLCVQQPLRVGTSHPAASTLG*AGRAHP
Trigger: GGGATGAGCGCGGCCAGCCCATCCCAGAGTGGAAGC...GGCAGGGTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CATCCAACAGCTTGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGAAGGCCGCCTGCTCCGTaGGGCCTGAGCTCCCACCAT +
Preference number: 4 (lower is better)
Translates to: HPTACPLPSRFCLDNPQGRPPAP*GLSSHH
Trigger: ATGGTGGGAGCTCAGGCCCCACGGAGCAGGCGGCCT...TCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCAAGCTGTTGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CCTAGTCAGCTGCGAGGGTCTCTCTGTTCCATCCAACAGCTTGCCCGCTGCCCTAGGCCGCCTGCTCCGTaGGGCCTGAGCTCCCACCAT +
Preference number: 4 (lower is better)
Translates to: PSQLRGSLCSIQQLARCPRPPAP*GLSSHH
Trigger: ATGGTGGGAGCTCAGGCCCCACGGAGCAGGCGGCCT...AGGGCAGCGGGCAAGCTGTTGGATGGAACAGAGAGACCCTCGCAGCTGACTAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp TGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGACCTGCAGGGGCCGGGTaGATGGCTTCTCATCCCCCT +
Preference number: 4 (lower is better)
Translates to: CPLPSRFCLDNPQGLRQGPAGAG*MASHPP
Trigger: AGGGGGATGAGAAGCCATCCACCCGGCCCCTGCAGG...TCCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGAGTCCCTGCAGGGGCCGGGTaGATGGCTTCTCATCCCCCT +
Preference number: 4 (lower is better)
Translates to: PLPSRFCLDNPQGLRQGVPAGAG*MASHPP
Trigger: AGGGGGATGAGAAGCCATCCACCCGGCCCCTGCAGG...GACTCCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp TGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGAGGGCTTAGGCAGGGCTaGCCAGCAGCCACTCAGGCA +
Preference number: 4 (lower is better)
Translates to: CPLPSRFCLDNPQGLRQGGLRQG*PAATQA
Trigger: TGCCTGAGTGGCTGCTGGCCAGCCCTGCCTAAGCCC...TCCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CCCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCAGGGCTTAGGCAGGGCTaGCCAGCAGCCACTCAGGCA +
Preference number: 4 (lower is better)
Translates to: PCRHSPLCAAAFESGHQPGLRQG*PAATQA
Trigger: TGCCTGAGTGGCTGCTGGCCAGCCCTGCCTAAGCCC...TGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACGGGCTTAGGCAGGGCTaGCCAGCAGCCACTCAGGCA +
Preference number: 4 (lower is better)
Translates to: PAGILLCVQQPLRVGTSHGLRQG*PAATQA
Trigger: TGCCTGAGTGGCTGCTGGCCAGCCCTGCCTAAGCCC...GTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CATCCAACAGCTTGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGACTGTGTCGCCAGGCCTaGGCTCCCCTGAAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: HPTACPLPSRFCLDNPQGLCRQA*APLKPG
Trigger: GCCTGGCTTCAGGGGAGCCCAGGCCTGGCGACACAG...TCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCAAGCTGTTGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CAGCTCGGAGGAGAACCATGCCACAACAGAACAGTCCCGCAGCCTCCGATAACTCCCCGCAACCCCGCGTaGCGGGCTCCTAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: QLGGEPCHNRTVPQPPITPRNPA*RAPRVL
Trigger: CAGGACCCTAGGAGCCCGCCACGCGGGGTTGCGGGG...AGTTATCGGAGGCTGCGGGACTGTTCTGTTGTGGCATGGTTCTCCTCCGAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR CCA 90 bp TCAGCAGTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAACAGTTGCCCAGCAGGTaGGTGATGGTGCTGCGCTGC +
Preference number: 4 (lower is better)
Translates to: SAVEEAGAGRLQDRPLWKQLPSR*VMVLRC
Trigger: GCAGCGCAGCACCATCACCCACCTGCTGGGCAACTG...TTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCACTGCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CTGATAAGCCTGTCGCCTGACTGCACCCTCCTCTGTCCCAGGGGGCCTGGATGCTCGAAGCACAGCAGGTaGCGCAGCTTCCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LISLSPDCTLLCPRGPGCSKHSR*RSFRSS
Trigger: GGAGGAGCGGAAGCTGCGCCACCTGCTGTGCTTCGA...GCATCCAGGCCCCCTGGGACAGAGGAGGGTGCAGTCAGGCGACAGGCTTATCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CCCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCATCGGTCACGGCCTTGTaGAAGGCGCGCACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: PCRHSPLCAAAFESGHQPSVTAL*KARTAS
Trigger: GGAGGCTGTGCGCGCCTTCCACAAGGCCGTGACCGA...TGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CTGTCCCAGGGGGCCTGGATGCCAGGAGGAATATTCCTGAAGCCTCCCGTCCCTTCGGTCACGGCCTTGTaGAAGGCGCGCACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: LSQGAWMPGGIFLKPPVPSVTAL*KARTAS
Trigger: GGAGGCTGTGCGCGCCTTCCACAAGGCCGTGACCGA...AGGGACGGGAGGCTTCAGGAATATTCCTCCTGGCATCCAGGCCCCCTGGGACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp ACTCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCTCGGTCACGGCCTTGTaGAAGGCGCGCACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: TPQHPEPPRTESISLPVSSVTAL*KARTAS
Trigger: GGAGGCTGTGCGCGCCTTCCACAAGGCCGTGACCGA...GGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp GTCCCAGGGGGCCTGGATGCCAGGAGGAATATTCCTGAAGCCTCCCGTCCCTGCAGGCGGGACGCTGGCTaGAGCCAAAGAAGCGGGCTT +
Preference number: 4 (lower is better)
Translates to: VPGGLDARRNIPEASRPCRRDAG*SQRSGL
Trigger: AAGCCCGCTTCTTTGGCTCCAGCCAGCGTCCCGCCT...GCAGGGACGGGAGGCTTCAGGAATATTCCTCCTGGCATCCAGGCCCCCTGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp GGCCCTTGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCAGGCGGGACGCTGGCTaGAGCCAAAGAAGCGGGCTT +
Preference number: 4 (lower is better)
Translates to: GPCGKATGLGLRPVLLPFRRDAG*SQRSGL
Trigger: AAGCCCGCTTCTTTGGCTCCAGCCAGCGTCCCGCCT...GAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACAAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp TCAGCAGTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAAAGGCGGGACGCTGGCTaGAGCCAAAGAAGCGGGCTT +
Preference number: 4 (lower is better)
Translates to: SAVEEAGAGRLQDRPLWKRRDAG*SQRSGL
Trigger: AAGCCCGCTTCTTTGGCTCCAGCCAGCGTCCCGCCT...TTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCACTGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp GGCCCTTGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCAGAGGTGCCCTGGACTaGGGTGGCCCATTGCCTCAC +
Preference number: 4 (lower is better)
Translates to: GPCGKATGLGLRPVLLPFRGALD*GGPLPH
Trigger: GTGAGGCAATGGGCCACCCCAGTCCAGGGCACCTCT...GAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACAAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp GGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACCCTGCCTGGGCAGAGGTGCCCTaGACTGGGGTGGCCCATTGC +
Preference number: 4 (lower is better)
Translates to: GILLCVQQPLRVGTSHPAWAEVP*TGVAHC
Trigger: GCAATGGGCCACCCCAGTCCAGGGCACCTCTGCCCA...GGCAGGGTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp TCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCTTGGGCAGAGGTGCCCTaGACTGGGGTGGCCCATTGC +
Preference number: 4 (lower is better)
Translates to: SAAPRAPEDGIHLPSCIPWAEVP*TGVAHC
Trigger: GCAATGGGCCACCCCAGTCCAGGGCACCTCTGCCCA...AGGGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp GGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACCCTGCCGGCAGGACCAGGGCCTaGGGCCACCTCAGACTCACA +
Preference number: 4 (lower is better)
Translates to: GILLCVQQPLRVGTSHPAGRTRA*GHLRLT
Trigger: TGTGAGTCTGAGGTGGCCCCAGGCCCTGGTCCTGCC...GGCAGGGTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGAGTCGGCAGGACCAGGGCCTaGGGCCACCTCAGACTCACA +
Preference number: 4 (lower is better)
Translates to: PLPSRFCLDNPQGLRQGVGRTRA*GHLRLT
Trigger: TGTGAGTCTGAGGTGGCCCCAGGCCCTGGTCCTGCC...GACTCCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CCCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCAGGCAGGACCAGGGCCTaGGGCCACCTCAGACTCACA +
Preference number: 4 (lower is better)
Translates to: PCRHSPLCAAAFESGHQPGRTRA*GHLRLT
Trigger: TGTGAGTCTGAGGTGGCCCCAGGCCCTGGTCCTGCC...TGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp TCCTGTATCCCTCCCTCCAGTACCCAGGCCCCTGTGAAGAGGTGCACTGTGGGTCAGGGCTGGTCAGGCTaGAGGACAGGGGCCCCATGG +
Preference number: 4 (lower is better)
Translates to: SCIPPSSTQAPVKRCTVGQGWSG*RTGAPW
Trigger: CCATGGGGCCCCTGTCCTCCAGCCTGACCAGCCCTG...ACCCACAGTGCACCTCTTCACAGGGGCCTGGGTACTGGAGGGAGGGATACAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp GCTGCTGCCCACCCCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGCTCTCCAGCCTTGCTaGGGCCCACGACTAGGCCAG +
Preference number: 4 (lower is better)
Translates to: AAAHPCRHSPLCAAAFESALQPC*GPRLGQ
Trigger: CTGGCCTAGTCGTGGGCCCCAGCAAGGCTGGAGAGC...ACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGGGGTGGGCAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp GGCCCTTGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCCCCTGCCTGCCCCAATaGCCAATACCACCCCTCCCA +
Preference number: 4 (lower is better)
Translates to: GPCGKATGLGLRPVLLPFPCLPQ*PIPPLP
Trigger: TGGGAGGGGTGGTATTGGCCATTGGGGCAGGCAGGG...GAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACAAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp GGCCCTTGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCGAAAAGCCACTGGCTTaGGGCTGCGGCCGGTGCTAC +
Preference number: 4 (lower is better)
Translates to: GPCGKATGLGLRPVLLPFEKPLA*GCGRCY
Trigger: GTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTC...GAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACAAGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp TGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCCCGGCCTTGTGGAAAAGCCACTaGCTTGGGGCTGCGGCCGGT +
Preference number: 4 (lower is better)
Translates to: CGKATGLGLRPVLLPFPALWKSH*LGAAAG
Trigger: ACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACAA...GGCCGGGAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp GGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACCCTGCCCAGGGTCTTCAGCAGTaGAGGAAGCCGGAGCGGGCC +
Preference number: 4 (lower is better)
Translates to: GILLCVQQPLRVGTSHPAQGLQQ*RKPERA
Trigger: GGCCCGCTCCGGCTTCCTCCACTGCTGAAGACCCTG...GGCAGGGTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CAGAGCCTGGGTGATGACCCATTCTCCTGGCTGCCATCAGAAGCTGGGGACAAGTCTCTGGGGAGTCAGTaGGGCCCGCCCCCGCCTGGT +
Preference number: 4 (lower is better)
Translates to: QSLGDDPFSWLPSEAGDKSLGSQ*GPPPPG
Trigger: ACCAGGCGGGGGCGGGCCCCACTGACTCCCCAGAGA...CTTGTCCCCAGCTTCTGATGGCAGCCAGGAGAATGGGTCATCACCCAGGCTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409506.1
CDS-3UTR TCA 90 bp CATCCAACAGCTTGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGACTGCTCCGTGGGGCCTaGGCTCCCACCATTGTCCTG +
Preference number: 4 (lower is better)
Translates to: HPTACPLPSRFCLDNPQGLLRGA*APTIVL
Trigger: CAGGACAATGGTGGGAGCTCAGGCCCCACGGAGCAG...TCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCAAGCTGTTGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp TGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGAGGCCTGATGAGTCTGTaGGTACCTCCAGGCCGCCTG +
Preference number: 4 (lower is better)
Translates to: CPLPSRFCLDNPQGLRQGGLMSL*VPPGRL
Trigger: CAGGCGGCCTGGAGGTACTCACAGACTCATCAGGCC...TCCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp CTGTCCCAGGGGGCCTGGATGCCAGGAGGAATATTCCTGAAGCCTCCCGTCCCTGGCCTGATGAGTCTGTaGGTACCTCCAGGCCGCCTG +
Preference number: 4 (lower is better)
Translates to: LSQGAWMPGGIFLKPPVPGLMSL*VPPGRL
Trigger: CAGGCGGCCTGGAGGTACTCACAGACTCATCAGGCC...AGGGACGGGAGGCTTCAGGAATATTCCTCCTGGCATCCAGGCCCCCTGGGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp GGTGATGACCCATTCTCCTGGCTGCCATCAGAAGCTGGGGACAAGCCACACCCTCGCAGGGGCCAGGGTTaGAGCCACAGAGTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GDDPFSWLPSEAGDKPHPRRGQG*SHRVGQ
Trigger: CTGGCCCACTCTGTGGCTTCAACCCTGGCCCCTGCG...AGGGTGTGGCTTGTCCCCAGCTTCTGATGGCAGCCAGGAGAATGGGTCATCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp CATCCAACAGCTTGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGAGCACCTCCTCGCAGCTaGTGCCAGAGTCGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: HPTACPLPSRFCLDNPQGAPPRS*CQSRWP
Trigger: AGGCCAGCGACTCTGGCATCAGCTGCGAGGAGGTGC...TCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCAAGCTGTTGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp TCTGAGTCCCAGCTCGGAGGAGAACCATGCCACAACAGAACAGTCCCGCAGCCTTGCCCAGCAGGTGGGTaGTGGTGCTGCGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: SESQLGGEPCHNRTVPQPCPAGG*WCCAAA
Trigger: GGCAGCAGCGCAGCACCATCACCCACCTGCTGGGCA...AGGCTGCGGGACTGTTCTGTTGTGGCATGGTTCTCCTCCGAGCTGGGACTCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR TCA 90 bp TCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCTCGGGCACGTGAGCCATaGTGGCCTTCCAGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: SAAPRAPEDGIHLPSCIPRAREP*WPSSCP
Trigger: TGGGCAACTGGAAGGCCATCATGGCTCACGTGCCCG...AGGGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp TCAGCAGTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAACAGCACCACAGAAACTaGGGGACAGGACGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: SAVEEAGAGRLQDRPLWKQHHRN*GTGRQG
Trigger: CCCTTGGCGTCCTGTCCCTCAGTTTCTGTGGTGCTG...TTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCACTGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp CCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGAGTCGTACCCAGGCCCCTGTaGAGAGGTGCACTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: PLPSRFCLDNPQGLRQGVVPRPL*RGALWV
Trigger: CACCCACAGTGCACCTCTTCACAGGGGCCTGGGTAC...GACTCCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp CTGTCCCAGGGGGCCTGGATGCCAGGAGGAATATTCCTGAAGCCTCCCGTCCCTGTACCCAGGCCCCTGTaGAGAGGTGCACTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: LSQGAWMPGGIFLKPPVPVPRPL*RGALWV
Trigger: CACCCACAGTGCACCTCTTCACAGGGGCCTGGGTAC...AGGGACGGGAGGCTTCAGGAATATTCCTCCTGGCATCCAGGCCCCCTGGGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp GTCCCAGGGGGCCTGGATGCCAGGAGGAATATTCCTGAAGCCTCCCGTCCCTGCCTCAGTGGCGACTCATaGACAGGCTGGGGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: VPGGLDARRNIPEASRPCLSGDS*TGWGFL
Trigger: CAGGAAGCCCCAGCCTGTGCATGAGTCGCCACTGAG...GCAGGGACGGGAGGCTTCAGGAATATTCCTCCTGGCATCCAGGCCCCCTGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343063.8
CDS-3UTR GCA 90 bp TGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGAGGCAGCTGGGCCCGCTaGACCAAGAACTTGACGCAG +
Preference number: 4 (lower is better)
Translates to: CPLPSRFCLDNPQGLRQGGSWAR*TKNLTQ
Trigger: CTGCGTCAAGTTCTTGGTGCAGCGGGCCCAGCTGCC...TCCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR GCA 90 bp CAGCTCGGAGGAGAACCATGCCACAACAGAACAGTCCCGCAGCCTCCGATAACTGTGGCAGCGGCGTCATaGGCTGGGGTGGCCCCGTTG +
Preference number: 4 (lower is better)
Translates to: QLGGEPCHNRTVPQPPITVAAAS*AGVAPL
Trigger: CAACGGGGCCACCCCAGCGCATGACGCCGCTGCCAC...AGTTATCGGAGGCTGCGGGACTGTTCTGTTGTGGCATGGTTCTCCTCCGAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR GCA 90 bp TCTGAGTCCCAGCTCGGAGGAGAACCATGCCACAACAGAACAGTCCCGCAGCCTACAGCTCGGCCAGGCTaGCCGTGGCAGCGGCGTCAT +
Preference number: 4 (lower is better)
Translates to: SESQLGGEPCHNRTVPQPTARPG*PWQRRH
Trigger: ATGACGCCGCTGCCACGGGCAGCCTGGCCGAGCTGT...AGGCTGCGGGACTGTTCTGTTGTGGCATGGTTCTCCTCCGAGCTGGGACTCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR GCA 90 bp GGCCCTTGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCTTCACGCTGCTGCCATaGGCGGCTGTCAGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: GPCGKATGLGLRPVLLPFFTLLP*AAVRSL
Trigger: CAAGCTCCTGACAGCCGCGCATGGCAGCAGCGTGAA...GAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACAAGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR GCA 90 bp GGCCCTTGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCTCGAGAGCACGAAGGTaGACGTCAGCGCCACAGTCC +
Preference number: 4 (lower is better)
Translates to: GPCGKATGLGLRPVLLPFSRARR*TSAPQS
Trigger: GGACTGTGGCGCTGACGTGCACCTTCGTGCTCTCGA...GAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACAAGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR GCA 90 bp GTCCCAGGGGGCCTGGATGCCAGGAGGAATATTCCTGAAGCCTCCCGTCCCTGCCCCCTCATTGTCCCGTaGCGTGAGTCCGATGTCGGT +
Preference number: 4 (lower is better)
Translates to: VPGGLDARRNIPEASRPCPLIVP*RESDVG
Trigger: ACCGACATCGGACTCACGGCACGGGACAATGAGGGG...GCAGGGACGGGAGGCTTCAGGAATATTCCTCCTGGCATCCAGGCCCCCTGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR GCA 90 bp CAGCTCGGAGGAGAACCATGCCACAACAGAACAGTCCCGCAGCCTCCGATAACTCTCTGCGGAGCTCTCTaGGCCCAGGCGCGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: QLGGEPCHNRTVPQPPITLCGAL*AQARLQ
Trigger: CTGCAGGCGCGCCTGGGCGCAGAGAGCTCCGCAGAG...AGTTATCGGAGGCTGCGGGACTGTTCTGTTGTGGCATGGTTCTCCTCCGAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR GCA 90 bp CCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTATTGTCCTGGGCCTCTaGGGAGCTCTCTGCGCCCAG +
Preference number: 4 (lower is better)
Translates to: PRNTPQHPEPPRTESISLIVLGL*GALCAQ
Trigger: CTGGGCGCAGAGAGCTCCGCAGAGGCCCAGGACAAT...AAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CCCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCAATTGTCCTGGGCCTCTaGGGAGCTCTCTGCGCCCAG +
Preference number: 4 (lower is better)
Translates to: PCRHSPLCAAAFESGHQPIVLGL*GALCAQ
Trigger: CTGGGCGCAGAGAGCTCCGCAGAGGCCCAGGACAAT...TGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp GTCCCAGGGGGCCTGGATGCCAGGAGGAATATTCCTGAAGCCTCCCGTCCCTGCCAGCGGCGCCGAAGCTaGAGGTCTGCAATCTGCTTC +
Preference number: 4 (lower is better)
Translates to: VPGGLDARRNIPEASRPCQRRRS*RSAICF
Trigger: GAAGCAGATTGCAGACCTGCAGCTTCGGCGCCGCTG...GCAGGGACGGGAGGCTTCAGGAATATTCCTCCTGGCATCCAGGCCCCCTGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp TCCTGTATCCCTCCCTCCAGTACCCAGGCCCCTGTGAAGAGGTGCACTGTGGGTGGCGGGAGATGTGGCTaGACCAGAAGGGCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: SCIPPSSTQAPVKRCTVGGGRCG*TRRAGA
Trigger: AGCCCCTGCCCTTCTGGTGCAGCCACATCTCCCGCC...ACCCACAGTGCACCTCTTCACAGGGGCCTGGGTACTGGAGGGAGGGATACAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CCCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCAGCAGCAGGGACAGGCTaGGTACCAGGCGGGAGATGT +
Preference number: 4 (lower is better)
Translates to: PCRHSPLCAAAFESGHQPAAGTG*VPGGRC
Trigger: ACATCTCCCGCCTGGTACGCAGCCTGTCCCTGCTGC...TGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp TCCTGTATCCCTCCCTCCAGTACCCAGGCCCCTGTGAAGAGGTGCACTGTGGGTAGGCCGACTCGAAGTTaGCCCGCAGCGTCCGCACAG +
Preference number: 4 (lower is better)
Translates to: SCIPPSSTQAPVKRCTVGRPTRS*PAASAQ
Trigger: CTGTGCGGACGCTGCGGGGCAACTTCGAGTCGGCCT...ACCCACAGTGCACCTCTTCACAGGGGCCTGGGTACTGGAGGGAGGGATACAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CAGAGCCTGGGTGATGACCCATTCTCCTGGCTGCCATCAGAAGCTGGGGACAAGATGGTGCTGCGCTGCTaGCACAGGTGGCCCAGCCGG +
Preference number: 4 (lower is better)
Translates to: QSLGDDPFSWLPSEAGDKMVLRC*HRWPSR
Trigger: CCGGCTGGGCCACCTGTGGCAGCAGCGCAGCACCAT...CTTGTCCCCAGCTTCTGATGGCAGCCAGGAGAATGGGTCATCACCCAGGCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp TTGAGGCAGGGAGTCCTGATAAGCCTGTCGCCTGACTGCACCCTCCTCTGTCCCGTGATGGTGCTGCGCTaGTGCCACAGGTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: LRQGVLISLSPDCTLLCPVMVLR*CHRWPS
Trigger: GCTGGGCCACCTGTGGCAGCAGCGCAGCACCATCAC...GGGACAGAGGAGGGTGCAGTCAGGCGACAGGCTTATCAGGACTCCCTGCCTCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CCTAGTCAGCTGCGAGGGTCTCTCTGTTCCATCCAACAGCTTGCCCGCTGCCCTGTGATGGTGCTGCGCTaGTGCCACAGGTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: PSQLRGSLCSIQQLARCPVMVLR*CHRWPS
Trigger: GCTGGGCCACCTGTGGCAGCAGCGCAGCACCATCAC...AGGGCAGCGGGCAAGCTGTTGGATGGAACAGAGAGACCCTCGCAGCTGACTAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CCCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCAGATCCAGTGAGAGGCTaGTGTAGGGCACCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: PCRHSPLCAAAFESGHQPDPVRG*CRAPEP
Trigger: GGGCTCCGGTGCCCTACAGCAGCCTCTCACTGGATC...TGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp AGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCTCCCTCGATCCAGTGAGAGGCTaGTGTAGGGCACCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: STQSPRGRNPSPFLYPSLDPVRG*CRAPEP
Trigger: GGGCTCCGGTGCCCTACAGCAGCCTCTCACTGGATC...GAGGGAGGGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp TTGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGCCGTGGGTGCCCAGGTaGTCGAAGACCTCGAAGCAC +
Preference number: 4 (lower is better)
Translates to: LPAALQVLPGQSPGIEAGPWVPR*SKTSKH
Trigger: GTGCTTCGAGGTCTTCGAGCACCTGGGCACCCACGG...CCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CCTAGTCAGCTGCGAGGGTCTCTCTGTTCCATCCAACAGCTTGCCCGCTGCCCTCCTCCCAGCCGTGGGTaGCCAGGTGCTCGAAGACCT +
Preference number: 4 (lower is better)
Translates to: PSQLRGSLCSIQQLARCPPPSRG*PGARRP
Trigger: AGGTCTTCGAGCACCTGGGCACCCACGGCTGGGAGG...AGGGCAGCGGGCAAGCTGTTGGATGGAACAGAGAGACCCTCGCAGCTGACTAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CATCCAACAGCTTGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGACCTCCCAGCCGTGGGTaGCCAGGTGCTCGAAGACCT +
Preference number: 4 (lower is better)
Translates to: HPTACPLPSRFCLDNPQGPPSRG*PGARRP
Trigger: AGGTCTTCGAGCACCTGGGCACCCACGGCTGGGAGG...TCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCAAGCTGTTGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp TGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGAGACTGGAGGCAGCCTTaGCCGGCTCACCTGAACACC +
Preference number: 4 (lower is better)
Translates to: CPLPSRFCLDNPQGLRQGDWRQP*PAHLNT
Trigger: GGTGTTCAGGTGAGCCGGGCAAGGCTGCCTCCAGTC...TCCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CTGATAAGCCTGTCGCCTGACTGCACCCTCCTCTGTCCCAGGGGGCCTGGATGCCCTCACTTCAGGACCTaGCAAGGGGCTTCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: LISLSPDCTLLCPRGPGCPHFRT*QGASWV
Trigger: CACCCAGGAAGCCCCTTGGCAGGTCCTGAAGTGAGG...GCATCCAGGCCCCCTGGGACAGAGGAGGGTGCAGTCAGGCGACAGGCTTATCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp GTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAAAGCCACACAAGCCACACCCTATaGCAGCCATGCCCAGCACCA +
Preference number: 4 (lower is better)
Translates to: VEEAGAGRLQDRPLWKSHTSHTL*QPCPAP
Trigger: TGGTGCTGGGCATGGCTGGCATAGGGTGTGGCTTGT...GTGGCTTTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CTGTCCCAGGGGGCCTGGATGCCAGGAGGAATATTCCTGAAGCCTCCCGTCCCTGTCCCTGCCACTCCCTaGTGGGCCATCTCACAGCTG +
Preference number: 4 (lower is better)
Translates to: LSQGAWMPGGIFLKPPVPVPATP*WAISQL
Trigger: CAGCTGTGAGATGGCCCAGCAGGGAGTGGCAGGGAC...AGGGACGGGAGGCTTCAGGAATATTCCTCCTGGCATCCAGGCCCCCTGGGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTAGCCTGTCGCCTGACTaGACCCTCCTCTGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: PRNTPQHPEPPRTESISLSLSPD*TLLCPR
Trigger: CCTGGGACAGAGGAGGGTGCAGTCAGGCGACAGGCT...AAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp GCTGCTGCCCACCCCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTAGCCTGTCGCCTGACTaGACCCTCCTCTGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: AAAHPCRHSPLCAAAFESSLSPD*TLLCPR
Trigger: CCTGGGACAGAGGAGGGTGCAGTCAGGCGACAGGCT...ACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGGGGTGGGCAGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp GTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAAAGCCACCTGCCCTCCAGGTTTTaGCTGGACAATCCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: VEEAGAGRLQDRPLWKSHLPSRF*LDNPQG
Trigger: TCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAG...GTGGCTTTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CAGTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAAAGCCTGGGCCCTAGTCAGCTaGGAGGGTCTCTCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: QWRKPERAGCRIGPCGKAWALVS*EGLSVP
Trigger: TGGAACAGAGAGACCCTCGCAGCTGACTAGGGCCCA...GGCTTTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CTGTCCCAGGGGGCCTGGATGCCAGGAGGAATATTCCTGAAGCCTCCCGTCCCTCTTCCCGGCCCTGCCTaGCCCAATGGCCAATACCAC +
Preference number: 4 (lower is better)
Translates to: LSQGAWMPGGIFLKPPVPLPGPA*PNGQYH
Trigger: GTGGTATTGGCCATTGGGGCAGGCAGGGCCGGGAAG...AGGGACGGGAGGCTTCAGGAATATTCCTCCTGGCATCCAGGCCCCCTGGGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CCCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACTTCCCGGCCCTGCCTaGCCCAATGGCCAATACCAC +
Preference number: 4 (lower is better)
Translates to: PCRHSPLCAAAFESGHQPLPGPA*PNGQYH
Trigger: GTGGTATTGGCCATTGGGGCAGGCAGGGCCGGGAAG...TGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp GTCCTCGGAATCACTCCAGCTCCCCCAAATTCACAGATGGGAGGTGAAGGGGTGTGGGGCTGCGGCCGGTaGTACTTCCCTTCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: VLGITPAPPNSQMGGEGVWGCGR*YFPSRP
Trigger: GGGCCGGGAAGGGAAGTAGCACCGGCCGCAGCCCCA...CACCCCTTCACCTCCCATCTGTGAATTTGGGGGAGCTGGAGTGATTCCGAGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR CCA 90 bp TTGAGGCAGGGAGTCCTGATAAGCCTGTCGCCTGACTGCACCCTCCTCTGTCCCGGCCCGGGCTCTCAGTaGCGACTCATGCACAGGCTG +
Preference number: 4 (lower is better)
Translates to: LRQGVLISLSPDCTLLCPGPGSQ*RLMHRL
Trigger: CAGCCTGTGCATGAGTCGCCACTGAGAGCCCGGGCC...GGGACAGAGGAGGGTGCAGTCAGGCGACAGGCTTATCAGGACTCCCTGCCTCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343063.8
CDS-3UTR CCA 90 bp ACTCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCTGCTTCTCCATCCTCTaGCCCGGGCTCTCAGTGGCG +
Preference number: 4 (lower is better)
Translates to: TPQHPEPPRTESISLPVSCFSIL*PGLSVA
Trigger: CGCCACTGAGAGCCCGGGCCAGAGGATGGAGAAGCA...GGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343063.8
CDS-3UTR CCA 90 bp CAGAGCCTGGGTGATGACCCATTCTCCTGGCTGCCATCAGAAGCTGGGGACAAGTTGACGCAGTCCAGGTaGCCAGCCCGGGTGGCGTGG +
Preference number: 4 (lower is better)
Translates to: QSLGDDPFSWLPSEAGDKLTQSR*PARVAW
Trigger: CCACGCCACCCGGGCTGGCCACCTGGACTGCGTCAA...CTTGTCCCCAGCTTCTGATGGCAGCCAGGAGAATGGGTCATCACCCAGGCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR CCA 90 bp TCTGAGTCCCAGCTCGGAGGAGAACCATGCCACAACAGAACAGTCCCGCAGCCTCCCGGGTCTCTAGCGTaGCCGAGTGGCCCTCGTGGA +
Preference number: 4 (lower is better)
Translates to: SESQLGGEPCHNRTVPQPPGSLA*PSGPRG
Trigger: TCCACGAGGGCCACTCGGCCACGCTAGAGACCCGGG...AGGCTGCGGGACTGTTCTGTTGTGGCATGGTTCTCCTCCGAGCTGGGACTCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR CCA 90 bp TCCTGTATCCCTCCCTCCAGTACCCAGGCCCCTGTGAAGAGGTGCACTGTGGGTGCAGGCCAGGTAGAGTaGGGAGGCGCCACTGCGTGT +
Preference number: 4 (lower is better)
Translates to: SCIPPSSTQAPVKRCTVGAGQVE*GGATAC
Trigger: ACACGCAGTGGCGCCTCCCCACTCTACCTGGCCTGC...ACCCACAGTGCACCTCTTCACAGGGGCCTGGGTACTGGAGGGAGGGATACAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR CCA 90 bp GGCCCTTGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCTCTAGAATGGGCGTGTaGCCGCCTCGGGCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: GPCGKATGLGLRPVLLPFSRMGV*PPRAAK
Trigger: CTTTGCAGCCCGAGGCGGCCACACGCCCATTCTAGA...GAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACAAGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR CCA 90 bp CTGTCCCAGGGGGCCTGGATGCCAGGAGGAATATTCCTGAAGCCTCCCGTCCCTAGGGAGGGGTCCACGTaGTGGGAGACTAGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: LSQGAWMPGGIFLKPPVPREGST*WETRVW
Trigger: CCAGACCCTAGTCTCCCACCACGTGGACCCCTCCCT...AGGGACGGGAGGCTTCAGGAATATTCCTCCTGGCATCCAGGCCCCCTGGGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343063.8
CDS-3UTR CCA 90 bp CCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACGGGGTTCCCTGGCCCTaGGCCTCCTCTTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: PAGILLCVQQPLRVGTSHGVPWP*ASSSSI
Trigger: GATGGAAGAAGAGGAGGCCCAGGGCCAGGGAACCCC...GTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000612395.1
CDS-3UTR CCA 90 bp ACTCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCGGGGTTCCCTGGCCCTaGGCCTCCTCTTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: TPQHPEPPRTESISLPVSGVPWP*ASSSSI
Trigger: GATGGAAGAAGAGGAGGCCCAGGGCCAGGGAACCCC...GGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000612395.1
CDS-3UTR CCA 90 bp GCTGCTGCCCACCCCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTTCCCTGGGAAGAGGCTaGTCAGGATGGCCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: AAAHPCRHSPLCAAAFESSLGRG*SGWPGQ
Trigger: CTGGCCTGGCCATCCTGACCAGCCTCTTCCCAGGGA...ACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGGGGTGGGCAGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACTCCCTGGGAAGAGGCTaGTCAGGATGGCCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: PAGILLCVQQPLRVGTSHSLGRG*SGWPGQ
Trigger: CTGGCCTGGCCATCCTGACCAGCCTCTTCCCAGGGA...GTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp TCCTGTATCCCTCCCTCCAGTACCCAGGCCCCTGTGAAGAGGTGCACTGTGGGTTCGGAGGGGCCGGGCTaGTCATCTGCTCCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: SCIPPSSTQAPVKRCTVGSEGPG*SSAPWE
Trigger: TTCCCAGGGAGCAGATGACCAGCCCGGCCCCTCCGA...ACCCACAGTGCACCTCTTCACAGGGGCCTGGGTACTGGAGGGAGGGATACAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CCCATTGCCTCACTTCAGGACCTGCCAAGGGGCTTCCTGGGTGCAGTGGTGAGAGCTTCCACTCTGGGATaGGCTGGCCGCGCTCATCCC +
Preference number: 4 (lower is better)
Translates to: PIASLQDLPRGFLGAVVRASTLG*AGRAHP
Trigger: GGGATGAGCGCGGCCAGCCCATCCCAGAGTGGAAGC...TCTCACCACTGCACCCAGGAAGCCCCTTGGCAGGTCCTGAAGTGAGGCAATGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR CCA 90 bp CATCCAACAGCTTGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGAGCTTCCACTCTGGGATaGGCTGGCCGCGCTCATCCC +
Preference number: 4 (lower is better)
Translates to: HPTACPLPSRFCLDNPQGASTLG*AGRAHP
Trigger: GGGATGAGCGCGGCCAGCCCATCCCAGAGTGGAAGC...TCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCAAGCTGTTGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CTGATAAGCCTGTCGCCTGACTGCACCCTCCTCTGTCCCAGGGGGCCTGGATGCCTCCCACCATTGTCCTaGGCCTCTGCGGAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: LISLSPDCTLLCPRGPGCLPPLS*ASAELS
Trigger: AGAGAGCTCCGCAGAGGCCCAGGACAATGGTGGGAG...GCATCCAGGCCCCCTGGGACAGAGGAGGGTGCAGTCAGGCGACAGGCTTATCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp GCCATGCCCAGCACCATGCCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGCAAAGGGCCCCAGGATaGCCTGATGAGTCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: AMPSTMPRNTPQHPEPPRQRAPG*PDESVS
Trigger: ACTCACAGACTCATCAGGCCATCCTGGGGCCCTTTG...CCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGGCATGGTGCTGGGCATGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACGCCCGGGGCAGGAAGTaGCTGTTGACCGTGATGCTG +
Preference number: 4 (lower is better)
Translates to: PAGILLCVQQPLRVGTSHARGRK*LLTVML
Trigger: CAGCATCACGGTCAACAGCCACTTCCTGCCCCGGGC...GTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp GGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACCCTGCCACCAGGCGGGAGATGTaGCTGCACCAGAAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GILLCVQQPLRVGTSHPATRREM*LHQKGR
Trigger: CCTGCCCTTCTGGTGCAGCCACATCTCCCGCCTGGT...GGCAGGGTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp TCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCTACCAGGCGGGAGATGTaGCTGCACCAGAAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SAAPRAPEDGIHLPSCIPTRREM*LHQKGR
Trigger: CCTGCCCTTCTGGTGCAGCCACATCTCCCGCCTGGT...AGGGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp TCTGAGTCCCAGCTCGGAGGAGAACCATGCCACAACAGAACAGTCCCGCAGCCTCCCCACTCCTGGATCTaGCGCTGGGCCTCGCTCCGA +
Preference number: 4 (lower is better)
Translates to: SESQLGGEPCHNRTVPQPPHSWI*RWASLR
Trigger: TCGGAGCGAGGCCCAGCGCCAGATCCAGGAGTGGGG...AGGCTGCGGGACTGTTCTGTTGTGGCATGGTTCTCCTCCGAGCTGGGACTCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR CCA 90 bp AGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCTCCCTCCAGTTGCCCAGCAGGTaGGTGATGGTGCTGCGCTGC +
Preference number: 4 (lower is better)
Translates to: STQSPRGRNPSPFLYPSLQLPSR*VMVLRC
Trigger: GCAGCGCAGCACCATCACCCACCTGCTGGGCAACTG...GAGGGAGGGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp TCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCTTCGAAGCACAGCAGGTaGCGCAGCTTCCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SAAPRAPEDGIHLPSCIPSKHSR*RSFRSS
Trigger: GGAGGAGCGGAAGCTGCGCCACCTGCTGTGCTTCGA...AGGGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CTGTCCCAGGGGGCCTGGATGCCAGGAGGAATATTCCTGAAGCCTCCCGTCCCTTCGAAGCACAGCAGGTaGCGCAGCTTCCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LSQGAWMPGGIFLKPPVPSKHSR*RSFRSS
Trigger: GGAGGAGCGGAAGCTGCGCCACCTGCTGTGCTTCGA...AGGGACGGGAGGCTTCAGGAATATTCCTCCTGGCATCCAGGCCCCCTGGGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CCTTGGGCCCTAGTCAGCTGCGAGGGTCTCTCTGTTCCATCCAACAGCTTGCCCTCCCAGGCGGGACGCTaGCTGGAGCCAAAGAAGCGG +
Preference number: 4 (lower is better)
Translates to: PWALVSCEGLSVPSNSLPSQAGR*LEPKKR
Trigger: CCGCTTCTTTGGCTCCAGCCAGCGTCCCGCCTGGGA...GGGCAAGCTGTTGGATGGAACAGAGAGACCCTCGCAGCTGACTAGGGCCCAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp GTCCTCGGAATCACTCCAGCTCCCCCAAATTCACAGATGGGAGGTGAAGGGGTGCCAGCCGCTGTGCTGTaGGCTCAGGGCCGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: VLGITPAPPNSQMGGEGVPAAVL*AQGRCR
Trigger: CCTGCAGCGGCCCTGAGCCCACAGCACAGCGGCTGG...CACCCCTTCACCTCCCATCTGTGAATTTGGGGGAGCTGGAGTGATTCCGAGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR CCA 90 bp AGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCTCCCTCAGAGGTGCCCTGGACTaGGGTGGCCCATTGCCTCAC +
Preference number: 4 (lower is better)
Translates to: STQSPRGRNPSPFLYPSLRGALD*GGPLPH
Trigger: GTGAGGCAATGGGCCACCCCAGTCCAGGGCACCTCT...GAGGGAGGGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CCTTGGGCCCTAGTCAGCTGCGAGGGTCTCTCTGTTCCATCCAACAGCTTGCCCTGGGCAGAGGTGCCCTaGACTGGGGTGGCCCATTGC +
Preference number: 4 (lower is better)
Translates to: PWALVSCEGLSVPSNSLPWAEVP*TGVAHC
Trigger: GCAATGGGCCACCCCAGTCCAGGGCACCTCTGCCCA...GGGCAAGCTGTTGGATGGAACAGAGAGACCCTCGCAGCTGACTAGGGCCCAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp TTGAGGCAGGGAGTCCTGATAAGCCTGTCGCCTGACTGCACCCTCCTCTGTCCCGGCAGGACCAGGGCCTaGGGCCACCTCAGACTCACA +
Preference number: 4 (lower is better)
Translates to: LRQGVLISLSPDCTLLCPGRTRA*GHLRLT
Trigger: TGTGAGTCTGAGGTGGCCCCAGGCCCTGGTCCTGCC...GGGACAGAGGAGGGTGCAGTCAGGCGACAGGCTTATCAGGACTCCCTGCCTCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp GGTGATGACCCATTCTCCTGGCTGCCATCAGAAGCTGGGGACAAGCCACACCCTGCTGGGGCACTGGCCTaGCGGGCATCGGTGTGTGAC +
Preference number: 4 (lower is better)
Translates to: GDDPFSWLPSEAGDKPHPAGALA*RASVCD
Trigger: GTCACACACCGATGCCCGCCAGGCCAGTGCCCCAGC...AGGGTGTGGCTTGTCCCCAGCTTCTGATGGCAGCCAGGAGAATGGGTCATCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp ACTCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCGAGTGTCCGTCCCCTTaGGCCCTAGTCAGCTGCGAG +
Preference number: 4 (lower is better)
Translates to: TPQHPEPPRTESISLPVSECPSP*ALVSCE
Trigger: CTCGCAGCTGACTAGGGCCCAAGGGGACGGACACTC...GGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp TTGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGGAAAAGCCACTGGCTTaGGGCTGCGGCCGGTGCTAC +
Preference number: 4 (lower is better)
Translates to: LPAALQVLPGQSPGIEAGEKPLA*GCGRCY
Trigger: GTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTC...CCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CTGATAAGCCTGTCGCCTGACTGCACCCTCCTCTGTCCCAGGGGGCCTGGATGCTTGTGGAAAAGCCACTaGCTTGGGGCTGCGGCCGGT +
Preference number: 4 (lower is better)
Translates to: LISLSPDCTLLCPRGPGCLWKSH*LGAAAG
Trigger: ACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACAA...GCATCCAGGCCCCCTGGGACAGAGGAGGGTGCAGTCAGGCGACAGGCTTATCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp TTGAGGCAGGGAGTCCTGATAAGCCTGTCGCCTGACTGCACCCTCCTCTGTCCCCAGGGTCTTCAGCAGTaGAGGAAGCCGGAGCGGGCC +
Preference number: 4 (lower is better)
Translates to: LRQGVLISLSPDCTLLCPQGLQQ*RKPERA
Trigger: GGCCCGCTCCGGCTTCCTCCACTGCTGAAGACCCTG...GGGACAGAGGAGGGTGCAGTCAGGCGACAGGCTTATCAGGACTCCCTGCCTCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp CAGCTCGGAGGAGAACCATGCCACAACAGAACAGTCCCGCAGCCTCCGATAACTCCCGTCGATGTCGCCTaGGGGCAGCCCATCCAGCTG +
Preference number: 4 (lower is better)
Translates to: QLGGEPCHNRTVPQPPITPVDVA*GQPIQL
Trigger: CAGCTGGATGGGCTGCCCTCAGGCGACATCGACGGG...AGTTATCGGAGGCTGCGGGACTGTTCTGTTGTGGCATGGTTCTCCTCCGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR TCA 90 bp CCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTTCACTCTCATACTCCTaGCAGCGGCGCCGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: PRNTPQHPEPPRTESISLSLSYS*QRRRSC
Trigger: GCAGCTTCGGCGCCGCTGTCAGGAGTATGAGAGTGA...AAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp GTCCTCGGAATCACTCCAGCTCCCCCAAATTCACAGATGGGAGGTGAAGGGGTGCGCAGGGGCCAGGGTTaGAGCCACAGAGTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: VLGITPAPPNSQMGGEGVRRGQG*SHRVGQ
Trigger: CTGGCCCACTCTGTGGCTTCAACCCTGGCCCCTGCG...CACCCCTTCACCTCCCATCTGTGAATTTGGGGGAGCTGGAGTGATTCCGAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR TCA 90 bp TTGAGGCAGGGAGTCCTGATAAGCCTGTCGCCTGACTGCACCCTCCTCTGTCCCCGGGCACGTGAGCCATaGTGGCCTTCCAGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: LRQGVLISLSPDCTLLCPRAREP*WPSSCP
Trigger: TGGGCAACTGGAAGGCCATCATGGCTCACGTGCCCG...GGGACAGAGGAGGGTGCAGTCAGGCGACAGGCTTATCAGGACTCCCTGCCTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp CCTAGTCAGCTGCGAGGGTCTCTCTGTTCCATCCAACAGCTTGCCCGCTGCCCTCGGGCACGTGAGCCATaGTGGCCTTCCAGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: PSQLRGSLCSIQQLARCPRAREP*WPSSCP
Trigger: TGGGCAACTGGAAGGCCATCATGGCTCACGTGCCCG...AGGGCAGCGGGCAAGCTGTTGGATGGAACAGAGAGACCCTCGCAGCTGACTAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp TGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGACAGCACCACAGAAACTaGGGGACAGGACGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: CPLPSRFCLDNPQGLRQGQHHRN*GTGRQG
Trigger: CCCTTGGCGTCCTGTCCCTCAGTTTCTGTGGTGCTG...TCCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp CCCATTGCCTCACTTCAGGACCTGCCAAGGGGCTTCCTGGGTGCAGTGGTGAGAGTGTGCAGCAGCCTTTaGGAGTGGGCACCAGCCACC +
Preference number: 4 (lower is better)
Translates to: PIASLQDLPRGFLGAVVRVCSSL*EWAPAT
Trigger: GGTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACAC...TCTCACCACTGCACCCAGGAAGCCCCTTGGCAGGTCCTGAAGTGAGGCAATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR TCA 90 bp CCTTGGGCCCTAGTCAGCTGCGAGGGTCTCTCTGTTCCATCCAACAGCTTGCCCGTGTGCAGCAGCCTTTaGGAGTGGGCACCAGCCACC +
Preference number: 4 (lower is better)
Translates to: PWALVSCEGLSVPSNSLPVCSSL*EWAPAT
Trigger: GGTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACAC...GGGCAAGCTGTTGGATGGAACAGAGAGACCCTCGCAGCTGACTAGGGCCCAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp CAGAGCCTGGGTGATGACCCATTCTCCTGGCTGCCATCAGAAGCTGGGGACAAGGAGGTGCACTGTGGGTaGCACCCAGGTGCCCTCACG +
Preference number: 4 (lower is better)
Translates to: QSLGDDPFSWLPSEAGDKEVHCG*HPGALT
Trigger: CGTGAGGGCACCTGGGTGTCACCCACAGTGCACCTC...CTTGTCCCCAGCTTCTGATGGCAGCCAGGAGAATGGGTCATCACCCAGGCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp CATCCAACAGCTTGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGAGTACCCAGGCCCCTGTaGAGAGGTGCACTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: HPTACPLPSRFCLDNPQGVPRPL*RGALWV
Trigger: CACCCACAGTGCACCTCTTCACAGGGGCCTGGGTAC...TCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCAAGCTGTTGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp CTGTCCCAGGGGGCCTGGATGCCAGGAGGAATATTCCTGAAGCCTCCCGTCCCTGATAAGCCTGTCGCCTaGCTGCACCCTCCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: LSQGAWMPGGIFLKPPVPDKPVA*LHPPLS
Trigger: GGACAGAGGAGGGTGCAGTCAGGCGACAGGCTTATC...AGGGACGGGAGGCTTCAGGAATATTCCTCCTGGCATCCAGGCCCCCTGGGACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp TTGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGGATAAGCCTGTCGCCTaGCTGCACCCTCCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: LPAALQVLPGQSPGIEAGDKPVA*LHPPLS
Trigger: GGACAGAGGAGGGTGCAGTCAGGCGACAGGCTTATC...CCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp GCTGCTGCCCACCCCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTTCGAGAGCACGAAGGTaGACGTCAGCGCCACAGTCC +
Preference number: 4 (lower is better)
Translates to: AAAHPCRHSPLCAAAFESSRARR*TSAPQS
Trigger: GGACTGTGGCGCTGACGTGCACCTTCGTGCTCTCGA...ACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGGGGTGGGCAGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR GCA 90 bp GCTGCTGCCCACCCCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTCGTGCAGGGCGCTCATaGCATCGAGAGCACGAAGGT +
Preference number: 4 (lower is better)
Translates to: AAAHPCRHSPLCAAAFESRAGRS*HREHEG
Trigger: ACCTTCGTGCTCTCGATGGCATGAGCGCCCTGCACG...ACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGGGGTGGGCAGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR GCA 90 bp GCTGCTGCCCACCCCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTCCCTGTACTAGCCCATaGACGCCCTTCAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: AAAHPCRHSPLCAAAFESPCTSP*TPFSSR
Trigger: CCTGCTGCTGAAGGGCGTGCATGGGCTAGTACAGGG...ACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGGGGTGGGCAGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp TGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGACCCTGTACTAGCCCATaGACGCCCTTCAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: CPLPSRFCLDNPQGLRQGPCTSP*TPFSSR
Trigger: CCTGCTGCTGAAGGGCGTGCATGGGCTAGTACAGGG...TCCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CCTTGGGCCCTAGTCAGCTGCGAGGGTCTCTCTGTTCCATCCAACAGCTTGCCCGATCCAGTGAGAGGCTaGTGTAGGGCACCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: PWALVSCEGLSVPSNSLPDPVRG*CRAPEP
Trigger: GGGCTCCGGTGCCCTACAGCAGCCTCTCACTGGATC...GGGCAAGCTGTTGGATGGAACAGAGAGACCCTCGCAGCTGACTAGGGCCCAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CATCCAACAGCTTGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGACCGTGGGTGCCCAGGTaGTCGAAGACCTCGAAGCAC +
Preference number: 4 (lower is better)
Translates to: HPTACPLPSRFCLDNPQGPWVPR*SKTSKH
Trigger: GTGCTTCGAGGTCTTCGAGCACCTGGGCACCCACGG...TCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCAAGCTGTTGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp TCCTGTATCCCTCCCTCCAGTACCCAGGCCCCTGTGAAGAGGTGCACTGTGGGTCCGTGGGTGCCCAGGTaGTCGAAGACCTCGAAGCAC +
Preference number: 4 (lower is better)
Translates to: SCIPPSSTQAPVKRCTVGPWVPR*SKTSKH
Trigger: GTGCTTCGAGGTCTTCGAGCACCTGGGCACCCACGG...ACCCACAGTGCACCTCTTCACAGGGGCCTGGGTACTGGAGGGAGGGATACAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp TCCTGTATCCCTCCCTCCAGTACCCAGGCCCCTGTGAAGAGGTGCACTGTGGGTGGGTCAGACCTGACTTaGGGCCAGGCTCCGTATCCC +
Preference number: 4 (lower is better)
Translates to: SCIPPSSTQAPVKRCTVGGSDLT*GQAPYP
Trigger: GGGATACGGAGCCTGGCCGCAAGTCAGGTCTGACCC...ACCCACAGTGCACCTCTTCACAGGGGCCTGGGTACTGGAGGGAGGGATACAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp TGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCCCGGCCCTCGGAGGAGAACCATaGCACAACAGAACAGTCCCG +
Preference number: 4 (lower is better)
Translates to: CGKATGLGLRPVLLPFPALGGEP*HNRTVP
Trigger: CGGGACTGTTCTGTTGTGGCATGGTTCTCCTCCGAG...GGCCGGGAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp TGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGAACTGGGGTGGCCCATTaGCTCACTTCAGGACCTGCC +
Preference number: 4 (lower is better)
Translates to: CPLPSRFCLDNPQGLRQGTGVAH*LTSGPA
Trigger: GGCAGGTCCTGAAGTGAGGCAATGGGCCACCCCAGT...TCCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CCCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCAACTGGGGTGGCCCATTaGCTCACTTCAGGACCTGCC +
Preference number: 4 (lower is better)
Translates to: PCRHSPLCAAAFESGHQPTGVAH*LTSGPA
Trigger: GGCAGGTCCTGAAGTGAGGCAATGGGCCACCCCAGT...TGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTGGCAGGAAGGCCTCCTaGCCATGGAATCTGTCCTCG +
Preference number: 4 (lower is better)
Translates to: PRNTPQHPEPPRTESISLGRKAS*PWNLSS
Trigger: CGAGGACAGATTCCATGGGCAGGAGGCCTTCCTGCC...AAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp AGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCTCCCTCGGCAGGAAGGCCTCCTaGCCATGGAATCTGTCCTCG +
Preference number: 4 (lower is better)
Translates to: STQSPRGRNPSPFLYPSLGRKAS*PWNLSS
Trigger: CGAGGACAGATTCCATGGGCAGGAGGCCTTCCTGCC...GAGGGAGGGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp TCCTGTATCCCTCCCTCCAGTACCCAGGCCCCTGTGAAGAGGTGCACTGTGGGTCTACTCCCACGTCCCTaGTCTCCAGCCTTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SCIPPSSTQAPVKRCTVGLLPRP*SPALLG
Trigger: CCCCAGCAAGGCTGGAGAGCAGGGACGTGGGAGTAG...ACCCACAGTGCACCTCTTCACAGGGGCCTGGGTACTGGAGGGAGGGATACAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp GGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACCCTGCCTGGGTGACACCCAGGTaGCCTCACGGAGTATCCACG +
Preference number: 4 (lower is better)
Translates to: GILLCVQQPLRVGTSHPAWVTPR*PHGVST
Trigger: CGTGGATACTCCGTGAGGGCACCTGGGTGTCACCCA...GGCAGGGTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp GGCCCTTGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCACAAGCCACACCCTATaGCAGCCATGCCCAGCACCA +
Preference number: 4 (lower is better)
Translates to: GPCGKATGLGLRPVLLPFTSHTL*QPCPAP
Trigger: TGGTGCTGGGCATGGCTGGCATAGGGTGTGGCTTGT...GAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACAAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTGGGCCATCTCACAGCTaGAGAGCCCCACCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: PRNTPQHPEPPRTESISLGPSHS*RAPPPK
Trigger: CTTTGGAGGTGGGGCTCTGCAGCTGTGAGATGGCCC...AAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp GCTGCTGCCCACCCCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCCATCTCACAGCTaGAGAGCCCCACCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: AAAHPCRHSPLCAAAFESGPSHS*RAPPPK
Trigger: CTTTGGAGGTGGGGCTCTGCAGCTGTGAGATGGCCC...ACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGGGGTGGGCAGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp TTGAGGCAGGGAGTCCTGATAAGCCTGTCGCCTGACTGCACCCTCCTCTGTCCCGTCCCTGCCACTCCCTaGTGGGCCATCTCACAGCTG +
Preference number: 4 (lower is better)
Translates to: LRQGVLISLSPDCTLLCPVPATP*WAISQL
Trigger: CAGCTGTGAGATGGCCCAGCAGGGAGTGGCAGGGAC...GGGACAGAGGAGGGTGCAGTCAGGCGACAGGCTTATCAGGACTCCCTGCCTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp TTGAGGCAGGGAGTCCTGATAAGCCTGTCGCCTGACTGCACCCTCCTCTGTCCCAGCCTGTCGCCTGACTaGACCCTCCTCTGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: LRQGVLISLSPDCTLLCPSLSPD*TLLCPR
Trigger: CCTGGGACAGAGGAGGGTGCAGTCAGGCGACAGGCT...GGGACAGAGGAGGGTGCAGTCAGGCGACAGGCTTATCAGGACTCCCTGCCTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp TGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGACAACAGCTTGCCCGCTaGCCTCCAGGTTTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: CPLPSRFCLDNPQGLRQGQQLAR*PPGFAW
Trigger: CCAGGCAAAACCTGGAGGGCAGCGGGCAAGCTGTTG...TCCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CTGTCCCAGGGGGCCTGGATGCCAGGAGGAATATTCCTGAAGCCTCCCGTCCCTCAACAGCTTGCCCGCTaGCCTCCAGGTTTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: LSQGAWMPGGIFLKPPVPQQLAR*PPGFAW
Trigger: CCAGGCAAAACCTGGAGGGCAGCGGGCAAGCTGTTG...AGGGACGGGAGGCTTCAGGAATATTCCTCCTGGCATCCAGGCCCCCTGGGACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACTTCCCTTCCCGGCCCTaGCTGCCCCAATGGCCAATA +
Preference number: 4 (lower is better)
Translates to: PAGILLCVQQPLRVGTSHFPSRP*LPQWPI
Trigger: TATTGGCCATTGGGGCAGGCAGGGCCGGGAAGGGAA...GTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CAGCTCGGAGGAGAACCATGCCACAACAGAACAGTCCCGCAGCCTCCGATAACTCCGGAGCGGGCCGGCTaGAGGATAGGCCCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: QLGGEPCHNRTVPQPPITPERAG*RIGPCG
Trigger: TCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGG...AGTTATCGGAGGCTGCGGGACTGTTCTGTTGTGGCATGGTTCTCCTCCGAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR CCA 90 bp CAGAGCCTGGGTGATGACCCATTCTCCTGGCTGCCATCAGAAGCTGGGGACAAGCCACATCCCCATCCTTaGCGGCCACGAGTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: QSLGDDPFSWLPSEAGDKPHPHP*RPRVPA
Trigger: AGCGGGCACTCGTGGCCGCCAAGGATGGGGATGTGG...CTTGTCCCCAGCTTCTGATGGCAGCCAGGAGAATGGGTCATCACCCAGGCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR CCA 90 bp CCTTGGGCCCTAGTCAGCTGCGAGGGTCTCTCTGTTCCATCCAACAGCTTGCCCTCCTTCACCAGGAACTaGGCCAGGTGCAGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: PWALVSCEGLSVPSNSLPSFTRN*ARCRWP
Trigger: GGGCCACCTGCACCTGGCCCAGTTCCTGGTGAAGGA...GGGCAAGCTGTTGGATGGAACAGAGAGACCCTCGCAGCTGACTAGGGCCCAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR CCA 90 bp CCTTGGGCCCTAGTCAGCTGCGAGGGTCTCTCTGTTCCATCCAACAGCTTGCCCCAAAGTGCAGGGCCGTaGCCCCCTCATTGTCCCGTG +
Preference number: 4 (lower is better)
Translates to: PWALVSCEGLSVPSNSLPQSAGP*PPHCPV
Trigger: CACGGGACAATGAGGGGGCCACGGCCCTGCACTTTG...GGGCAAGCTGTTGGATGGAACAGAGAGACCCTCGCAGCTGACTAGGGCCCAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR CCA 90 bp CCCATTGCCTCACTTCAGGACCTGCCAAGGGGCTTCCTGGGTGCAGTGGTGAGACAAAGTGCAGGGCCGTaGCCCCCTCATTGTCCCGTG +
Preference number: 4 (lower is better)
Translates to: PIASLQDLPRGFLGAVVRQSAGP*PPHCPV
Trigger: CACGGGACAATGAGGGGGCCACGGCCCTGCACTTTG...TCTCACCACTGCACCCAGGAAGCCCCTTGGCAGGTCCTGAAGTGAGGCAATGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR CCA 90 bp CATCCAACAGCTTGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGAGAGGGGTCCACGTGGTaGGAGACTAGGGTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: HPTACPLPSRFCLDNPQGEGSTW*ETRVWQ
Trigger: CTGCCAGACCCTAGTCTCCCACCACGTGGACCCCTC...TCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCAAGCTGTTGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000343063.8
CDS-3UTR CCA 90 bp CATCCAACAGCTTGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATCCCTGGGAAGAGGCTaGTCAGGATGGCCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: HPTACPLPSRFCLDNPQGSLGRG*SGWPGQ
Trigger: CTGGCCTGGCCATCCTGACCAGCCTCTTCCCAGGGA...TCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCAAGCTGTTGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp TGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGACTCCCACCATTGTCCTaGGCCTCTGCGGAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: CPLPSRFCLDNPQGLRQGLPPLS*ASAELS
Trigger: AGAGAGCTCCGCAGAGGCCCAGGACAATGGTGGGAG...TCCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCTCCCACCATTGTCCTaGGCCTCTGCGGAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: PRNTPQHPEPPRTESISLLPPLS*ASAELS
Trigger: AGAGAGCTCCGCAGAGGCCCAGGACAATGGTGGGAG...AAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp TGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCCCGGCCCAAAGGGCCCCAGGATaGCCTGATGAGTCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: CGKATGLGLRPVLLPFPAQRAPG*PDESVS
Trigger: ACTCACAGACTCATCAGGCCATCCTGGGGCCCTTTG...GGCCGGGAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CCCATTGCCTCACTTCAGGACCTGCCAAGGGGCTTCCTGGGTGCAGTGGTGAGAGCCCGGGGCAGGAAGTaGCTGTTGACCGTGATGCTG +
Preference number: 4 (lower is better)
Translates to: PIASLQDLPRGFLGAVVRARGRK*LLTVML
Trigger: CAGCATCACGGTCAACAGCCACTTCCTGCCCCGGGC...TCTCACCACTGCACCCAGGAAGCCCCTTGGCAGGTCCTGAAGTGAGGCAATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR CCA 90 bp CCTAGTCAGCTGCGAGGGTCTCTCTGTTCCATCCAACAGCTTGCCCGCTGCCCTCAGGGGCCGGGTGGATaGCTTCTCATCCCCCTGTAC +
Preference number: 4 (lower is better)
Translates to: PSQLRGSLCSIQQLARCPQGPGG*LLIPLY
Trigger: GTACAGGGGGATGAGAAGCCATCCACCCGGCCCCTG...AGGGCAGCGGGCAAGCTGTTGGATGGAACAGAGAGACCCTCGCAGCTGACTAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CATCCAACAGCTTGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGACAGGGGCCGGGTGGATaGCTTCTCATCCCCCTGTAC +
Preference number: 4 (lower is better)
Translates to: HPTACPLPSRFCLDNPQGQGPGG*LLIPLY
Trigger: GTACAGGGGGATGAGAAGCCATCCACCCGGCCCCTG...TCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCAAGCTGTTGGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp GTCCTCGGAATCACTCCAGCTCCCCCAAATTCACAGATGGGAGGTGAAGGGGTGCTGTGTCGCCAGGCCTaGGCTCCCCTGAAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: VLGITPAPPNSQMGGEGVLCRQA*APLKPG
Trigger: GCCTGGCTTCAGGGGAGCCCAGGCCTGGCGACACAG...CACCCCTTCACCTCCCATCTGTGAATTTGGGGGAGCTGGAGTGATTCCGAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR CCA 90 bp TTGAGGCAGGGAGTCCTGATAAGCCTGTCGCCTGACTGCACCCTCCTCTGTCCCCAGTTGCCCAGCAGGTaGGTGATGGTGCTGCGCTGC +
Preference number: 4 (lower is better)
Translates to: LRQGVLISLSPDCTLLCPQLPSR*VMVLRC
Trigger: GCAGCGCAGCACCATCACCCACCTGCTGGGCAACTG...GGGACAGAGGAGGGTGCAGTCAGGCGACAGGCTTATCAGGACTCCCTGCCTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp TCTGAGTCCCAGCTCGGAGGAGAACCATGCCACAACAGAACAGTCCCGCAGCCTACAGCCTCCCAGCCGTaGGTGCCCAGGTGCTCGAAG +
Preference number: 4 (lower is better)
Translates to: SESQLGGEPCHNRTVPQPTASQP*VPRCSK
Trigger: CTTCGAGCACCTGGGCACCCACGGCTGGGAGGCTGT...AGGCTGCGGGACTGTTCTGTTGTGGCATGGTTCTCCTCCGAGCTGGGACTCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR CCA 90 bp GCTGCTGCCCACCCCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTAGGACAGGGGCCCCATaGGGAGCCTCCTTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: AAAHPCRHSPLCAAAFESRTGAP*GASFEE
Trigger: TTCCTCAAAGGAGGCTCCCCATGGGGCCCCTGTCCT...ACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGGGGTGGGCAGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACAGGACAGGGGCCCCATaGGGAGCCTCCTTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: PAGILLCVQQPLRVGTSHRTGAP*GASFEE
Trigger: TTCCTCAAAGGAGGCTCCCCATGGGGCCCCTGTCCT...GTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp TCTGAGTCCCAGCTCGGAGGAGAACCATGCCACAACAGAACAGTCCCGCAGCCTGCTCTCCAGCCTTGCTaGGGCCCACGACTAGGCCAG +
Preference number: 4 (lower is better)
Translates to: SESQLGGEPCHNRTVPQPALQPC*GPRLGQ
Trigger: CTGGCCTAGTCGTGGGCCCCAGCAAGGCTGGAGAGC...AGGCTGCGGGACTGTTCTGTTGTGGCATGGTTCTCCTCCGAGCTGGGACTCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR CCA 90 bp CCCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCAACCAGCCACCCTGCCTaGAGGACTCTCTCAGCCACT +
Preference number: 4 (lower is better)
Translates to: PCRHSPLCAAAFESGHQPTSHPA*RTLSAT
Trigger: AGTGGCTGAGAGAGTCCTCCAGGCAGGGTGGCTGGT...TGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CAGTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAAAGCCGCTGCCATCAGAAGCTaGGGACAAGCCACACCCTAT +
Preference number: 4 (lower is better)
Translates to: QWRKPERAGCRIGPCGKAAAIRS*GQATPY
Trigger: ATAGGGTGTGGCTTGTCCCCAGCTTCTGATGGCAGC...GGCTTTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CAGTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAAAGCCGATGACCCATTCTCCTaGCTGCCATCAGAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: QWRKPERAGCRIGPCGKADDPFS*LPSEAG
Trigger: CCCAGCTTCTGATGGCAGCCAGGAGAATGGGTCATC...GGCTTTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CCCATTGCCTCACTTCAGGACCTGCCAAGGGGCTTCCTGGGTGCAGTGGTGAGAGAGTGTCCGTCCCCTTaGGCCCTAGTCAGCTGCGAG +
Preference number: 4 (lower is better)
Translates to: PIASLQDLPRGFLGAVVRECPSP*ALVSCE
Trigger: CTCGCAGCTGACTAGGGCCCAAGGGGACGGACACTC...TCTCACCACTGCACCCAGGAAGCCCCTTGGCAGGTCCTGAAGTGAGGCAATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR CCA 90 bp CCTAGTCAGCTGCGAGGGTCTCTCTGTTCCATCCAACAGCTTGCCCGCTGCCCTCCCTGCCTGCCCCAATaGCCAATACCACCCCTCCCA +
Preference number: 4 (lower is better)
Translates to: PSQLRGSLCSIQQLARCPPCLPQ*PIPPLP
Trigger: TGGGAGGGGTGGTATTGGCCATTGGGGCAGGCAGGG...AGGGCAGCGGGCAAGCTGTTGGATGGAACAGAGAGACCCTCGCAGCTGACTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp TTGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGTTGTGGAAAAGCCACTaGCTTGGGGCTGCGGCCGGT +
Preference number: 4 (lower is better)
Translates to: LPAALQVLPGQSPGIEAGLWKSH*LGAAAG
Trigger: ACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACAA...CCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp TTGAGGCAGGGAGTCCTGATAAGCCTGTCGCCTGACTGCACCCTCCTCTGTCCCGAACGATCTGCGAGCTaGGAGCTGACCCCAGCCCAC +
Preference number: 4 (lower is better)
Translates to: LRQGVLISLSPDCTLLCPERSAS*ELTPAH
Trigger: GTGGGCTGGGGTCAGCTCCCAGCTCGCAGATCGTTC...GGGACAGAGGAGGGTGCAGTCAGGCGACAGGCTTATCAGGACTCCCTGCCTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409506.1
CDS-3UTR TCA 90 bp CCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACGGATGGGGGTACCCATaGGCAGGAGTCGGTCTAGAA +
Preference number: 4 (lower is better)
Translates to: PAGILLCVQQPLRVGTSHGWGYP*AGVGLE
Trigger: TTCTAGACCGACTCCTGCTCATGGGTACCCCCATCC...GTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR TCA 90 bp TGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGAGGATGGGGGTACCCATaGGCAGGAGTCGGTCTAGAA +
Preference number: 4 (lower is better)
Translates to: CPLPSRFCLDNPQGLRQGGWGYP*AGVGLE
Trigger: TTCTAGACCGACTCCTGCTCATGGGTACCCCCATCC...TCCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR TCA 90 bp TCCTGTATCCCTCCCTCCAGTACCCAGGCCCCTGTGAAGAGGTGCACTGTGGGTTCACTCTCATACTCCTaGCAGCGGCGCCGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: SCIPPSSTQAPVKRCTVGSLSYS*QRRRSC
Trigger: GCAGCTTCGGCGCCGCTGTCAGGAGTATGAGAGTGA...ACCCACAGTGCACCTCTTCACAGGGGCCTGGGTACTGGAGGGAGGGATACAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp TTGAGGCAGGGAGTCCTGATAAGCCTGTCGCCTGACTGCACCCTCCTCTGTCCCTCACTCTCATACTCCTaGCAGCGGCGCCGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: LRQGVLISLSPDCTLLCPSLSYS*QRRRSC
Trigger: GCAGCTTCGGCGCCGCTGTCAGGAGTATGAGAGTGA...GGGACAGAGGAGGGTGCAGTCAGGCGACAGGCTTATCAGGACTCCCTGCCTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp TGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCCCGGCCGGAAGTAACCCAGCATaGAGAGATCCAGTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: CGKATGLGLRPVLLPFPAGSNPA*RDPVRG
Trigger: GCCTCTCACTGGATCTCTTCATGCTGGGTTACTTCC...GGCCGGGAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp TCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCTCAAAGAAGCGGGCTTTaGTGTCCTCGAAGCCGTCGG +
Preference number: 4 (lower is better)
Translates to: SAAPRAPEDGIHLPSCIPQRSGL*CPRSRR
Trigger: CCGACGGCTTCGAGGACATCAAAGCCCGCTTCTTTG...AGGGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp CATCCAACAGCTTGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGAAGATGTCCTCACCGTTaGAGCTGCCCTGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: HPTACPLPSRFCLDNPQGRCPHR*SCPAGS
Trigger: GCTCCCAGCAGGGCAGCTTCAACGGTGAGGACATCT...TCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCAAGCTGTTGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp CCTTGGGCCCTAGTCAGCTGCGAGGGTCTCTCTGTTCCATCCAACAGCTTGCCCAGATGTCCTCACCGTTaGAGCTGCCCTGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: PWALVSCEGLSVPSNSLPRCPHR*SCPAGS
Trigger: GCTCCCAGCAGGGCAGCTTCAACGGTGAGGACATCT...GGGCAAGCTGTTGGATGGAACAGAGAGACCCTCGCAGCTGACTAGGGCCCAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp CCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGAGTCCGCCAAGGGAACTGGTaGCACTGGGGAAGGACAAGT +
Preference number: 4 (lower is better)
Translates to: PLPSRFCLDNPQGLRQGVRQGNW*HWGRTS
Trigger: ACTTGTCCTTCCCCAGTGTCACCAGTTCCCTTGGCG...GACTCCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp CTGTCCCAGGGGGCCTGGATGCCAGGAGGAATATTCCTGAAGCCTCCCGTCCCTCGCCAAGGGAACTGGTaGCACTGGGGAAGGACAAGT +
Preference number: 4 (lower is better)
Translates to: LSQGAWMPGGIFLKPPVPRQGNW*HWGRTS
Trigger: ACTTGTCCTTCCCCAGTGTCACCAGTTCCCTTGGCG...AGGGACGGGAGGCTTCAGGAATATTCCTCCTGGCATCCAGGCCCCCTGGGACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp CCCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACGCCAAGGGAACTGGTaGCACTGGGGAAGGACAAGT +
Preference number: 4 (lower is better)
Translates to: PCRHSPLCAAAFESGHQPRQGNW*HWGRTS
Trigger: ACTTGTCCTTCCCCAGTGTCACCAGTTCCCTTGGCG...TGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp CAGAGCCTGGGTGATGACCCATTCTCCTGGCTGCCATCAGAAGCTGGGGACAAGGTGTGCAGCAGCCTTTaGGAGTGGGCACCAGCCACC +
Preference number: 4 (lower is better)
Translates to: QSLGDDPFSWLPSEAGDKVCSSL*EWAPAT
Trigger: GGTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACAC...CTTGTCCCCAGCTTCTGATGGCAGCCAGGAGAATGGGTCATCACCCAGGCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp GGTGATGACCCATTCTCCTGGCTGCCATCAGAAGCTGGGGACAAGCCACACCCTGTACCCAGGCCCCTGTaGAGAGGTGCACTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: GDDPFSWLPSEAGDKPHPVPRPL*RGALWV
Trigger: CACCCACAGTGCACCTCTTCACAGGGGCCTGGGTAC...AGGGTGTGGCTTGTCCCCAGCTTCTGATGGCAGCCAGGAGAATGGGTCATCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CCCATTGCCTCACTTCAGGACCTGCCAAGGGGCTTCCTGGGTGCAGTGGTGAGATTCACGCTGCTGCCATaGGCGGCTGTCAGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: PIASLQDLPRGFLGAVVRFTLLP*AAVRSL
Trigger: CAAGCTCCTGACAGCCGCGCATGGCAGCAGCGTGAA...TCTCACCACTGCACCCAGGAAGCCCCTTGGCAGGTCCTGAAGTGAGGCAATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR GCA 90 bp CAGAGCCTGGGTGATGACCCATTCTCCTGGCTGCCATCAGAAGCTGGGGACAAGATTGTCCTGGGCCTCTaGGGAGCTCTCTGCGCCCAG +
Preference number: 4 (lower is better)
Translates to: QSLGDDPFSWLPSEAGDKIVLGL*GALCAQ
Trigger: CTGGGCGCAGAGAGCTCCGCAGAGGCCCAGGACAAT...CTTGTCCCCAGCTTCTGATGGCAGCCAGGAGAATGGGTCATCACCCAGGCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CTGCCCATGGAATCTGTCCTCGGAATCACTCCAGCTCCCCCAAATTCACAGATGTCGGGCAGCAGGGCCTaGAGCTCAGCCGCCAACCGG +
Preference number: 4 (lower is better)
Translates to: LPMESVLGITPAPPNSQMSGSRA*SSAANR
Trigger: CCGGTTGGCGGCTGAGCTGCAGGCCCTGCTGCCCGA...CATCTGTGAATTTGGGGGAGCTGGAGTGATTCCGAGGACAGATTCCATGGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR GCA 90 bp CCTTGGGCCCTAGTCAGCTGCGAGGGTCTCTCTGTTCCATCCAACAGCTTGCCCCCCTGTACTAGCCCATaGACGCCCTTCAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PWALVSCEGLSVPSNSLPPCTSP*TPFSSR
Trigger: CCTGCTGCTGAAGGGCGTGCATGGGCTAGTACAGGG...GGGCAAGCTGTTGGATGGAACAGAGAGACCCTCGCAGCTGACTAGGGCCCAAGG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CCTAGTCAGCTGCGAGGGTCTCTCTGTTCCATCCAACAGCTTGCCCGCTGCCCTCCCTGTACTAGCCCATaGACGCCCTTCAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PSQLRGSLCSIQQLARCPPCTSP*TPFSSR
Trigger: CCTGCTGCTGAAGGGCGTGCATGGGCTAGTACAGGG...AGGGCAGCGGGCAAGCTGTTGGATGGAACAGAGAGACCCTCGCAGCTGACTAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp GGCCCTTGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCCTCGGAGGAGAACCATaGCACAACAGAACAGTCCCG +
Preference number: 4 (lower is better)
Translates to: GPCGKATGLGLRPVLLPFLGGEP*HNRTVP
Trigger: CGGGACTGTTCTGTTGTGGCATGGTTCTCCTCCGAG...GAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACAAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CCTTGGGCCCTAGTCAGCTGCGAGGGTCTCTCTGTTCCATCCAACAGCTTGCCCCCTCACTTCAGGACCTaGCAAGGGGCTTCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: PWALVSCEGLSVPSNSLPPHFRT*QGASWV
Trigger: CACCCAGGAAGCCCCTTGGCAGGTCCTGAAGTGAGG...GGGCAAGCTGTTGGATGGAACAGAGAGACCCTCGCAGCTGACTAGGGCCCAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CCTTGGGCCCTAGTCAGCTGCGAGGGTCTCTCTGTTCCATCCAACAGCTTGCCCGGCAGGAAGGCCTCCTaGCCATGGAATCTGTCCTCG +
Preference number: 4 (lower is better)
Translates to: PWALVSCEGLSVPSNSLPGRKAS*PWNLSS
Trigger: CGAGGACAGATTCCATGGGCAGGAGGCCTTCCTGCC...GGGCAAGCTGTTGGATGGAACAGAGAGACCCTCGCAGCTGACTAGGGCCCAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp GTCCTCGGAATCACTCCAGCTCCCCCAAATTCACAGATGGGAGGTGAAGGGGTGCCTGCTCTCCAGCCTTaGTGGGGCCCACGACTAGGC +
Preference number: 4 (lower is better)
Translates to: VLGITPAPPNSQMGGEGVPALQP*WGPRLG
Trigger: GCCTAGTCGTGGGCCCCAGCAAGGCTGGAGAGCAGG...CACCCCTTCACCTCCCATCTGTGAATTTGGGGGAGCTGGAGTGATTCCGAGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR GCA 90 bp GGTGATGACCCATTCTCCTGGCTGCCATCAGAAGCTGGGGACAAGCCACACCCTCTACTCCCACGTCCCTaGTCTCCAGCCTTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GDDPFSWLPSEAGDKPHPLLPRP*SPALLG
Trigger: CCCCAGCAAGGCTGGAGAGCAGGGACGTGGGAGTAG...AGGGTGTGGCTTGTCCCCAGCTTCTGATGGCAGCCAGGAGAATGGGTCATCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp TCCTGTATCCCTCCCTCCAGTACCCAGGCCCCTGTGAAGAGGTGCACTGTGGGTGGGCCATCTCACAGCTaGAGAGCCCCACCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: SCIPPSSTQAPVKRCTVGGPSHS*RAPPPK
Trigger: CTTTGGAGGTGGGGCTCTGCAGCTGTGAGATGGCCC...ACCCACAGTGCACCTCTTCACAGGGGCCTGGGTACTGGAGGGAGGGATACAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CAGAGCCTGGGTGATGACCCATTCTCCTGGCTGCCATCAGAAGCTGGGGACAAGAGCCTGTCGCCTGACTaGACCCTCCTCTGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: QSLGDDPFSWLPSEAGDKSLSPD*TLLCPR
Trigger: CCTGGGACAGAGGAGGGTGCAGTCAGGCGACAGGCT...CTTGTCCCCAGCTTCTGATGGCAGCCAGGAGAATGGGTCATCACCCAGGCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp AGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCTCCCTCCTGCCCTCCAGGTTTTaGCTGGACAATCCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: STQSPRGRNPSPFLYPSLLPSRF*LDNPQG
Trigger: TCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAG...GAGGGAGGGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp TCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCTTGGGCCCTAGTCAGCTaGGAGGGTCTCTCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: SAAPRAPEDGIHLPSCIPWALVS*EGLSVP
Trigger: TGGAACAGAGAGACCCTCGCAGCTGACTAGGGCCCA...AGGGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp TTGAGGCAGGGAGTCCTGATAAGCCTGTCGCCTGACTGCACCCTCCTCTGTCCCTTCCCTTCCCGGCCCTaGCTGCCCCAATGGCCAATA +
Preference number: 4 (lower is better)
Translates to: LRQGVLISLSPDCTLLCPFPSRP*LPQWPI
Trigger: TATTGGCCATTGGGGCAGGCAGGGCCGGGAAGGGAA...GGGACAGAGGAGGGTGCAGTCAGGCGACAGGCTTATCAGGACTCCCTGCCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CAGCTCGGAGGAGAACCATGCCACAACAGAACAGTCCCGCAGCCTCCGATAACTGCAGGCCAGGTAGAGTaGGGAGGCGCCACTGCGTGT +
Preference number: 4 (lower is better)
Translates to: QLGGEPCHNRTVPQPPITAGQVE*GGATAC
Trigger: ACACGCAGTGGCGCCTCCCCACTCTACCTGGCCTGC...AGTTATCGGAGGCTGCGGGACTGTTCTGTTGTGGCATGGTTCTCCTCCGAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR CCA 90 bp CAGAGCCTGGGTGATGACCCATTCTCCTGGCTGCCATCAGAAGCTGGGGACAAGTCCCTGGGAAGAGGCTaGTCAGGATGGCCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: QSLGDDPFSWLPSEAGDKSLGRG*SGWPGQ
Trigger: CTGGCCTGGCCATCCTGACCAGCCTCTTCCCAGGGA...CTTGTCCCCAGCTTCTGATGGCAGCCAGGAGAATGGGTCATCACCCAGGCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp GGTGATGACCCATTCTCCTGGCTGCCATCAGAAGCTGGGGACAAGCCACACCCTCAGGGGCCGGGTGGATaGCTTCTCATCCCCCTGTAC +
Preference number: 4 (lower is better)
Translates to: GDDPFSWLPSEAGDKPHPQGPGG*LLIPLY
Trigger: GTACAGGGGGATGAGAAGCCATCCACCCGGCCCCTG...AGGGTGTGGCTTGTCCCCAGCTTCTGATGGCAGCCAGGAGAATGGGTCATCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp GTCCTCGGAATCACTCCAGCTCCCCCAAATTCACAGATGGGAGGTGAAGGGGTGCCTGCAGGGGCCGGGTaGATGGCTTCTCATCCCCCT +
Preference number: 4 (lower is better)
Translates to: VLGITPAPPNSQMGGEGVPAGAG*MASHPP
Trigger: AGGGGGATGAGAAGCCATCCACCCGGCCCCTGCAGG...CACCCCTTCACCTCCCATCTGTGAATTTGGGGGAGCTGGAGTGATTCCGAGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR CCA 90 bp TGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGAGTTGAAGCCACAGAGTaGGCCAGAGGCCGACTCGAA +
Preference number: 4 (lower is better)
Translates to: CPLPSRFCLDNPQGLRQGVEATE*ARGRLE
Trigger: TTCGAGTCGGCCTCTGGCCCACTCTGTGGCTTCAAC...TCCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGAGTCGTTGAAGCCACAGAGTaGGCCAGAGGCCGACTCGAA +
Preference number: 4 (lower is better)
Translates to: PLPSRFCLDNPQGLRQGVVEATE*ARGRLE
Trigger: TTCGAGTCGGCCTCTGGCCCACTCTGTGGCTTCAAC...GACTCCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACGTTGAAGCCACAGAGTaGGCCAGAGGCCGACTCGAA +
Preference number: 4 (lower is better)
Translates to: PAGILLCVQQPLRVGTSHVEATE*ARGRLE
Trigger: TTCGAGTCGGCCTCTGGCCCACTCTGTGGCTTCAAC...GTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp GTCCTCGGAATCACTCCAGCTCCCCCAAATTCACAGATGGGAGGTGAAGGGGTGACAGCCTCCCAGCCGTaGGTGCCCAGGTGCTCGAAG +
Preference number: 4 (lower is better)
Translates to: VLGITPAPPNSQMGGEGVTASQP*VPRCSK
Trigger: CTTCGAGCACCTGGGCACCCACGGCTGGGAGGCTGT...CACCCCTTCACCTCCCATCTGTGAATTTGGGGGAGCTGGAGTGATTCCGAGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR CCA 90 bp CCATGCCCAGCACCATGCCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGAGACTCACATGAAAGATaGATGTGGCCGAGGCCACCA +
Preference number: 4 (lower is better)
Translates to: PCPAPCPGILRSTQSPRGDSHER*MWPRPP
Trigger: TGGTGGCCTCGGCCACATCCATCTTTCATGTGAGTC...TCCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGGCATGGTGCTGGGCATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CCCATTGCCTCACTTCAGGACCTGCCAAGGGGCTTCCTGGGTGCAGTGGTGAGAAGGACAGGGGCCCCATaGGGAGCCTCCTTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: PIASLQDLPRGFLGAVVRRTGAP*GASFEE
Trigger: TTCCTCAAAGGAGGCTCCCCATGGGGCCCCTGTCCT...TCTCACCACTGCACCCAGGAAGCCCCTTGGCAGGTCCTGAAGTGAGGCAATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR CCA 90 bp GGTGATGACCCATTCTCCTGGCTGCCATCAGAAGCTGGGGACAAGCCACACCCTGAAAAGCCACTGGCTTaGGGCTGCGGCCGGTGCTAC +
Preference number: 4 (lower is better)
Translates to: GDDPFSWLPSEAGDKPHPEKPLA*GCGRCY
Trigger: GTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTC...AGGGTGTGGCTTGTCCCCAGCTTCTGATGGCAGCCAGGAGAATGGGTCATCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp TTGAGGCAGGGAGTCCTGATAAGCCTGTCGCCTGACTGCACCCTCCTCTGTCCCTTGTGGAAAAGCCACTaGCTTGGGGCTGCGGCCGGT +
Preference number: 4 (lower is better)
Translates to: LRQGVLISLSPDCTLLCPLWKSH*LGAAAG
Trigger: ACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACAA...GGGACAGAGGAGGGTGCAGTCAGGCGACAGGCTTATCAGGACTCCCTGCCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp CAGAGCCTGGGTGATGACCCATTCTCCTGGCTGCCATCAGAAGCTGGGGACAAGTCACTCTCATACTCCTaGCAGCGGCGCCGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: QSLGDDPFSWLPSEAGDKSLSYS*QRRRSC
Trigger: GCAGCTTCGGCGCCGCTGTCAGGAGTATGAGAGTGA...CTTGTCCCCAGCTTCTGATGGCAGCCAGGAGAATGGGTCATCACCCAGGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp CTGCCCATGGAATCTGTCCTCGGAATCACTCCAGCTCCCCCAAATTCACAGATGTGCGGCACCCGCCTCTaGTGGCACCTCCTCGCAGCT +
Preference number: 4 (lower is better)
Translates to: LPMESVLGITPAPPNSQMCGTRL*WHLLAA
Trigger: AGCTGCGAGGAGGTGCCATCAGAGGCGGGTGCCGCA...CATCTGTGAATTTGGGGGAGCTGGAGTGATTCCGAGGACAGATTCCATGGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR TCA 90 bp GGCCCTTGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCGGAAGTAACCCAGCATaGAGAGATCCAGTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: GPCGKATGLGLRPVLLPFGSNPA*RDPVRG
Trigger: GCCTCTCACTGGATCTCTTCATGCTGGGTTACTTCC...GAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACAAGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp TTGAGGCAGGGAGTCCTGATAAGCCTGTCGCCTGACTGCACCCTCCTCTGTCCCCAAAGAAGCGGGCTTTaGTGTCCTCGAAGCCGTCGG +
Preference number: 4 (lower is better)
Translates to: LRQGVLISLSPDCTLLCPQRSGL*CPRSRR
Trigger: CCGACGGCTTCGAGGACATCAAAGCCCGCTTCTTTG...GGGACAGAGGAGGGTGCAGTCAGGCGACAGGCTTATCAGGACTCCCTGCCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp CAGAGCCTGGGTGATGACCCATTCTCCTGGCTGCCATCAGAAGCTGGGGACAAGAGATGTCCTCACCGTTaGAGCTGCCCTGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: QSLGDDPFSWLPSEAGDKRCPHR*SCPAGS
Trigger: GCTCCCAGCAGGGCAGCTTCAACGGTGAGGACATCT...CTTGTCCCCAGCTTCTGATGGCAGCCAGGAGAATGGGTCATCACCCAGGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp CCTAGTCAGCTGCGAGGGTCTCTCTGTTCCATCCAACAGCTTGCCCGCTGCCCTCGCCAAGGGAACTGGTaGCACTGGGGAAGGACAAGT +
Preference number: 4 (lower is better)
Translates to: PSQLRGSLCSIQQLARCPRQGNW*HWGRTS
Trigger: ACTTGTCCTTCCCCAGTGTCACCAGTTCCCTTGGCG...AGGGCAGCGGGCAAGCTGTTGGATGGAACAGAGAGACCCTCGCAGCTGACTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp TCAGCAGTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAACACCTCAGACTCACATaGAAGATGGATGTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: SAVEEAGAGRLQDRPLWKHLRLT*KMDVAE
Trigger: CTCGGCCACATCCATCTTTCATGTGAGTCTGAGGTG...TTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCACTGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp GGTGATGACCCATTCTCCTGGCTGCCATCAGAAGCTGGGGACAAGCCACACCCTGATAAGCCTGTCGCCTaGCTGCACCCTCCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: GDDPFSWLPSEAGDKPHPDKPVA*LHPPLS
Trigger: GGACAGAGGAGGGTGCAGTCAGGCGACAGGCTTATC...AGGGTGTGGCTTGTCCCCAGCTTCTGATGGCAGCCAGGAGAATGGGTCATCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp CTGCCCATGGAATCTGTCCTCGGAATCACTCCAGCTCCCCCAAATTCACAGATGCAGGCCAGGCCGGGCTaGGGGACATGGCTCCTGAAC +
Preference number: 4 (lower is better)
Translates to: LPMESVLGITPAPPNSQMQARPG*GTWLLN
Trigger: GTTCAGGAGCCATGTCCCTCAGCCCGGCCTGGCCTG...CATCTGTGAATTTGGGGGAGCTGGAGTGATTCCGAGGACAGATTCCATGGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409506.1
CDS-3UTR GCA 90 bp CAGAGCCTGGGTGATGACCCATTCTCCTGGCTGCCATCAGAAGCTGGGGACAAGTGGCAGCACTCCATCTaGCCGTTCTCTGCTGCGTCG +
Preference number: 4 (lower is better)
Translates to: QSLGDDPFSWLPSEAGDKWQHSI*PFSAAS
Trigger: CGACGCAGCAGAGAACGGGCAGATGGAGTGCTGCCA...CTTGTCCCCAGCTTCTGATGGCAGCCAGGAGAATGGGTCATCACCCAGGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343063.8
CDS-3UTR GCA 90 bp CCCATTGCCTCACTTCAGGACCTGCCAAGGGGCTTCCTGGGTGCAGTGGTGAGAGTACTCCGCCAGGTCTaGCGCCGTGTAACCATCTTC +
Preference number: 4 (lower is better)
Translates to: PIASLQDLPRGFLGAVVRVLRQV*RRVTIF
Trigger: GAAGATGGTTACACGGCGGCAGACCTGGCGGAGTAC...TCTCACCACTGCACCCAGGAAGCCCCTTGGCAGGTCCTGAAGTGAGGCAATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343063.8
CDS-3UTR GCA 90 bp TCTGAGTCCCAGCTCGGAGGAGAACCATGCCACAACAGAACAGTCCCGCAGCCTCAGCGGCGCCGAAGCTaGAGGTCTGCAATCTGCTTC +
Preference number: 4 (lower is better)
Translates to: SESQLGGEPCHNRTVPQPQRRRS*RSAICF
Trigger: GAAGCAGATTGCAGACCTGCAGCTTCGGCGCCGCTG...AGGCTGCGGGACTGTTCTGTTGTGGCATGGTTCTCCTCCGAGCTGGGACTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR GCA 90 bp TCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCTCTCGGAGGAGAACCATaGCACAACAGAACAGTCCCG +
Preference number: 4 (lower is better)
Translates to: SAAPRAPEDGIHLPSCIPLGGEP*HNRTVP
Trigger: CGGGACTGTTCTGTTGTGGCATGGTTCTCCTCCGAG...AGGGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp GGTGATGACCCATTCTCCTGGCTGCCATCAGAAGCTGGGGACAAGCCACACCCTACTGGGGTGGCCCATTaGCTCACTTCAGGACCTGCC +
Preference number: 4 (lower is better)
Translates to: GDDPFSWLPSEAGDKPHPTGVAH*LTSGPA
Trigger: GGCAGGTCCTGAAGTGAGGCAATGGGCCACCCCAGT...AGGGTGTGGCTTGTCCCCAGCTTCTGATGGCAGCCAGGAGAATGGGTCATCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CAGAGCCTGGGTGATGACCCATTCTCCTGGCTGCCATCAGAAGCTGGGGACAAGTGGGTGACACCCAGGTaGCCTCACGGAGTATCCACG +
Preference number: 4 (lower is better)
Translates to: QSLGDDPFSWLPSEAGDKWVTPR*PHGVST
Trigger: CGTGGATACTCCGTGAGGGCACCTGGGTGTCACCCA...CTTGTCCCCAGCTTCTGATGGCAGCCAGGAGAATGGGTCATCACCCAGGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp GGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACCCTGCCACCCATTCTCCTGGCTaGCATCAGAAGCTGGGGACA +
Preference number: 4 (lower is better)
Translates to: GILLCVQQPLRVGTSHPATHSPG*HQKLGT
Trigger: TGTCCCCAGCTTCTGATGGCAGCCAGGAGAATGGGT...GGCAGGGTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CCCATTGCCTCACTTCAGGACCTGCCAAGGGGCTTCCTGGGTGCAGTGGTGAGACTGCCCTCCAGGTTTTaGCTGGACAATCCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: PIASLQDLPRGFLGAVVRLPSRF*LDNPQG
Trigger: TCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAG...TCTCACCACTGCACCCAGGAAGCCCCTTGGCAGGTCCTGAAGTGAGGCAATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR GCA 90 bp CCTAGTCAGCTGCGAGGGTCTCTCTGTTCCATCCAACAGCTTGCCCGCTGCCCTCTGCCCTCCAGGTTTTaGCTGGACAATCCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: PSQLRGSLCSIQQLARCPLPSRF*LDNPQG
Trigger: TCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAG...AGGGCAGCGGGCAAGCTGTTGGATGGAACAGAGAGACCCTCGCAGCTGACTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp TCCTGTATCCCTCCCTCCAGTACCCAGGCCCCTGTGAAGAGGTGCACTGTGGGTTGGGCCCTAGTCAGCTaGGAGGGTCTCTCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: SCIPPSSTQAPVKRCTVGWALVS*EGLSVP
Trigger: TGGAACAGAGAGACCCTCGCAGCTGACTAGGGCCCA...ACCCACAGTGCACCTCTTCACAGGGGCCTGGGTACTGGAGGGAGGGATACAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CTGCCCATGGAATCTGTCCTCGGAATCACTCCAGCTCCCCCAAATTCACAGATGCCCGGGTCTCTAGCGTaGCCGAGTGGCCCTCGTGGA +
Preference number: 4 (lower is better)
Translates to: LPMESVLGITPAPPNSQMPGSLA*PSGPRG
Trigger: TCCACGAGGGCCACTCGGCCACGCTAGAGACCCGGG...CATCTGTGAATTTGGGGGAGCTGGAGTGATTCCGAGGACAGATTCCATGGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR CCA 90 bp GTCCTCGGAATCACTCCAGCTCCCCCAAATTCACAGATGGGAGGTGAAGGGGTGTCCTTCACCAGGAACTaGGCCAGGTGCAGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: VLGITPAPPNSQMGGEGVSFTRN*ARCRWP
Trigger: GGGCCACCTGCACCTGGCCCAGTTCCTGGTGAAGGA...CACCCCTTCACCTCCCATCTGTGAATTTGGGGGAGCTGGAGTGATTCCGAGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR CCA 90 bp CTGCCCATGGAATCTGTCCTCGGAATCACTCCAGCTCCCCCAAATTCACAGATGCACTCTGGGATGGGCTaGCCGCGCTCATCCCGCGTG +
Preference number: 4 (lower is better)
Translates to: LPMESVLGITPAPPNSQMHSGMG*PRSSRV
Trigger: CACGCGGGATGAGCGCGGCCAGCCCATCCCAGAGTG...CATCTGTGAATTTGGGGGAGCTGGAGTGATTCCGAGGACAGATTCCATGGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR CCA 90 bp GGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACCCTGCCCAAAGGGCCCCAGGATaGCCTGATGAGTCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: GILLCVQQPLRVGTSHPAQRAPG*PDESVS
Trigger: ACTCACAGACTCATCAGGCCATCCTGGGGCCCTTTG...GGCAGGGTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CATCCAACAGCTTGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGAGTTGAAGCCACAGAGTaGGCCAGAGGCCGACTCGAA +
Preference number: 4 (lower is better)
Translates to: HPTACPLPSRFCLDNPQGVEATE*ARGRLE
Trigger: TTCGAGTCGGCCTCTGGCCCACTCTGTGGCTTCAAC...TCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCAAGCTGTTGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp TGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGAGCCGATCTCCTCCAGTaGCTGAGGAAGAGCATGATG +
Preference number: 4 (lower is better)
Translates to: CPLPSRFCLDNPQGLRQGADLLQ*LRKSMM
Trigger: CATCATGCTCTTCCTCAGCCACTGGAGGAGATCGGC...TCCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGAGTCGCCGATCTCCTCCAGTaGCTGAGGAAGAGCATGATG +
Preference number: 4 (lower is better)
Translates to: PLPSRFCLDNPQGLRQGVADLLQ*LRKSMM
Trigger: CATCATGCTCTTCCTCAGCCACTGGAGGAGATCGGC...GACTCCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CTGCCCATGGAATCTGTCCTCGGAATCACTCCAGCTCCCCCAAATTCACAGATGTTGAAGCTGCCCTGCTaGGAGCGGGACCCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: LPMESVLGITPAPPNSQMLKLPC*ERDPSR
Trigger: GCGGCTGGGGTCCCGCTCCCAGCAGGGCAGCTTCAA...CATCTGTGAATTTGGGGGAGCTGGAGTGATTCCGAGGACAGATTCCATGGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR CCA 90 bp GTCCTCGGAATCACTCCAGCTCCCCCAAATTCACAGATGGGAGGTGAAGGGGTGAGAGGTGCCCTGGACTaGGGTGGCCCATTGCCTCAC +
Preference number: 4 (lower is better)
Translates to: VLGITPAPPNSQMGGEGVRGALD*GGPLPH
Trigger: GTGAGGCAATGGGCCACCCCAGTCCAGGGCACCTCT...CACCCCTTCACCTCCCATCTGTGAATTTGGGGGAGCTGGAGTGATTCCGAGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR CCA 90 bp AGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCTCCCTCCATGAAAGATGGATGTaGCCGAGGCCACCAGCACCA +
Preference number: 4 (lower is better)
Translates to: STQSPRGRNPSPFLYPSLHERWM*PRPPAP
Trigger: TGGTGCTGGTGGCCTCGGCCACATCCATCTTTCATG...GAGGGAGGGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp GGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACCCTGCCCATGAAAGATGGATGTaGCCGAGGCCACCAGCACCA +
Preference number: 4 (lower is better)
Translates to: GILLCVQQPLRVGTSHPAHERWM*PRPPAP
Trigger: TGGTGCTGGTGGCCTCGGCCACATCCATCTTTCATG...GGCAGGGTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp TCTGAGTCCCAGCTCGGAGGAGAACCATGCCACAACAGAACAGTCCCGCAGCCTAGGACAGGGGCCCCATaGGGAGCCTCCTTTGAGGAA +
Preference number: 4 (lower is better)
Translates to: SESQLGGEPCHNRTVPQPRTGAP*GASFEE
Trigger: TTCCTCAAAGGAGGCTCCCCATGGGGCCCCTGTCCT...AGGCTGCGGGACTGTTCTGTTGTGGCATGGTTCTCCTCCGAGCTGGGACTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR CCA 90 bp CTGCCCATGGAATCTGTCCTCGGAATCACTCCAGCTCCCCCAAATTCACAGATGCAGGGCTGGTCAGGCTaGAGGACAGGGGCCCCATGG +
Preference number: 4 (lower is better)
Translates to: LPMESVLGITPAPPNSQMQGWSG*RTGAPW
Trigger: CCATGGGGCCCCTGTCCTCCAGCCTGACCAGCCCTG...CATCTGTGAATTTGGGGGAGCTGGAGTGATTCCGAGGACAGATTCCATGGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR CCA 90 bp CCCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCAGCTGCCATCAGAAGCTaGGGACAAGCCACACCCTAT +
Preference number: 4 (lower is better)
Translates to: PCRHSPLCAAAFESGHQPAAIRS*GQATPY
Trigger: ATAGGGTGTGGCTTGTCCCCAGCTTCTGATGGCAGC...TGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp GGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACCCTGCCGATGACCCATTCTCCTaGCTGCCATCAGAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GILLCVQQPLRVGTSHPADDPFS*LPSEAG
Trigger: CCCAGCTTCTGATGGCAGCCAGGAGAATGGGTCATC...GGCAGGGTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp TTGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGGATGACCCATTCTCCTaGCTGCCATCAGAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LPAALQVLPGQSPGIEAGDDPFS*LPSEAG
Trigger: CCCAGCTTCTGATGGCAGCCAGGAGAATGGGTCATC...CCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp CTGCCCATGGAATCTGTCCTCGGAATCACTCCAGCTCCCCCAAATTCACAGATGCGGCTGTCAGGAGCTTaGGGCAGGTCAGGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: LPMESVLGITPAPPNSQMRLSGA*GRSGPH
Trigger: GTGGGGACCTGACCTGCCTCAAGCTCCTGACAGCCG...CATCTGTGAATTTGGGGGAGCTGGAGTGATTCCGAGGACAGATTCCATGGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR TCA 90 bp ACTCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCGGAAGTAACCCAGCATaGAGAGATCCAGTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: TPQHPEPPRTESISLPVSGSNPA*RDPVRG
Trigger: GCCTCTCACTGGATCTCTTCATGCTGGGTTACTTCC...GGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp CCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACGGAAGTAACCCAGCATaGAGAGATCCAGTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: PAGILLCVQQPLRVGTSHGSNPA*RDPVRG
Trigger: GCCTCTCACTGGATCTCTTCATGCTGGGTTACTTCC...GTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp TCTGAGTCCCAGCTCGGAGGAGAACCATGCCACAACAGAACAGTCCCGCAGCCTCAAAGAAGCGGGCTTTaGTGTCCTCGAAGCCGTCGG +
Preference number: 4 (lower is better)
Translates to: SESQLGGEPCHNRTVPQPQRSGL*CPRSRR
Trigger: CCGACGGCTTCGAGGACATCAAAGCCCGCTTCTTTG...AGGCTGCGGGACTGTTCTGTTGTGGCATGGTTCTCCTCCGAGCTGGGACTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR TCA 90 bp CCCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACACCTCAGACTCACATaGAAGATGGATGTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: PCRHSPLCAAAFESGHQPHLRLT*KMDVAE
Trigger: CTCGGCCACATCCATCTTTCATGTGAGTCTGAGGTG...TGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp GTCCTCGGAATCACTCCAGCTCCCCCAAATTCACAGATGGGAGGTGAAGGGGTGCCCCTCATTGTCCCGTaGCGTGAGTCCGATGTCGGT +
Preference number: 4 (lower is better)
Translates to: VLGITPAPPNSQMGGEGVPLIVP*RESDVG
Trigger: ACCGACATCGGACTCACGGCACGGGACAATGAGGGG...CACCCCTTCACCTCCCATCTGTGAATTTGGGGGAGCTGGAGTGATTCCGAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR GCA 90 bp TCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCTCCGAAGCTGCAGGTCTaGAATCTGCTTCTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: SAAPRAPEDGIHLPSCIPPKLQV*NLLLQV
Trigger: TACCTGGAGAAGCAGATTGCAGACCTGCAGCTTCGG...AGGGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp GGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACCCTGCCCCGAAGCTGCAGGTCTaGAATCTGCTTCTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: GILLCVQQPLRVGTSHPAPKLQV*NLLLQV
Trigger: TACCTGGAGAAGCAGATTGCAGACCTGCAGCTTCGG...GGCAGGGTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CTGCCCATGGAATCTGTCCTCGGAATCACTCCAGCTCCCCCAAATTCACAGATGGTGATGGTGCTGCGCTaGTGCCACAGGTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: LPMESVLGITPAPPNSQMVMVLR*CHRWPS
Trigger: GCTGGGCCACCTGTGGCAGCAGCGCAGCACCATCAC...CATCTGTGAATTTGGGGGAGCTGGAGTGATTCCGAGGACAGATTCCATGGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR GCA 90 bp GTCCTCGGAATCACTCCAGCTCCCCCAAATTCACAGATGGGAGGTGAAGGGGTGTGGGTGACACCCAGGTaGCCTCACGGAGTATCCACG +
Preference number: 4 (lower is better)
Translates to: VLGITPAPPNSQMGGEGVWVTPR*PHGVST
Trigger: CGTGGATACTCCGTGAGGGCACCTGGGTGTCACCCA...CACCCCTTCACCTCCCATCTGTGAATTTGGGGGAGCTGGAGTGATTCCGAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR GCA 90 bp TCTGAGTCCCAGCTCGGAGGAGAACCATGCCACAACAGAACAGTCCCGCAGCCTACAAGCCACACCCTATaGCAGCCATGCCCAGCACCA +
Preference number: 4 (lower is better)
Translates to: SESQLGGEPCHNRTVPQPTSHTL*QPCPAP
Trigger: TGGTGCTGGGCATGGCTGGCATAGGGTGTGGCTTGT...AGGCTGCGGGACTGTTCTGTTGTGGCATGGTTCTCCTCCGAGCTGGGACTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR GCA 90 bp TCCTGTATCCCTCCCTCCAGTACCCAGGCCCCTGTGAAGAGGTGCACTGTGGGTACCCATTCTCCTGGCTaGCATCAGAAGCTGGGGACA +
Preference number: 4 (lower is better)
Translates to: SCIPPSSTQAPVKRCTVGTHSPG*HQKLGT
Trigger: TGTCCCCAGCTTCTGATGGCAGCCAGGAGAATGGGT...ACCCACAGTGCACCTCTTCACAGGGGCCTGGGTACTGGAGGGAGGGATACAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CAGAGCCTGGGTGATGACCCATTCTCCTGGCTGCCATCAGAAGCTGGGGACAAGTGGGCCCTAGTCAGCTaGGAGGGTCTCTCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: QSLGDDPFSWLPSEAGDKWALVS*EGLSVP
Trigger: TGGAACAGAGAGACCCTCGCAGCTGACTAGGGCCCA...CTTGTCCCCAGCTTCTGATGGCAGCCAGGAGAATGGGTCATCACCCAGGCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp TGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGACCCCAAATTCACAGATaGGAGGTGAAGGGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: CPLPSRFCLDNPQGLRQGPQIHR*EVKGCD
Trigger: GTCACACCCCTTCACCTCCCATCTGTGAATTTGGGG...TCCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCCCAAATTCACAGATaGGAGGTGAAGGGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: PRNTPQHPEPPRTESISLPQIHR*EVKGCD
Trigger: GTCACACCCCTTCACCTCCCATCTGTGAATTTGGGG...AAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CCCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCAAAGGCCTCCTGCCCATaGAATCTGTCCTCGGAATCA +
Preference number: 4 (lower is better)
Translates to: PCRHSPLCAAAFESGHQPKASCP*NLSSES
Trigger: TGATTCCGAGGACAGATTCCATGGGCAGGAGGCCTT...TGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp TCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCTAAGGCCTCCTGCCCATaGAATCTGTCCTCGGAATCA +
Preference number: 4 (lower is better)
Translates to: SAAPRAPEDGIHLPSCIPKASCP*NLSSES
Trigger: TGATTCCGAGGACAGATTCCATGGGCAGGAGGCCTT...AGGGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp AGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCTCCCTCAAGGCCTCCTGCCCATaGAATCTGTCCTCGGAATCA +
Preference number: 4 (lower is better)
Translates to: STQSPRGRNPSPFLYPSLKASCP*NLSSES
Trigger: TGATTCCGAGGACAGATTCCATGGGCAGGAGGCCTT...GAGGGAGGGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CAGCTCGGAGGAGAACCATGCCACAACAGAACAGTCCCGCAGCCTCCGATAACTACCAGCCACCCTGCCTaGAGGACTCTCTCAGCCACT +
Preference number: 4 (lower is better)
Translates to: QLGGEPCHNRTVPQPPITTSHPA*RTLSAT
Trigger: AGTGGCTGAGAGAGTCCTCCAGGCAGGGTGGCTGGT...AGTTATCGGAGGCTGCGGGACTGTTCTGTTGTGGCATGGTTCTCCTCCGAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR CCA 90 bp TTGAGGCAGGGAGTCCTGATAAGCCTGTCGCCTGACTGCACCCTCCTCTGTCCCGCTGCCATCAGAAGCTaGGGACAAGCCACACCCTAT +
Preference number: 4 (lower is better)
Translates to: LRQGVLISLSPDCTLLCPAAIRS*GQATPY
Trigger: ATAGGGTGTGGCTTGTCCCCAGCTTCTGATGGCAGC...GGGACAGAGGAGGGTGCAGTCAGGCGACAGGCTTATCAGGACTCCCTGCCTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CCCATTGCCTCACTTCAGGACCTGCCAAGGGGCTTCCTGGGTGCAGTGGTGAGAGCTGCCATCAGAAGCTaGGGACAAGCCACACCCTAT +
Preference number: 4 (lower is better)
Translates to: PIASLQDLPRGFLGAVVRAAIRS*GQATPY
Trigger: ATAGGGTGTGGCTTGTCCCCAGCTTCTGATGGCAGC...TCTCACCACTGCACCCAGGAAGCCCCTTGGCAGGTCCTGAAGTGAGGCAATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR TCA 90 bp CTGCCCATGGAATCTGTCCTCGGAATCACTCCAGCTCCCCCAAATTCACAGATGGGCCTGATGAGTCTGTaGGTACCTCCAGGCCGCCTG +
Preference number: 4 (lower is better)
Translates to: LPMESVLGITPAPPNSQMGLMSL*VPPGRL
Trigger: CAGGCGGCCTGGAGGTACTCACAGACTCATCAGGCC...CATCTGTGAATTTGGGGGAGCTGGAGTGATTCCGAGGACAGATTCCATGGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR TCA 90 bp CCTTGGGCCCTAGTCAGCTGCGAGGGTCTCTCTGTTCCATCCAACAGCTTGCCCCACCTCAGACTCACATaGAAGATGGATGTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: PWALVSCEGLSVPSNSLPHLRLT*KMDVAE
Trigger: CTCGGCCACATCCATCTTTCATGTGAGTCTGAGGTG...GGGCAAGCTGTTGGATGGAACAGAGAGACCCTCGCAGCTGACTAGGGCCCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp CCCATTGCCTCACTTCAGGACCTGCCAAGGGGCTTCCTGGGTGCAGTGGTGAGACACCTCAGACTCACATaGAAGATGGATGTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: PIASLQDLPRGFLGAVVRHLRLT*KMDVAE
Trigger: CTCGGCCACATCCATCTTTCATGTGAGTCTGAGGTG...TCTCACCACTGCACCCAGGAAGCCCCTTGGCAGGTCCTGAAGTGAGGCAATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR TCA 90 bp GGCCCTTGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCAATTTTACATCTTCTTaGGTGTCCGTCCCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: GPCGKATGLGLRPVLLPFNFTSS*VSVPLG
Trigger: GCCCAAGGGGACGGACACTCAAGAAGATGTAAAATT...GAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACAAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CATCCAACAGCTTGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGACCGAAGCTGCAGGTCTaGAATCTGCTTCTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: HPTACPLPSRFCLDNPQGPKLQV*NLLLQV
Trigger: TACCTGGAGAAGCAGATTGCAGACCTGCAGCTTCGG...TCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCAAGCTGTTGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp TCCTGTATCCCTCCCTCCAGTACCCAGGCCCCTGTGAAGAGGTGCACTGTGGGTCCGAAGCTGCAGGTCTaGAATCTGCTTCTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: SCIPPSSTQAPVKRCTVGPKLQV*NLLLQV
Trigger: TACCTGGAGAAGCAGATTGCAGACCTGCAGCTTCGG...ACCCACAGTGCACCTCTTCACAGGGGCCTGGGTACTGGAGGGAGGGATACAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp GTCCTCGGAATCACTCCAGCTCCCCCAAATTCACAGATGGGAGGTGAAGGGGTGACAAGCCACACCCTATaGCAGCCATGCCCAGCACCA +
Preference number: 4 (lower is better)
Translates to: VLGITPAPPNSQMGGEGVTSHTL*QPCPAP
Trigger: TGGTGCTGGGCATGGCTGGCATAGGGTGTGGCTTGT...CACCCCTTCACCTCCCATCTGTGAATTTGGGGGAGCTGGAGTGATTCCGAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR GCA 90 bp TCTGAGTCCCAGCTCGGAGGAGAACCATGCCACAACAGAACAGTCCCGCAGCCTACCCATTCTCCTGGCTaGCATCAGAAGCTGGGGACA +
Preference number: 4 (lower is better)
Translates to: SESQLGGEPCHNRTVPQPTHSPG*HQKLGT
Trigger: TGTCCCCAGCTTCTGATGGCAGCCAGGAGAATGGGT...AGGCTGCGGGACTGTTCTGTTGTGGCATGGTTCTCCTCCGAGCTGGGACTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR GCA 90 bp CTGCCCATGGAATCTGTCCTCGGAATCACTCCAGCTCCCCCAAATTCACAGATGGTCCCTGCCACTCCCTaGTGGGCCATCTCACAGCTG +
Preference number: 4 (lower is better)
Translates to: LPMESVLGITPAPPNSQMVPATP*WAISQL
Trigger: CAGCTGTGAGATGGCCCAGCAGGGAGTGGCAGGGAC...CATCTGTGAATTTGGGGGAGCTGGAGTGATTCCGAGGACAGATTCCATGGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR CCA 90 bp GGTGATGACCCATTCTCCTGGCTGCCATCAGAAGCTGGGGACAAGCCACACCCTCAAAGGGCCCCAGGATaGCCTGATGAGTCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: GDDPFSWLPSEAGDKPHPQRAPG*PDESVS
Trigger: ACTCACAGACTCATCAGGCCATCCTGGGGCCCTTTG...AGGGTGTGGCTTGTCCCCAGCTTCTGATGGCAGCCAGGAGAATGGGTCATCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CCTAGTCAGCTGCGAGGGTCTCTCTGTTCCATCCAACAGCTTGCCCGCTGCCCTGACTCACATGAAAGATaGATGTGGCCGAGGCCACCA +
Preference number: 4 (lower is better)
Translates to: PSQLRGSLCSIQQLARCPDSHER*MWPRPP
Trigger: TGGTGGCCTCGGCCACATCCATCTTTCATGTGAGTC...AGGGCAGCGGGCAAGCTGTTGGATGGAACAGAGAGACCCTCGCAGCTGACTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp TCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCTAATTTTACATCTTCTTaGGTGTCCGTCCCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: SAAPRAPEDGIHLPSCIPNFTSS*VSVPLG
Trigger: GCCCAAGGGGACGGACACTCAAGAAGATGTAAAATT...AGGGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp CCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTAATTTTACATCTTCTTaGGTGTCCGTCCCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: PRNTPQHPEPPRTESISLNFTSS*VSVPLG
Trigger: GCCCAAGGGGACGGACACTCAAGAAGATGTAAAATT...AAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp CCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACAATTTTACATCTTCTTaGGTGTCCGTCCCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: PAGILLCVQQPLRVGTSHNFTSS*VSVPLG
Trigger: GCCCAAGGGGACGGACACTCAAGAAGATGTAAAATT...GTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CTGCCCATGGAATCTGTCCTCGGAATCACTCCAGCTCCCCCAAATTCACAGATGCAGCGGCGCCGAAGCTaGAGGTCTGCAATCTGCTTC +
Preference number: 4 (lower is better)
Translates to: LPMESVLGITPAPPNSQMQRRRS*RSAICF
Trigger: GAAGCAGATTGCAGACCTGCAGCTTCGGCGCCGCTG...CATCTGTGAATTTGGGGGAGCTGGAGTGATTCCGAGGACAGATTCCATGGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR GCA 90 bp CTGCCCATGGAATCTGTCCTCGGAATCACTCCAGCTCCCCCAAATTCACAGATGGGCAGGAAGGCCTCCTaGCCATGGAATCTGTCCTCG +
Preference number: 4 (lower is better)
Translates to: LPMESVLGITPAPPNSQMGRKAS*PWNLSS
Trigger: CGAGGACAGATTCCATGGGCAGGAGGCCTTCCTGCC...CATCTGTGAATTTGGGGGAGCTGGAGTGATTCCGAGGACAGATTCCATGGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR GCA 90 bp CTGCCCATGGAATCTGTCCTCGGAATCACTCCAGCTCCCCCAAATTCACAGATGTTCCCTTCCCGGCCCTaGCTGCCCCAATGGCCAATA +
Preference number: 4 (lower is better)
Translates to: LPMESVLGITPAPPNSQMFPSRP*LPQWPI
Trigger: TATTGGCCATTGGGGCAGGCAGGGCCGGGAAGGGAA...CATCTGTGAATTTGGGGGAGCTGGAGTGATTCCGAGGACAGATTCCATGGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR CCA 90 bp GTCCTCGGAATCACTCCAGCTCCCCCAAATTCACAGATGGGAGGTGAAGGGGTGGCCGATCTCCTCCAGTaGCTGAGGAAGAGCATGATG +
Preference number: 4 (lower is better)
Translates to: VLGITPAPPNSQMGGEGVADLLQ*LRKSMM
Trigger: CATCATGCTCTTCCTCAGCCACTGGAGGAGATCGGC...CACCCCTTCACCTCCCATCTGTGAATTTGGGGGAGCTGGAGTGATTCCGAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR CCA 90 bp CAGCTCGGAGGAGAACCATGCCACAACAGAACAGTCCCGCAGCCTCCGATAACTCATGAAAGATGGATGTaGCCGAGGCCACCAGCACCA +
Preference number: 4 (lower is better)
Translates to: QLGGEPCHNRTVPQPPITHERWM*PRPPAP
Trigger: TGGTGCTGGTGGCCTCGGCCACATCCATCTTTCATG...AGTTATCGGAGGCTGCGGGACTGTTCTGTTGTGGCATGGTTCTCCTCCGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR CCA 90 bp CAGAGCCTGGGTGATGACCCATTCTCCTGGCTGCCATCAGAAGCTGGGGACAAGGACTCACATGAAAGATaGATGTGGCCGAGGCCACCA +
Preference number: 4 (lower is better)
Translates to: QSLGDDPFSWLPSEAGDKDSHER*MWPRPP
Trigger: TGGTGGCCTCGGCCACATCCATCTTTCATGTGAGTC...CTTGTCCCCAGCTTCTGATGGCAGCCAGGAGAATGGGTCATCACCCAGGCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp TCTGAGTCCCAGCTCGGAGGAGAACCATGCCACAACAGAACAGTCCCGCAGCCTCCCCAAATTCACAGATaGGAGGTGAAGGGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: SESQLGGEPCHNRTVPQPPQIHR*EVKGCD
Trigger: GTCACACCCCTTCACCTCCCATCTGTGAATTTGGGG...AGGCTGCGGGACTGTTCTGTTGTGGCATGGTTCTCCTCCGAGCTGGGACTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR CCA 90 bp CAGAGCCTGGGTGATGACCCATTCTCCTGGCTGCCATCAGAAGCTGGGGACAAGCCCCAAATTCACAGATaGGAGGTGAAGGGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: QSLGDDPFSWLPSEAGDKPQIHR*EVKGCD
Trigger: GTCACACCCCTTCACCTCCCATCTGTGAATTTGGGG...CTTGTCCCCAGCTTCTGATGGCAGCCAGGAGAATGGGTCATCACCCAGGCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CCA 90 bp CAGCTCGGAGGAGAACCATGCCACAACAGAACAGTCCCGCAGCCTCCGATAACTGACTCACATGAAAGATaGATGTGGCCGAGGCCACCA +
Preference number: 4 (lower is better)
Translates to: QLGGEPCHNRTVPQPPITDSHER*MWPRPP
Trigger: TGGTGGCCTCGGCCACATCCATCTTTCATGTGAGTC...AGTTATCGGAGGCTGCGGGACTGTTCTGTTGTGGCATGGTTCTCCTCCGAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR TCA 90 bp CCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACGTCATTCTCCAAAGTTaGACATCTCAGCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: PAGILLCVQQPLRVGTSHVILQS*TSQLPS
Trigger: AGAAGGAAGCTGAGATGTTCAACTTTGGAGAATGAC...GTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR GCA 90 bp CTGCCCATGGAATCTGTCCTCGGAATCACTCCAGCTCCCCCAAATTCACAGATGACCCATTCTCCTGGCTaGCATCAGAAGCTGGGGACA +
Preference number: 4 (lower is better)
Translates to: LPMESVLGITPAPPNSQMTHSPG*HQKLGT
Trigger: TGTCCCCAGCTTCTGATGGCAGCCAGGAGAATGGGT...CATCTGTGAATTTGGGGGAGCTGGAGTGATTCCGAGGACAGATTCCATGGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR CCA 90 bp CTGCCCATGGAATCTGTCCTCGGAATCACTCCAGCTCCCCCAAATTCACAGATGGACTCATGCACAGGCTaGGGCTTCCTGTTTCAGACG +
Preference number: 4 (lower is better)
Translates to: LPMESVLGITPAPPNSQMDSCTG*GFLFQT
Trigger: CGTCTGAAACAGGAAGCCCCAGCCTGTGCATGAGTC...CATCTGTGAATTTGGGGGAGCTGGAGTGATTCCGAGGACAGATTCCATGGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343063.8
CDS-3UTR CCA 90 bp CTGCCCATGGAATCTGTCCTCGGAATCACTCCAGCTCCCCCAAATTCACAGATGGCCGATCTCCTCCAGTaGCTGAGGAAGAGCATGATG +
Preference number: 4 (lower is better)
Translates to: LPMESVLGITPAPPNSQMADLLQ*LRKSMM
Trigger: CATCATGCTCTTCCTCAGCCACTGGAGGAGATCGGC...CATCTGTGAATTTGGGGGAGCTGGAGTGATTCCGAGGACAGATTCCATGGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR CCA 90 bp CTGCCCATGGAATCTGTCCTCGGAATCACTCCAGCTCCCCCAAATTCACAGATGCATGAAAGATGGATGTaGCCGAGGCCACCAGCACCA +
Preference number: 4 (lower is better)
Translates to: LPMESVLGITPAPPNSQMHERWM*PRPPAP
Trigger: TGGTGCTGGTGGCCTCGGCCACATCCATCTTTCATG...CATCTGTGAATTTGGGGGAGCTGGAGTGATTCCGAGGACAGATTCCATGGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR TCA 90 bp TTGAGGCAGGGAGTCCTGATAAGCCTGTCGCCTGACTGCACCCTCCTCTGTCCCGTCATTCTCCAAAGTTaGACATCTCAGCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LRQGVLISLSPDCTLLCPVILQS*TSQLPS
Trigger: AGAAGGAAGCTGAGATGTTCAACTTTGGAGAATGAC...GGGACAGAGGAGGGTGCAGTCAGGCGACAGGCTTATCAGGACTCCCTGCCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp GGTGATGACCCATTCTCCTGGCTGCCATCAGAAGCTGGGGACAAGCCACACCCTGTCATTCTCCAAAGTTaGACATCTCAGCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GDDPFSWLPSEAGDKPHPVILQS*TSQLPS
Trigger: AGAAGGAAGCTGAGATGTTCAACTTTGGAGAATGAC...AGGGTGTGGCTTGTCCCCAGCTTCTGATGGCAGCCAGGAGAATGGGTCATCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR TCA 90 bp CTGCCCATGGAATCTGTCCTCGGAATCACTCCAGCTCCCCCAAATTCACAGATGGTCATTCTCCAAAGTTaGACATCTCAGCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LPMESVLGITPAPPNSQMVILQS*TSQLPS
Trigger: AGAAGGAAGCTGAGATGTTCAACTTTGGAGAATGAC...CATCTGTGAATTTGGGGGAGCTGGAGTGATTCCGAGGACAGATTCCATGGGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS CCA 90 bp ACAGCTCGGCCAGGCTGCCCGTGGCAGCGGCGTCATGCGCTGGGGTaGCCCCGTTGTGGGCCCGCTGGTTGCCGGGCAGCTGGGCCCGCT +
Preference number: 5 (lower is better)
Translates to: TARPGCPWQRRHALG*PRCGPAGCRAAGPA
Trigger: AGCGGGCCCAGCTGCCCGGCAACCAGCGGGCCCACAACGGGGCCACCCCAGCGCATGACGCCGCTGCCACGGGCAGCCTGGCCGAGCTGT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS CCA 90 bp CCAGCACAGCTCGGCCAGGCTGCCCGTGGCAGCGGCGTCATGCGCTaGGGTGGCCCCGTTGTGGGCCCGCTGGTTGCCGGGCAGCTGGGC +
Preference number: 5 (lower is better)
Translates to: PAQLGQAARGSGVMR*GGPVVGPLVAGQLG
Trigger: GCCCAGCTGCCCGGCAACCAGCGGGCCCACAACGGGGCCACCCCAGCGCATGACGCCGCTGCCACGGGCAGCCTGGCCGAGCTGTGCTGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS CCA 90 bp GGTGGCCCAGGGCTCCTGGCGGCCTCCTGGCCCCGCAACCCCGCGTaGCGGGCTCCTAGGGTCCTGCAGGCCACTGTCTTGAGGGCCGGC +
Preference number: 5 (lower is better)
Translates to: GGPGLLAASWPRNPA*RAPRVLQATVLRAG
Trigger: GCCGGCCCTCAAGACAGTGGCCTGCAGGACCCTAGGAGCCCGCCACGCGGGGTTGCGGGGCCAGGAGGCCGCCAGGAGCCCTGGGCCACC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000477241.1
ENST00000612395.1
CDS CCA 90 bp GTCCAGGCCCGGCGGCCGGCGGCCACCTCGTCGGTCACGGCCTTGTaGAAGGCGCGCACAGCCTCCCAGCCGTGGGTGCCCAGGTGCTCG +
Preference number: 5 (lower is better)
Translates to: VQARRPAATSSVTAL*KARTASQPWVPRCS
Trigger: CGAGCACCTGGGCACCCACGGCTGGGAGGCTGTGCGCGCCTTCCACAAGGCCGTGACCGACGAGGTGGCCGCCGGCCGCCGGGCCTGGAC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000477241.1
ENST00000612395.1
CDS TCA 90 bp CAGCCCGGGTGGCGTGGTGAACCAGGCCGGCCCCCAGAGCATCGGTaGTGCCCGGGCCCAGGGCGCCAGCCTCCAGCAGCCGCTCCAACG +
Preference number: 5 (lower is better)
Translates to: QPGWRGEPGRPPEHR*CPGPGRQPPAAAPT
Trigger: CGTTGGAGCGGCTGCTGGAGGCTGGCGCCCTGGGCCCGGGCATCACCGATGCTCTGGGGGCCGGCCTGGTTCACCACGCCACCCGGGCTG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS GCA 90 bp ACCAGCCAGCACAGCTCGGCCAGGCTGCCCGTGGCAGCGGCGTCATaGGCTGGGGTGGCCCCGTTGTGGGCCCGCTGGTTGCCGGGCAGC +
Preference number: 5 (lower is better)
Translates to: TSQHSSARLPVAAAS*AGVAPLWARWLPGS
Trigger: GCTGCCCGGCAACCAGCGGGCCCACAACGGGGCCACCCCAGCGCATGACGCCGCTGCCACGGGCAGCCTGGCCGAGCTGTGCTGGCTGGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS TCA 90 bp GCAGGGGACGGCGGCGTGAGGCAGGGGCCCGAGCAGGGTCAGACCTaGCTTGCGGCCAGGCTCCGTATCCCAGGCGGGACGCTGGCTGGA +
Preference number: 5 (lower is better)
Translates to: AGDGGVRQGPEQGQT*LAARLRIPGGTLAG
Trigger: TCCAGCCAGCGTCCCGCCTGGGATACGGAGCCTGGCCGCAAGTCAGGTCTGACCCTGCTCGGGCCCCTGCCTCACGCCGCCGTCCCCTGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000477241.1
ENST00000612395.1
CDS GCA 90 bp GTGGCCCCGTTGTGGGCCCGCTGGTTGCCGGGCAGCTGGGCCCGCTaGACCAAGAACTTGACGCAGTCCAGGTGGCCAGCCCGGGTGGCG +
Preference number: 5 (lower is better)
Translates to: VAPLWARWLPGSWAR*TKNLTQSRWPARVA
Trigger: CGCCACCCGGGCTGGCCACCTGGACTGCGTCAAGTTCTTGGTGCAGCGGGCCCAGCTGCCCGGCAACCAGCGGGCCCACAACGGGGCCAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS CCA 90 bp CGGCAGCGTGGTGCAGCGGCCGGGCTCCCTCCCGGGTCTCTAGCGTaGCCGAGTGGCCCTCGTGGAGCAGCCACTCCACCAGCACTGGGT +
Preference number: 5 (lower is better)
Translates to: RQRGAAAGLPPGSLA*PSGPRGAATPPALG
Trigger: ACCCAGTGCTGGTGGAGTGGCTGCTCCACGAGGGCCACTCGGCCACGCTAGAGACCCGGGAGGGAGCCCGGCCGCTGCACCACGCTGCCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS GCA 90 bp GGACGGCGGCGTGAGGCAGGGGCCCGAGCAGGGTCAGACCTGACTTaGGGCCAGGCTCCGTATCCCAGGCGGGACGCTGGCTGGAGCCAA +
Preference number: 5 (lower is better)
Translates to: GRRREAGARAGSDLT*GQAPYPRRDAGWSQ
Trigger: TTGGCTCCAGCCAGCGTCCCGCCTGGGATACGGAGCCTGGCCGCAAGTCAGGTCTGACCCTGCTCGGGCCCCTGCCTCACGCCGCCGTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000477241.1
ENST00000612395.1
CDS CCA 90 bp GGCCGGGCTCCCTCCCGGGTCTCTAGCGTGGCCGAGTGGCCCTCGTaGAGCAGCCACTCCACCAGCACTGGGTGTCCAAAACGGGCGGCC +
Preference number: 5 (lower is better)
Translates to: GRAPSRVSSVAEWPS*SSHSTSTGCPKRAA
Trigger: GGCCGCCCGTTTTGGACACCCAGTGCTGGTGGAGTGGCTGCTCCACGAGGGCCACTCGGCCACGCTAGAGACCCGGGAGGGAGCCCGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS CCA 90 bp GGCGTCATCAGCAGGGGCACCGGCTGGGCCACCTCCCGCAGGTACTaGGCGCAGTCCCGGTGTCCATGGTACTCCGCCAGGTCTGCCGCC +
Preference number: 5 (lower is better)
Translates to: GVISRGTGWATSRRY*AQSRCPWYSARSAA
Trigger: GGCGGCAGACCTGGCGGAGTACCATGGACACCGGGACTGCGCCCAGTACCTGCGGGAGGTGGCCCAGCCGGTGCCCCTGCTGATGACGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343063.8
CDS TCA 90 bp CTTGCGCAGGCTGGCCAGGTCTGGGCCGGCTGCGGCACCCGCCTCTaGTGGCACCTCCTCGCAGCTGATGCCAGAGTCGCTGGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: LAQAGQVWAGCGTRL*WHLLAADARVAGLL
Trigger: GAGGAGGCCAGCGACTCTGGCATCAGCTGCGAGGAGGTGCCATCAGAGGCGGGTGCCGCAGCCGGCCCAGACCTGGCCAGCCTGCGCAAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000477241.1
ENST00000612395.1
CDS CCA 90 bp CGCCAGCCTCCAGCAGCCGCTCCAACGTCGCCACATCCCCATCCTTaGCGGCCACGAGTGCCCGCTGCTTCTCCATCCTCTGGCCCGGGC +
Preference number: 5 (lower is better)
Translates to: RQPPAAAPTSPHPHP*RPRVPAASPSSGPG
Trigger: GCCCGGGCCAGAGGATGGAGAAGCAGCGGGCACTCGTGGCCGCCAAGGATGGGGATGTGGCGACGTTGGAGCGGCTGCTGGAGGCTGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343063.8
CDS TCA 90 bp ACCAAGAACTTGACGCAGTCCAGGTGGCCAGCCCGGGTGGCGTGGTaGACCAGGCCGGCCCCCAGAGCATCGGTGATGCCCGGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: TKNLTQSRWPARVAW*TRPAPRASVMPGPR
Trigger: CCTGGGCCCGGGCATCACCGATGCTCTGGGGGCCGGCCTGGTTCACCACGCCACCCGGGCTGGCCACCTGGACTGCGTCAAGTTCTTGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR CAA 90 bp GCCATGCCCAGCACCATGCCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGGCCACATCCCCATCCTaGGCGGCCACGAGTGCCCGC +
Preference number: 5 (lower is better)
Translates to: AMPSTMPRNTPQHPEPPRATSPS*AATSAR
Trigger: GCGGGCACTCGTGGCCGCCAAGGATGGGGATGTGGC...CCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGGCATGGTGCTGGGCATGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR CAA 90 bp GGCCCTTGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCTTGTGGGCCCGCTGGTaGCCGGGCAGCTGGGCCCGC +
Preference number: 5 (lower is better)
Translates to: GPCGKATGLGLRPVLLPFLWARW*PGSWAR
Trigger: GCGGGCCCAGCTGCCCGGCAACCAGCGGGCCCACAA...GAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACAAGGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS GCA 90 bp CAGCCGCTCCAACGTCGCCACATCCCCATCCTTGGCGGCCACGAGTaGCCGCTGCTTCTCCATCCTCTGGCCCGGGCTCTCAGTGGCGAC +
Preference number: 5 (lower is better)
Translates to: QPLQRRHIPILGGHE*PLLLHPLARALSGD
Trigger: GTCGCCACTGAGAGCCCGGGCCAGAGGATGGAGAAGCAGCGGGCACTCGTGGCCGCCAAGGATGGGGATGTGGCGACGTTGGAGCGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343063.8
CDS GCA 90 bp GCCTTGTGGAAGGCGCGCACAGCCTCCCAGCCGTGGGTGCCCAGGTaGTCGAAGACCTCGAAGCACAGCAGGTGGCGCAGCTTCCGCTCC +
Preference number: 5 (lower is better)
Translates to: ALWKARTASQPWVPR*SKTSKHSRWRSFRS
Trigger: GGAGCGGAAGCTGCGCCACCTGCTGTGCTTCGAGGTCTTCGAGCACCTGGGCACCCACGGCTGGGAGGCTGTGCGCGCCTTCCACAAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000477241.1
ENST00000612395.1
CDS GCA 90 bp CGGTCACGGCCTTGTGGAAGGCGCGCACAGCCTCCCAGCCGTGGGTaGCCAGGTGCTCGAAGACCTCGAAGCACAGCAGGTGGCGCAGCT +
Preference number: 5 (lower is better)
Translates to: RSRPCGRRAQPPSRG*PGARRPRSTAGGAA
Trigger: AGCTGCGCCACCTGCTGTGCTTCGAGGTCTTCGAGCACCTGGGCACCCACGGCTGGGAGGCTGTGCGCGCCTTCCACAAGGCCGTGACCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000477241.1
ENST00000612395.1
CDS CCA 90 bp ATTGAGGCCTCCTCAACCTCCAGTCCGGGCGCCCGGGGCAGGAAGTaGCTGTTGACCGTGATGCTGACCAGGGGCTCGGGCAGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: IEASSTSSPGARGRK*LLTVMLTRGSGSRA
Trigger: GGCCCTGCTGCCCGAGCCCCTGGTCAGCATCACGGTCAACAGCCACTTCCTGCCCCGGGCGCCCGGACTGGAGGTTGAGGAGGCCTCAAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000477241.1
ENST00000612395.1
CDS CCA 90 bp TCGTCGGTCACGGCCTTGTGGAAGGCGCGCACAGCCTCCCAGCCGTaGGTGCCCAGGTGCTCGAAGACCTCGAAGCACAGCAGGTGGCGC +
Preference number: 5 (lower is better)
Translates to: SSVTALWKARTASQP*VPRCSKTSKHSRWR
Trigger: GCGCCACCTGCTGTGCTTCGAGGTCTTCGAGCACCTGGGCACCCACGGCTGGGAGGCTGTGCGCGCCTTCCACAAGGCCGTGACCGACGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000477241.1
ENST00000612395.1
CDS-3UTR CAA 90 bp GCTGCTGCCCACCCCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGCTGGGGTGGCCCCGTaGTGGGCCCGCTGGTTGCCG +
Preference number: 5 (lower is better)
Translates to: AAAHPCRHSPLCAAAFESAGVAP*WARWLP
Trigger: CGGCAACCAGCGGGCCCACAACGGGGCCACCCCAGC...ACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGGGGTGGGCAGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR CAA 90 bp TTGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGGCTGGGGTGGCCCCGTaGTGGGCCCGCTGGTTGCCG +
Preference number: 5 (lower is better)
Translates to: LPAALQVLPGQSPGIEAGAGVAP*WARWLP
Trigger: CGGCAACCAGCGGGCCCACAACGGGGCCACCCCAGC...CCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS GCA 90 bp AGCAGCCACTCCACCAGCACTGGGTGTCCAAAACGGGCGGCCAGGTaGAGCGGGGAGACGCCCGAGGCATCTTGGTCCTGCAGACCGCAG +
Preference number: 5 (lower is better)
Translates to: SSHSTSTGCPKRAAR*SGETPEASWSCRPQ
Trigger: CTGCGGTCTGCAGGACCAAGATGCCTCGGGCGTCTCCCCGCTGCACCTGGCCGCCCGTTTTGGACACCCAGTGCTGGTGGAGTGGCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS GCA 90 bp GCGGCGGCAGCGTGCAGGGCGCTCATGCCATCGAGAGCACGAAGGTaGACGTCAGCGCCACAGTCCTTCACCAGGAACTGGGCCAGGTGC +
Preference number: 5 (lower is better)
Translates to: AAAACRALMPSRARR*TSAPQSFTRNWARC
Trigger: GCACCTGGCCCAGTTCCTGGTGAAGGACTGTGGCGCTGACGTGCACCTTCGTGCTCTCGATGGCATGAGCGCCCTGCACGCTGCCGCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS GCA 90 bp CGAGGGAGTAGTGGCCACGGGCGGCGGCAGCGTGCAGGGCGCTCATaGCATCGAGAGCACGAAGGTGCACGTCAGCGCCACAGTCCTTCA +
Preference number: 5 (lower is better)
Translates to: RGSSGHGRRQRAGRS*HREHEGARQRHSPS
Trigger: TGAAGGACTGTGGCGCTGACGTGCACCTTCGTGCTCTCGATGGCATGAGCGCCCTGCACGCTGCCGCCGCCCGTGGCCACTACTCCCTCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS CCA 90 bp TCCCCATCCTTGGCGGCCACGAGTGCCCGCTGCTTCTCCATCCTCTaGCCCGGGCTCTCAGTGGCGACTCATGCACAGGCTGGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: SPSLAATSARCFSIL*PGLSVATHAQAGAS
Trigger: GGAAGCCCCAGCCTGTGCATGAGTCGCCACTGAGAGCCCGGGCCAGAGGATGGAGAAGCAGCGGGCACTCGTGGCCGCCAAGGATGGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343063.8
CDS-3UTR CAA 90 bp CAGTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAAAGCCGACGCCCGAGGCATCTaGGTCCTGCAGACCGCAGCC +
Preference number: 5 (lower is better)
Translates to: QWRKPERAGCRIGPCGKADARGI*VLQTAA
Trigger: GGCTGCGGTCTGCAGGACCAAGATGCCTCGGGCGTC...GGCTTTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR CAA 90 bp TGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCCCGGCCGAGGCCGACTCGAAGTaGCCCCGCAGCGTCCGCACA +
Preference number: 5 (lower is better)
Translates to: CGKATGLGLRPVLLPFPAEADSK*PRSVRT
Trigger: TGTGCGGACGCTGCGGGGCAACTTCGAGTCGGCCTC...GGCCGGGAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp GCCATGCCCAGCACCATGCCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGTCGCAGGGGCCAGGGTaGAAGCCACAGAGTGGGCCA +
Preference number: 5 (lower is better)
Translates to: AMPSTMPRNTPQHPEPPRSQGPG*KPQSGP
Trigger: TGGCCCACTCTGTGGCTTCAACCCTGGCCCCTGCGA...CCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGGCATGGTGCTGGGCATGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS GCA 90 bp AGGAGTCGGTCTAGAATGGGCGTGTGGCCGCCTCGGGCTGCAAAGTaGAGGGCCGTGGCCCCCTCATTGTCCCGTGCCGTGAGTCCGATG +
Preference number: 5 (lower is better)
Translates to: RSRSRMGVWPPRAAK*RAVAPSLSRAVSPM
Trigger: CATCGGACTCACGGCACGGGACAATGAGGGGGCCACGGCCCTGCACTTTGCAGCCCGAGGCGGCCACACGCCCATTCTAGACCGACTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS GCA 90 bp CCCCCTGTACTAGCCCATGCACGCCCTTCAGCAGCAGGGACAGGCTaGGTACCAGGCGGGAGATGTGGCTGCACCAGAAGGGCAGGGGCT +
Preference number: 5 (lower is better)
Translates to: PPVLAHARPSAAGTG*VPGGRCGCTRRAGA
Trigger: AGCCCCTGCCCTTCTGGTGCAGCCACATCTCCCGCCTGGTACGCAGCCTGTCCCTGCTGCTGAAGGGCGTGCATGGGCTAGTACAGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000477241.1
ENST00000612395.1
CDS GCA 90 bp TGCAGGGGCCGGGTGGATGGCTTCTCATCCCCCTGTACTAGCCCATaGACGCCCTTCAGCAGCAGGGACAGGCTGCGTACCAGGCGGGAG +
Preference number: 5 (lower is better)
Translates to: CRGRVDGFSSPCTSP*TPFSSRDRLRTRRE
Trigger: CTCCCGCCTGGTACGCAGCCTGTCCCTGCTGCTGAAGGGCGTGCATGGGCTAGTACAGGGGGATGAGAAGCCATCCACCCGGCCCCTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000477241.1
ENST00000612395.1
CDS-3UTR CAA 90 bp CCCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCAGCCACATCCCCATCCTaGGCGGCCACGAGTGCCCGC +
Preference number: 5 (lower is better)
Translates to: PCRHSPLCAAAFESGHQPATSPS*AATSAR
Trigger: GCGGGCACTCGTGGCCGCCAAGGATGGGGATGTGGC...TGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR CAA 90 bp CCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGAGTCGCCGTGGCCCCCTCATaGTCCCGTGCCGTGAGTCCG +
Preference number: 5 (lower is better)
Translates to: PLPSRFCLDNPQGLRQGVAVAPS*SRAVSP
Trigger: CGGACTCACGGCACGGGACAATGAGGGGGCCACGGC...GACTCCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR CAA 90 bp CTGATAAGCCTGTCGCCTGACTGCACCCTCCTCTGTCCCAGGGGGCCTGGATGCGAGGCCGACTCGAAGTaGCCCCGCAGCGTCCGCACA +
Preference number: 5 (lower is better)
Translates to: LISLSPDCTLLCPRGPGCEADSK*PRSVRT
Trigger: TGTGCGGACGCTGCGGGGCAACTTCGAGTCGGCCTC...GCATCCAGGCCCCCTGGGACAGAGGAGGGTGCAGTCAGGCGACAGGCTTATCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp GGCCCTTGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCTCGTCGGTCACGGCCTaGTGGAAGGCGCGCACAGCC +
Preference number: 5 (lower is better)
Translates to: GPCGKATGLGLRPVLLPFSSVTA*WKARTA
Trigger: GGCTGTGCGCGCCTTCCACAAGGCCGTGACCGACGA...GAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACAAGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp CAGTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAAAGCCCATGGGGAGCCTCCTTaGAGGAAGCAGGGCCTCCGG +
Preference number: 5 (lower is better)
Translates to: QWRKPERAGCRIGPCGKAHGEPP*RKQGLR
Trigger: CCGGAGGCCCTGCTTCCTCAAAGGAGGCTCCCCATG...GGCTTTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp TGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCCCGGCCCATGGGGAGCCTCCTTaGAGGAAGCAGGGCCTCCGG +
Preference number: 5 (lower is better)
Translates to: CGKATGLGLRPVLLPFPAHGEPP*RKQGLR
Trigger: CCGGAGGCCCTGCTTCCTCAAAGGAGGCTCCCCATG...GGCCGGGAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp GGCCCTTGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCCCCTGCTCTCCAGCCTaGCTGGGGCCCACGACTAGG +
Preference number: 5 (lower is better)
Translates to: GPCGKATGLGLRPVLLPFPCSPA*LGPTTR
Trigger: CCTAGTCGTGGGCCCCAGCAAGGCTGGAGAGCAGGG...GAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACAAGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp TCAGCAGTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAACCCTGCTCTCCAGCCTaGCTGGGGCCCACGACTAGG +
Preference number: 5 (lower is better)
Translates to: SAVEEAGAGRLQDRPLWKPCSPA*LGPTTR
Trigger: CCTAGTCGTGGGCCCCAGCAAGGCTGGAGAGCAGGG...TTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCACTGCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS GCA 90 bp GCCTCGGGCTGCAAAGTGCAGGGCCGTGGCCCCCTCATTGTCCCGTaGCGTGAGTCCGATGTCGGTGAATGTGACCAGCCAGACGACGAG +
Preference number: 5 (lower is better)
Translates to: ASGCKVQGRGPLIVP*RESDVGECDQPDDE
Trigger: CTCGTCGTCTGGCTGGTCACATTCACCGACATCGGACTCACGGCACGGGACAATGAGGGGGCCACGGCCCTGCACTTTGCAGCCCGAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS GCA 90 bp CAGGTACTGGGCGCAGTCCCGGTGTCCATGGTACTCCGCCAGGTCTaGCGCCGTGTAACCATCTTCATCCCGCAGGGAGGGGTCCACGTG +
Preference number: 5 (lower is better)
Translates to: QVLGAVPVSMVLRQV*RRVTIFIPQGGVHV
Trigger: CACGTGGACCCCTCCCTGCGGGATGAAGATGGTTACACGGCGGCAGACCTGGCGGAGTACCATGGACACCGGGACTGCGCCCAGTACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343063.8
CDS CCA 90 bp AGGATGGGGGTACCCATGAGCAGGAGTCGGTCTAGAATGGGCGTGTaGCCGCCTCGGGCTGCAAAGTGCAGGGCCGTGGCCCCCTCATTG +
Preference number: 5 (lower is better)
Translates to: RMGVPMSRSRSRMGV*PPRAAKCRAVAPSL
Trigger: CAATGAGGGGGCCACGGCCCTGCACTTTGCAGCCCGAGGCGGCCACACGCCCATTCTAGACCGACTCCTGCTCATGGGTACCCCCATCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR CAA 90 bp CCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGAGTCGACGCCCGAGGCATCTaGGTCCTGCAGACCGCAGCC +
Preference number: 5 (lower is better)
Translates to: PLPSRFCLDNPQGLRQGVDARGI*VLQTAA
Trigger: GGCTGCGGTCTGCAGGACCAAGATGCCTCGGGCGTC...GACTCCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR CAA 90 bp CCTAGTCAGCTGCGAGGGTCTCTCTGTTCCATCCAACAGCTTGCCCGCTGCCCTGCCGTGGCCCCCTCATaGTCCCGTGCCGTGAGTCCG +
Preference number: 5 (lower is better)
Translates to: PSQLRGSLCSIQQLARCPAVAPS*SRAVSP
Trigger: CGGACTCACGGCACGGGACAATGAGGGGGCCACGGC...AGGGCAGCGGGCAAGCTGTTGGATGGAACAGAGAGACCCTCGCAGCTGACTAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR CAA 90 bp GCCATGCCCAGCACCATGCCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGGGCAGGAAGTGGCTGTaGACCGTGATGCTGACCAGG +
Preference number: 5 (lower is better)
Translates to: AMPSTMPRNTPQHPEPPRGRKWL*TVMLTR
Trigger: CCTGGTCAGCATCACGGTCAACAGCCACTTCCTGCC...CCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGGCATGGTGCTGGGCATGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp CCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTGAGGCCGACTCGAAGTaGCCCCGCAGCGTCCGCACA +
Preference number: 5 (lower is better)
Translates to: PRNTPQHPEPPRTESISLEADSK*PRSVRT
Trigger: TGTGCGGACGCTGCGGGGCAACTTCGAGTCGGCCTC...AAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp GGCCCTTGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCTCGCAGGGGCCAGGGTaGAAGCCACAGAGTGGGCCA +
Preference number: 5 (lower is better)
Translates to: GPCGKATGLGLRPVLLPFSQGPG*KPQSGP
Trigger: TGGCCCACTCTGTGGCTTCAACCCTGGCCCCTGCGA...GAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACAAGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp GCCATGCCCAGCACCATGCCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGATGATGATGCGCTCCTaGCGCAGGCTGGCCAGGTCT +
Preference number: 5 (lower is better)
Translates to: AMPSTMPRNTPQHPEPPRMMMRS*RRLARS
Trigger: AGACCTGGCCAGCCTGCGCAAGGAGCGCATCATCAT...CCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGGCATGGTGCTGGGCATGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp ACTCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCTCGTCGGTCACGGCCTaGTGGAAGGCGCGCACAGCC +
Preference number: 5 (lower is better)
Translates to: TPQHPEPPRTESISLPVSSSVTA*WKARTA
Trigger: GGCTGTGCGCGCCTTCCACAAGGCCGTGACCGACGA...GGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp CTGTCCCAGGGGGCCTGGATGCCAGGAGGAATATTCCTGAAGCCTCCCGTCCCTTCGTCGGTCACGGCCTaGTGGAAGGCGCGCACAGCC +
Preference number: 5 (lower is better)
Translates to: LSQGAWMPGGIFLKPPVPSSVTA*WKARTA
Trigger: GGCTGTGCGCGCCTTCCACAAGGCCGTGACCGACGA...AGGGACGGGAGGCTTCAGGAATATTCCTCCTGGCATCCAGGCCCCCTGGGACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp CCATGCCCAGCACCATGCCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGAAGGGTCAGACCTGACTaGCGGCCAGGCTCCGTATCC +
Preference number: 5 (lower is better)
Translates to: PCPAPCPGILRSTQSPRGRVRPD*RPGSVS
Trigger: GGATACGGAGCCTGGCCGCAAGTCAGGTCTGACCCT...TCCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGGCATGGTGCTGGGCATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp GGCCCTTGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCCATGGGGAGCCTCCTTaGAGGAAGCAGGGCCTCCGG +
Preference number: 5 (lower is better)
Translates to: GPCGKATGLGLRPVLLPFHGEPP*RKQGLR
Trigger: CCGGAGGCCCTGCTTCCTCAAAGGAGGCTCCCCATG...GAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACAAGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp CCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACCCCTGCTCTCCAGCCTaGCTGGGGCCCACGACTAGG +
Preference number: 5 (lower is better)
Translates to: PAGILLCVQQPLRVGTSHPCSPA*LGPTTR
Trigger: CCTAGTCGTGGGCCCCAGCAAGGCTGGAGAGCAGGG...GTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp TGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGACCCTGCTCTCCAGCCTaGCTGGGGCCCACGACTAGG +
Preference number: 5 (lower is better)
Translates to: CPLPSRFCLDNPQGLRQGPCSPA*LGPTTR
Trigger: CCTAGTCGTGGGCCCCAGCAAGGCTGGAGAGCAGGG...TCCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS CCA 90 bp GTCAGACCTGACTTGCGGCCAGGCTCCGTATCCCAGGCGGGACGCTaGCTGGAGCCAAAGAAGCGGGCTTTGATGTCCTCGAAGCCGTCG +
Preference number: 5 (lower is better)
Translates to: VRPDLRPGSVSQAGR*LEPKKRALMSSKPS
Trigger: CGACGGCTTCGAGGACATCAAAGCCCGCTTCTTTGGCTCCAGCCAGCGTCCCGCCTGGGATACGGAGCCTGGCCGCAAGTCAGGTCTGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000477241.1
ENST00000612395.1
CDS-3UTR CAA 90 bp CCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGAGCTCCCACCATaGTCCTGGGCCTCTGCGGAG +
Preference number: 5 (lower is better)
Translates to: PRNTPQHPEPPRTESISLPELPP*SWASAE
Trigger: CTCCGCAGAGGCCCAGGACAATGGTGGGAGCTCAGG...AAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp TGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGACCTGAGCTCCCACCATaGTCCTGGGCCTCTGCGGAG +
Preference number: 5 (lower is better)
Translates to: CPLPSRFCLDNPQGLRQGPELPP*SWASAE
Trigger: CTCCGCAGAGGCCCAGGACAATGGTGGGAGCTCAGG...TCCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp CAGTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAAAGCCGGCAGGAAGTGGCTGTaGACCGTGATGCTGACCAGG +
Preference number: 5 (lower is better)
Translates to: QWRKPERAGCRIGPCGKAGRKWL*TVMLTR
Trigger: CCTGGTCAGCATCACGGTCAACAGCCACTTCCTGCC...GGCTTTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp TGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGATCGCAGGGGCCAGGGTaGAAGCCACAGAGTGGGCCA +
Preference number: 5 (lower is better)
Translates to: CPLPSRFCLDNPQGLRQGSQGPG*KPQSGP
Trigger: TGGCCCACTCTGTGGCTTCAACCCTGGCCCCTGCGA...TCCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp CCATGCCCAGCACCATGCCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGAATGATGATGCGCTCCTaGCGCAGGCTGGCCAGGTCT +
Preference number: 5 (lower is better)
Translates to: PCPAPCPGILRSTQSPRGMMMRS*RRLARS
Trigger: AGACCTGGCCAGCCTGCGCAAGGAGCGCATCATCAT...TCCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGGCATGGTGCTGGGCATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp GTCCCAGGGGGCCTGGATGCCAGGAGGAATATTCCTGAAGCCTCCCGTCCCTGCAGGGTCAGACCTGACTaGCGGCCAGGCTCCGTATCC +
Preference number: 5 (lower is better)
Translates to: VPGGLDARRNIPEASRPCRVRPD*RPGSVS
Trigger: GGATACGGAGCCTGGCCGCAAGTCAGGTCTGACCCT...GCAGGGACGGGAGGCTTCAGGAATATTCCTCCTGGCATCCAGGCCCCCTGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp TCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCTGGACTGGAGGCAGCCTaGCCCGGCTCACCTGAACAC +
Preference number: 5 (lower is better)
Translates to: SAAPRAPEDGIHLPSCIPGLEAA*PGSPEH
Trigger: GTGTTCAGGTGAGCCGGGCAAGGCTGCCTCCAGTCC...AGGGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp GTCCCAGGGGGCCTGGATGCCAGGAGGAATATTCCTGAAGCCTCCCGTCCCTGCGACTGGGGTGGCCCATaGCCTCACTTCAGGACCTGC +
Preference number: 5 (lower is better)
Translates to: VPGGLDARRNIPEASRPCDWGGP*PHFRTC
Trigger: GCAGGTCCTGAAGTGAGGCAATGGGCCACCCCAGTC...GCAGGGACGGGAGGCTTCAGGAATATTCCTCCTGGCATCCAGGCCCCCTGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp ACTCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCATGGGGAGCCTCCTTaGAGGAAGCAGGGCCTCCGG +
Preference number: 5 (lower is better)
Translates to: TPQHPEPPRTESISLPVSHGEPP*RKQGLR
Trigger: CCGGAGGCCCTGCTTCCTCAAAGGAGGCTCCCCATG...GGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp CAGTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAAAGCCTGTGTGCAGCAGCCTTaGAGAGTGGGCACCAGCCAC +
Preference number: 5 (lower is better)
Translates to: QWRKPERAGCRIGPCGKACVQQP*RVGTSH
Trigger: GTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACA...GGCTTTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp CAGTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAAAGCCGTTCCATCCAACAGCTaGCCCGCTGCCCTCCAGGTT +
Preference number: 5 (lower is better)
Translates to: QWRKPERAGCRIGPCGKAVPSNS*PAALQV
Trigger: AACCTGGAGGGCAGCGGGCAAGCTGTTGGATGGAAC...GGCTTTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp GTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAAAGCCACGTTCCATCCAACAGCTaGCCCGCTGCCCTCCAGGTT +
Preference number: 5 (lower is better)
Translates to: VEEAGAGRLQDRPLWKSHVPSNS*PAALQV
Trigger: AACCTGGAGGGCAGCGGGCAAGCTGTTGGATGGAAC...GTGGCTTTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp CCCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCAGGAAAAGCCACTGGCTaGGGGCTGCGGCCGGTGCTA +
Preference number: 5 (lower is better)
Translates to: PCRHSPLCAAAFESGHQPGKATG*GLRPVL
Trigger: TAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCC...TGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp TTGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGGGAAAAGCCACTGGCTaGGGGCTGCGGCCGGTGCTA +
Preference number: 5 (lower is better)
Translates to: LPAALQVLPGQSPGIEAGGKATG*GLRPVL
Trigger: TAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCC...CCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS TCA 90 bp GCTCCCTGGGAAGAGGCTGGTCAGGATGGCCAGGCCAGGCCGGGCTaGGGGACATGGCTGCCAAGAAGAAGAAGGGTGTTGCAGAAAGGG +
Preference number: 5 (lower is better)
Translates to: APWEEAGQDGQARPG*GTWLPRRRRVLQKG
Trigger: CCCTTTCTGCAACACCCTTCTTCTTCTTGGCAGCCATGTCCCTCAGCCCGGCCTGGCCTGGCCATCCTGACCAGCCTCTTCCCAGGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423032.1
CDS GCA 90 bp AGGCTGGTCAGGATGGCCAGGCCAGGCCGGGCTGAGGGACATGGCTaGCAAGAAGAAGAAGGGTGTTGCAGAAAGGGCAAGGGCTGGGGA +
Preference number: 5 (lower is better)
Translates to: RLVRMARPGRAEGHG*QEEEGCCRKGKGWG
Trigger: TCCCCAGCCCTTGCCCTTTCTGCAACACCCTTCTTCTTCTTGGCAGCCATGTCCCTCAGCCCGGCCTGGCCTGGCCATCCTGACCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423032.1
CDS CCA 90 bp CCACGAGTGCCCGCTGCTTCTCCATCCTCTGGCCCGGGCTCTCAGTaGCGACTCATGCACAGGCTGGGGCTTCCTGTTTCAGACGTGGAT +
Preference number: 5 (lower is better)
Translates to: PRVPAASPSSGPGSQ*RLMHRLGLPVSDVD
Trigger: ATCCACGTCTGAAACAGGAAGCCCCAGCCTGTGCATGAGTCGCCACTGAGAGCCCGGGCCAGAGGATGGAGAAGCAGCGGGCACTCGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343063.8
CDS-3UTR CAA 90 bp CTGCCCATGGAATCTGTCCTCGGAATCACTCCAGCTCCCCCAAATTCACAGATGTTGTGGGCCCGCTGGTaGCCGGGCAGCTGGGCCCGC +
Preference number: 5 (lower is better)
Translates to: LPMESVLGITPAPPNSQMLWARW*PGSWAR
Trigger: GCGGGCCCAGCTGCCCGGCAACCAGCGGGCCCACAA...CATCTGTGAATTTGGGGGAGCTGGAGTGATTCCGAGGACAGATTCCATGGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR CAA 90 bp TTGAGGCAGGGAGTCCTGATAAGCCTGTCGCCTGACTGCACCCTCCTCTGTCCCCCTGAGCTCCCACCATaGTCCTGGGCCTCTGCGGAG +
Preference number: 5 (lower is better)
Translates to: LRQGVLISLSPDCTLLCPPELPP*SWASAE
Trigger: CTCCGCAGAGGCCCAGGACAATGGTGGGAGCTCAGG...GGGACAGAGGAGGGTGCAGTCAGGCGACAGGCTTATCAGGACTCCCTGCCTCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp CATCCAACAGCTTGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGACCTGAGCTCCCACCATaGTCCTGGGCCTCTGCGGAG +
Preference number: 5 (lower is better)
Translates to: HPTACPLPSRFCLDNPQGPELPP*SWASAE
Trigger: CTCCGCAGAGGCCCAGGACAATGGTGGGAGCTCAGG...TCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCAAGCTGTTGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp GGTGATGACCCATTCTCCTGGCTGCCATCAGAAGCTGGGGACAAGCCACACCCTGAGGCCGACTCGAAGTaGCCCCGCAGCGTCCGCACA +
Preference number: 5 (lower is better)
Translates to: GDDPFSWLPSEAGDKPHPEADSK*PRSVRT
Trigger: TGTGCGGACGCTGCGGGGCAACTTCGAGTCGGCCTC...AGGGTGTGGCTTGTCCCCAGCTTCTGATGGCAGCCAGGAGAATGGGTCATCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp TCAGCAGTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAAATGATGATGCGCTCCTaGCGCAGGCTGGCCAGGTCT +
Preference number: 5 (lower is better)
Translates to: SAVEEAGAGRLQDRPLWKMMMRS*RRLARS
Trigger: AGACCTGGCCAGCCTGCGCAAGGAGCGCATCATCAT...TTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCACTGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp TTGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGAGGGTCAGACCTGACTaGCGGCCAGGCTCCGTATCC +
Preference number: 5 (lower is better)
Translates to: LPAALQVLPGQSPGIEAGRVRPD*RPGSVS
Trigger: GGATACGGAGCCTGGCCGCAAGTCAGGTCTGACCCT...CCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp CCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGAGTCAGGGTCAGACCTGACTaGCGGCCAGGCTCCGTATCC +
Preference number: 5 (lower is better)
Translates to: PLPSRFCLDNPQGLRQGVRVRPD*RPGSVS
Trigger: GGATACGGAGCCTGGCCGCAAGTCAGGTCTGACCCT...GACTCCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp GTCCCAGGGGGCCTGGATGCCAGGAGGAATATTCCTGAAGCCTCCCGTCCCTGCCAGATGTCCTCACCGTaGAAGCTGCCCTGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: VPGGLDARRNIPEASRPCQMSSP*KLPCWE
Trigger: CTCCCAGCAGGGCAGCTTCAACGGTGAGGACATCTG...GCAGGGACGGGAGGCTTCAGGAATATTCCTCCTGGCATCCAGGCCCCCTGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp GGCCCTTGTGGAAAAGCCACTGGCTTGGGGCTGCGGCCGGTGCTACTTCCCTTCCAGATGTCCTCACCGTaGAAGCTGCCCTGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: GPCGKATGLGLRPVLLPFQMSSP*KLPCWE
Trigger: CTCCCAGCAGGGCAGCTTCAACGGTGAGGACATCTG...GAAGGGAAGTAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCCACAAGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp CCTTGGGCCCTAGTCAGCTGCGAGGGTCTCTCTGTTCCATCCAACAGCTTGCCCGGACTGGAGGCAGCCTaGCCCGGCTCACCTGAACAC +
Preference number: 5 (lower is better)
Translates to: PWALVSCEGLSVPSNSLPGLEAA*PGSPEH
Trigger: GTGTTCAGGTGAGCCGGGCAAGGCTGCCTCCAGTCC...GGGCAAGCTGTTGGATGGAACAGAGAGACCCTCGCAGCTGACTAGGGCCCAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp CCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACGACTGGGGTGGCCCATaGCCTCACTTCAGGACCTGC +
Preference number: 5 (lower is better)
Translates to: PAGILLCVQQPLRVGTSHDWGGP*PHFRTC
Trigger: GCAGGTCCTGAAGTGAGGCAATGGGCCACCCCAGTC...GTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp TCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCTGCTGCCCTCCAGGTTTaGCCTGGACAATCCCCAGGG +
Preference number: 5 (lower is better)
Translates to: SAAPRAPEDGIHLPSCIPAALQV*PGQSPG
Trigger: CCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGC...AGGGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS CCA 90 bp ACCCATGCCTCCAGAGCAGGTGAAGGGGCTCTGCTCAGAGTCCTCTaGTCAGGTTCACTTCATCCTCCGGCGGAAGCAGCAGCTGAGGCC +
Preference number: 5 (lower is better)
Translates to: THASRAGEGALLRVL*SGSLHPPAEAAAEA
Trigger: GGCCTCAGCTGCTGCTTCCGCCGGAGGATGAAGTGAACCTGACCAGAGGACTCTGAGCAGAGCCCCTTCACCTGCTCTGGAGGCATGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477241.1
CDS-3UTR CAA 90 bp CCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACCGCTGCACCAAGAACTaGACGCAGTCCAGGTGGCCA +
Preference number: 5 (lower is better)
Translates to: PAGILLCVQQPLRVGTSHRCTKN*TQSRWP
Trigger: TGGCCACCTGGACTGCGTCAAGTTCTTGGTGCAGCG...GTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS-3UTR CAA 90 bp CCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGAGTCGGCAGGAAGTGGCTGTaGACCGTGATGCTGACCAGG +
Preference number: 5 (lower is better)
Translates to: PLPSRFCLDNPQGLRQGVGRKWL*TVMLTR
Trigger: CCTGGTCAGCATCACGGTCAACAGCCACTTCCTGCC...GACTCCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp CAGAGCCTGGGTGATGACCCATTCTCCTGGCTGCCATCAGAAGCTGGGGACAAGTCGCAGGGGCCAGGGTaGAAGCCACAGAGTGGGCCA +
Preference number: 5 (lower is better)
Translates to: QSLGDDPFSWLPSEAGDKSQGPG*KPQSGP
Trigger: TGGCCCACTCTGTGGCTTCAACCCTGGCCCCTGCGA...CTTGTCCCCAGCTTCTGATGGCAGCCAGGAGAATGGGTCATCACCCAGGCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp TCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCTATGATGATGCGCTCCTaGCGCAGGCTGGCCAGGTCT +
Preference number: 5 (lower is better)
Translates to: SAAPRAPEDGIHLPSCIPMMMRS*RRLARS
Trigger: AGACCTGGCCAGCCTGCGCAAGGAGCGCATCATCAT...AGGGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp GTCCTCGGAATCACTCCAGCTCCCCCAAATTCACAGATGGGAGGTGAAGGGGTGTCGTCGGTCACGGCCTaGTGGAAGGCGCGCACAGCC +
Preference number: 5 (lower is better)
Translates to: VLGITPAPPNSQMGGEGVSSVTA*WKARTA
Trigger: GGCTGTGCGCGCCTTCCACAAGGCCGTGACCGACGA...CACCCCTTCACCTCCCATCTGTGAATTTGGGGGAGCTGGAGTGATTCCGAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
CDS-3UTR CAA 90 bp TCAGCAGTGGAGGAAGCCGGAGCGGGCCGGCTGCAGGATAGGCCCTTGTGGAAACCAAAGAAGCGGGCTTaGATGTCCTCGAAGCCGTCG +
Preference number: 5 (lower is better)
Translates to: SAVEEAGAGRLQDRPLWKPKKRA*MSSKPS
Trigger: CGACGGCTTCGAGGACATCAAAGCCCGCTTCTTTGG...TTTCCACAAGGGCCTATCCTGCAGCCGGCCCGCTCCGGCTTCCTCCACTGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp ACTCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCAGATGTCCTCACCGTaGAAGCTGCCCTGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: TPQHPEPPRTESISLPVSQMSSP*KLPCWE
Trigger: CTCCCAGCAGGGCAGCTTCAACGGTGAGGACATCTG...GGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp TGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGATGTGTGCAGCAGCCTTaGAGAGTGGGCACCAGCCAC +
Preference number: 5 (lower is better)
Translates to: CPLPSRFCLDNPQGLRQGCVQQP*RVGTSH
Trigger: GTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACA...TCCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp CCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGAGTCTGTGTGCAGCAGCCTTaGAGAGTGGGCACCAGCCAC +
Preference number: 5 (lower is better)
Translates to: PLPSRFCLDNPQGLRQGVCVQQP*RVGTSH
Trigger: GTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACA...GACTCCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp TTGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGTGTGTGCAGCAGCCTTaGAGAGTGGGCACCAGCCAC +
Preference number: 5 (lower is better)
Translates to: LPAALQVLPGQSPGIEAGCVQQP*RVGTSH
Trigger: GTGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACA...CCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp TTGAGGCAGGGAGTCCTGATAAGCCTGTCGCCTGACTGCACCCTCCTCTGTCCCGCTGCCCTCCAGGTTTaGCCTGGACAATCCCCAGGG +
Preference number: 5 (lower is better)
Translates to: LRQGVLISLSPDCTLLCPAALQV*PGQSPG
Trigger: CCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGC...GGGACAGAGGAGGGTGCAGTCAGGCGACAGGCTTATCAGGACTCCCTGCCTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp TTGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGGTTCCATCCAACAGCTaGCCCGCTGCCCTCCAGGTT +
Preference number: 5 (lower is better)
Translates to: LPAALQVLPGQSPGIEAGVPSNS*PAALQV
Trigger: AACCTGGAGGGCAGCGGGCAAGCTGTTGGATGGAAC...CCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp CAGAGCCTGGGTGATGACCCATTCTCCTGGCTGCCATCAGAAGCTGGGGACAAGGGAAAAGCCACTGGCTaGGGGCTGCGGCCGGTGCTA +
Preference number: 5 (lower is better)
Translates to: QSLGDDPFSWLPSEAGDKGKATG*GLRPVL
Trigger: TAGCACCGGCCGCAGCCCCAAGCCAGTGGCTTTTCC...CTTGTCCCCAGCTTCTGATGGCAGCCAGGAGAATGGGTCATCACCCAGGCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp CCTTGGGCCCTAGTCAGCTGCGAGGGTCTCTCTGTTCCATCCAACAGCTTGCCCGGCAGGAAGTGGCTGTaGACCGTGATGCTGACCAGG +
Preference number: 5 (lower is better)
Translates to: PWALVSCEGLSVPSNSLPGRKWL*TVMLTR
Trigger: CCTGGTCAGCATCACGGTCAACAGCCACTTCCTGCC...GGGCAAGCTGTTGGATGGAACAGAGAGACCCTCGCAGCTGACTAGGGCCCAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp CCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGAGTCCCAAAGAAGCGGGCTTaGATGTCCTCGAAGCCGTCG +
Preference number: 5 (lower is better)
Translates to: PLPSRFCLDNPQGLRQGVPKKRA*MSSKPS
Trigger: CGACGGCTTCGAGGACATCAAAGCCCGCTTCTTTGG...GACTCCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp CCCAGGAATACTCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCAAAGAAGCGGGCTTaGATGTCCTCGAAGCCGTCG +
Preference number: 5 (lower is better)
Translates to: PRNTPQHPEPPRTESISLPKKRA*MSSKPS
Trigger: CGACGGCTTCGAGGACATCAAAGCCCGCTTCTTTGG...AAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGAGTATTCCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp CCTTGGGCCCTAGTCAGCTGCGAGGGTCTCTCTGTTCCATCCAACAGCTTGCCCCAGATGTCCTCACCGTaGAAGCTGCCCTGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: PWALVSCEGLSVPSNSLPQMSSP*KLPCWE
Trigger: CTCCCAGCAGGGCAGCTTCAACGGTGAGGACATCTG...GGGCAAGCTGTTGGATGGAACAGAGAGACCCTCGCAGCTGACTAGGGCCCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp CAGAGCCTGGGTGATGACCCATTCTCCTGGCTGCCATCAGAAGCTGGGGACAAGGACTGGGGTGGCCCATaGCCTCACTTCAGGACCTGC +
Preference number: 5 (lower is better)
Translates to: QSLGDDPFSWLPSEAGDKDWGGP*PHFRTC
Trigger: GCAGGTCCTGAAGTGAGGCAATGGGCCACCCCAGTC...CTTGTCCCCAGCTTCTGATGGCAGCCAGGAGAATGGGTCATCACCCAGGCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp GGTGATGACCCATTCTCCTGGCTGCCATCAGAAGCTGGGGACAAGCCACACCCTGCTGCCCTCCAGGTTTaGCCTGGACAATCCCCAGGG +
Preference number: 5 (lower is better)
Translates to: GDDPFSWLPSEAGDKPHPAALQV*PGQSPG
Trigger: CCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGC...AGGGTGTGGCTTGTCCCCAGCTTCTGATGGCAGCCAGGAGAATGGGTCATCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp TCCTGTATCCCTCCCTCCAGTACCCAGGCCCCTGTGAAGAGGTGCACTGTGGGTGTTCCATCCAACAGCTaGCCCGCTGCCCTCCAGGTT +
Preference number: 5 (lower is better)
Translates to: SCIPPSSTQAPVKRCTVGVPSNS*PAALQV
Trigger: AACCTGGAGGGCAGCGGGCAAGCTGTTGGATGGAAC...ACCCACAGTGCACCTCTTCACAGGGGCCTGGGTACTGGAGGGAGGGATACAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS GCA 90 bp TGCGCCCAGGAAGGCCTAGAACAACGCTTGGCACAGGCAGGCATGTaGCACAAATCCGCCAAGTGGAAGGATACGTGGGACCCATGCCTC +
Preference number: 5 (lower is better)
Translates to: CAQEGLEQRLAQAGM*HKSAKWKDTWDPCL
Trigger: GAGGCATGGGTCCCACGTATCCTTCCACTTGGCGGATTTGTGGCACATGCCTGCCTGTGCCAAGCGTTGTTCTAGGCCTTCCTGGGCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477241.1
CDS-3UTR CAA 90 bp CATCCAACAGCTTGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGACCAAAGAAGCGGGCTTaGATGTCCTCGAAGCCGTCG +
Preference number: 5 (lower is better)
Translates to: HPTACPLPSRFCLDNPQGPKKRA*MSSKPS
Trigger: CGACGGCTTCGAGGACATCAAAGCCCGCTTCTTTGG...TCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCAAGCTGTTGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp GTCCCAGGGGGCCTGGATGCCAGGAGGAATATTCCTGAAGCCTCCCGTCCCTGCCAATTTTACATCTTCTaGAGTGTCCGTCCCCTTGGG +
Preference number: 5 (lower is better)
Translates to: VPGGLDARRNIPEASRPCQFYIF*SVRPLG
Trigger: CCCAAGGGGACGGACACTCAAGAAGATGTAAAATTG...GCAGGGACGGGAGGCTTCAGGAATATTCCTCCTGGCATCCAGGCCCCCTGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp CTGATAAGCCTGTCGCCTGACTGCACCCTCCTCTGTCCCAGGGGGCCTGGATGCGGTCATTCTCCAAAGTaGAACATCTCAGCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: LISLSPDCTLLCPRGPGCGHSPK*NISASF
Trigger: GAAGGAAGCTGAGATGTTCAACTTTGGAGAATGACC...GCATCCAGGCCCCCTGGGACAGAGGAGGGTGCAGTCAGGCGACAGGCTTATCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp CCCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCACAATTTTACATCTTCTaGAGTGTCCGTCCCCTTGGG +
Preference number: 5 (lower is better)
Translates to: PCRHSPLCAAAFESGHQPQFYIF*SVRPLG
Trigger: CCCAAGGGGACGGACACTCAAGAAGATGTAAAATTG...TGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp ACTCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCCAATTTTACATCTTCTaGAGTGTCCGTCCCCTTGGG +
Preference number: 5 (lower is better)
Translates to: TPQHPEPPRTESISLPVSQFYIF*SVRPLG
Trigger: CCCAAGGGGACGGACACTCAAGAAGATGTAAAATTG...GGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp CCCTGCCGGCATTCTCCTCTGTGTGCAGCAGCCTTTGAGAGTGGGCACCAGCCAGGTCATTCTCCAAAGTaGAACATCTCAGCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: PCRHSPLCAAAFESGHQPGHSPK*NISASF
Trigger: GAAGGAAGCTGAGATGTTCAACTTTGGAGAATGACC...TGGCTGGTGCCCACTCTCAAAGGCTGCTGCACACAGAGGAGAATGCCGGCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp ACTCCGCAGCACCCAGAGCCCCCGAGGACGGAATCCATCTCCCTTCCTGTATCCGGTCATTCTCCAAAGTaGAACATCTCAGCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: TPQHPEPPRTESISLPVSGHSPK*NISASF
Trigger: GAAGGAAGCTGAGATGTTCAACTTTGGAGAATGACC...GGATACAGGAAGGGAGATGGATTCCGTCCTCGGGGGCTCTGGGTGCTGCGGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp TTGCCCGCTGCCCTCCAGGTTTTGCCTGGACAATCCCCAGGGATTGAGGCAGGGGGTCATTCTCCAAAGTaGAACATCTCAGCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: LPAALQVLPGQSPGIEAGGHSPK*NISASF
Trigger: GAAGGAAGCTGAGATGTTCAACTTTGGAGAATGACC...CCCTGCCTCAATCCCTGGGGATTGTCCAGGCAAAACCTGGAGGGCAGCGGGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS-3UTR CAA 90 bp TCCTGTATCCCTCCCTCCAGTACCCAGGCCCCTGTGAAGAGGTGCACTGTGGGTCAATTTTACATCTTCTaGAGTGTCCGTCCCCTTGGG +
Preference number: 5 (lower is better)
Translates to: SCIPPSSTQAPVKRCTVGQFYIF*SVRPLG
Trigger: CCCAAGGGGACGGACACTCAAGAAGATGTAAAATTG...ACCCACAGTGCACCTCTTCACAGGGGCCTGGGTACTGGAGGGAGGGATACAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000612395.1
CDS GCA 72 bp CCCCCTCGCGGACCAGCCAGCACAGCTCGGCCAGGCTaGCCGTGGCAGCGGCGTCATGCGCTGGGGTGGCCC +
Preference number: 6 (lower is better)
Translates to: PPRGPASTARPG*PWQRRHALGWP
Trigger: GGGCCACCCCAGCGCATGACGCCGCTGCCACGGGCAGCCTGGCCGAGCTGTGCTGGCTGGTCCGCGAGGGGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS CCA 72 bp GTGGCAGCGGCGTCATGCGCTGGGGTGGCCCCGTTGTaGGCCCGCTGGTTGCCGGGCAGCTGGGCCCGCTGC +
Preference number: 6 (lower is better)
Translates to: VAAASCAGVAPL*ARWLPGSWARC
Trigger: GCAGCGGGCCCAGCTGCCCGGCAACCAGCGGGCCCACAACGGGGCCACCCCAGCGCATGACGCCGCTGCCAC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS CCA 72 bp CTCGGCCAGGCTGCCCGTGGCAGCGGCGTCATGCGCTaGGGTGGCCCCGTTGTGGGCCCGCTGGTTGCCGGG +
Preference number: 6 (lower is better)
Translates to: LGQAARGSGVMR*GGPVVGPLVAG
Trigger: CCCGGCAACCAGCGGGCCCACAACGGGGCCACCCCAGCGCATGACGCCGCTGCCACGGGCAGCCTGGCCGAG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS CCA 72 bp CGGCGGCCGGCGGCCACCTCGTCGGTCACGGCCTTGTaGAAGGCGCGCACAGCCTCCCAGCCGTGGGTGCCC +
Preference number: 6 (lower is better)
Translates to: RRPAATSSVTAL*KARTASQPWVP
Trigger: GGGCACCCACGGCTGGGAGGCTGTGCGCGCCTTCCACAAGGCCGTGACCGACGAGGTGGCCGCCGGCCGCCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000477241.1
ENST00000612395.1
CDS CAA 72 bp GCCCGGCGGCCGGCGGCCACCTCGTCGGTCACGGCCTaGTGGAAGGCGCGCACAGCCTCCCAGCCGTGGGTG +
Preference number: 6 (lower is better)
Translates to: ARRPAATSSVTA*WKARTASQPWV
Trigger: CACCCACGGCTGGGAGGCTGTGCGCGCCTTCCACAAGGCCGTGACCGACGAGGTGGCCGCCGGCCGCCGGGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000477241.1
ENST00000612395.1
CDS CAA 90 bp TCGGTCCAGGCCCGGCGGCCGGCGGCCACCTCGTCGGTCACGGCCTaGTGGAAGGCGCGCACAGCCTCCCAGCCGTGGGTGCCCAGGTGC +
Preference number: 6 (lower is better)
Translates to: SVQARRPAATSSVTA*WKARTASQPWVPRC
Trigger: GCACCTGGGCACCCACGGCTGGGAGGCTGTGCGCGCCTTCCACAAGGCCGTGACCGACGAGGTGGCCGCCGGCCGCCGGGCCTGGACCGA
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000477241.1
ENST00000612395.1
CDS CCA 72 bp CCAGGCTGCCCGTGGCAGCGGCGTCATGCGCTGGGGTaGCCCCGTTGTGGGCCCGCTGGTTGCCGGGCAGCT +
Preference number: 6 (lower is better)
Translates to: PGCPWQRRHALG*PRCGPAGCRAA
Trigger: AGCTGCCCGGCAACCAGCGGGCCCACAACGGGGCCACCCCAGCGCATGACGCCGCTGCCACGGGCAGCCTGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS GCA 72 bp CACAGCTCGGCCAGGCTGCCCGTGGCAGCGGCGTCATaGGCTGGGGTGGCCCCGTTGTGGGCCCGCTGGTTG +
Preference number: 6 (lower is better)
Translates to: HSSARLPVAAAS*AGVAPLWARWL
Trigger: CAACCAGCGGGCCCACAACGGGGCCACCCCAGCGCATGACGCCGCTGCCACGGGCAGCCTGGCCGAGCTGTG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS CCA 72 bp GGGCTCCTGGCGGCCTCCTGGCCCCGCAACCCCGCGTaGCGGGCTCCTAGGGTCCTGCAGGCCACTGTCTTG +
Preference number: 6 (lower is better)
Translates to: GLLAASWPRNPA*RAPRVLQATVL
Trigger: CAAGACAGTGGCCTGCAGGACCCTAGGAGCCCGCCACGCGGGGTTGCGGGGCCAGGAGGCCGCCAGGAGCCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000477241.1
ENST00000612395.1
CDS CCA 72 bp GGTGCAGCGGCCGGGCTCCCTCCCGGGTCTCTAGCGTaGCCGAGTGGCCCTCGTGGAGCAGCCACTCCACCA +
Preference number: 6 (lower is better)
Translates to: GAAAGLPPGSLA*PSGPRGAATPP
Trigger: TGGTGGAGTGGCTGCTCCACGAGGGCCACTCGGCCACGCTAGAGACCCGGGAGGGAGCCCGGCCGCTGCACC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS GCA 72 bp CCTCCTGGCAGGCCAGGTAGAGTGGGGAGGCGCCACTaGGTGTCCGCCGGTTCACGCTGCTGCCATGCGCGG +
Preference number: 6 (lower is better)
Translates to: PPGRPGRVGRRH*VSAGSRCCHAR
Trigger: CCGCGCATGGCAGCAGCGTGAACCGGCGGACACGCAGTGGCGCCTCCCCACTCTACCTGGCCTGCCAGGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS CCA 72 bp AGCAGGGGCACCGGCTGGGCCACCTCCCGCAGGTACTaGGCGCAGTCCCGGTGTCCATGGTACTCCGCCAGG +
Preference number: 6 (lower is better)
Translates to: SRGTGWATSRRY*AQSRCPWYSAR
Trigger: CCTGGCGGAGTACCATGGACACCGGGACTGCGCCCAGTACCTGCGGGAGGTGGCCCAGCCGGTGCCCCTGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343063.8
CDS CCA 72 bp TCCACTCTGGGATGGGCTGGCCGCGCTCATCCCGCGTaGGCACCAGCCCGTCGATGTCGCCTGAGGGCAGCC +
Preference number: 6 (lower is better)
Translates to: STLGWAGRAHPA*APARRCRLRAA
Trigger: GGCTGCCCTCAGGCGACATCGACGGGCTGGTGCCCACGCGGGATGAGCGCGGCCAGCCCATCCCAGAGTGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000423032.1
ENST00000612395.1
CDS CAA 90 bp GCGCCAGCCTCCAGCAGCCGCTCCAACGTCGCCACATCCCCATCCTaGGCGGCCACGAGTGCCCGCTGCTTCTCCATCCTCTGGCCCGGG +
Preference number: 6 (lower is better)
Translates to: APASSSRSNVATSPS*AATSARCFSILWPG
Trigger: CCCGGGCCAGAGGATGGAGAAGCAGCGGGCACTCGTGGCCGCCAAGGATGGGGATGTGGCGACGTTGGAGCGGCTGCTGGAGGCTGGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343063.8
CDS CAA 90 bp GCCTCCTCAACCTCCAGTCCGGGCGCCCGGGGCAGGAAGTGGCTGTaGACCGTGATGCTGACCAGGGGCTCGGGCAGCAGGGCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: ASSTSSPGARGRKWL*TVMLTRGSGSRACS
Trigger: GCTGCAGGCCCTGCTGCCCGAGCCCCTGGTCAGCATCACGGTCAACAGCCACTTCCTGCCCCGGGCGCCCGGACTGGAGGTTGAGGAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000477241.1
ENST00000612395.1
CDS TCA 72 bp GCTGGCCAGGTCTGGGCCGGCTGCGGCACCCGCCTCTaGTGGCACCTCCTCGCAGCTGATGCCAGAGTCGCT +
Preference number: 6 (lower is better)
Translates to: AGQVWAGCGTRL*WHLLAADARVA
Trigger: AGCGACTCTGGCATCAGCTGCGAGGAGGTGCCATCAGAGGCGGGTGCCGCAGCCGGCCCAGACCTGGCCAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000477241.1
ENST00000612395.1
CDS GCA 72 bp TTGAGGCAGGTCAGGTCCCCACTGACGGCAGCGTGGTaGAGCGGCCGGGCTCCCTCCCGGGTCTCTAGCGTG +
Preference number: 6 (lower is better)
Translates to: LRQVRSPLTAAW*SGRAPSRVSSV
Trigger: CACGCTAGAGACCCGGGAGGGAGCCCGGCCGCTGCACCACGCTGCCGTCAGTGGGGACCTGACCTGCCTCAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS GCA 72 bp AGTGGCCACGGGCGGCGGCAGCGTGCAGGGCGCTCATaGCATCGAGAGCACGAAGGTGCACGTCAGCGCCAC +
Preference number: 6 (lower is better)
Translates to: SGHGRRQRAGRS*HREHEGARQRH
Trigger: GTGGCGCTGACGTGCACCTTCGTGCTCTCGATGGCATGAGCGCCCTGCACGCTGCCGCCGCCCGTGGCCACT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS CCA 72 bp AGCAGCAGGGACAGGCTGCGTACCAGGCGGGAGATGTaGCTGCACCAGAAGGGCAGGGGCTGCACCCCGGGG +
Preference number: 6 (lower is better)
Translates to: SSRDRLRTRREM*LHQKGRGCTPG
Trigger: CCCCGGGGTGCAGCCCCTGCCCTTCTGGTGCAGCCACATCTCCCGCCTGGTACGCAGCCTGTCCCTGCTGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000477241.1
ENST00000612395.1
CDS GCA 72 bp AAGGCGCGCACAGCCTCCCAGCCGTGGGTGCCCAGGTaGTCGAAGACCTCGAAGCACAGCAGGTGGCGCAGC +
Preference number: 6 (lower is better)
Translates to: KARTASQPWVPR*SKTSKHSRWRS
Trigger: GCTGCGCCACCTGCTGTGCTTCGAGGTCTTCGAGCACCTGGGCACCCACGGCTGGGAGGCTGTGCGCGCCTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000477241.1
ENST00000612395.1
CDS CCA 72 bp CGAGTGGCCCTCGTGGAGCAGCCACTCCACCAGCACTaGGTGTCCAAAACGGGCGGCCAGGTGCAGCGGGGA +
Preference number: 6 (lower is better)
Translates to: RVALVEQPLHQH*VSKTGGQVQRG
Trigger: TCCCCGCTGCACCTGGCCGCCCGTTTTGGACACCCAGTGCTGGTGGAGTGGCTGCTCCACGAGGGCCACTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS CCA 72 bp TCCTCAACCTCCAGTCCGGGCGCCCGGGGCAGGAAGTaGCTGTTGACCGTGATGCTGACCAGGGGCTCGGGC +
Preference number: 6 (lower is better)
Translates to: SSTSSPGARGRK*LLTVMLTRGSG
Trigger: GCCCGAGCCCCTGGTCAGCATCACGGTCAACAGCCACTTCCTGCCCCGGGCGCCCGGACTGGAGGTTGAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000477241.1
ENST00000612395.1
CDS CAA 90 bp GCCGATCTCCTCCAGTGGCTGAGGAAGAGCATGATGATGCGCTCCTaGCGCAGGCTGGCCAGGTCTGGGCCGGCTGCGGCACCCGCCTCT +
Preference number: 6 (lower is better)
Translates to: ADLLQWLRKSMMMRS*RRLARSGPAAAPAS
Trigger: AGAGGCGGGTGCCGCAGCCGGCCCAGACCTGGCCAGCCTGCGCAAGGAGCGCATCATCATGCTCTTCCTCAGCCACTGGAGGAGATCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000477241.1
ENST00000612395.1
CDS GCA 72 bp TCCACCAGCACTGGGTGTCCAAAACGGGCGGCCAGGTaGAGCGGGGAGACGCCCGAGGCATCTTGGTCCTGC +
Preference number: 6 (lower is better)
Translates to: STSTGCPKRAAR*SGETPEASWSC
Trigger: GCAGGACCAAGATGCCTCGGGCGTCTCCCCGCTGCACCTGGCCGCCCGTTTTGGACACCCAGTGCTGGTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS GCA 72 bp TCTAGAATGGGCGTGTGGCCGCCTCGGGCTGCAAAGTaGAGGGCCGTGGCCCCCTCATTGTCCCGTGCCGTG +
Preference number: 6 (lower is better)
Translates to: SRMGVWPPRAAK*RAVAPSLSRAV
Trigger: CACGGCACGGGACAATGAGGGGGCCACGGCCCTGCACTTTGCAGCCCGAGGCGGCCACACGCCCATTCTAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS CCA 72 bp ACGGCCTTGTGGAAGGCGCGCACAGCCTCCCAGCCGTaGGTGCCCAGGTGCTCGAAGACCTCGAAGCACAGC +
Preference number: 6 (lower is better)
Translates to: TALWKARTASQP*VPRCSKTSKHS
Trigger: GCTGTGCTTCGAGGTCTTCGAGCACCTGGGCACCCACGGCTGGGAGGCTGTGCGCGCCTTCCACAAGGCCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000477241.1
ENST00000612395.1
CDS CAA 90 bp GTGTGGCCGCCTCGGGCTGCAAAGTGCAGGGCCGTGGCCCCCTCATaGTCCCGTGCCGTGAGTCCGATGTCGGTGAATGTGACCAGCCAG +
Preference number: 6 (lower is better)
Translates to: VWPPRAAKCRAVAPS*SRAVSPMSVNVTSQ
Trigger: CTGGCTGGTCACATTCACCGACATCGGACTCACGGCACGGGACAATGAGGGGGCCACGGCCCTGCACTTTGCAGCCCGAGGCGGCCACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS GCA 72 bp GGCGCAGTCCCGGTGTCCATGGTACTCCGCCAGGTCTaGCGCCGTGTAACCATCTTCATCCCGCAGGGAGGG +
Preference number: 6 (lower is better)
Translates to: GAVPVSMVLRQV*RRVTIFIPQGG
Trigger: CCCTCCCTGCGGGATGAAGATGGTTACACGGCGGCAGACCTGGCGGAGTACCATGGACACCGGGACTGCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343063.8
CDS GCA 72 bp CCTTGTGGAAGGCGCGCACAGCCTCCCAGCCGTGGGTaGCCAGGTGCTCGAAGACCTCGAAGCACAGCAGGT +
Preference number: 6 (lower is better)
Translates to: PCGRRAQPPSRG*PGARRPRSTAG
Trigger: ACCTGCTGTGCTTCGAGGTCTTCGAGCACCTGGGCACCCACGGCTGGGAGGCTGTGCGCGCCTTCCACAAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000477241.1
ENST00000612395.1
CDS CCA 72 bp TTGGCGGCCACGAGTGCCCGCTGCTTCTCCATCCTCTaGCCCGGGCTCTCAGTGGCGACTCATGCACAGGCT +
Preference number: 6 (lower is better)
Translates to: LAATSARCFSIL*PGLSVATHAQA
Trigger: AGCCTGTGCATGAGTCGCCACTGAGAGCCCGGGCCAGAGGATGGAGAAGCAGCGGGCACTCGTGGCCGCCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343063.8
CDS CCA 72 bp CCAGCAGCCGCTCCAACGTCGCCACATCCCCATCCTTaGCGGCCACGAGTGCCCGCTGCTTCTCCATCCTCT +
Preference number: 6 (lower is better)
Translates to: PAAAPTSPHPHP*RPRVPAASPSS
Trigger: AGAGGATGGAGAAGCAGCGGGCACTCGTGGCCGCCAAGGATGGGGATGTGGCGACGTTGGAGCGGCTGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343063.8
CDS CCA 72 bp GTACCCATGAGCAGGAGTCGGTCTAGAATGGGCGTGTaGCCGCCTCGGGCTGCAAAGTGCAGGGCCGTGGCC +
Preference number: 6 (lower is better)
Translates to: VPMSRSRSRMGV*PPRAAKCRAVA
Trigger: GGCCACGGCCCTGCACTTTGCAGCCCGAGGCGGCCACACGCCCATTCTAGACCGACTCCTGCTCATGGGTAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS CAA 72 bp TCCAGCAGCCGCTCCAACGTCGCCACATCCCCATCCTaGGCGGCCACGAGTGCCCGCTGCTTCTCCATCCTC +
Preference number: 6 (lower is better)
Translates to: SSSRSNVATSPS*AATSARCFSIL
Trigger: GAGGATGGAGAAGCAGCGGGCACTCGTGGCCGCCAAGGATGGGGATGTGGCGACGTTGGAGCGGCTGCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343063.8
CDS GCA 72 bp CTAGCCCATGCACGCCCTTCAGCAGCAGGGACAGGCTaGGTACCAGGCGGGAGATGTGGCTGCACCAGAAGG +
Preference number: 6 (lower is better)
Translates to: LAHARPSAAGTG*VPGGRCGCTRR
Trigger: CCTTCTGGTGCAGCCACATCTCCCGCCTGGTACGCAGCCTGTCCCTGCTGCTGAAGGGCGTGCATGGGCTAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000477241.1
ENST00000612395.1
CDS CCA 72 bp GACTTGCGGCCAGGCTCCGTATCCCAGGCGGGACGCTaGCTGGAGCCAAAGAAGCGGGCTTTGATGTCCTCG +
Preference number: 6 (lower is better)
Translates to: DLRPGSVSQAGR*LEPKKRALMSS
Trigger: CGAGGACATCAAAGCCCGCTTCTTTGGCTCCAGCCAGCGTCCCGCCTGGGATACGGAGCCTGGCCGCAAGTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000477241.1
ENST00000612395.1
CDS CAA 72 bp CCTCGGGCTGCAAAGTGCAGGGCCGTGGCCCCCTCATaGTCCCGTGCCGTGAGTCCGATGTCGGTGAATGTG +
Preference number: 6 (lower is better)
Translates to: PRAAKCRAVAPS*SRAVSPMSVNV
Trigger: CACATTCACCGACATCGGACTCACGGCACGGGACAATGAGGGGGCCACGGCCCTGCACTTTGCAGCCCGAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS TCA 72 bp TCAGCCGCCAACCGGCCCAGCTCACTCTCATACTCCTaGCAGCGGCGCCGAAGCTGCAGGTCTGCAATCTGC +
Preference number: 6 (lower is better)
Translates to: SAANRPSSLSYS*QRRRSCRSAIC
Trigger: GCAGATTGCAGACCTGCAGCTTCGGCGCCGCTGTCAGGAGTATGAGAGTGAGCTGGGCCGGTTGGCGGCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000477241.1
ENST00000612395.1
CDS GCA 72 bp GCGTGCAGGGCGCTCATGCCATCGAGAGCACGAAGGTaGACGTCAGCGCCACAGTCCTTCACCAGGAACTGG +
Preference number: 6 (lower is better)
Translates to: ACRALMPSRARR*TSAPQSFTRNW
Trigger: CCAGTTCCTGGTGAAGGACTGTGGCGCTGACGTGCACCTTCGTGCTCTCGATGGCATGAGCGCCCTGCACGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS GCA 72 bp CGGGTGGATGGCTTCTCATCCCCCTGTACTAGCCCATaGACGCCCTTCAGCAGCAGGGACAGGCTGCGTACC +
Preference number: 6 (lower is better)
Translates to: RVDGFSSPCTSP*TPFSSRDRLRT
Trigger: GGTACGCAGCCTGTCCCTGCTGCTGAAGGGCGTGCATGGGCTAGTACAGGGGGATGAGAAGCCATCCACCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000477241.1
ENST00000612395.1
CDS CCA 72 bp CCCGCTGCTTCTCCATCCTCTGGCCCGGGCTCTCAGTaGCGACTCATGCACAGGCTGGGGCTTCCTGTTTCA +
Preference number: 6 (lower is better)
Translates to: PAASPSSGPGSQ*RLMHRLGLPVS
Trigger: TGAAACAGGAAGCCCCAGCCTGTGCATGAGTCGCCACTGAGAGCCCGGGCCAGAGGATGGAGAAGCAGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343063.8
CDS GCA 72 bp TGCAAAGTGCAGGGCCGTGGCCCCCTCATTGTCCCGTaGCGTGAGTCCGATGTCGGTGAATGTGACCAGCCA +
Preference number: 6 (lower is better)
Translates to: CKVQGRGPLIVP*RESDVGECDQP
Trigger: TGGCTGGTCACATTCACCGACATCGGACTCACGGCACGGGACAATGAGGGGGCCACGGCCCTGCACTTTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343063.8
ENST00000409169.5
CDS CCA 72 bp CAAGAAGAAGAAGGGTGTTGCAGAAAGGGCAAGGGCTaGGGAGCAGAGACCCAGAGCCTCGGGGATCCGGCC +
Preference number: 6 (lower is better)
Translates to: QEEEGCCRKGKG*GAETQSLGDPA
Trigger: GGCCGGATCCCCGAGGCTCTGGGTCTCTGCTCCCCAGCCCTTGCCCTTTCTGCAACACCCTTCTTCTTCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423032.1
CDS CCA 72 bp TCCAGAGCAGGTGAAGGGGCTCTGCTCAGAGTCCTCTaGTCAGGTTCACTTCATCCTCCGGCGGAAGCAGCA +
Preference number: 6 (lower is better)
Translates to: SRAGEGALLRVL*SGSLHPPAEAA
Trigger: TGCTGCTTCCGCCGGAGGATGAAGTGAACCTGACCAGAGGACTCTGAGCAGAGCCCCTTCACCTGCTCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477241.1
CDS CCA 72 bp TTGGCACAGGCAGGCATGTGCCACAAATCCGCCAAGTaGAAGGATACGTGGGACCCATGCCTCCAGAGCAGG +
Preference number: 6 (lower is better)
Translates to: LAQAGMCHKSAK*KDTWDPCLQSR
Trigger: CCTGCTCTGGAGGCATGGGTCCCACGTATCCTTCCACTTGGCGGATTTGTGGCACATGCCTGCCTGTGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477241.1
CDS CAA 90 bp GTCTTCCCTGCTAGACGCTGCGCCCAGGAAGGCCTAGAACAACGCTaGGCACAGGCAGGCATGTGCCACAAATCCGCCAAGTGGAAGGAT +
Preference number: 6 (lower is better)
Translates to: VFPARRCAQEGLEQR*AQAGMCHKSAKWKD
Trigger: ATCCTTCCACTTGGCGGATTTGTGGCACATGCCTGCCTGTGCCAAGCGTTGTTCTAGGCCTTCCTGGGCGCAGCGTCTAGCAGGGAAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477241.1
CDS GCA 72 bp CTCATACTCCTGACAGCGGCGCCGAAGCTGCAGGTCTaGAATCTGCTTCTCCAGGTAGACCAGGTCATCCTC +
Preference number: 6 (lower is better)
Translates to: LILLTAAPKLQV*NLLLQVDQVIL
Trigger: GAGGATGACCTGGTCTACCTGGAGAAGCAGATTGCAGACCTGCAGCTTCGGCGCCGCTGTCAGGAGTATGAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343063.8
ENST00000409169.5
ENST00000409506.1
ENST00000477241.1
ENST00000612395.1