Pregenerated sensors for ERVV-2 (Homo sapiens)
Ensembl gene IDs: ENSG00000268964Ensembl transcript IDs: ENST00000601417.3
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | TTAAAGTCATCAAAACAGTACACCCAGAAAGACAGAACAGGGCGGGCTGATCAACTGGGAGGTGGAGGGTaGAGTGAGCCGAGATCGCAC | + |
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Preference number: 2 (lower is better) Translates to: LKSSKQYTQKDRTGRADQLGGGG*SEPRSH Trigger: GTGCGATCTCGGCTCACTGCACCCTCCACCTCCCAG...TTGATCAGCCCGCCCTGTTCTGTCTTTCTGGGTGTACTGTTTTGATGACTTTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| 3UTR-3UTR CCA 90 bp | CCTGCTCATGCCTGCCTACCTGCCTACCCTAATATTTCCCTCCTCAAGAGATGGGTTGTAAGGACGTCGTaGGTCTTCTGTAACTACTTC | + |
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Preference number: 2 (lower is better) Translates to: PAHACLPAYPNISLLKRWVVRTS*VFCNYF Trigger: GAAGTAGTTACAGAAGACCCACGACGTCCTTACAAC...CCATCTCTTGAGGAGGGAAATATTAGGGTAGGCAGGTAGGCAGGCATGAGCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| 3UTR-3UTR TCA 90 bp | TTAAAGTCATCAAAACAGTACACCCAGAAAGACAGAACAGGGCGGGCTGATCAAAACAGGAGAATCAATTaGACCTGGGAGGTGGAGGGT | + |
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Preference number: 2 (lower is better) Translates to: LKSSKQYTQKDRTGRADQNRRIN*TWEVEG Trigger: ACCCTCCACCTCCCAGGTTCAATTGATTCTCCTGTT...TTGATCAGCCCGCCCTGTTCTGTCTTTCTGGGTGTACTGTTTTGATGACTTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| 3UTR-3UTR CCA 90 bp | TTAAAGTCATCAAAACAGTACACCCAGAAAGACAGAACAGGGCGGGCTGATCAAACTCCTACTAATGGCTaGGCAGATGTTTTTATGAGA | + |
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Preference number: 2 (lower is better) Translates to: LKSSKQYTQKDRTGRADQTPTNG*ADVFMR Trigger: TCTCATAAAAACATCTGCCCAGCCATTAGTAGGAGT...TTGATCAGCCCGCCCTGTTCTGTCTTTCTGGGTGTACTGTTTTGATGACTTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| 3UTR-3UTR CAA 90 bp | TTAAAGTCATCAAAACAGTACACCCAGAAAGACAGAACAGGGCGGGCTGATCAATTCCCAAGGGCTCTCTaGCCTGCTCATGCCTGCCTA | + |
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Preference number: 3 (lower is better) Translates to: LKSSKQYTQKDRTGRADQFPRAL*PAHACL Trigger: TAGGCAGGCATGAGCAGGCAAGAGAGCCCTTGGGAA...TTGATCAGCCCGCCCTGTTCTGTCTTTCTGGGTGTACTGTTTTGATGACTTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| 3UTR TCA 72 bp | TACCCTAATATTTCCCTCCTCAAGAGATGGAGACCCTaGAAAGCTCTGGTTGTAAGGACGTCGTGGGTCTTC | + |
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Preference number: 3 (lower is better) Translates to: YPNISLLKRWRP*KALVVRTSWVF Trigger: GAAGACCCACGACGTCCTTACAACCAGAGCTTTTCAGGGTCTCCATCTCTTGAGGAGGGAAATATTAGGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| 3UTR CCA 72 bp | GCTGATCAAAAGGACGTGTCTACTCCTACTAATGGCTaGGCAGATGTTTTTATGAGAACCTTACATGATTTT | + |
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Preference number: 3 (lower is better) Translates to: ADQKDVSTPTNG*ADVFMRTLHDF Trigger: AAAATCATGTAAGGTTCTCATAAAAACATCTGCCCAGCCATTAGTAGGAGTAGACACGTCCTTTTGATCAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| 3UTR TCA 72 bp | TGTCTACTCCTACTAATGGCTGGGCAGATGTTTTTATaGGAACCTTACATGATTTTTCATGAATGTGCCATT | + |
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Preference number: 3 (lower is better) Translates to: CLLLLMAGQMFL*EPYMIFHECAI Trigger: AATGGCACATTCATGAAAAATCATGTAAGGTTCTCATAAAAACATCTGCCCAGCCATTAGTAGGAGTAGACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| CDS-3UTR GCA 90 bp | CCTGCTCATGCCTGCCTACCTGCCTACCCTAATATTTCCCTCCTCAAGAGATGGTCTCTTGCCTGCTCATaGCTGCCTACCTGCCTACCC | + |
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Preference number: 4 (lower is better) Translates to: PAHACLPAYPNISLLKRWSLACS*LPTCLP Trigger: GGGTAGGCAGGTAGGCAGGCATGAGCAGGCAAGAGA...CCATCTCTTGAGGAGGGAAATATTAGGGTAGGCAGGTAGGCAGGCATGAGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| CDS-3UTR GCA 90 bp | CCTGCTCATGCCTGCCTACCTGCCTACCCTAATATTTCCCTCCTCAAGAGATGGAAGGGCTCTCTTGCCTaGTCATGCCTGCCTACCTGC | + |
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Preference number: 4 (lower is better) Translates to: PAHACLPAYPNISLLKRWKGSLA*SCLPTC Trigger: GCAGGTAGGCAGGCATGAGCAGGCAAGAGAGCCCTT...CCATCTCTTGAGGAGGGAAATATTAGGGTAGGCAGGTAGGCAGGCATGAGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| CDS-3UTR GCA 90 bp | AGGAAGCTATCAGTGGGCTGCGTTTCTAAAGATTCCTTTCCCAAGGGCTCTCTTCTGGGAGGTGGAGGGTaGAGTGAGCCGAGATCGCAC | + |
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Preference number: 4 (lower is better) Translates to: RKLSVGCVSKDSFPKGSLLGGGG*SEPRSH Trigger: GTGCGATCTCGGCTCACTGCACCCTCCACCTCCCAG...AAGAGAGCCCTTGGGAAAGGAATCTTTAGAAACGCAGCCCACTGATAGCTTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| CDS-3UTR TCA 90 bp | CCTGCTCATGCCTGCCTACCTGCCTACCCTAATATTTCCCTCCTCAAGAGATGGAAGAGATGGAGACCCTaGAAAGCTCTGGTTGTAAGG | + |
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Preference number: 4 (lower is better) Translates to: PAHACLPAYPNISLLKRWKRWRP*KALVVR Trigger: CCTTACAACCAGAGCTTTTCAGGGTCTCCATCTCTT...CCATCTCTTGAGGAGGGAAATATTAGGGTAGGCAGGTAGGCAGGCATGAGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| CDS-3UTR TCA 90 bp | GCTCATGCCTGCCTACCTGCCTACCCTAATATTTCCCTCCTCAAGAGATGGAGAAACAGGAGAATCAATTaGACCTGGGAGGTGGAGGGT | + |
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Preference number: 4 (lower is better) Translates to: AHACLPAYPNISLLKRWRNRRIN*TWEVEG Trigger: ACCCTCCACCTCCCAGGTTCAATTGATTCTCCTGTT...TCTCCATCTCTTGAGGAGGGAAATATTAGGGTAGGCAGGTAGGCAGGCATGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| CDS-3UTR CCA 90 bp | CCTGCTCATGCCTGCCTACCTGCCTACCCTAATATTTCCCTCCTCAAGAGATGGTCTGTTGTTCTTCTGTaGTTCTTCGGGACCTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: PAHACLPAYPNISLLKRWSVVLL*FFGTFP Trigger: TGGGAAGGTCCCGAAGAACCACAGAAGAACAACAGA...CCATCTCTTGAGGAGGGAAATATTAGGGTAGGCAGGTAGGCAGGCATGAGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| CDS-3UTR CCA 90 bp | CCTGCTCATGCCTGCCTACCTGCCTACCCTAATATTTCCCTCCTCAAGAGATGGCCTTTTCCAAAGTCATaGAGCCACGTAGCCTCATCA | + |
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Preference number: 4 (lower is better) Translates to: PAHACLPAYPNISLLKRWPFPKS*SHVASS Trigger: TGATGAGGCTACGTGGCTCCATGACTTTGGAAAAGG...CCATCTCTTGAGGAGGGAAATATTAGGGTAGGCAGGTAGGCAGGCATGAGCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| CDS-3UTR TCA 90 bp | TTAAAGTCATCAAAACAGTACACCCAGAAAGACAGAACAGGGCGGGCTGATCAAAAGGGACAAACCAGTTaGGGGAGGGGAGGGCAGACT | + |
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Preference number: 4 (lower is better) Translates to: LKSSKQYTQKDRTGRADQKGQTS*GRGGQT Trigger: AGTCTGCCCTCCCCTCCCTCAACTGGTTTGTCCCTT...TTGATCAGCCCGCCCTGTTCTGTCTTTCTGGGTGTACTGTTTTGATGACTTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| CDS-3UTR TCA 90 bp | GCTCATGCCTGCCTACCTGCCTACCCTAATATTTCCCTCCTCAAGAGATGGAGATTATTAGAGAAGTGCTaGCTGTCTGTGGGCAGCATC | + |
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Preference number: 4 (lower is better) Translates to: AHACLPAYPNISLLKRWRLLEKC*LSVGSI Trigger: GATGCTGCCCACAGACAGTCAGCACTTCTCTAATAA...TCTCCATCTCTTGAGGAGGGAAATATTAGGGTAGGCAGGTAGGCAGGCATGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| CDS-3UTR GCA 90 bp | GCTCATGCCTGCCTACCTGCCTACCCTAATATTTCCCTCCTCAAGAGATGGAGAGGATTTATTGATCACTaGACAGACTCCACCCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: AHACLPAYPNISLLKRWRGFIDH*TDSTLL Trigger: GAGCAGGGTGGAGTCTGTGCAGTGATCAATAAATCC...TCTCCATCTCTTGAGGAGGGAAATATTAGGGTAGGCAGGTAGGCAGGCATGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| CDS-3UTR GCA 90 bp | AGGAAGCTATCAGTGGGCTGCGTTTCTAAAGATTCCTTTCCCAAGGGCTCTCTTTTGCCTGCTCATGCCTaGCTACCTGCCTACCCTAAT | + |
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Preference number: 4 (lower is better) Translates to: RKLSVGCVSKDSFPKGSLLPAHA*LPAYPN Trigger: ATTAGGGTAGGCAGGTAGGCAGGCATGAGCAGGCAA...AAGAGAGCCCTTGGGAAAGGAATCTTTAGAAACGCAGCCCACTGATAGCTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| CDS-3UTR GCA 90 bp | TTAAAGTCATCAAAACAGTACACCCAGAAAGACAGAACAGGGCGGGCTGATCAATCCCAAGGGCTCTCTTaGCTGCTCATGCCTGCCTAC | + |
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Preference number: 4 (lower is better) Translates to: LKSSKQYTQKDRTGRADQSQGLS*LLMPAY Trigger: GTAGGCAGGCATGAGCAGGCAAGAGAGCCCTTGGGA...TTGATCAGCCCGCCCTGTTCTGTCTTTCTGGGTGTACTGTTTTGATGACTTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| CDS-3UTR CCA 90 bp | GCTCATGCCTGCCTACCTGCCTACCCTAATATTTCCCTCCTCAAGAGATGGAGAGGTGTGGAAGTCCTCTaGTTCTTGGTCTTCTTGGAT | + |
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Preference number: 4 (lower is better) Translates to: AHACLPAYPNISLLKRWRGVEVL*FLVFLD Trigger: ATCCAAGAAGACCAAGAACCAGAGGACTTCCACACC...TCTCCATCTCTTGAGGAGGGAAATATTAGGGTAGGCAGGTAGGCAGGCATGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| CDS-3UTR CCA 90 bp | AGGAAGCTATCAGTGGGCTGCGTTTCTAAAGATTCCTTTCCCAAGGGCTCTCTTTTACCCAGAGGGGTGTaGAAGTCCTCTGGTTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: RKLSVGCVSKDSFPKGSLLPRGV*KSSGSW Trigger: CCAAGAACCAGAGGACTTCCACACCCCTCTGGGTAA...AAGAGAGCCCTTGGGAAAGGAATCTTTAGAAACGCAGCCCACTGATAGCTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| CDS-3UTR CCA 90 bp | TTAAAGTCATCAAAACAGTACACCCAGAAAGACAGAACAGGGCGGGCTGATCAATCACAGCCTCCCAGATaGCCCTTGCTGAAGCACCTC | + |
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Preference number: 4 (lower is better) Translates to: LKSSKQYTQKDRTGRADQSQPPR*PLLKHL Trigger: GAGGTGCTTCAGCAAGGGCCATCTGGGAGGCTGTGA...TTGATCAGCCCGCCCTGTTCTGTCTTTCTGGGTGTACTGTTTTGATGACTTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| CDS-3UTR CCA 90 bp | AGGAAGCTATCAGTGGGCTGCGTTTCTAAAGATTCCTTTCCCAAGGGCTCTCTTAGTGCTGACTGTCTGTaGGCAGCATCACCAAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: RKLSVGCVSKDSFPKGSLSADCL*AASPRK Trigger: CTTCCTTGGTGATGCTGCCCACAGACAGTCAGCACT...AAGAGAGCCCTTGGGAAAGGAATCTTTAGAAACGCAGCCCACTGATAGCTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| CDS-3UTR TCA 90 bp | GCTCATGCCTGCCTACCTGCCTACCCTAATATTTCCCTCCTCAAGAGATGGAGACCAATGACAGATAGCTaGTATCTTTCCATTTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: AHACLPAYPNISLLKRWRPMTDS*YLSIWG Trigger: CCCCCAAATGGAAAGATATCAGCTATCTGTCATTGG...TCTCCATCTCTTGAGGAGGGAAATATTAGGGTAGGCAGGTAGGCAGGCATGAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| CDS-3UTR TCA 90 bp | AGGAAGCTATCAGTGGGCTGCGTTTCTAAAGATTCCTTTCCCAAGGGCTCTCTTTGCTGGGGCCTCCAATaGCAGATAGCTGATATCTTT | + |
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Preference number: 4 (lower is better) Translates to: RKLSVGCVSKDSFPKGSLCWGLQ*QIADIF Trigger: AAAGATATCAGCTATCTGTCATTGGAGGCCCCAGCA...AAGAGAGCCCTTGGGAAAGGAATCTTTAGAAACGCAGCCCACTGATAGCTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| CDS-3UTR CCA 90 bp | GCTCATGCCTGCCTACCTGCCTACCCTAATATTTCCCTCCTCAAGAGATGGAGAAAGTCCTCTGGTTCTTaGTCTTCTTGGATTCAGTCA | + |
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Preference number: 4 (lower is better) Translates to: AHACLPAYPNISLLKRWRKSSGS*SSWIQS Trigger: TGACTGAATCCAAGAAGACCAAGAACCAGAGGACTT...TCTCCATCTCTTGAGGAGGGAAATATTAGGGTAGGCAGGTAGGCAGGCATGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| CDS-3UTR TCA 90 bp | GCTCATGCCTGCCTACCTGCCTACCCTAATATTTCCCTCCTCAAGAGATGGAGACCAATCTGTTGTCCATaGCTACATTTGCTAGAGAAT | + |
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Preference number: 4 (lower is better) Translates to: AHACLPAYPNISLLKRWRPICCP*LHLLEN Trigger: ATTCTCTAGCAAATGTAGTCATGGACAACAGATTGG...TCTCCATCTCTTGAGGAGGGAAATATTAGGGTAGGCAGGTAGGCAGGCATGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| CDS-3UTR TCA 90 bp | CCTGCTCATGCCTGCCTACCTGCCTACCCTAATATTTCCCTCCTCAAGAGATGGTTACATGATTTTTCATaGATGTGCCATTCAGAAGCG | + |
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Preference number: 4 (lower is better) Translates to: PAHACLPAYPNISLLKRWLHDFS*MCHSEA Trigger: CGCTTCTGAATGGCACATTCATGAAAAATCATGTAA...CCATCTCTTGAGGAGGGAAATATTAGGGTAGGCAGGTAGGCAGGCATGAGCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| CDS-3UTR TCA 90 bp | AGGAAGCTATCAGTGGGCTGCGTTTCTAAAGATTCCTTTCCCAAGGGCTCTCTTGACTTTAGTTTTGGGTaGACAGAGAGAAGGCTTTAC | + |
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Preference number: 4 (lower is better) Translates to: RKLSVGCVSKDSFPKGSLDFSFG*TERRLY Trigger: GTAAAGCCTTCTCTCTGTTCACCCAAAACTAAAGTC...AAGAGAGCCCTTGGGAAAGGAATCTTTAGAAACGCAGCCCACTGATAGCTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| CDS-3UTR GCA 90 bp | TTAAAGTCATCAAAACAGTACACCCAGAAAGACAGAACAGGGCGGGCTGATCAAAGGGTCTCCCTCTCTTaGTCTGTCTCAGAGAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: LKSSKQYTQKDRTGRADQRVSLS*SVSERK Trigger: TTTTCTCTCTGAGACAGAGCAAGAGAGGGAGACCCT...TTGATCAGCCCGCCCTGTTCTGTCTTTCTGGGTGTACTGTTTTGATGACTTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| CDS-3UTR CCA 90 bp | AGGAAGCTATCAGTGGGCTGCGTTTCTAAAGATTCCTTTCCCAAGGGCTCTCTTAGAAATGTTGATAGCTaGATAACCAGGCGAGGTAAC | + |
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Preference number: 4 (lower is better) Translates to: RKLSVGCVSKDSFPKGSLRNVDS*ITRRGN Trigger: GTTACCTCGCCTGGTTATCCAGCTATCAACATTTCT...AAGAGAGCCCTTGGGAAAGGAATCTTTAGAAACGCAGCCCACTGATAGCTTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| CDS-3UTR CCA 90 bp | AGGAAGCTATCAGTGGGCTGCGTTTCTAAAGATTCCTTTCCCAAGGGCTCTCTTGAGCTCTTTTCTGTCTaGGTTGGGTGGTGTTATAAA | + |
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Preference number: 4 (lower is better) Translates to: RKLSVGCVSKDSFPKGSLELFSV*VGWCYK Trigger: TTTATAACACCACCCAACCCAGACAGAAAAGAGCTC...AAGAGAGCCCTTGGGAAAGGAATCTTTAGAAACGCAGCCCACTGATAGCTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| CDS-3UTR CCA 90 bp | AGGAAGCTATCAGTGGGCTGCGTTTCTAAAGATTCCTTTCCCAAGGGCTCTCTTCAAGGAAGCTATCAGTaGGCTGCGTTTCTAAAGATT | + |
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Preference number: 4 (lower is better) Translates to: RKLSVGCVSKDSFPKGSLQGSYQ*AAFLKI Trigger: AATCTTTAGAAACGCAGCCCACTGATAGCTTCCTTG...AAGAGAGCCCTTGGGAAAGGAATCTTTAGAAACGCAGCCCACTGATAGCTTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| CDS-3UTR GCA 90 bp | AGGAAGCTATCAGTGGGCTGCGTTTCTAAAGATTCCTTTCCCAAGGGCTCTCTTAAGCTATCAGTGGGCTaGGTTTCTAAAGATTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: RKLSVGCVSKDSFPKGSLKLSVG*VSKDSF Trigger: AAAGGAATCTTTAGAAACGCAGCCCACTGATAGCTT...AAGAGAGCCCTTGGGAAAGGAATCTTTAGAAACGCAGCCCACTGATAGCTTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| CDS-3UTR CCA 90 bp | TTAAAGTCATCAAAACAGTACACCCAGAAAGACAGAACAGGGCGGGCTGATCAAGGTTCTTGGTCTTCTTaGATTCAGTCAAGAGATGCG | + |
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Preference number: 4 (lower is better) Translates to: LKSSKQYTQKDRTGRADQGSWSS*IQSRDA Trigger: CGCATCTCTTGACTGAATCCAAGAAGACCAAGAACC...TTGATCAGCCCGCCCTGTTCTGTCTTTCTGGGTGTACTGTTTTGATGACTTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| CDS-3UTR CCA 90 bp | AGGAAGCTATCAGTGGGCTGCGTTTCTAAAGATTCCTTTCCCAAGGGCTCTCTTACTCCTACTAATGGCTaGGCAGATGTTTTTATGAGA | + |
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Preference number: 4 (lower is better) Translates to: RKLSVGCVSKDSFPKGSLTPTNG*ADVFMR Trigger: TCTCATAAAAACATCTGCCCAGCCATTAGTAGGAGT...AAGAGAGCCCTTGGGAAAGGAATCTTTAGAAACGCAGCCCACTGATAGCTTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| CDS-3UTR CCA 90 bp | TTAAAGTCATCAAAACAGTACACCCAGAAAGACAGAACAGGGCGGGCTGATCAAAAGGCTGTTCTAGGATaGGTTATTAGAGAAGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: LKSSKQYTQKDRTGRADQKAVLG*VIREVL Trigger: CAGCACTTCTCTAATAACCCATCCTAGAACAGCCTT...TTGATCAGCCCGCCCTGTTCTGTCTTTCTGGGTGTACTGTTTTGATGACTTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| CDS-3UTR GCA 90 bp | TTAAAGTCATCAAAACAGTACACCCAGAAAGACAGAACAGGGCGGGCTGATCAAGAGTTAAAGGGTAAATaGCCTTCATTTAAAGAGACA | + |
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Preference number: 4 (lower is better) Translates to: LKSSKQYTQKDRTGRADQELKGK*PSFKET Trigger: TGTCTCTTTAAATGAAGGGCATTTACCCTTTAACTC...TTGATCAGCCCGCCCTGTTCTGTCTTTCTGGGTGTACTGTTTTGATGACTTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| CDS-3UTR CAA 90 bp | CCTGCTCATGCCTGCCTACCTGCCTACCCTAATATTTCCCTCCTCAAGAGATGGTTCCCAAGGGCTCTCTaGCCTGCTCATGCCTGCCTA | + |
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Preference number: 5 (lower is better) Translates to: PAHACLPAYPNISLLKRWFPRAL*PAHACL Trigger: TAGGCAGGCATGAGCAGGCAAGAGAGCCCTTGGGAA...CCATCTCTTGAGGAGGGAAATATTAGGGTAGGCAGGTAGGCAGGCATGAGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| CDS-3UTR CAA 90 bp | CCTGCTCATGCCTGCCTACCTGCCTACCCTAATATTTCCCTCCTCAAGAGATGGCAGGGTCTCCCTCTCTaGCTCTGTCTCAGAGAGAAA | + |
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Preference number: 5 (lower is better) Translates to: PAHACLPAYPNISLLKRWQGLPL*LCLREK Trigger: TTTCTCTCTGAGACAGAGCAAGAGAGGGAGACCCTG...CCATCTCTTGAGGAGGGAAATATTAGGGTAGGCAGGTAGGCAGGCATGAGCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| CDS-3UTR CAA 90 bp | CCTGCTCATGCCTGCCTACCTGCCTACCCTAATATTTCCCTCCTCAAGAGATGGAAACAGGAGAATCAATaGAACCTGGGAGGTGGAGGG | + |
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Preference number: 5 (lower is better) Translates to: PAHACLPAYPNISLLKRWKQENQ*NLGGGG Trigger: CCCTCCACCTCCCAGGTTCAATTGATTCTCCTGTTT...CCATCTCTTGAGGAGGGAAATATTAGGGTAGGCAGGTAGGCAGGCATGAGCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| CDS-3UTR CAA 90 bp | TTAAAGTCATCAAAACAGTACACCCAGAAAGACAGAACAGGGCGGGCTGATCAAGCCGAGATCGCACCATaGTACTCCAGCCTGGGAGAC | + |
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Preference number: 5 (lower is better) Translates to: LKSSKQYTQKDRTGRADQAEIAP*YSSLGD Trigger: GTCTCCCAGGCTGGAGTACAATGGTGCGATCTCGGC...TTGATCAGCCCGCCCTGTTCTGTCTTTCTGGGTGTACTGTTTTGATGACTTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| CDS-3UTR CAA 90 bp | TTAAAGTCATCAAAACAGTACACCCAGAAAGACAGAACAGGGCGGGCTGATCAAAAAGGGACAAACCAGTaGAGGGAGGGGAGGGCAGAC | + |
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Preference number: 5 (lower is better) Translates to: LKSSKQYTQKDRTGRADQKGTNQ*REGRAD Trigger: GTCTGCCCTCCCCTCCCTCAACTGGTTTGTCCCTTT...TTGATCAGCCCGCCCTGTTCTGTCTTTCTGGGTGTACTGTTTTGATGACTTTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| CDS-3UTR CAA 90 bp | AGGAAGCTATCAGTGGGCTGCGTTTCTAAAGATTCCTTTCCCAAGGGCTCTCTTGAAGTCCTCTGGTTCTaGGTCTTCTTGGATTCAGTC | + |
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Preference number: 5 (lower is better) Translates to: RKLSVGCVSKDSFPKGSLEVLWF*VFLDSV Trigger: GACTGAATCCAAGAAGACCAAGAACCAGAGGACTTC...AAGAGAGCCCTTGGGAAAGGAATCTTTAGAAACGCAGCCCACTGATAGCTTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| CDS-3UTR CAA 90 bp | GCTCATGCCTGCCTACCTGCCTACCCTAATATTTCCCTCCTCAAGAGATGGAGAAGATTGACTTTAGTTTaGGGTGAACAGAGAGAAGGC | + |
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Preference number: 5 (lower is better) Translates to: AHACLPAYPNISLLKRWRRLTLV*GEQREG Trigger: GCCTTCTCTCTGTTCACCCAAAACTAAAGTCAATCT...TCTCCATCTCTTGAGGAGGGAAATATTAGGGTAGGCAGGTAGGCAGGCATGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| CDS-3UTR CAA 90 bp | GCTCATGCCTGCCTACCTGCCTACCCTAATATTTCCCTCCTCAAGAGATGGAGATCTTTTCTGTCTGGGTaGGGTGGTGTTATAAATGGT | + |
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Preference number: 5 (lower is better) Translates to: AHACLPAYPNISLLKRWRSFLSG*GGVING Trigger: ACCATTTATAACACCACCCAACCCAGACAGAAAAGA...TCTCCATCTCTTGAGGAGGGAAATATTAGGGTAGGCAGGTAGGCAGGCATGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| CDS-3UTR CAA 90 bp | CCTGCTCATGCCTGCCTACCTGCCTACCCTAATATTTCCCTCCTCAAGAGATGGGGACTTCATGTGAAATaGCTTTATCCTAGAAGAGAC | + |
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Preference number: 5 (lower is better) Translates to: PAHACLPAYPNISLLKRWGLHVK*LYPRRD Trigger: GTCTCTTCTAGGATAAAGCAATTTCACATGAAGTCC...CCATCTCTTGAGGAGGGAAATATTAGGGTAGGCAGGTAGGCAGGCATGAGCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| CDS CCA 90 bp | ATGTTACCCAGAGGGGTGTGGAAGTCCTCTGGTTCTTGGTCTTCTTaGATTCAGTCAAGAGATGCGCAGAAAGAGTTAAAGGGTAAATGC | + |
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Preference number: 5 (lower is better) Translates to: MLPRGVWKSSGSWSS*IQSRDAQKELKGKC Trigger: GCATTTACCCTTTAACTCTTTCTGCGCATCTCTTGACTGAATCCAAGAAGACCAAGAACCAGAGGACTTCCACACCCCTCTGGGTAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| CDS-3UTR CAA 90 bp | AGGAAGCTATCAGTGGGCTGCGTTTCTAAAGATTCCTTTCCCAAGGGCTCTCTTTGGTTCTTGGTCTTCTaGGATTCAGTCAAGAGATGC | + |
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Preference number: 5 (lower is better) Translates to: RKLSVGCVSKDSFPKGSLWFLVF*DSVKRC Trigger: GCATCTCTTGACTGAATCCAAGAAGACCAAGAACCA...AAGAGAGCCCTTGGGAAAGGAATCTTTAGAAACGCAGCCCACTGATAGCTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| CDS-3UTR CAA 90 bp | AGGAAGCTATCAGTGGGCTGCGTTTCTAAAGATTCCTTTCCCAAGGGCTCTCTTAGCTATGTTGTCTATTaGTCTGGAGAGATTTCTGAG | + |
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Preference number: 5 (lower is better) Translates to: RKLSVGCVSKDSFPKGSLSYVVY*SGEISE Trigger: CTCAGAAATCTCTCCAGACAAATAGACAACATAGCT...AAGAGAGCCCTTGGGAAAGGAATCTTTAGAAACGCAGCCCACTGATAGCTTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| CDS TCA 72 bp | GAGGGCAGACTTCACAGCCTCCCAGATGGCCCTTGCTaGAGCACCTCCTTTTCCAAAGTCATGGAGCCACGT | + |
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Preference number: 6 (lower is better) Translates to: EGRLHSLPDGPC*STSFSKVMEPR Trigger: ACGTGGCTCCATGACTTTGGAAAAGGAGGTGCTTCAGCAAGGGCCATCTGGGAGGCTGTGAAGTCTGCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| CDS CAA 72 bp | GATGTTACCCAGAGGGGTGTGGAAGTCCTCTGGTTCTaGGTCTTCTTGGATTCAGTCAAGAGATGCGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: DVTQRGVEVLWF*VFLDSVKRCAE Trigger: TTCTGCGCATCTCTTGACTGAATCCAAGAAGACCAAGAACCAGAGGACTTCCACACCCCTCTGGGTAACATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| CDS GCA 72 bp | ACATGGGGCGAAGAAGTCATCAGGGTCTCCCTCTCTTaGTCTGTCTCAGAGAGAAAATTCCTCCATAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: TWGEEVIRVSLS*SVSERKFLHSF Trigger: GAAACTATGGAGGAATTTTCTCTCTGAGACAGAGCAAGAGAGGGAGACCCTGATGACTTCTTCGCCCCATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| CDS CCA 72 bp | AGAGGGGTGTGGAAGTCCTCTGGTTCTTGGTCTTCTTaGATTCAGTCAAGAGATGCGCAGAAAGAGTTAAAG | + |
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Preference number: 6 (lower is better) Translates to: RGVWKSSGSWSS*IQSRDAQKELK Trigger: CTTTAACTCTTTCTGCGCATCTCTTGACTGAATCCAAGAAGACCAAGAACCAGAGGACTTCCACACCCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| CDS CAA 72 bp | CAGAGGGGTGTGGAAGTCCTCTGGTTCTTGGTCTTCTaGGATTCAGTCAAGAGATGCGCAGAAAGAGTTAAA | + |
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Preference number: 6 (lower is better) Translates to: QRGVEVLWFLVF*DSVKRCAERVK Trigger: TTTAACTCTTTCTGCGCATCTCTTGACTGAATCCAAGAAGACCAAGAACCAGAGGACTTCCACACCCCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| CDS CAA 72 bp | TCCATGACTACATTTGCTAGAGAATCTATGGAGGCCTaGAGTTTAGAGATGCTATCTCTGGTACTCTTAGCT | + |
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Preference number: 6 (lower is better) Translates to: SMTTFARESMEA*SLEMLSLVLLA Trigger: AGCTAAGAGTACCAGAGATAGCATCTCTAAACTCAAGGCCTCCATAGATTCTCTAGCAAATGTAGTCATGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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| CDS CAA 90 bp | AATCTGTTGTCCATGACTACATTTGCTAGAGAATCTATGGAGGCCTaGAGTTTAGAGATGCTATCTCTGGTACTCTTAGCTATGTTGTCT | + |
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Preference number: 6 (lower is better) Translates to: NLLSMTTFARESMEA*SLEMLSLVLLAMLS Trigger: AGACAACATAGCTAAGAGTACCAGAGATAGCATCTCTAAACTCAAGGCCTCCATAGATTCTCTAGCAAATGTAGTCATGGACAACAGATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601417.3 |
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