Pregenerated sensors for ERVV-1 (Homo sapiens)
Ensembl gene IDs: ENSG00000269526Ensembl transcript IDs: ENST00000602168.1
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GGAGGCCATCAGCGGGCTGCATTTCTAAAGATTCCTTTCCCAGGGGCTTCCTTGAGGGTCTCCCTCTCTTaGTCTCTGTCAGGGAAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: GGHQRAAFLKIPFPGASLRVSLS*SLSGKE Trigger: CTCCTTCCCTGACAGAGAGCAAGAGAGGGAGACCCT...CAAGGAAGCCCCTGGGAAAGGAATCTTTAGAAATGCAGCCCGCTGATGGCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602168.1 |
||
| 3UTR-3UTR TCA 90 bp | TCCTACCTTGGTAACCTCTGGCTGGGCCTTGATAAGTTCCCTTCTGGAACAGAGCGCTCCTCCTTTTGCTaGCTCAGCGTGCAGCGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: SYLGNLWLGLDKFPSGTERSSFC*LSVQRF Trigger: GAAACGCTGCACGCTGAGTCAGCAAAAGGAGGAGCG...CTCTGTTCCAGAAGGGAACTTATCAAGGCCCAGCCAGAGGTTACCAAGGTAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602168.1 |
||
| 3UTR-3UTR GCA 90 bp | TCCTACCTTGGTAACCTCTGGCTGGGCCTTGATAAGTTCCCTTCTGGAACAGAGTCCCAGGGGCTTCCTTaGCTGCTCTTGTCTGGCTAC | + |
|
Preference number: 2 (lower is better) Translates to: SYLGNLWLGLDKFPSGTESQGLP*LLLSGY Trigger: GTAGCCAGACAAGAGCAGGCAAGGAAGCCCCTGGGA...CTCTGTTCCAGAAGGGAACTTATCAAGGCCCAGCCAGAGGTTACCAAGGTAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602168.1 |
||
| 3UTR-3UTR TCA 90 bp | AGTGTAGCCACGCTCCTCCTTTTGCTGACTCAGCGTGCAGCGTTTCCAAGGAGGAAGAGTTGGAGACCCTaGAAAGCTTTGGGCATAAGG | + |
|
Preference number: 2 (lower is better) Translates to: SVATLLLLLTQRAAFPRRKSWRP*KALGIR Trigger: CCTTATGCCCAAAGCTTTTCAGGGTCTCCAACTCTT...CCTCCTTGGAAACGCTGCACGCTGAGTCAGCAAAAGGAGGAGCGTGGCTACACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602168.1 |
||
| 3UTR-3UTR CCA 90 bp | AAGTATACATGCTTCTTAGTGGGGAATAGCTCCTACCTTGGTAACCTCTGGCTGGGCATAAGGACGTCGTaGGTCTTCTGTAACTACTTC | + |
|
Preference number: 2 (lower is better) Translates to: KYTCFLVGNSSYLGNLWLGIRTS*VFCNYF Trigger: GAAGTAGTTACAGAAGACCCACGACGTCCTTATGCC...CAGCCAGAGGTTACCAAGGTAGGAGCTATTCCCCACTAAGAAGCATGTATACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602168.1 |
||
| 3UTR GCA 72 bp | CAGTGTAGCCACGCTCCTCCTTTTGCTGACTCAGCGTaGAGCGTTTCCAAGGAGGCCATCAGCGGGCTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: QCSHAPPFADSA*SVSKEAISGLH Trigger: ATGCAGCCCGCTGATGGCCTCCTTGGAAACGCTGCACGCTGAGTCAGCAAAAGGAGGAGCGTGGCTACACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602168.1 |
||
| 3UTR GCA 72 bp | ACGTGGGACGAAGAAGTCATCAGGGTCTCCCTCTCTTaGTCTCTGTCAGGGAAGGAGCCCCTCCGTAGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: TWDEEVIRVSLS*SLSGKEPLRSC Trigger: GCAACTACGGAGGGGCTCCTTCCCTGACAGAGAGCAAGAGAGGGAGACCCTGATGACTTCTTCGTCCCACGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602168.1 |
||
| 3UTR-3UTR CAA 90 bp | ATAGCTCCTACCTTGGTAACCTCTGGCTGGGCCTTGATAAGTTCCCTTCTGGAAGCCACGCTCCTCCTTTaGCTGACTCAGCGTGCAGCG | + |
|
Preference number: 3 (lower is better) Translates to: IAPTLVTSGWALISSLLEATLLL*LTQRAA Trigger: CGCTGCACGCTGAGTCAGCAAAAGGAGGAGCGTGGC...TTCCAGAAGGGAACTTATCAAGGCCCAGCCAGAGGTTACCAAGGTAGGAGCTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602168.1 |
||
| 3UTR-3UTR CAA 90 bp | ATAGCTCCTACCTTGGTAACCTCTGGCTGGGCCTTGATAAGTTCCCTTCTGGAACTTCCTTGCCTGCTCTaGTCTGGCTACCTGCCTACC | + |
|
Preference number: 3 (lower is better) Translates to: IAPTLVTSGWALISSLLELPCLL*SGYLPT Trigger: GGTAGGCAGGTAGCCAGACAAGAGCAGGCAAGGAAG...TTCCAGAAGGGAACTTATCAAGGCCCAGCCAGAGGTTACCAAGGTAGGAGCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602168.1 |
||
| 3UTR-3UTR CAA 90 bp | TCCTACCTTGGTAACCTCTGGCTGGGCCTTGATAAGTTCCCTTCTGGAACAGAGATTCCCCCTCAAGAGTaGGAGACCCTGAAAAGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: SYLGNLWLGLDKFPSGTEIPPQE*ETLKSF Trigger: AAAGCTTTTCAGGGTCTCCAACTCTTGAGGGGGAAT...CTCTGTTCCAGAAGGGAACTTATCAAGGCCCAGCCAGAGGTTACCAAGGTAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000602168.1 |
||
| 3UTR-3UTR CAA 90 bp | AAGTATACATGCTTCTTAGTGGGGAATAGCTCCTACCTTGGTAACCTCTGGCTGGGGCTCTGTGTGAAATaGCCATATCCTGGAAGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: KYTCFLVGNSSYLGNLWLGLCVK*PYPGRD Trigger: GTCTCTTCCAGGATATGGCAATTTCACACAGAGCCC...CAGCCAGAGGTTACCAAGGTAGGAGCTATTCCCCACTAAGAAGCATGTATACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602168.1 |
||
| CDS-3UTR TCA 90 bp | CTTGGTAACCTCTGGCTGGGCCTTGATAAGTTCCCTTCTGGAACAGAGGAATGCCGCTCCTCCTTTTGCTaGCTCAGCGTGCAGCGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LGNLWLGLDKFPSGTEECRSSFC*LSVQRF Trigger: GAAACGCTGCACGCTGAGTCAGCAAAAGGAGGAGCG...GCATTCCTCTGTTCCAGAAGGGAACTTATCAAGGCCCAGCCAGAGGTTACCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602168.1 |
||
| CDS-3UTR CCA 90 bp | AGTGTAGCCACGCTCCTCCTTTTGCTGACTCAGCGTGCAGCGTTTCCAAGGAGGTCACAGCCTCCCAAATaGACCCTGCTGAATCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: SVATLLLLLTQRAAFPRRSQPPK*TLLNHL Trigger: AAGGTGATTCAGCAGGGTCCATTTGGGAGGCTGTGA...CCTCCTTGGAAACGCTGCACGCTGAGTCAGCAAAAGGAGGAGCGTGGCTACACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602168.1 |
||
| CDS-3UTR GCA 90 bp | GTGCAGCGTTTCCAAGGAGGCCATCAGCGGGCTGCATTTCTAAAGATTCCTTTCGAGCCCCTCCGTAGTTaGAGAATCTTTGCCCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: VQRFQGGHQRAAFLKIPFEPLRS*RIFAHW Trigger: CCAGTGGGCAAAGATTCTGCAACTACGGAGGGGCTC...GAAAGGAATCTTTAGAAATGCAGCCCGCTGATGGCCTCCTTGGAAACGCTGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602168.1 |
||
| CDS-3UTR GCA 90 bp | TACCTTGGTAACCTCTGGCTGGGCCTTGATAAGTTCCCTTCTGGAACAGAGGAAAGGGGCTTCCTTGCCTaGTCTTGTCTGGCTACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: YLGNLWLGLDKFPSGTEERGFLA*SCLATC Trigger: GCAGGTAGCCAGACAAGAGCAGGCAAGGAAGCCCCT...TTCCTCTGTTCCAGAAGGGAACTTATCAAGGCCCAGCCAGAGGTTACCAAGGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602168.1 |
||
| CDS-3UTR GCA 90 bp | ATAGCTCCTACCTTGGTAACCTCTGGCTGGGCCTTGATAAGTTCCCTTCTGGAATCCCAGGGGCTTCCTTaGCTGCTCTTGTCTGGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: IAPTLVTSGWALISSLLESQGLP*LLLSGY Trigger: GTAGCCAGACAAGAGCAGGCAAGGAAGCCCCTGGGA...TTCCAGAAGGGAACTTATCAAGGCCCAGCCAGAGGTTACCAAGGTAGGAGCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602168.1 |
||
| 3UTR CAA 72 bp | GGAATAGCTCCTACCTTGGTAACCTCTGGCTGGGCCTaGATAAGTTCCCTTCTGGAACAGAGGAATGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GIAPTLVTSGWA*ISSLLEQRNAA Trigger: GGCTGCATTCCTCTGTTCCAGAAGGGAACTTATCAAGGCCCAGCCAGAGGTTACCAAGGTAGGAGCTATTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602168.1 |
||
| CDS-3UTR CCA 90 bp | TCTTGCTCTCTGTCAGGGAAGGAGCCCCTCCGTAGTTGCAGAATCTTTGCCCACGGCATAAGGACGTCGTaGGTCTTCTGTAACTACTTC | + |
|
Preference number: 4 (lower is better) Translates to: SCSLSGKEPLRSCRIFAHGIRTS*VFCNYF Trigger: GAAGTAGTTACAGAAGACCCACGACGTCCTTATGCC...GTGGGCAAAGATTCTGCAACTACGGAGGGGCTCCTTCCCTGACAGAGAGCAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602168.1 |
||
| CDS-3UTR GCA 90 bp | TCTTGCTCTCTGTCAGGGAAGGAGCCCCTCCGTAGTTGCAGAATCTTTGCCCACATATGTACTTGTAGGTaGTGGGACCTCCAAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SCSLSGKEPLRSCRIFAHICTCR*WDLQGR Trigger: TCTTCCTTGGAGGTCCCAGCACCTACAAGTACATAT...GTGGGCAAAGATTCTGCAACTACGGAGGGGCTCCTTCCCTGACAGAGAGCAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602168.1 |
||
| CDS-3UTR GCA 90 bp | TACCCTAACAGTATTCCCCCTCAAGAGTTGGAGACCCTGAAAAGCTTTGGGCATAGGGTCTCCCTCTCTTaGTCTCTGTCAGGGAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: YPNSIPPQELETLKSFGHRVSLS*SLSGKE Trigger: CTCCTTCCCTGACAGAGAGCAAGAGAGGGAGACCCT...ATGCCCAAAGCTTTTCAGGGTCTCCAACTCTTGAGGGGGAATACTGTTAGGGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000602168.1 |
||
| CDS-3UTR TCA 90 bp | TCCTACCTTGGTAACCTCTGGCTGGGCCTTGATAAGTTCCCTTCTGGAACAGAGAAGAGTTGGAGACCCTaGAAAGCTTTGGGCATAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SYLGNLWLGLDKFPSGTEKSWRP*KALGIR Trigger: CCTTATGCCCAAAGCTTTTCAGGGTCTCCAACTCTT...CTCTGTTCCAGAAGGGAACTTATCAAGGCCCAGCCAGAGGTTACCAAGGTAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602168.1 |
||
| CDS-3UTR GCA 90 bp | TTAGTGGGGAATAGCTCCTACCTTGGTAACCTCTGGCTGGGCCTTGATAAGTTCGGATTTACTGATCACTaGACAGACTCCACCCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LVGNSSYLGNLWLGLDKFGFTDH*TDSTLL Trigger: GAGCAGGGTGGAGTCTGTGCAGTGATCAGTAAATCC...GAACTTATCAAGGCCCAGCCAGAGGTTACCAAGGTAGGAGCTATTCCCCACTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602168.1 |
||
| CDS-3UTR TCA 90 bp | GATGATCTCTTTCCATTTTTAGGGGCTCTGTGTGAAATTGCCATATCCTGGAAGAAGGGACAAACCATGTaGGGGAGGGGAGGGCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: DDLFPFLGALCEIAISWKKGQTM*GRGGQT Trigger: AGTCTGCCCTCCCCTCCCTCACATGGTTTGTCCCTT...CTTCCAGGATATGGCAATTTCACACAGAGCCCCTAAAAATGGAAAGAGATCATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000602168.1 |
||
| CDS-3UTR CCA 90 bp | TACCTTGGTAACCTCTGGCTGGGCCTTGATAAGTTCCCTTCTGGAACAGAGGAATGTACTTGTAGGTGCTaGGACCTCCAAGGAAGATTG | + |
|
Preference number: 4 (lower is better) Translates to: YLGNLWLGLDKFPSGTEECTCRC*DLQGRL Trigger: CAATCTTCCTTGGAGGTCCCAGCACCTACAAGTACA...TTCCTCTGTTCCAGAAGGGAACTTATCAAGGCCCAGCCAGAGGTTACCAAGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602168.1 |
||
| CDS-3UTR TCA 90 bp | ATAGCTCCTACCTTGGTAACCTCTGGCTGGGCCTTGATAAGTTCCCTTCTGGAACCAAATGGACCCTGCTaGATCACCTTTTCCAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: IAPTLVTSGWALISSLLEPNGPC*ITFSKV Trigger: AACTTTGGAAAAGGTGATTCAGCAGGGTCCATTTGG...TTCCAGAAGGGAACTTATCAAGGCCCAGCCAGAGGTTACCAAGGTAGGAGCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602168.1 |
||
| CDS-3UTR GCA 90 bp | CTCTTTCCATTTTTAGGGGCTCTGTGTGAAATTGCCATATCCTGGAAGAGACATTTTGCTGACTCAGCGTaGAGCGTTTCCAAGGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LFPFLGALCEIAISWKRHFADSA*SVSKEA Trigger: GGCCTCCTTGGAAACGCTGCACGCTGAGTCAGCAAA...ATGTCTCTTCCAGGATATGGCAATTTCACACAGAGCCCCTAAAAATGGAAAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000602168.1 |
||
| CDS-3UTR GCA 90 bp | CTTGGTAACCTCTGGCTGGGCCTTGATAAGTTCCCTTCTGGAACAGAGGAATGCTTAGAGAAGTATACATaGTTCTTAGTGGGGAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: LGNLWLGLDKFPSGTEECLEKYT*FLVGNS Trigger: GCTATTCCCCACTAAGAAGCATGTATACTTCTCTAA...GCATTCCTCTGTTCCAGAAGGGAACTTATCAAGGCCCAGCCAGAGGTTACCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602168.1 |
||
| CDS-3UTR TCA 90 bp | TTAGTGGGGAATAGCTCCTACCTTGGTAACCTCTGGCTGGGCCTTGATAAGTTCCCAATCTGTTGTTCATaGCTACATTTGCTAGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LVGNSSYLGNLWLGLDKFPICCS*LHLLEN Trigger: ATTCTCTAGCAAATGTAGTCATGAACAACAGATTGG...GAACTTATCAAGGCCCAGCCAGAGGTTACCAAGGTAGGAGCTATTCCCCACTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602168.1 |
||
| CDS-3UTR TCA 90 bp | CTCTTTCCATTTTTAGGGGCTCTGTGTGAAATTGCCATATCCTGGAAGAGACATTGCAACAGGATTTACTaGTCACTGCACAGACTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LFPFLGALCEIAISWKRHCNRIY*SLHRLH Trigger: GTGGAGTCTGTGCAGTGATCAGTAAATCCTGTTGCA...ATGTCTCTTCCAGGATATGGCAATTTCACACAGAGCCCCTAAAAATGGAAAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000602168.1 |
||
| CDS-3UTR GCA 90 bp | GATGATCTCTTTCCATTTTTAGGGGCTCTGTGTGAAATTGCCATATCCTGGAAGAGGCCATCAGCGGGCTaGATTTCTAAAGATTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: DDLFPFLGALCEIAISWKRPSAG*ISKDSF Trigger: AAAGGAATCTTTAGAAATGCAGCCCGCTGATGGCCT...CTTCCAGGATATGGCAATTTCACACAGAGCCCCTAAAAATGGAAAGAGATCATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000602168.1 |
||
| CDS-3UTR CAA 90 bp | GGAGGCCATCAGCGGGCTGCATTTCTAAAGATTCCTTTCCCAGGGGCTTCCTTGCTTCCTTGCCTGCTCTaGTCTGGCTACCTGCCTACC | + |
|
Preference number: 5 (lower is better) Translates to: GGHQRAAFLKIPFPGASLLPCLL*SGYLPT Trigger: GGTAGGCAGGTAGCCAGACAAGAGCAGGCAAGGAAG...CAAGGAAGCCCCTGGGAAAGGAATCTTTAGAAATGCAGCCCGCTGATGGCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602168.1 |
||
| CDS-3UTR CAA 90 bp | TTAGTGGGGAATAGCTCCTACCTTGGTAACCTCTGGCTGGGCCTTGATAAGTTCGCCACGCTCCTCCTTTaGCTGACTCAGCGTGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: LVGNSSYLGNLWLGLDKFATLLL*LTQRAA Trigger: CGCTGCACGCTGAGTCAGCAAAAGGAGGAGCGTGGC...GAACTTATCAAGGCCCAGCCAGAGGTTACCAAGGTAGGAGCTATTCCCCACTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602168.1 |
||
| CDS-3UTR CAA 90 bp | TCTTGCTCTCTGTCAGGGAAGGAGCCCCTCCGTAGTTGCAGAATCTTTGCCCACATTCCCCCTCAAGAGTaGGAGACCCTGAAAAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SCSLSGKEPLRSCRIFAHIPPQE*ETLKSF Trigger: AAAGCTTTTCAGGGTCTCCAACTCTTGAGGGGGAAT...GTGGGCAAAGATTCTGCAACTACGGAGGGGCTCCTTCCCTGACAGAGAGCAAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000602168.1 |
||
| CDS-3UTR CAA 90 bp | TCCTACCTTGGTAACCTCTGGCTGGGCCTTGATAAGTTCCCTTCTGGAACAGAGACCTCTGGCTGGGCCTaGATAAGTTCCCTTCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SYLGNLWLGLDKFPSGTETSGWA*ISSLLE Trigger: TTCCAGAAGGGAACTTATCAAGGCCCAGCCAGAGGT...CTCTGTTCCAGAAGGGAACTTATCAAGGCCCAGCCAGAGGTTACCAAGGTAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602168.1 |
||
| CDS-3UTR CAA 90 bp | AAGTATACATGCTTCTTAGTGGGGAATAGCTCCTACCTTGGTAACCTCTGGCTGGGAATAGCTCCTACCTaGGTAACCTCTGGCTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: KYTCFLVGNSSYLGNLWLGIAPT*VTSGWA Trigger: GGCCCAGCCAGAGGTTACCAAGGTAGGAGCTATTCC...CAGCCAGAGGTTACCAAGGTAGGAGCTATTCCCCACTAAGAAGCATGTATACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602168.1 |
||
| CDS-3UTR CAA 90 bp | GATGATCTCTTTCCATTTTTAGGGGCTCTGTGTGAAATTGCCATATCCTGGAAGCAGGGTCTCCCTCTCTaGCTCTCTGTCAGGGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: DDLFPFLGALCEIAISWKQGLPL*LSVREG Trigger: TCCTTCCCTGACAGAGAGCAAGAGAGGGAGACCCTG...CTTCCAGGATATGGCAATTTCACACAGAGCCCCTAAAAATGGAAAGAGATCATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000602168.1 |
||
| CDS-3UTR CAA 90 bp | GATGATCTCTTTCCATTTTTAGGGGCTCTGTGTGAAATTGCCATATCCTGGAAGGGGCTCTGTGTGAAATaGCCATATCCTGGAAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: DDLFPFLGALCEIAISWKGLCVK*PYPGRD Trigger: GTCTCTTCCAGGATATGGCAATTTCACACAGAGCCC...CTTCCAGGATATGGCAATTTCACACAGAGCCCCTAAAAATGGAAAGAGATCATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000602168.1 |
||
| CDS CCA 72 bp | TCTGAGGGTGACATCATGATAAGTGAACCCTCCCCATaGGGCGATCATTCCTATGGCCGCACCCATCCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SEGDIMISEPSP*GDHSYGRTHPC Trigger: GCAGGGATGGGTGCGGCCATAGGAATGATCGCCCCATGGGGAGGGTTCACTTATCATGATGTCACCCTCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602168.1 |
||
| CDS TCA 72 bp | GAGGGCAGACTTCACAGCCTCCCAAATGGACCCTGCTaGATCACCTTTTCCAAAGTTATGGAGCCACGTAAC | + |
|
Preference number: 6 (lower is better) Translates to: EGRLHSLPNGPC*ITFSKVMEPRN Trigger: GTTACGTGGCTCCATAACTTTGGAAAAGGTGATTCAGCAGGGTCCATTTGGGAGGCTGTGAAGTCTGCCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602168.1 |
||
| CDS CCA 72 bp | GTATTAGACCCAGAGCTCTTTTCTGTCTGGGTTGGGTaGTGTTATAAATGGTCACACCTATCCCCCGTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: VLDPELFSVWVG*CYKWSHLSPVV Trigger: GACCACGGGGGATAGGTGTGACCATTTATAACACCACCCAACCCAGACAGAAAAGAGCTCTGGGTCTAATAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000602168.1 |
||
| CDS CCA 72 bp | TCCCTGCCAGTATTAGACCCAGAGCTCTTTTCTGTCTaGGTTGGGTGGTGTTATAAATGGTCACACCTATCC | + |
|
Preference number: 6 (lower is better) Translates to: SLPVLDPELFSV*VGWCYKWSHLS Trigger: GGATAGGTGTGACCATTTATAACACCACCCAACCCAGACAGAAAAGAGCTCTGGGTCTAATACTGGCAGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602168.1 |
||
| CDS CAA 72 bp | GATGCTATCTCTGGTACTCTTAGCTATGTTGTCTATTaGTCTGGAGAGATTTCTGAGGGTGACATCATGATA | + |
|
Preference number: 6 (lower is better) Translates to: DAISGTLSYVVY*SGEISEGDIMI Trigger: TATCATGATGTCACCCTCAGAAATCTCTCCAGACAAATAGACAACATAGCTAAGAGTACCAGAGATAGCATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602168.1 |
||
| CDS CAA 72 bp | TTCATGACTACATTTGCTAGAGAATCTATGGAGGCCTaGAGTTTAGAGATGCTATCTCTGGTACTCTTAGCT | + |
|
Preference number: 6 (lower is better) Translates to: FMTTFARESMEA*SLEMLSLVLLA Trigger: AGCTAAGAGTACCAGAGATAGCATCTCTAAACTCAAGGCCTCCATAGATTCTCTAGCAAATGTAGTCATGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602168.1 |
||
| CDS CAA 90 bp | AATCTGTTGTTCATGACTACATTTGCTAGAGAATCTATGGAGGCCTaGAGTTTAGAGATGCTATCTCTGGTACTCTTAGCTATGTTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: NLLFMTTFARESMEA*SLEMLSLVLLAMLS Trigger: AGACAACATAGCTAAGAGTACCAGAGATAGCATCTCTAAACTCAAGGCCTCCATAGATTCTCTAGCAAATGTAGTCATGAACAACAGATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602168.1 |
||