Pregenerated sensors for ERVK3-1 (Homo sapiens)
Ensembl gene IDs: ENSG00000142396Ensembl transcript IDs: ENST00000413518.5, ENST00000427361.5, ENST00000434052.5, ENST00000590505.1, ENST00000608004.1, ENST00000608070.5, ENST00000609864.5, ENST00000610038.5
Found 147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACACACCTGAGGTCACACCTGCACATACAGGTGGCATCAACACATaGAGGACTGTCGCGGTTGCTTCTGGACCGAACGAAGGACGACGA | + |
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Preference number: 1 (lower is better) Translates to: HTPEVTPAHTGGINT*RTVAVASGPNEGRR Trigger: TCGTCGTCCTTCGTTCGGTCCAGAAGCAACCGCGACAGTCCTGCATGTGTTGATGCCACCTGTATGTGCAGGTGTGACCTCAGGTGTGTG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413518.5 |
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| 3UTR GCA 90 bp | ACCTGCACATACAGGTGGCATCAACACATGCAGGACTGTCGCGGTTaGTTCTGGACCGAACGAAGGACGACGAATGCAGAAATGAGACAG | + |
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Preference number: 1 (lower is better) Translates to: TCTYRWHQHMQDCRG*FWTERRTTNAEMRQ Trigger: CTGTCTCATTTCTGCATTCGTCGTCCTTCGTTCGGTCCAGAAGCAACCGCGACAGTCCTGCATGTGTTGATGCCACCTGTATGTGCAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413518.5 |
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| 3UTR TCA 90 bp | CTGGCGGCAGACAGAGTTTGTCAGTTCGCCAACATCCTGCTTTCATaGGAACAGTTTGCTGTTTGCTCACAGAGCCTCCAGTGGTATACT | + |
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Preference number: 1 (lower is better) Translates to: LAADRVCQFANILLS*EQFAVCSQSLQWYT Trigger: AGTATACCACTGGAGGCTCTGTGAGCAAACAGCAAACTGTTCTCATGAAAGCAGGATGTTGGCGAACTGACAAACTCTGTCTGCCGCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000413518.5 ENST00000427361.5 |
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| 3UTR CCA 90 bp | ACATACAGGTGGCATCAACACATGCAGGACTGTCGCGGTTGCTTCTaGACCGAACGAAGGACGACGAATGCAGAAATGAGACAGACAAAA | + |
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Preference number: 1 (lower is better) Translates to: TYRWHQHMQDCRGCF*TERRTTNAEMRQTK Trigger: TTTTGTCTGTCTCATTTCTGCATTCGTCGTCCTTCGTTCGGTCCAGAAGCAACCGCGACAGTCCTGCATGTGTTGATGCCACCTGTATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413518.5 |
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| 3UTR GCA 90 bp | GTGTCCAGAAGAGGCAAATCTAGACATATAACGTGGATTAGTGGTTaGCAGAGGCTGGAGGAAGAGCGAATAGGCAGTGATGATAAGGGG | + |
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Preference number: 1 (lower is better) Translates to: VSRRGKSRHITWISG*QRLEEERIGSDDKG Trigger: CCCCTTATCATCACTGCCTATTCGCTCTTCCTCCAGCCTCTGGCAACCACTAATCCACGTTATATGTCTAGATTTGCCTCTTCTGGACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413518.5 |
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| 3UTR-3UTR GCA 90 bp | AGGTGGCATCAACACATGCAGGACTGTCGCGGTTGCTTCTGGACCGAACGAAGGGACCTGGGACATGACTaGCCCCAGCATTCCTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: RWHQHMQDCRGCFWTERRDLGHD*PQHSFW Trigger: CCAGAAGGAATGCTGGGGGCAGTCATGTCCCAGGTC...CCTTCGTTCGGTCCAGAAGCAACCGCGACAGTCCTGCATGTGTTGATGCCACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413518.5 |
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| 3UTR-3UTR GCA 90 bp | GACCTGGGACATGACTGCCCCCAGCATTCCTTCTGGCGGCAGACAGAGTTTGTCGAACAGTTTGCTGTTTaGTCACAGAGCCTCCAGTGG | + |
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Preference number: 2 (lower is better) Translates to: DLGHDCPQHSFWRQTEFVEQFAV*SQSLQW Trigger: CCACTGGAGGCTCTGTGAGCAAACAGCAAACTGTTC...GACAAACTCTGTCTGCCGCCAGAAGGAATGCTGGGGGCAGTCATGTCCCAGGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000413518.5 ENST00000427361.5 |
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| 3UTR CAA 90 bp | CACCTGCACATACAGGTGGCATCAACACATGCAGGACTGTCGCGGTaGCTTCTGGACCGAACGAAGGACGACGAATGCAGAAATGAGACA | + |
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Preference number: 2 (lower is better) Translates to: HLHIQVASTHAGLSR*LLDRTKDDECRNET Trigger: TGTCTCATTTCTGCATTCGTCGTCCTTCGTTCGGTCCAGAAGCAACCGCGACAGTCCTGCATGTGTTGATGCCACCTGTATGTGCAGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413518.5 |
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| 3UTR-3UTR GCA 90 bp | ATGACTGCCCCCAGCATTCCTTCTGGCGGCAGACAGAGTTTGTCAGTTCGCCAAGAACAGTTTGCTGTTTaGTCACAGAGCCTCCAGTGG | + |
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Preference number: 2 (lower is better) Translates to: MTAPSIPSGGRQSLSVRQEQFAV*SQSLQW Trigger: CCACTGGAGGCTCTGTGAGCAAACAGCAAACTGTTC...TTGGCGAACTGACAAACTCTGTCTGCCGCCAGAAGGAATGCTGGGGGCAGTCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000413518.5 ENST00000427361.5 |
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| 3UTR-3UTR TCA 90 bp | CTGAGGTCACACCTGCACATACAGGTGGCATCAACACATGCAGGACTGTCGCGGCGACGAATGCAGAAATaGGACAGACAAAAGGATCTG | + |
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Preference number: 2 (lower is better) Translates to: LRSHLHIQVASTHAGLSRRRMQK*DRQKDL Trigger: CAGATCCTTTTGTCTGTCTCATTTCTGCATTCGTCG...CCGCGACAGTCCTGCATGTGTTGATGCCACCTGTATGTGCAGGTGTGACCTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413518.5 |
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| 3UTR-3UTR TCA 90 bp | ACCTGCACATACAGGTGGCATCAACACATGCAGGACTGTCGCGGTTGCTTCTGGTGTCGGTCAGCTATTTaGTTTAACACAGGCCCACAT | + |
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Preference number: 2 (lower is better) Translates to: TCTYRWHQHMQDCRGCFWCRSAI*FNTGPH Trigger: ATGTGGGCCTGTGTTAAATCAAATAGCTGACCGACA...CCAGAAGCAACCGCGACAGTCCTGCATGTGTTGATGCCACCTGTATGTGCAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413518.5 |
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| 3UTR-3UTR GCA 90 bp | GGGCTCCTTGATATTAGGGAACAGGGACCTGAGCTTTTACAGCCCTTCATATTTGACCTGGGACATGACTaGCCCCAGCATTCCTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: GLLDIREQGPELLQPFIFDLGHD*PQHSFW Trigger: CCAGAAGGAATGCTGGGGGCAGTCATGTCCCAGGTC...AAATATGAAGGGCTGTAAAAGCTCAGGTCCCTGTTCCCTAATATCAAGGAGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000413518.5 ENST00000427361.5 |
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| 3UTR-3UTR CCA 90 bp | AGGTGGCATCAACACATGCAGGACTGTCGCGGTTGCTTCTGGACCGAACGAAGGTTGTTCAACAGGTTCTaGATGTTCCTGTGGATAACC | + |
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Preference number: 2 (lower is better) Translates to: RWHQHMQDCRGCFWTERRLFNRF*MFLWIT Trigger: GGTTATCCACAGGAACATCCAGAACCTGTTGAACAA...CCTTCGTTCGGTCCAGAAGCAACCGCGACAGTCCTGCATGTGTTGATGCCACCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413518.5 |
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| 3UTR-3UTR CCA 90 bp | CATATAACGTGGATTAGTGGTTGCCAGAGGCTGGAGGAAGAGCGAATAGGCAGTACCTGCACATACAGGTaGCATCAACACATGCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: HITWISGCQRLEEERIGSTCTYR*HQHMQD Trigger: GTCCTGCATGTGTTGATGCCACCTGTATGTGCAGGT...ACTGCCTATTCGCTCTTCCTCCAGCCTCTGGCAACCACTAATCCACGTTATATG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413518.5 |
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| 3UTR-3UTR CCA 90 bp | GTCAGGGGGCTCCTTGATATTAGGGAACAGGGACCTGAGCTTTTACAGCCCTTCTTGTTCAACAGGTTCTaGATGTTCCTGTGGATAACC | + |
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Preference number: 2 (lower is better) Translates to: VRGLLDIREQGPELLQPFLFNRF*MFLWIT Trigger: GGTTATCCACAGGAACATCCAGAACCTGTTGAACAA...GAAGGGCTGTAAAAGCTCAGGTCCCTGTTCCCTAATATCAAGGAGCCCCCTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000413518.5 ENST00000427361.5 |
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| 3UTR-3UTR GCA 90 bp | AGACATATAACGTGGATTAGTGGTTGCCAGAGGCTGGAGGAAGAGCGAATAGGCACGAAGGACGACGAATaGAGAAATGAGACAGACAAA | + |
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Preference number: 2 (lower is better) Translates to: RHITWISGCQRLEEERIGTKDDE*RNETDK Trigger: TTTGTCTGTCTCATTTCTGCATTCGTCGTCCTTCGT...GCCTATTCGCTCTTCCTCCAGCCTCTGGCAACCACTAATCCACGTTATATGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413518.5 |
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| 3UTR TCA 72 bp | CTGTGGATAACCTCAAGGAGCACGGGACCTGGGACATaGCTGCCCCCAGCATTCCTTCTGGCGGCAGACAGA | + |
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Preference number: 3 (lower is better) Translates to: LWITSRSTGPGT*LPPAFLLAADR Trigger: TCTGTCTGCCGCCAGAAGGAATGCTGGGGGCAGTCATGTCCCAGGTCCCGTGCTCCTTGAGGTTATCCACAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000413518.5 ENST00000427361.5 |
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| 3UTR-3UTR CAA 90 bp | ATACAGGTGGCATCAACACATGCAGGACTGTCGCGGTTGCTTCTGGACCGAACGGGGTCAGGGGGCTCCTaGATATTAGGGAACAGGGAC | + |
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Preference number: 3 (lower is better) Translates to: IQVASTHAGLSRLLLDRTGSGGS*ILGNRD Trigger: GTCCCTGTTCCCTAATATCAAGGAGCCCCCTGACCC...CGTTCGGTCCAGAAGCAACCGCGACAGTCCTGCATGTGTTGATGCCACCTGTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000413518.5 |
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| 3UTR GCA 72 bp | GAGGTCACACCTGCACATACAGGTGGCATCAACACATaGAGGACTGTCGCGGTTGCTTCTGGACCGAACGAA | + |
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Preference number: 3 (lower is better) Translates to: EVTPAHTGGINT*RTVAVASGPNE Trigger: TTCGTTCGGTCCAGAAGCAACCGCGACAGTCCTGCATGTGTTGATGCCACCTGTATGTGCAGGTGTGACCTC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413518.5 |
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| 3UTR GCA 72 bp | TACAGGTGGCATCAACACATGCAGGACTGTCGCGGTTaGTTCTGGACCGAACGAAGGACGACGAATGCAGAA | + |
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Preference number: 3 (lower is better) Translates to: YRWHQHMQDCRG*FWTERRTTNAE Trigger: TTCTGCATTCGTCGTCCTTCGTTCGGTCCAGAAGCAACCGCGACAGTCCTGCATGTGTTGATGCCACCTGTA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413518.5 |
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| 3UTR TCA 72 bp | GTTTGCTGTTTGCTCACAGAGCCTCCAGTGGTATACTaGGTTGGTCACGACCCTCATTCCTTCGGCCTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: VCCLLTEPPVVY*VGHDPHSFGLQ Trigger: TTGGAGGCCGAAGGAATGAGGGTCGTGACCAACTCAGTATACCACTGGAGGCTCTGTGAGCAAACAGCAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000413518.5 ENST00000427361.5 |
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| 3UTR CCA 72 bp | CTGTTTGCTCACAGAGCCTCCAGTGGTATACTGAGTTaGTCACGACCCTCATTCCTTCGGCCTCCAACATCT | + |
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Preference number: 3 (lower is better) Translates to: LFAHRASSGILS*SRPSFLRPPTS Trigger: AGATGTTGGAGGCCGAAGGAATGAGGGTCGTGACCAACTCAGTATACCACTGGAGGCTCTGTGAGCAAACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000413518.5 ENST00000427361.5 |
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| 3UTR CCA 72 bp | TGGCATCAACACATGCAGGACTGTCGCGGTTGCTTCTaGACCGAACGAAGGACGACGAATGCAGAAATGAGA | + |
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Preference number: 3 (lower is better) Translates to: WHQHMQDCRGCF*TERRTTNAEMR Trigger: TCTCATTTCTGCATTCGTCGTCCTTCGTTCGGTCCAGAAGCAACCGCGACAGTCCTGCATGTGTTGATGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413518.5 |
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| 3UTR TCA 72 bp | GACAGAGTTTGTCAGTTCGCCAACATCCTGCTTTCATaGGAACAGTTTGCTGTTTGCTCACAGAGCCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: DRVCQFANILLS*EQFAVCSQSLQ Trigger: CTGGAGGCTCTGTGAGCAAACAGCAAACTGTTCTCATGAAAGCAGGATGTTGGCGAACTGACAAACTCTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000413518.5 ENST00000427361.5 |
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| 3UTR GCA 72 bp | TGGCGGCAGACAGAGTTTGTCAGTTCGCCAACATCCTaGTTTCATGAGAACAGTTTGCTGTTTGCTCACAGA | + |
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Preference number: 3 (lower is better) Translates to: WRQTEFVSSPTS*FHENSLLFAHR Trigger: TCTGTGAGCAAACAGCAAACTGTTCTCATGAAAGCAGGATGTTGGCGAACTGACAAACTCTGTCTGCCGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000413518.5 ENST00000427361.5 |
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| 3UTR TCA 72 bp | GCTTCTGGACCGAACGAAGGACGACGAATGCAGAAATaGGACAGACAAAAGGATCTGTTTGAAAGAAGGGGT | + |
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Preference number: 3 (lower is better) Translates to: ASGPNEGRRMQK*DRQKDLFERRG Trigger: ACCCCTTCTTTCAAACAGATCCTTTTGTCTGTCTCATTTCTGCATTCGTCGTCCTTCGTTCGGTCCAGAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413518.5 |
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| 3UTR GCA 72 bp | TCGCGGTTGCTTCTGGACCGAACGAAGGACGACGAATaGAGAAATGAGACAGACAAAAGGATCTGTTTGAAA | + |
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Preference number: 3 (lower is better) Translates to: SRLLLDRTKDDE*RNETDKRICLK Trigger: TTTCAAACAGATCCTTTTGTCTGTCTCATTTCTGCATTCGTCGTCCTTCGTTCGGTCCAGAAGCAACCGCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413518.5 |
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| 3UTR GCA 72 bp | AGAGGCAAATCTAGACATATAACGTGGATTAGTGGTTaGCAGAGGCTGGAGGAAGAGCGAATAGGCAGTGAT | + |
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Preference number: 3 (lower is better) Translates to: RGKSRHITWISG*QRLEEERIGSD Trigger: ATCACTGCCTATTCGCTCTTCCTCCAGCCTCTGGCAACCACTAATCCACGTTATATGTCTAGATTTGCCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413518.5 |
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| CDS-3UTR CCA 90 bp | GTCAGGGGGCTCCTTGATATTAGGGAACAGGGACCTGAGCTTTTACAGCCCTTCGTACGCACTTCCGCCTaGTGGCCAGCGGCCGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: VRGLLDIREQGPELLQPFVRTSA*WPAAAQ Trigger: CTGGGCGGCCGCTGGCCACCAGGCGGAAGTGCGTAC...GAAGGGCTGTAAAAGCTCAGGTCCCTGTTCCCTAATATCAAGGAGCCCCCTGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000413518.5 |
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| CDS-3UTR CCA 90 bp | CACGGGACCTGGGACATGACTGCCCCCAGCATTCCTTCTGGCGGCAGACAGAGTACGGTTGCTTCACTGTaGCAGCCTCCTCAGAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: HGTWDMTAPSIPSGGRQSTVASL*QPPQRA Trigger: GGCTCTCTGAGGAGGCTGCCACAGTGAAGCAACCGT...ACTCTGTCTGCCGCCAGAAGGAATGCTGGGGGCAGTCATGTCCCAGGTCCCGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000413518.5 ENST00000427361.5 |
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| CDS-3UTR CCA 90 bp | GATTTAACACAGGCCCACATGATTCCTTTCTTTGTTCAACAGGTTCTGGATGTTCGCACTTCCGCCTGGTaGCCAGCGGCCGCCCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: DLTQAHMIPFFVQQVLDVRTSAW*PAAAQD Trigger: GTCCTGGGCGGCCGCTGGCCACCAGGCGGAAGTGCG...AACATCCAGAACCTGTTGAACAAAGAAAGGAATCATGTGGGCCTGTGTTAAATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413518.5 |
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| CDS-3UTR CCA 90 bp | CTGAGGTCACACCTGCACATACAGGTGGCATCAACACATGCAGGACTGTCGCGGGCATGGCCAAGAACATaGAGTCAGGGGTTTTTGCCT | + |
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Preference number: 4 (lower is better) Translates to: LRSHLHIQVASTHAGLSRAWPRT*SQGFLP Trigger: AGGCAAAAACCCCTGACTCCATGTTCTTGGCCATGC...CCGCGACAGTCCTGCATGTGTTGATGCCACCTGTATGTGCAGGTGTGACCTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000413518.5 |
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| 3UTR CAA 72 bp | GCTGTTTGCTCACAGAGCCTCCAGTGGTATACTGAGTaGGTCACGACCCTCATTCCTTCGGCCTCCAACATC | + |
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Preference number: 4 (lower is better) Translates to: AVCSQSLQWYTE*VTTLIPSASNI Trigger: GATGTTGGAGGCCGAAGGAATGAGGGTCGTGACCAACTCAGTATACCACTGGAGGCTCTGTGAGCAAACAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000413518.5 ENST00000427361.5 |
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| 3UTR CAA 72 bp | ATACAGGTGGCATCAACACATGCAGGACTGTCGCGGTaGCTTCTGGACCGAACGAAGGACGACGAATGCAGA | + |
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Preference number: 4 (lower is better) Translates to: IQVASTHAGLSR*LLDRTKDDECR Trigger: TCTGCATTCGTCGTCCTTCGTTCGGTCCAGAAGCAACCGCGACAGTCCTGCATGTGTTGATGCCACCTGTAT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413518.5 |
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| CDS-3UTR GCA 90 bp | AGACATATAACGTGGATTAGTGGTTGCCAGAGGCTGGAGGAAGAGCGAATAGGCGACCTGGGACATGACTaGCCCCAGCATTCCTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: RHITWISGCQRLEEERIGDLGHD*PQHSFW Trigger: CCAGAAGGAATGCTGGGGGCAGTCATGTCCCAGGTC...GCCTATTCGCTCTTCCTCCAGCCTCTGGCAACCACTAATCCACGTTATATGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413518.5 |
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| CDS-3UTR CCA 90 bp | GACTGCCCCCAGCATTCCTTCTGGCGGCAGACAGAGTTTGTCAGTTCGCCAACAACACTACAGCTAGCATaGCCAAGAACATGGAGTCAG | + |
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Preference number: 4 (lower is better) Translates to: DCPQHSFWRQTEFVSSPTTLQLA*PRTWSQ Trigger: CTGACTCCATGTTCTTGGCCATGCTAGCTGTAGTGT...TGTTGGCGAACTGACAAACTCTGTCTGCCGCCAGAAGGAATGCTGGGGGCAGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000413518.5 ENST00000427361.5 |
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| 3UTR CAA 72 bp | ACTGCCCCCAGCATTCCTTCTGGCGGCAGACAGAGTTaGTCAGTTCGCCAACATCCTGCTTTCATGAGAACA | + |
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Preference number: 4 (lower is better) Translates to: TAPSIPSGGRQS*SVRQHPAFMRT Trigger: TGTTCTCATGAAAGCAGGATGTTGGCGAACTGACAAACTCTGTCTGCCGCCAGAAGGAATGCTGGGGGCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000413518.5 ENST00000427361.5 |
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| CDS-3UTR TCA 90 bp | GACCTGGGACATGACTGCCCCCAGCATTCCTTCTGGCGGCAGACAGAGTTTGTCAACATCCTGCTTTCATaGGAACAGTTTGCTGTTTGC | + |
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Preference number: 4 (lower is better) Translates to: DLGHDCPQHSFWRQTEFVNILLS*EQFAVC Trigger: GCAAACAGCAAACTGTTCTCATGAAAGCAGGATGTT...GACAAACTCTGTCTGCCGCCAGAAGGAATGCTGGGGGCAGTCATGTCCCAGGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000413518.5 ENST00000427361.5 |
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| CDS-3UTR GCA 90 bp | GACCGAACGAAGGACGACGAATGCAGAAATGAGACAGACAAAAGGATCTGTTTGGAGCGTCTTACACACTaGCGCCGGCACTTCCGGTAC | + |
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Preference number: 4 (lower is better) Translates to: DRTKDDECRNETDKRICLERLTH*RRHFRY Trigger: GTACCGGAAGTGCCGGCGGCAGTGTGTAAGACGCTC...CAAACAGATCCTTTTGTCTGTCTCATTTCTGCATTCGTCGTCCTTCGTTCGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413518.5 |
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| CDS-3UTR GCA 90 bp | GTTCGCCAACATCCTGCTTTCATGAGAACAGTTTGCTGTTTGCTCACAGAGCCTGACCTGGGACATGACTaGCCCCAGCATTCCTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: VRQHPAFMRTVCCLLTEPDLGHD*PQHSFW Trigger: CCAGAAGGAATGCTGGGGGCAGTCATGTCCCAGGTC...AGGCTCTGTGAGCAAACAGCAAACTGTTCTCATGAAAGCAGGATGTTGGCGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000413518.5 ENST00000427361.5 |
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| CDS-3UTR TCA 90 bp | GAGGTCACACCTGCACATACAGGTGGCATCAACACATGCAGGACTGTCGCGGTTCTTGTGTCGTTTTCTTaGTCTGTCCCCATGTTATGG | + |
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Preference number: 4 (lower is better) Translates to: EVTPAHTGGINTCRTVAVLVSFS*SVPMLW Trigger: CCATAACATGGGGACAGATCAAGAAAACGACACAAG...AACCGCGACAGTCCTGCATGTGTTGATGCCACCTGTATGTGCAGGTGTGACCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413518.5 |
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| CDS-3UTR TCA 90 bp | AGACATATAACGTGGATTAGTGGTTGCCAGAGGCTGGAGGAAGAGCGAATAGGCGGATACTCACACACCTaGGGTCACACCTGCACATAC | + |
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Preference number: 4 (lower is better) Translates to: RHITWISGCQRLEEERIGGYSHT*GHTCTY Trigger: GTATGTGCAGGTGTGACCTCAGGTGTGTGAGTATCC...GCCTATTCGCTCTTCCTCCAGCCTCTGGCAACCACTAATCCACGTTATATGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413518.5 |
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| CDS-3UTR GCA 90 bp | AGTGGTATACTGAGTTGGTCACGACCCTCATTCCTTCGGCCTCCAACATCTCCCCCCTTGTTCTGTCTTTaGATTCAGATTCCGCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: SGILSWSRPSFLRPPTSPPLFCL*IQIPLA Trigger: AGCCAGCGGAATCTGAATGCAAAGACAGAACAAGGG...GGGAGATGTTGGAGGCCGAAGGAATGAGGGTCGTGACCAACTCAGTATACCACT 51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENST00000413518.5 ENST00000427361.5 |
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| CDS-3UTR CCA 90 bp | TCCAGTGGTATACTGAGTTGGTCACGACCCTCATTCCTTCGGCCTCCAACATCTTCACTTTCTCTGCTCTaGCAGACCTTCCTCGTTCAG | + |
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Preference number: 4 (lower is better) Translates to: SSGILSWSRPSFLRPPTSSLSLL*QTFLVQ Trigger: CTGAACGAGGAAGGTCTGCCAGAGCAGAGAAAGTGA...AGATGTTGGAGGCCGAAGGAATGAGGGTCGTGACCAACTCAGTATACCACTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000413518.5 ENST00000427361.5 |
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| CDS-3UTR CCA 90 bp | GTCAGGGGGCTCCTTGATATTAGGGAACAGGGACCTGAGCTTTTACAGCCCTTCACACTACAGCTAGCATaGCCAAGAACATGGAGTCAG | + |
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Preference number: 4 (lower is better) Translates to: VRGLLDIREQGPELLQPFTLQLA*PRTWSQ Trigger: CTGACTCCATGTTCTTGGCCATGCTAGCTGTAGTGT...GAAGGGCTGTAAAAGCTCAGGTCCCTGTTCCCTAATATCAAGGAGCCCCCTGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000413518.5 ENST00000427361.5 |
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| CDS-3UTR CCA 90 bp | GTTCGCCAACATCCTGCTTTCATGAGAACAGTTTGCTGTTTGCTCACAGAGCCTCCCCAGCATTCCTTCTaGCGGCAGACAGAGTTTGTC | + |
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Preference number: 4 (lower is better) Translates to: VRQHPAFMRTVCCLLTEPPQHSF*RQTEFV Trigger: GACAAACTCTGTCTGCCGCCAGAAGGAATGCTGGGG...AGGCTCTGTGAGCAAACAGCAAACTGTTCTCATGAAAGCAGGATGTTGGCGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000413518.5 ENST00000427361.5 |
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| CDS-3UTR TCA 90 bp | CTCCAGTGGTATACTGAGTTGGTCACGACCCTCATTCCTTCGGCCTCCAACATCCTTGTGTCGTTTTCTTaGTCTGTCCCCATGTTATGG | + |
|
Preference number: 4 (lower is better) Translates to: LQWYTELVTTLIPSASNILVSFS*SVPMLW Trigger: CCATAACATGGGGACAGATCAAGAAAACGACACAAG...GATGTTGGAGGCCGAAGGAATGAGGGTCGTGACCAACTCAGTATACCACTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000413518.5 ENST00000427361.5 |
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| CDS-3UTR GCA 90 bp | TCCTTCTGGCGGCAGACAGAGTTTGTCAGTTCGCCAACATCCTGCTTTCATGAGCCCTTGTTCTGTCTTTaGATTCAGATTCCGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SFWRQTEFVSSPTSCFHEPLFCL*IQIPLA Trigger: AGCCAGCGGAATCTGAATGCAAAGACAGAACAAGGG...CTCATGAAAGCAGGATGTTGGCGAACTGACAAACTCTGTCTGCCGCCAGAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000413518.5 ENST00000427361.5 |
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| CDS-3UTR CCA 90 bp | GAGGTCACACCTGCACATACAGGTGGCATCAACACATGCAGGACTGTCGCGGTTTTGTTCAACAGGTTCTaGATGTTCCTGTGGATAACC | + |
|
Preference number: 4 (lower is better) Translates to: EVTPAHTGGINTCRTVAVLFNRF*MFLWIT Trigger: GGTTATCCACAGGAACATCCAGAACCTGTTGAACAA...AACCGCGACAGTCCTGCATGTGTTGATGCCACCTGTATGTGCAGGTGTGACCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413518.5 |
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| CDS-3UTR CCA 90 bp | TCCAGTGGTATACTGAGTTGGTCACGACCCTCATTCCTTCGGCCTCCAACATCTCGGTCTCCCGTTCCATaGTCACACACACCTTATATT | + |
|
Preference number: 4 (lower is better) Translates to: SSGILSWSRPSFLRPPTSRSPVP*SHTPYI Trigger: AATATAAGGTGTGTGTGACCATGGAACGGGAGACCG...AGATGTTGGAGGCCGAAGGAATGAGGGTCGTGACCAACTCAGTATACCACTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427361.5 |
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| CDS-3UTR TCA 90 bp | GGGATACTCACACACCTGAGGTCACACCTGCACATACAGGTGGCATCAACACATTGTCGGTCAGCTATTTaGTTTAACACAGGCCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: GILTHLRSHLHIQVASTHCRSAI*FNTGPH Trigger: ATGTGGGCCTGTGTTAAATCAAATAGCTGACCGACA...ATGTGTTGATGCCACCTGTATGTGCAGGTGTGACCTCAGGTGTGTGAGTATCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413518.5 |
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| CDS-3UTR TCA 90 bp | AGGTGGCATCAACACATGCAGGACTGTCGCGGTTGCTTCTGGACCGAACGAAGGAGCCATAAAGAGGAATaGAAAACTGATACATGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: RWHQHMQDCRGCFWTERRSHKEE*KTDTCY Trigger: GTAGCATGTATCAGTTTTTCATTCCTCTTTATGGCT...CCTTCGTTCGGTCCAGAAGCAACCGCGACAGTCCTGCATGTGTTGATGCCACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413518.5 |
||
| CDS-3UTR GCA 90 bp | GTTCGCCAACATCCTGCTTTCATGAGAACAGTTTGCTGTTTGCTCACAGAGCCTGAACAGTTTGCTGTTTaGTCACAGAGCCTCCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VRQHPAFMRTVCCLLTEPEQFAV*SQSLQW Trigger: CCACTGGAGGCTCTGTGAGCAAACAGCAAACTGTTC...AGGCTCTGTGAGCAAACAGCAAACTGTTCTCATGAAAGCAGGATGTTGGCGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000413518.5 ENST00000427361.5 |
||
| CDS-3UTR CCA 90 bp | AACACAGGCCCACATGATTCCTTTCTTTGTTCAACAGGTTCTGGATGTTCCTGTCCCCAGCATTCCTTCTaGCGGCAGACAGAGTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: NTGPHDSFLCSTGSGCSCPQHSF*RQTEFV Trigger: GACAAACTCTGTCTGCCGCCAGAAGGAATGCTGGGG...ACAGGAACATCCAGAACCTGTTGAACAAAGAAAGGAATCATGTGGGCCTGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000413518.5 ENST00000427361.5 |
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| CDS-3UTR CCA 90 bp | TGGTATACTGAGTTGGTCACGACCCTCATTCCTTCGGCCTCCAACATCTCCCCTTTGTTCAACAGGTTCTaGATGTTCCTGTGGATAACC | + |
|
Preference number: 4 (lower is better) Translates to: WYTELVTTLIPSASNISPLFNRF*MFLWIT Trigger: GGTTATCCACAGGAACATCCAGAACCTGTTGAACAA...AGGGGAGATGTTGGAGGCCGAAGGAATGAGGGTCGTGACCAACTCAGTATACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000413518.5 ENST00000427361.5 |
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| CDS-3UTR TCA 90 bp | GTCAGGGGGCTCCTTGATATTAGGGAACAGGGACCTGAGCTTTTACAGCCCTTCATGACTCCATTTATATaGAGTGTCCAGAAGAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VRGLLDIREQGPELLQPFMTPFI*SVQKRQ Trigger: TTGCCTCTTCTGGACACTTCATATAAATGGAGTCAT...GAAGGGCTGTAAAAGCTCAGGTCCCTGTTCCCTAATATCAAGGAGCCCCCTGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000413518.5 |
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| CDS-3UTR GCA 90 bp | ACACAGGCCCACATGATTCCTTTCTTTGTTCAACAGGTTCTGGATGTTCCTGTGCAGTTTCACTTTCTCTaGTCTGGCAGACCTTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: TQAHMIPFFVQQVLDVPVQFHFL*SGRPSS Trigger: CGAGGAAGGTCTGCCAGAGCAGAGAAAGTGAAACTG...CACAGGAACATCCAGAACCTGTTGAACAAAGAAAGGAATCATGTGGGCCTGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000413518.5 ENST00000427361.5 |
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| CDS-3UTR CCA 90 bp | ACTGTCGGTCAGCTATTTGATTTAACACAGGCCCACATGATTCCTTTCTTTGTTACGGTTGCTTCACTGTaGCAGCCTCCTCAGAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TVGQLFDLTQAHMIPFFVTVASL*QPPQRA Trigger: GGCTCTCTGAGGAGGCTGCCACAGTGAAGCAACCGT...AACAAAGAAAGGAATCATGTGGGCCTGTGTTAAATCAAATAGCTGACCGACAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000413518.5 ENST00000427361.5 |
||
| CDS-3UTR TCA 90 bp | AACAGTTTGCTGTTTGCTCACAGAGCCTCCAGTGGTATACTGAGTTGGTCACGACGACGAATGCAGAAATaGGACAGACAAAAGGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: NSLLFAHRASSGILSWSRRRMQK*DRQKDL Trigger: CAGATCCTTTTGTCTGTCTCATTTCTGCATTCGTCG...TCGTGACCAACTCAGTATACCACTGGAGGCTCTGTGAGCAAACAGCAAACTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413518.5 |
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| CDS-3UTR TCA 90 bp | TGGTATACTGAGTTGGTCACGACCCTCATTCCTTCGGCCTCCAACATCTCCCCTAGAGGAATGAAAAACTaGTACATGCTACAACATGGA | + |
|
Preference number: 4 (lower is better) Translates to: WYTELVTTLIPSASNISPRGMKN*YMLQHG Trigger: TCCATGTTGTAGCATGTATCAGTTTTTCATTCCTCT...AGGGGAGATGTTGGAGGCCGAAGGAATGAGGGTCGTGACCAACTCAGTATACCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000413518.5 |
||
| CDS-3UTR GCA 90 bp | AGACAGAGTTTGTCAGTTCGCCAACATCCTGCTTTCATGAGAACAGTTTGCTGTCAGTTTCACTTTCTCTaGTCTGGCAGACCTTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: RQSLSVRQHPAFMRTVCCQFHFL*SGRPSS Trigger: CGAGGAAGGTCTGCCAGAGCAGAGAAAGTGAAACTG...ACAGCAAACTGTTCTCATGAAAGCAGGATGTTGGCGAACTGACAAACTCTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000413518.5 ENST00000427361.5 |
||
| CDS-3UTR GCA 90 bp | AGACAGAGTTTGTCAGTTCGCCAACATCCTGCTTTCATGAGAACAGTTTGCTGTGAACAGTTTGCTGTTTaGTCACAGAGCCTCCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RQSLSVRQHPAFMRTVCCEQFAV*SQSLQW Trigger: CCACTGGAGGCTCTGTGAGCAAACAGCAAACTGTTC...ACAGCAAACTGTTCTCATGAAAGCAGGATGTTGGCGAACTGACAAACTCTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000413518.5 ENST00000427361.5 |
||
| CDS-3UTR CCA 90 bp | GGAAACAACCCCAATGTCTATGAACTAATGAGTAAACAAACTGTGGTATATCCACGGTCTCCCGTTCCATaGTCACACACACCTGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GNNPNVYELMSKQTVVYPRSPVP*SHTPGG Trigger: CCCTCCAGGTGTGTGTGACCATGGAACGGGAGACCG...TGGATATACCACAGTTTGTTTACTCATTAGTTCATAGACATTGGGGTTGTTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413518.5 |
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| CDS-3UTR CCA 90 bp | GATTTAACACAGGCCCACATGATTCCTTTCTTTGTTCAACAGGTTCTGGATGTTACCTGCACATACAGGTaGCATCAACACATGCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: DLTQAHMIPFFVQQVLDVTCTYR*HQHMQD Trigger: GTCCTGCATGTGTTGATGCCACCTGTATGTGCAGGT...AACATCCAGAACCTGTTGAACAAAGAAAGGAATCATGTGGGCCTGTGTTAAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413518.5 |
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| CDS-3UTR TCA 90 bp | GGCTCCTTGATATTAGGGAACAGGGACCTGAGCTTTTACAGCCCTTCATATTTAAACATCCTGCTTTCATaGGAACAGTTTGCTGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GSLILGNRDLSFYSPSYLNILLS*EQFAVC Trigger: GCAAACAGCAAACTGTTCTCATGAAAGCAGGATGTT...TAAATATGAAGGGCTGTAAAAGCTCAGGTCCCTGTTCCCTAATATCAAGGAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000413518.5 ENST00000427361.5 |
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| CDS-3UTR TCA 90 bp | GGGCTCCTTGATATTAGGGAACAGGGACCTGAGCTTTTACAGCCCTTCATATTTATGCTACAACATGGATaGACTCTGAAAACGTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GLLDIREQGPELLQPFIFMLQHG*TLKTFS Trigger: ACTGAACGTTTTCAGAGTTCATCCATGTTGTAGCAT...AAATATGAAGGGCTGTAAAAGCTCAGGTCCCTGTTCCCTAATATCAAGGAGCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000413518.5 |
||
| CDS-3UTR CCA 90 bp | TATTTATTAGGTAGAGTGAATAGGGAGGAAGGGATAACTGTCGGTCAGCTATTTGCATGGCCAAGAACATaGAGTCAGGGGTTTTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: YLLGRVNREEGITVGQLFAWPRT*SQGFLP Trigger: AGGCAAAAACCCCTGACTCCATGTTCTTGGCCATGC...AAATAGCTGACCGACAGTTATCCCTTCCTCCCTATTCACTCTACCTAATAAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000413518.5 ENST00000427361.5 |
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| CDS-3UTR CCA 90 bp | CATATAACGTGGATTAGTGGTTGCCAGAGGCTGGAGGAAGAGCGAATAGGCAGTATAATATCAGAGAGTTaGAAACAACCCCAATGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: HITWISGCQRLEEERIGSIISES*KQPQCL Trigger: TAGACATTGGGGTTGTTTCCAACTCTCTGATATTAT...ACTGCCTATTCGCTCTTCCTCCAGCCTCTGGCAACCACTAATCCACGTTATATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413518.5 |
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| CDS-3UTR GCA 90 bp | GGAAACAACCCCAATGTCTATGAACTAATGAGTAAACAAACTGTGGTATATCCAACGAAGGACGACGAATaGAGAAATGAGACAGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: GNNPNVYELMSKQTVVYPTKDDE*RNETDK Trigger: TTTGTCTGTCTCATTTCTGCATTCGTCGTCCTTCGT...TGGATATACCACAGTTTGTTTACTCATTAGTTCATAGACATTGGGGTTGTTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413518.5 |
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| 3UTR CAA 72 bp | TTCAGTGGTAAAAAGCCAGACACAAGAAACCACATATaGTATGACTCCATTTATATGAAGTGTCCAGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FSGKKPDTRNHI*YDSIYMKCPEE Trigger: CTCTTCTGGACACTTCATATAAATGGAGTCATACAATATGTGGTTTCTTGTGTCTGGCTTTTTACCACTGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000413518.5 |
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| CDS GCA 90 bp | CGTAAGCTGTCTTTCTCTCTGTCTCCTCTCCCTCTCTGCCTCGGCTaGCAGGCAGGGAAGGGCCCCCTGACCAGTGGACACATGACCCAC | + |
|
Preference number: 5 (lower is better) Translates to: RKLSFSLSPLPLCLG*QAGKGPLTSGHMTH Trigger: GTGGGTCATGTGTCCACTGGTCAGGGGGCCCTTCCCTGCCTGGCAGCCGAGGCAGAGAGGGAGAGGAGACAGAGAGAAAGACAGCTTACG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000590505.1 |
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| CDS CCA 90 bp | AGGCCCACGGTTGAATACCATGGATCCCTCCGGTCTCCCGTTCCATaGTCACACACACCTGGAGGGCACCCACACGGTTTGTCCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RPTVEYHGSLRSPVP*SHTPGGHPHGLSIS Trigger: GGAGATGGACAAACCGTGTGGGTGCCCTCCAGGTGTGTGTGACCATGGAACGGGAGACCGGAGGGATCCATGGTATTCAACCGTGGGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000413518.5 ENST00000590505.1 ENST00000608004.1 ENST00000608070.5 ENST00000609864.5 ENST00000610038.5 |
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| CDS CCA 90 bp | AGGCCCACGGTTGAATACCATGGATCCCTCCGGTCTCCCGTTCCATaGTCACACACACCTTATATTCTCCGCCGGCAGACTCTCCCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RPTVEYHGSLRSPVP*SHTPYILRRQTLPS Trigger: GGACGGGAGAGTCTGCCGGCGGAGAATATAAGGTGTGTGTGACCATGGAACGGGAGACCGGAGGGATCCATGGTATTCAACCGTGGGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427361.5 |
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| CDS TCA 90 bp | ACCCTGATTCAGAAACCTCCCGCTCCCGATACCTTCTCAGGGAACTaGCCTTATATTCTCCGCCGGCAGACTCTCCCGTCCAGGGGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: TLIQKPPAPDTFSGN*PYILRRQTLPSRGS Trigger: CGAACCCCTGGACGGGAGAGTCTGCCGGCGGAGAATATAAGGTCAGTTCCCTGAGAAGGTATCGGGAGCGGGAGGTTTCTGAATCAGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434052.5 |
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| CDS CCA 90 bp | AGTTTCACTTTCTCTGCTCTGGCAGACCTTCCTCGTTCAGGTCCCTaGTCGGGCACCACTTGTCACGGTTGCTTCACTGTGGCAGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SFTFSALADLPRSGP*SGTTCHGCFTVAAS Trigger: GGAGGCTGCCACAGTGAAGCAACCGTGACAAGTGGTGCCCGACCAGGGACCTGAACGAGGAAGGTCTGCCAGAGCAGAGAAAGTGAAACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000413518.5 ENST00000427361.5 ENST00000434052.5 ENST00000608070.5 ENST00000609864.5 ENST00000610038.5 |
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| CDS-3UTR CAA 90 bp | ACCTGGGACATGACTGCCCCCAGCATTCCTTCTGGCGGCAGACAGAGTTTGTCACACCACTTGTCACGGTaGCTTCACTGTGGCAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: TWDMTAPSIPSGGRQSLSHHLSR*LHCGSL Trigger: GAGGCTGCCACAGTGAAGCAACCGTGACAAGTGGTG...TGACAAACTCTGTCTGCCGCCAGAAGGAATGCTGGGGGCAGTCATGTCCCAGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000413518.5 ENST00000427361.5 |
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| CDS-3UTR CAA 90 bp | ACCTGGGACATGACTGCCCCCAGCATTCCTTCTGGCGGCAGACAGAGTTTGTCAGGGTCAGGGGGCTCCTaGATATTAGGGAACAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: TWDMTAPSIPSGGRQSLSGSGGS*ILGNRD Trigger: GTCCCTGTTCCCTAATATCAAGGAGCCCCCTGACCC...TGACAAACTCTGTCTGCCGCCAGAAGGAATGCTGGGGGCAGTCATGTCCCAGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000413518.5 ENST00000427361.5 |
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| CDS GCA 90 bp | AGGGCACCCACACGGTTTGTCCATCTCCTCTTTTCCTCTAGCAGTTaGCAGTGTCGTTCTGCTGGGGTCTTATATTCTCCGCCGGCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: RAPTRFVHLLFSSSS*QCRSAGVLYSPPAD Trigger: GTCTGCCGGCGGAGAATATAAGACCCCAGCAGAACGACACTGGCAACTGCTAGAGGAAAAGAGGAGATGGACAAACCGTGTGGGTGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000609864.5 |
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| CDS-3UTR CAA 90 bp | GACTGCCCCCAGCATTCCTTCTGGCGGCAGACAGAGTTTGTCAGTTCGCCAACAGACAAAAGGATCTGTTaGAAAGAAGGGGTCAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: DCPQHSFWRQTEFVSSPTDKRIC*KEGVRG Trigger: CCCCCTGACCCCTTCTTTCAAACAGATCCTTTTGTC...TGTTGGCGAACTGACAAACTCTGTCTGCCGCCAGAAGGAATGCTGGGGGCAGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000413518.5 |
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| CDS CCA 90 bp | ATATGTAACATCCATCTGCCAGATTTCATTTGGAGCCAAGCCTCGTaGGTTGCATCCTTCCACAGGTGCAACACCAGGGACATGCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: ICNIHLPDFIWSQAS*VASFHRCNTRDMLA Trigger: TGCCAGCATGTCCCTGGTGTTGCACCTGTGGAAGGATGCAACCCACGAGGCTTGGCTCCAAATGAAATCTGGCAGATGGATGTTACATAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590505.1 |
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| CDS-3UTR CAA 90 bp | AACAGTTTGCTGTTTGCTCACAGAGCCTCCAGTGGTATACTGAGTTGGTCACGAGCCCTTGTTCTGTCTTaGCATTCAGATTCCGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: NSLLFAHRASSGILSWSRALVLS*HSDSAG Trigger: GCCAGCGGAATCTGAATGCAAAGACAGAACAAGGGC...TCGTGACCAACTCAGTATACCACTGGAGGCTCTGTGAGCAAACAGCAAACTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000413518.5 ENST00000427361.5 |
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| CDS-3UTR CAA 90 bp | GTTCGCCAACATCCTGCTTTCATGAGAACAGTTTGCTGTTTGCTCACAGAGCCTGCCCTTGTTCTGTCTTaGCATTCAGATTCCGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: VRQHPAFMRTVCCLLTEPALVLS*HSDSAG Trigger: GCCAGCGGAATCTGAATGCAAAGACAGAACAAGGGC...AGGCTCTGTGAGCAAACAGCAAACTGTTCTCATGAAAGCAGGATGTTGGCGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000413518.5 ENST00000427361.5 |
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| CDS-3UTR CAA 90 bp | GATTTAACACAGGCCCACATGATTCCTTTCTTTGTTCAACAGGTTCTGGATGTTCACCACTTGTCACGGTaGCTTCACTGTGGCAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: DLTQAHMIPFFVQQVLDVHHLSR*LHCGSL Trigger: GAGGCTGCCACAGTGAAGCAACCGTGACAAGTGGTG...AACATCCAGAACCTGTTGAACAAAGAAAGGAATCATGTGGGCCTGTGTTAAATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000413518.5 ENST00000427361.5 |
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| CDS CCA 90 bp | GTGATTTGCCATGCAGTGGACATCTCCCAGGCCGCAGCCTGTTGTTaGGAATCCAAGGTAACAATAATTTTATCAGGATCATATCCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: VICHAVDISQAAACC*ESKVTIILSGSYPV Trigger: TACAGGATATGATCCTGATAAAATTATTGTTACCTTGGATTCCCAACAACAGGCTGCGGCCTGGGAGATGTCCACTGCATGGCAAATCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590505.1 |
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| CDS GCA 90 bp | ATGGTTATCTATTATTTCTACAAAATCTGCGAAAGTGATTTGCCATaGAGTGGACATCTCCCAGGCCGCAGCCTGTTGTTGGGAATCCAA | + |
|
Preference number: 5 (lower is better) Translates to: MVIYYFYKICESDLP*SGHLPGRSLLLGIQ Trigger: TTGGATTCCCAACAACAGGCTGCGGCCTGGGAGATGTCCACTGCATGGCAAATCACTTTCGCAGATTTTGTAGAAATAATAGATAACCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590505.1 |
||
| CDS TCA 90 bp | CTGATGGATAATGGTTATCTATTATTTCTACAAAATCTGCGAAAGTaGTTTGCCATGCAGTGGACATCTCCCAGGCCGCAGCCTGTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LMDNGYLLFLQNLRK*FAMQWTSPRPQPVV Trigger: AACAACAGGCTGCGGCCTGGGAGATGTCCACTGCATGGCAAATCACTTTCGCAGATTTTGTAGAAATAATAGATAACCATTATCCATCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590505.1 |
||
| CDS-3UTR CAA 90 bp | GTTCGCCAACATCCTGCTTTCATGAGAACAGTTTGCTGTTTGCTCACAGAGCCTTATAATATCAGAGAGTaGGAAACAACCCCAATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: VRQHPAFMRTVCCLLTEPYNIRE*ETTPMS Trigger: AGACATTGGGGTTGTTTCCAACTCTCTGATATTATA...AGGCTCTGTGAGCAAACAGCAAACTGTTCTCATGAAAGCAGGATGTTGGCGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413518.5 |
||
| CDS CCA 90 bp | AAGATTCTTTCAATTTTTGAGATTCAGAACATAGCACCTGCTGTCTaGCAGAATAAGAAGAGGACAATGGCAGGAGGACAGTACAGACCA | + |
|
Preference number: 5 (lower is better) Translates to: KILSIFEIQNIAPAV*QNKKRTMAGGQYRP Trigger: TGGTCTGTACTGTCCTCCTGCCATTGTCCTCTTCTTATTCTGCCAGACAGCAGGTGCTATGTTCTGAATCTCAAAAATTGAAAGAATCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000434052.5 |
||
| CDS CCA 90 bp | GACAGTATCGTCAGACATGACCAGCTGTTTCCCCAGTTTGGCATGTaGCATGTAACATATGGGAGTAAGTGTCTATATTACATGAACATA | + |
|
Preference number: 5 (lower is better) Translates to: DSIVRHDQLFPQFGM*HVTYGSKCLYYMNI Trigger: TATGTTCATGTAATATAGACACTTACTCCCATATGTTACATGCCACATGCCAAACTGGGGAAACAGCTGGTCATGTCTGACGATACTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590505.1 |
||
| CDS GCA 72 bp | CCCGATAGTCCGCGCGCCCGTGAGCGTCTTACACACTaGCGCCGGCACTTCCGGTACGCACTTCCGCCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: PDSPRARERLTH*RRHFRYALPPG Trigger: ACCAGGCGGAAGTGCGTACCGGAAGTGCCGGCGGCAGTGTGTAAGACGCTCACGGGCGCGCGGACTATCGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413518.5 |
||
| CDS GCA 72 bp | TCTTTCTCTCTGTCTCCTCTCCCTCTCTGCCTCGGCTaGCAGGCAGGGAAGGGCCCCCTGACCAGTGGACAC | + |
|
Preference number: 6 (lower is better) Translates to: SFSLSPLPLCLG*QAGKGPLTSGH Trigger: GTGTCCACTGGTCAGGGGGCCCTTCCCTGCCTGGCAGCCGAGGCAGAGAGGGAGAGGAGACAGAGAGAAAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000590505.1 |
||
| CDS CAA 72 bp | AGCCAGACATTCGGGGCCACTACCGGTCTCCGCGCATaGGTGGTAGTGGTCCCCCAGGCCCAGCTGCCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: SQTFGATTGLRA*VVVVPQAQLPF Trigger: AAAAGGCAGCTGGGCCTGGGGGACCACTACCACCAATGCGCGGAGACCGGTAGTGGCCCCGAATGTCTGGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000590505.1 |
||
| CDS GCA 72 bp | TGGAGCCAAGCCTCGTGGGTTGCATCCTTCCACAGGTaGAACACCAGGGACATGCTGGCAAGTGGGGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: WSQASWVASFHR*NTRDMLASGAG Trigger: GCCTGCCCCACTTGCCAGCATGTCCCTGGTGTTGCACCTGTGGAAGGATGCAACCCACGAGGCTTGGCTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590505.1 |
||
| CDS CCA 72 bp | CCTCGGCTGCCAGGCAGGGAAGGGCCCCCTGACCAGTaGACACATGACCCACGTGACCTTACCTATCATTGG | + |
|
Preference number: 6 (lower is better) Translates to: PRLPGREGPPDQ*THDPRDLTYHW Trigger: CCAATGATAGGTAAGGTCACGTGGGTCATGTGTCCACTGGTCAGGGGGCCCTTCCCTGCCTGGCAGCCGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000590505.1 |
||
| CDS CAA 90 bp | AGACCTTCCTCGTTCAGGTCCCTGGTCGGGCACCACTTGTCACGGTaGCTTCACTGTGGCAGCCTCCTCAGAGAGCCTAGCCGCCCGATA | + |
|
Preference number: 6 (lower is better) Translates to: RPSSFRSLVGHHLSR*LHCGSLLREPSRPI Trigger: TATCGGGCGGCTAGGCTCTCTGAGGAGGCTGCCACAGTGAAGCAACCGTGACAAGTGGTGCCCGACCAGGGACCTGAACGAGGAAGGTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000413518.5 ENST00000427361.5 ENST00000434052.5 ENST00000608070.5 ENST00000609864.5 ENST00000610038.5 |
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| CDS CAA 90 bp | TGCTCTGGCAGACCTTCCTCGTTCAGGTCCCTGGTCGGGCACCACTaGTCACGGTTGCTTCACTGTGGCAGCCTCCTCAGAGAGCCTAGC | + |
|
Preference number: 6 (lower is better) Translates to: CSGRPSSFRSLVGHH*SRLLHCGSLLREPS Trigger: GCTAGGCTCTCTGAGGAGGCTGCCACAGTGAAGCAACCGTGACAAGTGGTGCCCGACCAGGGACCTGAACGAGGAAGGTCTGCCAGAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000413518.5 ENST00000427361.5 ENST00000434052.5 ENST00000608070.5 ENST00000609864.5 ENST00000610038.5 |
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| CDS CCA 72 bp | TCTGTTATGCCCAGACAGGGCCACCAGAGGGCTCCTTaGTCTAGTGGTGACGCCAGCGTTTGGGAAGACCGT | + |
|
Preference number: 6 (lower is better) Translates to: SVMPRQGHQRAP*SSGDASVWEDR Trigger: ACGGTCTTCCCAAACGCTGGCGTCACCACTAGACCAAGGAGCCCTCTGGTGGCCCTGTCTGGGCATAACAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590505.1 |
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| CDS CAA 72 bp | AGACCTTCCTCGTTCAGGTCCCTGGTCGGGCACCACTaGTCACGGTTGCTTCACTGTGGCAGCCTCCTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: RPSSFRSLVGHH*SRLLHCGSLLR Trigger: TCTGAGGAGGCTGCCACAGTGAAGCAACCGTGACAAGTGGTGCCCGACCAGGGACCTGAACGAGGAAGGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000413518.5 ENST00000427361.5 ENST00000434052.5 ENST00000608070.5 ENST00000609864.5 ENST00000610038.5 |
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| CDS TCA 72 bp | CAGAAACCTCCCGCTCCCGATACCTTCTCAGGGAACTaGCCTTATATTCTCCGCCGGCAGACTCTCCCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: QKPPAPDTFSGN*PYILRRQTLPS Trigger: GGACGGGAGAGTCTGCCGGCGGAGAATATAAGGTCAGTTCCCTGAGAAGGTATCGGGAGCGGGAGGTTTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434052.5 |
||
| CDS CCA 72 bp | TTCTCTGCTCTGGCAGACCTTCCTCGTTCAGGTCCCTaGTCGGGCACCACTTGTCACGGTTGCTTCACTGTG | + |
|
Preference number: 6 (lower is better) Translates to: FSALADLPRSGP*SGTTCHGCFTV Trigger: CACAGTGAAGCAACCGTGACAAGTGGTGCCCGACCAGGGACCTGAACGAGGAAGGTCTGCCAGAGCAGAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000413518.5 ENST00000427361.5 ENST00000434052.5 ENST00000608070.5 ENST00000609864.5 ENST00000610038.5 |
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| CDS CCA 72 bp | GTTGAATACCATGGATCCCTCCGGTCTCCCGTTCCATaGTCACACACACCTGGAGGGCACCCACACGGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: VEYHGSLRSPVP*SHTPGGHPHGL Trigger: CAAACCGTGTGGGTGCCCTCCAGGTGTGTGTGACCATGGAACGGGAGACCGGAGGGATCCATGGTATTCAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000413518.5 ENST00000590505.1 ENST00000608004.1 ENST00000608070.5 ENST00000609864.5 ENST00000610038.5 |
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| CDS CCA 72 bp | ATCCCTCCGGTCTCCCGTTCCATGGTCACACACACCTaGAGGGCACCCACACGGTTTGTCCATCTCCTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: IPPVSRSMVTHT*RAPTRFVHLLF Trigger: AAAGAGGAGATGGACAAACCGTGTGGGTGCCCTCCAGGTGTGTGTGACCATGGAACGGGAGACCGGAGGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000608004.1 ENST00000609864.5 |
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| CDS CAA 72 bp | TGCAACACCAGGGACATGCTGGCAAGTGGGGCAGGCTaGCACAATAACTCAAGCCTGGCTGCGAGGCAGATG | + |
|
Preference number: 6 (lower is better) Translates to: CNTRDMLASGAG*HNNSSLAARQM Trigger: CATCTGCCTCGCAGCCAGGCTTGAGTTATTGTGCAAGCCTGCCCCACTTGCCAGCATGTCCCTGGTGTTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590505.1 |
||
| CDS CCA 72 bp | ATCCCTCCGGTCTCCCGTTCCATGGTCACACACACCTaGAGGGCACCCACACGGTTTGTCCATCTCCTTATA | + |
|
Preference number: 6 (lower is better) Translates to: IPPVSRSMVTHT*RAPTRFVHLLI Trigger: TATAAGGAGATGGACAAACCGTGTGGGTGCCCTCCAGGTGTGTGTGACCATGGAACGGGAGACCGGAGGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413518.5 |
||
| CDS CCA 72 bp | GTCGGCCCTTGTTCTGTCTTTGCATTCAGATTCCGCTaGCTCATGGCTCGTACTGGAGGTAACAGGCCCACG | + |
|
Preference number: 6 (lower is better) Translates to: VGPCSVFAFRFR*LMARTGGNRPT Trigger: CGTGGGCCTGTTACCTCCAGTACGAGCCATGAGCCAGCGGAATCTGAATGCAAAGACAGAACAAGGGCCGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000413518.5 ENST00000427361.5 ENST00000590505.1 ENST00000608070.5 ENST00000609864.5 ENST00000610038.5 |
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| CDS GCA 72 bp | GTTATCCGGAGGCCTAACCGTCTCCCTGTGATTCTGTaGTTCAGTGGTCACGCTCCTAGTCCGCCTTCATGT | + |
|
Preference number: 6 (lower is better) Translates to: VIRRPNRLPVIL*FSGHAPSPPSC Trigger: ACATGAAGGCGGACTAGGAGCGTGACCACTGAAGCACAGAATCACAGGGAGACGGTTAGGCCTCCGGATAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590505.1 |
||
| CDS CCA 72 bp | TTGCATCCTTCCACAGGTGCAACACCAGGGACATGCTaGCAAGTGGGGCAGGCTTGCACAATAACTCAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LHPSTGATPGTC*QVGQACTITQA Trigger: GGCTTGAGTTATTGTGCAAGCCTGCCCCACTTGCCAGCATGTCCCTGGTGTTGCACCTGTGGAAGGATGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590505.1 |
||
| CDS CAA 72 bp | CCATGGTCACACACACCTGGAGGGCACCCACACGGTTaGTCCATCTCCTCTTTTCCTCTAGCAGTTGCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: PWSHTPGGHPHG*SISSFPLAVAS Trigger: ACTGGCAACTGCTAGAGGAAAAGAGGAGATGGACAAACCGTGTGGGTGCCCTCCAGGTGTGTGTGACCATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000608004.1 ENST00000609864.5 |
||
| CDS GCA 72 bp | GGGGTTCGTAGTTCGTCTGATCAGTTTCACTTTCTCTaGTCTGGCAGACCTTCCTCGTTCAGGTCCCTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: GVRSSSDQFHFL*SGRPSSFRSLV Trigger: GACCAGGGACCTGAACGAGGAAGGTCTGCCAGAGCAGAGAAAGTGAAACTGATCAGACGAACTACGAACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000413518.5 ENST00000427361.5 ENST00000434052.5 ENST00000608004.1 ENST00000608070.5 ENST00000609864.5 ENST00000610038.5 |
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| CDS GCA 72 bp | TGTCATTGTGACTCCGGTCGGCCCTTGTTCTGTCTTTaGATTCAGATTCCGCTGGCTCATGGCTCGTACTGG | + |
|
Preference number: 6 (lower is better) Translates to: CHCDSGRPLFCL*IQIPLAHGSYW Trigger: CCAGTACGAGCCATGAGCCAGCGGAATCTGAATGCAAAGACAGAACAAGGGCCGACCGGAGTCACAATGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000413518.5 ENST00000427361.5 ENST00000590505.1 ENST00000608070.5 ENST00000609864.5 ENST00000610038.5 |
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| CDS GCA 72 bp | TCTGCCAGATTTCATTTGGAGCCAAGCCTCGTGGGTTaGATCCTTCCACAGGTGCAACACCAGGGACATGCT | + |
|
Preference number: 6 (lower is better) Translates to: SARFHLEPSLVG*ILPQVQHQGHA Trigger: AGCATGTCCCTGGTGTTGCACCTGTGGAAGGATGCAACCCACGAGGCTTGGCTCCAAATGAAATCTGGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590505.1 |
||
| CDS CCA 72 bp | GTTGAATACCATGGATCCCTCCGGTCTCCCGTTCCATaGTCACACACACCTTATATTCTCCGCCGGCAGACT | + |
|
Preference number: 6 (lower is better) Translates to: VEYHGSLRSPVP*SHTPYILRRQT Trigger: AGTCTGCCGGCGGAGAATATAAGGTGTGTGTGACCATGGAACGGGAGACCGGAGGGATCCATGGTATTCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427361.5 |
||
| CDS CCA 72 bp | ATCCATCTGCCAGATTTCATTTGGAGCCAAGCCTCGTaGGTTGCATCCTTCCACAGGTGCAACACCAGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: IHLPDFIWSQAS*VASFHRCNTRD Trigger: GTCCCTGGTGTTGCACCTGTGGAAGGATGCAACCCACGAGGCTTGGCTCCAAATGAAATCTGGCAGATGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590505.1 |
||
| CDS CAA 72 bp | ATCTGCCAGATTTCATTTGGAGCCAAGCCTCGTGGGTaGCATCCTTCCACAGGTGCAACACCAGGGACATGC | + |
|
Preference number: 6 (lower is better) Translates to: ICQISFGAKPRG*HPSTGATPGTC Trigger: GCATGTCCCTGGTGTTGCACCTGTGGAAGGATGCAACCCACGAGGCTTGGCTCCAAATGAAATCTGGCAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590505.1 |
||
| CDS CAA 90 bp | GTAACATCCATCTGCCAGATTTCATTTGGAGCCAAGCCTCGTGGGTaGCATCCTTCCACAGGTGCAACACCAGGGACATGCTGGCAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: VTSICQISFGAKPRG*HPSTGATPGTCWQV Trigger: CACTTGCCAGCATGTCCCTGGTGTTGCACCTGTGGAAGGATGCAACCCACGAGGCTTGGCTCCAAATGAAATCTGGCAGATGGATGTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590505.1 |
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| CDS CAA 72 bp | GGTCCCCCAGGCCCAGCTGCCTTTTATCTCTTTGTCTaGTGTCTTTATTTCTACACTCTCTCGTCGCCGCAC | + |
|
Preference number: 6 (lower is better) Translates to: GPPGPAAFYLFV*CLYFYTLSSPH Trigger: GTGCGGCGACGAGAGAGTGTAGAAATAAAGACACAAGACAAAGAGATAAAAGGCAGCTGGGCCTGGGGGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000590505.1 |
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| CDS CAA 90 bp | TGGAGTCTCAGAAATAGGTTAAGCAGTTCTGGTTTTAAGGTGCTCTaGTGTGGGCGGCAAGCCATCCAGGCGCCGAAGCAAGAGACAGAG | + |
|
Preference number: 6 (lower is better) Translates to: WSLRNRLSSSGFKVL*CGRQAIQAPKQETE Trigger: CTCTGTCTCTTGCTTCGGCGCCTGGATGGCTTGCCGCCCACACAAGAGCACCTTAAAACCAGAACTGCTTAACCTATTTCTGAGACTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000590505.1 ENST00000608004.1 |
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| CDS CCA 72 bp | CTTGTTCTGTCTTTGCATTCAGATTCCGCTGGCTCATaGCTCGTACTGGAGGTAACAGGCCCACGGTTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: LVLSLHSDSAGS*LVLEVTGPRLN Trigger: ATTCAACCGTGGGCCTGTTACCTCCAGTACGAGCCATGAGCCAGCGGAATCTGAATGCAAAGACAGAACAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000413518.5 ENST00000427361.5 ENST00000590505.1 ENST00000608004.1 ENST00000608070.5 ENST00000609864.5 ENST00000610038.5 |
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| CDS CAA 72 bp | TATGGGGTTGGATGTCATTGTGACTCCGGTCGGCCCTaGTTCTGTCTTTGCATTCAGATTCCGCTGGCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: YGVGCHCDSGRP*FCLCIQIPLAH Trigger: ATGAGCCAGCGGAATCTGAATGCAAAGACAGAACAAGGGCCGACCGGAGTCACAATGACATCCAACCCCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000413518.5 ENST00000427361.5 ENST00000590505.1 ENST00000608070.5 ENST00000609864.5 ENST00000610038.5 |
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| CDS TCA 72 bp | AGCCTAGGAAAAACCAGGCCATACAGAGATAGGAGCTaGGGGGACATAGTGAGGTGTGACCAGAAGACAAGA | + |
|
Preference number: 6 (lower is better) Translates to: SLGKTRPYRDRS*GDIVRCDQKTR Trigger: TCTTGTCTTCTGGTCACACCTCACTATGTCCCCTCAGCTCCTATCTCTGTATGGCCTGGTTTTTCCTAGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000590505.1 |
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| CDS CAA 72 bp | AGACCCACCGACCCTGTGGGGCTGGTCCGTACACTCTaGATAGTGGCAGTTTTAATGCAACTAGCTACATTT | + |
|
Preference number: 6 (lower is better) Translates to: RPTDPVGLVRTL*IVAVLMQLATF Trigger: AAATGTAGCTAGTTGCATTAAAACTGCCACTATCAAGAGTGTACGGACCAGCCCCACAGGGTCGGTGGGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000590505.1 |
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| CDS CCA 72 bp | GCTCCTAGTCCGCCTTCATGTTCCATCCTGTACACCTaGCTCTGCCTTCTAGATAGCAGTAGTAAATTAGTG | + |
|
Preference number: 6 (lower is better) Translates to: APSPPSCSILYT*LCLLDSSSKLV Trigger: CACTAATTTACTACTGCTATCTAGAAGGCAGAGCCAGGTGTACAGGATGGAACATGAAGGCGGACTAGGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590505.1 |
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| CDS CAA 72 bp | CCATGCAGTGGACATCTCCCAGGCCGCAGCCTGTTGTaGGGAATCCAAGGTAACAATAATTTTATCAGGATC | + |
|
Preference number: 6 (lower is better) Translates to: PCSGHLPGRSLL*GIQGNNNFIRI Trigger: GATCCTGATAAAATTATTGTTACCTTGGATTCCCAACAACAGGCTGCGGCCTGGGAGATGTCCACTGCATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590505.1 |
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| CDS CAA 72 bp | TTGCCATGCAGTGGACATCTCCCAGGCCGCAGCCTGTaGTTGGGAATCCAAGGTAACAATAATTTTATCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LPCSGHLPGRSL*LGIQGNNNFIR Trigger: CCTGATAAAATTATTGTTACCTTGGATTCCCAACAACAGGCTGCGGCCTGGGAGATGTCCACTGCATGGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590505.1 |
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| CDS CAA 72 bp | TCCTCTAGCAGTTGCCAGTGTCGTTCTGCTGGGGTCTaGCCATCCGTACCAGGAGTCAAACAATTTAAAGTA | + |
|
Preference number: 6 (lower is better) Translates to: SSSSCQCRSAGV*PSVPGVKQFKV Trigger: TACTTTAAATTGTTTGACTCCTGGTACGGATGGCAAGACCCCAGCAGAACGACACTGGCAACTGCTAGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590505.1 |
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| CDS CAA 90 bp | TGCCTCTTTTCCTCTAGCAGTTGCCAGTGTCGTTCTGCTGGGGTCTaGCCATCCGTACCAGGAGTCAAACAATTTAAAGTAAACAAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: CLFSSSSCQCRSAGV*PSVPGVKQFKVNKA Trigger: AGCCTTGTTTACTTTAAATTGTTTGACTCCTGGTACGGATGGCAAGACCCCAGCAGAACGACACTGGCAACTGCTAGAGGAAAAGAGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000590505.1 |
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| CDS CAA 90 bp | AGTGATTTGCCATGCAGTGGACATCTCCCAGGCCGCAGCCTGTTGTaGGGAATCCAAGGTAACAATAATTTTATCAGGATCATATCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: SDLPCSGHLPGRSLL*GIQGNNNFIRIISC Trigger: ACAGGATATGATCCTGATAAAATTATTGTTACCTTGGATTCCCAACAACAGGCTGCGGCCTGGGAGATGTCCACTGCATGGCAAATCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590505.1 |
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| CDS CAA 90 bp | GAAAGTGATTTGCCATGCAGTGGACATCTCCCAGGCCGCAGCCTGTaGTTGGGAATCCAAGGTAACAATAATTTTATCAGGATCATATCC | + |
|
Preference number: 6 (lower is better) Translates to: ESDLPCSGHLPGRSL*LGIQGNNNFIRIIS Trigger: GGATATGATCCTGATAAAATTATTGTTACCTTGGATTCCCAACAACAGGCTGCGGCCTGGGAGATGTCCACTGCATGGCAAATCACTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590505.1 |
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| CDS CAA 90 bp | CCGGACCTTTCCATTGTCCTTCTTCTGGGGATTTCCATAACACTTTaGGATAAACTTGCCTCTTTTCCTCTAGCAGTTGCCAGTGTCGTT | + |
|
Preference number: 6 (lower is better) Translates to: PDLSIVLLLGISITL*DKLASFPLAVASVV Trigger: AACGACACTGGCAACTGCTAGAGGAAAAGAGGCAAGTTTATCCAAAAGTGTTATGGAAATCCCCAGAAGAAGGACAATGGAAAGGTCCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000590505.1 ENST00000608070.5 ENST00000610038.5 |
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| CDS TCA 72 bp | GACTTTTGTGGTTGTAGCCAGGAGGCATGTCGTTGCTaGAGCATCTTTCTACAAGCTGTAATTCAGCTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: DFCGCSQEACRC*SIFLQAVIQLL Trigger: CAGAAGCTGAATTACAGCTTGTAGAAAGATGCTTCAGCAACGACATGCCTCCTGGCTACAACCACAAAAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590505.1 |
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| CDS GCA 72 bp | TATTATTTCTACAAAATCTGCGAAAGTGATTTGCCATaGAGTGGACATCTCCCAGGCCGCAGCCTGTTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: YYFYKICESDLP*SGHLPGRSLLL Trigger: CAACAACAGGCTGCGGCCTGGGAGATGTCCACTGCATGGCAAATCACTTTCGCAGATTTTGTAGAAATAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590505.1 |
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| CDS CCA 72 bp | CTATATATATGTAACATCCATCTGCCAGATTTCATTTaGAGCCAAGCCTCGTGGGTTGCATCCTTCCACAGG | + |
|
Preference number: 6 (lower is better) Translates to: LYICNIHLPDFI*SQASWVASFHR Trigger: CCTGTGGAAGGATGCAACCCACGAGGCTTGGCTCCAAATGAAATCTGGCAGATGGATGTTACATATATATAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590505.1 |
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| CDS CAA 72 bp | TTGAATAAAGGTAATTTCAGGCTGTGCAGCTTTCAATaGCCGGTTGGTGGTTCACCCGATCCTATAGACGCA | + |
|
Preference number: 6 (lower is better) Translates to: LNKGNFRLCSFQ*PVGGSPDPIDA Trigger: TGCGTCTATAGGATCGGGTGAACCACCAACCGGCAATTGAAAGCTGCACAGCCTGAAATTACCTTTATTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000413518.5 ENST00000427361.5 ENST00000590505.1 |
||
| CDS CAA 72 bp | GTTATCTATTATTTCTACAAAATCTGCGAAAGTGATTaGCCATGCAGTGGACATCTCCCAGGCCGCAGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: VIYYFYKICESD*PCSGHLPGRSL Trigger: CAGGCTGCGGCCTGGGAGATGTCCACTGCATGGCAAATCACTTTCGCAGATTTTGTAGAAATAATAGATAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590505.1 |
||
| CDS CAA 72 bp | GAGATGACTCACACTCTTTACCCTGCCCCTTTTGCTTaGTATCCAATAAATAAGAGCGCAGCCAGACATTCG | + |
|
Preference number: 6 (lower is better) Translates to: EMTHTLYPAPFA*YPINKSAARHS Trigger: CGAATGTCTGGCTGCGCTCTTATTTATTGGATACAAAGCAAAAGGGGCAGGGTAAAGAGTGTGAGTCATCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000590505.1 |
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| CDS CAA 90 bp | TGGATAATGGTTATCTATTATTTCTACAAAATCTGCGAAAGTGATTaGCCATGCAGTGGACATCTCCCAGGCCGCAGCCTGTTGTTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: WIMVIYYFYKICESD*PCSGHLPGRSLLLG Trigger: TCCCAACAACAGGCTGCGGCCTGGGAGATGTCCACTGCATGGCAAATCACTTTCGCAGATTTTGTAGAAATAATAGATAACCATTATCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590505.1 |
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| CDS TCA 72 bp | GGCGCTGCTGGTGAGACAAAAGATTCTTTCAATTTTTaGGATTCAGAACATAGCACCTGCTGTCTGGCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: GAAGETKDSFNF*DSEHSTCCLAE Trigger: TTCTGCCAGACAGCAGGTGCTATGTTCTGAATCTCAAAAATTGAAAGAATCTTTTGTCTCACCAGCAGCGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000434052.5 |
||
| CDS GCA 72 bp | TTATCTATTATTTCTACAAAATCTGCGAAAGTGATTTaGCATGCAGTGGACATCTCCCAGGCCGCAGCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LSIISTKSAKVI*HAVDISQAAAC Trigger: ACAGGCTGCGGCCTGGGAGATGTCCACTGCATGGCAAATCACTTTCGCAGATTTTGTAGAAATAATAGATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590505.1 |
||
| CDS CCA 72 bp | TCAATTTTTGAGATTCAGAACATAGCACCTGCTGTCTaGCAGAATAAGAAGAGGACAATGGCAGGAGGACAG | + |
|
Preference number: 6 (lower is better) Translates to: SIFEIQNIAPAV*QNKKRTMAGGQ Trigger: CTGTCCTCCTGCCATTGTCCTCTTCTTATTCTGCCAGACAGCAGGTGCTATGTTCTGAATCTCAAAAATTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000434052.5 |
||
| CDS CCA 72 bp | GTCAGACATGACCAGCTGTTTCCCCAGTTTGGCATGTaGCATGTAACATATGGGAGTAAGTGTCTATATTAC | + |
|
Preference number: 6 (lower is better) Translates to: VRHDQLFPQFGM*HVTYGSKCLYY Trigger: GTAATATAGACACTTACTCCCATATGTTACATGCCACATGCCAAACTGGGGAAACAGCTGGTCATGTCTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590505.1 |
||
| CDS CCA 72 bp | TACCCGCTCAATAATGCCTGGCCCTCAGGGATTGTATaGAATTCCTGTTTTATGATTGATTGCCCACAATTG | + |
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Preference number: 6 (lower is better) Translates to: YPLNNAWPSGIV*NSCFMIDCPQL Trigger: CAATTGTGGGCAATCAATCATAAAACAGGAATTCCATACAATCCCTGAGGGCCAGGCATTATTGAGCGGGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590505.1 |
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| CDS CAA 72 bp | GCTCTATCATTACCTAGAGATAGTGGCCCCAGGAAGTaGTGTGTGAGATCGGATATGAGAAATATGAAAAGG | + |
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Preference number: 6 (lower is better) Translates to: ALSLPRDSGPRK*CVRSDMRNMKR Trigger: CCTTTTCATATTTCTCATATCCGATCTCACACACAACTTCCTGGGGCCACTATCTCTAGGTAATGATAGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000590505.1 |
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| CDS CAA 72 bp | TCCATTGTCCTTCTTCTGGGGATTTCCATAACACTTTaGGATAAACTTGCCTCTTTTCCTCTAGCAGTTGCC | + |
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Preference number: 6 (lower is better) Translates to: SIVLLLGISITL*DKLASFPLAVA Trigger: GGCAACTGCTAGAGGAAAAGAGGCAAGTTTATCCAAAAGTGTTATGGAAATCCCCAGAAGAAGGACAATGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000590505.1 ENST00000608070.5 ENST00000610038.5 |
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| CDS TCA 72 bp | ATGAAGAATCTCCTTGGAGGGTTTGATAAACATGAGTaGGTTGATAAGAAGCAATACCTAGCATTGGGCGCA | + |
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Preference number: 6 (lower is better) Translates to: MKNLLGGFDKHE*VDKKQYLALGA Trigger: TGCGCCCAATGCTAGGTATTGCTTCTTATCAACTCACTCATGTTTATCAAACCCTCCAAGGAGATTCTTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590505.1 |
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| CDS TCA 72 bp | GTTATGTGTAATAACCTCCTGCAGAAGCTTAATGTTTaGGAACTAACCCGAGCACCAGATTGTTTAAGTAAA | + |
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Preference number: 6 (lower is better) Translates to: VMCNNLLQKLNV*ELTRAPDCLSK Trigger: TTTACTTAAACAATCTGGTGCTCGGGTTAGTTCTCAAACATTAAGCTTCTGCAGGAGGTTATTACACATAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434052.5 |
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| CDS GCA 72 bp | CTATATTACATGAACATAGCGGAGTTAGCCAAAGGCTaGTATATATATGTAACATCCATCTGCCAGATTTCA | + |
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Preference number: 6 (lower is better) Translates to: LYYMNIAELAKG*YIYVTSICQIS Trigger: TGAAATCTGGCAGATGGATGTTACATATATATAGCAGCCTTTGGCTAACTCCGCTATGTTCATGTAATATAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590505.1 |
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| CDS GCA 72 bp | TTATCAGGATCATATCCTGTAAGCATTTTTGATCTATaGCTGCCTATTGTTATAAGTTGTGTGACTAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: LSGSYPVSIFDL*LPIVISCVTKA Trigger: TGCTTTAGTCACACAACTTATAACAATAGGCAGGCATAGATCAAAAATGCTTACAGGATATGATCCTGATAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000590505.1 |
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