Pregenerated sensors for ERVH48-1 (Homo sapiens)
Ensembl gene IDs: ENSG00000233056Ensembl transcript IDs: ENST00000447535.1
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATCTTCAGGGGGTACGTGTCTTCCAGCCAGCTCTCTTCCTGCCTCTaGTATCTTGCTGCTGGTGCAAGTTTGTACCTTGGGACTGGGCCT | + |
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Preference number: 1 (lower is better) Translates to: IFRGYVSSSQLSSCL*YLAAGASLYLGTGP Trigger: AGGCCCAGTCCCAAGGTACAAACTTGCACCAGCAGCAAGATAGCAGAGGCAGGAAGAGAGCTGGCTGGAAGACACGTACCCCCTGAAGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| 3UTR GCA 90 bp | CTCTTGATCTTCAGGGGGTACGTGTCTTCCAGCCAGCTCTCTTCCTaGCTCTGCTATCTTGCTGCTGGTGCAAGTTTGTACCTTGGGACT | + |
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Preference number: 1 (lower is better) Translates to: LLIFRGYVSSSQLSS*LCYLAAGASLYLGT Trigger: AGTCCCAAGGTACAAACTTGCACCAGCAGCAAGATAGCAGAGGCAGGAAGAGAGCTGGCTGGAAGACACGTACCCCCTGAAGATCAAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| 3UTR CCA 90 bp | CTCACAATCTTTGGCTCCCTCCTACCTCCAAGGATCATTTTTCTCTaGTTATCATACACAGGGACTCTGAGGGTGTTGCCCGCCTGCTTC | + |
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Preference number: 1 (lower is better) Translates to: LTIFGSLLPPRIIFL*LSYTGTLRVLPACF Trigger: GAAGCAGGCGGGCAACACCCTCAGAGTCCCTGTGTATGATAACCAGAGAAAAATGATCCTTGGAGGTAGGAGGGAGCCAAAGATTGTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| 3UTR TCA 90 bp | GGTCCCATCCCTCCCAGGTTTGGACTGGTACACGGGCTACTTTTCTaGTGTTTGAAGCGATTTCCAGAACCTCTTCTCCATTATTGCCTA | + |
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Preference number: 1 (lower is better) Translates to: GPIPPRFGLVHGLLF*CLKRFPEPLLHYCL Trigger: TAGGCAATAATGGAGAAGAGGTTCTGGAAATCGCTTCAAACATCAGAAAAGTAGCCCGTGTACCAGTCCAAACCTGGGAGGGATGGGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| 3UTR CCA 90 bp | TATTCAATGATCCGTTGCAGAGGCCACTCGTCCTCTCACAATCTTTaGCTCCCTCCTACCTCCAAGGATCATTTTTCTCTGGTTATCATA | + |
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Preference number: 1 (lower is better) Translates to: YSMIRCRGHSSSHNL*LPPTSKDHFSLVII Trigger: TATGATAACCAGAGAAAAATGATCCTTGGAGGTAGGAGGGAGCCAAAGATTGTGAGAGGACGAGTGGCCTCTGCAACGGATCATTGAATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| 3UTR-3UTR CCA 90 bp | TGTAGTACCAGGGCGACCTCCCTCTTGATCTTCAGGGGGTACGTGTCTTCCAGCGACATAGGGGTGGCGTaGGCACCTTGGAAAAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: CSTRATSLLIFRGYVSSSDIGVA*APWKKK Trigger: TTTCTTTTTCCAAGGTGCCCACGCCACCCCTATGTC...GCTGGAAGACACGTACCCCCTGAAGATCAAGAGGGAGGTCGCCCTGGTACTACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| 3UTR-3UTR CCA 90 bp | CCTCTTGATCTTCAGGGGGTACGTGTCTTCCAGCCAGCTCTCTTCCTGCCTCTGAGCAGGAGCATCATCTaGATTGTCAGGAGGTTAACT | + |
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Preference number: 2 (lower is better) Translates to: PLDLQGVRVFQPALFLPLSRSII*IVRRLT Trigger: AGTTAACCTCCTGACAATCCAGATGATGCTCCTGCT...CAGAGGCAGGAAGAGAGCTGGCTGGAAGACACGTACCCCCTGAAGATCAAGAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| 3UTR-3UTR CCA 90 bp | CCTCTTGATCTTCAGGGGGTACGTGTCTTCCAGCCAGCTCTCTTCCTGCCTCTGGTGGCGTGGGCACCTTaGAAAAAGAAAAACTTAATT | + |
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Preference number: 2 (lower is better) Translates to: PLDLQGVRVFQPALFLPLVAWAP*KKKNLI Trigger: AATTAAGTTTTTCTTTTTCCAAGGTGCCCACGCCAC...CAGAGGCAGGAAGAGAGCTGGCTGGAAGACACGTACCCCCTGAAGATCAAGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| 3UTR-3UTR TCA 90 bp | TCTTCCATTCCTGTCTATTTGGTTATAGAAAAGGGGAAAGGGACGACTTTCTCACATACACAGGGACTCTaGGGGTGTTGCCCGCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: SSIPVYLVIEKGKGTTFSHTQGL*GCCPPA Trigger: AGCAGGCGGGCAACACCCTCAGAGTCCCTGTGTATG...TGAGAAAGTCGTCCCTTTCCCCTTTTCTATAACCAAATAGACAGGAATGGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| 3UTR-3UTR CCA 90 bp | CCTCTTGATCTTCAGGGGGTACGTGTCTTCCAGCCAGCTCTCTTCCTGCCTCTGAGGATCATTTTTCTCTaGTTATCATACACAGGGACT | + |
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Preference number: 2 (lower is better) Translates to: PLDLQGVRVFQPALFLPLRIIFL*LSYTGT Trigger: AGTCCCTGTGTATGATAACCAGAGAAAAATGATCCT...CAGAGGCAGGAAGAGAGCTGGCTGGAAGACACGTACCCCCTGAAGATCAAGAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| 3UTR CAA 90 bp | GTATTCAATGATCCGTTGCAGAGGCCACTCGTCCTCTCACAATCTTaGGCTCCCTCCTACCTCCAAGGATCATTTTTCTCTGGTTATCAT | + |
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Preference number: 2 (lower is better) Translates to: VFNDPLQRPLVLSQS*APSYLQGSFFSGYH Trigger: ATGATAACCAGAGAAAAATGATCCTTGGAGGTAGGAGGGAGCCAAAGATTGTGAGAGGACGAGTGGCCTCTGCAACGGATCATTGAATAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| 3UTR-3UTR CCA 90 bp | GGAGAATCTTCCATTCCTGTCTATTTGGTTATAGAAAAGGGGAAAGGGACGACTTCCTCTCACAATCTTTaGCTCCCTCCTACCTCCAAG | + |
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Preference number: 2 (lower is better) Translates to: GESSIPVYLVIEKGKGTTSSHNL*LPPTSK Trigger: CTTGGAGGTAGGAGGGAGCCAAAGATTGTGAGAGGA...AGTCGTCCCTTTCCCCTTTTCTATAACCAAATAGACAGGAATGGAAGATTCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| 3UTR-3UTR TCA 90 bp | GATTGTCAGGAGGTTAACTGTAGTTTCAACAAGAGTTTTAATGGGATACCACAGAGTGCGATAACCCCATaGACCATCCTCTGCCCAAGT | + |
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Preference number: 2 (lower is better) Translates to: DCQEVNCSFNKSFNGIPQSAITP*TILCPS Trigger: ACTTGGGCAGAGGATGGTTCATGGGGTTATCGCACT...CTGTGGTATCCCATTAAAACTCTTGTTGAAACTACAGTTAACCTCCTGACAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| 3UTR-3UTR CCA 90 bp | GGAGAATCTTCCATTCCTGTCTATTTGGTTATAGAAAAGGGGAAAGGGACGACTCATCCTCTGCCCAAGTaGCAGGACCATAGTATTCAA | + |
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Preference number: 2 (lower is better) Translates to: GESSIPVYLVIEKGKGTTHPLPK*QDHSIQ Trigger: TTGAATACTATGGTCCTGCCACTTGGGCAGAGGATG...AGTCGTCCCTTTCCCCTTTTCTATAACCAAATAGACAGGAATGGAAGATTCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| 3UTR-3UTR CCA 90 bp | GATTTCCAGAACCTCTTCTCCATTATTGCCTATGTTAAGACAGCAATTGGAGATATTGCCGCGCGCATTTaGTTTTGTTGTTGCGCGAGC | + |
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Preference number: 2 (lower is better) Translates to: DFQNLFSIIAYVKTAIGDIAARI*FCCCAS Trigger: GCTCGCGCAACAACAAAACCAAATGCGCGCGGCAAT...ATCTCCAATTGCTGTCTTAACATAGGCAATAATGGAGAAGAGGTTCTGGAAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| 3UTR-3UTR TCA 90 bp | TCTTCCATTCCTGTCTATTTGGTTATAGAAAAGGGGAAAGGGACGACTTTCTCAAAAAAGAATCCAGGTTaGATTGTGCCTAGGAAGCAA | + |
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Preference number: 2 (lower is better) Translates to: SSIPVYLVIEKGKGTTFSKKNPG*IVPRKQ Trigger: TTGCTTCCTAGGCACAATTCAACCTGGATTCTTTTT...TGAGAAAGTCGTCCCTTTCCCCTTTTCTATAACCAAATAGACAGGAATGGAAGA 40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| 3UTR-3UTR CCA 90 bp | GATTTCCAGAACCTCTTCTCCATTATTGCCTATGTTAAGACAGCAATTGGAGATTCTAATCGCTCTATTTaGCATATATATGGGAGTGCG | + |
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Preference number: 2 (lower is better) Translates to: DFQNLFSIIAYVKTAIGDSNRSI*HIYGSA Trigger: CGCACTCCCATATATATGCCAAATAGAGCGATTAGA...ATCTCCAATTGCTGTCTTAACATAGGCAATAATGGAGAAGAGGTTCTGGAAATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| 3UTR CAA 90 bp | ACTTTTCTGATGTTTGAAGCGATTTCCAGAACCTCTTCTCCATTATaGCCTATGTTAAGACAGCAATTGGAGATGTTAAACTTACCACAG | + |
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Preference number: 2 (lower is better) Translates to: TFLMFEAISRTSSPL*PMLRQQLEMLNLPQ Trigger: CTGTGGTAAGTTTAACATCTCCAATTGCTGTCTTAACATAGGCAATAATGGAGAAGAGGTTCTGGAAATCGCTTCAAACATCAGAAAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| 3UTR TCA 72 bp | CGTGACTGCTATGTAGTACCAGGGCGACCTCCCTCTTaGTCTTCAGGGGGTACGTGTCTTCCAGCCAGCTCT | + |
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Preference number: 3 (lower is better) Translates to: RDCYVVPGRPPS*SSGGTCLPASS Trigger: AGAGCTGGCTGGAAGACACGTACCCCCTGAAGATCAAGAGGGAGGTCGCCCTGGTACTACATAGCAGTCACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| 3UTR-3UTR CAA 90 bp | CCTCTTGATCTTCAGGGGGTACGTGTCTTCCAGCCAGCTCTCTTCCTGCCTCTGGTATTCAATGATCCGTaGCAGAGGCCACTCGTCCTC | + |
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Preference number: 3 (lower is better) Translates to: PLDLQGVRVFQPALFLPLVFNDP*QRPLVL Trigger: GAGGACGAGTGGCCTCTGCAACGGATCATTGAATAC...CAGAGGCAGGAAGAGAGCTGGCTGGAAGACACGTACCCCCTGAAGATCAAGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| 3UTR GCA 72 bp | GGGTACGTGTCTTCCAGCCAGCTCTCTTCCTGCCTCTaGTATCTTGCTGCTGGTGCAAGTTTGTACCTTGGG | + |
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Preference number: 3 (lower is better) Translates to: GYVSSSQLSSCL*YLAAGASLYLG Trigger: CCCAAGGTACAAACTTGCACCAGCAGCAAGATAGCAGAGGCAGGAAGAGAGCTGGCTGGAAGACACGTACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| 3UTR CCA 72 bp | TTTGGCTCCCTCCTACCTCCAAGGATCATTTTTCTCTaGTTATCATACACAGGGACTCTGAGGGTGTTGCCC | + |
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Preference number: 3 (lower is better) Translates to: FGSLLPPRIIFL*LSYTGTLRVLP Trigger: GGGCAACACCCTCAGAGTCCCTGTGTATGATAACCAGAGAAAAATGATCCTTGGAGGTAGGAGGGAGCCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| 3UTR TCA 72 bp | CCTCCCAGGTTTGGACTGGTACACGGGCTACTTTTCTaGTGTTTGAAGCGATTTCCAGAACCTCTTCTCCAT | + |
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Preference number: 3 (lower is better) Translates to: PPRFGLVHGLLF*CLKRFPEPLLH Trigger: ATGGAGAAGAGGTTCTGGAAATCGCTTCAAACATCAGAAAAGTAGCCCGTGTACCAGTCCAAACCTGGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| 3UTR TCA 72 bp | GGTTTGGACTGGTACACGGGCTACTTTTCTGATGTTTaGAGCGATTTCCAGAACCTCTTCTCCATTATTGCC | + |
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Preference number: 3 (lower is better) Translates to: GLDWYTGYFSDV*SDFQNLFSIIA Trigger: GGCAATAATGGAGAAGAGGTTCTGGAAATCGCTTCAAACATCAGAAAAGTAGCCCGTGTACCAGTCCAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| 3UTR CCA 72 bp | TGTTGTTGCGCGAGCATTTCTAGGGCTGAGGCAGTTTaGTTAGTGATTATCTCTAGAACAGCTTGTAGTCTA | + |
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Preference number: 3 (lower is better) Translates to: CCCASISRAEAV*LVIISRTACSL Trigger: TAGACTACAAGCTGTTCTAGAGATAATCACTAACCAAACTGCCTCAGCCCTAGAAATGCTCGCGCAACAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| CDS-3UTR CCA 90 bp | CCTCTTGATCTTCAGGGGGTACGTGTCTTCCAGCCAGCTCTCTTCCTGCCTCTGTTTGTCCGGCTGCTGTaGCCTGCTTTCCCAGATGGA | + |
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Preference number: 4 (lower is better) Translates to: PLDLQGVRVFQPALFLPLFVRLL*PAFPDG Trigger: TCCATCTGGGAAAGCAGGCCACAGCAGCCGGACAAA...CAGAGGCAGGAAGAGAGCTGGCTGGAAGACACGTACCCCCTGAAGATCAAGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| CDS-3UTR GCA 90 bp | TGTAGTACCAGGGCGACCTCCCTCTTGATCTTCAGGGGGTACGTGTCTTCCAGCTTTGGAGGAAGAAGCTaGCTTGGGGGTGAGCTTGAC | + |
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Preference number: 4 (lower is better) Translates to: CSTRATSLLIFRGYVSSSFGGRS*LGGELD Trigger: GTCAAGCTCACCCCCAAGGCAGCTTCTTCCTCCAAA...GCTGGAAGACACGTACCCCCTGAAGATCAAGAGGGAGGTCGCCCTGGTACTACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| CDS-3UTR TCA 90 bp | TGTAGTACCAGGGCGACCTCCCTCTTGATCTTCAGGGGGTACGTGTCTTCCAGCGGTGGTAGCTTTTTGTaGGGGTCAGTTTGGCCGATA | + |
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Preference number: 4 (lower is better) Translates to: CSTRATSLLIFRGYVSSSGGSFL*GSVWPI Trigger: TATCGGCCAAACTGACCCTCACAAAAAGCTACCACC...GCTGGAAGACACGTACCCCCTGAAGATCAAGAGGGAGGTCGCCCTGGTACTACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| CDS-3UTR CCA 90 bp | CAAGTTTGTACCTTGGGACTGGGCCTGAGGAGGAGGAGTTATTCATCCCGCAAGCATCCCTCCCAGGTTTaGACTGGTACACGGGCTACT | + |
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Preference number: 4 (lower is better) Translates to: QVCTLGLGLRRRSYSSRKHPSQV*TGTRAT Trigger: AGTAGCCCGTGTACCAGTCCAAACCTGGGAGGGATG...CTTGCGGGATGAATAACTCCTCCTCCTCAGGCCCAGTCCCAAGGTACAAACTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| CDS-3UTR TCA 90 bp | CAAGTTTGTACCTTGGGACTGGGCCTGAGGAGGAGGAGTTATTCATCCCGCAAGAGTAGGCGAGATCAGTaGCCGATGTGCATGCACAGA | + |
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Preference number: 4 (lower is better) Translates to: QVCTLGLGLRRRSYSSRKSRRDQ*PMCMHR Trigger: TCTGTGCATGCACATCGGTCACTGATCTCGCCTACT...CTTGCGGGATGAATAACTCCTCCTCCTCAGGCCCAGTCCCAAGGTACAAACTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| CDS-3UTR CCA 90 bp | CAAGTTTGTACCTTGGGACTGGGCCTGAGGAGGAGGAGTTATTCATCCCGCAAGTCCTCTCACAATCTTTaGCTCCCTCCTACCTCCAAG | + |
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Preference number: 4 (lower is better) Translates to: QVCTLGLGLRRRSYSSRKSSHNL*LPPTSK Trigger: CTTGGAGGTAGGAGGGAGCCAAAGATTGTGAGAGGA...CTTGCGGGATGAATAACTCCTCCTCCTCAGGCCCAGTCCCAAGGTACAAACTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| CDS-3UTR CCA 90 bp | TGTAGTACCAGGGCGACCTCCCTCTTGATCTTCAGGGGGTACGTGTCTTCCAGCAGCAGGAGCATCATCTaGATTGTCAGGAGGTTAACT | + |
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Preference number: 4 (lower is better) Translates to: CSTRATSLLIFRGYVSSSSRSII*IVRRLT Trigger: AGTTAACCTCCTGACAATCCAGATGATGCTCCTGCT...GCTGGAAGACACGTACCCCCTGAAGATCAAGAGGGAGGTCGCCCTGGTACTACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| CDS-3UTR GCA 90 bp | GGAGAATCTTCCATTCCTGTCTATTTGGTTATAGAAAAGGGGAAAGGGACGACTCCGGCTGCTGTGGCCTaGTTTCCCAGATGGAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: GESSIPVYLVIEKGKGTTPAAVA*FPRWRG Trigger: ACCCCTCCATCTGGGAAAGCAGGCCACAGCAGCCGG...AGTCGTCCCTTTCCCCTTTTCTATAACCAAATAGACAGGAATGGAAGATTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| CDS-3UTR CCA 90 bp | CCTCTTGATCTTCAGGGGGTACGTGTCTTCCAGCCAGCTCTCTTCCTGCCTCTGAGGGCTGAGGCAGTTTaGTTAGTGATTATCTCTAGA | + |
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Preference number: 4 (lower is better) Translates to: PLDLQGVRVFQPALFLPLRAEAV*LVIISR Trigger: TCTAGAGATAATCACTAACCAAACTGCCTCAGCCCT...CAGAGGCAGGAAGAGAGCTGGCTGGAAGACACGTACCCCCTGAAGATCAAGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| CDS-3UTR TCA 90 bp | TGTAGTACCAGGGCGACCTCCCTCTTGATCTTCAGGGGGTACGTGTCTTCCAGCAAAAAGAATCCAGGTTaGATTGTGCCTAGGAAGCAA | + |
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Preference number: 4 (lower is better) Translates to: CSTRATSLLIFRGYVSSSKKNPG*IVPRKQ Trigger: TTGCTTCCTAGGCACAATTCAACCTGGATTCTTTTT...GCTGGAAGACACGTACCCCCTGAAGATCAAGAGGGAGGTCGCCCTGGTACTACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| CDS-3UTR TCA 90 bp | TCTTCCATTCCTGTCTATTTGGTTATAGAAAAGGGGAAAGGGACGACTTTCTCAGGGCGACCTCCCTCTTaGTCTTCAGGGGGTACGTGT | + |
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Preference number: 4 (lower is better) Translates to: SSIPVYLVIEKGKGTTFSGRPPS*SSGGTC Trigger: ACACGTACCCCCTGAAGATCAAGAGGGAGGTCGCCC...TGAGAAAGTCGTCCCTTTCCCCTTTTCTATAACCAAATAGACAGGAATGGAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| CDS-3UTR CCA 90 bp | TCTTCCATTCCTGTCTATTTGGTTATAGAAAAGGGGAAAGGGACGACTTTCTCACCAAGGCTCTTGCATTaGTTGGAACCCGGAGAGCGC | + |
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Preference number: 4 (lower is better) Translates to: SSIPVYLVIEKGKGTTFSPRLLH*LEPGER Trigger: GCGCTCTCCGGGTTCCAACCAATGCAAGAGCCTTGG...TGAGAAAGTCGTCCCTTTCCCCTTTTCTATAACCAAATAGACAGGAATGGAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| CDS-3UTR TCA 90 bp | ATCTTTGGCTCCCTCCTACCTCCAAGGATCATTTTTCTCTGGTTATCATACACATGGATGCAGACAGACTaGGGCCTAGAATGGCATCAG | + |
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Preference number: 4 (lower is better) Translates to: IFGSLLPPRIIFLWLSYTWMQTD*GLEWHQ Trigger: CTGATGCCATTCTAGGCCTCAGTCTGTCTGCATCCA...TGTGTATGATAACCAGAGAAAAATGATCCTTGGAGGTAGGAGGGAGCCAAAGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| CDS-3UTR GCA 90 bp | GATTTCCAGAACCTCTTCTCCATTATTGCCTATGTTAAGACAGCAATTGGAGATCAGCCCCAAGGCTCTTaGATTGGTTGGAACCCGGAG | + |
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Preference number: 4 (lower is better) Translates to: DFQNLFSIIAYVKTAIGDQPQGS*IGWNPE Trigger: CTCCGGGTTCCAACCAATGCAAGAGCCTTGGGGCTG...ATCTCCAATTGCTGTCTTAACATAGGCAATAATGGAGAAGAGGTTCTGGAAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| CDS-3UTR CCA 90 bp | TCTTCCATTCCTGTCTATTTGGTTATAGAAAAGGGGAAAGGGACGACTTTCTCAATTGCCGCGCGCATTTaGTTTTGTTGTTGCGCGAGC | + |
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Preference number: 4 (lower is better) Translates to: SSIPVYLVIEKGKGTTFSIAARI*FCCCAS Trigger: GCTCGCGCAACAACAAAACCAAATGCGCGCGGCAAT...TGAGAAAGTCGTCCCTTTCCCCTTTTCTATAACCAAATAGACAGGAATGGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| CDS-3UTR TCA 90 bp | ACTTTTCTGATGTTTGAAGCGATTTCCAGAACCTCTTCTCCATTATTGCCTATGAGTGCGATAACCCCATaGACCATCCTCTGCCCAAGT | + |
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Preference number: 4 (lower is better) Translates to: TFLMFEAISRTSSPLLPMSAITP*TILCPS Trigger: ACTTGGGCAGAGGATGGTTCATGGGGTTATCGCACT...CATAGGCAATAATGGAGAAGAGGTTCTGGAAATCGCTTCAAACATCAGAAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| CDS-3UTR TCA 90 bp | GATTGTCAGGAGGTTAACTGTAGTTTCAACAAGAGTTTTAATGGGATACCACAGTGCATGCAGACAGGCTaGGGCCTAAAATGGCATCAG | + |
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Preference number: 4 (lower is better) Translates to: DCQEVNCSFNKSFNGIPQCMQTG*GLKWHQ Trigger: CTGATGCCATTTTAGGCCTCAGCCTGTCTGCATGCA...CTGTGGTATCCCATTAAAACTCTTGTTGAAACTACAGTTAACCTCCTGACAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| CDS-3UTR GCA 90 bp | ACTTTTCTGATGTTTGAAGCGATTTCCAGAACCTCTTCTCCATTATTGCCTATGAGTGACCGATGTGCATaGACAGAGAGGCGACTAGAG | + |
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Preference number: 4 (lower is better) Translates to: TFLMFEAISRTSSPLLPMSDRCA*TERRLE Trigger: CTCTAGTCGCCTCTCTGTGCATGCACATCGGTCACT...CATAGGCAATAATGGAGAAGAGGTTCTGGAAATCGCTTCAAACATCAGAAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| CDS-3UTR CCA 90 bp | ATCTTTGGCTCCCTCCTACCTCCAAGGATCATTTTTCTCTGGTTATCATACACACATCCTCTGCCCAAGTaGCAGGACCATAGTATTCAA | + |
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Preference number: 4 (lower is better) Translates to: IFGSLLPPRIIFLWLSYTHPLPK*QDHSIQ Trigger: TTGAATACTATGGTCCTGCCACTTGGGCAGAGGATG...TGTGTATGATAACCAGAGAAAAATGATCCTTGGAGGTAGGAGGGAGCCAAAGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| CDS-3UTR CCA 90 bp | ACTTTTCTGATGTTTGAAGCGATTTCCAGAACCTCTTCTCCATTATTGCCTATGGACATAGGGGTGGCGTaGGCACCTTGGAAAAAGAAA | + |
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Preference number: 4 (lower is better) Translates to: TFLMFEAISRTSSPLLPMDIGVA*APWKKK Trigger: TTTCTTTTTCCAAGGTGCCCACGCCACCCCTATGTC...CATAGGCAATAATGGAGAAGAGGTTCTGGAAATCGCTTCAAACATCAGAAAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| CDS-3UTR GCA 90 bp | GATTGTCAGGAGGTTAACTGTAGTTTCAACAAGAGTTTTAATGGGATACCACAGCCTCTGCTATCTTGCTaGTGGTGCAAGTTTGTACCT | + |
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Preference number: 4 (lower is better) Translates to: DCQEVNCSFNKSFNGIPQPLLSC*WCKFVP Trigger: AGGTACAAACTTGCACCAGCAGCAAGATAGCAGAGG...CTGTGGTATCCCATTAAAACTCTTGTTGAAACTACAGTTAACCTCCTGACAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| CDS-3UTR CCA 90 bp | GATTGTCAGGAGGTTAACTGTAGTTTCAACAAGAGTTTTAATGGGATACCACAGCTGCTATCTTGCTGCTaGTGCAAGTTTGTACCTTGG | + |
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Preference number: 4 (lower is better) Translates to: DCQEVNCSFNKSFNGIPQLLSCC*CKFVPW Trigger: CCAAGGTACAAACTTGCACCAGCAGCAAGATAGCAG...CTGTGGTATCCCATTAAAACTCTTGTTGAAACTACAGTTAACCTCCTGACAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| CDS-3UTR CCA 90 bp | TCTTCCATTCCTGTCTATTTGGTTATAGAAAAGGGGAAAGGGACGACTTTCTCAAGGATCATTTTTCTCTaGTTATCATACACAGGGACT | + |
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Preference number: 4 (lower is better) Translates to: SSIPVYLVIEKGKGTTFSRIIFL*LSYTGT Trigger: AGTCCCTGTGTATGATAACCAGAGAAAAATGATCCT...TGAGAAAGTCGTCCCTTTCCCCTTTTCTATAACCAAATAGACAGGAATGGAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| CDS-3UTR CCA 90 bp | ACTTTTCTGATGTTTGAAGCGATTTCCAGAACCTCTTCTCCATTATTGCCTATGTCTAATCGCTCTATTTaGCATATATATGGGAGTGCG | + |
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Preference number: 4 (lower is better) Translates to: TFLMFEAISRTSSPLLPMSNRSI*HIYGSA Trigger: CGCACTCCCATATATATGCCAAATAGAGCGATTAGA...CATAGGCAATAATGGAGAAGAGGTTCTGGAAATCGCTTCAAACATCAGAAAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| CDS-3UTR CCA 90 bp | GATTTCCAGAACCTCTTCTCCATTATTGCCTATGTTAAGACAGCAATTGGAGATGTGGCGTGGGCACCTTaGAAAAAGAAAAACTTAATT | + |
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Preference number: 4 (lower is better) Translates to: DFQNLFSIIAYVKTAIGDVAWAP*KKKNLI Trigger: AATTAAGTTTTTCTTTTTCCAAGGTGCCCACGCCAC...ATCTCCAATTGCTGTCTTAACATAGGCAATAATGGAGAAGAGGTTCTGGAAATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| CDS CCA 90 bp | GCCCCTCGCAGGTTTCAGGGCCAGCCCCAAGGCTCTTGCATTGGTTaGAACCCGGAGAGCGCGCCAACAGACAACACGAGGCGGTGTGGA | + |
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Preference number: 5 (lower is better) Translates to: APRRFQGQPQGSCIG*NPESAPTDNTRRCG Trigger: TCCACACCGCCTCGTGTTGTCTGTTGGCGCGCTCTCCGGGTTCCAACCAATGCAAGAGCCTTGGGGCTGGCCCTGAAACCTGCGAGGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| CDS CCA 90 bp | GGAAGCCCCTCGCAGGTTTCAGGGCCAGCCCCAAGGCTCTTGCATTaGTTGGAACCCGGAGAGCGCGCCAACAGACAACACGAGGCGGTG | + |
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Preference number: 5 (lower is better) Translates to: GSPSQVSGPAPRLLH*LEPGERANRQHEAV Trigger: CACCGCCTCGTGTTGTCTGTTGGCGCGCTCTCCGGGTTCCAACCAATGCAAGAGCCTTGGGGCTGGCCCTGAAACCTGCGAGGGGCTTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| CDS GCA 90 bp | TGGACGGAAGCCCCTCGCAGGTTTCAGGGCCAGCCCCAAGGCTCTTaGATTGGTTGGAACCCGGAGAGCGCGCCAACAGACAACACGAGG | + |
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Preference number: 5 (lower is better) Translates to: WTEAPRRFQGQPQGS*IGWNPESAPTDNTR Trigger: CCTCGTGTTGTCTGTTGGCGCGCTCTCCGGGTTCCAACCAATGCAAGAGCCTTGGGGCTGGCCCTGAAACCTGCGAGGGGCTTCCGTCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| CDS-3UTR CAA 90 bp | CAAGTTTGTACCTTGGGACTGGGCCTGAGGAGGAGGAGTTATTCATCCCGCAAGGAGGAAGAAGCTGCCTaGGGGGTGAGCTTGACCCTG | + |
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Preference number: 5 (lower is better) Translates to: QVCTLGLGLRRRSYSSRKEEEAA*GVSLTL Trigger: CAGGGTCAAGCTCACCCCCAAGGCAGCTTCTTCCTC...CTTGCGGGATGAATAACTCCTCCTCCTCAGGCCCAGTCCCAAGGTACAAACTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| CDS-3UTR CAA 90 bp | CAAGTTTGTACCTTGGGACTGGGCCTGAGGAGGAGGAGTTATTCATCCCGCAAGTTAGCTGTTAATGTTTaGGAGGAAGAAGCTGCCTTG | + |
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Preference number: 5 (lower is better) Translates to: QVCTLGLGLRRRSYSSRKLAVNV*EEEAAL Trigger: CAAGGCAGCTTCTTCCTCCAAAACATTAACAGCTAA...CTTGCGGGATGAATAACTCCTCCTCCTCAGGCCCAGTCCCAAGGTACAAACTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| CDS-3UTR CAA 90 bp | ACTTTTCTGATGTTTGAAGCGATTTCCAGAACCTCTTCTCCATTATTGCCTATGCCAGCCCCAAGGCTCTaGCATTGGTTGGAACCCGGA | + |
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Preference number: 5 (lower is better) Translates to: TFLMFEAISRTSSPLLPMPAPRL*HWLEPG Trigger: TCCGGGTTCCAACCAATGCAAGAGCCTTGGGGCTGG...CATAGGCAATAATGGAGAAGAGGTTCTGGAAATCGCTTCAAACATCAGAAAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| CDS-3UTR CAA 90 bp | GGAGAATCTTCCATTCCTGTCTATTTGGTTATAGAAAAGGGGAAAGGGACGACTGTATTCAATGATCCGTaGCAGAGGCCACTCGTCCTC | + |
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Preference number: 5 (lower is better) Translates to: GESSIPVYLVIEKGKGTTVFNDP*QRPLVL Trigger: GAGGACGAGTGGCCTCTGCAACGGATCATTGAATAC...AGTCGTCCCTTTCCCCTTTTCTATAACCAAATAGACAGGAATGGAAGATTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| CDS-3UTR CAA 90 bp | TCTTCCATTCCTGTCTATTTGGTTATAGAAAAGGGGAAAGGGACGACTTTCTCAGGTGGCGTGGGCACCTaGGAAAAAGAAAAACTTAAT | + |
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Preference number: 5 (lower is better) Translates to: SSIPVYLVIEKGKGTTFSGGVGT*EKEKLN Trigger: ATTAAGTTTTTCTTTTTCCAAGGTGCCCACGCCACC...TGAGAAAGTCGTCCCTTTCCCCTTTTCTATAACCAAATAGACAGGAATGGAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| CDS-3UTR CAA 90 bp | GATTGTCAGGAGGTTAACTGTAGTTTCAACAAGAGTTTTAATGGGATACCACAGCTCTGTAAACAGGAATaGTCCCAGCCTAACGTGACT | + |
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Preference number: 5 (lower is better) Translates to: DCQEVNCSFNKSFNGIPQLCKQE*SQPNVT Trigger: AGTCACGTTAGGCTGGGACAATTCCTGTTTACAGAG...CTGTGGTATCCCATTAAAACTCTTGTTGAAACTACAGTTAACCTCCTGACAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| CDS-3UTR CAA 90 bp | TCTTCCATTCCTGTCTATTTGGTTATAGAAAAGGGGAAAGGGACGACTTTCTCAGTAAGTAAAGTATTGTaGCATCTCCCCTCTGTAGTG | + |
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Preference number: 5 (lower is better) Translates to: SSIPVYLVIEKGKGTTFSVSKVL*HLPSVV Trigger: CACTACAGAGGGGAGATGCAACAATACTTTACTTAC...TGAGAAAGTCGTCCCTTTCCCCTTTTCTATAACCAAATAGACAGGAATGGAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| CDS-3UTR CAA 90 bp | ACTTTTCTGATGTTTGAAGCGATTTCCAGAACCTCTTCTCCATTATTGCCTATGTCCATTCCTGTCTATTaGGTTATAGAAAAGGGGAAA | + |
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Preference number: 5 (lower is better) Translates to: TFLMFEAISRTSSPLLPMSIPVY*VIEKGK Trigger: TTTCCCCTTTTCTATAACCAAATAGACAGGAATGGA...CATAGGCAATAATGGAGAAGAGGTTCTGGAAATCGCTTCAAACATCAGAAAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| CDS GCA 72 bp | GCCCCTCGCAGGTTTCAGGGCCAGCCCCAAGGCTCTTaGATTGGTTGGAACCCGGAGAGCGCGCCAACAGAC | + |
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Preference number: 6 (lower is better) Translates to: APRRFQGQPQGS*IGWNPESAPTD Trigger: GTCTGTTGGCGCGCTCTCCGGGTTCCAACCAATGCAAGAGCCTTGGGGCTGGCCCTGAAACCTGCGAGGGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| CDS CAA 90 bp | AGCCCCTCGCAGGTTTCAGGGCCAGCCCCAAGGCTCTTGCATTGGTaGGAACCCGGAGAGCGCGCCAACAGACAACACGAGGCGGTGTGG | + |
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Preference number: 6 (lower is better) Translates to: SPSQVSGPAPRLLHW*EPGERANRQHEAVW Trigger: CCACACCGCCTCGTGTTGTCTGTTGGCGCGCTCTCCGGGTTCCAACCAATGCAAGAGCCTTGGGGCTGGCCCTGAAACCTGCGAGGGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| CDS CAA 90 bp | CGGAAGCCCCTCGCAGGTTTCAGGGCCAGCCCCAAGGCTCTTGCATaGGTTGGAACCCGGAGAGCGCGCCAACAGACAACACGAGGCGGT | + |
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Preference number: 6 (lower is better) Translates to: RKPLAGFRASPKALA*VGTRRARQQTTRGG Trigger: ACCGCCTCGTGTTGTCTGTTGGCGCGCTCTCCGGGTTCCAACCAATGCAAGAGCCTTGGGGCTGGCCCTGAAACCTGCGAGGGGCTTCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| CDS CAA 90 bp | GTGGACGGAAGCCCCTCGCAGGTTTCAGGGCCAGCCCCAAGGCTCTaGCATTGGTTGGAACCCGGAGAGCGCGCCAACAGACAACACGAG | + |
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Preference number: 6 (lower is better) Translates to: VDGSPSQVSGPAPRL*HWLEPGERANRQHE Trigger: CTCGTGTTGTCTGTTGGCGCGCTCTCCGGGTTCCAACCAATGCAAGAGCCTTGGGGCTGGCCCTGAAACCTGCGAGGGGCTTCCGTCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| CDS CCA 72 bp | TTCCTTTGTCCGGCTGCTGTGGCCTGCTTTCCCAGATaGAGGGGTGGTAGGTCCACTGGGGACGTGGACGGA | + |
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Preference number: 6 (lower is better) Translates to: FLCPAAVACFPR*RGGRSTGDVDG Trigger: TCCGTCCACGTCCCCAGTGGACCTACCACCCCTCCATCTGGGAAAGCAGGCCACAGCAGCCGGACAAAGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| CDS CCA 72 bp | AGGTTTCAGGGCCAGCCCCAAGGCTCTTGCATTGGTTaGAACCCGGAGAGCGCGCCAACAGACAACACGAGG | + |
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Preference number: 6 (lower is better) Translates to: RFQGQPQGSCIG*NPESAPTDNTR Trigger: CCTCGTGTTGTCTGTTGGCGCGCTCTCCGGGTTCCAACCAATGCAAGAGCCTTGGGGCTGGCCCTGAAACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| CDS CCA 72 bp | TCGCAGGTTTCAGGGCCAGCCCCAAGGCTCTTGCATTaGTTGGAACCCGGAGAGCGCGCCAACAGACAACAC | + |
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Preference number: 6 (lower is better) Translates to: SQVSGPAPRLLH*LEPGERANRQH Trigger: GTGTTGTCTGTTGGCGCGCTCTCCGGGTTCCAACCAATGCAAGAGCCTTGGGGCTGGCCCTGAAACCTGCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| CDS CAA 72 bp | CAGGTTTCAGGGCCAGCCCCAAGGCTCTTGCATTGGTaGGAACCCGGAGAGCGCGCCAACAGACAACACGAG | + |
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Preference number: 6 (lower is better) Translates to: QVSGPAPRLLHW*EPGERANRQHE Trigger: CTCGTGTTGTCTGTTGGCGCGCTCTCCGGGTTCCAACCAATGCAAGAGCCTTGGGGCTGGCCCTGAAACCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| CDS CAA 72 bp | CTCGCAGGTTTCAGGGCCAGCCCCAAGGCTCTTGCATaGGTTGGAACCCGGAGAGCGCGCCAACAGACAACA | + |
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Preference number: 6 (lower is better) Translates to: LAGFRASPKALA*VGTRRARQQTT Trigger: TGTTGTCTGTTGGCGCGCTCTCCGGGTTCCAACCAATGCAAGAGCCTTGGGGCTGGCCCTGAAACCTGCGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| CDS CAA 72 bp | TTGGGGGTGAGCTTGACCCTGGTGCGATGGATCCAGTaGGGGAGTCCTCGGACTCTCACTGCAGTTGGTGTG | + |
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Preference number: 6 (lower is better) Translates to: LGVSLTLVRWIQ*GSPRTLTAVGV Trigger: CACACCAACTGCAGTGAGAGTCCGAGGACTCCCCAACTGGATCCATCGCACCAGGGTCAAGCTCACCCCCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| CDS TCA 72 bp | GCCGATAAACACGTCTGTGCCAGTAGGCGAGATCAGTaGCCGATGTGCATGCACAGAGAGGCGACTAGAGGC | + |
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Preference number: 6 (lower is better) Translates to: ADKHVCASRRDQ*PMCMHREATRG Trigger: GCCTCTAGTCGCCTCTCTGTGCATGCACATCGGTCACTGATCTCGCCTACTGGCACAGACGTGTTTATCGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| CDS GCA 72 bp | TCTGTGCCAGTAGGCGAGATCAGTGACCGATGTGCATaGACAGAGAGGCGACTAGAGGCTGAGGAGCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: SVPVGEISDRCA*TERRLEAEELP Trigger: AGGAAGCTCCTCAGCCTCTAGTCGCCTCTCTGTGCATGCACATCGGTCACTGATCTCGCCTACTGGCACAGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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| CDS CAA 72 bp | GAAATTGGCCCAGACAAACACTTAGCTGTTAATGTTTaGGAGGAAGAAGCTGCCTTGGGGGTGAGCTTGACC | + |
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Preference number: 6 (lower is better) Translates to: EIGPDKHLAVNV*EEEAALGVSLT Trigger: GGTCAAGCTCACCCCCAAGGCAGCTTCTTCCTCCAAAACATTAACAGCTAAGTGTTTGTCTGGGCCAATTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000447535.1 |
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