RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ERRFI1 (Homo sapiens)

Ensembl gene IDs: ENSG00000116285

Ensembl transcript IDs: ENST00000377482.10, ENST00000467067.1, ENST00000469499.5, ENST00000474874.5, ENST00000487559.1

Found 300 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTAAGACGGAAGGCTTTTGGGACTCGGTGTGCGCGAGTTACTCGGTaGCAAAGGTTCTCTTGGCGGTACTTTGGGAGGCCTGTCTTCATC +
Preference number: 1 (lower is better)
Translates to: VRRKAFGTRCARVTR*QRFSWRYFGRPVFI
Trigger: GATGAAGACAGGCCTCCCAAAGTACCGCCAAGAGAACCTTTGTCACCGAGTAACTCGCGCACACCGAGTCCCAAAAGCCTTCCGTCTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467067.1
3UTR TCA 90 bp AGGGAGAGAGCACCCCAGCTACCTATGCTTCCACAGCTTTCTTCCTaGGTGAAACACTTGACTGCTGTCACCCCGAGAACACCCATGCAA +
Preference number: 1 (lower is better)
Translates to: RERAPQLPMLPQLSS*VKHLTAVTPRTPMQ
Trigger: TTGCATGGGTGTTCTCGGGGTGACAGCAGTCAAGTGTTTCACTCAGGAAGAAAGCTGTGGAAGCATAGGTAGCTGGGGTGCTCTCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467067.1
3UTR GCA 90 bp GCAAGGAACCTTACTGGCAGATCCTTCGCTGTTCTGTCTTTGCAGTaGTTTGCTGCTGACATACTTGGGATCAGGGGCAAAGCTCTGTGT +
Preference number: 1 (lower is better)
Translates to: ARNLTGRSFAVLSLQ*FAADILGIRGKALC
Trigger: ACACAGAGCTTTGCCCCTGATCCCAAGTATGTCAGCAGCAAAGCACTGCAAAGACAGAACAGCGAAGGATCTGCCAGTAAGGTTCCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467067.1
3UTR CCA 90 bp AGCTTCCATCACGTGAGACACCTTGGAGGACAAAGCCACATTGTGTaGAGGAAAACACACCACCATTCAGGCCCATCGTCATCCTGCTTT +
Preference number: 1 (lower is better)
Translates to: SFHHVRHLGGQSHIV*RKTHHHSGPSSSCF
Trigger: AAAGCAGGATGACGATGGGCCTGAATGGTGGTGTGTTTTCCTCCACACAATGTGGCTTTGTCCTCCAAGGTGTCTCACGTGATGGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474874.5
3UTR GCA 90 bp GCTACCTATGCTTCCACAGCTTTCTTCCTGAGTGAAACACTTGACTaGTGTCACCCCGAGAACACCCATGCAACCACCACAGGTGTAATT +
Preference number: 1 (lower is better)
Translates to: ATYASTAFFLSETLD*CHPENTHATTTGVI
Trigger: AATTACACCTGTGGTGGTTGCATGGGTGTTCTCGGGGTGACAGCAGTCAAGTGTTTCACTCAGGAAGAAAGCTGTGGAAGCATAGGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467067.1
3UTR GCA 90 bp CACATAGCTGAGATCTGCTGCAGAAACAGCTGGGGTATCAAAATATaGATAGTTGATTTGTCCACACCCACGGAAGCTTCGCCTGCCAGG +
Preference number: 1 (lower is better)
Translates to: HIAEICCRNSWGIKI*IVDLSTPTEASPAR
Trigger: CCTGGCAGGCGAAGCTTCCGTGGGTGTGGACAAATCAACTATGCATATTTTGATACCCCAGCTGTTTCTGCAGCAGATCTCAGCTATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467067.1
ENST00000469499.5
3UTR GCA 90 bp AGAATGCAAGGAACCTTACTGGCAGATCCTTCGCTGTTCTGTCTTTaGAGTGCTTTGCTGCTGACATACTTGGGATCAGGGGCAAAGCTC +
Preference number: 1 (lower is better)
Translates to: RMQGTLLADPSLFCL*SALLLTYLGSGAKL
Trigger: GAGCTTTGCCCCTGATCCCAAGTATGTCAGCAGCAAAGCACTGCAAAGACAGAACAGCGAAGGATCTGCCAGTAAGGTTCCTTGCATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467067.1
3UTR TCA 90 bp GGGAGGCCTGTCTTCATCACTATAGGTGCTCGAAGTAACTTCTGCTaGCCATCTTCTATAATCTGGCTTTACTGGTCTAGGAGGTATGGG +
Preference number: 1 (lower is better)
Translates to: GRPVFITIGARSNFC*PSSIIWLYWSRRYG
Trigger: CCCATACCTCCTAGACCAGTAAAGCCAGATTATAGAAGATGGTCAGCAGAAGTTACTTCGAGCACCTATAGTGATGAAGACAGGCCTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467067.1
3UTR GCA 90 bp TGTGGTTCAAAGAACAAACTATCTCCTCTATCTCCCTTGGACATGTaGACAGCGCACACCCACACATCACAGGCAAGTTTTGTGACGTGT +
Preference number: 1 (lower is better)
Translates to: CGSKNKLSPLSPLDM*TAHTHTSQASFVTC
Trigger: ACACGTCACAAAACTTGCCTGTGATGTGTGGGTGTGCGCTGTGCACATGTCCAAGGGAGATAGAGGAGATAGTTTGTTCTTTGAACCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467067.1
3UTR TCA 90 bp GATGTGAAAATCGGAACACCAACTATGTGTCTCACTGCATCTAAGTaGAGCAGCCACAGCTGTGAGAGTTTTCAAAGCAGAAAGATGCTG +
Preference number: 1 (lower is better)
Translates to: DVKIGTPTMCLTASK*SSHSCESFQSRKML
Trigger: CAGCATCTTTCTGCTTTGAAAACTCTCACAGCTGTGGCTGCTTCACTTAGATGCAGTGAGACACATAGTTGGTGTTCCGATTTTCACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377482.10
3UTR CCA 90 bp TCCATTTTGGTCAGACACATAGCTGAGATCTGCTGCAGAAACAGCTaGGGTATCAAAATATGCATAGTTGATTTGTCCACACCCACGGAA +
Preference number: 1 (lower is better)
Translates to: SILVRHIAEICCRNS*GIKICIVDLSTPTE
Trigger: TTCCGTGGGTGTGGACAAATCAACTATGCATATTTTGATACCCCAGCTGTTTCTGCAGCAGATCTCAGCTATGTGTCTGACCAAAATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467067.1
ENST00000469499.5
3UTR TCA 90 bp TTGCCATTTAAGACATGCGACCATACTAGGCACGTAGGGTACCAATaGGATAAGACAAAGTCCTTATTGCTGGCACATCATAATATTGTG +
Preference number: 1 (lower is better)
Translates to: LPFKTCDHTRHVGYQ*DKTKSLLLAHHNIV
Trigger: CACAATATTATGATGTGCCAGCAATAAGGACTTTGTCTTATCTCATTGGTACCCTACGTGCCTAGTATGGTCGCATGTCTTAAATGGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467067.1
3UTR TCA 90 bp TCTCGCCTAAGGTTTCATGAAGTAAAGTATGCATCAGAGCTGGAATaGGAACTAATTCTTGATTTTAGAAGATCCCACGTCCATGAACAG +
Preference number: 1 (lower is better)
Translates to: SRLRFHEVKYASELE*ELILDFRRSHVHEQ
Trigger: CTGTTCATGGACGTGGGATCTTCTAAAATCAAGAATTAGTTCTCATTCCAGCTCTGATGCATACTTTACTTCATGAAACCTTAGGCGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467067.1
3UTR TCA 90 bp AATGAGATAAGACAAAGTCCTTATTGCTGGCACATCATAATATTGTaGGTGAATGGACTTGCCTGCAATGTGTTCAGTTCACACACAGCT +
Preference number: 1 (lower is better)
Translates to: NEIRQSPYCWHIIIL*VNGLACNVFSSHTA
Trigger: AGCTGTGTGTGAACTGAACACATTGCAGGCAAGTCCATTCACTCACAATATTATGATGTGCCAGCAATAAGGACTTTGTCTTATCTCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467067.1
3UTR CAA 90 bp TTTTGGGACTCGGTGTGCGCGAGTTACTCGGTGACAAAGGTTCTCTaGGCGGTACTTTGGGAGGCCTGTCTTCATCACTATAGGTGCTCG +
Preference number: 2 (lower is better)
Translates to: FWDSVCASYSVTKVL*AVLWEACLHHYRCS
Trigger: CGAGCACCTATAGTGATGAAGACAGGCCTCCCAAAGTACCGCCAAGAGAACCTTTGTCACCGAGTAACTCGCGCACACCGAGTCCCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467067.1
3UTR CAA 90 bp GGAACCTTACTGGCAGATCCTTCGCTGTTCTGTCTTTGCAGTGCTTaGCTGCTGACATACTTGGGATCAGGGGCAAAGCTCTGTGTCGGG +
Preference number: 2 (lower is better)
Translates to: GTLLADPSLFCLCSA*LLTYLGSGAKLCVG
Trigger: CCCGACACAGAGCTTTGCCCCTGATCCCAAGTATGTCAGCAGCAAAGCACTGCAAAGACAGAACAGCGAAGGATCTGCCAGTAAGGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467067.1
3UTR-3UTR TCA 90 bp AGGAGCCAGCTGGTCCCGAATGAGACCTTCTTAATCTTCGGTGGGTCTGAGGTGCTACTTAGCAATCAGTaGCTCAGAATGAAGGCAGTC +
Preference number: 2 (lower is better)
Translates to: RSQLVPNETFLIFGGSEVLLSNQ*LRMKAV
Trigger: GACTGCCTTCATTCTGAGTCACTGATTGCTAAGTAG...CACCTCAGACCCACCGAAGATTAAGAAGGTCTCATTCGGGACCAGCTGGCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467067.1
3UTR-3UTR TCA 90 bp ACCATTTTCTGCAAAGCAGTGGCCATTCATCGGAGCAGATTTGGAAGCATGCCCGGTATTAGGCGCTCCTaGGCAGAAGAGTTCAGACTG +
Preference number: 2 (lower is better)
Translates to: TIFCKAVAIHRSRFGSMPGIRRS*AEEFRL
Trigger: CAGTCTGAACTCTTCTGCTCAGGAGCGCCTAATACC...GGGCATGCTTCCAAATCTGCTCCGATGAATGGCCACTGCTTTGCAGAAAATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487559.1
3UTR-3UTR GCA 90 bp TCCACCTGTGTGAGGGAGAGAGCACCCCAGCTACCTATGCTTCCACAGCTTTCTATACTGTACCAGCCTTaGCATTTAAGACATGCGACC +
Preference number: 2 (lower is better)
Translates to: STCVRERAPQLPMLPQLSILYQP*HLRHAT
Trigger: GGTCGCATGTCTTAAATGGCAAGGCTGGTACAGTAT...AGAAAGCTGTGGAAGCATAGGTAGCTGGGGTGCTCTCTCCCTCACACAGGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467067.1
3UTR CAA 90 bp CAGAATGCAAGGAACCTTACTGGCAGATCCTTCGCTGTTCTGTCTTaGCAGTGCTTTGCTGCTGACATACTTGGGATCAGGGGCAAAGCT +
Preference number: 2 (lower is better)
Translates to: QNARNLTGRSFAVLS*QCFAADILGIRGKA
Trigger: AGCTTTGCCCCTGATCCCAAGTATGTCAGCAGCAAAGCACTGCAAAGACAGAACAGCGAAGGATCTGCCAGTAAGGTTCCTTGCATTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467067.1
3UTR-3UTR GCA 90 bp AAAGCAGTGGCCATTCATCGGAGCAGATTTGGAAGCATGCCCTGGAATGAACGAAGTGAAACACTTGACTaGTGTCACCCCGAGAACACC +
Preference number: 2 (lower is better)
Translates to: KAVAIHRSRFGSMPWNERSETLD*CHPENT
Trigger: GGTGTTCTCGGGGTGACAGCAGTCAAGTGTTTCACT...TCGTTCATTCCAGGGCATGCTTCCAAATCTGCTCCGATGAATGGCCACTGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467067.1
3UTR-3UTR GCA 90 bp GCTGTTCTGTCTTTGCAGTGCTTTGCTGCTGACATACTTGGGATCAGGGGCAAAATAGCTGAGATCTGCTaGAGAAACAGCTGGGGTATC +
Preference number: 2 (lower is better)
Translates to: AVLSLQCFAADILGIRGKIAEIC*RNSWGI
Trigger: GATACCCCAGCTGTTTCTGCAGCAGATCTCAGCTAT...TTTGCCCCTGATCCCAAGTATGTCAGCAGCAAAGCACTGCAAAGACAGAACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000467067.1
3UTR CAA 90 bp GGTTTGTCTTCATCGGAGTTAGGAGAAGCTCTGTGTATACAACAGTaGGATATCCTTATGGCTGGCTTGTTAAAGGAGCCAGCTGGTCCC +
Preference number: 2 (lower is better)
Translates to: GLSSSELGEALCIQQ*DILMAGLLKEPAGP
Trigger: GGGACCAGCTGGCTCCTTTAACAAGCCAGCCATAAGGATATCCAACTGTTGTATACACAGAGCTTCTCCTAACTCCGATGAAGACAAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467067.1
ENST00000469499.5
3UTR-3UTR TCA 90 bp AAGGTTCTCTTGGCGGTACTTTGGGAGGCCTGTCTTCATCACTATAGGTGCTCGATCAGTGACTCAGAATaGAGGCAGTCGAGTACAATA +
Preference number: 2 (lower is better)
Translates to: KVLLAVLWEACLHHYRCSISDSE*RQSSTI
Trigger: TATTGTACTCGACTGCCTTCATTCTGAGTCACTGAT...CGAGCACCTATAGTGATGAAGACAGGCCTCCCAAAGTACCGCCAAGAGAACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467067.1
3UTR-3UTR GCA 90 bp CATCTGAGTCTAACGTACCCCACTGCCTCTAATACGGCCCGCACTACGATGAGCACTAATTGGTTAACCTaGAGCTATGGTCTATGGTTA +
Preference number: 2 (lower is better)
Translates to: HLSLTYPTASNTARTTMSTNWLT*SYGLWL
Trigger: TAACCATAGACCATAGCTGCAGGTTAACCAATTAGT...GCTCATCGTAGTGCGGGCCGTATTAGAGGCAGTGGGGTACGTTAGACTCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377482.10
3UTR-3UTR GCA 90 bp AAAGCAGTGGCCATTCATCGGAGCAGATTTGGAAGCATGCCCTGGAATGAACGAGTGAGTGAATGGACTTaGCTGCAATGTGTTCAGTTC +
Preference number: 2 (lower is better)
Translates to: KAVAIHRSRFGSMPWNERVSEWT*LQCVQF
Trigger: GAACTGAACACATTGCAGGCAAGTCCATTCACTCAC...TCGTTCATTCCAGGGCATGCTTCCAAATCTGCTCCGATGAATGGCCACTGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467067.1
3UTR-3UTR GCA 90 bp AAGGTTCTCTTGGCGGTACTTTGGGAGGCCTGTCTTCATCACTATAGGTGCTCGAGATGGACCATTTTCTaGAAAGCAGTGGCCATTCAT +
Preference number: 2 (lower is better)
Translates to: KVLLAVLWEACLHHYRCSRWTIF*KAVAIH
Trigger: ATGAATGGCCACTGCTTTGCAGAAAATGGTCCATCT...CGAGCACCTATAGTGATGAAGACAGGCCTCCCAAAGTACCGCCAAGAGAACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467067.1
3UTR-3UTR CCA 90 bp AAGACGGAAGGCTTTTGGGACTCGGTGTGCGCGAGTTACTCGGTGACAAAGGTTTGCTGCAGAAACAGCTaGGGTATCAAAATATGCATA +
Preference number: 2 (lower is better)
Translates to: KTEGFWDSVCASYSVTKVCCRNS*GIKICI
Trigger: TATGCATATTTTGATACCCCAGCTGTTTCTGCAGCA...AACCTTTGTCACCGAGTAACTCGCGCACACCGAGTCCCAAAAGCCTTCCGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467067.1
3UTR-3UTR CCA 90 bp AAGGTTCTCTTGGCGGTACTTTGGGAGGCCTGTCTTCATCACTATAGGTGCTCGATAATCTGGCTTTACTaGTCTAGGAGGTATGGGAAC +
Preference number: 2 (lower is better)
Translates to: KVLLAVLWEACLHHYRCSIIWLY*SRRYGN
Trigger: GTTCCCATACCTCCTAGACCAGTAAAGCCAGATTAT...CGAGCACCTATAGTGATGAAGACAGGCCTCCCAAAGTACCGCCAAGAGAACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467067.1
3UTR CAA 90 bp ATCTGCTGCAGAAACAGCTGGGGTATCAAAATATGCATAGTTGATTaGTCCACACCCACGGAAGCTTCGCCTGCCAGGAACATCATATTT +
Preference number: 2 (lower is better)
Translates to: ICCRNSWGIKICIVD*STPTEASPARNIIF
Trigger: AAATATGATGTTCCTGGCAGGCGAAGCTTCCGTGGGTGTGGACAAATCAACTATGCATATTTTGATACCCCAGCTGTTTCTGCAGCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467067.1
ENST00000469499.5
3UTR-3UTR TCA 90 bp GTGTATACAACAGTTGGATATCCTTATGGCTGGCTTGTTAAAGGAGCCAGCTGGAAGATCCCACGTCCATaGACAGTCCTACTTAGCAAT +
Preference number: 2 (lower is better)
Translates to: VYTTVGYPYGWLVKGASWKIPRP*TVLLSN
Trigger: ATTGCTAAGTAGGACTGTTCATGGACGTGGGATCTT...CCAGCTGGCTCCTTTAACAAGCCAGCCATAAGGATATCCAACTGTTGTATACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467067.1
3UTR-3UTR TCA 90 bp ACCTCCATTTTGGTCAGACACATAGCTGAGATCTGCTGCAGAAACAGCTGGGGTTCGCCTAAGGTTTCATaGAGTAAAGTATGCATCAGA +
Preference number: 2 (lower is better)
Translates to: TSILVRHIAEICCRNSWGSPKVS*SKVCIR
Trigger: TCTGATGCATACTTTACTTCATGAAACCTTAGGCGA...ACCCCAGCTGTTTCTGCAGCAGATCTCAGCTATGTGTCTGACCAAAATGGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467067.1
3UTR-3UTR GCA 90 bp GGTTTGTCTTCATCGGAGTTAGGAGAAGCTCTGTGTATACAACAGTTGGATATCGTGAATGGACTTGCCTaGAATGTGTTCAGTTCACAC +
Preference number: 2 (lower is better)
Translates to: GLSSSELGEALCIQQLDIVNGLA*NVFSSH
Trigger: GTGTGAACTGAACACATTGCAGGCAAGTCCATTCAC...GATATCCAACTGTTGTATACACAGAGCTTCTCCTAACTCCGATGAAGACAAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467067.1
3UTR-3UTR CCA 90 bp ATACTGAATAGGAACCAGCAACACAAGGCCAGCTTGTGTTGTATGTTTATTAATGATGAGCTACTTCAGTaGGTGGGACCAAGCAGGAAC +
Preference number: 2 (lower is better)
Translates to: ILNRNQQHKASLCCMFINDELLQ*VGPSRN
Trigger: GTTCCTGCTTGGTCCCACCCACTGAAGTAGCTCATC...ATTAATAAACATACAACACAAGCTGGCCTTGTGTTGCTGGTTCCTATTCAGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377482.10
3UTR-3UTR TCA 90 bp TTCATCGGAGTTAGGAGAAGCTCTGTGTATACAACAGTTGGATATCCTTATGGCCACATCATAATATTGTaGGTGAATGGACTTGCCTGC +
Preference number: 2 (lower is better)
Translates to: FIGVRRSSVYTTVGYPYGHIIIL*VNGLAC
Trigger: GCAGGCAAGTCCATTCACTCACAATATTATGATGTG...GCCATAAGGATATCCAACTGTTGTATACACAGAGCTTCTCCTAACTCCGATGAA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467067.1
3UTR-3UTR CCA 90 bp ATACTGAATAGGAACCAGCAACACAAGGCCAGCTTGTGTTGTATGTTTATTAATAGCTACTTCAGTGGGTaGGACCAAGCAGGAACTGTA +
Preference number: 2 (lower is better)
Translates to: ILNRNQQHKASLCCMFINSYFSG*DQAGTV
Trigger: TACAGTTCCTGCTTGGTCCCACCCACTGAAGTAGCT...ATTAATAAACATACAACACAAGCTGGCCTTGTGTTGCTGGTTCCTATTCAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377482.10
3UTR-3UTR CCA 90 bp ATTCACTGTGAGTTTCTTAAAACCACATACAACTTGATCCTCTTCATGTGGTCCTCATCGGAGCAGATTTaGAAGCATGCCCAAGTGGTA +
Preference number: 2 (lower is better)
Translates to: IHCEFLKTTYNLILFMWSSSEQI*KHAQVV
Trigger: TACCACTTGGGCATGCTTCCAAATCTGCTCCGATGA...GGACCACATGAAGAGGATCAAGTTGTATGTGGTTTTAAGAAACTCACAGTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487559.1
3UTR-3UTR TCA 90 bp GTGAATGGACTTGCCTGCAATGTGTTCAGTTCACACACAGCTCTTGACAAAGATGCATCAGAGCTGGAATaGGAACTAATTCTTGATTTT +
Preference number: 2 (lower is better)
Translates to: VNGLACNVFSSHTALDKDASELE*ELILDF
Trigger: AAAATCAAGAATTAGTTCTCATTCCAGCTCTGATGC...ATCTTTGTCAAGAGCTGTGTGTGAACTGAACACATTGCAGGCAAGTCCATTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467067.1
3UTR-3UTR CCA 90 bp CTCTGGAATTCAGACATACTGAGCTATGGGTCAGAAGTGTTTTACTTAAAAAGCATACCCTGCCCTCCATaGAAAAGATTGCCTGCAAAA +
Preference number: 2 (lower is better)
Translates to: LWNSDILSYGSEVFYLKSIPCPP*KRLPAK
Trigger: TTTTGCAGGCAATCTTTTCCATGGAGGGCAGGGTAT...GCTTTTTAAGTAAAACACTTCTGACCCATAGCTCAGTATGTCTGAATTCCAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377482.10
3UTR-3UTR TCA 90 bp AAAACTGACATCCTAACACTGGCACCTAGAATACTTTTCCATCTGAGTCTAACGTCTAAACCTTCCACATaGAGACAGAGAGTTCAACTA +
Preference number: 2 (lower is better)
Translates to: KTDILTLAPRILFHLSLTSKPST*RQRVQL
Trigger: TAGTTGAACTCTCTGTCTTCATGTGGAAGGTTTAGA...CGTTAGACTCAGATGGAAAAGTATTCTAGGTGCCAGTGTTAGGATGTCAGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377482.10
3UTR-3UTR TCA 90 bp AAAACTGACATCCTAACACTGGCACCTAGAATACTTTTCCATCTGAGTCTAACGATCAAACTGGAAAATTaGGAACCATTTGCTCCTATG +
Preference number: 2 (lower is better)
Translates to: KTDILTLAPRILFHLSLTIKLEN*EPFAPM
Trigger: CATAGGAGCAAATGGTTCTCAATTTTCCAGTTTGAT...CGTTAGACTCAGATGGAAAAGTATTCTAGGTGCCAGTGTTAGGATGTCAGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377482.10
3UTR-3UTR CCA 90 bp ATACTGAATAGGAACCAGCAACACAAGGCCAGCTTGTGTTGTATGTTTATTAATACGATAGTAACTAATTaGTTAACCTGCAGCTATGGT +
Preference number: 2 (lower is better)
Translates to: ILNRNQQHKASLCCMFINTIVTN*LTCSYG
Trigger: ACCATAGCTGCAGGTTAACCAATTAGTTACTATCGT...ATTAATAAACATACAACACAAGCTGGCCTTGTGTTGCTGGTTCCTATTCAGTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377482.10
3UTR TCA 72 bp CGTACCCCACTGCCTCTAATACGGCCCGCACTACGATaGGCTACTTCAGTGGGTGGGACCAAGCAGGAACTG +
Preference number: 3 (lower is better)
Translates to: RTPLPLIRPALR*ATSVGGTKQEL
Trigger: CAGTTCCTGCTTGGTCCCACCCACTGAAGTAGCTCATCGTAGTGCGGGCCGTATTAGAGGCAGTGGGGTACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377482.10
3UTR CCA 72 bp GTCATCCAGAGAGAGGGCTTCAGAGATTGGCAACGGTaGAAGAGGCCTAGAACCCCGTTCACAAAGAGGGGC +
Preference number: 3 (lower is better)
Translates to: VIQREGFRDWQR*KRPRTPFTKRG
Trigger: GCCCCTCTTTGTGAACGGGGTTCTAGGCCTCTTCCACCGTTGCCAATCTCTGAAGCCCTCTCTCTGGATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467067.1
ENST00000469499.5
ENST00000487559.1
3UTR TCA 72 bp AAGGCTTTTGGGACTCGGTGTGCGCGAGTTACTCGGTaGCAAAGGTTCTCTTGGCGGTACTTTGGGAGGCCT +
Preference number: 3 (lower is better)
Translates to: KAFGTRCARVTR*QRFSWRYFGRP
Trigger: AGGCCTCCCAAAGTACCGCCAAGAGAACCTTTGTCACCGAGTAACTCGCGCACACCGAGTCCCAAAAGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467067.1
3UTR-3UTR CAA 90 bp AGAGATTGGCAACGGTGGAAGAGGCCTAGAACCCCGTTCACAAAGAGGGGCACATATCTTCTGAATCTGTaGCCACTAGGGGTCAGGCTG +
Preference number: 3 (lower is better)
Translates to: RDWQRWKRPRTPFTKRGTYLLNL*PLGVRL
Trigger: CAGCCTGACCCCTAGTGGCAACAGATTCAGAAGATA...TGTGCCCCTCTTTGTGAACGGGGTTCTAGGCCTCTTCCACCGTTGCCAATCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000467067.1
3UTR GCA 72 bp GCTTCCACAGCTTTCTTCCTGAGTGAAACACTTGACTaGTGTCACCCCGAGAACACCCATGCAACCACCACA +
Preference number: 3 (lower is better)
Translates to: ASTAFFLSETLD*CHPENTHATTT
Trigger: TGTGGTGGTTGCATGGGTGTTCTCGGGGTGACAGCAGTCAAGTGTTTCACTCAGGAAGAAAGCTGTGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467067.1
3UTR CCA 72 bp CACGTGAGACACCTTGGAGGACAAAGCCACATTGTGTaGAGGAAAACACACCACCATTCAGGCCCATCGTCA +
Preference number: 3 (lower is better)
Translates to: HVRHLGGQSHIV*RKTHHHSGPSS
Trigger: TGACGATGGGCCTGAATGGTGGTGTGTTTTCCTCCACACAATGTGGCTTTGTCCTCCAAGGTGTCTCACGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474874.5
3UTR-3UTR CAA 90 bp CAGTGGCCATTCATCGGAGCAGATTTGGAAGCATGCCCTGGAATGAACGAGAGAGGGGTCAGGCTGTTGTaGGAAATAGTTCAGGTTTCC +
Preference number: 3 (lower is better)
Translates to: QWPFIGADLEACPGMNERGVRLL*EIVQVS
Trigger: GGAAACCTGAACTATTTCCAACAACAGCCTGACCCC...TCTCTCGTTCATTCCAGGGCATGCTTCCAAATCTGCTCCGATGAATGGCCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467067.1
3UTR-3UTR CAA 90 bp CAGTGGCCATTCATCGGAGCAGATTTGGAAGCATGCCCTGGAATGAACGAGAGACTAGGGGTCAGGCTGTaGTTGGAAATAGTTCAGGTT +
Preference number: 3 (lower is better)
Translates to: QWPFIGADLEACPGMNERLGVRL*LEIVQV
Trigger: AACCTGAACTATTTCCAACAACAGCCTGACCCCTAG...TCTCTCGTTCATTCCAGGGCATGCTTCCAAATCTGCTCCGATGAATGGCCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467067.1
3UTR-3UTR CAA 90 bp AAGACGGAAGGCTTTTGGGACTCGGTGTGCGCGAGTTACTCGGTGACAAAGGTTCTGTGTATACAACAGTaGGATATCCTTATGGCTGGC +
Preference number: 3 (lower is better)
Translates to: KTEGFWDSVCASYSVTKVLCIQQ*DILMAG
Trigger: GCCAGCCATAAGGATATCCAACTGTTGTATACACAG...AACCTTTGTCACCGAGTAACTCGCGCACACCGAGTCCCAAAAGCCTTCCGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467067.1
3UTR TCA 72 bp CTGCAGAAACAGCTGGGGTATCAAAATATGCATAGTTaGTTTGTCCACACCCACGGAAGCTTCGCCTGCCAG +
Preference number: 3 (lower is better)
Translates to: LQKQLGYQNMHS*FVHTHGSFACQ
Trigger: CTGGCAGGCGAAGCTTCCGTGGGTGTGGACAAATCAACTATGCATATTTTGATACCCCAGCTGTTTCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467067.1
ENST00000469499.5
3UTR GCA 72 bp CTTACTGGCAGATCCTTCGCTGTTCTGTCTTTGCAGTaGTTTGCTGCTGACATACTTGGGATCAGGGGCAAA +
Preference number: 3 (lower is better)
Translates to: LTGRSFAVLSLQ*FAADILGIRGK
Trigger: TTTGCCCCTGATCCCAAGTATGTCAGCAGCAAAGCACTGCAAAGACAGAACAGCGAAGGATCTGCCAGTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467067.1
3UTR-3UTR CAA 90 bp AACACCCATGCAACCACCACAGGTGTAATTAGAGAGCAGAAGATTCTTAACGCATCTCCTCTATCTCCCTaGGACATGTGCACAGCGCAC +
Preference number: 3 (lower is better)
Translates to: NTHATTTGVIREQKILNASPLSP*DMCTAH
Trigger: GTGCGCTGTGCACATGTCCAAGGGAGATAGAGGAGA...TGCGTTAAGAATCTTCTGCTCTCTAATTACACCTGTGGTGGTTGCATGGGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467067.1
3UTR GCA 72 bp AAGAACAAACTATCTCCTCTATCTCCCTTGGACATGTaGACAGCGCACACCCACACATCACAGGCAAGTTTT +
Preference number: 3 (lower is better)
Translates to: KNKLSPLSPLDM*TAHTHTSQASF
Trigger: AAAACTTGCCTGTGATGTGTGGGTGTGCGCTGTGCACATGTCCAAGGGAGATAGAGGAGATAGTTTGTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467067.1
3UTR GCA 72 bp GAGATCTGCTGCAGAAACAGCTGGGGTATCAAAATATaGATAGTTGATTTGTCCACACCCACGGAAGCTTCG +
Preference number: 3 (lower is better)
Translates to: EICCRNSWGIKI*IVDLSTPTEAS
Trigger: CGAAGCTTCCGTGGGTGTGGACAAATCAACTATGCATATTTTGATACCCCAGCTGTTTCTGCAGCAGATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467067.1
ENST00000469499.5
3UTR CCA 72 bp AGCTCTGTGTATACAACAGTTGGATATCCTTATGGCTaGCTTGTTAAAGGAGCCAGCTGGTCCCGAATGAGA +
Preference number: 3 (lower is better)
Translates to: SSVYTTVGYPYG*LVKGASWSRMR
Trigger: TCTCATTCGGGACCAGCTGGCTCCTTTAACAAGCCAGCCATAAGGATATCCAACTGTTGTATACACAGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467067.1
ENST00000469499.5
3UTR-3UTR CAA 90 bp AACACCCATGCAACCACCACAGGTGTAATTAGAGAGCAGAAGATTCTTAACGCACATACTGTACCAGCCTaGCCATTTAAGACATGCGAC +
Preference number: 3 (lower is better)
Translates to: NTHATTTGVIREQKILNAHTVPA*PFKTCD
Trigger: GTCGCATGTCTTAAATGGCAAGGCTGGTACAGTATG...TGCGTTAAGAATCTTCTGCTCTCTAATTACACCTGTGGTGGTTGCATGGGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467067.1
3UTR TCA 72 bp ATCGGAACACCAACTATGTGTCTCACTGCATCTAAGTaGAGCAGCCACAGCTGTGAGAGTTTTCAAAGCAGA +
Preference number: 3 (lower is better)
Translates to: IGTPTMCLTASK*SSHSCESFQSR
Trigger: TCTGCTTTGAAAACTCTCACAGCTGTGGCTGCTTCACTTAGATGCAGTGAGACACATAGTTGGTGTTCCGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377482.10
3UTR TCA 72 bp AAGACATGCGACCATACTAGGCACGTAGGGTACCAATaGGATAAGACAAAGTCCTTATTGCTGGCACATCAT +
Preference number: 3 (lower is better)
Translates to: KTCDHTRHVGYQ*DKTKSLLLAHH
Trigger: ATGATGTGCCAGCAATAAGGACTTTGTCTTATCTCATTGGTACCCTACGTGCCTAGTATGGTCGCATGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467067.1
3UTR CCA 72 bp ATTTTTAACCTAAGCAGGTACACCCATGGTAAAGAATaGATACCCTGCCCTCCATGGAAAAGATTGCCTGCA +
Preference number: 3 (lower is better)
Translates to: IFNLSRYTHGKE*IPCPPWKRLPA
Trigger: TGCAGGCAATCTTTTCCATGGAGGGCAGGGTATCCATTCTTTACCATGGGTGTACCTGCTTAGGTTAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377482.10
3UTR-3UTR CAA 90 bp GATTTGTCCACACCCACGGAAGCTTCGCCTGCCAGGAACATCATATTTGAAATCGTCGAGTACAATAGCTaGAGAAAAACACAGTTATCT +
Preference number: 3 (lower is better)
Translates to: DLSTPTEASPARNIIFEIVEYNS*RKTQLS
Trigger: AGATAACTGTGTTTTTCTCAAGCTATTGTACTCGAC...GATTTCAAATATGATGTTCCTGGCAGGCGAAGCTTCCGTGGGTGTGGACAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467067.1
3UTR TCA 72 bp ATCGTTTTATTTTTCAAGATGTGTGACAGGTACAGGTaGCAATATGGTTGCCAAGTAACCTGCTCTCCCTCC +
Preference number: 3 (lower is better)
Translates to: IVLFFKMCDRYR*QYGCQVTCSPS
Trigger: GGAGGGAGAGCAGGTTACTTGGCAACCATATTGTCACCTGTACCTGTCACACATCTTGAAAAATAAAACGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377482.10
3UTR TCA 72 bp GTCTTCATCACTATAGGTGCTCGAAGTAACTTCTGCTaGCCATCTTCTATAATCTGGCTTTACTGGTCTAGG +
Preference number: 3 (lower is better)
Translates to: VFITIGARSNFC*PSSIIWLYWSR
Trigger: CCTAGACCAGTAAAGCCAGATTATAGAAGATGGTCAGCAGAAGTTACTTCGAGCACCTATAGTGATGAAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467067.1
3UTR CCA 72 bp TCCTTATTGCTGGCACATCATAATATTGTGAGTGAATaGACTTGCCTGCAATGTGTTCAGTTCACACACAGC +
Preference number: 3 (lower is better)
Translates to: SLLLAHHNIVSE*TCLQCVQFTHS
Trigger: GCTGTGTGTGAACTGAACACATTGCAGGCAAGTCCATTCACTCACAATATTATGATGTGCCAGCAATAAGGA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467067.1
3UTR CCA 72 bp GTCAGACACATAGCTGAGATCTGCTGCAGAAACAGCTaGGGTATCAAAATATGCATAGTTGATTTGTCCACA +
Preference number: 3 (lower is better)
Translates to: VRHIAEICCRNS*GIKICIVDLST
Trigger: TGTGGACAAATCAACTATGCATATTTTGATACCCCAGCTGTTTCTGCAGCAGATCTCAGCTATGTGTCTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467067.1
ENST00000469499.5
3UTR TCA 72 bp CCATTCACTGTGAGTTTCTTAAAACCACATACAACTTaGTCCTCTTCATGTGGTCCCAAGTTTTCACTTGGG +
Preference number: 3 (lower is better)
Translates to: PFTVSFLKPHTT*SSSCGPKFSLG
Trigger: CCCAAGTGAAAACTTGGGACCACATGAAGAGGATCAAGTTGTATGTGGTTTTAAGAAACTCACAGTGAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467067.1
ENST00000487559.1
3UTR CCA 72 bp GTGGCCATTCATCGGAGCAGATTTGGAAGCATGCCCTaGAATGAACGAGAGATATTAATAAAAGATCAACAA +
Preference number: 3 (lower is better)
Translates to: VAIHRSRFGSMP*NEREILIKDQQ
Trigger: TTGTTGATCTTTTATTAATATCTCTCGTTCATTCCAGGGCATGCTTCCAAATCTGCTCCGATGAATGGCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467067.1
3UTR TCA 72 bp AGACAAAGTCCTTATTGCTGGCACATCATAATATTGTaGGTGAATGGACTTGCCTGCAATGTGTTCAGTTCA +
Preference number: 3 (lower is better)
Translates to: RQSPYCWHIIIL*VNGLACNVFSS
Trigger: TGAACTGAACACATTGCAGGCAAGTCCATTCACTCACAATATTATGATGTGCCAGCAATAAGGACTTTGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467067.1
3UTR-3UTR CAA 90 bp ATACTGAATAGGAACCAGCAACACAAGGCCAGCTTGTGTTGTATGTTTATTAATAAAATTGAGAACCATTaGCTCCTATGTAACCTCTGC +
Preference number: 3 (lower is better)
Translates to: ILNRNQQHKASLCCMFINKIENH*LLCNLC
Trigger: GCAGAGGTTACATAGGAGCAAATGGTTCTCAATTTT...ATTAATAAACATACAACACAAGCTGGCCTTGTGTTGCTGGTTCCTATTCAGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377482.10
3UTR TCA 72 bp AGGTTTCATGAAGTAAAGTATGCATCAGAGCTGGAATaGGAACTAATTCTTGATTTTAGAAGATCCCACGTC +
Preference number: 3 (lower is better)
Translates to: RFHEVKYASELE*ELILDFRRSHV
Trigger: GACGTGGGATCTTCTAAAATCAAGAATTAGTTCTCATTCCAGCTCTGATGCATACTTTACTTCATGAAACCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467067.1
3UTR TCA 72 bp GGCAAGTTTTGTGACGTGTGTAAAATTCGCGGAAGATaGATAGCATATAATTTACATGAATACCATACTGTA +
Preference number: 3 (lower is better)
Translates to: GKFCDVCKIRGR*IAYNLHEYHTV
Trigger: TACAGTATGGTATTCATGTAAATTATATGCTATTCATCTTCCGCGAATTTTACACACGTCACAAAACTTGCC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR TCA 90 bp ATTGGCAACGGTGGAAGAGGCCTAGAACCCCGTTCACAAAGAGGGGCACAGGGGGGTATTAGGCGCTCCTaGGCAGAAGAGTTCAGACTG +
Preference number: 4 (lower is better)
Translates to: IGNGGRGLEPRSQRGAQGGIRRS*AEEFRL
Trigger: CAGTCTGAACTCTTCTGCTCAGGAGCGCCTAATACC...CCCCTGTGCCCCTCTTTGTGAACGGGGTTCTAGGCCTCTTCCACCGTTGCCAAT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000467067.1
ENST00000487559.1
CDS-3UTR CCA 90 bp AGGAGCCAGCTGGTCCCGAATGAGACCTTCTTAATCTTCGGTGGGTCTGAGGTGAGAGATTGGCAACGGTaGAAGAGGCCTAGAACCCCG +
Preference number: 4 (lower is better)
Translates to: RSQLVPNETFLIFGGSEVRDWQR*KRPRTP
Trigger: CGGGGTTCTAGGCCTCTTCCACCGTTGCCAATCTCT...CACCTCAGACCCACCGAAGATTAAGAAGGTCTCATTCGGGACCAGCTGGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467067.1
ENST00000469499.5
CDS-3UTR CCA 90 bp CATCTGAGTCTAACGTACCCCACTGCCTCTAATACGGCCCGCACTACGATGAGCTCGGTGGGTCTGAGGTaGAGGAGGATTTGGATCTGG +
Preference number: 4 (lower is better)
Translates to: HLSLTYPTASNTARTTMSSVGLR*RRIWIW
Trigger: CCAGATCCAAATCCTCCTCCACCTCAGACCCACCGA...GCTCATCGTAGTGCGGGCCGTATTAGAGGCAGTGGGGTACGTTAGACTCAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR CCA 90 bp GAGATTGGCAACGGTGGAAGAGGCCTAGAACCCCGTTCACAAAGAGGGGCACAGGTTAAAGGAGCCAGCTaGTCCCGAATGAGACCTTCT +
Preference number: 4 (lower is better)
Translates to: EIGNGGRGLEPRSQRGAQVKGAS*SRMRPS
Trigger: AGAAGGTCTCATTCGGGACCAGCTGGCTCCTTTAAC...CTGTGCCCCTCTTTGTGAACGGGGTTCTAGGCCTCTTCCACCGTTGCCAATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467067.1
ENST00000469499.5
CDS-3UTR TCA 90 bp ATTGGCAACGGTGGAAGAGGCCTAGAACCCCGTTCACAAAGAGGGGCACAGGGGAAACCACATACAACTTaGTCCTCTTCATGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: IGNGGRGLEPRSQRGAQGKPHTT*SSSCGP
Trigger: GGGACCACATGAAGAGGATCAAGTTGTATGTGGTTT...CCCCTGTGCCCCTCTTTGTGAACGGGGTTCTAGGCCTCTTCCACCGTTGCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000467067.1
ENST00000469499.5
ENST00000487559.1
CDS-3UTR TCA 90 bp AAGACGGAAGGCTTTTGGGACTCGGTGTGCGCGAGTTACTCGGTGACAAAGGTTCCAGCTGGTCCCGAATaGGACCTTCTTAATCTTCGG +
Preference number: 4 (lower is better)
Translates to: KTEGFWDSVCASYSVTKVPAGPE*DLLNLR
Trigger: CCGAAGATTAAGAAGGTCTCATTCGGGACCAGCTGG...AACCTTTGTCACCGAGTAACTCGCGCACACCGAGTCCCAAAAGCCTTCCGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR CCA 90 bp CTATCTCCCTTGGACATGTGCACAGCGCACACCCACACATCACAGGCAAGTTTTTCGGTGGGTCTGAGGTaGAGGAGGATTTGGATCTGG +
Preference number: 4 (lower is better)
Translates to: LSPLDMCTAHTHTSQASFSVGLR*RRIWIW
Trigger: CCAGATCCAAATCCTCCTCCACCTCAGACCCACCGA...AAAACTTGCCTGTGATGTGTGGGTGTGCGCTGTGCACATGTCCAAGGGAGATAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR CCA 90 bp CATCTGAGTCTAACGTACCCCACTGCCTCTAATACGGCCCGCACTACGATGAGCGTTAAAGGAGCCAGCTaGTCCCGAATGAGACCTTCT +
Preference number: 4 (lower is better)
Translates to: HLSLTYPTASNTARTTMSVKGAS*SRMRPS
Trigger: AGAAGGTCTCATTCGGGACCAGCTGGCTCCTTTAAC...GCTCATCGTAGTGCGGGCCGTATTAGAGGCAGTGGGGTACGTTAGACTCAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377482.10
3UTR CAA 72 bp TCGGTGTGCGCGAGTTACTCGGTGACAAAGGTTCTCTaGGCGGTACTTTGGGAGGCCTGTCTTCATCACTAT +
Preference number: 4 (lower is better)
Translates to: SVCASYSVTKVL*AVLWEACLHHY
Trigger: ATAGTGATGAAGACAGGCCTCCCAAAGTACCGCCAAGAGAACCTTTGTCACCGAGTAACTCGCGCACACCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR TCA 90 bp GAGATTGGCAACGGTGGAAGAGGCCTAGAACCCCGTTCACAAAGAGGGGCACAGTTTTTAATGGGACTCTaGTCTCCTGAGCAGCAACTC +
Preference number: 4 (lower is better)
Translates to: EIGNGGRGLEPRSQRGAQFLMGL*SPEQQL
Trigger: GAGTTGCTGCTCAGGAGATCAGAGTCCCATTAAAAA...CTGTGCCCCTCTTTGTGAACGGGGTTCTAGGCCTCTTCCACCGTTGCCAATCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000467067.1
ENST00000469499.5
ENST00000487559.1
CDS-3UTR TCA 90 bp CATCTGAGTCTAACGTACCCCACTGCCTCTAATACGGCCCGCACTACGATGAGCGGCAAGCTGGACTTTTaGGATGGACCATTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: HLSLTYPTASNTARTTMSGKLDF*DGPFSA
Trigger: TGCAGAAAATGGTCCATCTCAAAAGTCCAGCTTGCC...GCTCATCGTAGTGCGGGCCGTATTAGAGGCAGTGGGGTACGTTAGACTCAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR TCA 90 bp AGAGATTGGCAACGGTGGAAGAGGCCTAGAACCCCGTTCACAAAGAGGGGCACAGGCAAGCTGGACTTTTaGGATGGACCATTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: RDWQRWKRPRTPFTKRGTGKLDF*DGPFSA
Trigger: TGCAGAAAATGGTCCATCTCAAAAGTCCAGCTTGCC...TGTGCCCCTCTTTGTGAACGGGGTTCTAGGCCTCTTCCACCGTTGCCAATCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000467067.1
ENST00000469499.5
ENST00000487559.1
CDS-3UTR TCA 90 bp GAGATTGGCAACGGTGGAAGAGGCCTAGAACCCCGTTCACAAAGAGGGGCACAGAAACCACATACAACTTaGTCCTCTTCATGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: EIGNGGRGLEPRSQRGAQKPHTT*SSSCGP
Trigger: GGGACCACATGAAGAGGATCAAGTTGTATGTGGTTT...CTGTGCCCCTCTTTGTGAACGGGGTTCTAGGCCTCTTCCACCGTTGCCAATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467067.1
ENST00000469499.5
ENST00000487559.1
CDS-3UTR TCA 90 bp CCTAGAATACTTTTCCATCTGAGTCTAACGTACCCCACTGCCTCTAATACGGCCGCGCGAGTTACTCGGTaGCAAAGGTTCTCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: PRILFHLSLTYPTASNTAARVTR*QRFSWR
Trigger: CCGCCAAGAGAACCTTTGTCACCGAGTAACTCGCGC...GGCCGTATTAGAGGCAGTGGGGTACGTTAGACTCAGATGGAAAAGTATTCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR TCA 90 bp GAGGACAAAGCCACATTGTGTGGAGGAAAACACACCACCATTCAGGCCCATCGTCCAGCTTCCATCACGTaGGACACCTTGGAGGACAAA +
Preference number: 4 (lower is better)
Translates to: EDKATLCGGKHTTIQAHRPASIT*DTLEDK
Trigger: TTTGTCCTCCAAGGTGTCTCACGTGATGGAAGCTGG...ACGATGGGCCTGAATGGTGGTGTGTTTTCCTCCACACAATGTGGCTTTGTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474874.5
CDS-3UTR GCA 90 bp AGGAGCCAGCTGGTCCCGAATGAGACCTTCTTAATCTTCGGTGGGTCTGAGGTGATAGCTGAGATCTGCTaGAGAAACAGCTGGGGTATC +
Preference number: 4 (lower is better)
Translates to: RSQLVPNETFLIFGGSEVIAEIC*RNSWGI
Trigger: GATACCCCAGCTGTTTCTGCAGCAGATCTCAGCTAT...CACCTCAGACCCACCGAAGATTAAGAAGGTCTCATTCGGGACCAGCTGGCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467067.1
ENST00000469499.5
CDS-3UTR GCA 90 bp CTATCTCCCTTGGACATGTGCACAGCGCACACCCACACATCACAGGCAAGTTTTCCCCGAGAACACCCATaGAACCACCACAGGTGTAAT +
Preference number: 4 (lower is better)
Translates to: LSPLDMCTAHTHTSQASFPREHP*NHHRCN
Trigger: ATTACACCTGTGGTGGTTGCATGGGTGTTCTCGGGG...AAAACTTGCCTGTGATGTGTGGGTGTGCGCTGTGCACATGTCCAAGGGAGATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR CCA 90 bp ATTGGCAACGGTGGAAGAGGCCTAGAACCCCGTTCACAAAGAGGGGCACAGGGGTTGATCCTCTTCATGTaGTCCCAAGTTTTCACTTGG +
Preference number: 4 (lower is better)
Translates to: IGNGGRGLEPRSQRGAQGLILFM*SQVFTW
Trigger: CCAAGTGAAAACTTGGGACCACATGAAGAGGATCAA...CCCCTGTGCCCCTCTTTGTGAACGGGGTTCTAGGCCTCTTCCACCGTTGCCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000467067.1
ENST00000469499.5
ENST00000487559.1
CDS-3UTR CCA 90 bp TGCAAAGCAGTGGCCATTCATCGGAGCAGATTTGGAAGCATGCCCAAGTGGTATAGAGATTGGCAACGGTaGAAGAGGCCTAGAACCCCG +
Preference number: 4 (lower is better)
Translates to: CKAVAIHRSRFGSMPKWYRDWQR*KRPRTP
Trigger: CGGGGTTCTAGGCCTCTTCCACCGTTGCCAATCTCT...ATACCACTTGGGCATGCTTCCAAATCTGCTCCGATGAATGGCCACTGCTTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487559.1
CDS-3UTR CCA 90 bp AGGAGCCAGCTGGTCCCGAATGAGACCTTCTTAATCTTCGGTGGGTCTGAGGTGTGCAAGGAACCTTACTaGCAGATCCTTCGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: RSQLVPNETFLIFGGSEVCKEPY*QILRCS
Trigger: AGAACAGCGAAGGATCTGCCAGTAAGGTTCCTTGCA...CACCTCAGACCCACCGAAGATTAAGAAGGTCTCATTCGGGACCAGCTGGCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR TCA 90 bp TGGGACACCTCCATTTTGGTCAGACACATAGCTGAGATCTGCTGCAGAAACAGCCCAGCTGGTCCCGAATaGGACCTTCTTAATCTTCGG +
Preference number: 4 (lower is better)
Translates to: WDTSILVRHIAEICCRNSPAGPE*DLLNLR
Trigger: CCGAAGATTAAGAAGGTCTCATTCGGGACCAGCTGG...GCTGTTTCTGCAGCAGATCTCAGCTATGTGTCTGACCAAAATGGAGGTGTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467067.1
ENST00000469499.5
CDS-3UTR TCA 90 bp TCGGAGTTAGGAGAAGCTCTGTGTATACAACAGTTGGATATCCTTATGGCTGGCGCGCGAGTTACTCGGTaGCAAAGGTTCTCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: SELGEALCIQQLDILMAGARVTR*QRFSWR
Trigger: CCGCCAAGAGAACCTTTGTCACCGAGTAACTCGCGC...GCCAGCCATAAGGATATCCAACTGTTGTATACACAGAGCTTCTCCTAACTCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR TCA 90 bp TCAGGTTTGTCTTCATCGGAGTTAGGAGAAGCTCTGTGTATACAACAGTTGGATCTCTCTCCACCTGTGTaGGGGAGAGAGCACCCCAGC +
Preference number: 4 (lower is better)
Translates to: SGLSSSELGEALCIQQLDLSPPV*GREHPS
Trigger: GCTGGGGTGCTCTCTCCCTCACACAGGTGGAGAGAG...ATCCAACTGTTGTATACACAGAGCTTCTCCTAACTCCGATGAAGACAAACCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR GCA 90 bp AAAGCAGTGGCCATTCATCGGAGCAGATTTGGAAGCATGCCCTGGAATGAACGATTTTGGGACTCGGTGTaGGCGAGTTACTCGGTGACA +
Preference number: 4 (lower is better)
Translates to: KAVAIHRSRFGSMPWNERFWDSV*ASYSVT
Trigger: TGTCACCGAGTAACTCGCGCACACCGAGTCCCAAAA...TCGTTCATTCCAGGGCATGCTTCCAAATCTGCTCCGATGAATGGCCACTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR GCA 90 bp CTATCTCCCTTGGACATGTGCACAGCGCACACCCACACATCACAGGCAAGTTTTCACCCCAGCTACCTATaGTTCCACAGCTTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: LSPLDMCTAHTHTSQASFHPSYL*FHSFLP
Trigger: AGGAAGAAAGCTGTGGAAGCATAGGTAGCTGGGGTG...AAAACTTGCCTGTGATGTGTGGGTGTGCGCTGTGCACATGTCCAAGGGAGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR CCA 90 bp CATCTGAGTCTAACGTACCCCACTGCCTCTAATACGGCCCGCACTACGATGAGCTCCTCATATTCCCCATaGCTCGGCCATTATGTAGAA +
Preference number: 4 (lower is better)
Translates to: HLSLTYPTASNTARTTMSSSYSP*LGHYVE
Trigger: TTCTACATAATGGCCGAGCCATGGGGAATATGAGGA...GCTCATCGTAGTGCGGGCCGTATTAGAGGCAGTGGGGTACGTTAGACTCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR CCA 90 bp AGAGATTGGCAACGGTGGAAGAGGCCTAGAACCCCGTTCACAAAGAGGGGCACATTTTCTGCAAAGCAGTaGCCATTCATCGGAGCAGAT +
Preference number: 4 (lower is better)
Translates to: RDWQRWKRPRTPFTKRGTFSAKQ*PFIGAD
Trigger: ATCTGCTCCGATGAATGGCCACTGCTTTGCAGAAAA...TGTGCCCCTCTTTGTGAACGGGGTTCTAGGCCTCTTCCACCGTTGCCAATCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000467067.1
ENST00000469499.5
ENST00000487559.1
CDS-3UTR CCA 90 bp GCTGTTCTGTCTTTGCAGTGCTTTGCTGCTGACATACTTGGGATCAGGGGCAAAGAGGTATGGGAACTCTaGGGGGAACCTCAGGTTTGT +
Preference number: 4 (lower is better)
Translates to: AVLSLQCFAADILGIRGKEVWEL*GEPQVC
Trigger: ACAAACCTGAGGTTCCCCCCAGAGTTCCCATACCTC...TTTGCCCCTGATCCCAAGTATGTCAGCAGCAAAGCACTGCAAAGACAGAACAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR CCA 90 bp CATCTGAGTCTAACGTACCCCACTGCCTCTAATACGGCCCGCACTACGATGAGCATACCCTGCCCTCCATaGAAAAGATTGCCTGCAAAA +
Preference number: 4 (lower is better)
Translates to: HLSLTYPTASNTARTTMSIPCPP*KRLPAK
Trigger: TTTTGCAGGCAATCTTTTCCATGGAGGGCAGGGTAT...GCTCATCGTAGTGCGGGCCGTATTAGAGGCAGTGGGGTACGTTAGACTCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR TCA 90 bp TTCTGCAAAGCAGTGGCCATTCATCGGAGCAGATTTGGAAGCATGCCCAAGTGGGGCAAGCTGGACTTTTaGGATGGACCATTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: FCKAVAIHRSRFGSMPKWGKLDF*DGPFSA
Trigger: TGCAGAAAATGGTCCATCTCAAAAGTCCAGCTTGCC...CCACTTGGGCATGCTTCCAAATCTGCTCCGATGAATGGCCACTGCTTTGCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000487559.1
CDS-3UTR TCA 90 bp AGAGATTGGCAACGGTGGAAGAGGCCTAGAACCCCGTTCACAAAGAGGGGCACACGAAGTAACTTCTGCTaGCCATCTTCTATAATCTGG +
Preference number: 4 (lower is better)
Translates to: RDWQRWKRPRTPFTKRGTRSNFC*PSSIIW
Trigger: CCAGATTATAGAAGATGGTCAGCAGAAGTTACTTCG...TGTGCCCCTCTTTGTGAACGGGGTTCTAGGCCTCTTCCACCGTTGCCAATCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR TCA 90 bp AAAACTGACATCCTAACACTGGCACCTAGAATACTTTTCCATCTGAGTCTAACGCGGCCCGCACTACGATaGGCTACTTCAGTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: KTDILTLAPRILFHLSLTRPALR*ATSVGG
Trigger: CCCACCCACTGAAGTAGCTCATCGTAGTGCGGGCCG...CGTTAGACTCAGATGGAAAAGTATTCTAGGTGCCAGTGTTAGGATGTCAGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR TCA 90 bp GATGAGCTACTTCAGTGGGTGGGACCAAGCAGGAACTGTAAGGGAAAATTAGTCCTCACTGCATCTAAGTaGAGCAGCCACAGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: DELLQWVGPSRNCKGKLVLTASK*SSHSCE
Trigger: CTCACAGCTGTGGCTGCTTCACTTAGATGCAGTGAG...GACTAATTTTCCCTTACAGTTCCTGCTTGGTCCCACCCACTGAAGTAGCTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR GCA 90 bp TGGGACACCTCCATTTTGGTCAGACACATAGCTGAGATCTGCTGCAGAAACAGCCACATAGCTGAGATCTaGTGCAGAAACAGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: WDTSILVRHIAEICCRNSHIAEI*CRNSWG
Trigger: ACCCCAGCTGTTTCTGCAGCAGATCTCAGCTATGTG...GCTGTTTCTGCAGCAGATCTCAGCTATGTGTCTGACCAAAATGGAGGTGTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467067.1
ENST00000469499.5
CDS-3UTR GCA 90 bp CATTGTGTGGAGGAAAACACACCACCATTCAGGCCCATCGTCATCCTGCTTTCTGGCCCATCGTCATCCTaGTTTCTCCTATACTCAGTC +
Preference number: 4 (lower is better)
Translates to: HCVEENTPPFRPIVILLSGPSSS*FLLYSV
Trigger: GACTGAGTATAGGAGAAAGCAGGATGACGATGGGCC...AGAAAGCAGGATGACGATGGGCCTGAATGGTGGTGTGTTTTCCTCCACACAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474874.5
CDS-3UTR CCA 90 bp CATCTGAGTCTAACGTACCCCACTGCCTCTAATACGGCCCGCACTACGATGAGCTTGATCCTCTTCATGTaGTCCCAAGTTTTCACTTGG +
Preference number: 4 (lower is better)
Translates to: HLSLTYPTASNTARTTMSLILFM*SQVFTW
Trigger: CCAAGTGAAAACTTGGGACCACATGAAGAGGATCAA...GCTCATCGTAGTGCGGGCCGTATTAGAGGCAGTGGGGTACGTTAGACTCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR CCA 90 bp AGGAGCCAGCTGGTCCCGAATGAGACCTTCTTAATCTTCGGTGGGTCTGAGGTGTTGATCCTCTTCATGTaGTCCCAAGTTTTCACTTGG +
Preference number: 4 (lower is better)
Translates to: RSQLVPNETFLIFGGSEVLILFM*SQVFTW
Trigger: CCAAGTGAAAACTTGGGACCACATGAAGAGGATCAA...CACCTCAGACCCACCGAAGATTAAGAAGGTCTCATTCGGGACCAGCTGGCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467067.1
ENST00000469499.5
CDS-3UTR CCA 90 bp GATTTGTCCACACCCACGGAAGCTTCGCCTGCCAGGAACATCATATTTGAAATCGTGTCAGTGGAGGGGTaGAAGCACAAACCCCATTCA +
Preference number: 4 (lower is better)
Translates to: DLSTPTEASPARNIIFEIVSVEG*KHKPHS
Trigger: TGAATGGGGTTTGTGCTTCCACCCCTCCACTGACAC...GATTTCAAATATGATGTTCCTGGCAGGCGAAGCTTCCGTGGGTGTGGACAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467067.1
ENST00000469499.5
CDS-3UTR CCA 90 bp CTATCTCCCTTGGACATGTGCACAGCGCACACCCACACATCACAGGCAAGTTTTAGGAGGATTTGGATCTaGGACACCTCCATTTTGGTC +
Preference number: 4 (lower is better)
Translates to: LSPLDMCTAHTHTSQASFRRIWI*DTSILV
Trigger: GACCAAAATGGAGGTGTCCCAGATCCAAATCCTCCT...AAAACTTGCCTGTGATGTGTGGGTGTGCGCTGTGCACATGTCCAAGGGAGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR CCA 90 bp GCTGTTCTGTCTTTGCAGTGCTTTGCTGCTGACATACTTGGGATCAGGGGCAAAGTTAAAGGAGCCAGCTaGTCCCGAATGAGACCTTCT +
Preference number: 4 (lower is better)
Translates to: AVLSLQCFAADILGIRGKVKGAS*SRMRPS
Trigger: AGAAGGTCTCATTCGGGACCAGCTGGCTCCTTTAAC...TTTGCCCCTGATCCCAAGTATGTCAGCAGCAAAGCACTGCAAAGACAGAACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR CCA 90 bp CCTAGAATACTTTTCCATCTGAGTCTAACGTACCCCACTGCCTCTAATACGGCCGATGAGCTACTTCAGTaGGTGGGACCAAGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: PRILFHLSLTYPTASNTADELLQ*VGPSRN
Trigger: GTTCCTGCTTGGTCCCACCCACTGAAGTAGCTCATC...GGCCGTATTAGAGGCAGTGGGGTACGTTAGACTCAGATGGAAAAGTATTCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR CCA 90 bp GATTTGTCCACACCCACGGAAGCTTCGCCTGCCAGGAACATCATATTTGAAATCCTCCTCTATCTCCCTTaGACATGTGCACAGCGCACA +
Preference number: 4 (lower is better)
Translates to: DLSTPTEASPARNIIFEILLYLP*TCAQRT
Trigger: TGTGCGCTGTGCACATGTCCAAGGGAGATAGAGGAG...GATTTCAAATATGATGTTCCTGGCAGGCGAAGCTTCCGTGGGTGTGGACAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467067.1
3UTR CAA 72 bp AGGAACCTTACTGGCAGATCCTTCGCTGTTCTGTCTTaGCAGTGCTTTGCTGCTGACATACTTGGGATCAGG +
Preference number: 4 (lower is better)
Translates to: RNLTGRSFAVLS*QCFAADILGIR
Trigger: CCTGATCCCAAGTATGTCAGCAGCAAAGCACTGCAAAGACAGAACAGCGAAGGATCTGCCAGTAAGGTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR TCA 90 bp GTGGAGGAAAACACACCACCATTCAGGCCCATCGTCATCCTGCTTTCTCCTATAACATCTCCAAACCTGTaGGGCCCAGGCACTTTAAAA +
Preference number: 4 (lower is better)
Translates to: VEENTPPFRPIVILLSPITSPNL*GPGTLK
Trigger: TTTTAAAGTGCCTGGGCCTCACAGGTTTGGAGATGT...TATAGGAGAAAGCAGGATGACGATGGGCCTGAATGGTGGTGTGTTTTCCTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474874.5
CDS-3UTR TCA 90 bp AAGCCACATTGTGTGGAGGAAAACACACCACCATTCAGGCCCATCGTCATCCTGTTTTTAATGGGACTCTaGTCTCCTGAGCAGCAACTC +
Preference number: 4 (lower is better)
Translates to: KPHCVEENTPPFRPIVILFLMGL*SPEQQL
Trigger: GAGTTGCTGCTCAGGAGATCAGAGTCCCATTAAAAA...CAGGATGACGATGGGCCTGAATGGTGGTGTGTTTTCCTCCACACAATGTGGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474874.5
CDS-3UTR GCA 90 bp GCAAGCTGGACTTTTGAGATGGACCATTTTCTGCAAAGCAGTGGCCATTCATCGGCAGATTTGGAAGCATaGCCAAGTGGTATTAGGCGC +
Preference number: 4 (lower is better)
Translates to: ASWTFEMDHFLQSSGHSSADLEA*PSGIRR
Trigger: GCGCCTAATACCACTTGGGCATGCTTCCAAATCTGC...CGATGAATGGCCACTGCTTTGCAGAAAATGGTCCATCTCAAAAGTCCAGCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487559.1
CDS-3UTR GCA 90 bp AAAGCAGTGGCCATTCATCGGAGCAGATTTGGAAGCATGCCCTGGAATGAACGAATAGCTGAGATCTGCTaGAGAAACAGCTGGGGTATC +
Preference number: 4 (lower is better)
Translates to: KAVAIHRSRFGSMPWNERIAEIC*RNSWGI
Trigger: GATACCCCAGCTGTTTCTGCAGCAGATCTCAGCTAT...TCGTTCATTCCAGGGCATGCTTCCAAATCTGCTCCGATGAATGGCCACTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR GCA 90 bp CTATCTCCCTTGGACATGTGCACAGCGCACACCCACACATCACAGGCAAGTTTTATACTGTACCAGCCTTaGCATTTAAGACATGCGACC +
Preference number: 4 (lower is better)
Translates to: LSPLDMCTAHTHTSQASFILYQP*HLRHAT
Trigger: GGTCGCATGTCTTAAATGGCAAGGCTGGTACAGTAT...AAAACTTGCCTGTGATGTGTGGGTGTGCGCTGTGCACATGTCCAAGGGAGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR CCA 90 bp TTTCTGCAAAGCAGTGGCCATTCATCGGAGCAGATTTGGAAGCATGCCCAAGTGTCATCGGAGCAGATTTaGAAGCATGCCCAAGTGGTA +
Preference number: 4 (lower is better)
Translates to: FLQSSGHSSEQIWKHAQVSSEQI*KHAQVV
Trigger: TACCACTTGGGCATGCTTCCAAATCTGCTCCGATGA...CACTTGGGCATGCTTCCAAATCTGCTCCGATGAATGGCCACTGCTTTGCAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487559.1
CDS-3UTR CCA 90 bp AACAGCTGGGGTATCAAAATATGCATAGTTGATTTGTCCACACCCACGGAAGCTGAGGGCTTCAGAGATTaGCAACGGTGGAAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: NSWGIKICIVDLSTPTEAEGFRD*QRWKRP
Trigger: AGGCCTCTTCCACCGTTGCCAATCTCTGAAGCCCTC...AGCTTCCGTGGGTGTGGACAAATCAACTATGCATATTTTGATACCCCAGCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467067.1
ENST00000469499.5
CDS-3UTR CCA 90 bp GAGTTAGGAGAAGCTCTGTGTATACAACAGTTGGATATCCTTATGGCTGGCTTGGAGGGCTTCAGAGATTaGCAACGGTGGAAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: ELGEALCIQQLDILMAGLEGFRD*QRWKRP
Trigger: AGGCCTCTTCCACCGTTGCCAATCTCTGAAGCCCTC...CAAGCCAGCCATAAGGATATCCAACTGTTGTATACACAGAGCTTCTCCTAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467067.1
ENST00000469499.5
CDS-3UTR CCA 90 bp ACCTCCATTTTGGTCAGACACATAGCTGAGATCTGCTGCAGAAACAGCTGGGGTGGATATCCTTATGGCTaGCTTGTTAAAGGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: TSILVRHIAEICCRNSWGGYPYG*LVKGAS
Trigger: GCTGGCTCCTTTAACAAGCCAGCCATAAGGATATCC...ACCCCAGCTGTTTCTGCAGCAGATCTCAGCTATGTGTCTGACCAAAATGGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467067.1
ENST00000469499.5
CDS-3UTR CCA 90 bp CATCTGAGTCTAACGTACCCCACTGCCTCTAATACGGCCCGCACTACGATGAGCTGTGTATACAACAGTTaGATATCCTTATGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: HLSLTYPTASNTARTTMSCVYNS*ISLWLA
Trigger: AGCCAGCCATAAGGATATCCAACTGTTGTATACACA...GCTCATCGTAGTGCGGGCCGTATTAGAGGCAGTGGGGTACGTTAGACTCAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR CCA 90 bp CAGCTTCCATCACGTGAGACACCTTGGAGGACAAAGCCACATTGTGTGGAGGAACAAAGCCACATTGTGTaGAGGAAAACACACCACCAT +
Preference number: 4 (lower is better)
Translates to: QLPSRETPWRTKPHCVEEQSHIV*RKTHHH
Trigger: ATGGTGGTGTGTTTTCCTCCACACAATGTGGCTTTG...TTCCTCCACACAATGTGGCTTTGTCCTCCAAGGTGTCTCACGTGATGGAAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474874.5
CDS-3UTR TCA 90 bp CCATTTTCTGCAAAGCAGTGGCCATTCATCGGAGCAGATTTGGAAGCATGCCCTTTTTTAATGGGACTCTaGTCTCCTGAGCAGCAACTC +
Preference number: 4 (lower is better)
Translates to: PFSAKQWPFIGADLEACPFLMGL*SPEQQL
Trigger: GAGTTGCTGCTCAGGAGATCAGAGTCCCATTAAAAA...AGGGCATGCTTCCAAATCTGCTCCGATGAATGGCCACTGCTTTGCAGAAAATGG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR TCA 90 bp ACCATTTTCTGCAAAGCAGTGGCCATTCATCGGAGCAGATTTGGAAGCATGCCCAAGATCCCACGTCCATaGACAGTCCTACTTAGCAAT +
Preference number: 4 (lower is better)
Translates to: TIFCKAVAIHRSRFGSMPKIPRP*TVLLSN
Trigger: ATTGCTAAGTAGGACTGTTCATGGACGTGGGATCTT...GGGCATGCTTCCAAATCTGCTCCGATGAATGGCCACTGCTTTGCAGAAAATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR TCA 90 bp GTCCCGAATGAGACCTTCTTAATCTTCGGTGGGTCTGAGGTGGAGGAGGATTTGCACGTAGGGTACCAATaGGATAAGACAAAGTCCTTA +
Preference number: 4 (lower is better)
Translates to: VPNETFLIFGGSEVEEDLHVGYQ*DKTKSL
Trigger: TAAGGACTTTGTCTTATCTCATTGGTACCCTACGTG...CAAATCCTCCTCCACCTCAGACCCACCGAAGATTAAGAAGGTCTCATTCGGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR GCA 90 bp GTGTATACAACAGTTGGATATCCTTATGGCTGGCTTGTTAAAGGAGCCAGCTGGCACATAGCTGAGATCTaGTGCAGAAACAGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: VYTTVGYPYGWLVKGASWHIAEI*CRNSWG
Trigger: ACCCCAGCTGTTTCTGCAGCAGATCTCAGCTATGTG...CCAGCTGGCTCCTTTAACAAGCCAGCCATAAGGATATCCAACTGTTGTATACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467067.1
ENST00000469499.5
CDS-3UTR GCA 90 bp CCTAGAATACTTTTCCATCTGAGTCTAACGTACCCCACTGCCTCTAATACGGCCTCGCTGTTCTGTCTTTaGAGTGCTTTGCTGCTGACA +
Preference number: 4 (lower is better)
Translates to: PRILFHLSLTYPTASNTASLFCL*SALLLT
Trigger: TGTCAGCAGCAAAGCACTGCAAAGACAGAACAGCGA...GGCCGTATTAGAGGCAGTGGGGTACGTTAGACTCAGATGGAAAAGTATTCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR GCA 90 bp CCATTTTCTGCAAAGCAGTGGCCATTCATCGGAGCAGATTTGGAAGCATGCCCTGTGAATGGACTTGCCTaGAATGTGTTCAGTTCACAC +
Preference number: 4 (lower is better)
Translates to: PFSAKQWPFIGADLEACPVNGLA*NVFSSH
Trigger: GTGTGAACTGAACACATTGCAGGCAAGTCCATTCAC...AGGGCATGCTTCCAAATCTGCTCCGATGAATGGCCACTGCTTTGCAGAAAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR GCA 90 bp ACCATTTTCTGCAAAGCAGTGGCCATTCATCGGAGCAGATTTGGAAGCATGCCCGTGAGTGAATGGACTTaGCTGCAATGTGTTCAGTTC +
Preference number: 4 (lower is better)
Translates to: TIFCKAVAIHRSRFGSMPVSEWT*LQCVQF
Trigger: GAACTGAACACATTGCAGGCAAGTCCATTCACTCAC...GGGCATGCTTCCAAATCTGCTCCGATGAATGGCCACTGCTTTGCAGAAAATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR CCA 90 bp GTGAGACACCTTGGAGGACAAAGCCACATTGTGTGGAGGAAAACACACCACCATCATTGTGCCTTATTCTaGGACATCTCCAAACCTGTG +
Preference number: 4 (lower is better)
Translates to: VRHLGGQSHIVWRKTHHHHCALF*DISKPV
Trigger: CACAGGTTTGGAGATGTCCCAGAATAAGGCACAATG...ATGGTGGTGTGTTTTCCTCCACACAATGTGGCTTTGTCCTCCAAGGTGTCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474874.5
CDS-3UTR CCA 90 bp ACCATTTTCTGCAAAGCAGTGGCCATTCATCGGAGCAGATTTGGAAGCATGCCCTTTTCTGCAAAGCAGTaGCCATTCATCGGAGCAGAT +
Preference number: 4 (lower is better)
Translates to: TIFCKAVAIHRSRFGSMPFSAKQ*PFIGAD
Trigger: ATCTGCTCCGATGAATGGCCACTGCTTTGCAGAAAA...GGGCATGCTTCCAAATCTGCTCCGATGAATGGCCACTGCTTTGCAGAAAATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467067.1
ENST00000487559.1
CDS-3UTR CCA 90 bp ACTTTTGAGATGGACCATTTTCTGCAAAGCAGTGGCCATTCATCGGAGCAGATTGTGTCAGTGGAGGGGTaGAAGCACAAACCCCATTCA +
Preference number: 4 (lower is better)
Translates to: TFEMDHFLQSSGHSSEQIVSVEG*KHKPHS
Trigger: TGAATGGGGTTTGTGCTTCCACCCCTCCACTGACAC...AATCTGCTCCGATGAATGGCCACTGCTTTGCAGAAAATGGTCCATCTCAAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000467067.1
ENST00000487559.1
CDS-3UTR CCA 90 bp TTCATCGGAGTTAGGAGAAGCTCTGTGTATACAACAGTTGGATATCCTTATGGCAGAGATTGGCAACGGTaGAAGAGGCCTAGAACCCCG +
Preference number: 4 (lower is better)
Translates to: FIGVRRSSVYTTVGYPYGRDWQR*KRPRTP
Trigger: CGGGGTTCTAGGCCTCTTCCACCGTTGCCAATCTCT...GCCATAAGGATATCCAACTGTTGTATACACAGAGCTTCTCCTAACTCCGATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467067.1
ENST00000469499.5
CDS-3UTR CCA 90 bp GCTGAGATCTGCTGCAGAAACAGCTGGGGTATCAAAATATGCATAGTTGATTTGTCGGTGGGTCTGAGGTaGAGGAGGATTTGGATCTGG +
Preference number: 4 (lower is better)
Translates to: AEICCRNSWGIKICIVDLSVGLR*RRIWIW
Trigger: CCAGATCCAAATCCTCCTCCACCTCAGACCCACCGA...CAAATCAACTATGCATATTTTGATACCCCAGCTGTTTCTGCAGCAGATCTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467067.1
ENST00000469499.5
CDS-3UTR CCA 90 bp CCTAGAATACTTTTCCATCTGAGTCTAACGTACCCCACTGCCTCTAATACGGCCGGATATCCTTATGGCTaGCTTGTTAAAGGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: PRILFHLSLTYPTASNTAGYPYG*LVKGAS
Trigger: GCTGGCTCCTTTAACAAGCCAGCCATAAGGATATCC...GGCCGTATTAGAGGCAGTGGGGTACGTTAGACTCAGATGGAAAAGTATTCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR CCA 90 bp CATCTGAGTCTAACGTACCCCACTGCCTCTAATACGGCCCGCACTACGATGAGCACGATAGTAACTAATTaGTTAACCTGCAGCTATGGT +
Preference number: 4 (lower is better)
Translates to: HLSLTYPTASNTARTTMSTIVTN*LTCSYG
Trigger: ACCATAGCTGCAGGTTAACCAATTAGTTACTATCGT...GCTCATCGTAGTGCGGGCCGTATTAGAGGCAGTGGGGTACGTTAGACTCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR CCA 90 bp AGGAGCCAGCTGGTCCCGAATGAGACCTTCTTAATCTTCGGTGGGTCTGAGGTGAATATTGTGAGTGAATaGACTTGCCTGCAATGTGTT +
Preference number: 4 (lower is better)
Translates to: RSQLVPNETFLIFGGSEVNIVSE*TCLQCV
Trigger: AACACATTGCAGGCAAGTCCATTCACTCACAATATT...CACCTCAGACCCACCGAAGATTAAGAAGGTCTCATTCGGGACCAGCTGGCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR TCA 90 bp AACACCCATGCAACCACCACAGGTGTAATTAGAGAGCAGAAGATTCTTAACGCAGGTCAGACACATAGCTaGGATCTGCTGCAGAAACAG +
Preference number: 4 (lower is better)
Translates to: NTHATTTGVIREQKILNAGQTHS*DLLQKQ
Trigger: CTGTTTCTGCAGCAGATCTCAGCTATGTGTCTGACC...TGCGTTAAGAATCTTCTGCTCTCTAATTACACCTGTGGTGGTTGCATGGGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR TCA 90 bp GGGGGAACCTCAGGTTTGTCTTCATCGGAGTTAGGAGAAGCTCTGTGTATACAACTACTTAGCAATCAGTaGCTCAGAATGAAGGCAGTC +
Preference number: 4 (lower is better)
Translates to: GGTSGLSSSELGEALCIQLLSNQ*LRMKAV
Trigger: GACTGCCTTCATTCTGAGTCACTGATTGCTAAGTAG...TTGTATACACAGAGCTTCTCCTAACTCCGATGAAGACAAACCTGAGGTTCCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR GCA 90 bp GCTGTTCTGTCTTTGCAGTGCTTTGCTGCTGACATACTTGGGATCAGGGGCAAATTGCCATTTAAGACATaGGACCATACTAGGCACGTA +
Preference number: 4 (lower is better)
Translates to: AVLSLQCFAADILGIRGKLPFKT*DHTRHV
Trigger: TACGTGCCTAGTATGGTCGCATGTCTTAAATGGCAA...TTTGCCCCTGATCCCAAGTATGTCAGCAGCAAAGCACTGCAAAGACAGAACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR GCA 90 bp AGGAGAAGCTCTGTGTATACAACAGTTGGATATCCTTATGGCTGGCTTGTTAAATCTCCCTTGGACATGTaGACAGCGCACACCCACACA +
Preference number: 4 (lower is better)
Translates to: RRSSVYTTVGYPYGWLVKSPLDM*TAHTHT
Trigger: TGTGTGGGTGTGCGCTGTGCACATGTCCAAGGGAGA...TTTAACAAGCCAGCCATAAGGATATCCAACTGTTGTATACACAGAGCTTCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR CCA 90 bp GATGAGCTACTTCAGTGGGTGGGACCAAGCAGGAACTGTAAGGGAAAATTAGTCTTTTCTGCAAAGCAGTaGCCATTCATCGGAGCAGAT +
Preference number: 4 (lower is better)
Translates to: DELLQWVGPSRNCKGKLVFSAKQ*PFIGAD
Trigger: ATCTGCTCCGATGAATGGCCACTGCTTTGCAGAAAA...GACTAATTTTCCCTTACAGTTCCTGCTTGGTCCCACCCACTGAAGTAGCTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR CCA 90 bp GGAAGCACAAACCCCATTCACTGTGAGTTTCTTAAAACCACATACAACTTGATCGAGGGCTTCAGAGATTaGCAACGGTGGAAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: GSTNPIHCEFLKTTYNLIEGFRD*QRWKRP
Trigger: AGGCCTCTTCCACCGTTGCCAATCTCTGAAGCCCTC...GATCAAGTTGTATGTGGTTTTAAGAAACTCACAGTGAATGGGGTTTGTGCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467067.1
ENST00000469499.5
ENST00000487559.1
CDS-3UTR CCA 90 bp CCTAGAATACTTTTCCATCTGAGTCTAACGTACCCCACTGCCTCTAATACGGCCAGTCTGGCTTTTCTGTaGCTGAAGATATACCGCAGT +
Preference number: 4 (lower is better)
Translates to: PRILFHLSLTYPTASNTASLAFL*LKIYRS
Trigger: ACTGCGGTATATCTTCAGCCACAGAAAAGCCAGACT...GGCCGTATTAGAGGCAGTGGGGTACGTTAGACTCAGATGGAAAAGTATTCTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR TCA 90 bp AACAGCTGGGGTATCAAAATATGCATAGTTGATTTGTCCACACCCACGGAAGCTACATCTCCAAACCTGTaGGGCCCAGGCACTTTAAAA +
Preference number: 4 (lower is better)
Translates to: NSWGIKICIVDLSTPTEATSPNL*GPGTLK
Trigger: TTTTAAAGTGCCTGGGCCTCACAGGTTTGGAGATGT...AGCTTCCGTGGGTGTGGACAAATCAACTATGCATATTTTGATACCCCAGCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469499.5
CDS-3UTR TCA 90 bp AGGAGAAGCTCTGTGTATACAACAGTTGGATATCCTTATGGCTGGCTTGTTAAAGGTATTAGGCGCTCCTaGGCAGAAGAGTTCAGACTG +
Preference number: 4 (lower is better)
Translates to: RRSSVYTTVGYPYGWLVKGIRRS*AEEFRL
Trigger: CAGTCTGAACTCTTCTGCTCAGGAGCGCCTAATACC...TTTAACAAGCCAGCCATAAGGATATCCAACTGTTGTATACACAGAGCTTCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR TCA 90 bp AACACCCATGCAACCACCACAGGTGTAATTAGAGAGCAGAAGATTCTTAACGCAGGCAAGCTGGACTTTTaGGATGGACCATTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: NTHATTTGVIREQKILNAGKLDF*DGPFSA
Trigger: TGCAGAAAATGGTCCATCTCAAAAGTCCAGCTTGCC...TGCGTTAAGAATCTTCTGCTCTCTAATTACACCTGTGGTGGTTGCATGGGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR TCA 90 bp CCTAGAATACTTTTCCATCTGAGTCTAACGTACCCCACTGCCTCTAATACGGCCCAAAATATGCATAGTTaGTTTGTCCACACCCACGGA +
Preference number: 4 (lower is better)
Translates to: PRILFHLSLTYPTASNTAQNMHS*FVHTHG
Trigger: TCCGTGGGTGTGGACAAATCAACTATGCATATTTTG...GGCCGTATTAGAGGCAGTGGGGTACGTTAGACTCAGATGGAAAAGTATTCTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR TCA 90 bp GATGAGCTACTTCAGTGGGTGGGACCAAGCAGGAACTGTAAGGGAAAATTAGTCCGAAGTAACTTCTGCTaGCCATCTTCTATAATCTGG +
Preference number: 4 (lower is better)
Translates to: DELLQWVGPSRNCKGKLVRSNFC*PSSIIW
Trigger: CCAGATTATAGAAGATGGTCAGCAGAAGTTACTTCG...GACTAATTTTCCCTTACAGTTCCTGCTTGGTCCCACCCACTGAAGTAGCTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR TCA 90 bp GATGAGCTACTTCAGTGGGTGGGACCAAGCAGGAACTGTAAGGGAAAATTAGTCAGAAAGATGCTGATGTaGCCTCTGGAATTCAGACAT +
Preference number: 4 (lower is better)
Translates to: DELLQWVGPSRNCKGKLVRKMLM*PLEFRH
Trigger: ATGTCTGAATTCCAGAGGTCACATCAGCATCTTTCT...GACTAATTTTCCCTTACAGTTCCTGCTTGGTCCCACCCACTGAAGTAGCTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR TCA 90 bp ACCATTTTCTGCAAAGCAGTGGCCATTCATCGGAGCAGATTTGGAAGCATGCCCTCGCCTAAGGTTTCATaGAGTAAAGTATGCATCAGA +
Preference number: 4 (lower is better)
Translates to: TIFCKAVAIHRSRFGSMPSPKVS*SKVCIR
Trigger: TCTGATGCATACTTTACTTCATGAAACCTTAGGCGA...GGGCATGCTTCCAAATCTGCTCCGATGAATGGCCACTGCTTTGCAGAAAATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR CCA 90 bp AAAACTGACATCCTAACACTGGCACCTAGAATACTTTTCCATCTGAGTCTAACGGTGTCAGTGGAGGGGTaGAAGCACAAACCCCATTCA +
Preference number: 4 (lower is better)
Translates to: KTDILTLAPRILFHLSLTVSVEG*KHKPHS
Trigger: TGAATGGGGTTTGTGCTTCCACCCCTCCACTGACAC...CGTTAGACTCAGATGGAAAAGTATTCTAGGTGCCAGTGTTAGGATGTCAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR CCA 90 bp GGAAGCACAAACCCCATTCACTGTGAGTTTCTTAAAACCACATACAACTTGATCGTGTCAGTGGAGGGGTaGAAGCACAAACCCCATTCA +
Preference number: 4 (lower is better)
Translates to: GSTNPIHCEFLKTTYNLIVSVEG*KHKPHS
Trigger: TGAATGGGGTTTGTGCTTCCACCCCTCCACTGACAC...GATCAAGTTGTATGTGGTTTTAAGAAACTCACAGTGAATGGGGTTTGTGCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000467067.1
ENST00000469499.5
ENST00000487559.1
CDS-3UTR CCA 90 bp AACACCCATGCAACCACCACAGGTGTAATTAGAGAGCAGAAGATTCTTAACGCATTTTATGGGTGTCAGTaGAGGGGTGGAAGCACAAAC +
Preference number: 4 (lower is better)
Translates to: NTHATTTGVIREQKILNAFYGCQ*RGGSTN
Trigger: GTTTGTGCTTCCACCCCTCCACTGACACCCATAAAA...TGCGTTAAGAATCTTCTGCTCTCTAATTACACCTGTGGTGGTTGCATGGGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR CCA 90 bp CTGCACTTCAATCAAACTGGAAAATTGAGAACCATTTGCTCCTATGTAACCTCTGAGGGCTTCAGAGATTaGCAACGGTGGAAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: LHFNQTGKLRTICSYVTSEGFRD*QRWKRP
Trigger: AGGCCTCTTCCACCGTTGCCAATCTCTGAAGCCCTC...AGAGGTTACATAGGAGCAAATGGTTCTCAATTTTCCAGTTTGATTGAAGTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR CCA 90 bp ACCTCCATTTTGGTCAGACACATAGCTGAGATCTGCTGCAGAAACAGCTGGGGTTGCTGCAGAAACAGCTaGGGTATCAAAATATGCATA +
Preference number: 4 (lower is better)
Translates to: TSILVRHIAEICCRNSWGCCRNS*GIKICI
Trigger: TATGCATATTTTGATACCCCAGCTGTTTCTGCAGCA...ACCCCAGCTGTTTCTGCAGCAGATCTCAGCTATGTGTCTGACCAAAATGGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000467067.1
ENST00000469499.5
CDS-3UTR CCA 90 bp GAGTTAGGAGAAGCTCTGTGTATACAACAGTTGGATATCCTTATGGCTGGCTTGAGGAGGATTTGGATCTaGGACACCTCCATTTTGGTC +
Preference number: 4 (lower is better)
Translates to: ELGEALCIQQLDILMAGLRRIWI*DTSILV
Trigger: GACCAAAATGGAGGTGTCCCAGATCCAAATCCTCCT...CAAGCCAGCCATAAGGATATCCAACTGTTGTATACACAGAGCTTCTCCTAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467067.1
ENST00000469499.5
CDS-3UTR CCA 90 bp AAAACTGACATCCTAACACTGGCACCTAGAATACTTTTCCATCTGAGTCTAACGGAGGTATGGGAACTCTaGGGGGAACCTCAGGTTTGT +
Preference number: 4 (lower is better)
Translates to: KTDILTLAPRILFHLSLTEVWEL*GEPQVC
Trigger: ACAAACCTGAGGTTCCCCCCAGAGTTCCCATACCTC...CGTTAGACTCAGATGGAAAAGTATTCTAGGTGCCAGTGTTAGGATGTCAGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR CCA 90 bp ATTCACTGTGAGTTTCTTAAAACCACATACAACTTGATCCTCTTCATGTGGTCCAAGACGGAAGGCTTTTaGGACTCGGTGTGCGCGAGT +
Preference number: 4 (lower is better)
Translates to: IHCEFLKTTYNLILFMWSKTEGF*DSVCAS
Trigger: ACTCGCGCACACCGAGTCCCAAAAGCCTTCCGTCTT...GGACCACATGAAGAGGATCAAGTTGTATGTGGTTTTAAGAAACTCACAGTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR CCA 90 bp CAGTGGCCATTCATCGGAGCAGATTTGGAAGCATGCCCTGGAATGAACGAGAGATTAACGCACATGGTGTaGTTCAAAGAACAAACTATC +
Preference number: 4 (lower is better)
Translates to: QWPFIGADLEACPGMNERLTHMV*FKEQTI
Trigger: GATAGTTTGTTCTTTGAACCACACCATGTGCGTTAA...TCTCTCGTTCATTCCAGGGCATGCTTCCAAATCTGCTCCGATGAATGGCCACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR CCA 90 bp AAAGCAGTGGCCATTCATCGGAGCAGATTTGGAAGCATGCCCTGGAATGAACGATTTGGAAGCATGCCCTaGAATGAACGAGAGATATTA +
Preference number: 4 (lower is better)
Translates to: KAVAIHRSRFGSMPWNERFGSMP*NEREIL
Trigger: TAATATCTCTCGTTCATTCCAGGGCATGCTTCCAAA...TCGTTCATTCCAGGGCATGCTTCCAAATCTGCTCCGATGAATGGCCACTGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR TCA 90 bp CTGCACTTCAATCAAACTGGAAAATTGAGAACCATTTGCTCCTATGTAACCTCTGGGACTCTGATCTCCTaGGCAGCAACTCCTGCTATT +
Preference number: 4 (lower is better)
Translates to: LHFNQTGKLRTICSYVTSGTLIS*AATPAI
Trigger: AATAGCAGGAGTTGCTGCTCAGGAGATCAGAGTCCC...AGAGGTTACATAGGAGCAAATGGTTCTCAATTTTCCAGTTTGATTGAAGTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR TCA 90 bp CTCTGGAATTCAGACATACTGAGCTATGGGTCAGAAGTGTTTTACTTAAAAAGCGGTATTAGGCGCTCCTaGGCAGAAGAGTTCAGACTG +
Preference number: 4 (lower is better)
Translates to: LWNSDILSYGSEVFYLKSGIRRS*AEEFRL
Trigger: CAGTCTGAACTCTTCTGCTCAGGAGCGCCTAATACC...GCTTTTTAAGTAAAACACTTCTGACCCATAGCTCAGTATGTCTGAATTCCAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR TCA 90 bp AAAACTGACATCCTAACACTGGCACCTAGAATACTTTTCCATCTGAGTCTAACGGGTCAGACACATAGCTaGGATCTGCTGCAGAAACAG +
Preference number: 4 (lower is better)
Translates to: KTDILTLAPRILFHLSLTGQTHS*DLLQKQ
Trigger: CTGTTTCTGCAGCAGATCTCAGCTATGTGTCTGACC...CGTTAGACTCAGATGGAAAAGTATTCTAGGTGCCAGTGTTAGGATGTCAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR TCA 90 bp GGAAGCACAAACCCCATTCACTGTGAGTTTCTTAAAACCACATACAACTTGATCGGTCAGACACATAGCTaGGATCTGCTGCAGAAACAG +
Preference number: 4 (lower is better)
Translates to: GSTNPIHCEFLKTTYNLIGQTHS*DLLQKQ
Trigger: CTGTTTCTGCAGCAGATCTCAGCTATGTGTCTGACC...GATCAAGTTGTATGTGGTTTTAAGAAACTCACAGTGAATGGGGTTTGTGCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467067.1
ENST00000469499.5
CDS-3UTR TCA 90 bp CTGCACTTCAATCAAACTGGAAAATTGAGAACCATTTGCTCCTATGTAACCTCTCCAGCTGGTCCCGAATaGGACCTTCTTAATCTTCGG +
Preference number: 4 (lower is better)
Translates to: LHFNQTGKLRTICSYVTSPAGPE*DLLNLR
Trigger: CCGAAGATTAAGAAGGTCTCATTCGGGACCAGCTGG...AGAGGTTACATAGGAGCAAATGGTTCTCAATTTTCCAGTTTGATTGAAGTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR TCA 90 bp CCTAGAATACTTTTCCATCTGAGTCTAACGTACCCCACTGCCTCTAATACGGCCTCTAAACCTTCCACATaGAGACAGAGAGTTCAACTA +
Preference number: 4 (lower is better)
Translates to: PRILFHLSLTYPTASNTASKPST*RQRVQL
Trigger: TAGTTGAACTCTCTGTCTTCATGTGGAAGGTTTAGA...GGCCGTATTAGAGGCAGTGGGGTACGTTAGACTCAGATGGAAAAGTATTCTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR TCA 90 bp CCATTTTCTGCAAAGCAGTGGCCATTCATCGGAGCAGATTTGGAAGCATGCCCTGCATCAGAGCTGGAATaGGAACTAATTCTTGATTTT +
Preference number: 4 (lower is better)
Translates to: PFSAKQWPFIGADLEACPASELE*ELILDF
Trigger: AAAATCAAGAATTAGTTCTCATTCCAGCTCTGATGC...AGGGCATGCTTCCAAATCTGCTCCGATGAATGGCCACTGCTTTGCAGAAAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR GCA 90 bp CTATCTCCCTTGGACATGTGCACAGCGCACACCCACACATCACAGGCAAGTTTTAGACAAAGTCCTTATTaGTGGCACATCATAATATTG +
Preference number: 4 (lower is better)
Translates to: LSPLDMCTAHTHTSQASFRQSPY*WHIIIL
Trigger: CAATATTATGATGTGCCAGCAATAAGGACTTTGTCT...AAAACTTGCCTGTGATGTGTGGGTGTGCGCTGTGCACATGTCCAAGGGAGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR CCA 90 bp CCTAGAATACTTTTCCATCTGAGTCTAACGTACCCCACTGCCTCTAATACGGCCTCAGACTGTAGGCCATaGTTATCGGGTCAATATTTA +
Preference number: 4 (lower is better)
Translates to: PRILFHLSLTYPTASNTASDCRP*LSGQYL
Trigger: TAAATATTGACCCGATAACCATGGCCTACAGTCTGA...GGCCGTATTAGAGGCAGTGGGGTACGTTAGACTCAGATGGAAAAGTATTCTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR CCA 90 bp TTCATCGGAGTTAGGAGAAGCTCTGTGTATACAACAGTTGGATATCCTTATGGCTTTTATGGGTGTCAGTaGAGGGGTGGAAGCACAAAC +
Preference number: 4 (lower is better)
Translates to: FIGVRRSSVYTTVGYPYGFYGCQ*RGGSTN
Trigger: GTTTGTGCTTCCACCCCTCCACTGACACCCATAAAA...GCCATAAGGATATCCAACTGTTGTATACACAGAGCTTCTCCTAACTCCGATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467067.1
ENST00000469499.5
CDS-3UTR CCA 90 bp TACTGTATCTTCTTCCATTTGCTCAATTTTCAGTCTATCAGGACTCATTTCTCCAGAGATTGGCAACGGTaGAAGAGGCCTAGAACCCCG +
Preference number: 4 (lower is better)
Translates to: YCIFFHLLNFQSIRTHFSRDWQR*KRPRTP
Trigger: CGGGGTTCTAGGCCTCTTCCACCGTTGCCAATCTCT...GGAGAAATGAGTCCTGATAGACTGAAAATTGAGCAAATGGAAGAAGATACAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR CCA 90 bp AAAACTGACATCCTAACACTGGCACCTAGAATACTTTTCCATCTGAGTCTAACGTCAGCAGGTAATGGCTaGATTTGGGCGCCTCCATTT +
Preference number: 4 (lower is better)
Translates to: KTDILTLAPRILFHLSLTSAGNG*IWAPPF
Trigger: AAATGGAGGCGCCCAAATCCAGCCATTACCTGCTGA...CGTTAGACTCAGATGGAAAAGTATTCTAGGTGCCAGTGTTAGGATGTCAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377482.10
3UTR CAA 72 bp TCATCGGAGTTAGGAGAAGCTCTGTGTATACAACAGTaGGATATCCTTATGGCTGGCTTGTTAAAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: SSELGEALCIQQ*DILMAGLLKEP
Trigger: TGGCTCCTTTAACAAGCCAGCCATAAGGATATCCAACTGTTGTATACACAGAGCTTCTCCTAACTCCGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467067.1
ENST00000469499.5
CDS-3UTR TCA 90 bp GCTCTGTGTATACAACAGTTGGATATCCTTATGGCTGGCTTGTTAAAGGAGCCACAAAATATGCATAGTTaGTTTGTCCACACCCACGGA +
Preference number: 4 (lower is better)
Translates to: ALCIQQLDILMAGLLKEPQNMHS*FVHTHG
Trigger: TCCGTGGGTGTGGACAAATCAACTATGCATATTTTG...TGGCTCCTTTAACAAGCCAGCCATAAGGATATCCAACTGTTGTATACACAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467067.1
ENST00000469499.5
CDS-3UTR TCA 90 bp ATACTGAATAGGAACCAGCAACACAAGGCCAGCTTGTGTTGTATGTTTATTAATACCTCTGCTGAACCATaGCCCCAAGGTCTAAGGAGA +
Preference number: 4 (lower is better)
Translates to: ILNRNQQHKASLCCMFINTSAEP*PQGLRR
Trigger: TCTCCTTAGACCTTGGGGTCATGGTTCAGCAGAGGT...ATTAATAAACATACAACACAAGCTGGCCTTGTGTTGCTGGTTCCTATTCAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR TCA 90 bp TTTGTCTTCATCGGAGTTAGGAGAAGCTCTGTGTATACAACAGTTGGATATCCTCCACAGCTTTCTTCCTaGGTGAAACACTTGACTGCT +
Preference number: 4 (lower is better)
Translates to: FVFIGVRRSSVYTTVGYPPQLSS*VKHLTA
Trigger: AGCAGTCAAGTGTTTCACTCAGGAAGAAAGCTGTGG...AGGATATCCAACTGTTGTATACACAGAGCTTCTCCTAACTCCGATGAAGACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR GCA 90 bp GAGTTAGGAGAAGCTCTGTGTATACAACAGTTGGATATCCTTATGGCTGGCTTGAGATGGACCATTTTCTaGAAAGCAGTGGCCATTCAT +
Preference number: 4 (lower is better)
Translates to: ELGEALCIQQLDILMAGLRWTIF*KAVAIH
Trigger: ATGAATGGCCACTGCTTTGCAGAAAATGGTCCATCT...CAAGCCAGCCATAAGGATATCCAACTGTTGTATACACAGAGCTTCTCCTAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467067.1
ENST00000469499.5
CDS-3UTR GCA 90 bp TGGGACACCTCCATTTTGGTCAGACACATAGCTGAGATCTGCTGCAGAAACAGCTGGGGTATCAAAATATaGATAGTTGATTTGTCCACA +
Preference number: 4 (lower is better)
Translates to: WDTSILVRHIAEICCRNSWGIKI*IVDLST
Trigger: TGTGGACAAATCAACTATGCATATTTTGATACCCCA...GCTGTTTCTGCAGCAGATCTCAGCTATGTGTCTGACCAAAATGGAGGTGTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000467067.1
ENST00000469499.5
CDS-3UTR GCA 90 bp ACCTCAGGTTTGTCTTCATCGGAGTTAGGAGAAGCTCTGTGTATACAACAGTTGGTTCTGTCTTTGCAGTaGTTTGCTGCTGACATACTT +
Preference number: 4 (lower is better)
Translates to: TSGLSSSELGEALCIQQLVLSLQ*FAADIL
Trigger: AAGTATGTCAGCAGCAAAGCACTGCAAAGACAGAAC...CAACTGTTGTATACACAGAGCTTCTCCTAACTCCGATGAAGACAAACCTGAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR GCA 90 bp TTTGTCTTCATCGGAGTTAGGAGAAGCTCTGTGTATACAACAGTTGGATATCCTTCGCTGTTCTGTCTTTaGAGTGCTTTGCTGCTGACA +
Preference number: 4 (lower is better)
Translates to: FVFIGVRRSSVYTTVGYPSLFCL*SALLLT
Trigger: TGTCAGCAGCAAAGCACTGCAAAGACAGAACAGCGA...AGGATATCCAACTGTTGTATACACAGAGCTTCTCCTAACTCCGATGAAGACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR GCA 90 bp CCTAGAATACTTTTCCATCTGAGTCTAACGTACCCCACTGCCTCTAATACGGCCAAATTGAGAACCATTTaGTCCTATGTAACCTCTGCT +
Preference number: 4 (lower is better)
Translates to: PRILFHLSLTYPTASNTAKLRTI*SYVTSA
Trigger: AGCAGAGGTTACATAGGAGCAAATGGTTCTCAATTT...GGCCGTATTAGAGGCAGTGGGGTACGTTAGACTCAGATGGAAAAGTATTCTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR GCA 90 bp AAACATGCATTCGATACTAGTAAGAAAGGTGGGAAATCTCGCCTAAGGTTTCATAGTGAAACACTTGACTaGTGTCACCCCGAGAACACC +
Preference number: 4 (lower is better)
Translates to: KHAFDTSKKGGKSRLRFHSETLD*CHPENT
Trigger: GGTGTTCTCGGGGTGACAGCAGTCAAGTGTTTCACT...ATGAAACCTTAGGCGAGATTTCCCACCTTTCTTACTAGTATCGAATGCATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR CCA 90 bp CCCATTCACTGTGAGTTTCTTAAAACCACATACAACTTGATCCTCTTCATGTGGTTTTATGGGTGTCAGTaGAGGGGTGGAAGCACAAAC +
Preference number: 4 (lower is better)
Translates to: PIHCEFLKTTYNLILFMWFYGCQ*RGGSTN
Trigger: GTTTGTGCTTCCACCCCTCCACTGACACCCATAAAA...CCACATGAAGAGGATCAAGTTGTATGTGGTTTTAAGAAACTCACAGTGAATGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000467067.1
ENST00000469499.5
ENST00000487559.1
CDS-3UTR CCA 90 bp GGAAGCACAAACCCCATTCACTGTGAGTTTCTTAAAACCACATACAACTTGATCGGATATCCTTATGGCTaGCTTGTTAAAGGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: GSTNPIHCEFLKTTYNLIGYPYG*LVKGAS
Trigger: GCTGGCTCCTTTAACAAGCCAGCCATAAGGATATCC...GATCAAGTTGTATGTGGTTTTAAGAAACTCACAGTGAATGGGGTTTGTGCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467067.1
ENST00000469499.5
CDS-3UTR CCA 90 bp TCGGAGTTAGGAGAAGCTCTGTGTATACAACAGTTGGATATCCTTATGGCTGGCTGTGTATACAACAGTTaGATATCCTTATGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: SELGEALCIQQLDILMAGCVYNS*ISLWLA
Trigger: AGCCAGCCATAAGGATATCCAACTGTTGTATACACA...GCCAGCCATAAGGATATCCAACTGTTGTATACACAGAGCTTCTCCTAACTCCGA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467067.1
ENST00000469499.5
CDS-3UTR CCA 90 bp GTGAATGGACTTGCCTGCAATGTGTTCAGTTCACACACAGCTCTTGACAAAGATATAATCTGGCTTTACTaGTCTAGGAGGTATGGGAAC +
Preference number: 4 (lower is better)
Translates to: VNGLACNVFSSHTALDKDIIWLY*SRRYGN
Trigger: GTTCCCATACCTCCTAGACCAGTAAAGCCAGATTAT...ATCTTTGTCAAGAGCTGTGTGTGAACTGAACACATTGCAGGCAAGTCCATTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR CCA 90 bp AACAGCTGGGGTATCAAAATATGCATAGTTGATTTGTCCACACCCACGGAAGCTCCATCTTCTATAATCTaGCTTTACTGGTCTAGGAGG +
Preference number: 4 (lower is better)
Translates to: NSWGIKICIVDLSTPTEAPSSII*LYWSRR
Trigger: CCTCCTAGACCAGTAAAGCCAGATTATAGAAGATGG...AGCTTCCGTGGGTGTGGACAAATCAACTATGCATATTTTGATACCCCAGCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR CCA 90 bp CTAAACAATACTGTATCTTCTTCCATTTGCTCAATTTTCAGTCTATCAGGACTCAAGACGGAAGGCTTTTaGGACTCGGTGTGCGCGAGT +
Preference number: 4 (lower is better)
Translates to: LNNTVSSSICSIFSLSGLKTEGF*DSVCAS
Trigger: ACTCGCGCACACCGAGTCCCAAAAGCCTTCCGTCTT...GAGTCCTGATAGACTGAAAATTGAGCAAATGGAAGAAGATACAGTATTGTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR CCA 90 bp AAAACTGACATCCTAACACTGGCACCTAGAATACTTTTCCATCTGAGTCTAACGGGTAATGGCTGGATTTaGGCGCCTCCATTTGTTTCT +
Preference number: 4 (lower is better)
Translates to: KTDILTLAPRILFHLSLTGNGWI*APPFVS
Trigger: AGAAACAAATGGAGGCGCCCAAATCCAGCCATTACC...CGTTAGACTCAGATGGAAAAGTATTCTAGGTGCCAGTGTTAGGATGTCAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR CCA 90 bp CTGCACTTCAATCAAACTGGAAAATTGAGAACCATTTGCTCCTATGTAACCTCTACCCATGGTAAAGAATaGATACCCTGCCCTCCATGG +
Preference number: 4 (lower is better)
Translates to: LHFNQTGKLRTICSYVTSTHGKE*IPCPPW
Trigger: CCATGGAGGGCAGGGTATCCATTCTTTACCATGGGT...AGAGGTTACATAGGAGCAAATGGTTCTCAATTTTCCAGTTTGATTGAAGTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR CCA 90 bp CTGCACTTCAATCAAACTGGAAAATTGAGAACCATTTGCTCCTATGTAACCTCTAGCTACTTCAGTGGGTaGGACCAAGCAGGAACTGTA +
Preference number: 4 (lower is better)
Translates to: LHFNQTGKLRTICSYVTSSYFSG*DQAGTV
Trigger: TACAGTTCCTGCTTGGTCCCACCCACTGAAGTAGCT...AGAGGTTACATAGGAGCAAATGGTTCTCAATTTTCCAGTTTGATTGAAGTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR TCA 90 bp AACCCCATTCACTGTGAGTTTCTTAAAACCACATACAACTTGATCCTCTTCATGACATCTCCAAACCTGTaGGGCCCAGGCACTTTAAAA +
Preference number: 4 (lower is better)
Translates to: NPIHCEFLKTTYNLILFMTSPNL*GPGTLK
Trigger: TTTTAAAGTGCCTGGGCCTCACAGGTTTGGAGATGT...CATGAAGAGGATCAAGTTGTATGTGGTTTTAAGAAACTCACAGTGAATGGGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469499.5
ENST00000487559.1
CDS-3UTR TCA 90 bp AAAACTGACATCCTAACACTGGCACCTAGAATACTTTTCCATCTGAGTCTAACGTTTTTAATGGGACTCTaGTCTCCTGAGCAGCAACTC +
Preference number: 4 (lower is better)
Translates to: KTDILTLAPRILFHLSLTFLMGL*SPEQQL
Trigger: GAGTTGCTGCTCAGGAGATCAGAGTCCCATTAAAAA...CGTTAGACTCAGATGGAAAAGTATTCTAGGTGCCAGTGTTAGGATGTCAGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR TCA 90 bp TTTGTCTTCATCGGAGTTAGGAGAAGCTCTGTGTATACAACAGTTGGATATCCTTTTTTAATGGGACTCTaGTCTCCTGAGCAGCAACTC +
Preference number: 4 (lower is better)
Translates to: FVFIGVRRSSVYTTVGYPFLMGL*SPEQQL
Trigger: GAGTTGCTGCTCAGGAGATCAGAGTCCCATTAAAAA...AGGATATCCAACTGTTGTATACACAGAGCTTCTCCTAACTCCGATGAAGACAAA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000467067.1
ENST00000469499.5
CDS-3UTR TCA 90 bp AAAACTGACATCCTAACACTGGCACCTAGAATACTTTTCCATCTGAGTCTAACGATCCCCAGGAAATACTaGATAGGAACCAGCAACACA +
Preference number: 4 (lower is better)
Translates to: KTDILTLAPRILFHLSLTIPRKY*IGTSNT
Trigger: TGTGTTGCTGGTTCCTATTCAGTATTTCCTGGGGAT...CGTTAGACTCAGATGGAAAAGTATTCTAGGTGCCAGTGTTAGGATGTCAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR TCA 90 bp GGTTTGTCTTCATCGGAGTTAGGAGAAGCTCTGTGTATACAACAGTTGGATATCATCAGTGACTCAGAATaGAGGCAGTCGAGTACAATA +
Preference number: 4 (lower is better)
Translates to: GLSSSELGEALCIQQLDIISDSE*RQSSTI
Trigger: TATTGTACTCGACTGCCTTCATTCTGAGTCACTGAT...GATATCCAACTGTTGTATACACAGAGCTTCTCCTAACTCCGATGAAGACAAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR GCA 90 bp CTAAACAATACTGTATCTTCTTCCATTTGCTCAATTTTCAGTCTATCAGGACTCTTTTGGGACTCGGTGTaGGCGAGTTACTCGGTGACA +
Preference number: 4 (lower is better)
Translates to: LNNTVSSSICSIFSLSGLFWDSV*ASYSVT
Trigger: TGTCACCGAGTAACTCGCGCACACCGAGTCCCAAAA...GAGTCCTGATAGACTGAAAATTGAGCAAATGGAAGAAGATACAGTATTGTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR GCA 90 bp ATTCACTGTGAGTTTCTTAAAACCACATACAACTTGATCCTCTTCATGTGGTCCGCAGATTTGGAAGCATaGCCTGGAATGAACGAGAGA +
Preference number: 4 (lower is better)
Translates to: IHCEFLKTTYNLILFMWSADLEA*PGMNER
Trigger: TCTCTCGTTCATTCCAGGGCATGCTTCCAAATCTGC...GGACCACATGAAGAGGATCAAGTTGTATGTGGTTTTAAGAAACTCACAGTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR CCA 90 bp TTTGTCTTCATCGGAGTTAGGAGAAGCTCTGTGTATACAACAGTTGGATATCCTCATTGTGCCTTATTCTaGGACATCTCCAAACCTGTG +
Preference number: 4 (lower is better)
Translates to: FVFIGVRRSSVYTTVGYPHCALF*DISKPV
Trigger: CACAGGTTTGGAGATGTCCCAGAATAAGGCACAATG...AGGATATCCAACTGTTGTATACACAGAGCTTCTCCTAACTCCGATGAAGACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469499.5
CDS-3UTR CCA 90 bp AACACCCATGCAACCACCACAGGTGTAATTAGAGAGCAGAAGATTCTTAACGCATCAGACTGTAGGCCATaGTTATCGGGTCAATATTTA +
Preference number: 4 (lower is better)
Translates to: NTHATTTGVIREQKILNASDCRP*LSGQYL
Trigger: TAAATATTGACCCGATAACCATGGCCTACAGTCTGA...TGCGTTAAGAATCTTCTGCTCTCTAATTACACCTGTGGTGGTTGCATGGGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR CCA 90 bp ACTTTTGAGATGGACCATTTTCTGCAAAGCAGTGGCCATTCATCGGAGCAGATTTCAGACTGTAGGCCATaGTTATCGGGTCAATATTTA +
Preference number: 4 (lower is better)
Translates to: TFEMDHFLQSSGHSSEQISDCRP*LSGQYL
Trigger: TAAATATTGACCCGATAACCATGGCCTACAGTCTGA...AATCTGCTCCGATGAATGGCCACTGCTTTGCAGAAAATGGTCCATCTCAAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467067.1
ENST00000487559.1
CDS-3UTR CCA 90 bp CTCTGGAATTCAGACATACTGAGCTATGGGTCAGAAGTGTTTTACTTAAAAAGCTTTTATGGGTGTCAGTaGAGGGGTGGAAGCACAAAC +
Preference number: 4 (lower is better)
Translates to: LWNSDILSYGSEVFYLKSFYGCQ*RGGSTN
Trigger: GTTTGTGCTTCCACCCCTCCACTGACACCCATAAAA...GCTTTTTAAGTAAAACACTTCTGACCCATAGCTCAGTATGTCTGAATTCCAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR CCA 90 bp CTCTGGAATTCAGACATACTGAGCTATGGGTCAGAAGTGTTTTACTTAAAAAGCAGGAGGATTTGGATCTaGGACACCTCCATTTTGGTC +
Preference number: 4 (lower is better)
Translates to: LWNSDILSYGSEVFYLKSRRIWI*DTSILV
Trigger: GACCAAAATGGAGGTGTCCCAGATCCAAATCCTCCT...GCTTTTTAAGTAAAACACTTCTGACCCATAGCTCAGTATGTCTGAATTCCAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR CCA 90 bp GTGAATGGACTTGCCTGCAATGTGTTCAGTTCACACACAGCTCTTGACAAAGATTGTGTATACAACAGTTaGATATCCTTATGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: VNGLACNVFSSHTALDKDCVYNS*ISLWLA
Trigger: AGCCAGCCATAAGGATATCCAACTGTTGTATACACA...ATCTTTGTCAAGAGCTGTGTGTGAACTGAACACATTGCAGGCAAGTCCATTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR CCA 90 bp CTGCACTTCAATCAAACTGGAAAATTGAGAACCATTTGCTCCTATGTAACCTCTTGCAAGGAACCTTACTaGCAGATCCTTCGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: LHFNQTGKLRTICSYVTSCKEPY*QILRCS
Trigger: AGAACAGCGAAGGATCTGCCAGTAAGGTTCCTTGCA...AGAGGTTACATAGGAGCAAATGGTTCTCAATTTTCCAGTTTGATTGAAGTGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR CCA 90 bp AAAACTGACATCCTAACACTGGCACCTAGAATACTTTTCCATCTGAGTCTAACGTGTTTACGCTTCACGTaGCCACCCAGATCCATTTTT +
Preference number: 4 (lower is better)
Translates to: KTDILTLAPRILFHLSLTCLRFT*PPRSIF
Trigger: AAAAATGGATCTGGGTGGCCACGTGAAGCGTAAACA...CGTTAGACTCAGATGGAAAAGTATTCTAGGTGCCAGTGTTAGGATGTCAGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377482.10
3UTR CAA 72 bp CCCATTCACTGTGAGTTTCTTAAAACCACATACAACTaGATCCTCTTCATGTGGTCCCAAGTTTTCACTTGG +
Preference number: 4 (lower is better)
Translates to: PIHCEFLKTTYN*ILFMWSQVFTW
Trigger: CCAAGTGAAAACTTGGGACCACATGAAGAGGATCAAGTTGTATGTGGTTTTAAGAAACTCACAGTGAATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467067.1
ENST00000487559.1
CDS-3UTR TCA 90 bp ATACTGAATAGGAACCAGCAACACAAGGCCAGCTTGTGTTGTATGTTTATTAATACATCTCCAAACCTGTaGGGCCCAGGCACTTTAAAA +
Preference number: 4 (lower is better)
Translates to: ILNRNQQHKASLCCMFINTSPNL*GPGTLK
Trigger: TTTTAAAGTGCCTGGGCCTCACAGGTTTGGAGATGT...ATTAATAAACATACAACACAAGCTGGCCTTGTGTTGCTGGTTCCTATTCAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR TCA 90 bp AACCCCATTCACTGTGAGTTTCTTAAAACCACATACAACTTGATCCTCTTCATGAAACCACATACAACTTaGTCCTCTTCATGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: NPIHCEFLKTTYNLILFMKPHTT*SSSCGP
Trigger: GGGACCACATGAAGAGGATCAAGTTGTATGTGGTTT...CATGAAGAGGATCAAGTTGTATGTGGTTTTAAGAAACTCACAGTGAATGGGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467067.1
ENST00000469499.5
ENST00000487559.1
CDS-3UTR TCA 90 bp CTTAAAACCACATACAACTTGATCCTCTTCATGTGGTCCCAAGTTTTCACTTGGCAAAATATGCATAGTTaGTTTGTCCACACCCACGGA +
Preference number: 4 (lower is better)
Translates to: LKTTYNLILFMWSQVFTWQNMHS*FVHTHG
Trigger: TCCGTGGGTGTGGACAAATCAACTATGCATATTTTG...CCAAGTGAAAACTTGGGACCACATGAAGAGGATCAAGTTGTATGTGGTTTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR TCA 90 bp CTAAACAATACTGTATCTTCTTCCATTTGCTCAATTTTCAGTCTATCAGGACTCTGGCTTTTCTGTGGCTaGAGATATACCGCAGTCAGC +
Preference number: 4 (lower is better)
Translates to: LNNTVSSSICSIFSLSGLWLFCG*RYTAVS
Trigger: GCTGACTGCGGTATATCTTCAGCCACAGAAAAGCCA...GAGTCCTGATAGACTGAAAATTGAGCAAATGGAAGAAGATACAGTATTGTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR TCA 90 bp CTGCACTTCAATCAAACTGGAAAATTGAGAACCATTTGCTCCTATGTAACCTCTTGTGACAGGTACAGGTaGCAATATGGTTGCCAAGTA +
Preference number: 4 (lower is better)
Translates to: LHFNQTGKLRTICSYVTSCDRYR*QYGCQV
Trigger: TACTTGGCAACCATATTGTCACCTGTACCTGTCACA...AGAGGTTACATAGGAGCAAATGGTTCTCAATTTTCCAGTTTGATTGAAGTGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR TCA 90 bp GTGAATGGACTTGCCTGCAATGTGTTCAGTTCACACACAGCTCTTGACAAAGATAAGCATGCCCTGGAATaGACGAGAGATATTAATAAA +
Preference number: 4 (lower is better)
Translates to: VNGLACNVFSSHTALDKDKHALE*TRDINK
Trigger: TTTATTAATATCTCTCGTTCATTCCAGGGCATGCTT...ATCTTTGTCAAGAGCTGTGTGTGAACTGAACACATTGCAGGCAAGTCCATTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR GCA 90 bp CTAAACAATACTGTATCTTCTTCCATTTGCTCAATTTTCAGTCTATCAGGACTCGCAGATTTGGAAGCATaGCCAAGTGGTATTAGGCGC +
Preference number: 4 (lower is better)
Translates to: LNNTVSSSICSIFSLSGLADLEA*PSGIRR
Trigger: GCGCCTAATACCACTTGGGCATGCTTCCAAATCTGC...GAGTCCTGATAGACTGAAAATTGAGCAAATGGAAGAAGATACAGTATTGTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR GCA 90 bp ATACTGAATAGGAACCAGCAACACAAGGCCAGCTTGTGTTGTATGTTTATTAATATAGCTGAGATCTGCTaGAGAAACAGCTGGGGTATC +
Preference number: 4 (lower is better)
Translates to: ILNRNQQHKASLCCMFINIAEIC*RNSWGI
Trigger: GATACCCCAGCTGTTTCTGCAGCAGATCTCAGCTAT...ATTAATAAACATACAACACAAGCTGGCCTTGTGTTGCTGGTTCCTATTCAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR GCA 90 bp CTAAACAATACTGTATCTTCTTCCATTTGCTCAATTTTCAGTCTATCAGGACTCCACATAGCTGAGATCTaGTGCAGAAACAGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: LNNTVSSSICSIFSLSGLHIAEI*CRNSWG
Trigger: ACCCCAGCTGTTTCTGCAGCAGATCTCAGCTATGTG...GAGTCCTGATAGACTGAAAATTGAGCAAATGGAAGAAGATACAGTATTGTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR CCA 90 bp CTCTGGAATTCAGACATACTGAGCTATGGGTCAGAAGTGTTTTACTTAAAAAGCCATTGTGCCTTATTCTaGGACATCTCCAAACCTGTG +
Preference number: 4 (lower is better)
Translates to: LWNSDILSYGSEVFYLKSHCALF*DISKPV
Trigger: CACAGGTTTGGAGATGTCCCAGAATAAGGCACAATG...GCTTTTTAAGTAAAACACTTCTGACCCATAGCTCAGTATGTCTGAATTCCAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR CCA 90 bp TGTGAGTTTCTTAAAACCACATACAACTTGATCCTCTTCATGTGGTCCCAAGTTCATTGTGCCTTATTCTaGGACATCTCCAAACCTGTG +
Preference number: 4 (lower is better)
Translates to: CEFLKTTYNLILFMWSQVHCALF*DISKPV
Trigger: CACAGGTTTGGAGATGTCCCAGAATAAGGCACAATG...AACTTGGGACCACATGAAGAGGATCAAGTTGTATGTGGTTTTAAGAAACTCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469499.5
ENST00000487559.1
CDS-3UTR CCA 90 bp TACTGTATCTTCTTCCATTTGCTCAATTTTCAGTCTATCAGGACTCATTTCTCCTCATCGGAGCAGATTTaGAAGCATGCCCAAGTGGTA +
Preference number: 4 (lower is better)
Translates to: YCIFFHLLNFQSIRTHFSSSEQI*KHAQVV
Trigger: TACCACTTGGGCATGCTTCCAAATCTGCTCCGATGA...GGAGAAATGAGTCCTGATAGACTGAAAATTGAGCAAATGGAAGAAGATACAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR CCA 90 bp TGTGAGTTTCTTAAAACCACATACAACTTGATCCTCTTCATGTGGTCCCAAGTTTTTTCTGCAAAGCAGTaGCCATTCATCGGAGCAGAT +
Preference number: 4 (lower is better)
Translates to: CEFLKTTYNLILFMWSQVFSAKQ*PFIGAD
Trigger: ATCTGCTCCGATGAATGGCCACTGCTTTGCAGAAAA...AACTTGGGACCACATGAAGAGGATCAAGTTGTATGTGGTTTTAAGAAACTCACA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000467067.1
ENST00000469499.5
ENST00000487559.1
CDS-3UTR CCA 90 bp CTGCACTTCAATCAAACTGGAAAATTGAGAACCATTTGCTCCTATGTAACCTCTGTACAGGTGACAATATaGTTGCCAAGTAACCTGCTC +
Preference number: 4 (lower is better)
Translates to: LHFNQTGKLRTICSYVTSVQVTI*LPSNLL
Trigger: GAGCAGGTTACTTGGCAACCATATTGTCACCTGTAC...AGAGGTTACATAGGAGCAAATGGTTCTCAATTTTCCAGTTTGATTGAAGTGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR CCA 90 bp GGTTTGTCTTCATCGGAGTTAGGAGAAGCTCTGTGTATACAACAGTTGGATATCTCATCGGAGCAGATTTaGAAGCATGCCTTTTTAAAC +
Preference number: 4 (lower is better)
Translates to: GLSSSELGEALCIQQLDISSEQI*KHAFLN
Trigger: GTTTAAAAAGGCATGCTTCCAAATCTGCTCCGATGA...GATATCCAACTGTTGTATACACAGAGCTTCTCCTAACTCCGATGAAGACAAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469499.5
CDS-3UTR TCA 90 bp TACTGTATCTTCTTCCATTTGCTCAATTTTCAGTCTATCAGGACTCATTTCTCCAAACCACATACAACTTaGTCCTCTTCATGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: YCIFFHLLNFQSIRTHFSKPHTT*SSSCGP
Trigger: GGGACCACATGAAGAGGATCAAGTTGTATGTGGTTT...GGAGAAATGAGTCCTGATAGACTGAAAATTGAGCAAATGGAAGAAGATACAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR TCA 90 bp TACTGTATCTTCTTCCATTTGCTCAATTTTCAGTCTATCAGGACTCATTTCTCCGGAATTCAGACATACTaGGCTATGGGTCAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: YCIFFHLLNFQSIRTHFSGIQTY*AMGQKC
Trigger: ACACTTCTGACCCATAGCTCAGTATGTCTGAATTCC...GGAGAAATGAGTCCTGATAGACTGAAAATTGAGCAAATGGAAGAAGATACAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR TCA 90 bp ATTCACTGTGAGTTTCTTAAAACCACATACAACTTGATCCTCTTCATGTGGTCCCACATCATAATATTGTaGGTGAATGGACTTGCCTGC +
Preference number: 4 (lower is better)
Translates to: IHCEFLKTTYNLILFMWSHIIIL*VNGLAC
Trigger: GCAGGCAAGTCCATTCACTCACAATATTATGATGTG...GGACCACATGAAGAGGATCAAGTTGTATGTGGTTTTAAGAAACTCACAGTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR GCA 90 bp CTCTGGAATTCAGACATACTGAGCTATGGGTCAGAAGTGTTTTACTTAAAAAGCAGATGGACCATTTTCTaGAAAGCAGTGGCCATTCAT +
Preference number: 4 (lower is better)
Translates to: LWNSDILSYGSEVFYLKSRWTIF*KAVAIH
Trigger: ATGAATGGCCACTGCTTTGCAGAAAATGGTCCATCT...GCTTTTTAAGTAAAACACTTCTGACCCATAGCTCAGTATGTCTGAATTCCAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR GCA 90 bp GCTCTGTGTATACAACAGTTGGATATCCTTATGGCTGGCTTGTTAAAGGAGCCATGGGGTATCAAAATATaGATAGTTGATTTGTCCACA +
Preference number: 4 (lower is better)
Translates to: ALCIQQLDILMAGLLKEPWGIKI*IVDLST
Trigger: TGTGGACAAATCAACTATGCATATTTTGATACCCCA...TGGCTCCTTTAACAAGCCAGCCATAAGGATATCCAACTGTTGTATACACAGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467067.1
ENST00000469499.5
CDS-3UTR GCA 90 bp ATTCACTGTGAGTTTCTTAAAACCACATACAACTTGATCCTCTTCATGTGGTCCGCAGATTTGGAAGCATaGCTTTTTAAACTCACTGCG +
Preference number: 4 (lower is better)
Translates to: IHCEFLKTTYNLILFMWSADLEA*LFKLTA
Trigger: CGCAGTGAGTTTAAAAAGGCATGCTTCCAAATCTGC...GGACCACATGAAGAGGATCAAGTTGTATGTGGTTTTAAGAAACTCACAGTGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469499.5
CDS-3UTR CCA 90 bp GGAAGCACAAACCCCATTCACTGTGAGTTTCTTAAAACCACATACAACTTGATCTGCTGCAGAAACAGCTaGGGTATCAAAATATGCATA +
Preference number: 4 (lower is better)
Translates to: GSTNPIHCEFLKTTYNLICCRNS*GIKICI
Trigger: TATGCATATTTTGATACCCCAGCTGTTTCTGCAGCA...GATCAAGTTGTATGTGGTTTTAAGAAACTCACAGTGAATGGGGTTTGTGCTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000467067.1
ENST00000469499.5
CDS-3UTR CCA 90 bp CTGCACTTCAATCAAACTGGAAAATTGAGAACCATTTGCTCCTATGTAACCTCTATAATCTGGCTTTACTaGTCTAGGAGGTATGGGAAC +
Preference number: 4 (lower is better)
Translates to: LHFNQTGKLRTICSYVTSIIWLY*SRRYGN
Trigger: GTTCCCATACCTCCTAGACCAGTAAAGCCAGATTAT...AGAGGTTACATAGGAGCAAATGGTTCTCAATTTTCCAGTTTGATTGAAGTGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR CCA 90 bp CTGCACTTCAATCAAACTGGAAAATTGAGAACCATTTGCTCCTATGTAACCTCTCCATCTTCTATAATCTaGCTTTACTGGTCTAGGAGG +
Preference number: 4 (lower is better)
Translates to: LHFNQTGKLRTICSYVTSPSSII*LYWSRR
Trigger: CCTCCTAGACCAGTAAAGCCAGATTATAGAAGATGG...AGAGGTTACATAGGAGCAAATGGTTCTCAATTTTCCAGTTTGATTGAAGTGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR CCA 90 bp TACTGTATCTTCTTCCATTTGCTCAATTTTCAGTCTATCAGGACTCATTTCTCCACGCAACATGAAACCTaGAAGTATGAGGCCTTGGTA +
Preference number: 4 (lower is better)
Translates to: YCIFFHLLNFQSIRTHFSTQHET*KYEALV
Trigger: TACCAAGGCCTCATACTTCCAGGTTTCATGTTGCGT...GGAGAAATGAGTCCTGATAGACTGAAAATTGAGCAAATGGAAGAAGATACAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377482.10
3UTR CAA 72 bp GCATATAATTTACATGAATACCATACTGTACCAGCCTaGCCATTTAAGACATGCGACCATACTAGGCACGTA +
Preference number: 4 (lower is better)
Translates to: AYNLHEYHTVPA*PFKTCDHTRHV
Trigger: TACGTGCCTAGTATGGTCGCATGTCTTAAATGGCAAGGCTGGTACAGTATGGTATTCATGTAAATTATATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR TCA 90 bp CTGCACTTCAATCAAACTGGAAAATTGAGAACCATTTGCTCCTATGTAACCTCTATACATGGAAGGATGTaGAAATCGGAACACCAACTA +
Preference number: 4 (lower is better)
Translates to: LHFNQTGKLRTICSYVTSIHGRM*KSEHQL
Trigger: TAGTTGGTGTTCCGATTTTCACATCCTTCCATGTAT...AGAGGTTACATAGGAGCAAATGGTTCTCAATTTTCCAGTTTGATTGAAGTGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR GCA 90 bp TACTGTATCTTCTTCCATTTGCTCAATTTTCAGTCTATCAGGACTCATTTCTCCGTTCTGTCTTTGCAGTaGTTTGCTGCTGACATACTT +
Preference number: 4 (lower is better)
Translates to: YCIFFHLLNFQSIRTHFSVLSLQ*FAADIL
Trigger: AAGTATGTCAGCAGCAAAGCACTGCAAAGACAGAAC...GGAGAAATGAGTCCTGATAGACTGAAAATTGAGCAAATGGAAGAAGATACAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR GCA 90 bp TACTGTATCTTCTTCCATTTGCTCAATTTTCAGTCTATCAGGACTCATTTCTCCAAAGAATGGATACCCTaGCCTCCATGGAAAAGATTG +
Preference number: 4 (lower is better)
Translates to: YCIFFHLLNFQSIRTHFSKEWIP*PPWKRL
Trigger: CAATCTTTTCCATGGAGGGCAGGGTATCCATTCTTT...GGAGAAATGAGTCCTGATAGACTGAAAATTGAGCAAATGGAAGAAGATACAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR GCA 90 bp AAAACTGACATCCTAACACTGGCACCTAGAATACTTTTCCATCTGAGTCTAACGCTGTTAAGAGAACATTaGAGTAATGTACCTCTGTTA +
Preference number: 4 (lower is better)
Translates to: KTDILTLAPRILFHLSLTLLREH*SNVPLL
Trigger: TAACAGAGGTACATTACTGCAATGTTCTCTTAACAG...CGTTAGACTCAGATGGAAAAGTATTCTAGGTGCCAGTGTTAGGATGTCAGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR CCA 90 bp TACTGTATCTTCTTCCATTTGCTCAATTTTCAGTCTATCAGGACTCATTTCTCCTGCTGCAGAAACAGCTaGGGTATCAAAATATGCATA +
Preference number: 4 (lower is better)
Translates to: YCIFFHLLNFQSIRTHFSCCRNS*GIKICI
Trigger: TATGCATATTTTGATACCCCAGCTGTTTCTGCAGCA...GGAGAAATGAGTCCTGATAGACTGAAAATTGAGCAAATGGAAGAAGATACAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR TCA 90 bp ATACTGAATAGGAACCAGCAACACAAGGCCAGCTTGTGTTGTATGTTTATTAATATCAAACTGGAAAATTaGGAACCATTTGCTCCTATG +
Preference number: 4 (lower is better)
Translates to: ILNRNQQHKASLCCMFINIKLEN*EPFAPM
Trigger: CATAGGAGCAAATGGTTCTCAATTTTCCAGTTTGAT...ATTAATAAACATACAACACAAGCTGGCCTTGTGTTGCTGGTTCCTATTCAGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR GCA 90 bp CTCTGGAATTCAGACATACTGAGCTATGGGTCAGAAGTGTTTTACTTAAAAAGCTGGGGTATCAAAATATaGATAGTTGATTTGTCCACA +
Preference number: 4 (lower is better)
Translates to: LWNSDILSYGSEVFYLKSWGIKI*IVDLST
Trigger: TGTGGACAAATCAACTATGCATATTTTGATACCCCA...GCTTTTTAAGTAAAACACTTCTGACCCATAGCTCAGTATGTCTGAATTCCAGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR CCA 90 bp CTAAACAATACTGTATCTTCTTCCATTTGCTCAATTTTCAGTCTATCAGGACTCGTTAACCTGCAGCTATaGTCTATGGTTATACCACAA +
Preference number: 4 (lower is better)
Translates to: LNNTVSSSICSIFSLSGLVNLQL*SMVIPQ
Trigger: TTGTGGTATAACCATAGACCATAGCTGCAGGTTAAC...GAGTCCTGATAGACTGAAAATTGAGCAAATGGAAGAAGATACAGTATTGTTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR CCA 90 bp ATACTGAATAGGAACCAGCAACACAAGGCCAGCTTGTGTTGTATGTTTATTAATAGACATACTGAGCTATaGGTCAGAAGTGTTTTACTT +
Preference number: 4 (lower is better)
Translates to: ILNRNQQHKASLCCMFINRHTEL*VRSVLL
Trigger: AAGTAAAACACTTCTGACCCATAGCTCAGTATGTCT...ATTAATAAACATACAACACAAGCTGGCCTTGTGTTGCTGGTTCCTATTCAGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS CCA 90 bp GCGCCGCGGGCTCAGGGGCCCGGACATCGCGCAGGCGCCTCTTGCTaGCTCGCGCTCCCGCTAGCACTCTGCCTCGCACCGGACCGCCGT +
Preference number: 5 (lower is better)
Translates to: APRAQGPGHRAGASC*LALPLALCLAPDRR
Trigger: ACGGCGGTCCGGTGCGAGGCAGAGTGCTAGCGGGAGCGCGAGCCAGCAAGAGGCGCCTGCGCGATGTCCGGGCCCCTGAGCCCGCGGCGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS GCA 90 bp TCAGCGCCGCGGGCTCAGGGGCCCGGACATCGCGCAGGCGCCTCTTaGTGGCTCGCGCTCCCGCTAGCACTCTGCCTCGCACCGGACCGC +
Preference number: 5 (lower is better)
Translates to: SAPRAQGPGHRAGAS*WLALPLALCLAPDR
Trigger: GCGGTCCGGTGCGAGGCAGAGTGCTAGCGGGAGCGCGAGCCAGCAAGAGGCGCCTGCGCGATGTCCGGGCCCCTGAGCCCGCGGCGCTGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR CAA 90 bp TTGGAGGACAAAGCCACATTGTGTGGAGGAAAACACACCACCATTCAGGCCCATTCGCGCAGGCGCCTCTaGCTGGCTCGCGCTCCCGCT +
Preference number: 5 (lower is better)
Translates to: LEDKATLCGGKHTTIQAHSRRRL*LARAPA
Trigger: AGCGGGAGCGCGAGCCAGCAAGAGGCGCCTGCGCGA...ATGGGCCTGAATGGTGGTGTGTTTTCCTCCACACAATGTGGCTTTGTCCTCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474874.5
CDS-3UTR CAA 90 bp CCTAGAATACTTTTCCATCTGAGTCTAACGTACCCCACTGCCTCTAATACGGCCTCGCGCAGGCGCCTCTaGCTGGCTCGCGCTCCCGCT +
Preference number: 5 (lower is better)
Translates to: PRILFHLSLTYPTASNTASRRRL*LARAPA
Trigger: AGCGGGAGCGCGAGCCAGCAAGAGGCGCCTGCGCGA...GGCCGTATTAGAGGCAGTGGGGTACGTTAGACTCAGATGGAAAAGTATTCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR CAA 90 bp TCAGGTTTGTCTTCATCGGAGTTAGGAGAAGCTCTGTGTATACAACAGTTGGATTCGCGCAGGCGCCTCTaGCTGGCTCGCGCTCCCGCT +
Preference number: 5 (lower is better)
Translates to: SGLSSSELGEALCIQQLDSRRRL*LARAPA
Trigger: AGCGGGAGCGCGAGCCAGCAAGAGGCGCCTGCGCGA...ATCCAACTGTTGTATACACAGAGCTTCTCCTAACTCCGATGAAGACAAACCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469499.5
CDS-3UTR CAA 90 bp CCCATTCACTGTGAGTTTCTTAAAACCACATACAACTTGATCCTCTTCATGTGGTCGCGCAGGCGCCTCTaGCTGGCTCGCGCTCCCGCT +
Preference number: 5 (lower is better)
Translates to: PIHCEFLKTTYNLILFMWSRRRL*LARAPA
Trigger: AGCGGGAGCGCGAGCCAGCAAGAGGCGCCTGCGCGA...CCACATGAAGAGGATCAAGTTGTATGTGGTTTTAAGAAACTCACAGTGAATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469499.5
ENST00000487559.1
CDS-3UTR CAA 90 bp GAGATTGGCAACGGTGGAAGAGGCCTAGAACCCCGTTCACAAAGAGGGGCACAGTGTCTTTGCAGTGCTTaGCTGCTGACATACTTGGGA +
Preference number: 5 (lower is better)
Translates to: EIGNGGRGLEPRSQRGAQCLCSA*LLTYLG
Trigger: TCCCAAGTATGTCAGCAGCAAAGCACTGCAAAGACA...CTGTGCCCCTCTTTGTGAACGGGGTTCTAGGCCTCTTCCACCGTTGCCAATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR CAA 90 bp CATCTGAGTCTAACGTACCCCACTGCCTCTAATACGGCCCGCACTACGATGAGCTTCGCTGTTCTGTCTTaGCAGTGCTTTGCTGCTGAC +
Preference number: 5 (lower is better)
Translates to: HLSLTYPTASNTARTTMSFAVLS*QCFAAD
Trigger: GTCAGCAGCAAAGCACTGCAAAGACAGAACAGCGAA...GCTCATCGTAGTGCGGGCCGTATTAGAGGCAGTGGGGTACGTTAGACTCAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR CAA 90 bp GTCCCGAATGAGACCTTCTTAATCTTCGGTGGGTCTGAGGTGGAGGAGGATTTGGGGGGAACCTCAGGTTaGTCTTCATCGGAGTTAGGA +
Preference number: 5 (lower is better)
Translates to: VPNETFLIFGGSEVEEDLGGTSG*SSSELG
Trigger: TCCTAACTCCGATGAAGACAAACCTGAGGTTCCCCC...CAAATCCTCCTCCACCTCAGACCCACCGAAGATTAAGAAGGTCTCATTCGGGAC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000467067.1
ENST00000469499.5
CDS-3UTR CAA 90 bp GTCCCGAATGAGACCTTCTTAATCTTCGGTGGGTCTGAGGTGGAGGAGGATTTGGGGGTCAGGCTGTTGTaGGAAATAGTTCAGGTTTCC +
Preference number: 5 (lower is better)
Translates to: VPNETFLIFGGSEVEEDLGVRLL*EIVQVS
Trigger: GGAAACCTGAACTATTTCCAACAACAGCCTGACCCC...CAAATCCTCCTCCACCTCAGACCCACCGAAGATTAAGAAGGTCTCATTCGGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR CAA 90 bp GTGAATGGACTTGCCTGCAATGTGTTCAGTTCACACACAGCTCTTGACAAAGATAGAGGGCTTCAGAGATaGGCAACGGTGGAAGAGGCC +
Preference number: 5 (lower is better)
Translates to: VNGLACNVFSSHTALDKDRGLQR*ATVEEA
Trigger: GGCCTCTTCCACCGTTGCCAATCTCTGAAGCCCTCT...ATCTTTGTCAAGAGCTGTGTGTGAACTGAACACATTGCAGGCAAGTCCATTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR CAA 90 bp CCATTTTCTGCAAAGCAGTGGCCATTCATCGGAGCAGATTTGGAAGCATGCCCTTGGGACACCTCCATTTaGGTCAGACACATAGCTGAG +
Preference number: 5 (lower is better)
Translates to: PFSAKQWPFIGADLEACPWDTSI*VRHIAE
Trigger: CTCAGCTATGTGTCTGACCAAAATGGAGGTGTCCCA...AGGGCATGCTTCCAAATCTGCTCCGATGAATGGCCACTGCTTTGCAGAAAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR CAA 90 bp GGGGGAACCTCAGGTTTGTCTTCATCGGAGTTAGGAGAAGCTCTGTGTATACAAGGGGGAACCTCAGGTTaGTCTTCATCGGAGTTAGGA +
Preference number: 5 (lower is better)
Translates to: GGTSGLSSSELGEALCIQGGTSG*SSSELG
Trigger: TCCTAACTCCGATGAAGACAAACCTGAGGTTCCCCC...TTGTATACACAGAGCTTCTCCTAACTCCGATGAAGACAAACCTGAGGTTCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000467067.1
ENST00000469499.5
CDS-3UTR CAA 90 bp GGGGGAACCTCAGGTTTGTCTTCATCGGAGTTAGGAGAAGCTCTGTGTATACAATTGCTGCTGACATACTaGGGATCAGGGGCAAAGCTC +
Preference number: 5 (lower is better)
Translates to: GGTSGLSSSELGEALCIQLLLTY*GSGAKL
Trigger: GAGCTTTGCCCCTGATCCCAAGTATGTCAGCAGCAA...TTGTATACACAGAGCTTCTCCTAACTCCGATGAAGACAAACCTGAGGTTCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS TCA 90 bp CCTGCTATTGACATTGTGCCTTATTCTGGGACATCTCCAAACCTGTaGGGCCCAGGCACTTTAAAATCAACCAGTAGCTTTCATTCCCCC +
Preference number: 5 (lower is better)
Translates to: PAIDIVPYSGTSPNL*GPGTLKSTSSFHSP
Trigger: GGGGGAATGAAAGCTACTGGTTGATTTTAAAGTGCCTGGGCCTCACAGGTTTGGAGATGTCCCAGAATAAGGCACAATGTCAATAGCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377482.10
ENST00000469499.5
ENST00000474874.5
ENST00000487559.1
CDS-3UTR CAA 90 bp CTTAAAACCACATACAACTTGATCCTCTTCATGTGGTCCCAAGTTTTCACTTGGAGAGGGCTTCAGAGATaGGCAACGGTGGAAGAGGCC +
Preference number: 5 (lower is better)
Translates to: LKTTYNLILFMWSQVFTWRGLQR*ATVEEA
Trigger: GGCCTCTTCCACCGTTGCCAATCTCTGAAGCCCTCT...CCAAGTGAAAACTTGGGACCACATGAAGAGGATCAAGTTGTATGTGGTTTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467067.1
ENST00000487559.1
CDS-3UTR CAA 90 bp TGTGAGTTTCTTAAAACCACATACAACTTGATCCTCTTCATGTGGTCCCAAGTTAGAGGGCTTCAGAGATaGGCAACGGTGGAAGAGGCC +
Preference number: 5 (lower is better)
Translates to: CEFLKTTYNLILFMWSQVRGLQR*ATVEEA
Trigger: GGCCTCTTCCACCGTTGCCAATCTCTGAAGCCCTCT...AACTTGGGACCACATGAAGAGGATCAAGTTGTATGTGGTTTTAAGAAACTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467067.1
ENST00000469499.5
ENST00000487559.1
CDS-3UTR CAA 90 bp TGTGAGTTTCTTAAAACCACATACAACTTGATCCTCTTCATGTGGTCCCAAGTTGTGACAAAGGTTCTCTaGGCGGTACTTTGGGAGGCC +
Preference number: 5 (lower is better)
Translates to: CEFLKTTYNLILFMWSQVVTKVL*AVLWEA
Trigger: GGCCTCCCAAAGTACCGCCAAGAGAACCTTTGTCAC...AACTTGGGACCACATGAAGAGGATCAAGTTGTATGTGGTTTTAAGAAACTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR CAA 90 bp TCAGGTTTGTCTTCATCGGAGTTAGGAGAAGCTCTGTGTATACAACAGTTGGATTTCGCTGTTCTGTCTTaGCAGTGCTTTGCTGCTGAC +
Preference number: 5 (lower is better)
Translates to: SGLSSSELGEALCIQQLDFAVLS*QCFAAD
Trigger: GTCAGCAGCAAAGCACTGCAAAGACAGAACAGCGAA...ATCCAACTGTTGTATACACAGAGCTTCTCCTAACTCCGATGAAGACAAACCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR CAA 90 bp TGGGACACCTCCATTTTGGTCAGACACATAGCTGAGATCTGCTGCAGAAACAGCTTCATCGGAGCAGATTaGGAAGCATGCCTTTTTAAA +
Preference number: 5 (lower is better)
Translates to: WDTSILVRHIAEICCRNSFIGAD*EACLFK
Trigger: TTTAAAAAGGCATGCTTCCAAATCTGCTCCGATGAA...GCTGTTTCTGCAGCAGATCTCAGCTATGTGTCTGACCAAAATGGAGGTGTCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469499.5
CDS-3UTR CAA 90 bp AACAGCTGGGGTATCAAAATATGCATAGTTGATTTGTCCACACCCACGGAAGCTCTAGGGGTCAGGCTGTaGTTGGAAATAGTTCAGGTT +
Preference number: 5 (lower is better)
Translates to: NSWGIKICIVDLSTPTEALGVRL*LEIVQV
Trigger: AACCTGAACTATTTCCAACAACAGCCTGACCCCTAG...AGCTTCCGTGGGTGTGGACAAATCAACTATGCATATTTTGATACCCCAGCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR CAA 90 bp CAGTGGCCATTCATCGGAGCAGATTTGGAAGCATGCCCTGGAATGAACGAGAGAGTCGAGTACAATAGCTaGAGAAAAACACAGTTATCT +
Preference number: 5 (lower is better)
Translates to: QWPFIGADLEACPGMNERVEYNS*RKTQLS
Trigger: AGATAACTGTGTTTTTCTCAAGCTATTGTACTCGAC...TCTCTCGTTCATTCCAGGGCATGCTTCCAAATCTGCTCCGATGAATGGCCACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR CAA 90 bp GAGTTAGGAGAAGCTCTGTGTATACAACAGTTGGATATCCTTATGGCTGGCTTGCATACTGTACCAGCCTaGCCATTTAAGACATGCGAC +
Preference number: 5 (lower is better)
Translates to: ELGEALCIQQLDILMAGLHTVPA*PFKTCD
Trigger: GTCGCATGTCTTAAATGGCAAGGCTGGTACAGTATG...CAAGCCAGCCATAAGGATATCCAACTGTTGTATACACAGAGCTTCTCCTAACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS TCA 90 bp CCATGGCTCGGCCATTATGTAGAAATCCAGTTTTTAATGGGACTCTaGTCTCCTGAGCAGCAACTCCTGCTATTGACATTGTGCCTTATT +
Preference number: 5 (lower is better)
Translates to: PWLGHYVEIQFLMGL*SPEQQLLLLTLCLI
Trigger: AATAAGGCACAATGTCAATAGCAGGAGTTGCTGCTCAGGAGATCAGAGTCCCATTAAAAACTGGATTTCTACATAATGGCCGAGCCATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377482.10
ENST00000467067.1
ENST00000469499.5
ENST00000474874.5
ENST00000487559.1
CDS-3UTR CAA 90 bp CTAAACAATACTGTATCTTCTTCCATTTGCTCAATTTTCAGTCTATCAGGACTCAGAGGGCTTCAGAGATaGGCAACGGTGGAAGAGGCC +
Preference number: 5 (lower is better)
Translates to: LNNTVSSSICSIFSLSGLRGLQR*ATVEEA
Trigger: GGCCTCTTCCACCGTTGCCAATCTCTGAAGCCCTCT...GAGTCCTGATAGACTGAAAATTGAGCAAATGGAAGAAGATACAGTATTGTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR CAA 90 bp ATCGGAGTTAGGAGAAGCTCTGTGTATACAACAGTTGGATATCCTTATGGCTGGATATGCATAGTTGATTaGTCCACACCCACGGAAGCT +
Preference number: 5 (lower is better)
Translates to: IGVRRSSVYTTVGYPYGWICIVD*STPTEA
Trigger: AGCTTCCGTGGGTGTGGACAAATCAACTATGCATAT...CCAGCCATAAGGATATCCAACTGTTGTATACACAGAGCTTCTCCTAACTCCGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467067.1
ENST00000469499.5
CDS-3UTR CAA 90 bp GCTCTGTGTATACAACAGTTGGATATCCTTATGGCTGGCTTGTTAAAGGAGCCAATATGCATAGTTGATTaGTCCACACCCACGGAAGCT +
Preference number: 5 (lower is better)
Translates to: ALCIQQLDILMAGLLKEPICIVD*STPTEA
Trigger: AGCTTCCGTGGGTGTGGACAAATCAACTATGCATAT...TGGCTCCTTTAACAAGCCAGCCATAAGGATATCCAACTGTTGTATACACAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467067.1
ENST00000469499.5
CDS-3UTR CAA 90 bp AAAACTGACATCCTAACACTGGCACCTAGAATACTTTTCCATCTGAGTCTAACGATCCTTATGGCTGGCTaGTTAAAGGAGCCAGCTGGT +
Preference number: 5 (lower is better)
Translates to: KTDILTLAPRILFHLSLTILMAG*LKEPAG
Trigger: ACCAGCTGGCTCCTTTAACAAGCCAGCCATAAGGAT...CGTTAGACTCAGATGGAAAAGTATTCTAGGTGCCAGTGTTAGGATGTCAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR CAA 90 bp GGAAGCACAAACCCCATTCACTGTGAGTTTCTTAAAACCACATACAACTTGATCATCCTTATGGCTGGCTaGTTAAAGGAGCCAGCTGGT +
Preference number: 5 (lower is better)
Translates to: GSTNPIHCEFLKTTYNLIILMAG*LKEPAG
Trigger: ACCAGCTGGCTCCTTTAACAAGCCAGCCATAAGGAT...GATCAAGTTGTATGTGGTTTTAAGAAACTCACAGTGAATGGGGTTTGTGCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467067.1
ENST00000469499.5
CDS-3UTR CAA 90 bp CTCTGGAATTCAGACATACTGAGCTATGGGTCAGAAGTGTTTTACTTAAAAAGCTTGCTGCTGACATACTaGGGATCAGGGGCAAAGCTC +
Preference number: 5 (lower is better)
Translates to: LWNSDILSYGSEVFYLKSLLLTY*GSGAKL
Trigger: GAGCTTTGCCCCTGATCCCAAGTATGTCAGCAGCAA...GCTTTTTAAGTAAAACACTTCTGACCCATAGCTCAGTATGTCTGAATTCCAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR CAA 90 bp GATGAGCTACTTCAGTGGGTGGGACCAAGCAGGAACTGTAAGGGAAAATTAGTCAAAATTGAGAACCATTaGCTCCTATGTAACCTCTGC +
Preference number: 5 (lower is better)
Translates to: DELLQWVGPSRNCKGKLVKIENH*LLCNLC
Trigger: GCAGAGGTTACATAGGAGCAAATGGTTCTCAATTTT...GACTAATTTTCCCTTACAGTTCCTGCTTGGTCCCACCCACTGAAGTAGCTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR CAA 90 bp ATTCACTGTGAGTTTCTTAAAACCACATACAACTTGATCCTCTTCATGTGGTCCTGGGACACCTCCATTTaGGTCAGACACATAGCTGAG +
Preference number: 5 (lower is better)
Translates to: IHCEFLKTTYNLILFMWSWDTSI*VRHIAE
Trigger: CTCAGCTATGTGTCTGACCAAAATGGAGGTGTCCCA...GGACCACATGAAGAGGATCAAGTTGTATGTGGTTTTAAGAAACTCACAGTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467067.1
ENST00000469499.5
CDS-3UTR CAA 90 bp AACCCCATTCACTGTGAGTTTCTTAAAACCACATACAACTTGATCCTCTTCATGATCCTTATGGCTGGCTaGTTAAAGGAGCCAGCTGGT +
Preference number: 5 (lower is better)
Translates to: NPIHCEFLKTTYNLILFMILMAG*LKEPAG
Trigger: ACCAGCTGGCTCCTTTAACAAGCCAGCCATAAGGAT...CATGAAGAGGATCAAGTTGTATGTGGTTTTAAGAAACTCACAGTGAATGGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467067.1
ENST00000469499.5
CDS-3UTR CAA 90 bp TACTGTATCTTCTTCCATTTGCTCAATTTTCAGTCTATCAGGACTCATTTCTCCGGGGGAACCTCAGGTTaGTCTTCATCGGAGTTAGGA +
Preference number: 5 (lower is better)
Translates to: YCIFFHLLNFQSIRTHFSGGTSG*SSSELG
Trigger: TCCTAACTCCGATGAAGACAAACCTGAGGTTCCCCC...GGAGAAATGAGTCCTGATAGACTGAAAATTGAGCAAATGGAAGAAGATACAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR CAA 90 bp CTAAACAATACTGTATCTTCTTCCATTTGCTCAATTTTCAGTCTATCAGGACTCGTGACAAAGGTTCTCTaGGCGGTACTTTGGGAGGCC +
Preference number: 5 (lower is better)
Translates to: LNNTVSSSICSIFSLSGLVTKVL*AVLWEA
Trigger: GGCCTCCCAAAGTACCGCCAAGAGAACCTTTGTCAC...GAGTCCTGATAGACTGAAAATTGAGCAAATGGAAGAAGATACAGTATTGTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR CAA 90 bp GATGAGCTACTTCAGTGGGTGGGACCAAGCAGGAACTGTAAGGGAAAATTAGTCCAACACAAGGCCAGCTaGTGTTGTATGTTTATTAAT +
Preference number: 5 (lower is better)
Translates to: DELLQWVGPSRNCKGKLVQHKAS*CCMFIN
Trigger: ATTAATAAACATACAACACAAGCTGGCCTTGTGTTG...GACTAATTTTCCCTTACAGTTCCTGCTTGGTCCCACCCACTGAAGTAGCTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR CAA 90 bp ATTCACTGTGAGTTTCTTAAAACCACATACAACTTGATCCTCTTCATGTGGTCCTATCTTCTGAATCTGTaGCCACTAGGGGTCAGGCTG +
Preference number: 5 (lower is better)
Translates to: IHCEFLKTTYNLILFMWSYLLNL*PLGVRL
Trigger: CAGCCTGACCCCTAGTGGCAACAGATTCAGAAGATA...GGACCACATGAAGAGGATCAAGTTGTATGTGGTTTTAAGAAACTCACAGTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS TCA 90 bp GACAAGCTAACCCGAATCCAGACTGTTCTTCTCAAATGCTTACTGTaGTCAGATTTTCAGAATACATACCAAGTGGTATTAGGCGCTCCT +
Preference number: 5 (lower is better)
Translates to: DKLTRIQTVLLKCLL*SDFQNTYQVVLGAP
Trigger: AGGAGCGCCTAATACCACTTGGTATGTATTCTGAAAATCTGATCACAGTAAGCATTTGAGAAGAACAGTCTGGATTCGGGTTAGCTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467067.1
CDS-3UTR CAA 90 bp AGGAGAAGCTCTGTGTATACAACAGTTGGATATCCTTATGGCTGGCTTGTTAAACTGTGTATACAACAGTaGGATATCCTTATGGCTGGC +
Preference number: 5 (lower is better)
Translates to: RRSSVYTTVGYPYGWLVKLCIQQ*DILMAG
Trigger: GCCAGCCATAAGGATATCCAACTGTTGTATACACAG...TTTAACAAGCCAGCCATAAGGATATCCAACTGTTGTATACACAGAGCTTCTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467067.1
ENST00000469499.5
CDS-3UTR CAA 90 bp CTGCACTTCAATCAAACTGGAAAATTGAGAACCATTTGCTCCTATGTAACCTCTATATGCATAGTTGATTaGTCCACACCCACGGAAGCT +
Preference number: 5 (lower is better)
Translates to: LHFNQTGKLRTICSYVTSICIVD*STPTEA
Trigger: AGCTTCCGTGGGTGTGGACAAATCAACTATGCATAT...AGAGGTTACATAGGAGCAAATGGTTCTCAATTTTCCAGTTTGATTGAAGTGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR CAA 90 bp CTAAACAATACTGTATCTTCTTCCATTTGCTCAATTTTCAGTCTATCAGGACTCTGGGACACCTCCATTTaGGTCAGACACATAGCTGAG +
Preference number: 5 (lower is better)
Translates to: LNNTVSSSICSIFSLSGLWDTSI*VRHIAE
Trigger: CTCAGCTATGTGTCTGACCAAAATGGAGGTGTCCCA...GAGTCCTGATAGACTGAAAATTGAGCAAATGGAAGAAGATACAGTATTGTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR CAA 90 bp CTGCACTTCAATCAAACTGGAAAATTGAGAACCATTTGCTCCTATGTAACCTCTCTGTGTATACAACAGTaGGATATCCTTATGGCTGGC +
Preference number: 5 (lower is better)
Translates to: LHFNQTGKLRTICSYVTSLCIQQ*DILMAG
Trigger: GCCAGCCATAAGGATATCCAACTGTTGTATACACAG...AGAGGTTACATAGGAGCAAATGGTTCTCAATTTTCCAGTTTGATTGAAGTGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR CAA 90 bp AACCCCATTCACTGTGAGTTTCTTAAAACCACATACAACTTGATCCTCTTCATGCTGTGTATACAACAGTaGGATATCCTTATGGCTGGC +
Preference number: 5 (lower is better)
Translates to: NPIHCEFLKTTYNLILFMLCIQQ*DILMAG
Trigger: GCCAGCCATAAGGATATCCAACTGTTGTATACACAG...CATGAAGAGGATCAAGTTGTATGTGGTTTTAAGAAACTCACAGTGAATGGGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467067.1
ENST00000469499.5
CDS-3UTR CAA 90 bp TACTGTATCTTCTTCCATTTGCTCAATTTTCAGTCTATCAGGACTCATTTCTCCTGTCTTTGCAGTGCTTaGCTGCTGACATACTTGGGA +
Preference number: 5 (lower is better)
Translates to: YCIFFHLLNFQSIRTHFSCLCSA*LLTYLG
Trigger: TCCCAAGTATGTCAGCAGCAAAGCACTGCAAAGACA...GGAGAAATGAGTCCTGATAGACTGAAAATTGAGCAAATGGAAGAAGATACAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR CAA 90 bp CTAAACAATACTGTATCTTCTTCCATTTGCTCAATTTTCAGTCTATCAGGACTCCAGGTGACAATATGGTaGCCAAGTAACCTGCTCTCC +
Preference number: 5 (lower is better)
Translates to: LNNTVSSSICSIFSLSGLQVTIW*PSNLLS
Trigger: GGAGAGCAGGTTACTTGGCAACCATATTGTCACCTG...GAGTCCTGATAGACTGAAAATTGAGCAAATGGAAGAAGATACAGTATTGTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS-3UTR CAA 90 bp TACTGTATCTTCTTCCATTTGCTCAATTTTCAGTCTATCAGGACTCATTTCTCCAAAACCACATACAACTaGATCCTCTTCATGTGGTCC +
Preference number: 5 (lower is better)
Translates to: YCIFFHLLNFQSIRTHFSKTTYN*ILFMWS
Trigger: GGACCACATGAAGAGGATCAAGTTGTATGTGGTTTT...GGAGAAATGAGTCCTGATAGACTGAAAATTGAGCAAATGGAAGAAGATACAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS CAA 90 bp CTCAGCGCCGCGGGCTCAGGGGCCCGGACATCGCGCAGGCGCCTCTaGCTGGCTCGCGCTCCCGCTAGCACTCTGCCTCGCACCGGACCG +
Preference number: 6 (lower is better)
Translates to: LSAAGSGARTSRRRL*LARAPASTLPRTGP
Trigger: CGGTCCGGTGCGAGGCAGAGTGCTAGCGGGAGCGCGAGCCAGCAAGAGGCGCCTGCGCGATGTCCGGGCCCCTGAGCCCGCGGCGCTGAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS CAA 72 bp GCGGGCTCAGGGGCCCGGACATCGCGCAGGCGCCTCTaGCTGGCTCGCGCTCCCGCTAGCACTCTGCCTCGC +
Preference number: 6 (lower is better)
Translates to: AGSGARTSRRRL*LARAPASTLPR
Trigger: GCGAGGCAGAGTGCTAGCGGGAGCGCGAGCCAGCAAGAGGCGCCTGCGCGATGTCCGGGCCCCTGAGCCCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377482.10
ENST00000469499.5
ENST00000487559.1
CDS GCA 72 bp CGGGCTCAGGGGCCCGGACATCGCGCAGGCGCCTCTTaGTGGCTCGCGCTCCCGCTAGCACTCTGCCTCGCA +
Preference number: 6 (lower is better)
Translates to: RAQGPGHRAGAS*WLALPLALCLA
Trigger: TGCGAGGCAGAGTGCTAGCGGGAGCGCGAGCCAGCAAGAGGCGCCTGCGCGATGTCCGGGCCCCTGAGCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377482.10
ENST00000469499.5
ENST00000487559.1
CDS CCA 72 bp GTGGCTGAAGATATACCGCAGTCAGCAGGTAATGGCTaGATTTGGGCGCCTCCATTTGTTTCTTCTGCTTCC +
Preference number: 6 (lower is better)
Translates to: VAEDIPQSAGNG*IWAPPFVSSAS
Trigger: GGAAGCAGAAGAAACAAATGGAGGCGCCCAAATCCAGCCATTACCTGCTGACTGCGGTATATCTTCAGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS CCA 72 bp GAAGATATACCGCAGTCAGCAGGTAATGGCTGGATTTaGGCGCCTCCATTTGTTTCTTCTGCTTCCCTAAAA +
Preference number: 6 (lower is better)
Translates to: EDIPQSAGNGWI*APPFVSSASLK
Trigger: TTTTAGGGAAGCAGAAGAAACAAATGGAGGCGCCCAAATCCAGCCATTACCTGCTGACTGCGGTATATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377482.10
CDS CAA 72 bp TTTTCTGCAAAGCAGTGGCCATTCATCGGAGCAGATTaGGAAGCATGCCTTTTTAAACTCACTGCGACTGCT +
Preference number: 6 (lower is better)
Translates to: FSAKQWPFIGAD*EACLFKLTATA
Trigger: AGCAGTCGCAGTGAGTTTAAAAAGGCATGCTTCCAAATCTGCTCCGATGAATGGCCACTGCTTTGCAGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469499.5
CDS TCA 72 bp TGTAGAAATCCAGTTTTTAATGGGACTCTGATCTCCTaGGCAGCAACTCCTGCTATTGACATTGTGCCTTAT +
Preference number: 6 (lower is better)
Translates to: CRNPVFNGTLIS*AATPAIDIVPY
Trigger: ATAAGGCACAATGTCAATAGCAGGAGTTGCTGCTCAGGAGATCAGAGTCCCATTAAAAACTGGATTTCTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377482.10
ENST00000467067.1
ENST00000469499.5
ENST00000474874.5
ENST00000487559.1