RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ERN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000178607

Ensembl transcript IDs: ENST00000433197.4, ENST00000577567.5, ENST00000579249.1, ENST00000583077.1, ENST00000583896.1, ENST00000584041.1, ENST00000606895.2, ENST00000680433.1, ENST00000680493.1, ENST00000680625.1

Found 1222 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGCCGCGCTGGCTTGGGAGGCTCTTCGGGCGGCCGACGCCTCGGTaGGGCCGCGACTCCCGTCAGGGAAGCTCTCCCGGCCCGGTGCCG +
Preference number: 1 (lower is better)
Translates to: QPRWLGRLFGRPTPR*GRDSRQGSSPGPVP
Trigger: CGGCACCGGGCCGGGAGAGCTTCCCTGACGGGAGTCGCGGCCCCACCGAGGCGTCGGCCGCCCGAAGAGCCTCCCAAGCCAGCGCGGCTG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR TCA 90 bp ACGAAGTTGCGCCCGAGCCCGCGGGGTCCGGGGAGCCGCTGCCCGTaGCAGCCGCGCTGGCTTGGGAGGCTCTTCGGGCGGCCGACGCCT +
Preference number: 1 (lower is better)
Translates to: TKLRPSPRGPGSRCP*QPRWLGRLFGRPTP
Trigger: AGGCGTCGGCCGCCCGAAGAGCCTCCCAAGCCAGCGCGGCTGTCACGGGCAGCGGCTCCCCGGACCCCGCGGGCTCGGGCGCAACTTCGT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR CCA 90 bp GAGGAGGGTCCCGCAGGTGGGCGGCCTCCTCAGGCCGGGGCCTTCTaGGACCCCCAAGTGCCGTGCAGGACGCCACGAAGTTGCGCCCGA +
Preference number: 1 (lower is better)
Translates to: EEGPAGGRPPQAGAF*DPQVPCRTPRSCAR
Trigger: TCGGGCGCAACTTCGTGGCGTCCTGCACGGCACTTGGGGGTCCCAGAAGGCCCCGGCCTGAGGAGGCCGCCCACCTGCGGGACCCTCCTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR GCA 90 bp CTGGGGGCTCGTGGAAGTAGTAGGGCTGGAAGAGTCTCTCGTGGCTaGACAGCTCCATGGCCCGGTAGGTGTGTGCGAGGAGGTGGGGGA +
Preference number: 1 (lower is better)
Translates to: LGARGSSRAGRVSRG*TAPWPGRCVRGGGG
Trigger: TCCCCCACCTCCTCGCACACACCTACCGGGCCATGGAGCTGTGCAGCCACGAGAGACTCTTCCAGCCCTACTACTTCCACGAGCCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR CCA 90 bp ACTCTTTACCTCTTGCCCCAGGCGCTCCTGAGCACCACCCCGAGATaGCCCGGGACACACCCACCAAAGGCCACTGTTCTGGCCACTGGC +
Preference number: 1 (lower is better)
Translates to: TLYLLPQALLSTTPR*PGTHPPKATVLATG
Trigger: GCCAGTGGCCAGAACAGTGGCCTTTGGTGGGTGTGTCCCGGGCCATCTCGGGGTGGTGCTCAGGAGCGCCTGGGGCAAGAGGTAAAGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR TCA 90 bp TCCTTGAAGGCCAGGGAACTCTTTACCTCTTGCCCCAGGCGCTCCTaGGCACCACCCCGAGATGGCCCGGGACACACCCACCAAAGGCCA +
Preference number: 1 (lower is better)
Translates to: SLKARELFTSCPRRS*APPRDGPGHTHQRP
Trigger: TGGCCTTTGGTGGGTGTGTCCCGGGCCATCTCGGGGTGGTGCTCAGGAGCGCCTGGGGCAAGAGGTAAAGAGTTCCCTGGCCTTCAAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR CCA 90 bp GAGGCATCAAGCTCTAATTGTGGTGACCAGGCCCTCAGTCACAGCTaGGGCCACCAGAACAGAGGGGCCGCCCTCGCTCAGAGGGCGTCT +
Preference number: 1 (lower is better)
Translates to: EASSSNCGDQALSHS*GHQNRGAALAQRAS
Trigger: AGACGCCCTCTGAGCGAGGGCGGCCCCTCTGTTCTGGTGGCCCCAGCTGTGACTGAGGGCCTGGTCACCACAATTAGAGCTTGATGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR TCA 90 bp CTGGTCCTGAAGGCTGGCCCCTGTCTGGGTCTTCGCTGCTCTCCTTaGAGGCCAGGGAACTCTTTACCTCTTGCCCCAGGCGCTCCTGAG +
Preference number: 1 (lower is better)
Translates to: LVLKAGPCLGLRCSP*RPGNSLPLAPGAPE
Trigger: CTCAGGAGCGCCTGGGGCAAGAGGTAAAGAGTTCCCTGGCCTTCAAGGAGAGCAGCGAAGACCCAGACAGGGGCCAGCCTTCAGGACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR CCA 90 bp GCAGCCGTATGGGGAGCTCTGTCTCAGGCCACCTGGCATGCGGCATaGGAGCAGCAGGAAATGCGGTCTGGCCACGTTTCTGAACAACGC +
Preference number: 1 (lower is better)
Translates to: AAVWGALSQATWHAA*EQQEMRSGHVSEQR
Trigger: GCGTTGTTCAGAAACGTGGCCAGACCGCATTTCCTGCTGCTCCCATGCCGCATGCCAGGTGGCCTGAGACAGAGCTCCCCATACGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR CCA 90 bp GTAAAGCACCTTGCAGCCGTATGGGGAGCTCTGTCTCAGGCCACCTaGCATGCGGCATGGGAGCAGCAGGAAATGCGGTCTGGCCACGTT +
Preference number: 1 (lower is better)
Translates to: VKHLAAVWGALSQAT*HAAWEQQEMRSGHV
Trigger: AACGTGGCCAGACCGCATTTCCTGCTGCTCCCATGCCGCATGCCAGGTGGCCTGAGACAGAGCTCCCCATACGGCTGCAAGGTGCTTTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR TCA 90 bp GGACCTGGAGACACTCCTGGCCACCTCAGGAGGAGTAAAGTCGCCTaGGATTGGAGTGTCCGTCCCAGTGGGGTCCCCGCATTTGAGGTA +
Preference number: 1 (lower is better)
Translates to: GPGDTPGHLRRSKVA*DWSVRPSGVPAFEV
Trigger: TACCTCAAATGCGGGGACCCCACTGGGACGGACACTCCAATCTCAGGCGACTTTACTCCTCCTGAGGTGGCCAGGAGTGTCTCCAGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR CCA 90 bp TTGGGTTACTGCCAAAGCCCACAGGTAAAGCACCTTGCAGCCGTATaGGGAGCTCTGTCTCAGGCCACCTGGCATGCGGCATGGGAGCAG +
Preference number: 1 (lower is better)
Translates to: LGYCQSPQVKHLAAV*GALSQATWHAAWEQ
Trigger: CTGCTCCCATGCCGCATGCCAGGTGGCCTGAGACAGAGCTCCCCATACGGCTGCAAGGTGCTTTACCTGTGGGCTTTGGCAGTAACCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR CCA 90 bp GTGGGCTGCAGAGCAGGCAGCTCAAGGCACTTGGTTTGGGAAGCCTaGTCTCCCTGCAAAGCCGGGAGGCATCAAGCTCTAATTGTGGTG +
Preference number: 1 (lower is better)
Translates to: VGCRAGSSRHLVWEA*SPCKAGRHQALIVV
Trigger: CACCACAATTAGAGCTTGATGCCTCCCGGCTTTGCAGGGAGACCAGGCTTCCCAAACCAAGTGCCTTGAGCTGCCTGCTCTGCAGCCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR CCA 90 bp GGCGCTGGGCTTCTCTTCCAGCACAGAAGGCTGCAAAAGTGGAACTaGCCCCCAGTTCCCAGAGGATCACAAGGCCAAGGATCCAATGGG +
Preference number: 1 (lower is better)
Translates to: GAGLLFQHRRLQKWN*PPVPRGSQGQGSNG
Trigger: CCCATTGGATCCTTGGCCTTGTGATCCTCTGGGAACTGGGGGCCAGTTCCACTTTTGCAGCCTTCTGTGCTGGAAGAGAAGCCCAGCGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR CCA 90 bp TCCACACCTAGGCATGGGAGCAGATCCTCCCATCCAACCCAAGGGTaGTATCCCCCTGAACCCCACCTGGTGATCACACCCAGGTCAGAA +
Preference number: 1 (lower is better)
Translates to: STPRHGSRSSHPTQG*YPPEPHLVITPRSE
Trigger: TTCTGACCTGGGTGTGATCACCAGGTGGGGTTCAGGGGGATACCACCCTTGGGTTGGATGGGAGGATCTGCTCCCATGCCTAGGTGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR TCA 90 bp CCCCAGGTGCTCTCCCACGAGGAGACAGTCTTTCATTTGAGGTTCTaGAGCGGCCTCACCTCGAACCCATGCGGGATCTTCCAAGAGTGC +
Preference number: 1 (lower is better)
Translates to: PQVLSHEETVFHLRF*SGLTSNPCGIFQEC
Trigger: GCACTCTTGGAAGATCCCGCATGGGTTCGAGGTGAGGCCGCTTCAGAACCTCAAATGAAAGACTGTCTCCTCGTGGGAGAGCACCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR TCA 90 bp TCTGATGGCCCCAGGTGCTCTCCCACGAGGAGACAGTCTTTCATTTaGGGTTCTGAAGCGGCCTCACCTCGAACCCATGCGGGATCTTCC +
Preference number: 1 (lower is better)
Translates to: SDGPRCSPTRRQSFI*GSEAASPRTHAGSS
Trigger: GGAAGATCCCGCATGGGTTCGAGGTGAGGCCGCTTCAGAACCTCAAATGAAAGACTGTCTCCTCGTGGGAGAGCACCTGGGGCCATCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR TCA 90 bp GCATGGGAGCAGATCCTCCCATCCAACCCAAGGGTGGTATCCCCCTaGACCCCACCTGGTGATCACACCCAGGTCAGAAATGACCACCTA +
Preference number: 1 (lower is better)
Translates to: AWEQILPSNPRVVSP*TPPGDHTQVRNDHL
Trigger: TAGGTGGTCATTTCTGACCTGGGTGTGATCACCAGGTGGGGTTCAGGGGGATACCACCCTTGGGTTGGATGGGAGGATCTGCTCCCATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR GCA 90 bp ACAGCTCCACTTGCTCAAGGAAGTCTCGGTGCACAGAAGGAAGCCTaGAGCCTCCCAGTACCAAGAAACCGGCAGGGCAAGTGGCAGAAG +
Preference number: 1 (lower is better)
Translates to: TAPLAQGSLGAQKEA*SLPVPRNRQGKWQK
Trigger: CTTCTGCCACTTGCCCTGCCGGTTTCTTGGTACTGGGAGGCTGCAGGCTTCCTTCTGTGCACCGAGACTTCCTTGAGCAAGTGGAGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR GCA 90 bp CATGAGGGACATGGGCCGCAGAGCACTGCTTCCCGGAGCTTCACCTaGACCTACGTCCCTGAAGGGAAAATCAGCGTAAGAGAGGCAACA +
Preference number: 1 (lower is better)
Translates to: HEGHGPQSTASRSFT*TYVPEGKISVREAT
Trigger: TGTTGCCTCTCTTACGCTGATTTTCCCTTCAGGGACGTAGGTGCAGGTGAAGCTCCGGGAAGCAGTGCTCTGCGGCCCATGTCCCTCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR GCA 90 bp CCTCTACCTGGAAACGCTAAGCTCCTGCTAAACGGGATAAGCTCCTaGACCCTAGACCTGCTGCCTCCTTCGCTCTTCTCCAGGCCTCAC +
Preference number: 1 (lower is better)
Translates to: PLPGNAKLLLNGISS*TLDLLPPSLFSRPH
Trigger: GTGAGGCCTGGAGAAGAGCGAAGGAGGCAGCAGGTCTAGGGTGCAGGAGCTTATCCCGTTTAGCAGGAGCTTAGCGTTTCCAGGTAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR CCA 90 bp GCTGGGCTGGGGGCACTCCCTGTGGCAGGCCTGTTAAATCACTCGTaGCACCTTCTCCACCTTCTGATCCTCTCTTGGGTTACTGCCAAA +
Preference number: 1 (lower is better)
Translates to: AGLGALPVAGLLNHS*HLLHLLILSWVTAK
Trigger: TTTGGCAGTAACCCAAGAGAGGATCAGAAGGTGGAGAAGGTGCCACGAGTGATTTAACAGGCCTGCCACAGGGAGTGCCCCCAGCCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR TCA 90 bp GAACAACAGGGCATGTTGCTCCTTGCCTCAGGTTCCTCCAACGGCTaGGGAAAAGCCAATGTCCTCACACCAGCCACTAGGCCCTACACC +
Preference number: 1 (lower is better)
Translates to: EQQGMLLLASGSSNG*GKANVLTPATRPYT
Trigger: GGTGTAGGGCCTAGTGGCTGGTGTGAGGACATTGGCTTTTCCTCAGCCGTTGGAGGAACCTGAGGCAAGGAGCAACATGCCCTGTTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR GCA 90 bp AACCCATGCGGGATCTTCCAAGAGTGCAATTCCCACAGCTCCACTTaGTCAAGGAAGTCTCGGTGCACAGAAGGAAGCCTGCAGCCTCCC +
Preference number: 1 (lower is better)
Translates to: NPCGIFQECNSHSST*SRKSRCTEGSLQPP
Trigger: GGGAGGCTGCAGGCTTCCTTCTGTGCACCGAGACTTCCTTGAGCAAGTGGAGCTGTGGGAATTGCACTCTTGGAAGATCCCGCATGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR CCA 90 bp ATCACCTGGGTACTCCCAAAGAGAAAACCTGTGCTGAGAACGAGCTaGGCTGGGGGCACTCCCTGTGGCAGGCCTGTTAAATCACTCGTG +
Preference number: 1 (lower is better)
Translates to: ITWVLPKRKPVLRTS*AGGTPCGRPVKSLV
Trigger: CACGAGTGATTTAACAGGCCTGCCACAGGGAGTGCCCCCAGCCCAGCTCGTTCTCAGCACAGGTTTTCTCTTTGGGAGTACCCAGGTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR CCA 90 bp GAACTGGCCCCCAGTTCCCAGAGGATCACAAGGCCAAGGATCCAATaGGCACACCATGAGGACCCAAGGAAAGGACAGAGAAAGGAACGG +
Preference number: 1 (lower is better)
Translates to: ELAPSSQRITRPRIQ*AHHEDPRKGQRKER
Trigger: CCGTTCCTTTCTCTGTCCTTTCCTTGGGTCCTCATGGTGTGCCCATTGGATCCTTGGCCTTGTGATCCTCTGGGAACTGGGGGCCAGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR GCA 90 bp AGCAGGAAATGCGGTCTGGCCACGTTTCTGAACAACGCACAGCCTTaGTTAGAAGACGCCAAGGACACCGACCAAGGGCCAAGGTTCCAA +
Preference number: 1 (lower is better)
Translates to: SRKCGLATFLNNAQP*LEDAKDTDQGPRFQ
Trigger: TTGGAACCTTGGCCCTTGGTCGGTGTCCTTGGCGTCTTCTAAGCAAGGCTGTGCGTTGTTCAGAAACGTGGCCAGACCGCATTTCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR GCA 90 bp TCACTCGTGGCACCTTCTCCACCTTCTGATCCTCTCTTGGGTTACTaGCAAAGCCCACAGGTAAAGCACCTTGCAGCCGTATGGGGAGCT +
Preference number: 1 (lower is better)
Translates to: SLVAPSPPSDPLLGY*QSPQVKHLAAVWGA
Trigger: AGCTCCCCATACGGCTGCAAGGTGCTTTACCTGTGGGCTTTGGCAGTAACCCAAGAGAGGATCAGAAGGTGGAGAAGGTGCCACGAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR TCA 90 bp AGGCGACTAAGAGGAAAGACCAGAGGTGACCGGACCAGATCCCTGTaGTTCTGGGACAGAAGAGATGTAAACCGCAAACACGCGCCCTTC +
Preference number: 1 (lower is better)
Translates to: RRLRGKTRGDRTRSL*FWDRRDVNRKHAPF
Trigger: GAAGGGCGCGTGTTTGCGGTTTACATCTCTTCTGTCCCAGAATCACAGGGATCTGGTCCGGTCACCTCTGGTCTTTCCTCTTAGTCGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR TCA 90 bp CAGTTCCCAGAGGATCACAAGGCCAAGGATCCAATGGGCACACCATaGGGACCCAAGGAAAGGACAGAGAAAGGAACGGCTCTGGGAAAG +
Preference number: 1 (lower is better)
Translates to: QFPEDHKAKDPMGTP*GPKERTEKGTALGK
Trigger: CTTTCCCAGAGCCGTTCCTTTCTCTGTCCTTTCCTTGGGTCCTCATGGTGTGCCCATTGGATCCTTGGCCTTGTGATCCTCTGGGAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR TCA 90 bp GTACCAAGAAACCGGCAGGGCAAGTGGCAGAAGCCAGCTCTCGGGTaGGAGTCCTTACTCCCTGTTGCATTCGTTCCCCAAAGTTTTCGA +
Preference number: 1 (lower is better)
Translates to: VPRNRQGKWQKPALG*ESLLPVAFVPQSFR
Trigger: TCGAAAACTTTGGGGAACGAATGCAACAGGGAGTAAGGACTCTCACCCGAGAGCTGGCTTCTGCCACTTGCCCTGCCGGTTTCTTGGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR TCA 90 bp ACCCTAGACCTGCTGCCTCCTTCGCTCTTCTCCAGGCCTCACTCCTaGCTGAACTCAATTCATTCACCAGGGTTTACCTCTGACACCCCA +
Preference number: 1 (lower is better)
Translates to: TLDLLPPSLFSRPHS*LNSIHSPGFTSDTP
Trigger: TGGGGTGTCAGAGGTAAACCCTGGTGAATGAATTGAGTTCAGTCAGGAGTGAGGCCTGGAGAAGAGCGAAGGAGGCAGCAGGTCTAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR TCA 90 bp CGGGAACCAGGGCTCCTAAAGGCGACTAAGAGGAAAGACCAGAGGTaGCCGGACCAGATCCCTGTGATTCTGGGACAGAAGAGATGTAAA +
Preference number: 1 (lower is better)
Translates to: REPGLLKATKRKDQR*PDQIPVILGQKRCK
Trigger: TTTACATCTCTTCTGTCCCAGAATCACAGGGATCTGGTCCGGTCACCTCTGGTCTTTCCTCTTAGTCGCCTTTAGGAGCCCTGGTTCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR TCA 90 bp GCCTCACTCCTGACTGAACTCAATTCATTCACCAGGGTTTACCTCTaGCACCCCACTTCACAGAGCCTCCTGCCCTCCAAATGGATGTGG +
Preference number: 1 (lower is better)
Translates to: ASLLTELNSFTRVYL*HPTSQSLLPSKWMW
Trigger: CCACATCCATTTGGAGGGCAGGAGGCTCTGTGAAGTGGGGTGTCAGAGGTAAACCCTGGTGAATGAATTGAGTTCAGTCAGGAGTGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR TCA 90 bp AAAACAATTCATGGGGTCCTGGGATTAGGGAGTTGGACTGAAAGGTaGGGTCACTCCACACCTAGGCATGGGAGCAGATCCTCCCATCCA +
Preference number: 1 (lower is better)
Translates to: KTIHGVLGLGSWTER*GHSTPRHGSRSSHP
Trigger: TGGATGGGAGGATCTGCTCCCATGCCTAGGTGTGGAGTGACCTCACCTTTCAGTCCAACTCCCTAATCCCAGGACCCCATGAATTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR CCA 90 bp TTAAAAGATGATGTCCAACCTGGGAGGGTGGAATTTCGGCTCACCTaGAGAGGATGCCTGATGACTTCCTGCCAGGAGAAGCCAAAGCCA +
Preference number: 1 (lower is better)
Translates to: LKDDVQPGRVEFRLT*RGCLMTSCQEKPKP
Trigger: TGGCTTTGGCTTCTCCTGGCAGGAAGTCATCAGGCATCCTCTCCAGGTGAGCCGAAATTCCACCCTCCCAGGTTGGACATCATCTTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR TCA 90 bp CTAGTTAACAGTGACCTGGGCTACTCTGGGCACATCTGTGATCAATaGGAAATCTCACACTGCAGGACGACACCCTCTGAACTCCGTCCT +
Preference number: 1 (lower is better)
Translates to: LVNSDLGYSGHICDQ*EISHCRTTPSELRP
Trigger: AGGACGGAGTTCAGAGGGTGTCGTCCTGCAGTGTGAGATTTCTCATTGATCACAGATGTGCCCAGAGTAGCCCAGGTCACTGTTAACTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR TCA 90 bp AGTCGCCTGAGATTGGAGTGTCCGTCCCAGTGGGGTCCCCGCATTTaGGGTATGTTTATACATGTTTACACACAGTGGCTGCATCAGACA +
Preference number: 1 (lower is better)
Translates to: SRLRLECPSQWGPRI*GMFIHVYTQWLHQT
Trigger: TGTCTGATGCAGCCACTGTGTGTAAACATGTATAAACATACCTCAAATGCGGGGACCCCACTGGGACGGACACTCCAATCTCAGGCGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR GCA 90 bp CCGTCCTGGAAATCCAGTTGCCGTGGCTATGGTGGTAAACTATCCTaGACTTGTCTCCATCTGCATCAACAGGCACAGCATTTGTTCCTG +
Preference number: 1 (lower is better)
Translates to: PSWKSSCRGYGGKLS*TCLHLHQQAQHLFL
Trigger: CAGGAACAAATGCTGTGCCTGTTGATGCAGATGGAGACAAGTGCAGGATAGTTTACCACCATAGCCACGGCAACTGGATTTCCAGGACGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR CCA 90 bp TCTCTGAGTTCACCAGGCCTGAGCTGCAATGATCCCCCAACTGGCTaGAGAAAGTACATGGACAACATCTCCTTACACGGTAGGCTGATT +
Preference number: 1 (lower is better)
Translates to: SLSSPGLSCNDPPTG*RKYMDNISLHGRLI
Trigger: AATCAGCCTACCGTGTAAGGAGATGTTGTCCATGTACTTTCTCCAGCCAGTTGGGGGATCATTGCAGCTCAGGCCTGGTGAACTCAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR CCA 90 bp CCTGCACTTGTCTCCATCTGCATCAACAGGCACAGCATTTGTTCCTaGGGGGAGTGTCAGCGTGTGTCCGAGCATTTACATGCTATATCT +
Preference number: 1 (lower is better)
Translates to: PALVSICINRHSICS*GECQRVSEHLHAIS
Trigger: AGATATAGCATGTAAATGCTCGGACACACGCTGACACTCCCCCCAGGAACAAATGCTGTGCCTGTTGATGCAGATGGAGACAAGTGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR CCA 90 bp CCAAGGAAAGGACAGAGAAAGGAACGGCTCTGGGAAAGCCAAACCTaGCCAAAGTCCAACTTCCTGAAAAGAAAGCAGCCAAGAGGAGAA +
Preference number: 1 (lower is better)
Translates to: PRKGQRKERLWESQT*PKSNFLKRKQPRGE
Trigger: TTCTCCTCTTGGCTGCTTTCTTTTCAGGAAGTTGGACTTTGGCCAGGTTTGGCTTTCCCAGAGCCGTTCCTTTCTCTGTCCTTTCCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR TCA 90 bp TTCATGATTATCTCCCAAAGGCCCCATCTCAAAGTACCATCACACTaGGGGCCAGGGCTTCAGCTTATGAATGGCAGTGGAAGGATGACA +
Preference number: 1 (lower is better)
Translates to: FMIISQRPHLKVPSH*GPGLQLMNGSGRMT
Trigger: TGTCATCCTTCCACTGCCATTCATAAGCTGAAGCCCTGGCCCTCAGTGTGATGGTACTTTGAGATGGGGCCTTTGGGAGATAATCATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR GCA 90 bp CTTTGGCCAAAGTGTTGGTTAAGGCTGCTCCAGTGGGAGGCTCACTaGAGTCACGTTCTTTGTGGCTTTCCAACGTCTACAGAAAGAATT +
Preference number: 1 (lower is better)
Translates to: LWPKCWLRLLQWEAH*SHVLCGFPTSTERI
Trigger: AATTCTTTCTGTAGACGTTGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCTTAACCAACACTTTGGCCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR CCA 90 bp AAACAGCTAAGCCGCAACACGATATGTGATGGTGCAGAGCTGTTCTaGCCTGAAAAGAACTTTCCACTTGCTGAGCACAGTGGGAAACCA +
Preference number: 1 (lower is better)
Translates to: KQLSRNTICDGAELF*PEKNFPLAEHSGKP
Trigger: TGGTTTCCCACTGTGCTCAGCAAGTGGAAAGTTCTTTTCAGGCCAGAACAGCTCTGCACCATCACATATCGTGTTGCGGCTTAGCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR CCA 90 bp GTTAAGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTaGCTTTCCAACGTCTACAGAAAGAATTTAAGCGCCGGTACAAAA +
Preference number: 1 (lower is better)
Translates to: VKAAPVGGSLQSRSL*LSNVYRKNLSAGTK
Trigger: TTTTGTACCGGCGCTTAAATTCTTTCTGTAGACGTTGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCTTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR TCA 90 bp ATGAATGTAAACCAGGCCCTATCATTCGTCTCCTCCAGAAAAAGATaGAAAGACATTTCTGATGGCCCCAGGTGCTCTCCCACGAGGAGA +
Preference number: 1 (lower is better)
Translates to: MNVNQALSFVSSRKR*KDISDGPRCSPTRR
Trigger: TCTCCTCGTGGGAGAGCACCTGGGGCCATCAGAAATGTCTTTTCATCTTTTTCTGGAGGAGACGAATGATAGGGCCTGGTTTACATTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR TCA 90 bp ACCTGTAATAAAACACTCTACAGTCTTCCTGTGGCCACACACTCCTaGGAGAGCTGGTCTTTGGGCTGCTTAAAGTTCCTGCTGATCCAA +
Preference number: 1 (lower is better)
Translates to: TCNKTLYSLPVATHS*ESWSLGCLKFLLIQ
Trigger: TTGGATCAGCAGGAACTTTAAGCAGCCCAAAGACCAGCTCTCTCAGGAGTGTGTGGCCACAGGAAGACTGTAGAGTGTTTTATTACAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR CCA 90 bp ATTAAGCAGGAATTTAAAAAGTCTGAAGCAAGTTTATCCAGTAGATaGCTGGGGGTGCTACTCGCGCTGTCTCTGAGGCCCTCCTTTGCA +
Preference number: 1 (lower is better)
Translates to: IKQEFKKSEASLSSR*LGVLLALSLRPSFA
Trigger: TGCAAAGGAGGGCCTCAGAGACAGCGCGAGTAGCACCCCCAGCCATCTACTGGATAAACTTGCTTCAGACTTTTTAAATTCCTGCTTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR CCA 90 bp AGTACCATCACACTGAGGGCCAGGGCTTCAGCTTATGAATGGCAGTaGAAGGATGACACAAATATTCAGTCCAGAACAACAGGGCATGTT +
Preference number: 1 (lower is better)
Translates to: STITLRARASAYEWQ*KDDTNIQSRTTGHV
Trigger: AACATGCCCTGTTGTTCTGGACTGAATATTTGTGTCATCCTTCCACTGCCATTCATAAGCTGAAGCCCTGGCCCTCAGTGTGATGGTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR CCA 90 bp TCTCAAAGTACCATCACACTGAGGGCCAGGGCTTCAGCTTATGAATaGCAGTGGAAGGATGACACAAATATTCAGTCCAGAACAACAGGG +
Preference number: 1 (lower is better)
Translates to: SQSTITLRARASAYE*QWKDDTNIQSRTTG
Trigger: CCCTGTTGTTCTGGACTGAATATTTGTGTCATCCTTCCACTGCCATTCATAAGCTGAAGCCCTGGCCCTCAGTGTGATGGTACTTTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR TCA 90 bp GTCCCAGCACGCAAGCAAAATGTACGATTCCCTCCTCTCCCTTCCTaGAAGGCCTGTAGACTGACATTAAGCAGGAATTTAAAAAGTCTG +
Preference number: 1 (lower is better)
Translates to: VPARKQNVRFPPLPS*KACRLTLSRNLKSL
Trigger: CAGACTTTTTAAATTCCTGCTTAATGTCAGTCTACAGGCCTTTCAGGAAGGGAGAGGAGGGAATCGTACATTTTGCTTGCGTGCTGGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR TCA 90 bp TTAATACTGAATGGAATCTCTGAGTTCACCAGGCCTGAGCTGCAATaGTCCCCCAACTGGCTGGAGAAAGTACATGGACAACATCTCCTT +
Preference number: 1 (lower is better)
Translates to: LILNGISEFTRPELQ*SPNWLEKVHGQHLL
Trigger: AAGGAGATGTTGTCCATGTACTTTCTCCAGCCAGTTGGGGGATCATTGCAGCTCAGGCCTGGTGAACTCAGAGATTCCATTCAGTATTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR TCA 90 bp CCTTCGTTTGTGAACAGATGCCAGGCAGTAGTTACCAATCCAAGGTaGGGTGCTCAAGTTCAAAACCTGACCTTAGTTGTAAAAGTGGGG +
Preference number: 1 (lower is better)
Translates to: PSFVNRCQAVVTNPR*GAQVQNLTLVVKVG
Trigger: CCCCACTTTTACAACTAAGGTCAGGTTTTGAACTTGAGCACCTCACCTTGGATTGGTAACTACTGCCTGGCATCTGTTCACAAACGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR CCA 90 bp CAAATGGATGTGGGCTCACAGCACATTACTAGTCCCTCTCATGAGTaGTTACAGGACTCGGCTGTGTTGAAGTCCTGTGTTCTCATATTT +
Preference number: 1 (lower is better)
Translates to: QMDVGSQHITSPSHE*LQDSAVLKSCVLIF
Trigger: AAATATGAGAACACAGGACTTCAACACAGCCGAGTCCTGTAACCACTCATGAGAGGGACTAGTAATGTGCTGTGAGCCCACATCCATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR GCA 90 bp AACTCTGATAAGGCCCTTTCTTCTAGAGTTGGTGGGAAGAAACTCTaGTGGATCTACTCACCTGCAGATCTTCCAGAACATCTATCTGTA +
Preference number: 1 (lower is better)
Translates to: NSDKALSSRVGGKKL*WIYSPADLPEHLSV
Trigger: TACAGATAGATGTTCTGGAAGATCTGCAGGTGAGTAGATCCAGCAGAGTTTCTTCCCACCAACTCTAGAAGAAAGGGCCTTATCAGAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR CCA 90 bp TCTGATAAGGCCCTTTCTTCTAGAGTTGGTGGGAAGAAACTCTGCTaGATCTACTCACCTGCAGATCTTCCAGAACATCTATCTGTAACT +
Preference number: 1 (lower is better)
Translates to: SDKALSSRVGGKKLC*IYSPADLPEHLSVT
Trigger: AGTTACAGATAGATGTTCTGGAAGATCTGCAGGTGAGTAGATCCAGCAGAGTTTCTTCCCACCAACTCTAGAAGAAAGGGCCTTATCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR TCA 90 bp GTAACCCAGCTGCCATCATCTATGGATGGTAACGAGGTTTGCTGCTaGATTCACAAGACAATGTGTGACCTTCTGACATATGCCAATATT +
Preference number: 1 (lower is better)
Translates to: VTQLPSSMDGNEVCC*IHKTMCDLLTYANI
Trigger: AATATTGGCATATGTCAGAAGGTCACACATTGTCTTGTGAATTCAGCAGCAAACCTCGTTACCATCCATAGATGATGGCAGCTGGGTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR CCA 90 bp GGGCTTGACTCTGCTAGTTACCACCAGGAAGATCAGATCATAACATaGACGCATGGTATGTTAAGTAAGAAAGAAGCTCAGTCTTTATTC +
Preference number: 1 (lower is better)
Translates to: GLDSASYHQEDQIIT*THGMLSKKEAQSLF
Trigger: GAATAAAGACTGAGCTTCTTTCTTACTTAACATACCATGCGTCCATGTTATGATCTGATCTTCCTGGTGGTAACTAGCAGAGTCAAGCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR TCA 90 bp GTAACGAGGTTTGCTGCTGAATTCACAAGACAATGTGTGACCTTCTaGCATATGCCAATATTTTTCCATCTAGCATACTGTTTTGGAACA +
Preference number: 1 (lower is better)
Translates to: VTRFAAEFTRQCVTF*HMPIFFHLAYCFGT
Trigger: TGTTCCAAAACAGTATGCTAGATGGAAAAATATTGGCATATGTCAGAAGGTCACACATTGTCTTGTGAATTCAGCAGCAAACCTCGTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR TCA 90 bp GTGGCAAAGGAAACCATTATACACCTATCCCTTGACGTTATGAAATaGTCGAATTCATGTCAAACATTTGGTCATTCTGCTTATACCTTC +
Preference number: 1 (lower is better)
Translates to: VAKETIIHLSLDVMK*SNSCQTFGHSAYTF
Trigger: GAAGGTATAAGCAGAATGACCAAATGTTTGACATGAATTCGATCATTTCATAACGTCAAGGGATAGGTGTATAATGGTTTCCTTTGCCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR TCA 90 bp AGATGGGACTGTCTAGTTGCAGGAAAAGAAGCTCAGGGCTCCTACTaGTTCTACATTATGGTGAGTTGTATAATTATTTCATTCTACATT +
Preference number: 1 (lower is better)
Translates to: RWDCLVAGKEAQGSY*FYIMVSCIIISFYI
Trigger: AATGTAGAATGAAATAATTATACAACTCACCATAATGTAGAATCAGTAGGAGCCCTGAGCTTCTTTTCCTGCAACTAGACAGTCCCATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR CCA 90 bp AGTCTTTATTCCCCTCACCATAACAACCCAATAAAGTGGTTAACTTaGATGAATGTCAAATCTTACAGCCCTCTATTATTTCAGCCTCTA +
Preference number: 1 (lower is better)
Translates to: SLYSPHHNNPIKWLT*MNVKSYSPLLFQPL
Trigger: TAGAGGCTGAAATAATAGAGGGCTGTAAGATTTGACATTCATCCAAGTTAACCACTTTATTGGGTTGTTATGGTGAGGGGAATAAAGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR TCA 90 bp CAAAAGGAAAGATGTGGCAAAGGAAACCATTATACACCTATCCCTTaGCGTTATGAAATGATCGAATTCATGTCAAACATTTGGTCATTC +
Preference number: 1 (lower is better)
Translates to: QKERCGKGNHYTPIP*RYEMIEFMSNIWSF
Trigger: GAATGACCAAATGTTTGACATGAATTCGATCATTTCATAACGTCAAGGGATAGGTGTATAATGGTTTCCTTTGCCACATCTTTCCTTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR CCA 90 bp AAGAAGCTCAGTCTTTATTCCCCTCACCATAACAACCCAATAAAGTaGTTAACTTGGATGAATGTCAAATCTTACAGCCCTCTATTATTT +
Preference number: 1 (lower is better)
Translates to: KKLSLYSPHHNNPIK*LTWMNVKSYSPLLF
Trigger: AAATAATAGAGGGCTGTAAGATTTGACATTCATCCAAGTTAACCACTTTATTGGGTTGTTATGGTGAGGGGAATAAAGACTGAGCTTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR TCA 90 bp AAGATGTGGCAAAGGAAACCATTATACACCTATCCCTTGACGTTATaGAATGATCGAATTCATGTCAAACATTTGGTCATTCTGCTTATA +
Preference number: 1 (lower is better)
Translates to: KMWQRKPLYTYPLTL*NDRIHVKHLVILLI
Trigger: TATAAGCAGAATGACCAAATGTTTGACATGAATTCGATCATTTCATAACGTCAAGGGATAGGTGTATAATGGTTTCCTTTGCCACATCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR-3UTR TCA 90 bp GGCCGGGGCCTTCTGGGACCCCCAAGTGCCGTGCAGGACGCCACGAAGTTGCGCGGGAGCCGCTGCCCGTaGCAGCCGCGCTGGCTTGGG +
Preference number: 2 (lower is better)
Translates to: GRGLLGPPSAVQDATKLRGSRCP*QPRWLG
Trigger: CCCAAGCCAGCGCGGCTGTCACGGGCAGCGGCTCCC...GCGCAACTTCGTGGCGTCCTGCACGGCACTTGGGGGTCCCAGAAGGCCCCGGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR-3UTR TCA 90 bp CTCTGTCTCAGGCCACCTGGCATGCGGCATGGGAGCAGCAGGAAATGCGGTCTGTGCCCCAGGCGCTCCTaGGCACCACCCCGAGATGGC +
Preference number: 2 (lower is better)
Translates to: LCLRPPGMRHGSSRKCGLCPRRS*APPRDG
Trigger: GCCATCTCGGGGTGGTGCTCAGGAGCGCCTGGGGCA...CAGACCGCATTTCCTGCTGCTCCCATGCCGCATGCCAGGTGGCCTGAGACAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CCA 90 bp CAGAACAGAGGGGCCGCCCTCGCTCAGAGGGCGTCTGGAGTCACTGGGGGCTGGTGGAAGAGTCTCTCGTaGCTGCACAGCTCCATGGCC +
Preference number: 2 (lower is better)
Translates to: QNRGAALAQRASGVTGGWWKSLS*LHSSMA
Trigger: GGCCATGGAGCTGTGCAGCCACGAGAGACTCTTCCA...CCAGCCCCCAGTGACTCCAGACGCCCTCTGAGCGAGGGCGGCCCCTCTGTTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR-3UTR GCA 90 bp CTCTGTCTCAGGCCACCTGGCATGCGGCATGGGAGCAGCAGGAAATGCGGTCTGCTGTCCTCTGTGGGCTaGAGAGCAGGCAGCTCAAGG +
Preference number: 2 (lower is better)
Translates to: LCLRPPGMRHGSSRKCGLLSSVG*RAGSSR
Trigger: CCTTGAGCTGCCTGCTCTGCAGCCCACAGAGGACAG...CAGACCGCATTTCCTGCTGCTCCCATGCCGCATGCCAGGTGGCCTGAGACAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CCA 90 bp CTCTGTCTCAGGCCACCTGGCATGCGGCATGGGAGCAGCAGGAAATGCGGTCTGCAGCACTGTCCTCTGTaGGCTGCAGAGCAGGCAGCT +
Preference number: 2 (lower is better)
Translates to: LCLRPPGMRHGSSRKCGLQHCPL*AAEQAA
Trigger: AGCTGCCTGCTCTGCAGCCCACAGAGGACAGTGCTG...CAGACCGCATTTCCTGCTGCTCCCATGCCGCATGCCAGGTGGCCTGAGACAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR TCA 90 bp CTCTGTCTCAGGCCACCTGGCATGCGGCATGGGAGCAGCAGGAAATGCGGTCTGTACTCGCGCTGTCTCTaGGGCCCTCCTTTGCAGACA +
Preference number: 2 (lower is better)
Translates to: LCLRPPGMRHGSSRKCGLYSRCL*GPPLQT
Trigger: TGTCTGCAAAGGAGGGCCTCAGAGACAGCGCGAGTA...CAGACCGCATTTCCTGCTGCTCCCATGCCGCATGCCAGGTGGCCTGAGACAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CCA 90 bp ACCCATGCGGGATCTTCCAAGAGTGCAATTCCCACAGCTCCACTTGCTCAAGGAACAGCCGCGCTGGCTTaGGAGGCTCTTCGGGCGGCC +
Preference number: 2 (lower is better)
Translates to: THAGSSKSAIPTAPLAQGTAALA*EALRAA
Trigger: GGCCGCCCGAAGAGCCTCCCAAGCCAGCGCGGCTGT...TCCTTGAGCAAGTGGAGCTGTGGGAATTGCACTCTTGGAAGATCCCGCATGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR-3UTR CCA 90 bp CCTCCCGCCACATCAACTCTGTGCTCCTCCTCTACCGTGCCAGGGACACTCCCACTGTGGATGGGTCTGTaGCCTGTTAGGAACTGGGCC +
Preference number: 2 (lower is better)
Translates to: PPATSTLCSSSTVPGTLPLWMGL*PVRNWA
Trigger: GGCCCAGTTCCTAACAGGCCACAGACCCATCCACAG...TGGGAGTGTCCCTGGCACGGTAGAGGAGGAGCACAGAGTTGATGTGGCGGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR-3UTR TCA 90 bp AGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCAACGAGCGACCAGAGACCATaGGGGACATGGGCCGCAGAG +
Preference number: 2 (lower is better)
Translates to: RLLQWEAHCSHVLCGFPTSDQRP*GTWAAE
Trigger: CTCTGCGGCCCATGTCCCTCATGGTCTCTGGTCGCT...CGTTGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR-3UTR GCA 90 bp TGTCCAACCTGGGAGGGTGGAATTTCGGCTCACCTGGAGAGGATGCCTGATGACTGGGCCGCAGAGCACTaGTTCCCGGAGCTTCACCTG +
Preference number: 2 (lower is better)
Translates to: CPTWEGGISAHLERMPDDWAAEH*FPELHL
Trigger: CAGGTGAAGCTCCGGGAAGCAGTGCTCTGCGGCCCA...GTCATCAGGCATCCTCTCCAGGTGAGCCGAAATTCCACCCTCCCAGGTTGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR-3UTR CCA 90 bp CCAGCATCTTCCCAGTTCCCTGTAGGTCACGAGGGGCCACTTCTCCCACTTCCTCAGCACTGTCCTCTGTaGGCTGCAGAGCAGGCAGCT +
Preference number: 2 (lower is better)
Translates to: PASSQFPVGHEGPLLPLPQHCPL*AAEQAA
Trigger: AGCTGCCTGCTCTGCAGCCCACAGAGGACAGTGCTG...AGGAAGTGGGAGAAGTGGCCCCTCGTGACCTACAGGGAACTGGGAAGATGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CCA 90 bp AGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCAACGGTGCTGAGAACGAGCTaGGCTGGGGGCACTCCCTGT +
Preference number: 2 (lower is better)
Translates to: RLLQWEAHCSHVLCGFPTVLRTS*AGGTPC
Trigger: ACAGGGAGTGCCCCCAGCCCAGCTCGTTCTCAGCAC...CGTTGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR TCA 90 bp AGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCAACGAGGGTGGTATCCCCCTaGACCCCACCTGGTGATCAC +
Preference number: 2 (lower is better)
Translates to: RLLQWEAHCSHVLCGFPTRVVSP*TPPGDH
Trigger: GTGATCACCAGGTGGGGTTCAGGGGGATACCACCCT...CGTTGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR-3UTR GCA 90 bp TTAAGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCAGCACTGGGCCACGGCTaGCTCCAGAACAGAGCAGCC +
Preference number: 2 (lower is better)
Translates to: LRLLQWEAHCSHVLCGFPALGHG*LQNRAA
Trigger: GGCTGCTCTGTTCTGGAGGCAGCCGTGGCCCAGTGC...TGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCTTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR GCA 90 bp AGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCAACGGCCTCTGACCACCACTaGACTGAGAACACGGCGGGA +
Preference number: 2 (lower is better)
Translates to: RLLQWEAHCSHVLCGFPTASDHH*TENTAG
Trigger: TCCCGCCGTGTTCTCAGTGCAGTGGTGGTCAGAGGC...CGTTGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR GCA 90 bp ACCTCGAACCCATGCGGGATCTTCCAAGAGTGCAATTCCCACAGCTCCACTTGCTCTGGGACCCCCAAGTaGCGTGCAGGACGCCACGAA +
Preference number: 2 (lower is better)
Translates to: TSNPCGIFQECNSHSSTCSGTPK*RAGRHE
Trigger: TTCGTGGCGTCCTGCACGGCACTTGGGGGTCCCAGA...GCAAGTGGAGCTGTGGGAATTGCACTCTTGGAAGATCCCGCATGGGTTCGAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR-3UTR GCA 90 bp GCTACTCGCGCTGTCTCTGAGGCCCTCCTTTGCAGACATCATGACCGTAAGGCTAGAGTCTCTCGTGGCTaGACAGCTCCATGGCCCGGT +
Preference number: 2 (lower is better)
Translates to: ATRAVSEALLCRHHDRKARVSRG*TAPWPG
Trigger: ACCGGGCCATGGAGCTGTGCAGCCACGAGAGACTCT...AGCCTTACGGTCATGATGTCTGCAAAGGAGGGCCTCAGAGACAGCGCGAGTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR-3UTR CCA 90 bp CTCTGTCTCAGGCCACCTGGCATGCGGCATGGGAGCAGCAGGAAATGCGGTCTGAGTTTATCCAGTAGATaGCTGGGGGTGCTACTCGCG +
Preference number: 2 (lower is better)
Translates to: LCLRPPGMRHGSSRKCGLSLSSR*LGVLLA
Trigger: CGCGAGTAGCACCCCCAGCCATCTACTGGATAAACT...CAGACCGCATTTCCTGCTGCTCCCATGCCGCATGCCAGGTGGCCTGAGACAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CCA 90 bp GCACCTTCTCCACCTTCTGATCCTCTCTTGGGTTACTGCCAAAGCCCACAGGTACACTGTTCTGGCCACTaGCACTGGGCCACGGCTGCC +
Preference number: 2 (lower is better)
Translates to: APSPPSDPLLGYCQSPQVHCSGH*HWATAA
Trigger: GGCAGCCGTGGCCCAGTGCCAGTGGCCAGAACAGTG...TACCTGTGGGCTTTGGCAGTAACCCAAGAGAGGATCAGAAGGTGGAGAAGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CCA 90 bp AGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCAACGAGGCTGGCCCCTGTCTaGGTCTTCGCTGCTCTCCTT +
Preference number: 2 (lower is better)
Translates to: RLLQWEAHCSHVLCGFPTRLAPV*VFAALL
Trigger: AAGGAGAGCAGCGAAGACCCAGACAGGGGCCAGCCT...CGTTGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CCA 90 bp ATCACCTGGGTACTCCCAAAGAGAAAACCTGTGCTGAGAACGAGCTGGGCTGGGCTGTCTCAGGCCACCTaGCATGCGGCATGGGAGCAG +
Preference number: 2 (lower is better)
Translates to: ITWVLPKRKPVLRTSWAGLSQAT*HAAWEQ
Trigger: CTGCTCCCATGCCGCATGCCAGGTGGCCTGAGACAG...CCCAGCCCAGCTCGTTCTCAGCACAGGTTTTCTCTTTGGGAGTACCCAGGTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR CAA 90 bp CTGTCTCTGAGGCCCTCCTTTGCAGACATCATGACCGTAAGGCTTTaGGGGCCAGCATCTTCCCAGTTCCCTGTAGGTCACGAGGGGCCA +
Preference number: 2 (lower is better)
Translates to: LSLRPSFADIMTVRL*GPASSQFPVGHEGP
Trigger: TGGCCCCTCGTGACCTACAGGGAACTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAAGGAGGGCCTCAGAGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR CAA 90 bp CCTTTGACCCGCTATGCCGGCTGTCTACAAGACTCCCTTGCCTCCTaGAGCTCTTGCTCAAATGACACCTTCTCCGTGGAGCCCTCCCTG +
Preference number: 2 (lower is better)
Translates to: PLTRYAGCLQDSLAS*SSCSNDTFSVEPSL
Trigger: CAGGGAGGGCTCCACGGAGAAGGTGTCATTTGAGCAAGAGCTCAAGGAGGCAAGGGAGTCTTGTAGACAGCCGGCATAGCGGGTCAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR-3UTR TCA 90 bp CCCAGTTCCCAGAGGATCACAAGGCCAAGGATCCAATGGGCACACCATGAGGACAGAGAAAACCTGTGCTaGGAACGAGCTGGGCTGGGG +
Preference number: 2 (lower is better)
Translates to: PSSQRITRPRIQWAHHEDRENLC*ERAGLG
Trigger: CCCCAGCCCAGCTCGTTCTCAGCACAGGTTTTCTCT...GTCCTCATGGTGTGCCCATTGGATCCTTGGCCTTGTGATCCTCTGGGAACTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR TCA 90 bp GCGGCCTCACCTCGAACCCATGCGGGATCTTCCAAGAGTGCAATTCCCACAGCTAAGCCAGCTCTCGGGTaGGAGTCCTTACTCCCTGTT +
Preference number: 2 (lower is better)
Translates to: AASPRTHAGSSKSAIPTAKPALG*ESLLPV
Trigger: AACAGGGAGTAAGGACTCTCACCCGAGAGCTGGCTT...AGCTGTGGGAATTGCACTCTTGGAAGATCCCGCATGGGTTCGAGGTGAGGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR-3UTR TCA 90 bp TTTGCAGACATCATGACCGTAAGGCTTTTGGGGCCAGCATCTTCCCAGTTCCCTGTGGGATGTGGGGCCTaGACAGCCTGGAGCGGCCAT +
Preference number: 2 (lower is better)
Translates to: FADIMTVRLLGPASSQFPVGCGA*TAWSGH
Trigger: ATGGCCGCTCCAGGCTGTTCAGGCCCCACATCCCAC...AGGGAACTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR-3UTR GCA 90 bp TGTCCAACCTGGGAGGGTGGAATTTCGGCTCACCTGGAGAGGATGCCTGATGACGAAGCCTGGTCTCCCTaGAAAGCCGGGAGGCATCAA +
Preference number: 2 (lower is better)
Translates to: CPTWEGGISAHLERMPDDEAWSP*KAGRHQ
Trigger: TTGATGCCTCCCGGCTTTGCAGGGAGACCAGGCTTC...GTCATCAGGCATCCTCTCCAGGTGAGCCGAAATTCCACCCTCCCAGGTTGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR GCA 90 bp GCTACTCGCGCTGTCTCTGAGGCCCTCCTTTGCAGACATCATGACCGTAAGGCTACGAAGGAGTTTGACTaGCTACTCGCTGGCCCAGGG +
Preference number: 2 (lower is better)
Translates to: ATRAVSEALLCRHHDRKATKEFD*LLAGPG
Trigger: CCCTGGGCCAGCGAGTAGGCAGTCAAACTCCTTCGT...AGCCTTACGGTCATGATGTCTGCAAAGGAGGGCCTCAGAGACAGCGCGAGTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR GCA 90 bp CCTCCCGCCACATCAACTCTGTGCTCCTCCTCTACCGTGCCAGGGACACTCCCATGTCACTGGCATTACTaGCTAAGCTCCACCTCCTGT +
Preference number: 2 (lower is better)
Translates to: PPATSTLCSSSTVPGTLPCHWHY*LSSTSC
Trigger: ACAGGAGGTGGAGCTTAGGCAGTAATGCCAGTGACA...TGGGAGTGTCCCTGGCACGGTAGAGGAGGAGCACAGAGTTGATGTGGCGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR-3UTR CCA 90 bp GCTACTCGCGCTGTCTCTGAGGCCCTCCTTTGCAGACATCATGACCGTAAGGCTCACACCTCATGCTCATaGCTCCTGCTGCCTCTGCAG +
Preference number: 2 (lower is better)
Translates to: ATRAVSEALLCRHHDRKAHTSCS*LLLPLQ
Trigger: CTGCAGAGGCAGCAGGAGCCATGAGCATGAGGTGTG...AGCCTTACGGTCATGATGTCTGCAAAGGAGGGCCTCAGAGACAGCGCGAGTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CCA 90 bp GCACCTTCTCCACCTTCTGATCCTCTCTTGGGTTACTGCCAAAGCCCACAGGTAGTGCTGAGAACGAGCTaGGCTGGGGGCACTCCCTGT +
Preference number: 2 (lower is better)
Translates to: APSPPSDPLLGYCQSPQVVLRTS*AGGTPC
Trigger: ACAGGGAGTGCCCCCAGCCCAGCTCGTTCTCAGCAC...TACCTGTGGGCTTTGGCAGTAACCCAAGAGAGGATCAGAAGGTGGAGAAGGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CCA 90 bp TGGTGCCTTCTTTCACATGTTAGCTGTCCCCATTTCACCTATCAGGAAGGAGTCCAGGCCGGGGCCTTCTaGGACCCCCAAGTGCCGTGC +
Preference number: 2 (lower is better)
Translates to: WCLLSHVSCPHFTYQEGVQAGAF*DPQVPC
Trigger: GCACGGCACTTGGGGGTCCCAGAAGGCCCCGGCCTG...GACTCCTTCCTGATAGGTGAAATGGGGACAGCTAACATGTGAAAGAAGGCACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR CAA 90 bp CAGCAGGAAATGCGGTCTGGCCACGTTTCTGAACAACGCACAGCCTaGCTTAGAAGACGCCAAGGACACCGACCAAGGGCCAAGGTTCCA +
Preference number: 2 (lower is better)
Translates to: QQEMRSGHVSEQRTA*LRRRQGHRPRAKVP
Trigger: TGGAACCTTGGCCCTTGGTCGGTGTCCTTGGCGTCTTCTAAGCAAGGCTGTGCGTTGTTCAGAAACGTGGCCAGACCGCATTTCCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR CAA 90 bp GAACCCATGCGGGATCTTCCAAGAGTGCAATTCCCACAGCTCCACTaGCTCAAGGAAGTCTCGGTGCACAGAAGGAAGCCTGCAGCCTCC +
Preference number: 2 (lower is better)
Translates to: EPMRDLPRVQFPQLH*LKEVSVHRRKPAAS
Trigger: GGAGGCTGCAGGCTTCCTTCTGTGCACCGAGACTTCCTTGAGCAAGTGGAGCTGTGGGAATTGCACTCTTGGAAGATCCCGCATGGGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR-3UTR TCA 90 bp GCACCTTCTCCACCTTCTGATCCTCTCTTGGGTTACTGCCAAAGCCCACAGGTAAGGGCTTTCTCCTGGTaGCCAGGAGGGTCCCATTCG +
Preference number: 2 (lower is better)
Translates to: APSPPSDPLLGYCQSPQVRAFSW*PGGSHS
Trigger: CGAATGGGACCCTCCTGGTCACCAGGAGAAAGCCCT...TACCTGTGGGCTTTGGCAGTAACCCAAGAGAGGATCAGAAGGTGGAGAAGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR TCA 90 bp GTACAACCAAGGATTGCCCTGCATCTGCATGCCACTCTGATGTCCTGCCAGACAGTGGCCACACACTCCTaGGAGAGCTGGTCTTTGGGC +
Preference number: 2 (lower is better)
Translates to: VQPRIALHLHATLMSCQTVATHS*ESWSLG
Trigger: GCCCAAAGACCAGCTCTCTCAGGAGTGTGTGGCCAC...TGTCTGGCAGGACATCAGAGTGGCATGCAGATGCAGGGCAATCCTTGGTTGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR-3UTR TCA 90 bp CCTCCCGCCACATCAACTCTGTGCTCCTCCTCTACCGTGCCAGGGACACTCCCATTAATCCCAGCACTTTaGGAGGCAGATCACTTGAGG +
Preference number: 2 (lower is better)
Translates to: PPATSTLCSSSTVPGTLPLIPAL*EADHLR
Trigger: CCTCAAGTGATCTGCCTCTCAAAGTGCTGGGATTAA...TGGGAGTGTCCCTGGCACGGTAGAGGAGGAGCACAGAGTTGATGTGGCGGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR-3UTR GCA 90 bp GTACAACCAAGGATTGCCCTGCATCTGCATGCCACTCTGATGTCCTGCCAGACATCCCAAAACATTCCCTaGCCCTGCTCCCCCGGTCCA +
Preference number: 2 (lower is better)
Translates to: VQPRIALHLHATLMSCQTSQNIP*PCSPGP
Trigger: TGGACCGGGGGAGCAGGGGCAGGGAATGTTTTGGGA...TGTCTGGCAGGACATCAGAGTGGCATGCAGATGCAGGGCAATCCTTGGTTGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR-3UTR CCA 90 bp CCCAGTTCCCAGAGGATCACAAGGCCAAGGATCCAATGGGCACACCATGAGGACTCAAGGCACTTGGTTTaGGAAGCCTGGTCTCCCTGC +
Preference number: 2 (lower is better)
Translates to: PSSQRITRPRIQWAHHEDSRHLV*EAWSPC
Trigger: GCAGGGAGACCAGGCTTCCCAAACCAAGTGCCTTGA...GTCCTCATGGTGTGCCCATTGGATCCTTGGCCTTGTGATCCTCTGGGAACTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CCA 90 bp CACAAAAGTCAGCGACCAGAGACCATGAGGGACATGGGCCGCAGAGCACTGCTTTCAAGGCACTTGGTTTaGGAAGCCTGGTCTCCCTGC +
Preference number: 2 (lower is better)
Translates to: HKSQRPETMRDMGRRALLSRHLV*EAWSPC
Trigger: GCAGGGAGACCAGGCTTCCCAAACCAAGTGCCTTGA...AAGCAGTGCTCTGCGGCCCATGTCCCTCATGGTCTCTGGTCGCTGACTTTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR-3UTR CCA 90 bp GCACCTTCTCCACCTTCTGATCCTCTCTTGGGTTACTGCCAAAGCCCACAGGTATCTGGTCCTGAAGGCTaGCCCCTGTCTGGGTCTTCG +
Preference number: 2 (lower is better)
Translates to: APSPPSDPLLGYCQSPQVSGPEG*PLSGSS
Trigger: CGAAGACCCAGACAGGGGCCAGCCTTCAGGACCAGA...TACCTGTGGGCTTTGGCAGTAACCCAAGAGAGGATCAGAAGGTGGAGAAGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CCA 90 bp GACAGAGAAAGGAACGGCTCTGGGAAAGCCAAACCTGGCCAAAGTCCAACTTCCCACCTTGCAGCCGTATaGGGAGCTCTGTCTCAGGCC +
Preference number: 2 (lower is better)
Translates to: DRERNGSGKAKPGQSPTSHLAAV*GALSQA
Trigger: GGCCTGAGACAGAGCTCCCCATACGGCTGCAAGGTG...GGAAGTTGGACTTTGGCCAGGTTTGGCTTTCCCAGAGCCGTTCCTTTCTCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CCA 90 bp AGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCAACGAGAAGGCTGCAAAAGTaGAACTGGCCCCCAGTTCCC +
Preference number: 2 (lower is better)
Translates to: RLLQWEAHCSHVLCGFPTRRLQK*NWPPVP
Trigger: GGGAACTGGGGGCCAGTTCCACTTTTGCAGCCTTCT...CGTTGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CCA 90 bp AGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCAACGTCCAACCTGGGAGGGTaGAATTTCGGCTCACCTGGA +
Preference number: 2 (lower is better)
Translates to: RLLQWEAHCSHVLCGFPTSNLGG*NFGSPG
Trigger: TCCAGGTGAGCCGAAATTCCACCCTCCCAGGTTGGA...CGTTGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CCA 90 bp GGTGATCACACCCAGGTCAGAAATGACCACCTAGAGCACGACACCATCACTCACCTGACAGGTGGGATGTaGGGCCTGAACAGCCTGGAG +
Preference number: 2 (lower is better)
Translates to: GDHTQVRNDHLEHDTITHLTGGM*GLNSLE
Trigger: CTCCAGGCTGTTCAGGCCCCACATCCCACCTGTCAG...GTGAGTGATGGTGTCGTGCTCTAGGTGGTCATTTCTGACCTGGGTGTGATCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR-3UTR CCA 90 bp CCCAGTTCCCAGAGGATCACAAGGCCAAGGATCCAATGGGCACACCATGAGGACCCATGTCATGGCCACTaGGTCTCCTCCCCAGCATTT +
Preference number: 2 (lower is better)
Translates to: PSSQRITRPRIQWAHHEDPCHGH*VSSPAF
Trigger: AAATGCTGGGGAGGAGACCCAGTGGCCATGACATGG...GTCCTCATGGTGTGCCCATTGGATCCTTGGCCTTGTGATCCTCTGGGAACTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR-3UTR TCA 90 bp ATCACCTGGGTACTCCCAAAGAGAAAACCTGTGCTGAGAACGAGCTGGGCTGGGGCCAGCATGCATAGCTaGCCAGTCCCTAATGCCACA +
Preference number: 2 (lower is better)
Translates to: ITWVLPKRKPVLRTSWAGASMHS*PVPNAT
Trigger: TGTGGCATTAGGGACTGGTCAGCTATGCATGCTGGC...CCCAGCCCAGCTCGTTCTCAGCACAGGTTTTCTCTTTGGGAGTACCCAGGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR TCA 90 bp AGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCAACGCGGACCAGATCCCTGTaGTTCTGGGACAGAAGAGAT +
Preference number: 2 (lower is better)
Translates to: RLLQWEAHCSHVLCGFPTRTRSL*FWDRRD
Trigger: ATCTCTTCTGTCCCAGAATCACAGGGATCTGGTCCG...CGTTGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR TCA 90 bp CCCAGTTCCCAGAGGATCACAAGGCCAAGGATCCAATGGGCACACCATGAGGACCCGCAACACGATATGTaGTGGTGCAGAGCTGTTCTG +
Preference number: 2 (lower is better)
Translates to: PSSQRITRPRIQWAHHEDPQHDM*WCRAVL
Trigger: CAGAACAGCTCTGCACCATCACATATCGTGTTGCGG...GTCCTCATGGTGTGCCCATTGGATCCTTGGCCTTGTGATCCTCTGGGAACTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR GCA 90 bp TTAAGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCAGAAGCCTGGTCTCCCTaGAAAGCCGGGAGGCATCAA +
Preference number: 2 (lower is better)
Translates to: LRLLQWEAHCSHVLCGFPEAWSP*KAGRHQ
Trigger: TTGATGCCTCCCGGCTTTGCAGGGAGACCAGGCTTC...TGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR GCA 90 bp GCACCTTCTCCACCTTCTGATCCTCTCTTGGGTTACTGCCAAAGCCCACAGGTACCCCACCTGCCAGCATaGATAGCTGACCAGTCCCTA +
Preference number: 2 (lower is better)
Translates to: APSPPSDPLLGYCQSPQVPHLPA*IADQSL
Trigger: TAGGGACTGGTCAGCTATGCATGCTGGCAGGTGGGG...TACCTGTGGGCTTTGGCAGTAACCCAAGAGAGGATCAGAAGGTGGAGAAGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CCA 90 bp TTTGCAGACATCATGACCGTAAGGCTTTTGGGGCCAGCATCTTCCCAGTTCCCTAGGCTGGCCCCTGTCTaGGTCTTCGCTGCTCTCCTT +
Preference number: 2 (lower is better)
Translates to: FADIMTVRLLGPASSQFPRLAPV*VFAALL
Trigger: AAGGAGAGCAGCGAAGACCCAGACAGGGGCCAGCCT...AGGGAACTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CCA 90 bp CTACAGACCAAACAGCTAAGCCGCAACACGATATGTGATGGTGCAGAGCTGTTCGGCTGCACAGCTCCATaGCCCGGTAGGTGTGTGCGA +
Preference number: 2 (lower is better)
Translates to: LQTKQLSRNTICDGAELFGCTAP*PGRCVR
Trigger: TCGCACACACCTACCGGGCCATGGAGCTGTGCAGCC...GAACAGCTCTGCACCATCACATATCGTGTTGCGGCTTAGCTGTTTGGTCTGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR-3UTR TCA 90 bp CTCTGTCTCAGGCCACCTGGCATGCGGCATGGGAGCAGCAGGAAATGCGGTCTGAGAATGTTCTATACATaGACACTCTTGAGGGGATGG +
Preference number: 2 (lower is better)
Translates to: LCLRPPGMRHGSSRKCGLRMFYT*TLLRGW
Trigger: CCATCCCCTCAAGAGTGTTCATGTATAGAACATTCT...CAGACCGCATTTCCTGCTGCTCCCATGCCGCATGCCAGGTGGCCTGAGACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR TCA 90 bp CCCAGTTCCCAGAGGATCACAAGGCCAAGGATCCAATGGGCACACCATGAGGACGAACTTTCCACTTGCTaGGCACAGTGGGAAACCAGA +
Preference number: 2 (lower is better)
Translates to: PSSQRITRPRIQWAHHEDELSTC*AQWETR
Trigger: TCTGGTTTCCCACTGTGCTCAGCAAGTGGAAAGTTC...GTCCTCATGGTGTGCCCATTGGATCCTTGGCCTTGTGATCCTCTGGGAACTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR TCA 90 bp TTAAGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCACCAATGGGCACACCATaGGGACCCAAGGAAAGGACA +
Preference number: 2 (lower is better)
Translates to: LRLLQWEAHCSHVLCGFPPMGTP*GPKERT
Trigger: TGTCCTTTCCTTGGGTCCTCATGGTGTGCCCATTGG...TGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR TCA 90 bp GAAAAGCCAATGTCCTCACACCAGCCACTAGGCCCTACACCAGTGGTATCCGTAACCAGGGTTTACCTCTaGCACCCCACTTCACAGAGC +
Preference number: 2 (lower is better)
Translates to: EKPMSSHQPLGPTPVVSVTRVYL*HPTSQS
Trigger: GCTCTGTGAAGTGGGGTGTCAGAGGTAAACCCTGGT...TACGGATACCACTGGTGTAGGGCCTAGTGGCTGGTGTGAGGACATTGGCTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR-3UTR TCA 90 bp GAAAAGCCAATGTCCTCACACCAGCCACTAGGCCCTACACCAGTGGTATCCGTATTGAGGCCAGGAGTTTaGGACCACCCTGGCCAACAT +
Preference number: 2 (lower is better)
Translates to: EKPMSSHQPLGPTPVVSVLRPGV*DHPGQH
Trigger: ATGTTGGCCAGGGTGGTCTCAAACTCCTGGCCTCAA...TACGGATACCACTGGTGTAGGGCCTAGTGGCTGGTGTGAGGACATTGGCTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR-3UTR TCA 90 bp GAAAAGCCAATGTCCTCACACCAGCCACTAGGCCCTACACCAGTGGTATCCGTAGAGCTCTTGCTCAAATaGCACCTTCTCCGTGGAGCC +
Preference number: 2 (lower is better)
Translates to: EKPMSSHQPLGPTPVVSVELLLK*HLLRGA
Trigger: GGCTCCACGGAGAAGGTGTCATTTGAGCAAGAGCTC...TACGGATACCACTGGTGTAGGGCCTAGTGGCTGGTGTGAGGACATTGGCTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR-3UTR GCA 90 bp TCTGTGATCAATGAGAAATCTCACACTGCAGGACGACACCCTCTGAACTCCGTCCTGTCCTCTGTGGGCTaGAGAGCAGGCAGCTCAAGG +
Preference number: 2 (lower is better)
Translates to: SVINEKSHTAGRHPLNSVLSSVG*RAGSSR
Trigger: CCTTGAGCTGCCTGCTCTGCAGCCCACAGAGGACAG...GACGGAGTTCAGAGGGTGTCGTCCTGCAGTGTGAGATTTCTCATTGATCACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR GCA 90 bp AGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCAACGGGTGGGAAGAAACTCTaGTGGATCTACTCACCTGCA +
Preference number: 2 (lower is better)
Translates to: RLLQWEAHCSHVLCGFPTGGKKL*WIYSPA
Trigger: TGCAGGTGAGTAGATCCAGCAGAGTTTCTTCCCACC...CGTTGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR GCA 90 bp CCTCCCGCCACATCAACTCTGTGCTCCTCCTCTACCGTGCCAGGGACACTCCCAAAAAAGGTTGGGCACTaGTGCTATACAGTATCTCTC +
Preference number: 2 (lower is better)
Translates to: PPATSTLCSSSTVPGTLPKKVGH*CYTVSL
Trigger: GAGAGATACTGTATAGCAGCAGTGCCCAACCTTTTT...TGGGAGTGTCCCTGGCACGGTAGAGGAGGAGCACAGAGTTGATGTGGCGGGAGG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR-3UTR CCA 90 bp TGTGAACAGATGCCAGGCAGTAGTTACCAATCCAAGGTGAGGTGCTCAAGTTCAAACCGGCAGGGCAAGTaGCAGAAGCCAGCTCTCGGG +
Preference number: 2 (lower is better)
Translates to: CEQMPGSSYQSKVRCSSSNRQGK*QKPALG
Trigger: CCCGAGAGCTGGCTTCTGCCACTTGCCCTGCCGGTT...TGAACTTGAGCACCTCACCTTGGATTGGTAACTACTGCCTGGCATCTGTTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR-3UTR TCA 90 bp AAGACTCAAGAAGCAACAAGAGAAATTCTGGCACACGTGCCCAAGAGAGGTTTACAGGACGACACCCTCTaGACTCCGTCCTCCCCCTCC +
Preference number: 2 (lower is better)
Translates to: KTQEATREILAHVPKRGLQDDTL*TPSSPS
Trigger: GGAGGGGGAGGACGGAGTTCAGAGGGTGTCGTCCTG...TAAACCTCTCTTGGGCACGTGTGCCAGAATTTCTCTTGTTGCTTCTTGAGTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR TCA 90 bp TTAAGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCACTTCGCTGCTCTCCTTaGAGGCCAGGGAACTCTTTA +
Preference number: 2 (lower is better)
Translates to: LRLLQWEAHCSHVLCGFPLRCSP*RPGNSL
Trigger: TAAAGAGTTCCCTGGCCTTCAAGGAGAGCAGCGAAG...TGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR TCA 90 bp CTACAGACCAAACAGCTAAGCCGCAACACGATATGTGATGGTGCAGAGCTGTTCAGGAAAGACCAGAGGTaGCCGGACCAGATCCCTGTG +
Preference number: 2 (lower is better)
Translates to: LQTKQLSRNTICDGAELFRKDQR*PDQIPV
Trigger: CACAGGGATCTGGTCCGGTCACCTCTGGTCTTTCCT...GAACAGCTCTGCACCATCACATATCGTGTTGCGGCTTAGCTGTTTGGTCTGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR TCA 90 bp CTTTCACCTGAAAAACGGAGTCCAAATCTGGGGCAGGCAAATAATGAAACCCTCCCTCCCAGGTTCGGGTaGTTCTCCTGCCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: LSPEKRSPNLGQANNETLPPRFG*FSCLSL
Trigger: GAGGCTGAGGCAGGAGAATCACCCGAACCTGGGAGG...GAGGGTTTCATTATTTGCCTGCCCCAGATTTGGACTCCGTTTTTCAGGTGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR-3UTR TCA 90 bp TTTGCAGACATCATGACCGTAAGGCTTTTGGGGCCAGCATCTTCCCAGTTCCCTCACCCAGGTCAGAAATaGCCACCTAGAGCACGACAC +
Preference number: 2 (lower is better)
Translates to: FADIMTVRLLGPASSQFPHPGQK*PPRARH
Trigger: GTGTCGTGCTCTAGGTGGTCATTTCTGACCTGGGTG...AGGGAACTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR-3UTR TCA 90 bp GCACCTTCTCCACCTTCTGATCCTCTCTTGGGTTACTGCCAAAGCCCACAGGTAAAGCCGCCTAGCTCCTaGGAGATGAGAATGCCAGTA +
Preference number: 2 (lower is better)
Translates to: APSPPSDPLLGYCQSPQVKPPSS*EMRMPV
Trigger: TACTGGCATTCTCATCTCTCAGGAGCTAGGCGGCTT...TACCTGTGGGCTTTGGCAGTAACCCAAGAGAGGATCAGAAGGTGGAGAAGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR-3UTR GCA 90 bp CACAGCTTTAGGGACACTGAAAAGGAATACTGTATCCACCAAACACACACACAGGCACTGGGCCACGGCTaGCTCCAGAACAGAGCAGCC +
Preference number: 2 (lower is better)
Translates to: HSFRDTEKEYCIHQTHTQALGHG*LQNRAA
Trigger: GGCTGCTCTGTTCTGGAGGCAGCCGTGGCCCAGTGC...CTGTGTGTGTGTTTGGTGGATACAGTATTCCTTTTCAGTGTCCCTAAAGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR GCA 90 bp GACAGAGAAAGGAACGGCTCTGGGAAAGCCAAACCTGGCCAAAGTCCAACTTCCACAGGTAAAGCACCTTaGAGCCGTATGGGGAGCTCT +
Preference number: 2 (lower is better)
Translates to: DRERNGSGKAKPGQSPTSTGKAP*SRMGSS
Trigger: AGAGCTCCCCATACGGCTGCAAGGTGCTTTACCTGT...GGAAGTTGGACTTTGGCCAGGTTTGGCTTTCCCAGAGCCGTTCCTTTCTCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR GCA 90 bp GGGAAACCAGAATTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTGCCTCTGACCACCACTaGACTGAGAACACGGCGGGA +
Preference number: 2 (lower is better)
Translates to: GKPEFSRLELDTPDDAQGASDHH*TENTAG
Trigger: TCCCGCCGTGTTCTCAGTGCAGTGGTGGTCAGAGGC...ACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAATTCTGGTTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR GCA 90 bp TTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTGTTTTCATGACACGTCTCCCGCACCTCTaGAGGCAGCTCCCGGTAGTG +
Preference number: 2 (lower is better)
Translates to: FSRLELDTPDDAQGVFMTRLPHL*RQLPVV
Trigger: CACTACCGGGAGCTGCCTGCAGAGGTGCGGGAGACG...TGTCATGAAAACACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR-3UTR CCA 90 bp GCCGCAACACGATATGTGATGGTGCAGAGCTGTTCTGGCCTGAAAAGAACTTTCCACACCTCATGCTCATaGCTCCTGCTGCCTCTGCAG +
Preference number: 2 (lower is better)
Translates to: AATRYVMVQSCSGLKRTFHTSCS*LLLPLQ
Trigger: CTGCAGAGGCAGCAGGAGCCATGAGCATGAGGTGTG...GAAAGTTCTTTTCAGGCCAGAACAGCTCTGCACCATCACATATCGTGTTGCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CCA 90 bp TCTAGAGTTGGTGGGAAGAAACTCTGCTGGATCTACTCACCTGCAGATCTTCCATCTGGTCCTGAAGGCTaGCCCCTGTCTGGGTCTTCG +
Preference number: 2 (lower is better)
Translates to: SRVGGKKLCWIYSPADLPSGPEG*PLSGSS
Trigger: CGAAGACCCAGACAGGGGCCAGCCTTCAGGACCAGA...TGGAAGATCTGCAGGTGAGTAGATCCAGCAGAGTTTCTTCCCACCAACTCTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CCA 90 bp GCACCTTCTCCACCTTCTGATCCTCTCTTGGGTTACTGCCAAAGCCCACAGGTATTGTTCCACCGGCCTTaGGGACGAAGGAGTTTGACT +
Preference number: 2 (lower is better)
Translates to: APSPPSDPLLGYCQSPQVLFHRP*GRRSLT
Trigger: AGTCAAACTCCTTCGTCCCCAAGGCCGGTGGAACAA...TACCTGTGGGCTTTGGCAGTAACCCAAGAGAGGATCAGAAGGTGGAGAAGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CCA 90 bp AAGACTCAAGAAGCAACAAGAGAAATTCTGGCACACGTGCCCAAGAGAGGTTTAGAGAACGAGCTGGGCTaGGGGCACTCCCTGTGGCAG +
Preference number: 2 (lower is better)
Translates to: KTQEATREILAHVPKRGLENELG*GHSLWQ
Trigger: CTGCCACAGGGAGTGCCCCCAGCCCAGCTCGTTCTC...TAAACCTCTCTTGGGCACGTGTGCCAGAATTTCTCTTGTTGCTTCTTGAGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR CAA 90 bp CCTGTTAAATCACTCGTGGCACCTTCTCCACCTTCTGATCCTCTCTaGGGTTACTGCCAAAGCCCACAGGTAAAGCACCTTGCAGCCGTA +
Preference number: 2 (lower is better)
Translates to: PVKSLVAPSPPSDPL*GYCQSPQVKHLAAV
Trigger: TACGGCTGCAAGGTGCTTTACCTGTGGGCTTTGGCAGTAACCCAAGAGAGGATCAGAAGGTGGAGAAGGTGCCACGAGTGATTTAACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR CAA 90 bp GATCTTCCAGAACATCTATCTGTAACTGATCAGAGTGATGTCTCCTaGGAAGGGCCTCTGACCACCACTGCACTGAGAACACGGCGGGAG +
Preference number: 2 (lower is better)
Translates to: DLPEHLSVTDQSDVS*EGPLTTTALRTRRE
Trigger: CTCCCGCCGTGTTCTCAGTGCAGTGGTGGTCAGAGGCCCTTCCAAGGAGACATCACTCTGATCAGTTACAGATAGATGTTCTGGAAGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR TCA 90 bp CTACAGACCAAACAGCTAAGCCGCAACACGATATGTGATGGTGCAGAGCTGTTCCCTCCTCTCCCTTCCTaGAAGGCCTGTAGACTGACA +
Preference number: 2 (lower is better)
Translates to: LQTKQLSRNTICDGAELFPPLPS*KACRLT
Trigger: TGTCAGTCTACAGGCCTTTCAGGAAGGGAGAGGAGG...GAACAGCTCTGCACCATCACATATCGTGTTGCGGCTTAGCTGTTTGGTCTGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR TCA 90 bp GGGAAACCAGAATTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTAGAGAAAACCTGTGCTaGGAACGAGCTGGGCTGGGG +
Preference number: 2 (lower is better)
Translates to: GKPEFSRLELDTPDDAQGRENLC*ERAGLG
Trigger: CCCCAGCCCAGCTCGTTCTCAGCACAGGTTTTCTCT...ACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAATTCTGGTTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR TCA 90 bp CACAGCTTTAGGGACACTGAAAAGGAATACTGTATCCACCAAACACACACACAGGAGGAGGCCTTGAAGTaGGCAAGGCCCAGCCAGTCC +
Preference number: 2 (lower is better)
Translates to: HSFRDTEKEYCIHQTHTQEEALK*ARPSQS
Trigger: GGACTGGCTGGGCCTTGCTCACTTCAAGGCCTCCTC...CTGTGTGTGTGTTTGGTGGATACAGTATTCCTTTTCAGTGTCCCTAAAGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR-3UTR TCA 90 bp CCTCCCGCCACATCAACTCTGTGCTCCTCCTCTACCGTGCCAGGGACACTCCCACAAAATAGGAAATCCTaGAGTTTGAAGGACTCTGTT +
Preference number: 2 (lower is better)
Translates to: PPATSTLCSSSTVPGTLPQNRKS*SLKDSV
Trigger: AACAGAGTCCTTCAAACTTCAGGATTTCCTATTTTG...TGGGAGTGTCCCTGGCACGGTAGAGGAGGAGCACAGAGTTGATGTGGCGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR-3UTR GCA 90 bp TTAAGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCATTCATTTCTGAGACCTaGAGACACAACCCCACCTGC +
Preference number: 2 (lower is better)
Translates to: LRLLQWEAHCSHVLCGFPFISET*RHNPTC
Trigger: GCAGGTGGGGTTGTGTCTGCAGGTCTCAGAAATGAA...TGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR GCA 90 bp GCCGCAACACGATATGTGATGGTGCAGAGCTGTTCTGGCCTGAAAAGAACTTTCGGGAGTGAGAACACCTaGGCACCCAGGATTTCACAC +
Preference number: 2 (lower is better)
Translates to: AATRYVMVQSCSGLKRTFGSENT*APRISH
Trigger: GTGTGAAATCCTGGGTGCGCAGGTGTTCTCACTCCC...GAAAGTTCTTTTCAGGCCAGAACAGCTCTGCACCATCACATATCGTGTTGCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR GCA 90 bp AGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCAACGTGGCTCGACATAAGATaGCGCCATCAGCAGAATTAT +
Preference number: 2 (lower is better)
Translates to: RLLQWEAHCSHVLCGFPTWLDIR*RHQQNY
Trigger: ATAATTCTGCTGATGGCGGCATCTTATGTCGAGCCA...CGTTGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR GCA 90 bp ACACCAGATGATGCCCAAGGTGTTTTCATGACAAGTACCCACACGAGATCTCTTTCCCGGAGCTTCACCTaGACCTACGTCCCTGAAGGG +
Preference number: 2 (lower is better)
Translates to: TPDDAQGVFMTSTHTRSLSRSFT*TYVPEG
Trigger: CCCTTCAGGGACGTAGGTGCAGGTGAAGCTCCGGGA...AAGAGATCTCGTGTGGGTACTTGTCATGAAAACACCTTGGGCATCATCTGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR-3UTR CCA 90 bp CACAGCTTTAGGGACACTGAAAAGGAATACTGTATCCACCAAACACACACACAGGCCCTCAGTCACAGCTaGGGCCACCAGAACAGAGGG +
Preference number: 2 (lower is better)
Translates to: HSFRDTEKEYCIHQTHTQALSHS*GHQNRG
Trigger: CCCTCTGTTCTGGTGGCCCCAGCTGTGACTGAGGGC...CTGTGTGTGTGTTTGGTGGATACAGTATTCCTTTTCAGTGTCCCTAAAGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CCA 90 bp TCTGTGATCAATGAGAAATCTCACACTGCAGGACGACACCCTCTGAACTCCGTCGCAGCTCAAGGCACTTaGTTTGGGAAGCCTGGTCTC +
Preference number: 2 (lower is better)
Translates to: SVINEKSHTAGRHPLNSVAAQGT*FGKPGL
Trigger: GAGACCAGGCTTCCCAAACCAAGTGCCTTGAGCTGC...GACGGAGTTCAGAGGGTGTCGTCCTGCAGTGTGAGATTTCTCATTGATCACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CCA 90 bp GACAGAGAAAGGAACGGCTCTGGGAAAGCCAAACCTGGCCAAAGTCCAACTTCCTGGGAAAGCCAAACCTaGCCAAAGTCCAACTTCCTG +
Preference number: 2 (lower is better)
Translates to: DRERNGSGKAKPGQSPTSWESQT*PKSNFL
Trigger: CAGGAAGTTGGACTTTGGCCAGGTTTGGCTTTCCCA...GGAAGTTGGACTTTGGCCAGGTTTGGCTTTCCCAGAGCCGTTCCTTTCTCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CCA 90 bp GCCGCAACACGATATGTGATGGTGCAGAGCTGTTCTGGCCTGAAAAGAACTTTCCTGCAAAAGTGGAACTaGCCCCCAGTTCCCAGAGGA +
Preference number: 2 (lower is better)
Translates to: AATRYVMVQSCSGLKRTFLQKWN*PPVPRG
Trigger: TCCTCTGGGAACTGGGGGCCAGTTCCACTTTTGCAG...GAAAGTTCTTTTCAGGCCAGAACAGCTCTGCACCATCACATATCGTGTTGCGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CCA 90 bp GACAGAGAAAGGAACGGCTCTGGGAAAGCCAAACCTGGCCAAAGTCCAACTTCCCTTTGGCCAAAGTGTTaGTTAAGGCTGCTCCAGTGG +
Preference number: 2 (lower is better)
Translates to: DRERNGSGKAKPGQSPTSLWPKC*LRLLQW
Trigger: CCACTGGAGCAGCCTTAACCAACACTTTGGCCAAAG...GGAAGTTGGACTTTGGCCAGGTTTGGCTTTCCCAGAGCCGTTCCTTTCTCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CCA 90 bp CTTTCACCTGAAAAACGGAGTCCAAATCTGGGGCAGGCAAATAATGAAACCCTCGACAGACCCTTCCCCTaGATCCCAACGCCCTTTCGG +
Preference number: 2 (lower is better)
Translates to: LSPEKRSPNLGQANNETLDRPFP*IPTPFR
Trigger: CCGAAAGGGCGTTGGGATCCAGGGGAAGGGTCTGTC...GAGGGTTTCATTATTTGCCTGCCCCAGATTTGGACTCCGTTTTTCAGGTGAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR CAA 90 bp AAGTCGCCTGAGATTGGAGTGTCCGTCCCAGTGGGGTCCCCGCATTaGAGGTATGTTTATACATGTTTACACACAGTGGCTGCATCAGAC +
Preference number: 2 (lower is better)
Translates to: KSPEIGVSVPVGSPH*RYVYTCLHTVAASD
Trigger: GTCTGATGCAGCCACTGTGTGTAAACATGTATAAACATACCTCAAATGCGGGGACCCCACTGGGACGGACACTCCAATCTCAGGCGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR-3UTR TCA 90 bp AGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCAACGCTCTTGAGGGGATGGTaGTTTTTGGTACCACAAAAA +
Preference number: 2 (lower is better)
Translates to: RLLQWEAHCSHVLCGFPTLLRGW*FLVPQK
Trigger: TTTTTGTGGTACCAAAAATCACCATCCCCTCAAGAG...CGTTGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR TCA 90 bp AAGACTCAAGAAGCAACAAGAGAAATTCTGGCACACGTGCCCAAGAGAGGTTTAAGGCCTGAGCTGCAATaGTCCCCCAACTGGCTGGAG +
Preference number: 2 (lower is better)
Translates to: KTQEATREILAHVPKRGLRPELQ*SPNWLE
Trigger: CTCCAGCCAGTTGGGGGATCATTGCAGCTCAGGCCT...TAAACCTCTCTTGGGCACGTGTGCCAGAATTTCTCTTGTTGCTTCTTGAGTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR TCA 90 bp GCCGCAACACGATATGTGATGGTGCAGAGCTGTTCTGGCCTGAAAAGAACTTTCCGGACCAGATCCCTGTaGTTCTGGGACAGAAGAGAT +
Preference number: 2 (lower is better)
Translates to: AATRYVMVQSCSGLKRTFRTRSL*FWDRRD
Trigger: ATCTCTTCTGTCCCAGAATCACAGGGATCTGGTCCG...GAAAGTTCTTTTCAGGCCAGAACAGCTCTGCACCATCACATATCGTGTTGCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR TCA 90 bp TTAAGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCAAGAGCTGTTCTGGCCTaGAAAGAACTTTCCACTTGC +
Preference number: 2 (lower is better)
Translates to: LRLLQWEAHCSHVLCGFPRAVLA*KELSTC
Trigger: GCAAGTGGAAAGTTCTTTTCAGGCCAGAACAGCTCT...TGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR TCA 90 bp ACACCAGATGATGCCCAAGGTGTTTTCATGACAAGTACCCACACGAGATCTCTTTTTGCCAAGTCCAGCTaGAGCCGCCTAGCTCCTGAG +
Preference number: 2 (lower is better)
Translates to: TPDDAQGVFMTSTHTRSLFAKSS*SRLAPE
Trigger: CTCAGGAGCTAGGCGGCTTCAGCTGGACTTGGCAAA...AAGAGATCTCGTGTGGGTACTTGTCATGAAAACACCTTGGGCATCATCTGGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR-3UTR GCA 90 bp TTTGCAGACATCATGACCGTAAGGCTTTTGGGGCCAGCATCTTCCCAGTTCCCTTCTGAGGCCCTCCTTTaGAGACATCATGACCGTAAG +
Preference number: 2 (lower is better)
Translates to: FADIMTVRLLGPASSQFPSEALL*RHHDRK
Trigger: CTTACGGTCATGATGTCTGCAAAGGAGGGCCTCAGA...AGGGAACTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR GCA 90 bp ACACCAGATGATGCCCAAGGTGTTTTCATGACAAGTACCCACACGAGATCTCTTTCACCAGGCCTGAGCTaGAATGATCCCCCAACTGGC +
Preference number: 2 (lower is better)
Translates to: TPDDAQGVFMTSTHTRSLSPGLS*NDPPTG
Trigger: GCCAGTTGGGGGATCATTGCAGCTCAGGCCTGGTGA...AAGAGATCTCGTGTGGGTACTTGTCATGAAAACACCTTGGGCATCATCTGGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR GCA 90 bp GCCGCAACACGATATGTGATGGTGCAGAGCTGTTCTGGCCTGAAAAGAACTTTCACAGGTAAAGCACCTTaGAGCCGTATGGGGAGCTCT +
Preference number: 2 (lower is better)
Translates to: AATRYVMVQSCSGLKRTFTGKAP*SRMGSS
Trigger: AGAGCTCCCCATACGGCTGCAAGGTGCTTTACCTGT...GAAAGTTCTTTTCAGGCCAGAACAGCTCTGCACCATCACATATCGTGTTGCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR GCA 90 bp GCCGCAACACGATATGTGATGGTGCAGAGCTGTTCTGGCCTGAAAAGAACTTTCAGATCGAGACCATCCTaGCTAACATGGGGAAACCCC +
Preference number: 2 (lower is better)
Translates to: AATRYVMVQSCSGLKRTFRSRPS*LTWGNP
Trigger: GGGGTTTCCCCATGTTAGGCAGGATGGTCTCGATCT...GAAAGTTCTTTTCAGGCCAGAACAGCTCTGCACCATCACATATCGTGTTGCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR GCA 90 bp GGGAAACCAGAATTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTTCCAGCACAGAAGGCTaGAAAAGTGGAACTGGCCCC +
Preference number: 2 (lower is better)
Translates to: GKPEFSRLELDTPDDAQGSSTEG*KSGTGP
Trigger: GGGGCCAGTTCCACTTTTGCAGCCTTCTGTGCTGGA...ACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAATTCTGGTTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR GCA 90 bp CCCTCCAAATGGATGTGGGCTCACAGCACATTACTAGTCCCTCTCATGAGTGGTAGGGTGAAGATGCCCTaGCTGGGAACAATGAAACTG +
Preference number: 2 (lower is better)
Translates to: PSKWMWAHSTLLVPLMSGRVKMP*LGTMKL
Trigger: CAGTTTCATTGTTCCCAGGCAGGGCATCTTCACCCT...ACCACTCATGAGAGGGACTAGTAATGTGCTGTGAGCCCACATCCATTTGGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR-3UTR GCA 90 bp GAAAAGCCAATGTCCTCACACCAGCCACTAGGCCCTACACCAGTGGTATCCGTAATTCTATTTCTGGCTTaGCTCTCACCCTTCCCATCC +
Preference number: 2 (lower is better)
Translates to: EKPMSSHQPLGPTPVVSVILFLA*LSPFPS
Trigger: GGATGGGAAGGGTGAGAGGCAAGCCAGAAATAGAAT...TACGGATACCACTGGTGTAGGGCCTAGTGGCTGGTGTGAGGACATTGGCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR-3UTR CCA 90 bp GGGAAACCAGAATTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTTATCCAGTAGATGGCTaGGGGTGCTACTCGCGCTGT +
Preference number: 2 (lower is better)
Translates to: GKPEFSRLELDTPDDAQGYPVDG*GCYSRC
Trigger: ACAGCGCGAGTAGCACCCCCAGCCATCTACTGGATA...ACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAATTCTGGTTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CCA 90 bp GCCGCAACACGATATGTGATGGTGCAGAGCTGTTCTGGCCTGAAAAGAACTTTCAGTTTATCCAGTAGATaGCTGGGGGTGCTACTCGCG +
Preference number: 2 (lower is better)
Translates to: AATRYVMVQSCSGLKRTFSLSSR*LGVLLA
Trigger: CGCGAGTAGCACCCCCAGCCATCTACTGGATAAACT...GAAAGTTCTTTTCAGGCCAGAACAGCTCTGCACCATCACATATCGTGTTGCGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CCA 90 bp CCCTCCAAATGGATGTGGGCTCACAGCACATTACTAGTCCCTCTCATGAGTGGTTCTACAGTCTTCCTGTaGCCACACACTCCTGAGAGA +
Preference number: 2 (lower is better)
Translates to: PSKWMWAHSTLLVPLMSGSTVFL*PHTPER
Trigger: TCTCTCAGGAGTGTGTGGCCACAGGAAGACTGTAGA...ACCACTCATGAGAGGGACTAGTAATGTGCTGTGAGCCCACATCCATTTGGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR-3UTR CCA 90 bp CCCTCCAAATGGATGTGGGCTCACAGCACATTACTAGTCCCTCTCATGAGTGGTCAAAGCAGAATGAAGTaGCTCAGGGTGAAGATGCCC +
Preference number: 2 (lower is better)
Translates to: PSKWMWAHSTLLVPLMSGQSRMK*LRVKMP
Trigger: GGGCATCTTCACCCTGAGCCACTTCATTCTGCTTTG...ACCACTCATGAGAGGGACTAGTAATGTGCTGTGAGCCCACATCCATTTGGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR-3UTR CCA 90 bp GTACAACCAAGGATTGCCCTGCATCTGCATGCCACTCTGATGTCCTGCCAGACAATGACACCTTCTCCGTaGAGCCCTCCCTGTTTAAAA +
Preference number: 2 (lower is better)
Translates to: VQPRIALHLHATLMSCQTMTPSP*SPPCLK
Trigger: TTTTAAACAGGGAGGGCTCCACGGAGAAGGTGTCAT...TGTCTGGCAGGACATCAGAGTGGCATGCAGATGCAGGGCAATCCTTGGTTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR CAA 90 bp TTGGTTAAGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTaGTGGCTTTCCAACGTCTACAGAAAGAATTTAAGCGCCGGTACA +
Preference number: 2 (lower is better)
Translates to: LVKAAPVGGSLQSRS*WLSNVYRKNLSAGT
Trigger: TGTACCGGCGCTTAAATTCTTTCTGTAGACGTTGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCTTAACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR TCA 90 bp TTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTGTTTTCATGACATACTCGCGCTGTCTCTaGGGCCCTCCTTTGCAGACA +
Preference number: 2 (lower is better)
Translates to: FSRLELDTPDDAQGVFMTYSRCL*GPPLQT
Trigger: TGTCTGCAAAGGAGGGCCTCAGAGACAGCGCGAGTA...TGTCATGAAAACACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR TCA 90 bp TTAAGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCACACATCTGTGATCAATaGGAAATCTCACACTGCAGG +
Preference number: 2 (lower is better)
Translates to: LRLLQWEAHCSHVLCGFPHICDQ*EISHCR
Trigger: CCTGCAGTGTGAGATTTCTCATTGATCACAGATGTG...TGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR TCA 90 bp TTAAGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCAAGAAGTCCCATAACCTaGACTACAGACCAAACAGCT +
Preference number: 2 (lower is better)
Translates to: LRLLQWEAHCSHVLCGFPRSPIT*TTDQTA
Trigger: AGCTGTTTGGTCTGTAGTTCAGGTTATGGGACTTCT...TGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR TCA 90 bp CGGCACCCTATATCCTGCCTAGCTCAATACACTAAGTGCTCAAATAAAATACATAGAACACGGCGGGAGTaGGAACACCTGCGCACCCAG +
Preference number: 2 (lower is better)
Translates to: RHPISCLAQYTKCSNKIHRTRRE*EHLRTQ
Trigger: CTGGGTGCGCAGGTGTTCTCACTCCCGCCGTGTTCT...ATGTATTTTATTTGAGCACTTAGTGTATTGAGCTAGGCAGGATATAGGGTGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR GCA 90 bp TTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTGTTTTCATGACAACGAAGGAGTTTGACTaGCTACTCGCTGGCCCAGGG +
Preference number: 2 (lower is better)
Translates to: FSRLELDTPDDAQGVFMTTKEFD*LLAGPG
Trigger: CCCTGGGCCAGCGAGTAGGCAGTCAAACTCCTTCGT...TGTCATGAAAACACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR GCA 90 bp AGTACTTCTAAAAAGCTCAACAGCCTTCCAGGATTGGAGAAGTCCCATAACCTGTCACCAGGCCTGAGCTaGAATGATCCCCCAACTGGC +
Preference number: 2 (lower is better)
Translates to: STSKKLNSLPGLEKSHNLSPGLS*NDPPTG
Trigger: GCCAGTTGGGGGATCATTGCAGCTCAGGCCTGGTGA...CAGGTTATGGGACTTCTCCAATCCTGGAAGGCTGTTGAGCTTTTTAGAAGTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR GCA 90 bp GCCGCAACACGATATGTGATGGTGCAGAGCTGTTCTGGCCTGAAAAGAACTTTCAACAACGCACAGCCTTaGTTAGAAGACGCCAAGGAC +
Preference number: 2 (lower is better)
Translates to: AATRYVMVQSCSGLKRTFNNAQP*LEDAKD
Trigger: GTCCTTGGCGTCTTCTAAGCAAGGCTGTGCGTTGTT...GAAAGTTCTTTTCAGGCCAGAACAGCTCTGCACCATCACATATCGTGTTGCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR GCA 90 bp CACAGCTTTAGGGACACTGAAAAGGAATACTGTATCCACCAAACACACACACAGGGGAGCAGCAGGAAATaGGGTCTGGCCACGTTTCTG +
Preference number: 2 (lower is better)
Translates to: HSFRDTEKEYCIHQTHTQGSSRK*GLATFL
Trigger: CAGAAACGTGGCCAGACCGCATTTCCTGCTGCTCCC...CTGTGTGTGTGTTTGGTGGATACAGTATTCCTTTTCAGTGTCCCTAAAGCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR GCA 90 bp GCCGCAACACGATATGTGATGGTGCAGAGCTGTTCTGGCCTGAAAAGAACTTTCCCTCTCTTGGGTTACTaGCAAAGCCCACAGGTAAAG +
Preference number: 2 (lower is better)
Translates to: AATRYVMVQSCSGLKRTFPLLGY*QSPQVK
Trigger: CTTTACCTGTGGGCTTTGGCAGTAACCCAAGAGAGG...GAAAGTTCTTTTCAGGCCAGAACAGCTCTGCACCATCACATATCGTGTTGCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR GCA 90 bp GTACAACCAAGGATTGCCCTGCATCTGCATGCCACTCTGATGTCCTGCCAGACAGGTGGTAAACTATCCTaGACTTGTCTCCATCTGCAT +
Preference number: 2 (lower is better)
Translates to: VQPRIALHLHATLMSCQTGGKLS*TCLHLH
Trigger: ATGCAGATGGAGACAAGTGCAGGATAGTTTACCACC...TGTCTGGCAGGACATCAGAGTGGCATGCAGATGCAGGGCAATCCTTGGTTGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR-3UTR CCA 90 bp ACACCAGATGATGCCCAAGGTGTTTTCATGACAAGTACCCACACGAGATCTCTTGCAGCTCAAGGCACTTaGTTTGGGAAGCCTGGTCTC +
Preference number: 2 (lower is better)
Translates to: TPDDAQGVFMTSTHTRSLAAQGT*FGKPGL
Trigger: GAGACCAGGCTTCCCAAACCAAGTGCCTTGAGCTGC...AAGAGATCTCGTGTGGGTACTTGTCATGAAAACACCTTGGGCATCATCTGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CCA 90 bp GACAGAGAAAGGAACGGCTCTGGGAAAGCCAAACCTGGCCAAAGTCCAACTTCCGCTGGAGAAAGTACATaGACAACATCTCCTTACACG +
Preference number: 2 (lower is better)
Translates to: DRERNGSGKAKPGQSPTSAGEST*TTSPYT
Trigger: CGTGTAAGGAGATGTTGTCCATGTACTTTCTCCAGC...GGAAGTTGGACTTTGGCCAGGTTTGGCTTTCCCAGAGCCGTTCCTTTCTCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CCA 90 bp AGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCAACGTCACTAGAAATCACCTaGGTACTCCCAAAGAGAAAA +
Preference number: 2 (lower is better)
Translates to: RLLQWEAHCSHVLCGFPTSLEIT*VLPKRK
Trigger: TTTTCTCTTTGGGAGTACCCAGGTGATTTCTAGTGA...CGTTGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CCA 90 bp AGTACTTCTAAAAAGCTCAACAGCCTTCCAGGATTGGAGAAGTCCCATAACCTGGTGACAGTCAGGACCTaGAGACACTCCTGGCCACCT +
Preference number: 2 (lower is better)
Translates to: STSKKLNSLPGLEKSHNLVTVRT*RHSWPP
Trigger: AGGTGGCCAGGAGTGTCTCCAGGTCCTGACTGTCAC...CAGGTTATGGGACTTCTCCAATCCTGGAAGGCTGTTGAGCTTTTTAGAAGTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR-3UTR TCA 90 bp AACACCCTTTCATCATGCAAGGAAGAGACAGAATGTGAGTGTTGGTTTTTGGTAAGGGCTTTCTCCTGGTaGCCAGGAGGGTCCCATTCG +
Preference number: 2 (lower is better)
Translates to: NTLSSCKEETECECWFLVRAFSW*PGGSHS
Trigger: CGAATGGGACCCTCCTGGTCACCAGGAGAAAGCCCT...TACCAAAAACCAACACTCACATTCTGTCTCTTCCTTGCATGATGAAAGGGTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR-3UTR TCA 90 bp GGATTCTTTCACCTGAAAAACGGAGTCCAAATCTGGGGCAGGCAAATAATGAAACAGGCTGGAGCACAGTaGCTCCATCTCTGCAACCTC +
Preference number: 2 (lower is better)
Translates to: GFFHLKNGVQIWGRQIMKQAGAQ*LHLCNL
Trigger: GAGGTTGCAGAGATGGAGTCACTGTGCTCCAGCCTG...TTTCATTATTTGCCTGCCCCAGATTTGGACTCCGTTTTTCAGGTGAAAGAATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR-3UTR TCA 90 bp AGCTCGGGAAATGTTGGCAAAACACCCTTTCATCATGCAAGGAAGAGACAGAATCTGAACCCCACCTGGTaGTCACACCCAGGTCAGAAA +
Preference number: 2 (lower is better)
Translates to: SSGNVGKTPFHHARKRQNLNPTW*SHPGQK
Trigger: TTTCTGACCTGGGTGTGATCACCAGGTGGGGTTCAG...ATTCTGTCTCTTCCTTGCATGATGAAAGGGTGTTTTGCCAACATTTCCCGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR-3UTR TCA 90 bp GCACCTTCTCCACCTTCTGATCCTCTCTTGGGTTACTGCCAAAGCCCACAGGTACACCTTTATAGGTCCTaGATTTACGCAGGTCTAGAA +
Preference number: 2 (lower is better)
Translates to: APSPPSDPLLGYCQSPQVHLYRS*IYAGLE
Trigger: TTCTAGACCTGCGTAAATTCAGGACCTATAAAGGTG...TACCTGTGGGCTTTGGCAGTAACCCAAGAGAGGATCAGAAGGTGGAGAAGGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR-3UTR TCA 90 bp TTTGCAGACATCATGACCGTAAGGCTTTTGGGGCCAGCATCTTCCCAGTTCCCTTGGGGTCCCCGCATTTaGGGTATGTTTATACATGTT +
Preference number: 2 (lower is better)
Translates to: FADIMTVRLLGPASSQFPWGPRI*GMFIHV
Trigger: AACATGTATAAACATACCTCAAATGCGGGGACCCCA...AGGGAACTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR-3UTR TCA 90 bp GTACAACCAAGGATTGCCCTGCATCTGCATGCCACTCTGATGTCCTGCCAGACAAACGAGGTTTGCTGCTaGATTCACAAGACAATGTGT +
Preference number: 2 (lower is better)
Translates to: VQPRIALHLHATLMSCQTNEVCC*IHKTMC
Trigger: ACACATTGTCTTGTGAATTCAGCAGCAAACCTCGTT...TGTCTGGCAGGACATCAGAGTGGCATGCAGATGCAGGGCAATCCTTGGTTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR-3UTR GCA 90 bp GAGATTAGAAAGGGGTTAGAAAGCTCGGGAAATGTTGGCAAAACACCCTTTCATCCCCACCTGCCAGCATaGATAGCTGACCAGTCCCTA +
Preference number: 2 (lower is better)
Translates to: EIRKGLESSGNVGKTPFHPHLPA*IADQSL
Trigger: TAGGGACTGGTCAGCTATGCATGCTGGCAGGTGGGG...ATGAAAGGGTGTTTTGCCAACATTTCCCGAGCTTTCTAACCCCTTTCTAATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR-3UTR GCA 90 bp GGGAAACCAGAATTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTGGTGGGAAGAAACTCTaGTGGATCTACTCACCTGCA +
Preference number: 2 (lower is better)
Translates to: GKPEFSRLELDTPDDAQGGGKKL*WIYSPA
Trigger: TGCAGGTGAGTAGATCCAGCAGAGTTTCTTCCCACC...ACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAATTCTGGTTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR GCA 90 bp ACTGCGTTCTGCACATCACTGTTGCCTGGTTTAACTGCAAACTTTGCTATGAGTCTCACCTCGAACCCATaGGGGATCTTCCAAGAGTGC +
Preference number: 2 (lower is better)
Translates to: TAFCTSLLPGLTANFAMSLTSNP*GIFQEC
Trigger: GCACTCTTGGAAGATCCCGCATGGGTTCGAGGTGAG...ACTCATAGCAAAGTTTGCAGTTAAACCAGGCAACAGTGATGTGCAGAACGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR-3UTR GCA 90 bp GTACAACCAAGGATTGCCCTGCATCTGCATGCCACTCTGATGTCCTGCCAGACACCAAATCCTGGGATTTaGATGGCTTTATCTGGAAAG +
Preference number: 2 (lower is better)
Translates to: VQPRIALHLHATLMSCQTPNPGI*MALSGK
Trigger: CTTTCCAGATAAAGCCATGCAAATCCCAGGATTTGG...TGTCTGGCAGGACATCAGAGTGGCATGCAGATGCAGGGCAATCCTTGGTTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR-3UTR CCA 90 bp GACAGAGAAAGGAACGGCTCTGGGAAAGCCAAACCTGGCCAAAGTCCAACTTCCGTGCCTAATGACTTGTaGAGCACTTCAAAAACTGAG +
Preference number: 2 (lower is better)
Translates to: DRERNGSGKAKPGQSPTSVPNDL*STSKTE
Trigger: CTCAGTTTTTGAAGTGCTCCACAAGTCATTAGGCAC...GGAAGTTGGACTTTGGCCAGGTTTGGCTTTCCCAGAGCCGTTCCTTTCTCTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CCA 90 bp CACAGCTTTAGGGACACTGAAAAGGAATACTGTATCCACCAAACACACACACAGTCCAACCTGGGAGGGTaGAATTTCGGCTCACCTGGA +
Preference number: 2 (lower is better)
Translates to: HSFRDTEKEYCIHQTHTQSNLGG*NFGSPG
Trigger: TCCAGGTGAGCCGAAATTCCACCCTCCCAGGTTGGA...CTGTGTGTGTGTTTGGTGGATACAGTATTCCTTTTCAGTGTCCCTAAAGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CCA 90 bp CTTTCACCTGAAAAACGGAGTCCAAATCTGGGGCAGGCAAATAATGAAACCCTCAAAGAGTTCACACGGTaGCTGGCACTCAGGCACACA +
Preference number: 2 (lower is better)
Translates to: LSPEKRSPNLGQANNETLKEFTR*LALRHT
Trigger: TGTGTGCCTGAGTGCCAGCCACCGTGTGAACTCTTT...GAGGGTTTCATTATTTGCCTGCCCCAGATTTGGACTCCGTTTTTCAGGTGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR-3UTR TCA 90 bp CACAGCTTTAGGGACACTGAAAAGGAATACTGTATCCACCAAACACACACACAGCAGCCTCTTCATTTCTaGGACCTGCAGACACAACCC +
Preference number: 2 (lower is better)
Translates to: HSFRDTEKEYCIHQTHTQQPLHF*DLQTQP
Trigger: GGGTTGTGTCTGCAGGTCTCAGAAATGAAGAGGCTG...CTGTGTGTGTGTTTGGTGGATACAGTATTCCTTTTCAGTGTCCCTAAAGCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR TCA 90 bp AGCTCGGGAAATGTTGGCAAAACACCCTTTCATCATGCAAGGAAGAGACAGAATCAGCCTCTTCATTTCTaGGACCTGCAGACACAACCC +
Preference number: 2 (lower is better)
Translates to: SSGNVGKTPFHHARKRQNQPLHF*DLQTQP
Trigger: GGGTTGTGTCTGCAGGTCTCAGAAATGAAGAGGCTG...ATTCTGTCTCTTCCTTGCATGATGAAAGGGTGTTTTGCCAACATTTCCCGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR-3UTR TCA 90 bp CACAGCTTTAGGGACACTGAAAAGGAATACTGTATCCACCAAACACACACACAGAGTTGGACTGAAAGGTaGGGTCACTCCACACCTAGG +
Preference number: 2 (lower is better)
Translates to: HSFRDTEKEYCIHQTHTQSWTER*GHSTPR
Trigger: CCTAGGTGTGGAGTGACCTCACCTTTCAGTCCAACT...CTGTGTGTGTGTTTGGTGGATACAGTATTCCTTTTCAGTGTCCCTAAAGCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR-3UTR GCA 90 bp TTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTGTTTTCATGACAAGAGAGGCAACAGCCTaGAGTTTGCCAAGTCCAGCT +
Preference number: 2 (lower is better)
Translates to: FSRLELDTPDDAQGVFMTREATA*SLPSPA
Trigger: AGCTGGACTTGGCAAACTGCAGGCTGTTGCCTCTCT...TGTCATGAAAACACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR-3UTR CCA 90 bp AGCTCGGGAAATGTTGGCAAAACACCCTTTCATCATGCAAGGAAGAGACAGAATTTGTTCCACCGGCCTTaGGGACGAAGGAGTTTGACT +
Preference number: 2 (lower is better)
Translates to: SSGNVGKTPFHHARKRQNLFHRP*GRRSLT
Trigger: AGTCAAACTCCTTCGTCCCCAAGGCCGGTGGAACAA...ATTCTGTCTCTTCCTTGCATGATGAAAGGGTGTTTTGCCAACATTTCCCGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR-3UTR CCA 90 bp CTACAGACCAAACAGCTAAGCCGCAACACGATATGTGATGGTGCAGAGCTGTTCGCTGGAGAAAGTACATaGACAACATCTCCTTACACG +
Preference number: 2 (lower is better)
Translates to: LQTKQLSRNTICDGAELFAGEST*TTSPYT
Trigger: CGTGTAAGGAGATGTTGTCCATGTACTTTCTCCAGC...GAACAGCTCTGCACCATCACATATCGTGTTGCGGCTTAGCTGTTTGGTCTGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CCA 90 bp TCTAGAGTTGGTGGGAAGAAACTCTGCTGGATCTACTCACCTGCAGATCTTCCACTTCCCCACACACTTTaGTTTCTTTGTGGCAGCAAC +
Preference number: 2 (lower is better)
Translates to: SRVGGKKLCWIYSPADLPLPHTL*FLCGSN
Trigger: GTTGCTGCCACAAAGAAACCAAAGTGTGTGGGGAAG...TGGAAGATCTGCAGGTGAGTAGATCCAGCAGAGTTTCTTCCCACCAACTCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CCA 90 bp TCTAGAGTTGGTGGGAAGAAACTCTGCTGGATCTACTCACCTGCAGATCTTCCAGGTGCAGAGCTGTTCTaGCCTGAAAAGAACTTTCCA +
Preference number: 2 (lower is better)
Translates to: SRVGGKKLCWIYSPADLPGAELF*PEKNFP
Trigger: TGGAAAGTTCTTTTCAGGCCAGAACAGCTCTGCACC...TGGAAGATCTGCAGGTGAGTAGATCCAGCAGAGTTTCTTCCCACCAACTCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CCA 90 bp GCACCTTCTCCACCTTCTGATCCTCTCTTGGGTTACTGCCAAAGCCCACAGGTAAGTCATAGTGTCCTTTaGATTCCTAACAGATGTGAC +
Preference number: 2 (lower is better)
Translates to: APSPPSDPLLGYCQSPQVSHSVL*IPNRCD
Trigger: GTCACATCTGTTAGGAATCCAAAGGACACTATGACT...TACCTGTGGGCTTTGGCAGTAACCCAAGAGAGGATCAGAAGGTGGAGAAGGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR CAA 90 bp CTCACGGGAAATCACTGTTTCATAAAGAAGGAGGGGAGTAGACCATaGGGTTTAAAAGATGATGTCCAACCTGGGAGGGTGGAATTTCGG +
Preference number: 2 (lower is better)
Translates to: LTGNHCFIKKEGSRP*GLKDDVQPGRVEFR
Trigger: CCGAAATTCCACCCTCCCAGGTTGGACATCATCTTTTAAACCCAATGGTCTACTCCCCTCCTTCTTTATGAAACAGTGATTTCCCGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR TCA 90 bp AAGACTCAAGAAGCAACAAGAGAAATTCTGGCACACGTGCCCAAGAGAGGTTTAAATTCCGGTCTCCAGTaGAGGCTGTACTTGGTGCAT +
Preference number: 2 (lower is better)
Translates to: KTQEATREILAHVPKRGLNSGLQ*RLYLVH
Trigger: ATGCACCAAGTACAGCCTTCACTGGAGACCGGAATT...TAAACCTCTCTTGGGCACGTGTGCCAGAATTTCTCTTGTTGCTTCTTGAGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR TCA 90 bp AACACCCTTTCATCATGCAAGGAAGAGACAGAATGTGAGTGTTGGTTTTTGGTAGCCAGCATGCATAGCTaGCCAGTCCCTAATGCCACA +
Preference number: 2 (lower is better)
Translates to: NTLSSCKEETECECWFLVASMHS*PVPNAT
Trigger: TGTGGCATTAGGGACTGGTCAGCTATGCATGCTGGC...TACCAAAAACCAACACTCACATTCTGTCTCTTCCTTGCATGATGAAAGGGTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR-3UTR TCA 90 bp GCCGCAACACGATATGTGATGGTGCAGAGCTGTTCTGGCCTGAAAAGAACTTTCGCTAAAACAGGGAGATaGCACAAAATTGGGTCACTA +
Preference number: 2 (lower is better)
Translates to: AATRYVMVQSCSGLKRTFAKTGR*HKIGSL
Trigger: TAGTGACCCAATTTTGTGTCATCTCCCTGTTTTAGC...GAAAGTTCTTTTCAGGCCAGAACAGCTCTGCACCATCACATATCGTGTTGCGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR TCA 90 bp TCTAGAGTTGGTGGGAAGAAACTCTGCTGGATCTACTCACCTGCAGATCTTCCAAGAAGTCCCATAACCTaGACTACAGACCAAACAGCT +
Preference number: 2 (lower is better)
Translates to: SRVGGKKLCWIYSPADLPRSPIT*TTDQTA
Trigger: AGCTGTTTGGTCTGTAGTTCAGGTTATGGGACTTCT...TGGAAGATCTGCAGGTGAGTAGATCCAGCAGAGTTTCTTCCCACCAACTCTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR TCA 90 bp CGGCACCCTATATCCTGCCTAGCTCAATACACTAAGTGCTCAAATAAAATACATGGGGGAAGCGAGATGTaGAGTAGCACACGAAGTCGT +
Preference number: 2 (lower is better)
Translates to: RHPISCLAQYTKCSNKIHGGSEM*SSTRSR
Trigger: ACGACTTCGTGTGCTACTTCACATCTCGCTTCCCCC...ATGTATTTTATTTGAGCACTTAGTGTATTGAGCTAGGCAGGATATAGGGTGCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR-3UTR TCA 90 bp AAAAGGGTTTGCCTGTTTTGTTCACTTGCTGTATCCTCAGGACCTAGAGTAGCAGAGGTGAGCAGTGAGTaGGCAAGCAAAGCTTCATCT +
Preference number: 2 (lower is better)
Translates to: KRVCLFCSLAVSSGPRVAEVSSE*ASKASS
Trigger: AGATGAAGCTTTGCTTGCTCACTCACTGCTCACCTC...TGCTACTCTAGGTCCTGAGGATACAGCAAGTGAACAAAACAGGCAAACCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR-3UTR GCA 90 bp AGCTCGGGAAATGTTGGCAAAACACCCTTTCATCATGCAAGGAAGAGACAGAATTTCATTTCTGAGACCTaGAGACACAACCCCACCTGC +
Preference number: 2 (lower is better)
Translates to: SSGNVGKTPFHHARKRQNFISET*RHNPTC
Trigger: GCAGGTGGGGTTGTGTCTGCAGGTCTCAGAAATGAA...ATTCTGTCTCTTCCTTGCATGATGAAAGGGTGTTTTGCCAACATTTCCCGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR-3UTR GCA 90 bp AGTACTTCTAAAAAGCTCAACAGCCTTCCAGGATTGGAGAAGTCCCATAACCTGAACAACGCACAGCCTTaGTTAGAAGACGCCAAGGAC +
Preference number: 2 (lower is better)
Translates to: STSKKLNSLPGLEKSHNLNNAQP*LEDAKD
Trigger: GTCCTTGGCGTCTTCTAAGCAAGGCTGTGCGTTGTT...CAGGTTATGGGACTTCTCCAATCCTGGAAGGCTGTTGAGCTTTTTAGAAGTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR GCA 90 bp CGTTTTGGATCTGGTAGCCTAAAGTCTCAACTCATAATGAGTCAATGTCTGGCTGCACACACATGTCAGTaGTCTACTGGGACACCTGGT +
Preference number: 2 (lower is better)
Translates to: RFGSGSLKSQLIMSQCLAAHTCQ*STGTPG
Trigger: ACCAGGTGTCCCAGTAGAGCACTGACATGTGTGTGC...AGCCAGACATTGACTCATTATGAGTTGAGACTTTAGGCTACCAGATCCAAAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR-3UTR GCA 90 bp AAAAGGGTTTGCCTGTTTTGTTCACTTGCTGTATCCTCAGGACCTAGAGTAGCAGACGAAAGAGAACGATaGTGTTCAGACCCGAACCTC +
Preference number: 2 (lower is better)
Translates to: KRVCLFCSLAVSSGPRVADERER*CSDPNL
Trigger: GAGGTTCGGGTCTGAACAGCATCGTTCTCTTTCGTC...TGCTACTCTAGGTCCTGAGGATACAGCAAGTGAACAAAACAGGCAAACCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR-3UTR CCA 90 bp CACAGCTTTAGGGACACTGAAAAGGAATACTGTATCCACCAAACACACACACAGGATCCCCCAACTGGCTaGAGAAAGTACATGGACAAC +
Preference number: 2 (lower is better)
Translates to: HSFRDTEKEYCIHQTHTQDPPTG*RKYMDN
Trigger: GTTGTCCATGTACTTTCTCCAGCCAGTTGGGGGATC...CTGTGTGTGTGTTTGGTGGATACAGTATTCCTTTTCAGTGTCCCTAAAGCTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CCA 90 bp CACAGCTTTAGGGACACTGAAAAGGAATACTGTATCCACCAAACACACACACAGGAATTTCGGCTCACCTaGAGAGGATGCCTGATGACT +
Preference number: 2 (lower is better)
Translates to: HSFRDTEKEYCIHQTHTQEFRLT*RGCLMT
Trigger: AGTCATCAGGCATCCTCTCCAGGTGAGCCGAAATTC...CTGTGTGTGTGTTTGGTGGATACAGTATTCCTTTTCAGTGTCCCTAAAGCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CCA 90 bp CGGCACCCTATATCCTGCCTAGCTCAATACACTAAGTGCTCAAATAAAATACATCTCAAACCTGACAGGTaGGATGTGGGGCCTGAACAG +
Preference number: 2 (lower is better)
Translates to: RHPISCLAQYTKCSNKIHLKPDR*DVGPEQ
Trigger: CTGTTCAGGCCCCACATCCCACCTGTCAGGTTTGAG...ATGTATTTTATTTGAGCACTTAGTGTATTGAGCTAGGCAGGATATAGGGTGCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR-3UTR CCA 90 bp GTACAACCAAGGATTGCCCTGCATCTGCATGCCACTCTGATGTCCTGCCAGACACATGCAAGTGTAGTGTaGCATGTTTCTTATGAGAAT +
Preference number: 2 (lower is better)
Translates to: VQPRIALHLHATLMSCQTHASVV*HVSYEN
Trigger: ATTCTCATAAGAAACATGCCACACTACACTTGCATG...TGTCTGGCAGGACATCAGAGTGGCATGCAGATGCAGGGCAATCCTTGGTTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR CAA 90 bp TTCTCTCTCATCACAAGTTTTAGGAAAGCAGAAGTTTTGCCTGTCTaGTTCATCGCTGTATCTCCGGCACCCTATATCCTGCCTAGCTCA +
Preference number: 2 (lower is better)
Translates to: FSLITSFRKAEVLPV*FIAVSPAPYILPSS
Trigger: TGAGCTAGGCAGGATATAGGGTGCCGGAGATACAGCGATGAACAAGACAGGCAAAACTTCTGCTTTCCTAAAACTTGTGATGAGAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR TCA 90 bp GGGAAACCAGAATTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTATACATGAACACTCTTaGGGGGATGGTGATTTTTGG +
Preference number: 2 (lower is better)
Translates to: GKPEFSRLELDTPDDAQGIHEHS*GDGDFW
Trigger: CCAAAAATCACCATCCCCTCAAGAGTGTTCATGTAT...ACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAATTCTGGTTTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR TCA 90 bp AAGACTCAAGAAGCAACAAGAGAAATTCTGGCACACGTGCCCAAGAGAGGTTTAAGAGCTGTTCTGGCCTaGAAAGAACTTTCCACTTGC +
Preference number: 2 (lower is better)
Translates to: KTQEATREILAHVPKRGLRAVLA*KELSTC
Trigger: GCAAGTGGAAAGTTCTTTTCAGGCCAGAACAGCTCT...TAAACCTCTCTTGGGCACGTGTGCCAGAATTTCTCTTGTTGCTTCTTGAGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR TCA 90 bp AAAAGGGTTTGCCTGTTTTGTTCACTTGCTGTATCCTCAGGACCTAGAGTAGCATCCAGGCCTCACTCCTaGCTGAACTCAATTCATTCA +
Preference number: 2 (lower is better)
Translates to: KRVCLFCSLAVSSGPRVASRPHS*LNSIHS
Trigger: TGAATGAATTGAGTTCAGTCAGGAGTGAGGCCTGGA...TGCTACTCTAGGTCCTGAGGATACAGCAAGTGAACAAAACAGGCAAACCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR-3UTR GCA 90 bp GAAAAGCCAATGTCCTCACACCAGCCACTAGGCCCTACACCAGTGGTATCCGTAAAAACTCAGGGTATCTaGACATTACCATCTTTAATC +
Preference number: 2 (lower is better)
Translates to: EKPMSSHQPLGPTPVVSVKTQGI*TLPSLI
Trigger: GATTAAAGATGGTAATGTGCAGATACCCTGAGTTTT...TACGGATACCACTGGTGTAGGGCCTAGTGGCTGGTGTGAGGACATTGGCTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR-3UTR CCA 90 bp AGTACTTCTAAAAAGCTCAACAGCCTTCCAGGATTGGAGAAGTCCCATAACCTGCTTCCCCACACACTTTaGTTTCTTTGTGGCAGCAAC +
Preference number: 2 (lower is better)
Translates to: STSKKLNSLPGLEKSHNLLPHTL*FLCGSN
Trigger: GTTGCTGCCACAAAGAAACCAAAGTGTGTGGGGAAG...CAGGTTATGGGACTTCTCCAATCCTGGAAGGCTGTTGAGCTTTTTAGAAGTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CCA 90 bp CACAGCTTTAGGGACACTGAAAAGGAATACTGTATCCACCAAACACACACACAGGGTGCAGAGCTGTTCTaGCCTGAAAAGAACTTTCCA +
Preference number: 2 (lower is better)
Translates to: HSFRDTEKEYCIHQTHTQGAELF*PEKNFP
Trigger: TGGAAAGTTCTTTTCAGGCCAGAACAGCTCTGCACC...CTGTGTGTGTGTTTGGTGGATACAGTATTCCTTTTCAGTGTCCCTAAAGCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CCA 90 bp TCTAGAGTTGGTGGGAAGAAACTCTGCTGGATCTACTCACCTGCAGATCTTCCAGTGCCTAATGACTTGTaGAGCACTTCAAAAACTGAG +
Preference number: 2 (lower is better)
Translates to: SRVGGKKLCWIYSPADLPVPNDL*STSKTE
Trigger: CTCAGTTTTTGAAGTGCTCCACAAGTCATTAGGCAC...TGGAAGATCTGCAGGTGAGTAGATCCAGCAGAGTTTCTTCCCACCAACTCTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CCA 90 bp AGTACTTCTAAAAAGCTCAACAGCCTTCCAGGATTGGAGAAGTCCCATAACCTGCATGTTTACACACAGTaGCTGCATCAGACAGGGAGA +
Preference number: 2 (lower is better)
Translates to: STSKKLNSLPGLEKSHNLHVYTQ*LHQTGR
Trigger: TCTCCCTGTCTGATGCAGCCACTGTGTGTAAACATG...CAGGTTATGGGACTTCTCCAATCCTGGAAGGCTGTTGAGCTTTTTAGAAGTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR-3UTR CCA 90 bp GTACAACCAAGGATTGCCCTGCATCTGCATGCCACTCTGATGTCCTGCCAGACAAACAACCCAATAAAGTaGTTAACTTGGATGAATGTC +
Preference number: 2 (lower is better)
Translates to: VQPRIALHLHATLMSCQTNNPIK*LTWMNV
Trigger: GACATTCATCCAAGTTAACCACTTTATTGGGTTGTT...TGTCTGGCAGGACATCAGAGTGGCATGCAGATGCAGGGCAATCCTTGGTTGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR-3UTR TCA 90 bp AACACCCTTTCATCATGCAAGGAAGAGACAGAATGTGAGTGTTGGTTTTTGGTAAATTCCGGTCTCCAGTaGAGGCTGTACTTGGTGCAT +
Preference number: 2 (lower is better)
Translates to: NTLSSCKEETECECWFLVNSGLQ*RLYLVH
Trigger: ATGCACCAAGTACAGCCTTCACTGGAGACCGGAATT...TACCAAAAACCAACACTCACATTCTGTCTCTTCCTTGCATGATGAAAGGGTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR-3UTR TCA 90 bp AGCTCGGGAAATGTTGGCAAAACACCCTTTCATCATGCAAGGAAGAGACAGAATCACATCTGTGATCAATaGGAAATCTCACACTGCAGG +
Preference number: 2 (lower is better)
Translates to: SSGNVGKTPFHHARKRQNHICDQ*EISHCR
Trigger: CCTGCAGTGTGAGATTTCTCATTGATCACAGATGTG...ATTCTGTCTCTTCCTTGCATGATGAAAGGGTGTTTTGCCAACATTTCCCGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR-3UTR TCA 90 bp ACACCAGATGATGCCCAAGGTGTTTTCATGACAAGTACCCACACGAGATCTCTTAGAATGTTCTATACATaGACACTCTTGAGGGGATGG +
Preference number: 2 (lower is better)
Translates to: TPDDAQGVFMTSTHTRSLRMFYT*TLLRGW
Trigger: CCATCCCCTCAAGAGTGTTCATGTATAGAACATTCT...AAGAGATCTCGTGTGGGTACTTGTCATGAAAACACCTTGGGCATCATCTGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR TCA 90 bp ACAGAACACGGACAAATTTGCCACGCTCACATCCTGAACAATACATTTTGTGAATTTCATTTGAGGTTCTaGAGCGGCCTCACCTCGAAC +
Preference number: 2 (lower is better)
Translates to: TEHGQICHAHILNNTFCEFHLRF*SGLTSN
Trigger: GTTCGAGGTGAGGCCGCTTCAGAACCTCAAATGAAA...TTCACAAAATGTATTGTTCAGGATGTGAGCGTGGCAAATTTGTCCGTGTTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR-3UTR TCA 90 bp AATAAGACACACACTGAAAGAAAATCACAGTATTGCCTCCAATGCAATAGTTACAGGCGGAGGTTGCAGTaGGCTGAGACCACACCATTG +
Preference number: 2 (lower is better)
Translates to: NKTHTERKSQYCLQCNSYRRRLQ*AETTPL
Trigger: CAATGGTGTGGTCTCAGCTCACTGCAACCTCCGCCT...GTAACTATTGCATTGGAGGCAATACTGTGATTTTCTTTCAGTGTGTGTCTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR-3UTR TCA 90 bp GAACCTGTAATAAAACACTCTACAGTCTTCCTGTGGCCACACACTCCTGAGAGAGAACCTCGGGCCAAATaGGATTTATTACTAGACAGA +
Preference number: 2 (lower is better)
Translates to: EPVIKHSTVFLWPHTPEREPRAK*DLLLDR
Trigger: TCTGTCTAGTAATAAATCTCATTTGGCCCGAGGTTC...TCTCTCAGGAGTGTGTGGCCACAGGAAGACTGTAGAGTGTTTTATTACAGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR-3UTR GCA 90 bp AGTACTTCTAAAAAGCTCAACAGCCTTCCAGGATTGGAGAAGTCCCATAACCTGGGAAAGCAGAAGTTTTaGCTGTCTTGTTCATCGCTG +
Preference number: 2 (lower is better)
Translates to: STSKKLNSLPGLEKSHNLGKQKF*LSCSSL
Trigger: CAGCGATGAACAAGACAGGCAAAACTTCTGCTTTCC...CAGGTTATGGGACTTCTCCAATCCTGGAAGGCTGTTGAGCTTTTTAGAAGTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR GCA 90 bp GCCGCAACACGATATGTGATGGTGCAGAGCTGTTCTGGCCTGAAAAGAACTTTCCAATTAATCTCTCACTaGAGCAAGAAAAGAATTGCC +
Preference number: 2 (lower is better)
Translates to: AATRYVMVQSCSGLKRTFQLISH*SKKRIA
Trigger: GGCAATTCTTTTCTTGCTGCAGTGAGAGATTAATTG...GAAAGTTCTTTTCAGGCCAGAACAGCTCTGCACCATCACATATCGTGTTGCGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR GCA 90 bp TCTGTGATCAATGAGAAATCTCACACTGCAGGACGACACCCTCTGAACTCCGTCCCAGCATTTACAAACTaGTTACCTTATTTCTCATGG +
Preference number: 2 (lower is better)
Translates to: SVINEKSHTAGRHPLNSVPAFTN*LPYFSW
Trigger: CCATGAGAAATAAGGTAAGCAGTTTGTAAATGCTGG...GACGGAGTTCAGAGGGTGTCGTCCTGCAGTGTGAGATTTCTCATTGATCACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR-3UTR CCA 90 bp AAAAGGGTTTGCCTGTTTTGTTCACTTGCTGTATCCTCAGGACCTAGAGTAGCAAGCTGCCATCATCTATaGATGGTAACGAGGTTTGCT +
Preference number: 2 (lower is better)
Translates to: KRVCLFCSLAVSSGPRVASCHHL*MVTRFA
Trigger: AGCAAACCTCGTTACCATCCATAGATGATGGCAGCT...TGCTACTCTAGGTCCTGAGGATACAGCAAGTGAACAAAACAGGCAAACCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR-3UTR TCA 90 bp AAGACTCAAGAAGCAACAAGAGAAATTCTGGCACACGTGCCCAAGAGAGGTTTAGCTAAAACAGGGAGATaGCACAAAATTGGGTCACTA +
Preference number: 2 (lower is better)
Translates to: KTQEATREILAHVPKRGLAKTGR*HKIGSL
Trigger: TAGTGACCCAATTTTGTGTCATCTCCCTGTTTTAGC...TAAACCTCTCTTGGGCACGTGTGCCAGAATTTCTCTTGTTGCTTCTTGAGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR TCA 90 bp ACAGAACACGGACAAATTTGCCACGCTCACATCCTGAACAATACATTTTGTGAACCCCAAATCCACAGCTaGGTGAAGGTCATAAAGAGT +
Preference number: 2 (lower is better)
Translates to: TEHGQICHAHILNNTFCEPQIHS*VKVIKS
Trigger: ACTCTTTATGACCTTCACTCAGCTGTGGATTTGGGG...TTCACAAAATGTATTGTTCAGGATGTGAGCGTGGCAAATTTGTCCGTGTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR-3UTR TCA 90 bp TCTGCTAGTTACCACCAGGAAGATCAGATCATAACATGGACGCATGGTATGTTAGCTATAAACGTCCTTTaGGCAGAATGCCTTTTCCTC +
Preference number: 2 (lower is better)
Translates to: SASYHQEDQIITWTHGMLAINVL*AECLFL
Trigger: GAGGAAAAGGCATTCTGCTCAAAGGACGTTTATAGC...TAACATACCATGCGTCCATGTTATGATCTGATCTTCCTGGTGGTAACTAGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR-3UTR TCA 90 bp AAAAGGGTTTGCCTGTTTTGTTCACTTGCTGTATCCTCAGGACCTAGAGTAGCATCACAAGACAATGTGTaGCCTTCTGACATATGCCAA +
Preference number: 2 (lower is better)
Translates to: KRVCLFCSLAVSSGPRVASQDNV*PSDICQ
Trigger: TTGGCATATGTCAGAAGGTCACACATTGTCTTGTGA...TGCTACTCTAGGTCCTGAGGATACAGCAAGTGAACAAAACAGGCAAACCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR-3UTR GCA 90 bp TGGTGCCTTCTTTCACATGTTAGCTGTCCCCATTTCACCTATCAGGAAGGAGTCGTTGCCTGGTTTAACTaGAAACTTTGCTATGAGTTT +
Preference number: 2 (lower is better)
Translates to: WCLLSHVSCPHFTYQEGVVAWFN*KLCYEF
Trigger: AAACTCATAGCAAAGTTTGCAGTTAAACCAGGCAAC...GACTCCTTCCTGATAGGTGAAATGGGGACAGCTAACATGTGAAAGAAGGCACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR-3UTR CCA 90 bp CAAAATATTGAACCTACATATTACTTTGGATCCCGAAACCAAAGAGGTTTCCTAAGTTCACACGGTGGCTaGCACTCAGGCACACACATG +
Preference number: 2 (lower is better)
Translates to: QNIEPTYYFGSRNQRGFLSSHGG*HSGTHM
Trigger: CATGTGTGTGCCTGAGTGCCAGCCACCGTGTGAACT...TAGGAAACCTCTTTGGTTTCGGGATCCAAAGTAATATGTAGGTTCAATATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR-3UTR TCA 90 bp AAGACTCAAGAAGCAACAAGAGAAATTCTGGCACACGTGCCCAAGAGAGGTTTATCTACAAAGGCAGAATaGGAGCTTTTGATGAGTAAC +
Preference number: 2 (lower is better)
Translates to: KTQEATREILAHVPKRGLSTKAE*ELLMSN
Trigger: GTTACTCATCAAAAGCTCTCATTCTGCCTTTGTAGA...TAAACCTCTCTTGGGCACGTGTGCCAGAATTTCTCTTGTTGCTTCTTGAGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR TCA 90 bp AGTACTTCTAAAAAGCTCAACAGCCTTCCAGGATTGGAGAAGTCCCATAACCTGGGAAGAGACAGAATGTaGGTGTTGGTTTTTGGTAAA +
Preference number: 2 (lower is better)
Translates to: STSKKLNSLPGLEKSHNLGRDRM*VLVFGK
Trigger: TTTACCAAAAACCAACACTCACATTCTGTCTCTTCC...CAGGTTATGGGACTTCTCCAATCCTGGAAGGCTGTTGAGCTTTTTAGAAGTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR-3UTR GCA 90 bp ACAGAACACGGACAAATTTGCCACGCTCACATCCTGAACAATACATTTTGTGAAGTCCTTACTCCCTGTTaGATTCGTTCCCCAAAGTTT +
Preference number: 2 (lower is better)
Translates to: TEHGQICHAHILNNTFCEVLTPC*IRSPKF
Trigger: AAACTTTGGGGAACGAATGCAACAGGGAGTAAGGAC...TTCACAAAATGTATTGTTCAGGATGTGAGCGTGGCAAATTTGTCCGTGTTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR-3UTR GCA 90 bp GGATTCTTTCACCTGAAAAACGGAGTCCAAATCTGGGGCAGGCAAATAATGAAATCGTTTGTGAACAGATaGCAGGCAGTAGTTACCAAT +
Preference number: 2 (lower is better)
Translates to: GFFHLKNGVQIWGRQIMKSFVNR*QAVVTN
Trigger: ATTGGTAACTACTGCCTGGCATCTGTTCACAAACGA...TTTCATTATTTGCCTGCCCCAGATTTGGACTCCGTTTTTCAGGTGAAAGAATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR-3UTR CCA 90 bp GGATTCTTTCACCTGAAAAACGGAGTCCAAATCTGGGGCAGGCAAATAATGAAACACATCACTGTTGCCTaGTTTAACTGCAAACTTTGC +
Preference number: 2 (lower is better)
Translates to: GFFHLKNGVQIWGRQIMKHITVA*FNCKLC
Trigger: GCAAAGTTTGCAGTTAAACCAGGCAACAGTGATGTG...TTTCATTATTTGCCTGCCCCAGATTTGGACTCCGTTTTTCAGGTGAAAGAATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR-3UTR CCA 90 bp GAGATTAGAAAGGGGTTAGAAAGCTCGGGAAATGTTGGCAAAACACCCTTTCATAAAGAAAACAATTCATaGGGTCCTGGGATTAGGGAG +
Preference number: 2 (lower is better)
Translates to: EIRKGLESSGNVGKTPFHKENNS*GPGIRE
Trigger: CTCCCTAATCCCAGGACCCCATGAATTGTTTTCTTT...ATGAAAGGGTGTTTTGCCAACATTTCCCGAGCTTTCTAACCCCTTTCTAATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR-3UTR TCA 90 bp CGGCACCCTATATCCTGCCTAGCTCAATACACTAAGTGCTCAAATAAAATACATCTCTTGAGGGGATGGTaGTTTTTGGTACCACAAAAA +
Preference number: 2 (lower is better)
Translates to: RHPISCLAQYTKCSNKIHLLRGW*FLVPQK
Trigger: TTTTTGTGGTACCAAAAATCACCATCCCCTCAAGAG...ATGTATTTTATTTGAGCACTTAGTGTATTGAGCTAGGCAGGATATAGGGTGCCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR CAA 90 bp TCAGGTTTGTCTGATTTTATACCCACTGCGTTCTGCACATCACTGTaGCCTGGTTTAACTGCAAACTTTGCTATGAGTTTCATTTACAAT +
Preference number: 2 (lower is better)
Translates to: SGLSDFIPTAFCTSL*PGLTANFAMSFIYN
Trigger: ATTGTAAATGAAACTCATAGCAAAGTTTGCAGTTAAACCAGGCAACAGTGATGTGCAGAACGCAGTGGGTATAAAATCAGACAAACCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR CAA 90 bp ATTAAAAGGCTTAAATGTGATGGAGATACAGTACAGATGATGTTCTaGGAACCTGTAATAAAACACTCTACAGTCTTCCTGTGGCCACAC +
Preference number: 2 (lower is better)
Translates to: IKRLKCDGDTVQMMF*EPVIKHSTVFLWPH
Trigger: GTGTGGCCACAGGAAGACTGTAGAGTGTTTTATTACAGGTTCCAAGAACATCATCTGTACTGTATCTCCATCACATTTAAGCCTTTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR CAA 90 bp AAGACATGCCCTAACATTCCACAGCCAAAGTGTTTCTCTCAATTCTaGTGTGATTTGTTGATTTTCATCTCTGGACAAAATAGGAAATCC +
Preference number: 2 (lower is better)
Translates to: KTCPNIPQPKCFSQF*CDLLIFISGQNRKS
Trigger: GGATTTCCTATTTTGTCCAGAGATGAAAATCAACAAATCACACAAGAATTGAGAGAAACACTTTGGCTGTGGAATGTTAGGGCATGTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR CAA 90 bp GGATTAACAAAAGACAGCCTCAAGTGCTTAATAATACCAATGTTATaGCGTTTTGGATCTGGTAGCCTAAAGTCTCAACTCATAATGAGT +
Preference number: 2 (lower is better)
Translates to: GLTKDSLKCLIIPML*RFGSGSLKSQLIMS
Trigger: ACTCATTATGAGTTGAGACTTTAGGCTACCAGATCCAAAACGCAATAACATTGGTATTATTAAGCACTTGAGGCTGTCTTTTGTTAATCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR GCA 72 bp CCTCAGGCCGGGGCCTTCTGGGACCCCCAAGTGCCGTaGAGGACGCCACGAAGTTGCGCCCGAGCCCGCGGG +
Preference number: 3 (lower is better)
Translates to: PQAGAFWDPQVP*RTPRSCARARG
Trigger: CCCGCGGGCTCGGGCGCAACTTCGTGGCGTCCTGCACGGCACTTGGGGGTCCCAGAAGGCCCCGGCCTGAGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR CCA 72 bp TGGCTTGGGAGGCTCTTCGGGCGGCCGACGCCTCGGTaGGGCCGCGACTCCCGTCAGGGAAGCTCTCCCGGC +
Preference number: 3 (lower is better)
Translates to: WLGRLFGRPTPR*GRDSRQGSSPG
Trigger: GCCGGGAGAGCTTCCCTGACGGGAGTCGCGGCCCCACCGAGGCGTCGGCCGCCCGAAGAGCCTCCCAAGCCA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR GCA 72 bp GGCCTCCTCAGGCCGGGGCCTTCTGGGACCCCCAAGTaGCGTGCAGGACGCCACGAAGTTGCGCCCGAGCCC +
Preference number: 3 (lower is better)
Translates to: GLLRPGPSGTPK*RAGRHEVAPEP
Trigger: GGGCTCGGGCGCAACTTCGTGGCGTCCTGCACGGCACTTGGGGGTCCCAGAAGGCCCCGGCCTGAGGAGGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR CCA 72 bp CCCGCAGGTGGGCGGCCTCCTCAGGCCGGGGCCTTCTaGGACCCCCAAGTGCCGTGCAGGACGCCACGAAGT +
Preference number: 3 (lower is better)
Translates to: PAGGRPPQAGAF*DPQVPCRTPRS
Trigger: ACTTCGTGGCGTCCTGCACGGCACTTGGGGGTCCCAGAAGGCCCCGGCCTGAGGAGGCCGCCCACCTGCGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR TCA 72 bp GCCAGGGAACTCTTTACCTCTTGCCCCAGGCGCTCCTaGGCACCACCCCGAGATGGCCCGGGACACACCCAC +
Preference number: 3 (lower is better)
Translates to: ARELFTSCPRRS*APPRDGPGHTH
Trigger: GTGGGTGTGTCCCGGGCCATCTCGGGGTGGTGCTCAGGAGCGCCTGGGGCAAGAGGTAAAGAGTTCCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR CCA 72 bp CGGGACACACCCACCAAAGGCCACTGTTCTGGCCACTaGCACTGGGCCACGGCTGCCTCCAGAACAGAGCAG +
Preference number: 3 (lower is better)
Translates to: RDTPTKGHCSGH*HWATAASRTEQ
Trigger: CTGCTCTGTTCTGGAGGCAGCCGTGGCCCAGTGCCAGTGGCCAGAACAGTGGCCTTTGGTGGGTGTGTCCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR CCA 72 bp AAACAAGGATTCGAAGCGCAGGACAGACCCTTCCCCTaGATCCCAACGCCCTTTCGGCTCCTCCGCGGCCCC +
Preference number: 3 (lower is better)
Translates to: KQGFEAQDRPFP*IPTPFRLLRGP
Trigger: GGGGCCGCGGAGGAGCCGAAAGGGCGTTGGGATCCAGGGGAAGGGTCTGTCCTGCGCTTCGAATCCTTGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR CCA 72 bp AGCTCTAATTGTGGTGACCAGGCCCTCAGTCACAGCTaGGGCCACCAGAACAGAGGGGCCGCCCTCGCTCAG +
Preference number: 3 (lower is better)
Translates to: SSNCGDQALSHS*GHQNRGAALAQ
Trigger: CTGAGCGAGGGCGGCCCCTCTGTTCTGGTGGCCCCAGCTGTGACTGAGGGCCTGGTCACCACAATTAGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR-3UTR CAA 90 bp GACAGAGAAAGGAACGGCTCTGGGAAAGCCAAACCTGGCCAAAGTCCAACTTCCACGGTGACCCTGGCCTaGGCCACCCACCCTGGCCCT +
Preference number: 3 (lower is better)
Translates to: DRERNGSGKAKPGQSPTSTVTLA*ATHPGP
Trigger: AGGGCCAGGGTGGGTGGCCAAGGCCAGGGTCACCGT...GGAAGTTGGACTTTGGCCAGGTTTGGCTTTCCCAGAGCCGTTCCTTTCTCTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR TCA 72 bp AAGGCTGGCCCCTGTCTGGGTCTTCGCTGCTCTCCTTaGAGGCCAGGGAACTCTTTACCTCTTGCCCCAGGC +
Preference number: 3 (lower is better)
Translates to: KAGPCLGLRCSP*RPGNSLPLAPG
Trigger: GCCTGGGGCAAGAGGTAAAGAGTTCCCTGGCCTTCAAGGAGAGCAGCGAAGACCCAGACAGGGGCCAGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR CCA 72 bp TGCCAAAGCCCACAGGTAAAGCACCTTGCAGCCGTATaGGGAGCTCTGTCTCAGGCCACCTGGCATGCGGCA +
Preference number: 3 (lower is better)
Translates to: CQSPQVKHLAAV*GALSQATWHAA
Trigger: TGCCGCATGCCAGGTGGCCTGAGACAGAGCTCCCCATACGGCTGCAAGGTGCTTTACCTGTGGGCTTTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR CCA 72 bp AGGCATGGGAGCAGATCCTCCCATCCAACCCAAGGGTaGTATCCCCCTGAACCCCACCTGGTGATCACACCC +
Preference number: 3 (lower is better)
Translates to: RHGSRSSHPTQG*YPPEPHLVITP
Trigger: GGGTGTGATCACCAGGTGGGGTTCAGGGGGATACCACCCTTGGGTTGGATGGGAGGATCTGCTCCCATGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR-3UTR CAA 90 bp CTCTGTCTCAGGCCACCTGGCATGCGGCATGGGAGCAGCAGGAAATGCGGTCTGATGACCGTAAGGCTTTaGGGGCCAGCATCTTCCCAG +
Preference number: 3 (lower is better)
Translates to: LCLRPPGMRHGSSRKCGLMTVRL*GPASSQ
Trigger: CTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCAT...CAGACCGCATTTCCTGCTGCTCCCATGCCGCATGCCAGGTGGCCTGAGACAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR CCA 72 bp TCCCCAACCCCCAGGTTGTGGACCCATACTGGTCTGTaGATGGGTCTGTGGCCTGTTAGGAACTGGGCCACA +
Preference number: 3 (lower is better)
Translates to: SPTPRLWTHTGL*MGLWPVRNWAT
Trigger: TGTGGCCCAGTTCCTAACAGGCCACAGACCCATCCACAGACCAGTATGGGTCCACAACCTGGGGGTTGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR-3UTR CAA 90 bp GACAGAGAAAGGAACGGCTCTGGGAAAGCCAAACCTGGCCAAAGTCCAACTTCCCTCACCACGAGCCTCTaGTTCCACCGGCCTTGGGGA +
Preference number: 3 (lower is better)
Translates to: DRERNGSGKAKPGQSPTSLTTSL*FHRPWG
Trigger: TCCCCAAGGCCGGTGGAACAAGAGGCTCGTGGTGAG...GGAAGTTGGACTTTGGCCAGGTTTGGCTTTCCCAGAGCCGTTCCTTTCTCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR TCA 72 bp CCTGCAGACACAACCCCACCTGCCAGCATGCATAGCTaGCCAGTCCCTAATGCCACACCTCATGCTCATGGC +
Preference number: 3 (lower is better)
Translates to: PADTTPPASMHS*PVPNATPHAHG
Trigger: GCCATGAGCATGAGGTGTGGCATTAGGGACTGGTCAGCTATGCATGCTGGCAGGTGGGGTTGTGTCTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR TCA 72 bp AACCGGCAGGGCAAGTGGCAGAAGCCAGCTCTCGGGTaGGAGTCCTTACTCCCTGTTGCATTCGTTCCCCAA +
Preference number: 3 (lower is better)
Translates to: NRQGKWQKPALG*ESLLPVAFVPQ
Trigger: TTGGGGAACGAATGCAACAGGGAGTAAGGACTCTCACCCGAGAGCTGGCTTCTGCCACTTGCCCTGCCGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR TCA 72 bp CCCAGGTGCTCTCCCACGAGGAGACAGTCTTTCATTTaGGGTTCTGAAGCGGCCTCACCTCGAACCCATGCG +
Preference number: 3 (lower is better)
Translates to: PRCSPTRRQSFI*GSEAASPRTHA
Trigger: CGCATGGGTTCGAGGTGAGGCCGCTTCAGAACCTCAAATGAAAGACTGTCTCCTCGTGGGAGAGCACCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR GCA 72 bp TGCGGTCTGGCCACGTTTCTGAACAACGCACAGCCTTaGTTAGAAGACGCCAAGGACACCGACCAAGGGCCA +
Preference number: 3 (lower is better)
Translates to: CGLATFLNNAQP*LEDAKDTDQGP
Trigger: TGGCCCTTGGTCGGTGTCCTTGGCGTCTTCTAAGCAAGGCTGTGCGTTGTTCAGAAACGTGGCCAGACCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR GCA 72 bp CATGGGCCGCAGAGCACTGCTTCCCGGAGCTTCACCTaGACCTACGTCCCTGAAGGGAAAATCAGCGTAAGA +
Preference number: 3 (lower is better)
Translates to: HGPQSTASRSFT*TYVPEGKISVR
Trigger: TCTTACGCTGATTTTCCCTTCAGGGACGTAGGTGCAGGTGAAGCTCCGGGAAGCAGTGCTCTGCGGCCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR-3UTR CAA 90 bp GCACCTTCTCCACCTTCTGATCCTCTCTTGGGTTACTGCCAAAGCCCACAGGTATGGGGACGAAGGAGTTaGACTGCCTACTCGCTGGCC +
Preference number: 3 (lower is better)
Translates to: APSPPSDPLLGYCQSPQVWGRRS*TAYSLA
Trigger: GGCCAGCGAGTAGGCAGTCAAACTCCTTCGTCCCCA...TACCTGTGGGCTTTGGCAGTAACCCAAGAGAGGATCAGAAGGTGGAGAAGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR TCA 72 bp CCTCAGCATCCCCCACCTCTCAATTCCGGTCTCCAGTaGAGGCTGTACTTGGTGCATCTCAGCCTAGCTGTC +
Preference number: 3 (lower is better)
Translates to: PQHPPPLNSGLQ*RLYLVHLSLAV
Trigger: GACAGCTAGGCTGAGATGCACCAAGTACAGCCTTCACTGGAGACCGGAATTGAGAGGTGGGGGATGCTGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR TCA 72 bp AAATCACCTGGGTACTCCCAAAGAGAAAACCTGTGCTaGGAACGAGCTGGGCTGGGGGCACTCCCTGTGGCA +
Preference number: 3 (lower is better)
Translates to: KSPGYSQRENLC*ERAGLGALPVA
Trigger: TGCCACAGGGAGTGCCCCCAGCCCAGCTCGTTCTCAGCACAGGTTTTCTCTTTGGGAGTACCCAGGTGATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR TCA 72 bp CATGGGGTCCTGGGATTAGGGAGTTGGACTGAAAGGTaGGGTCACTCCACACCTAGGCATGGGAGCAGATCC +
Preference number: 3 (lower is better)
Translates to: HGVLGLGSWTER*GHSTPRHGSRS
Trigger: GGATCTGCTCCCATGCCTAGGTGTGGAGTGACCTCACCTTTCAGTCCAACTCCCTAATCCCAGGACCCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR TCA 72 bp GGCATGTTGCTCCTTGCCTCAGGTTCCTCCAACGGCTaGGGAAAAGCCAATGTCCTCACACCAGCCACTAGG +
Preference number: 3 (lower is better)
Translates to: GMLLLASGSSNG*GKANVLTPATR
Trigger: CCTAGTGGCTGGTGTGAGGACATTGGCTTTTCCTCAGCCGTTGGAGGAACCTGAGGCAAGGAGCAACATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR GCA 72 bp GGAAACGCTAAGCTCCTGCTAAACGGGATAAGCTCCTaGACCCTAGACCTGCTGCCTCCTTCGCTCTTCTCC +
Preference number: 3 (lower is better)
Translates to: GNAKLLLNGISS*TLDLLPPSLFS
Trigger: GGAGAAGAGCGAAGGAGGCAGCAGGTCTAGGGTGCAGGAGCTTATCCCGTTTAGCAGGAGCTTAGCGTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR CCA 72 bp GGGGCACTCCCTGTGGCAGGCCTGTTAAATCACTCGTaGCACCTTCTCCACCTTCTGATCCTCTCTTGGGTT +
Preference number: 3 (lower is better)
Translates to: GALPVAGLLNHS*HLLHLLILSWV
Trigger: AACCCAAGAGAGGATCAGAAGGTGGAGAAGGTGCCACGAGTGATTTAACAGGCCTGCCACAGGGAGTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR CCA 72 bp GTACTCCCAAAGAGAAAACCTGTGCTGAGAACGAGCTaGGCTGGGGGCACTCCCTGTGGCAGGCCTGTTAAA +
Preference number: 3 (lower is better)
Translates to: VLPKRKPVLRTS*AGGTPCGRPVK
Trigger: TTTAACAGGCCTGCCACAGGGAGTGCCCCCAGCCCAGCTCGTTCTCAGCACAGGTTTTCTCTTTGGGAGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR CCA 72 bp ACACCCAAGAAAGTCTCAAACCTGACAGGTGGGATGTaGGGCCTGAACAGCCTGGAGCGGCCATTTCCACGT +
Preference number: 3 (lower is better)
Translates to: TPKKVSNLTGGM*GLNSLERPFPR
Trigger: ACGTGGAAATGGCCGCTCCAGGCTGTTCAGGCCCCACATCCCACCTGTCAGGTTTGAGACTTTCTTGGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR CCA 72 bp AGAGGACACACCCAAGAAAGTCTCAAACCTGACAGGTaGGATGTGGGGCCTGAACAGCCTGGAGCGGCCATT +
Preference number: 3 (lower is better)
Translates to: RGHTQESLKPDR*DVGPEQPGAAI
Trigger: AATGGCCGCTCCAGGCTGTTCAGGCCCCACATCCCACCTGTCAGGTTTGAGACTTTCTTGGGTGTGTCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR-3UTR CAA 90 bp GACAGAGAAAGGAACGGCTCTGGGAAAGCCAAACCTGGCCAAAGTCCAACTTCCCTTGTTCCACCGGCCTaGGGGACGAAGGAGTTTGAC +
Preference number: 3 (lower is better)
Translates to: DRERNGSGKAKPGQSPTSLVPPA*GTKEFD
Trigger: GTCAAACTCCTTCGTCCCCAAGGCCGGTGGAACAAG...GGAAGTTGGACTTTGGCCAGGTTTGGCTTTCCCAGAGCCGTTCCTTTCTCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CAA 90 bp TGTCCAACCTGGGAGGGTGGAATTTCGGCTCACCTGGAGAGGATGCCTGATGACGCTTTGGCCAAAGTGTaGGTTAAGGCTGCTCCAGTG +
Preference number: 3 (lower is better)
Translates to: CPTWEGGISAHLERMPDDALAKV*VKAAPV
Trigger: CACTGGAGCAGCCTTAACCAACACTTTGGCCAAAGC...GTCATCAGGCATCCTCTCCAGGTGAGCCGAAATTCCACCCTCCCAGGTTGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CAA 90 bp TTAAGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCAGCAACAGCCTGCAGTTaGCCAAGTCCAGCTGAAGCC +
Preference number: 3 (lower is better)
Translates to: LRLLQWEAHCSHVLCGFPATACS*PSPAEA
Trigger: GGCTTCAGCTGGACTTGGCAAACTGCAGGCTGTTGC...TGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR-3UTR CAA 90 bp CCTCCCGCCACATCAACTCTGTGCTCCTCCTCTACCGTGCCAGGGACACTCCCAAAGGGTTTGCCTGTTTaGTTCACTTGCTGTATCCTC +
Preference number: 3 (lower is better)
Translates to: PPATSTLCSSSTVPGTLPKGLPV*FTCCIL
Trigger: GAGGATACAGCAAGTGAACAAAACAGGCAAACCCTT...TGGGAGTGTCCCTGGCACGGTAGAGGAGGAGCACAGAGTTGATGTGGCGGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR TCA 72 bp GGGCTCCTAAAGGCGACTAAGAGGAAAGACCAGAGGTaGCCGGACCAGATCCCTGTGATTCTGGGACAGAAG +
Preference number: 3 (lower is better)
Translates to: GLLKATKRKDQR*PDQIPVILGQK
Trigger: CTTCTGTCCCAGAATCACAGGGATCTGGTCCGGTCACCTCTGGTCTTTCCTCTTAGTCGCCTTTAGGAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR TCA 72 bp CTCTCCCACGAGGAGACAGTCTTTCATTTGAGGTTCTaGAGCGGCCTCACCTCGAACCCATGCGGGATCTTC +
Preference number: 3 (lower is better)
Translates to: LSHEETVFHLRF*SGLTSNPCGIF
Trigger: GAAGATCCCGCATGGGTTCGAGGTGAGGCCGCTTCAGAACCTCAAATGAAAGACTGTCTCCTCGTGGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR GCA 72 bp AGCTCAAGGCACTTGGTTTGGGAAGCCTGGTCTCCCTaGAAAGCCGGGAGGCATCAAGCTCTAATTGTGGTG +
Preference number: 3 (lower is better)
Translates to: SSRHLVWEAWSP*KAGRHQALIVV
Trigger: CACCACAATTAGAGCTTGATGCCTCCCGGCTTTGCAGGGAGACCAGGCTTCCCAAACCAAGTGCCTTGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR GCA 72 bp CTTATGTATCCAAGAATCCAGCCCCGTCATCTCGCCTaGTACCCTCACTCAGGAGGAGGCCTTGAAGTGAGC +
Preference number: 3 (lower is better)
Translates to: LMYPRIQPRHLA*YPHSGGGLEVS
Trigger: GCTCACTTCAAGGCCTCCTCCTGAGTGAGGGTAGCAGGCGAGATGACGGGGCTGGATTCTTGGATACATAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR CCA 72 bp CCCAGTTCCCAGAGGATCACAAGGCCAAGGATCCAATaGGCACACCATGAGGACCCAAGGAAAGGACAGAGA +
Preference number: 3 (lower is better)
Translates to: PSSQRITRPRIQ*AHHEDPRKGQR
Trigger: TCTCTGTCCTTTCCTTGGGTCCTCATGGTGTGCCCATTGGATCCTTGGCCTTGTGATCCTCTGGGAACTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR CCA 72 bp CTTCTCTTCCAGCACAGAAGGCTGCAAAAGTGGAACTaGCCCCCAGTTCCCAGAGGATCACAAGGCCAAGGA +
Preference number: 3 (lower is better)
Translates to: LLFQHRRLQKWN*PPVPRGSQGQG
Trigger: TCCTTGGCCTTGTGATCCTCTGGGAACTGGGGGCCAGTTCCACTTTTGCAGCCTTCTGTGCTGGAAGAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CAA 90 bp CCTCCCGCCACATCAACTCTGTGCTCCTCCTCTACCGTGCCAGGGACACTCCCAGGAGAGGACACAGTTTaGTTGCATACAGATGACATT +
Preference number: 3 (lower is better)
Translates to: PPATSTLCSSSTVPGTLPGEDTV*LHTDDI
Trigger: AATGTCATCTGTATGCAACAAAACTGTGTCCTCTCC...TGGGAGTGTCCCTGGCACGGTAGAGGAGGAGCACAGAGTTGATGTGGCGGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR TCA 72 bp GAGGATCACAAGGCCAAGGATCCAATGGGCACACCATaGGGACCCAAGGAAAGGACAGAGAAAGGAACGGCT +
Preference number: 3 (lower is better)
Translates to: EDHKAKDPMGTP*GPKERTEKGTA
Trigger: AGCCGTTCCTTTCTCTGTCCTTTCCTTGGGTCCTCATGGTGTGCCCATTGGATCCTTGGCCTTGTGATCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR GCA 72 bp GCACCTTCTCCACCTTCTGATCCTCTCTTGGGTTACTaGCAAAGCCCACAGGTAAAGCACCTTGCAGCCGTA +
Preference number: 3 (lower is better)
Translates to: APSPPSDPLLGY*QSPQVKHLAAV
Trigger: TACGGCTGCAAGGTGCTTTACCTGTGGGCTTTGGCAGTAACCCAAGAGAGGATCAGAAGGTGGAGAAGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR GCA 72 bp GGGATCTTCCAAGAGTGCAATTCCCACAGCTCCACTTaGTCAAGGAAGTCTCGGTGCACAGAAGGAAGCCTG +
Preference number: 3 (lower is better)
Translates to: GIFQECNSHSST*SRKSRCTEGSL
Trigger: CAGGCTTCCTTCTGTGCACCGAGACTTCCTTGAGCAAGTGGAGCTGTGGGAATTGCACTCTTGGAAGATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR CCA 72 bp GGGCTTTGGCCAAAGTGTTGGTTAAGGCTGCTCCAGTaGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTT +
Preference number: 3 (lower is better)
Translates to: GLWPKCWLRLLQ*EAHCSHVLCGF
Trigger: AAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCTTAACCAACACTTTGGCCAAAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CAA 90 bp CTACAGACCAAACAGCTAAGCCGCAACACGATATGTGATGGTGCAGAGCTGTTCGGCAGCTCAAGGCACTaGGTTTGGGAAGCCTGGTCT +
Preference number: 3 (lower is better)
Translates to: LQTKQLSRNTICDGAELFGSSRH*VWEAWS
Trigger: AGACCAGGCTTCCCAAACCAAGTGCCTTGAGCTGCC...GAACAGCTCTGCACCATCACATATCGTGTTGCGGCTTAGCTGTTTGGTCTGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CAA 90 bp AGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCAACGCCCTTTCTTCTAGAGTaGGTGGGAAGAAACTCTGCT +
Preference number: 3 (lower is better)
Translates to: RLLQWEAHCSHVLCGFPTPFLLE*VGRNSA
Trigger: AGCAGAGTTTCTTCCCACCAACTCTAGAAGAAAGGG...CGTTGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CAA 90 bp CCTCCCGCCACATCAACTCTGTGCTCCTCCTCTACCGTGCCAGGGACACTCCCAGAGGACACAGTTTTGTaGCATACAGATGACATTACT +
Preference number: 3 (lower is better)
Translates to: PPATSTLCSSSTVPGTLPEDTVL*HTDDIT
Trigger: AGTAATGTCATCTGTATGCAACAAAACTGTGTCCTC...TGGGAGTGTCCCTGGCACGGTAGAGGAGGAGCACAGAGTTGATGTGGCGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR TCA 72 bp CTGCTGCCTCCTTCGCTCTTCTCCAGGCCTCACTCCTaGCTGAACTCAATTCATTCACCAGGGTTTACCTCT +
Preference number: 3 (lower is better)
Translates to: LLPPSLFSRPHS*LNSIHSPGFTS
Trigger: AGAGGTAAACCCTGGTGAATGAATTGAGTTCAGTCAGGAGTGAGGCCTGGAGAAGAGCGAAGGAGGCAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR CCA 72 bp TCACCAGGCCTGAGCTGCAATGATCCCCCAACTGGCTaGAGAAAGTACATGGACAACATCTCCTTACACGGT +
Preference number: 3 (lower is better)
Translates to: SPGLSCNDPPTG*RKYMDNISLHG
Trigger: ACCGTGTAAGGAGATGTTGTCCATGTACTTTCTCCAGCCAGTTGGGGGATCATTGCAGCTCAGGCCTGGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR CCA 72 bp CCTGATGATCTGTCACTGTTTCCCATCACGCCCAGATaGGACTGTCTAGTTGCAGGAAAAGAAGCTCAGGGC +
Preference number: 3 (lower is better)
Translates to: PDDLSLFPITPR*DCLVAGKEAQG
Trigger: GCCCTGAGCTTCTTTTCCTGCAACTAGACAGTCCCATCTGGGCGTGATGGGAAACAGTGACAGATCATCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR-3UTR CAA 90 bp GCACCTTCTCCACCTTCTGATCCTCTCTTGGGTTACTGCCAAAGCCCACAGGTAAACAGCCTTCCAGGATaGGAGAAGTCCCATAACCTG +
Preference number: 3 (lower is better)
Translates to: APSPPSDPLLGYCQSPQVNSLPG*EKSHNL
Trigger: CAGGTTATGGGACTTCTCCAATCCTGGAAGGCTGTT...TACCTGTGGGCTTTGGCAGTAACCCAAGAGAGGATCAGAAGGTGGAGAAGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CAA 90 bp TCTAGAGTTGGTGGGAAGAAACTCTGCTGGATCTACTCACCTGCAGATCTTCCACAGAGTGATGTCTCCTaGGAAGGGCCTCTGACCACC +
Preference number: 3 (lower is better)
Translates to: SRVGGKKLCWIYSPADLPQSDVS*EGPLTT
Trigger: GGTGGTCAGAGGCCCTTCCAAGGAGACATCACTCTG...TGGAAGATCTGCAGGTGAGTAGATCCAGCAGAGTTTCTTCCCACCAACTCTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CAA 90 bp GCCGCAACACGATATGTGATGGTGCAGAGCTGTTCTGGCCTGAAAAGAACTTTCTCTTCGCTGCTCTCCTaGAAGGCCAGGGAACTCTTT +
Preference number: 3 (lower is better)
Translates to: AATRYVMVQSCSGLKRTFSSLLS*KARELF
Trigger: AAAGAGTTCCCTGGCCTTCAAGGAGAGCAGCGAAGA...GAAAGTTCTTTTCAGGCCAGAACAGCTCTGCACCATCACATATCGTGTTGCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CAA 90 bp AGTACTTCTAAAAAGCTCAACAGCCTTCCAGGATTGGAGAAGTCCCATAACCTGTGGGGACGAAGGAGTTaGACTGCCTACTCGCTGGCC +
Preference number: 3 (lower is better)
Translates to: STSKKLNSLPGLEKSHNLWGRRS*TAYSLA
Trigger: GGCCAGCGAGTAGGCAGTCAAACTCCTTCGTCCCCA...CAGGTTATGGGACTTCTCCAATCCTGGAAGGCTGTTGAGCTTTTTAGAAGTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR TCA 72 bp AGTGACCTGGGCTACTCTGGGCACATCTGTGATCAATaGGAAATCTCACACTGCAGGACGACACCCTCTGAA +
Preference number: 3 (lower is better)
Translates to: SDLGYSGHICDQ*EISHCRTTPSE
Trigger: TTCAGAGGGTGTCGTCCTGCAGTGTGAGATTTCTCATTGATCACAGATGTGCCCAGAGTAGCCCAGGTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR TCA 72 bp AGAGGAAAGACCAGAGGTGACCGGACCAGATCCCTGTaGTTCTGGGACAGAAGAGATGTAAACCGCAAACAC +
Preference number: 3 (lower is better)
Translates to: RGKTRGDRTRSL*FWDRRDVNRKH
Trigger: GTGTTTGCGGTTTACATCTCTTCTGTCCCAGAATCACAGGGATCTGGTCCGGTCACCTCTGGTCTTTCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR GCA 72 bp AAGTGTTGGTTAAGGCTGCTCCAGTGGGAGGCTCACTaGAGTCACGTTCTTTGTGGCTTTCCAACGTCTACA +
Preference number: 3 (lower is better)
Translates to: KCWLRLLQWEAH*SHVLCGFPTST
Trigger: TGTAGACGTTGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCTTAACCAACACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR GCA 72 bp CATGGCCACTGGGTCTCCTCCCCAGCATTTACAAACTaGTTACCTTATTTCTCATGGCTCGGAGGAGATCTC +
Preference number: 3 (lower is better)
Translates to: HGHWVSSPAFTN*LPYFSWLGGDL
Trigger: GAGATCTCCTCCGAGCCATGAGAAATAAGGTAAGCAGTTTGTAAATGCTGGGGAGGAGACCCAGTGGCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR CCA 72 bp GGACAGAGAAAGGAACGGCTCTGGGAAAGCCAAACCTaGCCAAAGTCCAACTTCCTGAAAAGAAAGCAGCCA +
Preference number: 3 (lower is better)
Translates to: GQRKERLWESQT*PKSNFLKRKQP
Trigger: TGGCTGCTTTCTTTTCAGGAAGTTGGACTTTGGCCAGGTTTGGCTTTCCCAGAGCCGTTCCTTTCTCTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR CCA 72 bp GCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTaGCTTTCCAACGTCTACAGAAAGAATTTAAGCGCC +
Preference number: 3 (lower is better)
Translates to: APVGGSLQSRSL*LSNVYRKNLSA
Trigger: GGCGCTTAAATTCTTTCTGTAGACGTTGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR CCA 72 bp GTGGGCTCACAGCACATTACTAGTCCCTCTCATGAGTaGTTACAGGACTCGGCTGTGTTGAAGTCCTGTGTT +
Preference number: 3 (lower is better)
Translates to: VGSQHITSPSHE*LQDSAVLKSCV
Trigger: AACACAGGACTTCAACACAGCCGAGTCCTGTAACCACTCATGAGAGGGACTAGTAATGTGCTGTGAGCCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR-3UTR CAA 90 bp AGTACTTCTAAAAAGCTCAACAGCCTTCCAGGATTGGAGAAGTCCCATAACCTGGGCAGCTCAAGGCACTaGGTTTGGGAAGCCTGGTCT +
Preference number: 3 (lower is better)
Translates to: STSKKLNSLPGLEKSHNLGSSRH*VWEAWS
Trigger: AGACCAGGCTTCCCAAACCAAGTGCCTTGAGCTGCC...CAGGTTATGGGACTTCTCCAATCCTGGAAGGCTGTTGAGCTTTTTAGAAGTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CAA 90 bp TCTAGAGTTGGTGGGAAGAAACTCTGCTGGATCTACTCACCTGCAGATCTTCCAGAACAACGCACAGCCTaGCTTAGAAGACGCCAAGGA +
Preference number: 3 (lower is better)
Translates to: SRVGGKKLCWIYSPADLPEQRTA*LRRRQG
Trigger: TCCTTGGCGTCTTCTAAGCAAGGCTGTGCGTTGTTC...TGGAAGATCTGCAGGTGAGTAGATCCAGCAGAGTTTCTTCCCACCAACTCTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR TCA 72 bp AAAACACTCTACAGTCTTCCTGTGGCCACACACTCCTaGGAGAGCTGGTCTTTGGGCTGCTTAAAGTTCCTG +
Preference number: 3 (lower is better)
Translates to: KTLYSLPVATHS*ESWSLGCLKFL
Trigger: CAGGAACTTTAAGCAGCCCAAAGACCAGCTCTCTCAGGAGTGTGTGGCCACAGGAAGACTGTAGAGTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR TCA 72 bp AGAGCACAGCTCCCCAGGGAATGCTTGAGAAATCGATaGAGGTATTTTCTGGTGGTCACAGAGACTAGCGGA +
Preference number: 3 (lower is better)
Translates to: RAQLPRECLRNR*RYFLVVTETSG
Trigger: TCCGCTAGTCTCTGTGACCACCAGAAAATACCTTCATCGATTTCTCAAGCATTCCCTGGGGAGCTGTGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR GCA 72 bp ACTGTTTCCCATCACGCCCAGATGGGACTGTCTAGTTaGAGGAAAAGAAGCTCAGGGCTCCTACTGATTCTA +
Preference number: 3 (lower is better)
Translates to: TVSHHAQMGLSS*RKRSSGLLLIL
Trigger: TAGAATCAGTAGGAGCCCTGAGCTTCTTTTCCTGCAACTAGACAGTCCCATCTGGGCGTGATGGGAAACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR GCA 72 bp AATATTCAGTCCAGAACAACAGGGCATGTTGCTCCTTaGCTCAGGTTCCTCCAACGGCTGAGGAAAAGCCAA +
Preference number: 3 (lower is better)
Translates to: NIQSRTTGHVAP*LRFLQRLRKSQ
Trigger: TTGGCTTTTCCTCAGCCGTTGGAGGAACCTGAGGCAAGGAGCAACATGCCCTGTTGTTCTGGACTGAATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR CCA 72 bp GAATTTAAAAAGTCTGAAGCAAGTTTATCCAGTAGATaGCTGGGGGTGCTACTCGCGCTGTCTCTGAGGCCC +
Preference number: 3 (lower is better)
Translates to: EFKKSEASLSSR*LGVLLALSLRP
Trigger: GGGCCTCAGAGACAGCGCGAGTAGCACCCCCAGCCATCTACTGGATAAACTTGCTTCAGACTTTTTAAATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR CCA 72 bp AGCCGCAACACGATATGTGATGGTGCAGAGCTGTTCTaGCCTGAAAAGAACTTTCCACTTGCTGAGCACAGT +
Preference number: 3 (lower is better)
Translates to: SRNTICDGAELF*PEKNFPLAEHS
Trigger: ACTGTGCTCAGCAAGTGGAAAGTTCTTTTCAGGCCAGAACAGCTCTGCACCATCACATATCGTGTTGCGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CAA 90 bp AACACCCTTTCATCATGCAAGGAAGAGACAGAATGTGAGTGTTGGTTTTTGGTAGGAACTCTTTACCTCTaGCCCCAGGCGCTCCTGAGC +
Preference number: 3 (lower is better)
Translates to: NTLSSCKEETECECWFLVGTLYL*PQALLS
Trigger: GCTCAGGAGCGCCTGGGGCAAGAGGTAAAGAGTTCC...TACCAAAAACCAACACTCACATTCTGTCTCTTCCTTGCATGATGAAAGGGTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR-3UTR CAA 90 bp GCCGCAACACGATATGTGATGGTGCAGAGCTGTTCTGGCCTGAAAAGAACTTTCCCCTTTCTTCTAGAGTaGGTGGGAAGAAACTCTGCT +
Preference number: 3 (lower is better)
Translates to: AATRYVMVQSCSGLKRTFPFLLE*VGRNSA
Trigger: AGCAGAGTTTCTTCCCACCAACTCTAGAAGAAAGGG...GAAAGTTCTTTTCAGGCCAGAACAGCTCTGCACCATCACATATCGTGTTGCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR TCA 72 bp TCAACAGCCTTCCAGGATTGGAGAAGTCCCATAACCTaGACTACAGACCAAACAGCTAAGCCGCAACACGAT +
Preference number: 3 (lower is better)
Translates to: STAFQDWRSPIT*TTDQTAKPQHD
Trigger: ATCGTGTTGCGGCTTAGCTGTTTGGTCTGTAGTTCAGGTTATGGGACTTCTCCAATCCTGGAAGGCTGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR GCA 72 bp ACTACCAAGAACAGTTCACCGTCCTGGAAATCCAGTTaGCGTGGCTATGGTGGTAAACTATCCTGCACTTGT +
Preference number: 3 (lower is better)
Translates to: TTKNSSPSWKSS*RGYGGKLSCTC
Trigger: ACAAGTGCAGGATAGTTTACCACCATAGCCACGGCAACTGGATTTCCAGGACGGTGAACTGTTCTTGGTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR CCA 72 bp TTGGAACCTGTAATAAAACACTCTACAGTCTTCCTGTaGCCACACACTCCTGAGAGAGCTGGTCTTTGGGCT +
Preference number: 3 (lower is better)
Translates to: LEPVIKHSTVFL*PHTPERAGLWA
Trigger: AGCCCAAAGACCAGCTCTCTCAGGAGTGTGTGGCCACAGGAAGACTGTAGAGTGTTTTATTACAGGTTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR-3UTR CAA 90 bp TTAAGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCAGCAGCAAGAAAAGAATaGCCAAAGATAACTGAATCG +
Preference number: 3 (lower is better)
Translates to: LRLLQWEAHCSHVLCGFPAARKE*PKITES
Trigger: CGATTCAGTTATCTTTGGCAATTCTTTTCTTGCTGC...TGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CAA 90 bp TGTGAACAGATGCCAGGCAGTAGTTACCAATCCAAGGTGAGGTGCTCAAGTTCAAGTCCTTACTCCCTGTaGCATTCGTTCCCCAAAGTT +
Preference number: 3 (lower is better)
Translates to: CEQMPGSSYQSKVRCSSSSPYSL*HSFPKV
Trigger: AACTTTGGGGAACGAATGCAACAGGGAGTAAGGACT...TGAACTTGAGCACCTCACCTTGGATTGGTAACTACTGCCTGGCATCTGTTCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR-3UTR CAA 90 bp CCCTCCAAATGGATGTGGGCTCACAGCACATTACTAGTCCCTCTCATGAGTGGTAGCTATAAACGTCCTTaGAGCAGAATGCCTTTTCCT +
Preference number: 3 (lower is better)
Translates to: PSKWMWAHSTLLVPLMSGSYKRP*SRMPFP
Trigger: AGGAAAAGGCATTCTGCTCAAAGGACGTTTATAGCT...ACCACTCATGAGAGGGACTAGTAATGTGCTGTGAGCCCACATCCATTTGGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR-3UTR CAA 90 bp CGGCACCCTATATCCTGCCTAGCTCAATACACTAAGTGCTCAAATAAAATACATAGGCATCGGAAACAGTaGTCTCTAGGCAAGTGGGGC +
Preference number: 3 (lower is better)
Translates to: RHPISCLAQYTKCSNKIHRHRKQ*SLGKWG
Trigger: GCCCCACTTGCCTAGAGACAACTGTTTCCGATGCCT...ATGTATTTTATTTGAGCACTTAGTGTATTGAGCTAGGCAGGATATAGGGTGCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CAA 90 bp AAGACTCAAGAAGCAACAAGAGAAATTCTGGCACACGTGCCCAAGAGAGGTTTACCTTCCCCACACACTTaGGTTTCTTTGTGGCAGCAA +
Preference number: 3 (lower is better)
Translates to: KTQEATREILAHVPKRGLPSPHT*VSLWQQ
Trigger: TTGCTGCCACAAAGAAACCAAAGTGTGTGGGGAAGG...TAAACCTCTCTTGGGCACGTGTGCCAGAATTTCTCTTGTTGCTTCTTGAGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CAA 90 bp TCTAGAGTTGGTGGGAAGAAACTCTGCTGGATCTACTCACCTGCAGATCTTCCAAAAAGAACTTTCCACTaGCTGAGCACAGTGGGAAAC +
Preference number: 3 (lower is better)
Translates to: SRVGGKKLCWIYSPADLPKRTFH*LSTVGN
Trigger: GTTTCCCACTGTGCTCAGCAAGTGGAAAGTTCTTTT...TGGAAGATCTGCAGGTGAGTAGATCCAGCAGAGTTTCTTCCCACCAACTCTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CAA 90 bp GCCGCAACACGATATGTGATGGTGCAGAGCTGTTCTGGCCTGAAAAGAACTTTCTTGGTGCCTAATGACTaGTGGAGCACTTCAAAAACT +
Preference number: 3 (lower is better)
Translates to: AATRYVMVQSCSGLKRTFLVPND*WSTSKT
Trigger: AGTTTTTGAAGTGCTCCACAAGTCATTAGGCACCAA...GAAAGTTCTTTTCAGGCCAGAACAGCTCTGCACCATCACATATCGTGTTGCGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR TCA 72 bp GCAGTTTGCCAAGTCCAGCTGAAGCCGCCTAGCTCCTaGGAGATGAGAATGCCAGTACAGATAAAAGATTTA +
Preference number: 3 (lower is better)
Translates to: AVCQVQLKPPSS*EMRMPVQIKDL
Trigger: TAAATCTTTTATCTGTACTGGCATTCTCATCTCTCAGGAGCTAGGCGGCTTCAGCTGGACTTGGCAAACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR TCA 72 bp GTCCCTCTCATGAGTGGTTACAGGACTCGGCTGTGTTaGAGTCCTGTGTTCTCATATTTTCACCATGGGTTT +
Preference number: 3 (lower is better)
Translates to: VPLMSGYRTRLC*SPVFSYFHHGF
Trigger: AAACCCATGGTGAAAATATGAGAACACAGGACTTCAACACAGCCGAGTCCTGTAACCACTCATGAGAGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR GCA 72 bp AGTAATGAGTCACAGAGTAGTGACGAAAGAGAACGATaGTGTTCAGACCCGAACCTCGGGCCAAATGAGATT +
Preference number: 3 (lower is better)
Translates to: SNESQSSDERER*CSDPNLGPNEI
Trigger: AATCTCATTTGGCCCGAGGTTCGGGTCTGAACAGCATCGTTCTCTTTCGTCACTACTCTGTGACTCATTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR CCA 72 bp GCCCTTTCTTCTAGAGTTGGTGGGAAGAAACTCTGCTaGATCTACTCACCTGCAGATCTTCCAGAACATCTA +
Preference number: 3 (lower is better)
Translates to: ALSSRVGGKKLC*IYSPADLPEHL
Trigger: TAGATGTTCTGGAAGATCTGCAGGTGAGTAGATCCAGCAGAGTTTCTTCCCACCAACTCTAGAAGAAAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CAA 90 bp CACAGCTTTAGGGACACTGAAAAGGAATACTGTATCCACCAAACACACACACAGGTGGGGTCCCCGCATTaGAGGTATGTTTATACATGT +
Preference number: 3 (lower is better)
Translates to: HSFRDTEKEYCIHQTHTQVGSPH*RYVYTC
Trigger: ACATGTATAAACATACCTCAAATGCGGGGACCCCAC...CTGTGTGTGTGTTTGGTGGATACAGTATTCCTTTTCAGTGTCCCTAAAGCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR TCA 72 bp CGCAAGCAAAATGTACGATTCCCTCCTCTCCCTTCCTaGAAGGCCTGTAGACTGACATTAAGCAGGAATTTA +
Preference number: 3 (lower is better)
Translates to: RKQNVRFPPLPS*KACRLTLSRNL
Trigger: TAAATTCCTGCTTAATGTCAGTCTACAGGCCTTTCAGGAAGGGAGAGGAGGGAATCGTACATTTTGCTTGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR TCA 72 bp GTGAACAGATGCCAGGCAGTAGTTACCAATCCAAGGTaGGGTGCTCAAGTTCAAAACCTGACCTTAGTTGTA +
Preference number: 3 (lower is better)
Translates to: VNRCQAVVTNPR*GAQVQNLTLVV
Trigger: TACAACTAAGGTCAGGTTTTGAACTTGAGCACCTCACCTTGGATTGGTAACTACTGCCTGGCATCTGTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR GCA 72 bp TCTCTCTCATCACAAGTTTTAGGAAAGCAGAAGTTTTaGCTGTCTTGTTCATCGCTGTATCTCCGGCACCCT +
Preference number: 3 (lower is better)
Translates to: SLSSQVLGKQKF*LSCSSLYLRHP
Trigger: AGGGTGCCGGAGATACAGCGATGAACAAGACAGGCAAAACTTCTGCTTTCCTAAAACTTGTGATGAGAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR CCA 72 bp TCAGGCACACACATGTCAGTGCTCTACTGGGACACCTaGTACATGATATCCCTATTAAAGAGTACACAGTAC +
Preference number: 3 (lower is better)
Translates to: SGTHMSVLYWDT*YMISLLKSTQY
Trigger: GTACTGTGTACTCTTTAATAGGGATATCATGTACCAGGTGTCCCAGTAGAGCACTGACATGTGTGTGCCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR CCA 72 bp CAAGGATTCTTTCACCTGAAAAACGGAGTCCAAATCTaGGGCAGGCAAATAATGAAACCCTCAGACCTATGC +
Preference number: 3 (lower is better)
Translates to: QGFFHLKNGVQI*GRQIMKPSDLC
Trigger: GCATAGGTCTGAGGGTTTCATTATTTGCCTGCCCCAGATTTGGACTCCGTTTTTCAGGTGAAAGAATCCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR-3UTR CAA 90 bp AGTACTTCTAAAAAGCTCAACAGCCTTCCAGGATTGGAGAAGTCCCATAACCTGAGGAAAGCAGAAGTTTaGCCTGTCTTGTTCATCGCT +
Preference number: 3 (lower is better)
Translates to: STSKKLNSLPGLEKSHNLRKAEV*PVLFIA
Trigger: AGCGATGAACAAGACAGGCAAAACTTCTGCTTTCCT...CAGGTTATGGGACTTCTCCAATCCTGGAAGGCTGTTGAGCTTTTTAGAAGTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CAA 90 bp AGTACTTCTAAAAAGCTCAACAGCCTTCCAGGATTGGAGAAGTCCCATAACCTGAAAAGAACTTTCCACTaGCTGAGCACAGTGGGAAAC +
Preference number: 3 (lower is better)
Translates to: STSKKLNSLPGLEKSHNLKRTFH*LSTVGN
Trigger: GTTTCCCACTGTGCTCAGCAAGTGGAAAGTTCTTTT...CAGGTTATGGGACTTCTCCAATCCTGGAAGGCTGTTGAGCTTTTTAGAAGTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR-3UTR CAA 90 bp CACAGCTTTAGGGACACTGAAAAGGAATACTGTATCCACCAAACACACACACAGGAGGGGAGTAGACCATaGGGTTTAAAAGATGATGTC +
Preference number: 3 (lower is better)
Translates to: HSFRDTEKEYCIHQTHTQEGSRP*GLKDDV
Trigger: GACATCATCTTTTAAACCCAATGGTCTACTCCCCTC...CTGTGTGTGTGTTTGGTGGATACAGTATTCCTTTTCAGTGTCCCTAAAGCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR TCA 72 bp AACTGGATACACCAGATGATGCCCAAGGTGTTTTCATaGCAAGTACCCACACGAGATCTCTTCAAACAAACC +
Preference number: 3 (lower is better)
Translates to: NWIHQMMPKVFS*QVPTRDLFKQT
Trigger: GGTTTGTTTGAAGAGATCTCGTGTGGGTACTTGTCATGAAAACACCTTGGGCATCATCTGGTGTATCCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR TCA 72 bp CAGCTAGCAAGTGACCAGTTAGAACTCAGGTTTGTCTaGTTTTATACCCACTGCGTTCTGCACATCACTGTT +
Preference number: 3 (lower is better)
Translates to: QLASDQLELRFV*FYTHCVLHITV
Trigger: AACAGTGATGTGCAGAACGCAGTGGGTATAAAATCAGACAAACCTGAGTTCTAACTGGTCACTTGCTAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR GCA 72 bp CAGATGCCAGGCAGTAGTTACCAATCCAAGGTGAGGTaGTCAAGTTCAAAACCTGACCTTAGTTGTAAAAGT +
Preference number: 3 (lower is better)
Translates to: QMPGSSYQSKVR*SSSKPDLSCKS
Trigger: ACTTTTACAACTAAGGTCAGGTTTTGAACTTGAGCACCTCACCTTGGATTGGTAACTACTGCCTGGCATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR-3UTR CAA 90 bp AATAAGACACACACTGAAAGAAAATCACAGTATTGCCTCCAATGCAATAGTTACTTCCCACAGCTCCACTaGCTCAAGGAAGTCTCGGTG +
Preference number: 3 (lower is better)
Translates to: NKTHTERKSQYCLQCNSYFPQLH*LKEVSV
Trigger: CACCGAGACTTCCTTGAGCAAGTGGAGCTGTGGGAA...GTAACTATTGCATTGGAGGCAATACTGTGATTTTCTTTCAGTGTGTGTCTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR-3UTR CAA 90 bp AAAAGGGTTTGCCTGTTTTGTTCACTTGCTGTATCCTCAGGACCTAGAGTAGCAAAGGAAGGAAAAACATaGGCTGTGCTCGTGAAAGTA +
Preference number: 3 (lower is better)
Translates to: KRVCLFCSLAVSSGPRVAKEGKT*AVLVKV
Trigger: TACTTTCACGAGCACAGCCAATGTTTTTCCTTCCTT...TGCTACTCTAGGTCCTGAGGATACAGCAAGTGAACAAAACAGGCAAACCCTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR GCA 72 bp TCTTGTTCATCGCTGTATCTCCGGCACCCTATATCCTaGCTAGCTCAATACACTAAGTGCTCAAATAAAATA +
Preference number: 3 (lower is better)
Translates to: SCSSLYLRHPIS*LAQYTKCSNKI
Trigger: TATTTTATTTGAGCACTTAGTGTATTGAGCTAGGCAGGATATAGGGTGCCGGAGATACAGCGATGAACAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR GCA 72 bp AACTCAGGTTTGTCTGATTTTATACCCACTGCGTTCTaGACATCACTGTTGCCTGGTTTAACTGCAAACTTT +
Preference number: 3 (lower is better)
Translates to: NSGLSDFIPTAF*TSLLPGLTANF
Trigger: AAAGTTTGCAGTTAAACCAGGCAACAGTGATGTGCAGAACGCAGTGGGTATAAAATCAGACAAACCTGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR-3UTR CAA 90 bp GGATTCTTTCACCTGAAAAACGGAGTCCAAATCTGGGGCAGGCAAATAATGAAACCTCAGTATAAACACTaGATATCGCCTATTAGGATA +
Preference number: 3 (lower is better)
Translates to: GFFHLKNGVQIWGRQIMKPQYKH*ISPIRI
Trigger: TATCCTAATAGGCGATATCAAGTGTTTATACTGAGG...TTTCATTATTTGCCTGCCCCAGATTTGGACTCCGTTTTTCAGGTGAAAGAATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR TCA 72 bp TACTTTGCCTCACATTGTACTGATCTCTTTGGTAATTaGGAGATGTGGCACCTAAATAACCATAAAATGAGG +
Preference number: 3 (lower is better)
Translates to: YFASHCTDLFGN*EMWHLNNHKMR
Trigger: CCTCATTTTATGGTTATTTAGGTGCCACATCTCTCAATTACCAAAGAGATCAGTACAATGTGAGGCAAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR TCA 72 bp TTTGCTGCTGAATTCACAAGACAATGTGTGACCTTCTaGCATATGCCAATATTTTTCCATCTAGCATACTGT +
Preference number: 3 (lower is better)
Translates to: FAAEFTRQCVTF*HMPIFFHLAYC
Trigger: ACAGTATGCTAGATGGAAAAATATTGGCATATGTCAGAAGGTCACACATTGTCTTGTGAATTCAGCAGCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR CCA 72 bp TCCCCTCACCATAACAACCCAATAAAGTGGTTAACTTaGATGAATGTCAAATCTTACAGCCCTCTATTATTT +
Preference number: 3 (lower is better)
Translates to: SPHHNNPIKWLT*MNVKSYSPLLF
Trigger: AAATAATAGAGGGCTGTAAGATTTGACATTCATCCAAGTTAACCACTTTATTGGGTTGTTATGGTGAGGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR TCA 72 bp GAAACCATTATACACCTATCCCTTGACGTTATGAAATaGTCGAATTCATGTCAAACATTTGGTCATTCTGCT +
Preference number: 3 (lower is better)
Translates to: ETIIHLSLDVMK*SNSCQTFGHSA
Trigger: AGCAGAATGACCAAATGTTTGACATGAATTCGATCATTTCATAACGTCAAGGGATAGGTGTATAATGGTTTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR TCA 72 bp AGATGTGGCAAAGGAAACCATTATACACCTATCCCTTaGCGTTATGAAATGATCGAATTCATGTCAAACATT +
Preference number: 3 (lower is better)
Translates to: RCGKGNHYTPIP*RYEMIEFMSNI
Trigger: AATGTTTGACATGAATTCGATCATTTCATAACGTCAAGGGATAGGTGTATAATGGTTTCCTTTGCCACATCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR TCA 72 bp CAAAGGAAACCATTATACACCTATCCCTTGACGTTATaGAATGATCGAATTCATGTCAAACATTTGGTCATT +
Preference number: 3 (lower is better)
Translates to: QRKPLYTYPLTL*NDRIHVKHLVI
Trigger: AATGACCAAATGTTTGACATGAATTCGATCATTTCATAACGTCAAGGGATAGGTGTATAATGGTTTCCTTTG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR TCA 72 bp CTCACTAGATTTATGTTCGGAAATATGGGCTATTGTTaGACTCTCTCTCGAATAACTCTCAGATACATTTTT +
Preference number: 3 (lower is better)
Translates to: LTRFMFGNMGYC*TLSRITLRYIF
Trigger: AAAAATGTATCTGAGAGTTATTCGAGAGAGAGTTCAACAATAGCCCATATTTCCGAACATAAATCTAGTGAG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR CAA 72 bp GTCCGGGGAGCCGCTGCCCGTGACAGCCGCGCTGGCTaGGGAGGCTCTTCGGGCGGCCGACGCCTCGGTGGG +
Preference number: 4 (lower is better)
Translates to: VRGAAARDSRAG*GGSSGGRRLGG
Trigger: CCCACCGAGGCGTCGGCCGCCCGAAGAGCCTCCCAAGCCAGCGCGGCTGTCACGGGCAGCGGCTCCCCGGAC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR TCA 90 bp GGCTCTTCGGGCGGCCGACGCCTCGGTGGGGCCGCGACTCCCGTCAGGGAAGCTGGGAGCCGCTGCCCGTaGCAGCCGCGCTGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: GSSGGRRLGGAATPVREAGSRCP*QPRWLG
Trigger: CCCAAGCCAGCGCGGCTGTCACGGGCAGCGGCTCCC...AGCTTCCCTGACGGGAGTCGCGGCCCCACCGAGGCGTCGGCCGCCCGAAGAGCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR TCA 90 bp CGCTGGCTTGGGAGGCTCTTCGGGCGGCCGACGCCTCGGTGGGGCCGCGACTCCCAGCGGACGCAGAACTaGCTAGGCAGCGGCGGCACC +
Preference number: 4 (lower is better)
Translates to: RWLGRLFGRPTPRWGRDSQRTQN*LGSGGT
Trigger: GGTGCCGCCGCTGCCTAGTCAGTTCTGCGTCCGCTG...GGAGTCGCGGCCCCACCGAGGCGTCGGCCGCCCGAAGAGCCTCCCAAGCCAGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR CCA 90 bp CGCTGGCTTGGGAGGCTCTTCGGGCGGCCGACGCCTCGGTGGGGCCGCGACTCCGGCCGAAGGCGGTGCTaGCATCTGGCTGGCTTCGCT +
Preference number: 4 (lower is better)
Translates to: RWLGRLFGRPTPRWGRDSGRRRC*HLAGFA
Trigger: AGCGAAGCCAGCCAGATGCCAGCACCGCCTTCGGCC...GGAGTCGCGGCCCCACCGAGGCGTCGGCCGCCCGAAGAGCCTCCCAAGCCAGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR GCA 90 bp GGCCGGGGCCTTCTGGGACCCCCAAGTGCCGTGCAGGACGCCACGAAGTTGCGCCAAACACGGCGCAGCTaGCCCGCGCGGCAGTCGCAG +
Preference number: 4 (lower is better)
Translates to: GRGLLGPPSAVQDATKLRQTRRS*PARQSQ
Trigger: CTGCGACTGCCGCGCGGGGCAGCTGCGCCGTGTTTG...GCGCAACTTCGTGGCGTCCTGCACGGCACTTGGGGGTCCCAGAAGGCCCCGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR CCA 90 bp CAGACCCTTCCCCTGGATCCCAACGCCCTTTCGGCTCCTCCGCGGCCCCCGCCAAGCGTCTGGGGGCGCTaGGGGATCGAGGCGCGAAGC +
Preference number: 4 (lower is better)
Translates to: QTLPLDPNALSAPPRPPPSVWGR*GIEARS
Trigger: GCTTCGCGCCTCGATCCCCCAGCGCCCCCAGACGCT...TGGCGGGGGCCGCGGAGGAGCCGAAAGGGCGTTGGGATCCAGGGGAAGGGTCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR GCA 90 bp GGCTCTTCGGGCGGCCGACGCCTCGGTGGGGCCGCGACTCCCGTCAGGGAAGCTTCTGGGACCCCCAAGTaGCGTGCAGGACGCCACGAA +
Preference number: 4 (lower is better)
Translates to: GSSGGRRLGGAATPVREASGTPK*RAGRHE
Trigger: TTCGTGGCGTCCTGCACGGCACTTGGGGGTCCCAGA...AGCTTCCCTGACGGGAGTCGCGGCCCCACCGAGGCGTCGGCCGCCCGAAGAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR CCA 90 bp CAGAACAGAGGGGCCGCCCTCGCTCAGAGGGCGTCTGGAGTCACTGGGGGCTGGGGCTGCTGCCAGCCTTaGAGGCAGAGCTGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: QNRGAALAQRASGVTGGWGCCQP*RQSCRS
Trigger: GCTCCGGCAGCTCTGCCTCCAAGGCTGGCAGCAGCC...CCAGCCCCCAGTGACTCCAGACGCCCTCTGAGCGAGGGCGGCCCCTCTGTTCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR CCA 90 bp CAGAACAGAGGGGCCGCCCTCGCTCAGAGGGCGTCTGGAGTCACTGGGGGCTGGAGCAGAGCGAGTGGTTaGAGGCCCTGGGGGACGTGC +
Preference number: 4 (lower is better)
Translates to: QNRGAALAQRASGVTGGWSRASG*RPWGTC
Trigger: GCACGTCCCCCAGGGCCTCCAACCACTCGCTCTGCT...CCAGCCCCCAGTGACTCCAGACGCCCTCTGAGCGAGGGCGGCCCCTCTGTTCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR CCA 90 bp CAGACCCTTCCCCTGGATCCCAACGCCCTTTCGGCTCCTCCGCGGCCCCCGCCAGGCGGTGCTGGCATCTaGCTGGCTTCGCTCATGAGG +
Preference number: 4 (lower is better)
Translates to: QTLPLDPNALSAPPRPPPGGAGI*LASLMR
Trigger: CCTCATGAGCGAAGCCAGCCAGATGCCAGCACCGCC...TGGCGGGGGCCGCGGAGGAGCCGAAAGGGCGTTGGGATCCAGGGGAAGGGTCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR GCA 90 bp GGCCGGGGCCTTCTGGGACCCCCAAGTGCCGTGCAGGACGCCACGAAGTTGCGCAGGGTTCTCCAGCTGTaGCTCGTCTTCTCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: GRGLLGPPSAVQDATKLRRVLQL*LVFSGA
Trigger: GGCCCCAGAGAAGACGAGGCACAGCTGGAGAACCCT...GCGCAACTTCGTGGCGTCCTGCACGGCACTTGGGGGTCCCAGAAGGCCCCGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR GCA 90 bp AGGAGGGTCCCGCAGGTGGGCGGCCTCCTCAGGCCGGGGCCTTCTGGGACCCCCGCACACACATGTCAGTaGTCTACTGGGACACCTGGT +
Preference number: 4 (lower is better)
Translates to: RRVPQVGGLLRPGPSGTPAHTCQ*STGTPG
Trigger: ACCAGGTGTCCCAGTAGAGCACTGACATGTGTGTGC...GGGGGTCCCAGAAGGCCCCGGCCTGAGGAGGCCGCCCACCTGCGGGACCCTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR CCA 90 bp GGCTCTTCGGGCGGCCGACGCCTCGGTGGGGCCGCGACTCCCGTCAGGGAAGCTAGTTCACACGGTGGCTaGCACTCAGGCACACACATG +
Preference number: 4 (lower is better)
Translates to: GSSGGRRLGGAATPVREASSHGG*HSGTHM
Trigger: CATGTGTGTGCCTGAGTGCCAGCCACCGTGTGAACT...AGCTTCCCTGACGGGAGTCGCGGCCCCACCGAGGCGTCGGCCGCCCGAAGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR CCA 90 bp CGCTGGCTTGGGAGGCTCTTCGGGCGGCCGACGCCTCGGTGGGGCCGCGACTCCAAAGAGTTCACACGGTaGCTGGCACTCAGGCACACA +
Preference number: 4 (lower is better)
Translates to: RWLGRLFGRPTPRWGRDSKEFTR*LALRHT
Trigger: TGTGTGCCTGAGTGCCAGCCACCGTGTGAACTCTTT...GGAGTCGCGGCCCCACCGAGGCGTCGGCCGCCCGAAGAGCCTCCCAAGCCAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR TCA 90 bp CAGACCCTTCCCCTGGATCCCAACGCCCTTTCGGCTCCTCCGCGGCCCCCGCCACAGGCTGGAGCACAGTaGCTCCATCTCTGCAACCTC +
Preference number: 4 (lower is better)
Translates to: QTLPLDPNALSAPPRPPPQAGAQ*LHLCNL
Trigger: GAGGTTGCAGAGATGGAGTCACTGTGCTCCAGCCTG...TGGCGGGGGCCGCGGAGGAGCCGAAAGGGCGTTGGGATCCAGGGGAAGGGTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR CCA 90 bp CCAGCATCTTCCCAGTTCCCTGTAGGTCACGAGGGGCCACTTCTCCCACTTCCTGCGAGGACTCGGCCCTaGCTCCGGGGGCGGTACGGA +
Preference number: 4 (lower is better)
Translates to: PASSQFPVGHEGPLLPLPARTRP*LRGRYG
Trigger: TCCGTACCGCCCCCGGAGCCAGGGCCGAGTCCTCGC...AGGAAGTGGGAGAAGTGGCCCCTCGTGACCTACAGGGAACTGGGAAGATGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp CTCTGTCTCAGGCCACCTGGCATGCGGCATGGGAGCAGCAGGAAATGCGGTCTGCCGGAGCAGAGCGAGTaGTTGGAGGCCCTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: LCLRPPGMRHGSSRKCGLPEQSE*LEALGD
Trigger: GTCCCCCAGGGCCTCCAACCACTCGCTCTGCTCCGG...CAGACCGCATTTCCTGCTGCTCCCATGCCGCATGCCAGGTGGCCTGAGACAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp CTCTGTCTCAGGCCACCTGGCATGCGGCATGGGAGCAGCAGGAAATGCGGTCTGGGTGCCCGAGCTCTCTaGGTACGGGCCAGACGTGTC +
Preference number: 4 (lower is better)
Translates to: LCLRPPGMRHGSSRKCGLGARAL*VRARRV
Trigger: GACACGTCTGGCCCGTACTCAGAGAGCTCGGGCACC...CAGACCGCATTTCCTGCTGCTCCCATGCCGCATGCCAGGTGGCCTGAGACAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp GCGGCCTCACCTCGAACCCATGCGGGATCTTCCAAGAGTGCAATTCCCACAGCTAGGACGCCACGAAGTTaGGCCCGAGCCCGCGGGGTC +
Preference number: 4 (lower is better)
Translates to: AASPRTHAGSSKSAIPTARTPRS*ARARGV
Trigger: GACCCCGCGGGCTCGGGCGCAACTTCGTGGCGTCCT...AGCTGTGGGAATTGCACTCTTGGAAGATCCCGCATGGGTTCGAGGTGAGGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR TCA 90 bp AGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCAACGACGACAGCGAGGCGGTaGCCGAGCCTCAGCGGACGC +
Preference number: 4 (lower is better)
Translates to: RLLQWEAHCSHVLCGFPTTTARR*PSLSGR
Trigger: GCGTCCGCTGAGGCTCGGTCACCGCCTCGCTGTCGT...CGTTGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433197.4
CDS-3UTR GCA 90 bp CTCTGTCTCAGGCCACCTGGCATGCGGCATGGGAGCAGCAGGAAATGCGGTCTGCCAGCAAAGGAAGTGTaGTGCCGCGGGGCACGACAG +
Preference number: 4 (lower is better)
Translates to: LCLRPPGMRHGSSRKCGLPAKEV*CRGARQ
Trigger: CTGTCGTGCCCCGCGGCAGCACACTTCCTTTGCTGG...CAGACCGCATTTCCTGCTGCTCCCATGCCGCATGCCAGGTGGCCTGAGACAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp CCAGCATCTTCCCAGTTCCCTGTAGGTCACGAGGGGCCACTTCTCCCACTTCCTAGTGGTTGGAGGCCCTaGGGGACGTGCTGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: PASSQFPVGHEGPLLPLPSGWRP*GTCWGC
Trigger: GCAGCCCCAGCACGTCCCCCAGGGCCTCCAACCACT...AGGAAGTGGGAGAAGTGGCCCCTCGTGACCTACAGGGAACTGGGAAGATGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp CCCAGTTCCCAGAGGATCACAAGGCCAAGGATCCAATGGGCACACCATGAGGACAGGAGCTCGCCGTCCTaGGCCGTGTCTCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: PSSQRITRPRIQWAHHEDRSSPS*AVSPGG
Trigger: CCCACCTGGAGACACGGCTCAGGACGGCGAGCTCCT...GTCCTCATGGTGTGCCCATTGGATCCTTGGCCTTGTGATCCTCTGGGAACTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp CGCTGGCTTGGGAGGCTCTTCGGGCGGCCGACGCCTCGGTGGGGCCGCGACTCCAAGGATTCTTTCACCTaGAAAACGGAGTCCAAATCT +
Preference number: 4 (lower is better)
Translates to: RWLGRLFGRPTPRWGRDSKDSFT*KTESKS
Trigger: AGATTTGGACTCCGTTTTTCAGGTGAAAGAATCCTT...GGAGTCGCGGCCCCACCGAGGCGTCGGCCGCCCGAAGAGCCTCCCAAGCCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR TCA 90 bp CCTCCCGCCACATCAACTCTGTGCTCCTCCTCTACCGTGCCAGGGACACTCCCAGTGGCCACACACTCCTaGGAGAGCTGGTCTTTGGGC +
Preference number: 4 (lower is better)
Translates to: PPATSTLCSSSTVPGTLPVATHS*ESWSLG
Trigger: GCCCAAAGACCAGCTCTCTCAGGAGTGTGTGGCCAC...TGGGAGTGTCCCTGGCACGGTAGAGGAGGAGCACAGAGTTGATGTGGCGGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR GCA 90 bp CCAGCATCTTCCCAGTTCCCTGTAGGTCACGAGGGGCCACTTCTCCCACTTCCTCGTCTCCCGCACCTCTaGAGGCAGCTCCCGGTAGTG +
Preference number: 4 (lower is better)
Translates to: PASSQFPVGHEGPLLPLPRLPHL*RQLPVV
Trigger: CACTACCGGGAGCTGCCTGCAGAGGTGCGGGAGACG...AGGAAGTGGGAGAAGTGGCCCCTCGTGACCTACAGGGAACTGGGAAGATGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp CAGAACAGAGGGGCCGCCCTCGCTCAGAGGGCGTCTGGAGTCACTGGGGGCTGGGGTGGGAAGAAACTCTaGTGGATCTACTCACCTGCA +
Preference number: 4 (lower is better)
Translates to: QNRGAALAQRASGVTGGWGGKKL*WIYSPA
Trigger: TGCAGGTGAGTAGATCCAGCAGAGTTTCTTCCCACC...CCAGCCCCCAGTGACTCCAGACGCCCTCTGAGCGAGGGCGGCCCCTCTGTTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR CAA 72 bp GCCCTGACTCACCACGAGCCTCTTGTTCCACCGGCCTaGGGGACGAAGGAGTTTGACTGCCTACTCGCTGGC +
Preference number: 4 (lower is better)
Translates to: ALTHHEPLVPPA*GTKEFDCLLAG
Trigger: GCCAGCGAGTAGGCAGTCAAACTCCTTCGTCCCCAAGGCCGGTGGAACAAGAGGCTCGTGGTGAGTCAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp AGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCAACGGGTGCCCGAGCTCTCTaGGTACGGGCCAGACGTGTC +
Preference number: 4 (lower is better)
Translates to: RLLQWEAHCSHVLCGFPTGARAL*VRARRV
Trigger: GACACGTCTGGCCCGTACTCAGAGAGCTCGGGCACC...CGTTGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp CTCTGTCTCAGGCCACCTGGCATGCGGCATGGGAGCAGCAGGAAATGCGGTCTGGAGCACATGCTTCGCTaGGGGGCGTTTCTGAGGATC +
Preference number: 4 (lower is better)
Translates to: LCLRPPGMRHGSSRKCGLEHMLR*GAFLRI
Trigger: GATCCTCAGAAACGCCCCTCAGCGAAGCATGTGCTC...CAGACCGCATTTCCTGCTGCTCCCATGCCGCATGCCAGGTGGCCTGAGACAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp GGCCGGGGCCTTCTGGGACCCCCAAGTGCCGTGCAGGACGCCACGAAGTTGCGCTCTATTAAGCACGTGTaGAGGTGGTGCCTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: GRGLLGPPSAVQDATKLRSIKHV*RWCLLS
Trigger: TGAAAGAAGGCACCACCTTCACACGTGCTTAATAGA...GCGCAACTTCGTGGCGTCCTGCACGGCACTTGGGGGTCCCAGAAGGCCCCGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR TCA 90 bp CAGACCCTTCCCCTGGATCCCAACGCCCTTTCGGCTCCTCCGCGGCCCCCGCCATTTTCTCCTGTGCTCTaGGAAGCTACATTACTGCAG +
Preference number: 4 (lower is better)
Translates to: QTLPLDPNALSAPPRPPPFSPVL*EATLLQ
Trigger: CTGCAGTAATGTAGCTTCTCAGAGCACAGGAGAAAA...TGGCGGGGGCCGCGGAGGAGCCGAAAGGGCGTTGGGATCCAGGGGAAGGGTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR GCA 90 bp CTCTGTCTCAGGCCACCTGGCATGCGGCATGGGAGCAGCAGGAAATGCGGTCTGCCCGGTACACAATTGTaGCCTCAGCTCCATGGCCCA +
Preference number: 4 (lower is better)
Translates to: LCLRPPGMRHGSSRKCGLPGTQL*PQLHGP
Trigger: TGGGCCATGGAGCTGAGGGCACAATTGTGTACCGGG...CAGACCGCATTTCCTGCTGCTCCCATGCCGCATGCCAGGTGGCCTGAGACAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp CCAGCATCTTCCCAGTTCCCTGTAGGTCACGAGGGGCCACTTCTCCCACTTCCTCCCGAGGTGGTCTGCTaGAGCAAGGTGATGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PASSQFPVGHEGPLLPLPPEVVC*SKVMGS
Trigger: GGAGCCCATCACCTTGCTGCAGCAGACCACCTCGGG...AGGAAGTGGGAGAAGTGGCCCCTCGTGACCTACAGGGAACTGGGAAGATGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp CTCTGTCTCAGGCCACCTGGCATGCGGCATGGGAGCAGCAGGAAATGCGGTCTGACGAAGGAGTTTGACTaGCTACTCGCTGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LCLRPPGMRHGSSRKCGLTKEFD*LLAGPG
Trigger: CCCTGGGCCAGCGAGTAGGCAGTCAAACTCCTTCGT...CAGACCGCATTTCCTGCTGCTCCCATGCCGCATGCCAGGTGGCCTGAGACAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp CTCTGTCTCAGGCCACCTGGCATGCGGCATGGGAGCAGCAGGAAATGCGGTCTGTCACCAGGCCTGAGCTaGAATGATCCCCCAACTGGC +
Preference number: 4 (lower is better)
Translates to: LCLRPPGMRHGSSRKCGLSPGLS*NDPPTG
Trigger: GCCAGTTGGGGGATCATTGCAGCTCAGGCCTGGTGA...CAGACCGCATTTCCTGCTGCTCCCATGCCGCATGCCAGGTGGCCTGAGACAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp GGCCGGGGCCTTCTGGGACCCCCAAGTGCCGTGCAGGACGCCACGAAGTTGCGCTTTCTTCCTTTTCCTTaGCCTCAGGAATTCCCCTCA +
Preference number: 4 (lower is better)
Translates to: GRGLLGPPSAVQDATKLRFLPFP*PQEFPS
Trigger: TGAGGGGAATTCCTGAGGGCAAGGAAAAGGAAGAAA...GCGCAACTTCGTGGCGTCCTGCACGGCACTTGGGGGTCCCAGAAGGCCCCGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR GCA 90 bp CCAGCATCTTCCCAGTTCCCTGTAGGTCACGAGGGGCCACTTCTCCCACTTCCTTGGGCCGCAGAGCACTaGTTCCCGGAGCTTCACCTG +
Preference number: 4 (lower is better)
Translates to: PASSQFPVGHEGPLLPLPWAAEH*FPELHL
Trigger: CAGGTGAAGCTCCGGGAAGCAGTGCTCTGCGGCCCA...AGGAAGTGGGAGAAGTGGCCCCTCGTGACCTACAGGGAACTGGGAAGATGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR CCA 90 bp GCACCTTCTCCACCTTCTGATCCTCTCTTGGGTTACTGCCAAAGCCCACAGGTAGGCCGGGCAGGGGCATaGGCGGGCTTCTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: APSPPSDPLLGYCQSPQVGRAGA*AGFSST
Trigger: TGTGGAGGAGAAGCCCGCCCATGCCCCTGCCCGGCC...TACCTGTGGGCTTTGGCAGTAACCCAAGAGAGGATCAGAAGGTGGAGAAGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp CCAGCATCTTCCCAGTTCCCTGTAGGTCACGAGGGGCCACTTCTCCCACTTCCTGCCCTCAGTCACAGCTaGGGCCACCAGAACAGAGGG +
Preference number: 4 (lower is better)
Translates to: PASSQFPVGHEGPLLPLPALSHS*GHQNRG
Trigger: CCCTCTGTTCTGGTGGCCCCAGCTGTGACTGAGGGC...AGGAAGTGGGAGAAGTGGCCCCTCGTGACCTACAGGGAACTGGGAAGATGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp ATCACCTGGGTACTCCCAAAGAGAAAACCTGTGCTGAGAACGAGCTGGGCTGGGCAGGACGACACCCTCTaGACTCCGTCCTCCCCCTCC +
Preference number: 4 (lower is better)
Translates to: ITWVLPKRKPVLRTSWAGQDDTL*TPSSPS
Trigger: GGAGGGGGAGGACGGAGTTCAGAGGGTGTCGTCCTG...CCCAGCCCAGCTCGTTCTCAGCACAGGTTTTCTCTTTGGGAGTACCCAGGTGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp CCCAGTTCCCAGAGGATCACAAGGCCAAGGATCCAATGGGCACACCATGAGGACAGAACACGGCGGGAGTaGGAACACCTGCGCACCCAG +
Preference number: 4 (lower is better)
Translates to: PSSQRITRPRIQWAHHEDRTRRE*EHLRTQ
Trigger: CTGGGTGCGCAGGTGTTCTCACTCCCGCCGTGTTCT...GTCCTCATGGTGTGCCCATTGGATCCTTGGCCTTGTGATCCTCTGGGAACTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp GGCCGGGGCCTTCTGGGACCCCCAAGTGCCGTGCAGGACGCCACGAAGTTGCGCGAACTCAGGTTTGTCTaGTTTTATACCCACTGCGTT +
Preference number: 4 (lower is better)
Translates to: GRGLLGPPSAVQDATKLRELRFV*FYTHCV
Trigger: AACGCAGTGGGTATAAAATCAGACAAACCTGAGTTC...GCGCAACTTCGTGGCGTCCTGCACGGCACTTGGGGGTCCCAGAAGGCCCCGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR TCA 90 bp CCTCCCGCCACATCAACTCTGTGCTCCTCCTCTACCGTGCCAGGGACACTCCCAACCAGGGTTTACCTCTaGCACCCCACTTCACAGAGC +
Preference number: 4 (lower is better)
Translates to: PPATSTLCSSSTVPGTLPTRVYL*HPTSQS
Trigger: GCTCTGTGAAGTGGGGTGTCAGAGGTAAACCCTGGT...TGGGAGTGTCCCTGGCACGGTAGAGGAGGAGCACAGAGTTGATGTGGCGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR TCA 90 bp CCTCCCGCCACATCAACTCTGTGCTCCTCCTCTACCGTGCCAGGGACACTCCCAAGGGCCCCATCTTCATaGTTATCTCCCAAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: PPATSTLCSSSTVPGTLPRAPSS*LSPKGP
Trigger: GGGGCCTTTGGGAGATAATCATGAAGATGGGGCCCT...TGGGAGTGTCCCTGGCACGGTAGAGGAGGAGCACAGAGTTGATGTGGCGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR GCA 90 bp GCTACTCGCGCTGTCTCTGAGGCCCTCCTTTGCAGACATCATGACCGTAAGGCTCCAGCAAAGGAAGTGTaGTGCCGCGGGGCACGACAG +
Preference number: 4 (lower is better)
Translates to: ATRAVSEALLCRHHDRKAPAKEV*CRGARQ
Trigger: CTGTCGTGCCCCGCGGCAGCACACTTCCTTTGCTGG...AGCCTTACGGTCATGATGTCTGCAAAGGAGGGCCTCAGAGACAGCGCGAGTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp ATCACCTGGGTACTCCCAAAGAGAAAACCTGTGCTGAGAACGAGCTGGGCTGGGGGGTGGAAGGGCAGCTaGTGCTGCTGCTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: ITWVLPKRKPVLRTSWAGGWKGS*CCCCCR
Trigger: CCTGCAGCAGCAGCAGCAGCAGCTGCCCTTCCACCC...CCCAGCCCAGCTCGTTCTCAGCACAGGTTTTCTCTTTGGGAGTACCCAGGTGAT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp CTCTGTCTCAGGCCACCTGGCATGCGGCATGGGAGCAGCAGGAAATGCGGTCTGCTGGACCTCACGGTCTaGGAAGCTAAAACACTCGGG +
Preference number: 4 (lower is better)
Translates to: LCLRPPGMRHGSSRKCGLLDLTV*EAKTLG
Trigger: CCCGAGTGTTTTAGCTTCGCAGACCGTGAGGTCCAG...CAGACCGCATTTCCTGCTGCTCCCATGCCGCATGCCAGGTGGCCTGAGACAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp GACAGAGAAAGGAACGGCTCTGGGAAAGCCAAACCTGGCCAAAGTCCAACTTCCGGCCCGGTAGGTGTGTaGGAGGAGGTGGGGGAAGCG +
Preference number: 4 (lower is better)
Translates to: DRERNGSGKAKPGQSPTSGPVGV*EEVGEA
Trigger: CGCTTCCCCCACCTCCTCGCACACACCTACCGGGCC...GGAAGTTGGACTTTGGCCAGGTTTGGCTTTCCCAGAGCCGTTCCTTTCTCTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp CCAGCATCTTCCCAGTTCCCTGTAGGTCACGAGGGGCCACTTCTCCCACTTCCTGCCTCTGACCACCACTaGACTGAGAACACGGCGGGA +
Preference number: 4 (lower is better)
Translates to: PASSQFPVGHEGPLLPLPASDHH*TENTAG
Trigger: TCCCGCCGTGTTCTCAGTGCAGTGGTGGTCAGAGGC...AGGAAGTGGGAGAAGTGGCCCCTCGTGACCTACAGGGAACTGGGAAGATGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp CGCTGGCTTGGGAGGCTCTTCGGGCGGCCGACGCCTCGGTGGGGCCGCGACTCCCAGTATTGCCTCCAATaGAATAGTTACTACATCAAT +
Preference number: 4 (lower is better)
Translates to: RWLGRLFGRPTPRWGRDSQYCLQ*NSYYIN
Trigger: ATTGATGTAGTAACTATTGCATTGGAGGCAATACTG...GGAGTCGCGGCCCCACCGAGGCGTCGGCCGCCCGAAGAGCCTCCCAAGCCAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR CCA 90 bp CTCTGTCTCAGGCCACCTGGCATGCGGCATGGGAGCAGCAGGAAATGCGGTCTGTGGCCTCTGTCTCCTTaGGGAACGGGTACTTCCACT +
Preference number: 4 (lower is better)
Translates to: LCLRPPGMRHGSSRKCGLWPLSP*GTGTST
Trigger: AGTGGAAGTACCCGTTCCCCAAGGAGACAGAGGCCA...CAGACCGCATTTCCTGCTGCTCCCATGCCGCATGCCAGGTGGCCTGAGACAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp TGTCCAACCTGGGAGGGTGGAATTTCGGCTCACCTGGAGAGGATGCCTGATGACGTGTCTCCAGGTGGGTaGAAGGGCAGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: CPTWEGGISAHLERMPDDVSPGG*KGSCCC
Trigger: GCAGCAGCAGCTGCCCTTCCACCCACCTGGAGACAC...GTCATCAGGCATCCTCTCCAGGTGAGCCGAAATTCCACCCTCCCAGGTTGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp CTCTGTCTCAGGCCACCTGGCATGCGGCATGGGAGCAGCAGGAAATGCGGTCTGGATTCTCGCAACAGCTaGACCTCACGGTCTGCGAAG +
Preference number: 4 (lower is better)
Translates to: LCLRPPGMRHGSSRKCGLDSRNS*TSRSAK
Trigger: CTTCGCAGACCGTGAGGTCCAGCTGTTGCGAGAATC...CAGACCGCATTTCCTGCTGCTCCCATGCCGCATGCCAGGTGGCCTGAGACAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp CCCTCCTTTGCAGACATCATGACCGTAAGGCTTTTGGGGCCAGCATCTTCCCAGCACTGTTCTGGCCACTaGCACTGGGCCACGGCTGCC +
Preference number: 4 (lower is better)
Translates to: PSFADIMTVRLLGPASSQHCSGH*HWATAA
Trigger: GGCAGCCGTGGCCCAGTGCCAGTGGCCAGAACAGTG...CTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAAGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp CCCAGTTCCCAGAGGATCACAAGGCCAAGGATCCAATGGGCACACCATGAGGACGGTACTTCCACTTTGTaGTGCGCCCCACCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: PSSQRITRPRIQWAHHEDGTSTL*CAPPPQ
Trigger: CTGGGGAGGTGGGGCGCATCACAAAGTGGAAGTACC...GTCCTCATGGTGTGCCCATTGGATCCTTGGCCTTGTGATCCTCTGGGAACTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp ATCACCTGGGTACTCCCAAAGAGAAAACCTGTGCTGAGAACGAGCTGGGCTGGGCCTTGTCCCCAATGGTaGCGCCATCAGTCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: ITWVLPKRKPVLRTSWAGPCPQW*RHQSGA
Trigger: GGCCCCAGACTGATGGCGTCACCATTGGGGACAAGG...CCCAGCCCAGCTCGTTCTCAGCACAGGTTTTCTCTTTGGGAGTACCCAGGTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp GCACCTTCTCCACCTTCTGATCCTCTCTTGGGTTACTGCCAAAGCCCACAGGTACAGGACGACACCCTCTaGACTCCGTCCTCCCCCTCC +
Preference number: 4 (lower is better)
Translates to: APSPPSDPLLGYCQSPQVQDDTL*TPSSPS
Trigger: GGAGGGGGAGGACGGAGTTCAGAGGGTGTCGTCCTG...TACCTGTGGGCTTTGGCAGTAACCCAAGAGAGGATCAGAAGGTGGAGAAGGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp TCTGTGATCAATGAGAAATCTCACACTGCAGGACGACACCCTCTGAACTCCGTCTGCCCCAGGCGCTCCTaGGCACCACCCCGAGATGGC +
Preference number: 4 (lower is better)
Translates to: SVINEKSHTAGRHPLNSVCPRRS*APPRDG
Trigger: GCCATCTCGGGGTGGTGCTCAGGAGCGCCTGGGGCA...GACGGAGTTCAGAGGGTGTCGTCCTGCAGTGTGAGATTTCTCATTGATCACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp CCCAGTTCCCAGAGGATCACAAGGCCAAGGATCCAATGGGCACACCATGAGGACAGGGCTTTCTCCTGGTaGCCAGGAGGGTCCCATTCG +
Preference number: 4 (lower is better)
Translates to: PSSQRITRPRIQWAHHEDRAFSW*PGGSHS
Trigger: CGAATGGGACCCTCCTGGTCACCAGGAGAAAGCCCT...GTCCTCATGGTGTGCCCATTGGATCCTTGGCCTTGTGATCCTCTGGGAACTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp GCTACTCGCGCTGTCTCTGAGGCCCTCCTTTGCAGACATCATGACCGTAAGGCTAGGCCTGAGCTGCAATaGTCCCCCAACTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: ATRAVSEALLCRHHDRKARPELQ*SPNWLE
Trigger: CTCCAGCCAGTTGGGGGATCATTGCAGCTCAGGCCT...AGCCTTACGGTCATGATGTCTGCAAAGGAGGGCCTCAGAGACAGCGCGAGTAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp CCTCCCGCCACATCAACTCTGTGCTCCTCCTCTACCGTGCCAGGGACACTCCCAAAAGTACCATCACACTaGGGGCCAGGGCTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: PPATSTLCSSSTVPGTLPKVPSH*GPGLQL
Trigger: AAGCTGAAGCCCTGGCCCTCAGTGTGATGGTACTTT...TGGGAGTGTCCCTGGCACGGTAGAGGAGGAGCACAGAGTTGATGTGGCGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR GCA 90 bp CCAGCATCTTCCCAGTTCCCTGTAGGTCACGAGGGGCCACTTCTCCCACTTCCTGAGTGGGCGTCAGCTTaGTCTTGGCCTCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: PASSQFPVGHEGPLLPLPEWASA*SWPLSP
Trigger: AGGAGACAGAGGCCAAGAGCAAGCTGACGCCCACTC...AGGAAGTGGGAGAAGTGGCCCCTCGTGACCTACAGGGAACTGGGAAGATGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp CCCAGTTCCCAGAGGATCACAAGGCCAAGGATCCAATGGGCACACCATGAGGACGCAAAGGAAGTGTGCTaGCGCGGGGCACGACAGCAA +
Preference number: 4 (lower is better)
Translates to: PSSQRITRPRIQWAHHEDAKEVC*RGARQQ
Trigger: TTGCTGTCGTGCCCCGCGGCAGCACACTTCCTTTGC...GTCCTCATGGTGTGCCCATTGGATCCTTGGCCTTGTGATCCTCTGGGAACTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp ATCACCTGGGTACTCCCAAAGAGAAAACCTGTGCTGAGAACGAGCTGGGCTGGGCGATCCAGCCTTCTGTaGCAGGCACCCCAGATCGGC +
Preference number: 4 (lower is better)
Translates to: ITWVLPKRKPVLRTSWAGRSSLL*QAPQIG
Trigger: GCCGATCTGGGGTGCCTGGCACAGAAGGCTGGATCG...CCCAGCCCAGCTCGTTCTCAGCACAGGTTTTCTCTTTGGGAGTACCCAGGTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp CCCTCCTTTGCAGACATCATGACCGTAAGGCTTTTGGGGCCAGCATCTTCCCAGGCCGCTGCAGGGACTTaGCAAAAGGGTGGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: PSFADIMTVRLLGPASSQAAAGT*QKGGCP
Trigger: AGGGCAGCCACCCTTTTGGCAAGTCCCTGCAGCGGC...CTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAAGGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp TGCAAAGCCGGGAGGCATCAAGCTCTAATTGTGGTGACCAGGCCCTCAGTCACAGCCGCTGCAGGGACTTaGCAAAAGGGTGGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: CKAGRHQALIVVTRPSVTAAAGT*QKGGCP
Trigger: AGGGCAGCCACCCTTTTGGCAAGTCCCTGCAGCGGC...TGTGACTGAGGGCCTGGTCACCACAATTAGAGCTTGATGCCTCCCGGCTTTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp CAGAACAGAGGGGCCGCCCTCGCTCAGAGGGCGTCTGGAGTCACTGGGGGCTGGCTCTATCAATTCACGTaGAATGACGTCTTCGTGCTT +
Preference number: 4 (lower is better)
Translates to: QNRGAALAQRASGVTGGWLYQFT*NDVFVL
Trigger: AAGCACGAAGACGTCATTGCACGTGAATTGATAGAG...CCAGCCCCCAGTGACTCCAGACGCCCTCTGAGCGAGGGCGGCCCCTCTGTTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR GCA 90 bp AGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCAACGAGAGTCTCTCGTGGCTaGACAGCTCCATGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: RLLQWEAHCSHVLCGFPTRVSRG*TAPWPG
Trigger: ACCGGGCCATGGAGCTGTGCAGCCACGAGAGACTCT...CGTTGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp TGTCCAACCTGGGAGGGTGGAATTTCGGCTCACCTGGAGAGGATGCCTGATGACAGAGTCTCTCGTGGCTaGACAGCTCCATGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: CPTWEGGISAHLERMPDDRVSRG*TAPWPG
Trigger: ACCGGGCCATGGAGCTGTGCAGCCACGAGAGACTCT...GTCATCAGGCATCCTCTCCAGGTGAGCCGAAATTCCACCCTCCCAGGTTGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp ACCTCGAACCCATGCGGGATCTTCCAAGAGTGCAATTCCCACAGCTCCACTTGCACGGGCGGTCCCGGGTaGCTAGAAGCCTCCTTTTCG +
Preference number: 4 (lower is better)
Translates to: TSNPCGIFQECNSHSSTCTGGPG*LEASFS
Trigger: CGAAAAGGAGGCTTCTAGGCACCCGGGACCGCCCGT...GCAAGTGGAGCTGTGGGAATTGCACTCTTGGAAGATCCCGCATGGGTTCGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR GCA 90 bp ACCTCGAACCCATGCGGGATCTTCCAAGAGTGCAATTCCCACAGCTCCACTTGCGGGAAAGACCGGCAATaGCCCACCAGGCCGTCCCAT +
Preference number: 4 (lower is better)
Translates to: TSNPCGIFQECNSHSSTCGKDRQ*PTRPSH
Trigger: ATGGGACGGCCTGGTGGGGCATTGCCGGTCTTTCCC...GCAAGTGGAGCTGTGGGAATTGCACTCTTGGAAGATCCCGCATGGGTTCGAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR CCA 90 bp CTCTGTCTCAGGCCACCTGGCATGCGGCATGGGAGCAGCAGGAAATGCGGTCTGCTCTTCCACATGTGTTaGGACCTGCAGGACTGGATC +
Preference number: 4 (lower is better)
Translates to: LCLRPPGMRHGSSRKCGLLFHMC*DLQDWI
Trigger: GATCCAGTCCTGCAGGTCCCAACACATGTGGAAGAG...CAGACCGCATTTCCTGCTGCTCCCATGCCGCATGCCAGGTGGCCTGAGACAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp CCCTCCTTTGCAGACATCATGACCGTAAGGCTTTTGGGGCCAGCATCTTCCCAGACGTGCTGGGGCTGCTaGTGCCCGAGCTCTCTGAGT +
Preference number: 4 (lower is better)
Translates to: PSFADIMTVRLLGPASSQTCWGC*CPSSLS
Trigger: ACTCAGAGAGCTCGGGCACCAGCAGCCCCAGCACGT...CTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAAGGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp CCAGCATCTTCCCAGTTCCCTGTAGGTCACGAGGGGCCACTTCTCCCACTTCCTGTGTGTGCGAGGAGGTaGGGGAAGCGAGATGTGAAG +
Preference number: 4 (lower is better)
Translates to: PASSQFPVGHEGPLLPLPVCARR*GKRDVK
Trigger: CTTCACATCTCGCTTCCCCCACCTCCTCGCACACAC...AGGAAGTGGGAGAAGTGGCCCCTCGTGACCTACAGGGAACTGGGAAGATGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp CCCAGTTCCCAGAGGATCACAAGGCCAAGGATCCAATGGGCACACCATGAGGACAGGCTGGCCCCTGTCTaGGTCTTCGCTGCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: PSSQRITRPRIQWAHHEDRLAPV*VFAALL
Trigger: AAGGAGAGCAGCGAAGACCCAGACAGGGGCCAGCCT...GTCCTCATGGTGTGCCCATTGGATCCTTGGCCTTGTGATCCTCTGGGAACTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp CACAAAAGTCAGCGACCAGAGACCATGAGGGACATGGGCCGCAGAGCACTGCTTAGGCTGGCCCCTGTCTaGGTCTTCGCTGCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: HKSQRPETMRDMGRRALLRLAPV*VFAALL
Trigger: AAGGAGAGCAGCGAAGACCCAGACAGGGGCCAGCCT...AAGCAGTGCTCTGCGGCCCATGTCCCTCATGGTCTCTGGTCGCTGACTTTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR CCA 90 bp CCTCCCGCCACATCAACTCTGTGCTCCTCCTCTACCGTGCCAGGGACACTCCCAACCCATACTGGTCTGTaGATGGGTCTGTGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: PPATSTLCSSSTVPGTLPTHTGL*MGLWPV
Trigger: AACAGGCCACAGACCCATCCACAGACCAGTATGGGT...TGGGAGTGTCCCTGGCACGGTAGAGGAGGAGCACAGAGTTGATGTGGCGGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR TCA 90 bp CCAGCATCTTCCCAGTTCCCTGTAGGTCACGAGGGGCCACTTCTCCCACTTCCTCCTCCTCTCCCTTCCTaGAAGGCCTGTAGACTGACA +
Preference number: 4 (lower is better)
Translates to: PASSQFPVGHEGPLLPLPPPLPS*KACRLT
Trigger: TGTCAGTCTACAGGCCTTTCAGGAAGGGAGAGGAGG...AGGAAGTGGGAGAAGTGGCCCCTCGTGACCTACAGGGAACTGGGAAGATGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp CTCTGTCTCAGGCCACCTGGCATGCGGCATGGGAGCAGCAGGAAATGCGGTCTGAATTCCGGTCTCCAGTaGAGGCTGTACTTGGTGCAT +
Preference number: 4 (lower is better)
Translates to: LCLRPPGMRHGSSRKCGLNSGLQ*RLYLVH
Trigger: ATGCACCAAGTACAGCCTTCACTGGAGACCGGAATT...CAGACCGCATTTCCTGCTGCTCCCATGCCGCATGCCAGGTGGCCTGAGACAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp CTCTGTCTCAGGCCACCTGGCATGCGGCATGGGAGCAGCAGGAAATGCGGTCTGGAACTTTCCACTTGCTaGGCACAGTGGGAAACCAGA +
Preference number: 4 (lower is better)
Translates to: LCLRPPGMRHGSSRKCGLELSTC*AQWETR
Trigger: TCTGGTTTCCCACTGTGCTCAGCAAGTGGAAAGTTC...CAGACCGCATTTCCTGCTGCTCCCATGCCGCATGCCAGGTGGCCTGAGACAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp CCTCCCGCCACATCAACTCTGTGCTCCTCCTCTACCGTGCCAGGGACACTCCCAGAGATTGGTTTCTGGTaGGGGCTCTCTTCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: PPATSTLCSSSTVPGTLPEIGFW*GLSSWL
Trigger: AAGCCAAGAAGAGAGCCCTCACCAGAAACCAATCTC...TGGGAGTGTCCCTGGCACGGTAGAGGAGGAGCACAGAGTTGATGTGGCGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR GCA 90 bp TGTCCAACCTGGGAGGGTGGAATTTCGGCTCACCTGGAGAGGATGCCTGATGACGAGTGGGCGTCAGCTTaGTCTTGGCCTCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: CPTWEGGISAHLERMPDDEWASA*SWPLSP
Trigger: AGGAGACAGAGGCCAAGAGCAAGCTGACGCCCACTC...GTCATCAGGCATCCTCTCCAGGTGAGCCGAAATTCCACCCTCCCAGGTTGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp CCCAGTTCCCAGAGGATCACAAGGCCAAGGATCCAATGGGCACACCATGAGGACTGCTGCTGCTGCTGCTaGAGGAGCTGGATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PSSQRITRPRIQWAHHEDCCCCC*RSWIFS
Trigger: GGAGAAGATCCAGCTCCTGCAGCAGCAGCAGCAGCA...GTCCTCATGGTGTGCCCATTGGATCCTTGGCCTTGTGATCCTCTGGGAACTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp CACAAAAGTCAGCGACCAGAGACCATGAGGGACATGGGCCGCAGAGCACTGCTTGCCGGTCCTTCTCCGTaGAGAAGTAGCGGATCACGT +
Preference number: 4 (lower is better)
Translates to: HKSQRPETMRDMGRRALLAGPSP*RSSGSR
Trigger: ACGTGATCCGCTACTTCTGCACGGAGAAGGACCGGC...AAGCAGTGCTCTGCGGCCCATGTCCCTCATGGTCTCTGGTCGCTGACTTTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR GCA 90 bp GCACCTTCTCCACCTTCTGATCCTCTCTTGGGTTACTGCCAAAGCCCACAGGTACCCGAGGTGGTCTGCTaGAGCAAGGTGATGGGCTCC +
Preference number: 4 (lower is better)
Translates to: APSPPSDPLLGYCQSPQVPEVVC*SKVMGS
Trigger: GGAGCCCATCACCTTGCTGCAGCAGACCACCTCGGG...TACCTGTGGGCTTTGGCAGTAACCCAAGAGAGGATCAGAAGGTGGAGAAGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp GCACCTTCTCCACCTTCTGATCCTCTCTTGGGTTACTGCCAAAGCCCACAGGTAAGGCCCGAGGTGGTCTaGTGCAGCAAGGTGATGGGC +
Preference number: 4 (lower is better)
Translates to: APSPPSDPLLGYCQSPQVRPEVV*CSKVMG
Trigger: GCCCATCACCTTGCTGCAGCAGACCACCTCGGGCCT...TACCTGTGGGCTTTGGCAGTAACCCAAGAGAGGATCAGAAGGTGGAGAAGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp CTCTGTCTCAGGCCACCTGGCATGCGGCATGGGAGCAGCAGGAAATGCGGTCTGTGCCAAAAGGGTGGCTaGCCTCAGAGATTACGTAGT +
Preference number: 4 (lower is better)
Translates to: LCLRPPGMRHGSSRKCGLCQKGG*PQRLRS
Trigger: ACTACGTAATCTCTGAGGGCAGCCACCCTTTTGGCA...CAGACCGCATTTCCTGCTGCTCCCATGCCGCATGCCAGGTGGCCTGAGACAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp TTTGCAGACATCATGACCGTAAGGCTTTTGGGGCCAGCATCTTCCCAGTTCCCTCGTCTCCCGCACCTCTaGAGGCAGCTCCCGGTAGTG +
Preference number: 4 (lower is better)
Translates to: FADIMTVRLLGPASSQFPRLPHL*RQLPVV
Trigger: CACTACCGGGAGCTGCCTGCAGAGGTGCGGGAGACG...AGGGAACTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp TGCAAAGCCGGGAGGCATCAAGCTCTAATTGTGGTGACCAGGCCCTCAGTCACACTGTCCTCTGTGGGCTaGAGAGCAGGCAGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: CKAGRHQALIVVTRPSVTLSSVG*RAGSSR
Trigger: CCTTGAGCTGCCTGCTCTGCAGCCCACAGAGGACAG...TGTGACTGAGGGCCTGGTCACCACAATTAGAGCTTGATGCCTCCCGGCTTTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp AGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCAACGCCCCACCTGCCAGCATaGATAGCTGACCAGTCCCTA +
Preference number: 4 (lower is better)
Translates to: RLLQWEAHCSHVLCGFPTPHLPA*IADQSL
Trigger: TAGGGACTGGTCAGCTATGCATGCTGGCAGGTGGGG...CGTTGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp CTCTGTCTCAGGCCACCTGGCATGCGGCATGGGAGCAGCAGGAAATGCGGTCTGTTCATTTCTGAGACCTaGAGACACAACCCCACCTGC +
Preference number: 4 (lower is better)
Translates to: LCLRPPGMRHGSSRKCGLFISET*RHNPTC
Trigger: GCAGGTGGGGTTGTGTCTGCAGGTCTCAGAAATGAA...CAGACCGCATTTCCTGCTGCTCCCATGCCGCATGCCAGGTGGCCTGAGACAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp CCAGCATCTTCCCAGTTCCCTGTAGGTCACGAGGGGCCACTTCTCCCACTTCCTCTCACCTGGAGAGGATaGCTGATGACTTCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: PASSQFPVGHEGPLLPLPLTWRG*LMTSCQ
Trigger: CTGGCAGGAAGTCATCAGGCATCCTCTCCAGGTGAG...AGGAAGTGGGAGAAGTGGCCCCTCGTGACCTACAGGGAACTGGGAAGATGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp AGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCAACGGCGACTTTTGCAACCTaGCCTCTCACACGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: RLLQWEAHCSHVLCGFPTATFAT*PLTRCS
Trigger: GCTGCAGCGTGTGAGAGGGCAGGTTGCAAAAGTCGC...CGTTGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR CCA 90 bp CCCAGTTCCCAGAGGATCACAAGGCCAAGGATCCAATGGGCACACCATGAGGACGCGTCAGCTTGCTCTTaGCCTCTGTCTCCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: PSSQRITRPRIQWAHHEDASACS*PLSPWG
Trigger: TCCCCAAGGAGACAGAGGCCAAGAGCAAGCTGACGC...GTCCTCATGGTGTGCCCATTGGATCCTTGGCCTTGTGATCCTCTGGGAACTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp GCACCTTCTCCACCTTCTGATCCTCTCTTGGGTTACTGCCAAAGCCCACAGGTAACGTGCTGGGGCTGCTaGTGCCCGAGCTCTCTGAGT +
Preference number: 4 (lower is better)
Translates to: APSPPSDPLLGYCQSPQVTCWGC*CPSSLS
Trigger: ACTCAGAGAGCTCGGGCACCAGCAGCCCCAGCACGT...TACCTGTGGGCTTTGGCAGTAACCCAAGAGAGGATCAGAAGGTGGAGAAGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp ATCACCTGGGTACTCCCAAAGAGAAAACCTGTGCTGAGAACGAGCTGGGCTGGGGTGCCCTCAGCTCCATaGCCCAGGACATCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: ITWVLPKRKPVLRTSWAGVPSAP*PRTSLG
Trigger: TCCCAAGGATGTCCTGGGCCATGGAGCTGAGGGCAC...CCCAGCCCAGCTCGTTCTCAGCACAGGTTTTCTCTTTGGGAGTACCCAGGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp CCCTCCTTTGCAGACATCATGACCGTAAGGCTTTTGGGGCCAGCATCTTCCCAGGTGCCCTCAGCTCCATaGCCCAGGACATCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: PSFADIMTVRLLGPASSQVPSAP*PRTSLG
Trigger: TCCCAAGGATGTCCTGGGCCATGGAGCTGAGGGCAC...CTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAAGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp CTCTGTCTCAGGCCACCTGGCATGCGGCATGGGAGCAGCAGGAAATGCGGTCTGCTGCACACAGCTCGATaGCAATGTACTGGAATTGCC +
Preference number: 4 (lower is better)
Translates to: LCLRPPGMRHGSSRKCGLLHTAR*QCTGIA
Trigger: GGCAATTCCAGTACATTGCCATCGAGCTGTGTGCAG...CAGACCGCATTTCCTGCTGCTCCCATGCCGCATGCCAGGTGGCCTGAGACAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp CCAGCATCTTCCCAGTTCCCTGTAGGTCACGAGGGGCCACTTCTCCCACTTCCTCTGTCGCTCACGTCCTaGAAGAACTGGAGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: PASSQFPVGHEGPLLPLPLSLTS*KNWSCF
Trigger: GAAGCAGCTCCAGTTCTTCCAGGACGTGAGCGACAG...AGGAAGTGGGAGAAGTGGCCCCTCGTGACCTACAGGGAACTGGGAAGATGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp GCACCTTCTCCACCTTCTGATCCTCTCTTGGGTTACTGCCAAAGCCCACAGGTAGGCTGCACAGCTCCATaGCCCGGTAGGTGTGTGCGA +
Preference number: 4 (lower is better)
Translates to: APSPPSDPLLGYCQSPQVGCTAP*PGRCVR
Trigger: TCGCACACACCTACCGGGCCATGGAGCTGTGCAGCC...TACCTGTGGGCTTTGGCAGTAACCCAAGAGAGGATCAGAAGGTGGAGAAGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp GACAGAGAAAGGAACGGCTCTGGGAAAGCCAAACCTGGCCAAAGTCCAACTTCCCTGTCTCAGGCCACCTaGCATGCGGCATGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: DRERNGSGKAKPGQSPTSLSQAT*HAAWEQ
Trigger: CTGCTCCCATGCCGCATGCCAGGTGGCCTGAGACAG...GGAAGTTGGACTTTGGCCAGGTTTGGCTTTCCCAGAGCCGTTCCTTTCTCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp TGTGAACAGATGCCAGGCAGTAGTTACCAATCCAAGGTGAGGTGCTCAAGTTCACGAGCCTCCCACGGCTaGGCTCACGGGGCATCTGGC +
Preference number: 4 (lower is better)
Translates to: CEQMPGSSYQSKVRCSSSRASHG*AHGASG
Trigger: GCCAGATGCCCCGTGAGCCCAGCCGTGGGAGGCTCG...TGAACTTGAGCACCTCACCTTGGATTGGTAACTACTGCCTGGCATCTGTTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR CAA 72 bp ATGCGGTCTGGCCACGTTTCTGAACAACGCACAGCCTaGCTTAGAAGACGCCAAGGACACCGACCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: MRSGHVSEQRTA*LRRRQGHRPRA
Trigger: GGCCCTTGGTCGGTGTCCTTGGCGTCTTCTAAGCAAGGCTGTGCGTTGTTCAGAAACGTGGCCAGACCGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp CTTTCACCTGAAAAACGGAGTCCAAATCTGGGGCAGGCAAATAATGAAACCCTCACGACAGCGAGGCGGTaGCCGAGCCTCAGCGGACGC +
Preference number: 4 (lower is better)
Translates to: LSPEKRSPNLGQANNETLTTARR*PSLSGR
Trigger: GCGTCCGCTGAGGCTCGGTCACCGCCTCGCTGTCGT...GAGGGTTTCATTATTTGCCTGCCCCAGATTTGGACTCCGTTTTTCAGGTGAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR TCA 90 bp AGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCAACGGTCGTCCTCAGGCAGTaGGGCCGCATAGTCAAAGTA +
Preference number: 4 (lower is better)
Translates to: RLLQWEAHCSHVLCGFPTVVLRQ*GRIVKV
Trigger: TACTTTGACTATGCGGCCTCACTGCCTGAGGACGAC...CGTTGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp GCACCTTCTCCACCTTCTGATCCTCTCTTGGGTTACTGCCAAAGCCCACAGGTACCACCTCCCCAGACATaGAGGTCAGATAGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: APSPPSDPLLGYCQSPQVPPPQT*RSDSAG
Trigger: CCCTGCGCTATCTGACCTTCATGTCTGGGGAGGTGG...TACCTGTGGGCTTTGGCAGTAACCCAAGAGAGGATCAGAAGGTGGAGAAGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp AGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCAACGCGGAGATCATGGCCTTaGTCTTGCCGTGTGCATTGG +
Preference number: 4 (lower is better)
Translates to: RLLQWEAHCSHVLCGFPTRRSWP*SCRVHW
Trigger: CCAATGCACACGGCAAGATCAAGGCCATGATCTCCG...CGTTGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp CCCAGTTCCCAGAGGATCACAAGGCCAAGGATCCAATGGGCACACCATGAGGACCGGAGATCATGGCCTTaGTCTTGCCGTGTGCATTGG +
Preference number: 4 (lower is better)
Translates to: PSSQRITRPRIQWAHHEDRRSWP*SCRVHW
Trigger: CCAATGCACACGGCAAGATCAAGGCCATGATCTCCG...GTCCTCATGGTGTGCCCATTGGATCCTTGGCCTTGTGATCCTCTGGGAACTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp CCCAGTTCCCAGAGGATCACAAGGCCAAGGATCCAATGGGCACACCATGAGGACCCTCCTCTCCCTTCCTaGAAGGCCTGTAGACTGACA +
Preference number: 4 (lower is better)
Translates to: PSSQRITRPRIQWAHHEDPPLPS*KACRLT
Trigger: TGTCAGTCTACAGGCCTTTCAGGAAGGGAGAGGAGG...GTCCTCATGGTGTGCCCATTGGATCCTTGGCCTTGTGATCCTCTGGGAACTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp CCCTCCTTTGCAGACATCATGACCGTAAGGCTTTTGGGGCCAGCATCTTCCCAGAGGAAAGACCAGAGGTaGCCGGACCAGATCCCTGTG +
Preference number: 4 (lower is better)
Translates to: PSFADIMTVRLLGPASSQRKDQR*PDQIPV
Trigger: CACAGGGATCTGGTCCGGTCACCTCTGGTCTTTCCT...CTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAAGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp GCACCTTCTCCACCTTCTGATCCTCTCTTGGGTTACTGCCAAAGCCCACAGGTATCACACGCTGCAGCATaGTCACCTGTCTGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: APSPPSDPLLGYCQSPQVSHAAA*SPVWRG
Trigger: CCCCCTCCAGACAGGTGATCATGCTGCAGCGTGTGA...TACCTGTGGGCTTTGGCAGTAACCCAAGAGAGGATCAGAAGGTGGAGAAGGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR GCA 90 bp ATCACCTGGGTACTCCCAAAGAGAAAACCTGTGCTGAGAACGAGCTGGGCTGGGTGCTGCTGCTGCTGCTaGAGGAGCTGGATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: ITWVLPKRKPVLRTSWAGCCCCC*RSWIFS
Trigger: GGAGAAGATCCAGCTCCTGCAGCAGCAGCAGCAGCA...CCCAGCCCAGCTCGTTCTCAGCACAGGTTTTCTCTTTGGGAGTACCCAGGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp CCCTCCTTTGCAGACATCATGACCGTAAGGCTTTTGGGGCCAGCATCTTCCCAGGCCGGTCCTTCTCCGTaGAGAAGTAGCGGATCACGT +
Preference number: 4 (lower is better)
Translates to: PSFADIMTVRLLGPASSQAGPSP*RSSGSR
Trigger: ACGTGATCCGCTACTTCTGCACGGAGAAGGACCGGC...CTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAAGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp TTTGCAGACATCATGACCGTAAGGCTTTTGGGGCCAGCATCTTCCCAGTTCCCTAGGCCCGAGGTGGTCTaGTGCAGCAAGGTGATGGGC +
Preference number: 4 (lower is better)
Translates to: FADIMTVRLLGPASSQFPRPEVV*CSKVMG
Trigger: GCCCATCACCTTGCTGCAGCAGACCACCTCGGGCCT...AGGGAACTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp GCTACTCGCGCTGTCTCTGAGGCCCTCCTTTGCAGACATCATGACCGTAAGGCTCCACTGCCAGCTTCTTaGAGAGGCCAAAGTCGGAGA +
Preference number: 4 (lower is better)
Translates to: ATRAVSEALLCRHHDRKAPLPAS*RGQSRR
Trigger: TCTCCGACTTTGGCCTCTGCAAGAAGCTGGCAGTGG...AGCCTTACGGTCATGATGTCTGCAAAGGAGGGCCTCAGAGACAGCGCGAGTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp TGCAAAGCCGGGAGGCATCAAGCTCTAATTGTGGTGACCAGGCCCTCAGTCACAATGTTGGCCTGCCGCTaGAGGGACTTGCCAAAAGGG +
Preference number: 4 (lower is better)
Translates to: CKAGRHQALIVVTRPSVTMLACR*RDLPKG
Trigger: CCCTTTTGGCAAGTCCCTGCAGCGGCAGGCCAACAT...TGTGACTGAGGGCCTGGTCACCACAATTAGAGCTTGATGCCTCCCGGCTTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp TGTCCAACCTGGGAGGGTGGAATTTCGGCTCACCTGGAGAGGATGCCTGATGACTCGTGCTTCTCTGGGTaGAAGCAGTCAAGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: CPTWEGGISAHLERMPDDSCFSG*KQSRLQ
Trigger: CTGCAGCCTTGACTGCTTGCACCCAGAGAAGCACGA...GTCATCAGGCATCCTCTCCAGGTGAGCCGAAATTCCACCCTCCCAGGTTGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp CACAAAAGTCAGCGACCAGAGACCATGAGGGACATGGGCCGCAGAGCACTGCTTGGGTGTTTGAGCACATaGTTCGCTGAGGGGCGTTTC +
Preference number: 4 (lower is better)
Translates to: HKSQRPETMRDMGRRALLGCLST*FAEGRF
Trigger: GAAACGCCCCTCAGCGAAGCATGTGCTCAAACACCC...AAGCAGTGCTCTGCGGCCCATGTCCCTCATGGTCTCTGGTCGCTGACTTTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR GCA 90 bp AGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCAACGGGGAGTGAGAACACCTaGGCACCCAGGATTTCACAC +
Preference number: 4 (lower is better)
Translates to: RLLQWEAHCSHVLCGFPTGSENT*APRISH
Trigger: GTGTGAAATCCTGGGTGCGCAGGTGTTCTCACTCCC...CGTTGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp TGTCCAACCTGGGAGGGTGGAATTTCGGCTCACCTGGAGAGGATGCCTGATGACCTCACCTGGAGAGGATaGCTGATGACTTCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: CPTWEGGISAHLERMPDDLTWRG*LMTSCQ
Trigger: CTGGCAGGAAGTCATCAGGCATCCTCTCCAGGTGAG...GTCATCAGGCATCCTCTCCAGGTGAGCCGAAATTCCACCCTCCCAGGTTGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp CCCAGTTCCCAGAGGATCACAAGGCCAAGGATCCAATGGGCACACCATGAGGACCAGTGGGAGGCTCACTaGAGTCACGTTCTTTGTGGC +
Preference number: 4 (lower is better)
Translates to: PSSQRITRPRIQWAHHEDQWEAH*SHVLCG
Trigger: GCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTG...GTCCTCATGGTGTGCCCATTGGATCCTTGGCCTTGTGATCCTCTGGGAACTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp AGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCAACGTGCCCTCTCACACGCTaGAGCATGATCACCTGTCTG +
Preference number: 4 (lower is better)
Translates to: RLLQWEAHCSHVLCGFPTCPLTR*SMITCL
Trigger: CAGACAGGTGATCATGCTGCAGCGTGTGAGAGGGCA...CGTTGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR GCA 90 bp GCACCTTCTCCACCTTCTGATCCTCTCTTGGGTTACTGCCAAAGCCCACAGGTATCCCGGAGCTTCACCTaGACCTACGTCCCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: APSPPSDPLLGYCQSPQVSRSFT*TYVPEG
Trigger: CCCTTCAGGGACGTAGGTGCAGGTGAAGCTCCGGGA...TACCTGTGGGCTTTGGCAGTAACCCAAGAGAGGATCAGAAGGTGGAGAAGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR GCA 90 bp CCTCCCGCCACATCAACTCTGTGCTCCTCCTCTACCGTGCCAGGGACACTCCCAAGCTGGTCTTTGGGCTaGTTAAAGTTCCTGCTGATC +
Preference number: 4 (lower is better)
Translates to: PPATSTLCSSSTVPGTLPSWSLG*LKFLLI
Trigger: GATCAGCAGGAACTTTAAGCAGCCCAAAGACCAGCT...TGGGAGTGTCCCTGGCACGGTAGAGGAGGAGCACAGAGTTGATGTGGCGGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR GCA 90 bp CCTCCCGCCACATCAACTCTGTGCTCCTCCTCTACCGTGCCAGGGACACTCCCAATGGGACTGTCTAGTTaGAGGAAAAGAAGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: PPATSTLCSSSTVPGTLPMGLSS*RKRSSG
Trigger: CCCTGAGCTTCTTTTCCTGCAACTAGACAGTCCCAT...TGGGAGTGTCCCTGGCACGGTAGAGGAGGAGCACAGAGTTGATGTGGCGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR GCA 90 bp CCTCCCGCCACATCAACTCTGTGCTCCTCCTCTACCGTGCCAGGGACACTCCCAATTCTATTTCTGGCTTaGCTCTCACCCTTCCCATCC +
Preference number: 4 (lower is better)
Translates to: PPATSTLCSSSTVPGTLPILFLA*LSPFPS
Trigger: GGATGGGAAGGGTGAGAGGCAAGCCAGAAATAGAAT...TGGGAGTGTCCCTGGCACGGTAGAGGAGGAGCACAGAGTTGATGTGGCGGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR CCA 90 bp TTTGCAGACATCATGACCGTAAGGCTTTTGGGGCCAGCATCTTCCCAGTTCCCTGTGTCTCCAGGTGGGTaGAAGGGCAGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: FADIMTVRLLGPASSQFPVSPGG*KGSCCC
Trigger: GCAGCAGCAGCTGCCCTTCCACCCACCTGGAGACAC...AGGGAACTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp TCTAGAGTTGGTGGGAAGAAACTCTGCTGGATCTACTCACCTGCAGATCTTCCAGGCTGCTGCCAGCCTTaGAGGCAGAGCTGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: SRVGGKKLCWIYSPADLPGCCQP*RQSCRS
Trigger: GCTCCGGCAGCTCTGCCTCCAAGGCTGGCAGCAGCC...TGGAAGATCTGCAGGTGAGTAGATCCAGCAGAGTTTCTTCCCACCAACTCTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp CCAGCATCTTCCCAGTTCCCTGTAGGTCACGAGGGGCCACTTCTCCCACTTCCTGACTTGCCAAAAGGGTaGCTGCCCTCAGAGATTACG +
Preference number: 4 (lower is better)
Translates to: PASSQFPVGHEGPLLPLPDLPKG*LPSEIT
Trigger: CGTAATCTCTGAGGGCAGCCACCCTTTTGGCAAGTC...AGGAAGTGGGAGAAGTGGCCCCTCGTGACCTACAGGGAACTGGGAAGATGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp CCCAGTTCCCAGAGGATCACAAGGCCAAGGATCCAATGGGCACACCATGAGGACTATCCAGTAGATGGCTaGGGGTGCTACTCGCGCTGT +
Preference number: 4 (lower is better)
Translates to: PSSQRITRPRIQWAHHEDYPVDG*GCYSRC
Trigger: ACAGCGCGAGTAGCACCCCCAGCCATCTACTGGATA...GTCCTCATGGTGTGCCCATTGGATCCTTGGCCTTGTGATCCTCTGGGAACTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp GACAGAGAAAGGAACGGCTCTGGGAAAGCCAAACCTGGCCAAAGTCCAACTTCCTCTGGTCCTGAAGGCTaGCCCCTGTCTGGGTCTTCG +
Preference number: 4 (lower is better)
Translates to: DRERNGSGKAKPGQSPTSSGPEG*PLSGSS
Trigger: CGAAGACCCAGACAGGGGCCAGCCTTCAGGACCAGA...GGAAGTTGGACTTTGGCCAGGTTTGGCTTTCCCAGAGCCGTTCCTTTCTCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp TTTGCAGACATCATGACCGTAAGGCTTTTGGGGCCAGCATCTTCCCAGTTCCCTCTGTCTCAGGCCACCTaGCATGCGGCATGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: FADIMTVRLLGPASSQFPLSQAT*HAAWEQ
Trigger: CTGCTCCCATGCCGCATGCCAGGTGGCCTGAGACAG...AGGGAACTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp CCAGCATCTTCCCAGTTCCCTGTAGGTCACGAGGGGCCACTTCTCCCACTTCCTCCATCCTGCCTAACATaGGGAAACCCCGTCTCTACT +
Preference number: 4 (lower is better)
Translates to: PASSQFPVGHEGPLLPLPPSCLT*GNPVST
Trigger: AGTAGAGACGGGGTTTCCCCATGTTAGGCAGGATGG...AGGAAGTGGGAGAAGTGGCCCCTCGTGACCTACAGGGAACTGGGAAGATGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp TGTCCAACCTGGGAGGGTGGAATTTCGGCTCACCTGGAGAGGATGCCTGATGACAGGCCAAGGATCCAATaGGCACACCATGAGGACCCA +
Preference number: 4 (lower is better)
Translates to: CPTWEGGISAHLERMPDDRPRIQ*AHHEDP
Trigger: TGGGTCCTCATGGTGTGCCCATTGGATCCTTGGCCT...GTCATCAGGCATCCTCTCCAGGTGAGCCGAAATTCCACCCTCCCAGGTTGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp AGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCAACGCTGCAAAAGTGGAACTaGCCCCCAGTTCCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: RLLQWEAHCSHVLCGFPTLQKWN*PPVPRG
Trigger: TCCTCTGGGAACTGGGGGCCAGTTCCACTTTTGCAG...CGTTGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp TGTCCAACCTGGGAGGGTGGAATTTCGGCTCACCTGGAGAGGATGCCTGATGACTTAAGGCTGCTCCAGTaGGAGGCTCACTGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: CPTWEGGISAHLERMPDDLRLLQ*EAHCSH
Trigger: GTGACTGCAGTGAGCCTCCCACTGGAGCAGCCTTAA...GTCATCAGGCATCCTCTCCAGGTGAGCCGAAATTCCACCCTCCCAGGTTGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp ATCACCTGGGTACTCCCAAAGAGAAAACCTGTGCTGAGAACGAGCTGGGCTGGGCATCCAACCCAAGGGTaGTATCCCCCTGAACCCCAC +
Preference number: 4 (lower is better)
Translates to: ITWVLPKRKPVLRTSWAGHPTQG*YPPEPH
Trigger: GTGGGGTTCAGGGGGATACCACCCTTGGGTTGGATG...CCCAGCCCAGCTCGTTCTCAGCACAGGTTTTCTCTTTGGGAGTACCCAGGTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR CCA 90 bp CCTCCCGCCACATCAACTCTGTGCTCCTCCTCTACCGTGCCAGGGACACTCCCACTGCCTTTTTCATTTTaGGGTCCTACAGAACAGGGG +
Preference number: 4 (lower is better)
Translates to: PPATSTLCSSSTVPGTLPLPFSF*GPTEQG
Trigger: CCCCTGTTCTGTAGGACCCCAAAATGAAAAAGGCAG...TGGGAGTGTCCCTGGCACGGTAGAGGAGGAGCACAGAGTTGATGTGGCGGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR TCA 90 bp TTAAGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCACTCTGTGAACGATGTTaGGGGAGTGGAGGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: LRLLQWEAHCSHVLCGFPLCERC*GSGGGP
Trigger: TGGCCCACCTCCACTCCCTCAACATCGTTCACAGAG...TGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp TCTGTGATCAATGAGAAATCTCACACTGCAGGACGACACCCTCTGAACTCCGTCCCCCAGATCGGCGGCTaGAACTGTGTCTGCCCACTG +
Preference number: 4 (lower is better)
Translates to: SVINEKSHTAGRHPLNSVPQIGG*NCVCPL
Trigger: CAGTGGGCAGACACAGTTTCAGCCGCCGATCTGGGG...GACGGAGTTCAGAGGGTGTCGTCCTGCAGTGTGAGATTTCTCATTGATCACAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp TTAAGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCAGAGCACATGCTTCGCTaGGGGGCGTTTCTGAGGATC +
Preference number: 4 (lower is better)
Translates to: LRLLQWEAHCSHVLCGFPEHMLR*GAFLRI
Trigger: GATCCTCAGAAACGCCCCTCAGCGAAGCATGTGCTC...TGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp AAGACTCAAGAAGCAACAAGAGAAATTCTGGCACACGTGCCCAAGAGAGGTTTATGCCCCAGGCGCTCCTaGGCACCACCCCGAGATGGC +
Preference number: 4 (lower is better)
Translates to: KTQEATREILAHVPKRGLCPRRS*APPRDG
Trigger: GCCATCTCGGGGTGGTGCTCAGGAGCGCCTGGGGCA...TAAACCTCTCTTGGGCACGTGTGCCAGAATTTCTCTTGTTGCTTCTTGAGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp CCCTCCTTTGCAGACATCATGACCGTAAGGCTTTTGGGGCCAGCATCTTCCCAGCCAATGGGCACACCATaGGGACCCAAGGAAAGGACA +
Preference number: 4 (lower is better)
Translates to: PSFADIMTVRLLGPASSQPMGTP*GPKERT
Trigger: TGTCCTTTCCTTGGGTCCTCATGGTGTGCCCATTGG...CTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAAGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp ATCACCTGGGTACTCCCAAAGAGAAAACCTGTGCTGAGAACGAGCTGGGCTGGGCTGAACCCCACCTGGTaGTCACACCCAGGTCAGAAA +
Preference number: 4 (lower is better)
Translates to: ITWVLPKRKPVLRTSWAGLNPTW*SHPGQK
Trigger: TTTCTGACCTGGGTGTGATCACCAGGTGGGGTTCAG...CCCAGCCCAGCTCGTTCTCAGCACAGGTTTTCTCTTTGGGAGTACCCAGGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR TCA 90 bp CCTCCCGCCACATCAACTCTGTGCTCCTCCTCTACCGTGCCAGGGACACTCCCAGCTATAAACGTCCTTTaGGCAGAATGCCTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: PPATSTLCSSSTVPGTLPAINVL*AECLFL
Trigger: GAGGAAAAGGCATTCTGCTCAAAGGACGTTTATAGC...TGGGAGTGTCCCTGGCACGGTAGAGGAGGAGCACAGAGTTGATGTGGCGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR TCA 90 bp CCTCCCGCCACATCAACTCTGTGCTCCTCCTCTACCGTGCCAGGGACACTCCCATCCCCAGGGAATGCTTaGGAAATCGATGAAGGTATT +
Preference number: 4 (lower is better)
Translates to: PPATSTLCSSSTVPGTLPSPGNA*EIDEGI
Trigger: AATACCTTCATCGATTTCTCAAGCATTCCCTGGGGA...TGGGAGTGTCCCTGGCACGGTAGAGGAGGAGCACAGAGTTGATGTGGCGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR GCA 90 bp CCCAGTTCCCAGAGGATCACAAGGCCAAGGATCCAATGGGCACACCATGAGGACACTTCGGCATGGGGATaGCTGCACCAATTCTGGGAT +
Preference number: 4 (lower is better)
Translates to: PSSQRITRPRIQWAHHEDTSAWG*LHQFWD
Trigger: ATCCCAGAATTGGTGCAGGCATCCCCATGCCGAAGT...GTCCTCATGGTGTGCCCATTGGATCCTTGGCCTTGTGATCCTCTGGGAACTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp TGTCCAACCTGGGAGGGTGGAATTTCGGCTCACCTGGAGAGGATGCCTGATGACGATGACAAAGTCTGCTaGTTCTCTCCGGTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: CPTWEGGISAHLERMPDDDDKVC*FSPVRR
Trigger: CCTCCTGACCGGAGAGAAGCAGCAGACTTTGTCATC...GTCATCAGGCATCCTCTCCAGGTGAGCCGAAATTCCACCCTCCCAGGTTGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp CCCAGTTCCCAGAGGATCACAAGGCCAAGGATCCAATGGGCACACCATGAGGACGATGACAAAGTCTGCTaGTTCTCTCCGGTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: PSSQRITRPRIQWAHHEDDDKVC*FSPVRR
Trigger: CCTCCTGACCGGAGAGAAGCAGCAGACTTTGTCATC...GTCCTCATGGTGTGCCCATTGGATCCTTGGCCTTGTGATCCTCTGGGAACTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp GGGAAACCAGAATTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTGTTCCAGGGAGGGGCTaGTGCCAGCCTTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GKPEFSRLELDTPDDAQGVPGRG*CQPWRQ
Trigger: CTGCCTCCAAGGCTGGCAGCAGCCCCTCCCTGGAAC...ACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAATTCTGGTTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp TGCAAAGCCGGGAGGCATCAAGCTCTAATTGTGGTGACCAGGCCCTCAGTCACACTCTTGCAGGGTGGCTaGACACAGCTCGATGGCAAT +
Preference number: 4 (lower is better)
Translates to: CKAGRHQALIVVTRPSVTLLQGG*TQLDGN
Trigger: ATTGCCATCGAGCTGTGTGCAGCCACCCTGCAAGAG...TGTGACTGAGGGCCTGGTCACCACAATTAGAGCTTGATGCCTCCCGGCTTTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp CCCTCCTTTGCAGACATCATGACCGTAAGGCTTTTGGGGCCAGCATCTTCCCAGGGGTGTTTGAGCACATaGTTCGCTGAGGGGCGTTTC +
Preference number: 4 (lower is better)
Translates to: PSFADIMTVRLLGPASSQGCLST*FAEGRF
Trigger: GAAACGCCCCTCAGCGAAGCATGTGCTCAAACACCC...CTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAAGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp TTAAGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCAACGAAGGAGTTTGACTaGCTACTCGCTGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LRLLQWEAHCSHVLCGFPTKEFD*LLAGPG
Trigger: CCCTGGGCCAGCGAGTAGGCAGTCAAACTCCTTCGT...TGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp TTTGCAGACATCATGACCGTAAGGCTTTTGGGGCCAGCATCTTCCCAGTTCCCTGCCTCTGACCACCACTaGACTGAGAACACGGCGGGA +
Preference number: 4 (lower is better)
Translates to: FADIMTVRLLGPASSQFPASDHH*TENTAG
Trigger: TCCCGCCGTGTTCTCAGTGCAGTGGTGGTCAGAGGC...AGGGAACTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp CCAGCATCTTCCCAGTTCCCTGTAGGTCACGAGGGGCCACTTCTCCCACTTCCTGCCATCATTAGGATCTaGGAGAAAGGCAGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: PASSQFPVGHEGPLLPLPAIIRI*EKGRLF
Trigger: GAAGAGCCTGCCTTTCTCCCAGATCCTAATGATGGC...AGGAAGTGGGAGAAGTGGCCCCTCGTGACCTACAGGGAACTGGGAAGATGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp CCCTCCTTTGCAGACATCATGACCGTAAGGCTTTTGGGGCCAGCATCTTCCCAGTGGCCTCTGTCTCCTTaGGGAACGGGTACTTCCACT +
Preference number: 4 (lower is better)
Translates to: PSFADIMTVRLLGPASSQWPLSP*GTGTST
Trigger: AGTGGAAGTACCCGTTCCCCAAGGAGACAGAGGCCA...CTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAAGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp AGCTCGGGAAATGTTGGCAAAACACCCTTTCATCATGCAAGGAAGAGACAGAATGGCCGGGCAGGGGCATaGGCGGGCTTCTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: SSGNVGKTPFHHARKRQNGRAGA*AGFSST
Trigger: TGTGGAGGAGAAGCCCGCCCATGCCCCTGCCCGGCC...ATTCTGTCTCTTCCTTGCATGATGAAAGGGTGTTTTGCCAACATTTCCCGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR CCA 90 bp TGTCCAACCTGGGAGGGTGGAATTTCGGCTCACCTGGAGAGGATGCCTGATGACTTCTCCAGTTCCTTCTaGAACTGCTGGTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: CPTWEGGISAHLERMPDDFSSSF*NCWCWS
Trigger: GCTCCAGCACCAGCAGTTCCAGAAGGAACTGGAGAA...GTCATCAGGCATCCTCTCCAGGTGAGCCGAAATTCCACCCTCCCAGGTTGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp CCCAGTTCCCAGAGGATCACAAGGCCAAGGATCCAATGGGCACACCATGAGGACTTCGCTCAGCATCTCTaGAGCGATCCAGCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: PSSQRITRPRIQWAHHEDFAQHL*SDPAFC
Trigger: ACAGAAGGCTGGATCGCTCCAGAGATGCTGAGCGAA...GTCCTCATGGTGTGCCCATTGGATCCTTGGCCTTGTGATCCTCTGGGAACTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp CTACAGACCAAACAGCTAAGCCGCAACACGATATGTGATGGTGCAGAGCTGTTCCACCCAGGAGGATGTTaGCCTGCCGCTGCAGGGACT +
Preference number: 4 (lower is better)
Translates to: LQTKQLSRNTICDGAELFHPGGC*PAAAGT
Trigger: AGTCCCTGCAGCGGCAGGCCAACATCCTCCTGGGTG...GAACAGCTCTGCACCATCACATATCGTGTTGCGGCTTAGCTGTTTGGTCTGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp AGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCAACGACGTCCTGGAAGAACTaGAGCTGCTTCTCTAGGCTC +
Preference number: 4 (lower is better)
Translates to: RLLQWEAHCSHVLCGFPTTSWKN*SCFSRL
Trigger: GAGCCTAGAGAAGCAGCTCCAGTTCTTCCAGGACGT...CGTTGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp GCCGCAACACGATATGTGATGGTGCAGAGCTGTTCTGGCCTGAAAAGAACTTTCGGCTGCACAGCTCCATaGCCCGGTAGGTGTGTGCGA +
Preference number: 4 (lower is better)
Translates to: AATRYVMVQSCSGLKRTFGCTAP*PGRCVR
Trigger: TCGCACACACCTACCGGGCCATGGAGCTGTGCAGCC...GAAAGTTCTTTTCAGGCCAGAACAGCTCTGCACCATCACATATCGTGTTGCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp CCCTCCTTTGCAGACATCATGACCGTAAGGCTTTTGGGGCCAGCATCTTCCCAGTCAAGGCACTTGGTTTaGGAAGCCTGGTCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: PSFADIMTVRLLGPASSQSRHLV*EAWSPC
Trigger: GCAGGGAGACCAGGCTTCCCAAACCAAGTGCCTTGA...CTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAAGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp TGCAAAGCCGGGAGGCATCAAGCTCTAATTGTGGTGACCAGGCCCTCAGTCACATATCCAGTAGATGGCTaGGGGTGCTACTCGCGCTGT +
Preference number: 4 (lower is better)
Translates to: CKAGRHQALIVVTRPSVTYPVDG*GCYSRC
Trigger: ACAGCGCGAGTAGCACCCCCAGCCATCTACTGGATA...TGTGACTGAGGGCCTGGTCACCACAATTAGAGCTTGATGCCTCCCGGCTTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp GCACCTTCTCCACCTTCTGATCCTCTCTTGGGTTACTGCCAAAGCCCACAGGTACACACCTCATGCTCATaGCTCCTGCTGCCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: APSPPSDPLLGYCQSPQVHTSCS*LLLPLQ
Trigger: CTGCAGAGGCAGCAGGAGCCATGAGCATGAGGTGTG...TACCTGTGGGCTTTGGCAGTAACCCAAGAGAGGATCAGAAGGTGGAGAAGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp TCTAGAGTTGGTGGGAAGAAACTCTGCTGGATCTACTCACCTGCAGATCTTCCAGAGAACGAGCTGGGCTaGGGGCACTCCCTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: SRVGGKKLCWIYSPADLPENELG*GHSLWQ
Trigger: CTGCCACAGGGAGTGCCCCCAGCCCAGCTCGTTCTC...TGGAAGATCTGCAGGTGAGTAGATCCAGCAGAGTTTCTTCCCACCAACTCTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp ATCACCTGGGTACTCCCAAAGAGAAAACCTGTGCTGAGAACGAGCTGGGCTGGGAGGCCAAGGATCCAATaGGCACACCATGAGGACCCA +
Preference number: 4 (lower is better)
Translates to: ITWVLPKRKPVLRTSWAGRPRIQ*AHHEDP
Trigger: TGGGTCCTCATGGTGTGCCCATTGGATCCTTGGCCT...CCCAGCCCAGCTCGTTCTCAGCACAGGTTTTCTCTTTGGGAGTACCCAGGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp GCGGCCTCACCTCGAACCCATGCGGGATCTTCCAAGAGTGCAATTCCCACAGCTGTCTTTCCGCCGTGGTaGAATCATCCGCAAGGTTTA +
Preference number: 4 (lower is better)
Translates to: AASPRTHAGSSKSAIPTAVFPPW*NHPQGL
Trigger: TAAACCTTGCGGATGATTCCACCACGGCGGAAAGAC...AGCTGTGGGAATTGCACTCTTGGAAGATCCCGCATGGGTTCGAGGTGAGGCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR CCA 90 bp CTTTCACCTGAAAAACGGAGTCCAAATCTGGGGCAGGCAAATAATGAAACCCTCTCGGCATCCAGCGTCTaGGGGCGCTGGGGGATCGAG +
Preference number: 4 (lower is better)
Translates to: LSPEKRSPNLGQANNETLSASSV*GRWGIE
Trigger: CTCGATCCCCCAGCGCCCCCAGACGCTGGATGCCGA...GAGGGTTTCATTATTTGCCTGCCCCAGATTTGGACTCCGTTTTTCAGGTGAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR TCA 90 bp GCCGCAACACGATATGTGATGGTGCAGAGCTGTTCTGGCCTGAAAAGAACTTTCCCACCTCCCCAGACATaGAGGTCAGATAGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: AATRYVMVQSCSGLKRTFPPPQT*RSDSAG
Trigger: CCCTGCGCTATCTGACCTTCATGTCTGGGGAGGTGG...GAAAGTTCTTTTCAGGCCAGAACAGCTCTGCACCATCACATATCGTGTTGCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp GGGAAACCAGAATTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTCCTTGTCCCCAATGGTaGCGCCATCAGTCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: GKPEFSRLELDTPDDAQGPCPQW*RHQSGA
Trigger: GGCCCCAGACTGATGGCGTCACCATTGGGGACAAGG...ACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAATTCTGGTTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp AGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCAACGGGTAGGTGCGTTTTCTaGAGTCTGGTCAACCAGGTT +
Preference number: 4 (lower is better)
Translates to: RLLQWEAHCSHVLCGFPTGRCVF*SLVNQV
Trigger: AACCTGGTTGACCAGACTTCAGAAAACGCACCTACC...CGTTGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp TTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTGTTTTCATGACAAGGAGCTCGCCGTCCTaGGCCGTGTCTCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: FSRLELDTPDDAQGVFMTRSSPS*AVSPGG
Trigger: CCCACCTGGAGACACGGCTCAGGACGGCGAGCTCCT...TGTCATGAAAACACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp GCCGCAACACGATATGTGATGGTGCAGAGCTGTTCTGGCCTGAAAAGAACTTTCTCTGCTGCAGCAAGGTaGTGGGCTCCAGGCCGAGAT +
Preference number: 4 (lower is better)
Translates to: AATRYVMVQSCSGLKRTFSAAAR*WAPGRD
Trigger: ATCTCGGCCTGGAGCCCATCACCTTGCTGCAGCAGA...GAAAGTTCTTTTCAGGCCAGAACAGCTCTGCACCATCACATATCGTGTTGCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp TTAAGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCAGCTGAGGGGCGTTTCTaGGGATCCATCGCAATCATC +
Preference number: 4 (lower is better)
Translates to: LRLLQWEAHCSHVLCGFPAEGRF*GSIAII
Trigger: GATGATTGCGATGGATCCTCAGAAACGCCCCTCAGC...TGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp TGCAAAGCCGGGAGGCATCAAGCTCTAATTGTGGTGACCAGGCCCTCAGTCACAAGAAGAACGGGTGTTTaGGCACATGCTTCGCTGAGG +
Preference number: 4 (lower is better)
Translates to: CKAGRHQALIVVTRPSVTRRTGV*AHASLR
Trigger: CCTCAGCGAAGCATGTGCTCAAACACCCGTTCTTCT...TGTGACTGAGGGCCTGGTCACCACAATTAGAGCTTGATGCCTCCCGGCTTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp TCTGTGATCAATGAGAAATCTCACACTGCAGGACGACACCCTCTGAACTCCGTCTCTGGAGGGGGACAGTaGTGTTCTCCCGCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: SVINEKSHTAGRHPLNSVSGGGQ*CSPASP
Trigger: TGGACTGGCGGGAGAACATCACTGTCCCCCTCCAGA...GACGGAGTTCAGAGGGTGTCGTCCTGCAGTGTGAGATTTCTCATTGATCACAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp TTTGCAGACATCATGACCGTAAGGCTTTTGGGGCCAGCATCTTCCCAGTTCCCTTACTCGCGCTGTCTCTaGGGCCCTCCTTTGCAGACA +
Preference number: 4 (lower is better)
Translates to: FADIMTVRLLGPASSQFPYSRCL*GPPLQT
Trigger: TGTCTGCAAAGGAGGGCCTCAGAGACAGCGCGAGTA...AGGGAACTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp TCTGTGATCAATGAGAAATCTCACACTGCAGGACGACACCCTCTGAACTCCGTCAGGGCTTTCTCCTGGTaGCCAGGAGGGTCCCATTCG +
Preference number: 4 (lower is better)
Translates to: SVINEKSHTAGRHPLNSVRAFSW*PGGSHS
Trigger: CGAATGGGACCCTCCTGGTCACCAGGAGAAAGCCCT...GACGGAGTTCAGAGGGTGTCGTCCTGCAGTGTGAGATTTCTCATTGATCACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp TGCAAAGCCGGGAGGCATCAAGCTCTAATTGTGGTGACCAGGCCCTCAGTCACAAAGCCGCCTAGCTCCTaGGAGATGAGAATGCCAGTA +
Preference number: 4 (lower is better)
Translates to: CKAGRHQALIVVTRPSVTKPPSS*EMRMPV
Trigger: TACTGGCATTCTCATCTCTCAGGAGCTAGGCGGCTT...TGTGACTGAGGGCCTGGTCACCACAATTAGAGCTTGATGCCTCCCGGCTTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR TCA 90 bp GTACAACCAAGGATTGCCCTGCATCTGCATGCCACTCTGATGTCCTGCCAGACAGAGAGGCAGATCACTTaGGGCCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: VQPRIALHLHATLMSCQTERQIT*GQEFET
Trigger: GGTCTCAAACTCCTGGCCTCAAGTGATCTGCCTCTC...TGTCTGGCAGGACATCAGAGTGGCATGCAGATGCAGGGCAATCCTTGGTTGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR GCA 90 bp TTAAGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCAGCCGATGACAAAGTCTaGTGCTTCTCTCCGGTCAGG +
Preference number: 4 (lower is better)
Translates to: LRLLQWEAHCSHVLCGFPADDKV*CFSPVR
Trigger: CCTGACCGGAGAGAAGCAGCAGACTTTGTCATCGGC...TGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp CACAAAAGTCAGCGACCAGAGACCATGAGGGACATGGGCCGCAGAGCACTGCTTACAGCGACATTGATGTaGATCACCTTCCTCAGACCC +
Preference number: 4 (lower is better)
Translates to: HKSQRPETMRDMGRRALLTATLM*ITFLRP
Trigger: GGGTCTGAGGAAGGTGATGCACATCAATGTCGCTGT...AAGCAGTGCTCTGCGGCCCATGTCCCTCATGGTCTCTGGTCGCTGACTTTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR GCA 90 bp ACACCAGATGATGCCCAAGGTGTTTTCATGACAAGTACCCACACGAGATCTCTTGGGTGGAAGGGCAGCTaGTGCTGCTGCTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: TPDDAQGVFMTSTHTRSLGWKGS*CCCCCR
Trigger: CCTGCAGCAGCAGCAGCAGCAGCTGCCCTTCCACCC...AAGAGATCTCGTGTGGGTACTTGTCATGAAAACACCTTGGGCATCATCTGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp AAGACTCAAGAAGCAACAAGAGAAATTCTGGCACACGTGCCCAAGAGAGGTTTAGGGACGTGCTGGGGCTaGTGGTGCCCGAGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: KTQEATREILAHVPKRGLGTCWG*WCPSSL
Trigger: CAGAGAGCTCGGGCACCAGCAGCCCCAGCACGTCCC...TAAACCTCTCTTGGGCACGTGTGCCAGAATTTCTCTTGTTGCTTCTTGAGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp TTAAGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCACGGATCACGTTCGGGTaGTCATCCGATTCTCGCAAC +
Preference number: 4 (lower is better)
Translates to: LRLLQWEAHCSHVLCGFPRITFG*SSDSRN
Trigger: GTTGCGAGAATCGGATGAGCACCCGAACGTGATCCG...TGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp CCCTCCTTTGCAGACATCATGACCGTAAGGCTTTTGGGGCCAGCATCTTCCCAGGCAATGTACTGGAATTaGCGGTCCTTCTCCGTGCAG +
Preference number: 4 (lower is better)
Translates to: PSFADIMTVRLLGPASSQAMYWN*RSFSVQ
Trigger: CTGCACGGAGAAGGACCGGCAATTCCAGTACATTGC...CTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAAGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp GCACCTTCTCCACCTTCTGATCCTCTCTTGGGTTACTGCCAAAGCCCACAGGTACTCTTGCAGGGTGGCTaGACACAGCTCGATGGCAAT +
Preference number: 4 (lower is better)
Translates to: APSPPSDPLLGYCQSPQVLLQGG*TQLDGN
Trigger: ATTGCCATCGAGCTGTGTGCAGCCACCCTGCAAGAG...TACCTGTGGGCTTTGGCAGTAACCCAAGAGAGGATCAGAAGGTGGAGAAGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp GCACCTTCTCCACCTTCTGATCCTCTCTTGGGTTACTGCCAAAGCCCACAGGTATGCTCCACATACTCTTaGAGGGTGGCTGCACACAGC +
Preference number: 4 (lower is better)
Translates to: APSPPSDPLLGYCQSPQVCSTYS*RVAAHS
Trigger: GCTGTGTGCAGCCACCCTGCAAGAGTATGTGGAGCA...TACCTGTGGGCTTTGGCAGTAACCCAAGAGAGGATCAGAAGGTGGAGAAGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp GACAGAGAAAGGAACGGCTCTGGGAAAGCCAAACCTGGCCAAAGTCCAACTTCCTGCTCCACATACTCTTaGAGGGTGGCTGCACACAGC +
Preference number: 4 (lower is better)
Translates to: DRERNGSGKAKPGQSPTSCSTYS*RVAAHS
Trigger: GCTGTGTGCAGCCACCCTGCAAGAGTATGTGGAGCA...GGAAGTTGGACTTTGGCCAGGTTTGGCTTTCCCAGAGCCGTTCCTTTCTCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp GGGAAACCAGAATTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTCGATCCAGCCTTCTGTaGCAGGCACCCCAGATCGGC +
Preference number: 4 (lower is better)
Translates to: GKPEFSRLELDTPDDAQGRSSLL*QAPQIG
Trigger: GCCGATCTGGGGTGCCTGGCACAGAAGGCTGGATCG...ACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAATTCTGGTTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp TTTGCAGACATCATGACCGTAAGGCTTTTGGGGCCAGCATCTTCCCAGTTCCCTCCGCCTCTCTCTAACTaGTTCACGATCGGGCCATCC +
Preference number: 4 (lower is better)
Translates to: FADIMTVRLLGPASSQFPPPLSN*FTIGPS
Trigger: GGATGGCCCGATCGTGAAGCAGTTAGAGAGAGGCGG...AGGGAACTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp ATCACCTGGGTACTCCCAAAGAGAAAACCTGTGCTGAGAACGAGCTGGGCTGGGACAGGTAAAGCACCTTaGAGCCGTATGGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: ITWVLPKRKPVLRTSWAGTGKAP*SRMGSS
Trigger: AGAGCTCCCCATACGGCTGCAAGGTGCTTTACCTGT...CCCAGCCCAGCTCGTTCTCAGCACAGGTTTTCTCTTTGGGAGTACCCAGGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp GCACCTTCTCCACCTTCTGATCCTCTCTTGGGTTACTGCCAAAGCCCACAGGTATCCAGCACAGAAGGCTaGAAAAGTGGAACTGGCCCC +
Preference number: 4 (lower is better)
Translates to: APSPPSDPLLGYCQSPQVSSTEG*KSGTGP
Trigger: GGGGCCAGTTCCACTTTTGCAGCCTTCTGTGCTGGA...TACCTGTGGGCTTTGGCAGTAACCCAAGAGAGGATCAGAAGGTGGAGAAGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp TGGTGCCTTCTTTCACATGTTAGCTGTCCCCATTTCACCTATCAGGAAGGAGTCGACCCCCAAGTGCCGTaGAGGACGCCACGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: WCLLSHVSCPHFTYQEGVDPQVP*RTPRSC
Trigger: GCAACTTCGTGGCGTCCTGCACGGCACTTGGGGGTC...GACTCCTTCCTGATAGGTGAAATGGGGACAGCTAACATGTGAAAGAAGGCACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR CCA 90 bp ATCACCTGGGTACTCCCAAAGAGAAAACCTGTGCTGAGAACGAGCTGGGCTGGGCTCTTCCACATGTGTTaGGACCTGCAGGACTGGATC +
Preference number: 4 (lower is better)
Translates to: ITWVLPKRKPVLRTSWAGLFHMC*DLQDWI
Trigger: GATCCAGTCCTGCAGGTCCCAACACATGTGGAAGAG...CCCAGCCCAGCTCGTTCTCAGCACAGGTTTTCTCTTTGGGAGTACCCAGGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp TGTCCAACCTGGGAGGGTGGAATTTCGGCTCACCTGGAGAGGATGCCTGATGACGCCATCATTAGGATCTaGGAGAAAGGCAGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: CPTWEGGISAHLERMPDDAIIRI*EKGRLF
Trigger: GAAGAGCCTGCCTTTCTCCCAGATCCTAATGATGGC...GTCATCAGGCATCCTCTCCAGGTGAGCCGAAATTCCACCCTCCCAGGTTGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp AGTACTTCTAAAAAGCTCAACAGCCTTCCAGGATTGGAGAAGTCCCATAACCTGAGTGGTTGGAGGCCCTaGGGGACGTGCTGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: STSKKLNSLPGLEKSHNLSGWRP*GTCWGC
Trigger: GCAGCCCCAGCACGTCCCCCAGGGCCTCCAACCACT...CAGGTTATGGGACTTCTCCAATCCTGGAAGGCTGTTGAGCTTTTTAGAAGTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp ACACCAGATGATGCCCAAGGTGTTTTCATGACAAGTACCCACACGAGATCTCTTAGCAGAGCGAGTGGTTaGAGGCCCTGGGGGACGTGC +
Preference number: 4 (lower is better)
Translates to: TPDDAQGVFMTSTHTRSLSRASG*RPWGTC
Trigger: GCACGTCCCCCAGGGCCTCCAACCACTCGCTCTGCT...AAGAGATCTCGTGTGGGTACTTGTCATGAAAACACCTTGGGCATCATCTGGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp GCACCTTCTCCACCTTCTGATCCTCTCTTGGGTTACTGCCAAAGCCCACAGGTAGATTCTCGCAACAGCTaGACCTCACGGTCTGCGAAG +
Preference number: 4 (lower is better)
Translates to: APSPPSDPLLGYCQSPQVDSRNS*TSRSAK
Trigger: CTTCGCAGACCGTGAGGTCCAGCTGTTGCGAGAATC...TACCTGTGGGCTTTGGCAGTAACCCAAGAGAGGATCAGAAGGTGGAGAAGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp TCTGTGATCAATGAGAAATCTCACACTGCAGGACGACACCCTCTGAACTCCGTCTCTGGTCCTGAAGGCTaGCCCCTGTCTGGGTCTTCG +
Preference number: 4 (lower is better)
Translates to: SVINEKSHTAGRHPLNSVSGPEG*PLSGSS
Trigger: CGAAGACCCAGACAGGGGCCAGCCTTCAGGACCAGA...GACGGAGTTCAGAGGGTGTCGTCCTGCAGTGTGAGATTTCTCATTGATCACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp CCCTCCTTTGCAGACATCATGACCGTAAGGCTTTTGGGGCCAGCATCTTCCCAGTTGTTCCACCGGCCTTaGGGACGAAGGAGTTTGACT +
Preference number: 4 (lower is better)
Translates to: PSFADIMTVRLLGPASSQLFHRP*GRRSLT
Trigger: AGTCAAACTCCTTCGTCCCCAAGGCCGGTGGAACAA...CTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAAGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp AGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCAACGTGGGAAAGCCAAACCTaGCCAAAGTCCAACTTCCTG +
Preference number: 4 (lower is better)
Translates to: RLLQWEAHCSHVLCGFPTWESQT*PKSNFL
Trigger: CAGGAAGTTGGACTTTGGCCAGGTTTGGCTTTCCCA...CGTTGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp GACAGAGAAAGGAACGGCTCTGGGAAAGCCAAACCTGGCCAAAGTCCAACTTCCTCCAACCTGGGAGGGTaGAATTTCGGCTCACCTGGA +
Preference number: 4 (lower is better)
Translates to: DRERNGSGKAKPGQSPTSSNLGG*NFGSPG
Trigger: TCCAGGTGAGCCGAAATTCCACCCTCCCAGGTTGGA...GGAAGTTGGACTTTGGCCAGGTTTGGCTTTCCCAGAGCCGTTCCTTTCTCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp AGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCAACGCTTTGGCCAAAGTGTTaGTTAAGGCTGCTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: RLLQWEAHCSHVLCGFPTLWPKC*LRLLQW
Trigger: CCACTGGAGCAGCCTTAACCAACACTTTGGCCAAAG...CGTTGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp ACCCATGCGGGATCTTCCAAGAGTGCAATTCCCACAGCTCCACTTGCTCAAGGACGCGAAGCTTGTCTGTaGCTGGGAAAGACCGGCAAT +
Preference number: 4 (lower is better)
Translates to: THAGSSKSAIPTAPLAQGREACL*LGKTGN
Trigger: ATTGCCGGTCTTTCCCAGCCACAGACAAGCTTCGCG...TCCTTGAGCAAGTGGAGCTGTGGGAATTGCACTCTTGGAAGATCCCGCATGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR CCA 90 bp GTACAACCAAGGATTGCCCTGCATCTGCATGCCACTCTGATGTCCTGCCAGACATGGCCTGTTAGGAACTaGGCCACACAGCAAGAGGTG +
Preference number: 4 (lower is better)
Translates to: VQPRIALHLHATLMSCQTWPVRN*ATQQEV
Trigger: CACCTCTTGCTGTGTGGCCCAGTTCCTAACAGGCCA...TGTCTGGCAGGACATCAGAGTGGCATGCAGATGCAGGGCAATCCTTGGTTGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR CCA 90 bp CCTCCCGCCACATCAACTCTGTGCTCCTCCTCTACCGTGCCAGGGACACTCCCATATGGTTCTGGAAGCTaGAAGTCTGAGATTGGTTTC +
Preference number: 4 (lower is better)
Translates to: PPATSTLCSSSTVPGTLPYGSGS*KSEIGF
Trigger: GAAACCAATCTCAGACTTCCAGCTTCCAGAACCATA...TGGGAGTGTCCCTGGCACGGTAGAGGAGGAGCACAGAGTTGATGTGGCGGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR TCA 90 bp GACAGAGAAAGGAACGGCTCTGGGAAAGCCAAACCTGGCCAAAGTCCAACTTCCGTAGAGGATTCCATCTaGACTTCGGCATGGGGATGC +
Preference number: 4 (lower is better)
Translates to: DRERNGSGKAKPGQSPTSVEDSI*TSAWGC
Trigger: GCATCCCCATGCCGAAGTTCAGATGGAATCCTCTAC...GGAAGTTGGACTTTGGCCAGGTTTGGCTTTCCCAGAGCCGTTCCTTTCTCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp TGCAAAGCCGGGAGGCATCAAGCTCTAATTGTGGTGACCAGGCCCTCAGTCACATGGTGTCGTACATGGTaGTGGTGTATTCTGTTCGCC +
Preference number: 4 (lower is better)
Translates to: CKAGRHQALIVVTRPSVTWCRTW*WCILFA
Trigger: GGCGAACAGAATACACCATCACCATGTACGACACCA...TGTGACTGAGGGCCTGGTCACCACAATTAGAGCTTGATGCCTCCCGGCTTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp TCTAGAGTTGGTGGGAAGAAACTCTGCTGGATCTACTCACCTGCAGATCTTCCAGGTACTTCCACTTTGTaGTGCGCCCCACCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: SRVGGKKLCWIYSPADLPGTSTL*CAPPPQ
Trigger: CTGGGGAGGTGGGGCGCATCACAAAGTGGAAGTACC...TGGAAGATCTGCAGGTGAGTAGATCCAGCAGAGTTTCTTCCCACCAACTCTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp ACACCAGATGATGCCCAAGGTGTTTTCATGACAAGTACCCACACGAGATCTCTTCGTCCGTGCTGGGCGTaGTCACACACTCCCCCTTGT +
Preference number: 4 (lower is better)
Translates to: TPDDAQGVFMTSTHTRSLRPCWA*SHTPPC
Trigger: ACAAGGGGGAGTGTGTGATCACGCCCAGCACGGACG...AAGAGATCTCGTGTGGGTACTTGTCATGAAAACACCTTGGGCATCATCTGGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp ATCACCTGGGTACTCCCAAAGAGAAAACCTGTGCTGAGAACGAGCTGGGCTGGGGGTAGGTGCGTTTTCTaGAGTCTGGTCAACCAGGTT +
Preference number: 4 (lower is better)
Translates to: ITWVLPKRKPVLRTSWAGGRCVF*SLVNQV
Trigger: AACCTGGTTGACCAGACTTCAGAAAACGCACCTACC...CCCAGCCCAGCTCGTTCTCAGCACAGGTTTTCTCTTTGGGAGTACCCAGGTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp GGGAAACCAGAATTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTTCTGCTGCAGCAAGGTaGTGGGCTCCAGGCCGAGAT +
Preference number: 4 (lower is better)
Translates to: GKPEFSRLELDTPDDAQGSAAAR*WAPGRD
Trigger: ATCTCGGCCTGGAGCCCATCACCTTGCTGCAGCAGA...ACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAATTCTGGTTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp TCTAGAGTTGGTGGGAAGAAACTCTGCTGGATCTACTCACCTGCAGATCTTCCATCTGGAGGGGGACAGTaGTGTTCTCCCGCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: SRVGGKKLCWIYSPADLPSGGGQ*CSPASP
Trigger: TGGACTGGCGGGAGAACATCACTGTCCCCCTCCAGA...TGGAAGATCTGCAGGTGAGTAGATCCAGCAGAGTTTCTTCCCACCAACTCTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp TGCAAAGCCGGGAGGCATCAAGCTCTAATTGTGGTGACCAGGCCCTCAGTCACACTCGGAGGAGATCTCTaGCAGAACCACCTTTATAGG +
Preference number: 4 (lower is better)
Translates to: CKAGRHQALIVVTRPSVTLGGDL*QNHLYR
Trigger: CCTATAAAGGTGGTTCTGTCAGAGATCTCCTCCGAG...TGTGACTGAGGGCCTGGTCACCACAATTAGAGCTTGATGCCTCCCGGCTTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp TCTGTGATCAATGAGAAATCTCACACTGCAGGACGACACCCTCTGAACTCCGTCTACTCGCGCTGTCTCTaGGGCCCTCCTTTGCAGACA +
Preference number: 4 (lower is better)
Translates to: SVINEKSHTAGRHPLNSVYSRCL*GPPLQT
Trigger: TGTCTGCAAAGGAGGGCCTCAGAGACAGCGCGAGTA...GACGGAGTTCAGAGGGTGTCGTCCTGCAGTGTGAGATTTCTCATTGATCACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp CCAGCATCTTCCCAGTTCCCTGTAGGTCACGAGGGGCCACTTCTCCCACTTCCTCACATCTGTGATCAATaGGAAATCTCACACTGCAGG +
Preference number: 4 (lower is better)
Translates to: PASSQFPVGHEGPLLPLPHICDQ*EISHCR
Trigger: CCTGCAGTGTGAGATTTCTCATTGATCACAGATGTG...AGGAAGTGGGAGAAGTGGCCCCTCGTGACCTACAGGGAACTGGGAAGATGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp GCACCTTCTCCACCTTCTGATCCTCTCTTGGGTTACTGCCAAAGCCCACAGGTACTTCGCTGCTCTCCTTaGAGGCCAGGGAACTCTTTA +
Preference number: 4 (lower is better)
Translates to: APSPPSDPLLGYCQSPQVLRCSP*RPGNSL
Trigger: TAAAGAGTTCCCTGGCCTTCAAGGAGAGCAGCGAAG...TACCTGTGGGCTTTGGCAGTAACCCAAGAGAGGATCAGAAGGTGGAGAAGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp TCTGTGATCAATGAGAAATCTCACACTGCAGGACGACACCCTCTGAACTCCGTCAGAGAAAACCTGTGCTaGGAACGAGCTGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SVINEKSHTAGRHPLNSVRENLC*ERAGLG
Trigger: CCCCAGCCCAGCTCGTTCTCAGCACAGGTTTTCTCT...GACGGAGTTCAGAGGGTGTCGTCCTGCAGTGTGAGATTTCTCATTGATCACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp GACAGAGAAAGGAACGGCTCTGGGAAAGCCAAACCTGGCCAAAGTCCAACTTCCCGGACCAGATCCCTGTaGTTCTGGGACAGAAGAGAT +
Preference number: 4 (lower is better)
Translates to: DRERNGSGKAKPGQSPTSRTRSL*FWDRRD
Trigger: ATCTCTTCTGTCCCAGAATCACAGGGATCTGGTCCG...GGAAGTTGGACTTTGGCCAGGTTTGGCTTTCCCAGAGCCGTTCCTTTCTCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp AGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCAACGCCCAAGGTGTTTTCATaGCAAGTACCCACACGAGAT +
Preference number: 4 (lower is better)
Translates to: RLLQWEAHCSHVLCGFPTPKVFS*QVPTRD
Trigger: ATCTCGTGTGGGTACTTGTCATGAAAACACCTTGGG...CGTTGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp CCCAGTTCCCAGAGGATCACAAGGCCAAGGATCCAATGGGCACACCATGAGGACCCCAAGGTGTTTTCATaGCAAGTACCCACACGAGAT +
Preference number: 4 (lower is better)
Translates to: PSSQRITRPRIQWAHHEDPKVFS*QVPTRD
Trigger: ATCTCGTGTGGGTACTTGTCATGAAAACACCTTGGG...GTCCTCATGGTGTGCCCATTGGATCCTTGGCCTTGTGATCCTCTGGGAACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp GACAGAGAAAGGAACGGCTCTGGGAAAGCCAAACCTGGCCAAAGTCCAACTTCCCCGCAACACGATATGTaGTGGTGCAGAGCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: DRERNGSGKAKPGQSPTSPQHDM*WCRAVL
Trigger: CAGAACAGCTCTGCACCATCACATATCGTGTTGCGG...GGAAGTTGGACTTTGGCCAGGTTTGGCTTTCCCAGAGCCGTTCCTTTCTCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp AGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCAACGATAACTCCAGGTTGGTaGGGGAAGGGACAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: RLLQWEAHCSHVLCGFPTITPGW*GKGQGK
Trigger: TTTTCCTTGTCCCTTCCCTCACCAACCTGGAGTTAT...CGTTGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp GCACCTTCTCCACCTTCTGATCCTCTCTTGGGTTACTGCCAAAGCCCACAGGTAAGTTGGACTGAAAGGTaGGGTCACTCCACACCTAGG +
Preference number: 4 (lower is better)
Translates to: APSPPSDPLLGYCQSPQVSWTER*GHSTPR
Trigger: CCTAGGTGTGGAGTGACCTCACCTTTCAGTCCAACT...TACCTGTGGGCTTTGGCAGTAACCCAAGAGAGGATCAGAAGGTGGAGAAGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR TCA 90 bp TCTGTGATCAATGAGAAATCTCACACTGCAGGACGACACCCTCTGAACTCCGTCTTTGCCAAGTCCAGCTaGAGCCGCCTAGCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: SVINEKSHTAGRHPLNSVFAKSS*SRLAPE
Trigger: CTCAGGAGCTAGGCGGCTTCAGCTGGACTTGGCAAA...GACGGAGTTCAGAGGGTGTCGTCCTGCAGTGTGAGATTTCTCATTGATCACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR GCA 90 bp ATCACCTGGGTACTCCCAAAGAGAAAACCTGTGCTGAGAACGAGCTGGGCTGGGACAGCGACATTGATGTaGATCACCTTCCTCAGACCC +
Preference number: 4 (lower is better)
Translates to: ITWVLPKRKPVLRTSWAGTATLM*ITFLRP
Trigger: GGGTCTGAGGAAGGTGATGCACATCAATGTCGCTGT...CCCAGCCCAGCTCGTTCTCAGCACAGGTTTTCTCTTTGGGAGTACCCAGGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp TTTGCAGACATCATGACCGTAAGGCTTTTGGGGCCAGCATCTTCCCAGTTCCCTAGTTCCTTCTGGAACTaGTGGTGCTGGAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: FADIMTVRLLGPASSQFPSSFWN*WCWSCC
Trigger: GCAGCAGCTCCAGCACCAGCAGTTCCAGAAGGAACT...AGGGAACTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp GAGATTAGAAAGGGGTTAGAAAGCTCGGGAAATGTTGGCAAAACACCCTTTCATGGGACGTGCTGGGGCTaGTGGTGCCCGAGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: EIRKGLESSGNVGKTPFHGTCWG*WCPSSL
Trigger: CAGAGAGCTCGGGCACCAGCAGCCCCAGCACGTCCC...ATGAAAGGGTGTTTTGCCAACATTTCCCGAGCTTTCTAACCCCTTTCTAATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR GCA 90 bp TGCAAAGCCGGGAGGCATCAAGCTCTAATTGTGGTGACCAGGCCCTCAGTCACATGCGCAAAGTCCTTCTaGTCCACATACTCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: CKAGRHQALIVVTRPSVTCAKSF*STYSCR
Trigger: CCTGCAAGAGTATGTGGAGCAGAAGGACTTTGCGCA...TGTGACTGAGGGCCTGGTCACCACAATTAGAGCTTGATGCCTCCCGGCTTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp TTTGCAGACATCATGACCGTAAGGCTTTTGGGGCCAGCATCTTCCCAGTTCCCTTCGTGCTTCTCTGGGTaGAAGCAGTCAAGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: FADIMTVRLLGPASSQFPSCFSG*KQSRLQ
Trigger: CTGCAGCCTTGACTGCTTGCACCCAGAGAAGCACGA...AGGGAACTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp AAGACTCAAGAAGCAACAAGAGAAATTCTGGCACACGTGCCCAAGAGAGGTTTAGCACTGGGCCACGGCTaGCTCCAGAACAGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: KTQEATREILAHVPKRGLALGHG*LQNRAA
Trigger: GGCTGCTCTGTTCTGGAGGCAGCCGTGGCCCAGTGC...TAAACCTCTCTTGGGCACGTGTGCCAGAATTTCTCTTGTTGCTTCTTGAGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp TCTGTGATCAATGAGAAATCTCACACTGCAGGACGACACCCTCTGAACTCCGTCGGGAGCAGCAGGAAATaGGGTCTGGCCACGTTTCTG +
Preference number: 4 (lower is better)
Translates to: SVINEKSHTAGRHPLNSVGSSRK*GLATFL
Trigger: CAGAAACGTGGCCAGACCGCATTTCCTGCTGCTCCC...GACGGAGTTCAGAGGGTGTCGTCCTGCAGTGTGAGATTTCTCATTGATCACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp GCACCTTCTCCACCTTCTGATCCTCTCTTGGGTTACTGCCAAAGCCCACAGGTAACAGGTAAAGCACCTTaGAGCCGTATGGGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: APSPPSDPLLGYCQSPQVTGKAP*SRMGSS
Trigger: AGAGCTCCCCATACGGCTGCAAGGTGCTTTACCTGT...TACCTGTGGGCTTTGGCAGTAACCCAAGAGAGGATCAGAAGGTGGAGAAGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp GCACCTTCTCCACCTTCTGATCCTCTCTTGGGTTACTGCCAAAGCCCACAGGTATGCCTGATGACTTCCTaGCAGGAGAAGCCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: APSPPSDPLLGYCQSPQVCLMTS*QEKPKP
Trigger: TGGCTTTGGCTTCTCCTGGCAGGAAGTCATCAGGCA...TACCTGTGGGCTTTGGCAGTAACCCAAGAGAGGATCAGAAGGTGGAGAAGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp CCAGCATCTTCCCAGTTCCCTGTAGGTCACGAGGGGCCACTTCTCCCACTTCCTTGGCTCGACATAAGATaGCGCCATCAGCAGAATTAT +
Preference number: 4 (lower is better)
Translates to: PASSQFPVGHEGPLLPLPWLDIR*RHQQNY
Trigger: ATAATTCTGCTGATGGCGGCATCTTATGTCGAGCCA...AGGAAGTGGGAGAAGTGGCCCCTCGTGACCTACAGGGAACTGGGAAGATGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp CTTTCACCTGAAAAACGGAGTCCAAATCTGGGGCAGGCAAATAATGAAACCCTCCCTATAAGCGCTGGGTaGCGCGGCTTCTTCCGGTCG +
Preference number: 4 (lower is better)
Translates to: LSPEKRSPNLGQANNETLPISAG*RGFFRS
Trigger: CGACCGGAAGAAGCCGCGGCACCCAGCGCTTATAGG...GAGGGTTTCATTATTTGCCTGCCCCAGATTTGGACTCCGTTTTTCAGGTGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR GCA 90 bp CCCTCCAAATGGATGTGGGCTCACAGCACATTACTAGTCCCTCTCATGAGTGGTGCCACTCTGATGTCCTaGCAGACATTCTCATGGGCC +
Preference number: 4 (lower is better)
Translates to: PSKWMWAHSTLLVPLMSGATLMS*QTFSWA
Trigger: GGCCCATGAGAATGTCTGGCAGGACATCAGAGTGGC...ACCACTCATGAGAGGGACTAGTAATGTGCTGTGAGCCCACATCCATTTGGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR CCA 90 bp GGTGATCACACCCAGGTCAGAAATGACCACCTAGAGCACGACACCATCACTCACTTCTCCAGTTCCTTCTaGAACTGCTGGTGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: GDHTQVRNDHLEHDTITHFSSSF*NCWCWS
Trigger: GCTCCAGCACCAGCAGTTCCAGAAGGAACTGGAGAA...GTGAGTGATGGTGTCGTGCTCTAGGTGGTCATTTCTGACCTGGGTGTGATCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR CCA 90 bp CCCAGTTCCCAGAGGATCACAAGGCCAAGGATCCAATGGGCACACCATGAGGACCAACTATCACCACGCTaGTTTCCTCATCTCCATCGT +
Preference number: 4 (lower is better)
Translates to: PSSQRITRPRIQWAHHEDQLSPR*FPHLHR
Trigger: ACGATGGAGATGAGGAAACCAGCGTGGTGATAGTTG...GTCCTCATGGTGTGCCCATTGGATCCTTGGCCTTGTGATCCTCTGGGAACTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp TTTGCAGACATCATGACCGTAAGGCTTTTGGGGCCAGCATCTTCCCAGTTCCCTCATACTCTTGCAGGGTaGCTGCACACAGCTCGATGG +
Preference number: 4 (lower is better)
Translates to: FADIMTVRLLGPASSQFPHTLAG*LHTARW
Trigger: CCATCGAGCTGTGTGCAGCCACCCTGCAAGAGTATG...AGGGAACTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp AAGACTCAAGAAGCAACAAGAGAAATTCTGGCACACGTGCCCAAGAGAGGTTTATTGAGGGAGTGGAGGTaGGCCAGGCCCGAGGTGGTC +
Preference number: 4 (lower is better)
Translates to: KTQEATREILAHVPKRGLLREWR*ARPEVV
Trigger: GACCACCTCGGGCCTGGCCCACCTCCACTCCCTCAA...TAAACCTCTCTTGGGCACGTGTGCCAGAATTTCTCTTGTTGCTTCTTGAGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp GCCGCAACACGATATGTGATGGTGCAGAGCTGTTCTGGCCTGAAAAGAACTTTCTGGAAGAGTCTCTCGTaGCTGCACAGCTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: AATRYVMVQSCSGLKRTFWKSLS*LHSSMA
Trigger: GGCCATGGAGCTGTGCAGCCACGAGAGACTCTTCCA...GAAAGTTCTTTTCAGGCCAGAACAGCTCTGCACCATCACATATCGTGTTGCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp TTTGCAGACATCATGACCGTAAGGCTTTTGGGGCCAGCATCTTCCCAGTTCCCTGCAGCTCAAGGCACTTaGTTTGGGAAGCCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: FADIMTVRLLGPASSQFPAAQGT*FGKPGL
Trigger: GAGACCAGGCTTCCCAAACCAAGTGCCTTGAGCTGC...AGGGAACTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp CTACAGACCAAACAGCTAAGCCGCAACACGATATGTGATGGTGCAGAGCTGTTCCACACCTCATGCTCATaGCTCCTGCTGCCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: LQTKQLSRNTICDGAELFHTSCS*LLLPLQ
Trigger: CTGCAGAGGCAGCAGGAGCCATGAGCATGAGGTGTG...GAACAGCTCTGCACCATCACATATCGTGTTGCGGCTTAGCTGTTTGGTCTGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp TGCAAAGCCGGGAGGCATCAAGCTCTAATTGTGGTGACCAGGCCCTCAGTCACAGATCCCCCAACTGGCTaGAGAAAGTACATGGACAAC +
Preference number: 4 (lower is better)
Translates to: CKAGRHQALIVVTRPSVTDPPTG*RKYMDN
Trigger: GTTGTCCATGTACTTTCTCCAGCCAGTTGGGGGATC...TGTGACTGAGGGCCTGGTCACCACAATTAGAGCTTGATGCCTCCCGGCTTTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp ATCACCTGGGTACTCCCAAAGAGAAAACCTGTGCTGAGAACGAGCTGGGCTGGGCTTCTGATCCTCTCTTaGGTTACTGCCAAAGCCCAC +
Preference number: 4 (lower is better)
Translates to: ITWVLPKRKPVLRTSWAGLLILS*VTAKAH
Trigger: GTGGGCTTTGGCAGTAACCCAAGAGAGGATCAGAAG...CCCAGCCCAGCTCGTTCTCAGCACAGGTTTTCTCTTTGGGAGTACCCAGGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp GCTACTCGCGCTGTCTCTGAGGCCCTCCTTTGCAGACATCATGACCGTAAGGCTCTGTTAAATCACTCGTaGCACCTTCTCCACCTTCTG +
Preference number: 4 (lower is better)
Translates to: ATRAVSEALLCRHHDRKALLNHS*HLLHLL
Trigger: CAGAAGGTGGAGAAGGTGCCACGAGTGATTTAACAG...AGCCTTACGGTCATGATGTCTGCAAAGGAGGGCCTCAGAGACAGCGCGAGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp GCTACTCGCGCTGTCTCTGAGGCCCTCCTTTGCAGACATCATGACCGTAAGGCTGGTGCAGAGCTGTTCTaGCCTGAAAAGAACTTTCCA +
Preference number: 4 (lower is better)
Translates to: ATRAVSEALLCRHHDRKAGAELF*PEKNFP
Trigger: TGGAAAGTTCTTTTCAGGCCAGAACAGCTCTGCACC...AGCCTTACGGTCATGATGTCTGCAAAGGAGGGCCTCAGAGACAGCGCGAGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp TGTCCAACCTGGGAGGGTGGAATTTCGGCTCACCTGGAGAGGATGCCTGATGACGGTGCAGAGCTGTTCTaGCCTGAAAAGAACTTTCCA +
Preference number: 4 (lower is better)
Translates to: CPTWEGGISAHLERMPDDGAELF*PEKNFP
Trigger: TGGAAAGTTCTTTTCAGGCCAGAACAGCTCTGCACC...GTCATCAGGCATCCTCTCCAGGTGAGCCGAAATTCCACCCTCCCAGGTTGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp CTCTGTCTCAGGCCACCTGGCATGCGGCATGGGAGCAGCAGGAAATGCGGTCTGCAGGTGAAAATGTTTTaGTGCCTAATGACTTGTGGA +
Preference number: 4 (lower is better)
Translates to: LCLRPPGMRHGSSRKCGLQVKMF*CLMTCG
Trigger: TCCACAAGTCATTAGGCACCAAAACATTTTCACCTG...CAGACCGCATTTCCTGCTGCTCCCATGCCGCATGCCAGGTGGCCTGAGACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp TGCAAAGCCGGGAGGCATCAAGCTCTAATTGTGGTGACCAGGCCCTCAGTCACAGAATTTCGGCTCACCTaGAGAGGATGCCTGATGACT +
Preference number: 4 (lower is better)
Translates to: CKAGRHQALIVVTRPSVTEFRLT*RGCLMT
Trigger: AGTCATCAGGCATCCTCTCCAGGTGAGCCGAAATTC...TGTGACTGAGGGCCTGGTCACCACAATTAGAGCTTGATGCCTCCCGGCTTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp ATCACCTGGGTACTCCCAAAGAGAAAACCTGTGCTGAGAACGAGCTGGGCTGGGTGCTTTCTAGGTAAGTaGGGACTCCCCATCACAGCT +
Preference number: 4 (lower is better)
Translates to: ITWVLPKRKPVLRTSWAGCFLGK*GLPITA
Trigger: AGCTGTGATGGGGAGTCCCCACTTACCTAGAAAGCA...CCCAGCCCAGCTCGTTCTCAGCACAGGTTTTCTCTTTGGGAGTACCCAGGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp ACTGCGTTCTGCACATCACTGTTGCCTGGTTTAACTGCAAACTTTGCTATGAGTCGGCCCTATAAGCGCTaGGTGCCGCGGCTTCTTCCG +
Preference number: 4 (lower is better)
Translates to: TAFCTSLLPGLTANFAMSRPYKR*VPRLLP
Trigger: CGGAAGAAGCCGCGGCACCCAGCGCTTATAGGGCCG...ACTCATAGCAAAGTTTGCAGTTAAACCAGGCAACAGTGATGTGCAGAACGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR CCA 90 bp ACAGAACACGGACAAATTTGCCACGCTCACATCCTGAACAATACATTTTGTGAAACAGCCGCGCTGGCTTaGGAGGCTCTTCGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: TEHGQICHAHILNNTFCETAALA*EALRAA
Trigger: GGCCGCCCGAAGAGCCTCCCAAGCCAGCGCGGCTGT...TTCACAAAATGTATTGTTCAGGATGTGAGCGTGGCAAATTTGTCCGTGTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR CCA 90 bp ACAGAACACGGACAAATTTGCCACGCTCACATCCTGAACAATACATTTTGTGAACAGGCCGGGGCCTTCTaGGACCCCCAAGTGCCGTGC +
Preference number: 4 (lower is better)
Translates to: TEHGQICHAHILNNTFCEQAGAF*DPQVPC
Trigger: GCACGGCACTTGGGGGTCCCAGAAGGCCCCGGCCTG...TTCACAAAATGTATTGTTCAGGATGTGAGCGTGGCAAATTTGTCCGTGTTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR CCA 90 bp TGTGAACAGATGCCAGGCAGTAGTTACCAATCCAAGGTGAGGTGCTCAAGTTCAGACAGACCCTTCCCCTaGATCCCAACGCCCTTTCGG +
Preference number: 4 (lower is better)
Translates to: CEQMPGSSYQSKVRCSSSDRPFP*IPTPFR
Trigger: CCGAAAGGGCGTTGGGATCCAGGGGAAGGGTCTGTC...TGAACTTGAGCACCTCACCTTGGATTGGTAACTACTGCCTGGCATCTGTTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR CCA 90 bp GGGAAACCAGAATTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTCTGACAGGTGGGATGTaGGGCCTGAACAGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: GKPEFSRLELDTPDDAQGLTGGM*GLNSLE
Trigger: CTCCAGGCTGTTCAGGCCCCACATCCCACCTGTCAG...ACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAATTCTGGTTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR CCA 90 bp CTACAGACCAAACAGCTAAGCCGCAACACGATATGTGATGGTGCAGAGCTGTTCGTGACAGTCAGGACCTaGAGACACTCCTGGCCACCT +
Preference number: 4 (lower is better)
Translates to: LQTKQLSRNTICDGAELFVTVRT*RHSWPP
Trigger: AGGTGGCCAGGAGTGTCTCCAGGTCCTGACTGTCAC...GAACAGCTCTGCACCATCACATATCGTGTTGCGGCTTAGCTGTTTGGTCTGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR CAA 72 bp TCACTCGTGGCACCTTCTCCACCTTCTGATCCTCTCTaGGGTTACTGCCAAAGCCCACAGGTAAAGCACCTT +
Preference number: 4 (lower is better)
Translates to: SLVAPSPPSDPL*GYCQSPQVKHL
Trigger: AAGGTGCTTTACCTGTGGGCTTTGGCAGTAACCCAAGAGAGGATCAGAAGGTGGAGAAGGTGCCACGAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp GACAGAGAAAGGAACGGCTCTGGGAAAGCCAAACCTGGCCAAAGTCCAACTTCCATCTGCAAAGGCCGATaGCAAAGTCTGCTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: DRERNGSGKAKPGQSPTSICKGR*QSLLLL
Trigger: GAGAAGCAGCAGACTTTGTCATCGGCCTTTGCAGAT...GGAAGTTGGACTTTGGCCAGGTTTGGCTTTCCCAGAGCCGTTCCTTTCTCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp CTACAGACCAAACAGCTAAGCCGCAACACGATATGTGATGGTGCAGAGCTGTTCGTCGTCCTCAGGCAGTaGGGCCGCATAGTCAAAGTA +
Preference number: 4 (lower is better)
Translates to: LQTKQLSRNTICDGAELFVVLRQ*GRIVKV
Trigger: TACTTTGACTATGCGGCCTCACTGCCTGAGGACGAC...GAACAGCTCTGCACCATCACATATCGTGTTGCGGCTTAGCTGTTTGGTCTGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp GCACCTTCTCCACCTTCTGATCCTCTCTTGGGTTACTGCCAAAGCCCACAGGTATCTCCACAGCGACATTaGTGTGCATCACCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: APSPPSDPLLGYCQSPQVSPQRH*CASPSS
Trigger: TGAGGAAGGTGATGCACATCAATGTCGCTGTGGAGA...TACCTGTGGGCTTTGGCAGTAACCCAAGAGAGGATCAGAAGGTGGAGAAGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp TTAAGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCATCTCCACAGCGACATTaGTGTGCATCACCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: LRLLQWEAHCSHVLCGFPSPQRH*CASPSS
Trigger: TGAGGAAGGTGATGCACATCAATGTCGCTGTGGAGA...TGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp CACAGCTTTAGGGACACTGAAAAGGAATACTGTATCCACCAAACACACACACAGCGTCCGTGCTGGGCGTaGTCACACACTCCCCCTTGT +
Preference number: 4 (lower is better)
Translates to: HSFRDTEKEYCIHQTHTQRPCWA*SHTPPC
Trigger: ACAAGGGGGAGTGTGTGATCACGCCCAGCACGGACG...CTGTGTGTGTGTTTGGTGGATACAGTATTCCTTTTCAGTGTCCCTAAAGCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp AGTACTTCTAAAAAGCTCAACAGCCTTCCAGGATTGGAGAAGTCCCATAACCTGCCCCAGATCGGCGGCTaGAACTGTGTCTGCCCACTG +
Preference number: 4 (lower is better)
Translates to: STSKKLNSLPGLEKSHNLPQIGG*NCVCPL
Trigger: CAGTGGGCAGACACAGTTTCAGCCGCCGATCTGGGG...CAGGTTATGGGACTTCTCCAATCCTGGAAGGCTGTTGAGCTTTTTAGAAGTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp TGCAAAGCCGGGAGGCATCAAGCTCTAATTGTGGTGACCAGGCCCTCAGTCACATCAATTCACGTGCAATaGCGTCTTCGTGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: CKAGRHQALIVVTRPSVTSIHVQ*RLRASL
Trigger: CAGAGAAGCACGAAGACGTCATTGCACGTGAATTGA...TGTGACTGAGGGCCTGGTCACCACAATTAGAGCTTGATGCCTCCCGGCTTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp GCTACTCGCGCTGTCTCTGAGGCCCTCCTTTGCAGACATCATGACCGTAAGGCTCACCTTTATAGGTCCTaGATTTACGCAGGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: ATRAVSEALLCRHHDRKAHLYRS*IYAGLS
Trigger: AGACAGACCTGCGTAAATTCAGGACCTATAAAGGTG...AGCCTTACGGTCATGATGTCTGCAAAGGAGGGCCTCAGAGACAGCGCGAGTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433197.4
CDS-3UTR TCA 90 bp GCCGCAACACGATATGTGATGGTGCAGAGCTGTTCTGGCCTGAAAAGAACTTTCGCCAGCATGCATAGCTaGCCAGTCCCTAATGCCACA +
Preference number: 4 (lower is better)
Translates to: AATRYVMVQSCSGLKRTFASMHS*PVPNAT
Trigger: TGTGGCATTAGGGACTGGTCAGCTATGCATGCTGGC...GAAAGTTCTTTTCAGGCCAGAACAGCTCTGCACCATCACATATCGTGTTGCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp ACACCAGATGATGCCCAAGGTGTTTTCATGACAAGTACCCACACGAGATCTCTTAGGCCTGAGCTGCAATaGTCCCCCAACTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: TPDDAQGVFMTSTHTRSLRPELQ*SPNWLE
Trigger: CTCCAGCCAGTTGGGGGATCATTGCAGCTCAGGCCT...AAGAGATCTCGTGTGGGTACTTGTCATGAAAACACCTTGGGCATCATCTGGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp GCCGCAACACGATATGTGATGGTGCAGAGCTGTTCTGGCCTGAAAAGAACTTTCGTCTGGCCACGTTTCTaGACAACGCACAGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: AATRYVMVQSCSGLKRTFVWPRF*TTHSLA
Trigger: AGCAAGGCTGTGCGTTGTTCAGAAACGTGGCCAGAC...GAAAGTTCTTTTCAGGCCAGAACAGCTCTGCACCATCACATATCGTGTTGCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp TGCAAAGCCGGGAGGCATCAAGCTCTAATTGTGGTGACCAGGCCCTCAGTCACAAGAGCTGTTCTGGCCTaGAAAGAACTTTCCACTTGC +
Preference number: 4 (lower is better)
Translates to: CKAGRHQALIVVTRPSVTRAVLA*KELSTC
Trigger: GCAAGTGGAAAGTTCTTTTCAGGCCAGAACAGCTCT...TGTGACTGAGGGCCTGGTCACCACAATTAGAGCTTGATGCCTCCCGGCTTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp TTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTGTTTTCATGACAAGAACACGGCGGGAGTaGGAACACCTGCGCACCCAG +
Preference number: 4 (lower is better)
Translates to: FSRLELDTPDDAQGVFMTRTRRE*EHLRTQ
Trigger: CTGGGTGCGCAGGTGTTCTCACTCCCGCCGTGTTCT...TGTCATGAAAACACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp GCTACTCGCGCTGTCTCTGAGGCCCTCCTTTGCAGACATCATGACCGTAAGGCTAGAATGCAGAGTAGGTaGCTGGTAATGCTTTCTAGG +
Preference number: 4 (lower is better)
Translates to: ATRAVSEALLCRHHDRKARMQSR*LVMLSR
Trigger: CCTAGAAAGCATTACCAGTCACCTACTCTGCATTCT...AGCCTTACGGTCATGATGTCTGCAAAGGAGGGCCTCAGAGACAGCGCGAGTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp GCCGCAACACGATATGTGATGGTGCAGAGCTGTTCTGGCCTGAAAAGAACTTTCCACCCAGGTCAGAAATaGCCACCTAGAGCACGACAC +
Preference number: 4 (lower is better)
Translates to: AATRYVMVQSCSGLKRTFHPGQK*PPRARH
Trigger: GTGTCGTGCTCTAGGTGGTCATTTCTGACCTGGGTG...GAAAGTTCTTTTCAGGCCAGAACAGCTCTGCACCATCACATATCGTGTTGCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR TCA 90 bp AAGACTCAAGAAGCAACAAGAGAAATTCTGGCACACGTGCCCAAGAGAGGTTTAGAGGAGGCCTTGAAGTaGGCAAGGCCCAGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: KTQEATREILAHVPKRGLEEALK*ARPSQS
Trigger: GGACTGGCTGGGCCTTGCTCACTTCAAGGCCTCCTC...TAAACCTCTCTTGGGCACGTGTGCCAGAATTTCTCTTGTTGCTTCTTGAGTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR TCA 90 bp GAAAAGCCAATGTCCTCACACCAGCCACTAGGCCCTACACCAGTGGTATCCGTACCCTGGCCAACATGGTaGAACTCCATCTCTACTGAA +
Preference number: 4 (lower is better)
Translates to: EKPMSSHQPLGPTPVVSVPWPTW*NSISTE
Trigger: TTCAGTAGAGATGGAGTTTCACCATGTTGGCCAGGG...TACGGATACCACTGGTGTAGGGCCTAGTGGCTGGTGTGAGGACATTGGCTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR GCA 90 bp GCTACTCGCGCTGTCTCTGAGGCCCTCCTTTGCAGACATCATGACCGTAAGGCTGGCCTTCATTATTCTTaGTTCCAAGCGTATACAGGC +
Preference number: 4 (lower is better)
Translates to: ATRAVSEALLCRHHDRKAGLHYS*FQAYTG
Trigger: GCCTGTATACGCTTGGAAGCAAGAATAATGAAGGCC...AGCCTTACGGTCATGATGTCTGCAAAGGAGGGCCTCAGAGACAGCGCGAGTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp GCCGCAACACGATATGTGATGGTGCAGAGCTGTTCTGGCCTGAAAAGAACTTTCCGGATCACGTTCGGGTaGTCATCCGATTCTCGCAAC +
Preference number: 4 (lower is better)
Translates to: AATRYVMVQSCSGLKRTFRITFG*SSDSRN
Trigger: GTTGCGAGAATCGGATGAGCACCCGAACGTGATCCG...GAAAGTTCTTTTCAGGCCAGAACAGCTCTGCACCATCACATATCGTGTTGCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp TTAAGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCATGCGCAAAGTCCTTCTaGTCCACATACTCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: LRLLQWEAHCSHVLCGFPCAKSF*STYSCR
Trigger: CCTGCAAGAGTATGTGGAGCAGAAGGACTTTGCGCA...TGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp GACAGAGAAAGGAACGGCTCTGGGAAAGCCAAACCTGGCCAAAGTCCAACTTCCTGCCAAAAGGGTGGCTaGCCTCAGAGATTACGTAGT +
Preference number: 4 (lower is better)
Translates to: DRERNGSGKAKPGQSPTSCQKGG*PQRLRS
Trigger: ACTACGTAATCTCTGAGGGCAGCCACCCTTTTGGCA...GGAAGTTGGACTTTGGCCAGGTTTGGCTTTCCCAGAGCCGTTCCTTTCTCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp ACACCAGATGATGCCCAAGGTGTTTTCATGACAAGTACCCACACGAGATCTCTTAGGAGGATGTTGGCCTaGCGCTGCAGGGACTTGCCA +
Preference number: 4 (lower is better)
Translates to: TPDDAQGVFMTSTHTRSLRRMLA*RCRDLP
Trigger: TGGCAAGTCCCTGCAGCGGCAGGCCAACATCCTCCT...AAGAGATCTCGTGTGGGTACTTGTCATGAAAACACCTTGGGCATCATCTGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp TCTAGAGTTGGTGGGAAGAAACTCTGCTGGATCTACTCACCTGCAGATCTTCCAGCAAGCAGTCAAGGCTaGAGGCACCCAGGAGGATGT +
Preference number: 4 (lower is better)
Translates to: SRVGGKKLCWIYSPADLPASSQG*RHPGGC
Trigger: ACATCCTCCTGGGTGCCTGCAGCCTTGACTGCTTGC...TGGAAGATCTGCAGGTGAGTAGATCCAGCAGAGTTTCTTCCCACCAACTCTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp CGGCACCCTATATCCTGCCTAGCTCAATACACTAAGTGCTCAAATAAAATACATGGCCCGGTAGGTGTGTaGGAGGAGGTGGGGGAAGCG +
Preference number: 4 (lower is better)
Translates to: RHPISCLAQYTKCSNKIHGPVGV*EEVGEA
Trigger: CGCTTCCCCCACCTCCTCGCACACACCTACCGGGCC...ATGTATTTTATTTGAGCACTTAGTGTATTGAGCTAGGCAGGATATAGGGTGCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp GCACCTTCTCCACCTTCTGATCCTCTCTTGGGTTACTGCCAAAGCCCACAGGTATTCATTTCTGAGACCTaGAGACACAACCCCACCTGC +
Preference number: 4 (lower is better)
Translates to: APSPPSDPLLGYCQSPQVFISET*RHNPTC
Trigger: GCAGGTGGGGTTGTGTCTGCAGGTCTCAGAAATGAA...TACCTGTGGGCTTTGGCAGTAACCCAAGAGAGGATCAGAAGGTGGAGAAGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp TGTCCAACCTGGGAGGGTGGAATTTCGGCTCACCTGGAGAGGATGCCTGATGACGGAAAGCAGAAGTTTTaGCTGTCTTGTTCATCGCTG +
Preference number: 4 (lower is better)
Translates to: CPTWEGGISAHLERMPDDGKQKF*LSCSSL
Trigger: CAGCGATGAACAAGACAGGCAAAACTTCTGCTTTCC...GTCATCAGGCATCCTCTCCAGGTGAGCCGAAATTCCACCCTCCCAGGTTGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp TTTGCAGACATCATGACCGTAAGGCTTTTGGGGCCAGCATCTTCCCAGTTCCCTAGATCGAGACCATCCTaGCTAACATGGGGAAACCCC +
Preference number: 4 (lower is better)
Translates to: FADIMTVRLLGPASSQFPRSRPS*LTWGNP
Trigger: GGGGTTTCCCCATGTTAGGCAGGATGGTCTCGATCT...AGGGAACTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp CGTTTTGGATCTGGTAGCCTAAAGTCTCAACTCATAATGAGTCAATGTCTGGCTCCCTGCCGAGGGACCTaGCGCGTCAGACTTCATCGG +
Preference number: 4 (lower is better)
Translates to: RFGSGSLKSQLIMSQCLAPCRGT*RVRLHR
Trigger: CCGATGAAGTCTGACGCGGCAGGTCCCTCGGCAGGG...AGCCAGACATTGACTCATTATGAGTTGAGACTTTAGGCTACCAGATCCAAAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR GCA 90 bp TTTGCAGACATCATGACCGTAAGGCTTTTGGGGCCAGCATCTTCCCAGTTCCCTTTTACACACAGTGGCTaGATCAGACAGGGAGAGGGC +
Preference number: 4 (lower is better)
Translates to: FADIMTVRLLGPASSQFPFTHSG*IRQGEG
Trigger: GCCCTCTCCCTGTCTGATGCAGCCACTGTGTGTAAA...AGGGAACTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR GCA 90 bp ACACCAGATGATGCCCAAGGTGTTTTCATGACAAGTACCCACACGAGATCTCTTCCCCGTCATCTCGCCTaGTACCCTCACTCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: TPDDAQGVFMTSTHTRSLPRHLA*YPHSGG
Trigger: TCCTCCTGAGTGAGGGTAGCAGGCGAGATGACGGGG...AAGAGATCTCGTGTGGGTACTTGTCATGAAAACACCTTGGGCATCATCTGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR GCA 90 bp GTACAACCAAGGATTGCCCTGCATCTGCATGCCACTCTGATGTCCTGCCAGACAAGGGTGAAGATGCCCTaGCTGGGAACAATGAAACTG +
Preference number: 4 (lower is better)
Translates to: VQPRIALHLHATLMSCQTRVKMP*LGTMKL
Trigger: CAGTTTCATTGTTCCCAGGCAGGGCATCTTCACCCT...TGTCTGGCAGGACATCAGAGTGGCATGCAGATGCAGGGCAATCCTTGGTTGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR GCA 90 bp GTACAACCAAGGATTGCCCTGCATCTGCATGCCACTCTGATGTCCTGCCAGACATCTACAAGACTCCCTTaGCTCCTTGAGCTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: VQPRIALHLHATLMSCQTSTRLP*LLELLL
Trigger: GAGCAAGAGCTCAAGGAGGCAAGGGAGTCTTGTAGA...TGTCTGGCAGGACATCAGAGTGGCATGCAGATGCAGGGCAATCCTTGGTTGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR CCA 90 bp TCTAGAGTTGGTGGGAAGAAACTCTGCTGGATCTACTCACCTGCAGATCTTCCAGTGACGCCATCAGTCTaGGGCCCTTCCAGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: SRVGGKKLCWIYSPADLPVTPSV*GPSSKG
Trigger: TCCTTTGCTGGAAGGGCCCCAGACTGATGGCGTCAC...TGGAAGATCTGCAGGTGAGTAGATCCAGCAGAGTTTCTTCCCACCAACTCTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp AAGACTCAAGAAGCAACAAGAGAAATTCTGGCACACGTGCCCAAGAGAGGTTTAAGCCGTGTCTCCAGGTaGGTGGAAGGGCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: KTQEATREILAHVPKRGLSRVSR*VEGQLL
Trigger: CAGCAGCTGCCCTTCCACCCACCTGGAGACACGGCT...TAAACCTCTCTTGGGCACGTGTGCCAGAATTTCTCTTGTTGCTTCTTGAGTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp CGGCACCCTATATCCTGCCTAGCTCAATACACTAAGTGCTCAAATAAAATACATCCGGAGCAGAGCGAGTaGTTGGAGGCCCTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: RHPISCLAQYTKCSNKIHPEQSE*LEALGD
Trigger: GTCCCCCAGGGCCTCCAACCACTCGCTCTGCTCCGG...ATGTATTTTATTTGAGCACTTAGTGTATTGAGCTAGGCAGGATATAGGGTGCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp GACAGAGAAAGGAACGGCTCTGGGAAAGCCAAACCTGGCCAAAGTCCAACTTCCCTGCACACAGCTCGATaGCAATGTACTGGAATTGCC +
Preference number: 4 (lower is better)
Translates to: DRERNGSGKAKPGQSPTSLHTAR*QCTGIA
Trigger: GGCAATTCCAGTACATTGCCATCGAGCTGTGTGCAG...GGAAGTTGGACTTTGGCCAGGTTTGGCTTTCCCAGAGCCGTTCCTTTCTCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp TTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTGTTTTCATGACACACCCAGGAGGATGTTaGCCTGCCGCTGCAGGGACT +
Preference number: 4 (lower is better)
Translates to: FSRLELDTPDDAQGVFMTHPGGC*PAAAGT
Trigger: AGTCCCTGCAGCGGCAGGCCAACATCCTCCTGGGTG...TGTCATGAAAACACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp TTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTGTTTTCATGACAGCCCTCAGTCACAGCTaGGGCCACCAGAACAGAGGG +
Preference number: 4 (lower is better)
Translates to: FSRLELDTPDDAQGVFMTALSHS*GHQNRG
Trigger: CCCTCTGTTCTGGTGGCCCCAGCTGTGACTGAGGGC...TGTCATGAAAACACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp TCTGTGATCAATGAGAAATCTCACACTGCAGGACGACACCCTCTGAACTCCGTCTCAAGGCACTTGGTTTaGGAAGCCTGGTCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: SVINEKSHTAGRHPLNSVSRHLV*EAWSPC
Trigger: GCAGGGAGACCAGGCTTCCCAAACCAAGTGCCTTGA...GACGGAGTTCAGAGGGTGTCGTCCTGCAGTGTGAGATTTCTCATTGATCACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp TTTGCAGACATCATGACCGTAAGGCTTTTGGGGCCAGCATCTTCCCAGTTCCCTAGTTTATCCAGTAGATaGCTGGGGGTGCTACTCGCG +
Preference number: 4 (lower is better)
Translates to: FADIMTVRLLGPASSQFPSLSSR*LGVLLA
Trigger: CGCGAGTAGCACCCCCAGCCATCTACTGGATAAACT...AGGGAACTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp CCCAGTTCCCAGAGGATCACAAGGCCAAGGATCCAATGGGCACACCATGAGGACGCTGGAGAAAGTACATaGACAACATCTCCTTACACG +
Preference number: 4 (lower is better)
Translates to: PSSQRITRPRIQWAHHEDAGEST*TTSPYT
Trigger: CGTGTAAGGAGATGTTGTCCATGTACTTTCTCCAGC...GTCCTCATGGTGTGCCCATTGGATCCTTGGCCTTGTGATCCTCTGGGAACTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp CACAGCTTTAGGGACACTGAAAAGGAATACTGTATCCACCAAACACACACACAGGTGCTGAGAACGAGCTaGGCTGGGGGCACTCCCTGT +
Preference number: 4 (lower is better)
Translates to: HSFRDTEKEYCIHQTHTQVLRTS*AGGTPC
Trigger: ACAGGGAGTGCCCCCAGCCCAGCTCGTTCTCAGCAC...CTGTGTGTGTGTTTGGTGGATACAGTATTCCTTTTCAGTGTCCCTAAAGCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp GGTGATCACACCCAGGTCAGAAATGACCACCTAGAGCACGACACCATCACTCACTGGGAAAGCCAAACCTaGCCAAAGTCCAACTTCCTG +
Preference number: 4 (lower is better)
Translates to: GDHTQVRNDHLEHDTITHWESQT*PKSNFL
Trigger: CAGGAAGTTGGACTTTGGCCAGGTTTGGCTTTCCCA...GTGAGTGATGGTGTCGTGCTCTAGGTGGTCATTTCTGACCTGGGTGTGATCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR CCA 90 bp TTTGCAGACATCATGACCGTAAGGCTTTTGGGGCCAGCATCTTCCCAGTTCCCTAGAAAGGAACGGCTCTaGGAAAGCCAAACCTGGCCA +
Preference number: 4 (lower is better)
Translates to: FADIMTVRLLGPASSQFPRKERL*ESQTWP
Trigger: TGGCCAGGTTTGGCTTTCCCAGAGCCGTTCCTTTCT...AGGGAACTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp TCTGTGATCAATGAGAAATCTCACACTGCAGGACGACACCCTCTGAACTCCGTCTCCAACCTGGGAGGGTaGAATTTCGGCTCACCTGGA +
Preference number: 4 (lower is better)
Translates to: SVINEKSHTAGRHPLNSVSNLGG*NFGSPG
Trigger: TCCAGGTGAGCCGAAATTCCACCCTCCCAGGTTGGA...GACGGAGTTCAGAGGGTGTCGTCCTGCAGTGTGAGATTTCTCATTGATCACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp CTACAGACCAAACAGCTAAGCCGCAACACGATATGTGATGGTGCAGAGCTGTTCTTAAGGCTGCTCCAGTaGGAGGCTCACTGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: LQTKQLSRNTICDGAELFLRLLQ*EAHCSH
Trigger: GTGACTGCAGTGAGCCTCCCACTGGAGCAGCCTTAA...GAACAGCTCTGCACCATCACATATCGTGTTGCGGCTTAGCTGTTTGGTCTGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp TGTGAACAGATGCCAGGCAGTAGTTACCAATCCAAGGTGAGGTGCTCAAGTTCAAGCCTCCCCAGTAGCTaGGATTACAGGCCTGCGCTA +
Preference number: 4 (lower is better)
Translates to: CEQMPGSSYQSKVRCSSSSLPSS*DYRPAL
Trigger: TAGCGCAGGCCTGTAATCCCAGCTACTGGGGAGGCT...TGAACTTGAGCACCTCACCTTGGATTGGTAACTACTGCCTGGCATCTGTTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR CCA 90 bp CCCAGTTCCCAGAGGATCACAAGGCCAAGGATCCAATGGGCACACCATGAGGACTCCACGTTTACTTTTTaGAAAGGCGGCAGCGACTTT +
Preference number: 4 (lower is better)
Translates to: PSSQRITRPRIQWAHHEDSTFTF*KGGSDF
Trigger: AAAGTCGCTGCCGCCTTTCCAAAAAGTAAACGTGGA...GTCCTCATGGTGTGCCCATTGGATCCTTGGCCTTGTGATCCTCTGGGAACTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR CCA 90 bp GCCGCAACACGATATGTGATGGTGCAGAGCTGTTCTGGCCTGAAAAGAACTTTCCTCAAACCTGACAGGTaGGATGTGGGGCCTGAACAG +
Preference number: 4 (lower is better)
Translates to: AATRYVMVQSCSGLKRTFLKPDR*DVGPEQ
Trigger: CTGTTCAGGCCCCACATCCCACCTGTCAGGTTTGAG...GAAAGTTCTTTTCAGGCCAGAACAGCTCTGCACCATCACATATCGTGTTGCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR CCA 90 bp TGCAAAGCCGGGAGGCATCAAGCTCTAATTGTGGTGACCAGGCCCTCAGTCACACATGTTTACACACAGTaGCTGCATCAGACAGGGAGA +
Preference number: 4 (lower is better)
Translates to: CKAGRHQALIVVTRPSVTHVYTQ*LHQTGR
Trigger: TCTCCCTGTCTGATGCAGCCACTGTGTGTAAACATG...TGTGACTGAGGGCCTGGTCACCACAATTAGAGCTTGATGCCTCCCGGCTTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR TCA 90 bp CCCTCCTTTGCAGACATCATGACCGTAAGGCTTTTGGGGCCAGCATCTTCCCAGCATTGGGCATGGATATaGGGATGTTGTGTGGCTTTA +
Preference number: 4 (lower is better)
Translates to: PSFADIMTVRLLGPASSQHWAWI*GCCVAL
Trigger: TAAAGCCACACAACATCCTCATATCCATGCCCAATG...CTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAAGGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp GGGAAACCAGAATTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTGCTGAGGGGCGTTTCTaGGGATCCATCGCAATCATC +
Preference number: 4 (lower is better)
Translates to: GKPEFSRLELDTPDDAQGAEGRF*GSIAII
Trigger: GATGATTGCGATGGATCCTCAGAAACGCCCCTCAGC...ACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAATTCTGGTTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp CCCAGTTCCCAGAGGATCACAAGGCCAAGGATCCAATGGGCACACCATGAGGACAGAATGTTCTATACATaGACACTCTTGAGGGGATGG +
Preference number: 4 (lower is better)
Translates to: PSSQRITRPRIQWAHHEDRMFYT*TLLRGW
Trigger: CCATCCCCTCAAGAGTGTTCATGTATAGAACATTCT...GTCCTCATGGTGTGCCCATTGGATCCTTGGCCTTGTGATCCTCTGGGAACTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp GCACCTTCTCCACCTTCTGATCCTCTCTTGGGTTACTGCCAAAGCCCACAGGTAAGAGCTGTTCTGGCCTaGAAAGAACTTTCCACTTGC +
Preference number: 4 (lower is better)
Translates to: APSPPSDPLLGYCQSPQVRAVLA*KELSTC
Trigger: GCAAGTGGAAAGTTCTTTTCAGGCCAGAACAGCTCT...TACCTGTGGGCTTTGGCAGTAACCCAAGAGAGGATCAGAAGGTGGAGAAGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp TCTGTGATCAATGAGAAATCTCACACTGCAGGACGACACCCTCTGAACTCCGTCCCGCAACACGATATGTaGTGGTGCAGAGCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: SVINEKSHTAGRHPLNSVPQHDM*WCRAVL
Trigger: CAGAACAGCTCTGCACCATCACATATCGTGTTGCGG...GACGGAGTTCAGAGGGTGTCGTCCTGCAGTGTGAGATTTCTCATTGATCACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp ATCACCTGGGTACTCCCAAAGAGAAAACCTGTGCTGAGAACGAGCTGGGCTGGGATTGGGTTTAAAAGATaGTGTCCAACCTGGGAGGGT +
Preference number: 4 (lower is better)
Translates to: ITWVLPKRKPVLRTSWAGIGFKR*CPTWEG
Trigger: ACCCTCCCAGGTTGGACATCATCTTTTAAACCCAAT...CCCAGCCCAGCTCGTTCTCAGCACAGGTTTTCTCTTTGGGAGTACCCAGGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp TGCAAAGCCGGGAGGCATCAAGCTCTAATTGTGGTGACCAGGCCCTCAGTCACACACAAGGTTTACATCTaGGAATGCAGAGTAGGTGAC +
Preference number: 4 (lower is better)
Translates to: CKAGRHQALIVVTRPSVTHKVYI*ECRVGD
Trigger: GTCACCTACTCTGCATTCTCAGATGTAAACCTTGTG...TGTGACTGAGGGCCTGGTCACCACAATTAGAGCTTGATGCCTCCCGGCTTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp GGATTCTTTCACCTGAAAAACGGAGTCCAAATCTGGGGCAGGCAAATAATGAAAGGCTGGCTTCGCTCATaGGGCGTCGGCGGCTGTAAA +
Preference number: 4 (lower is better)
Translates to: GFFHLKNGVQIWGRQIMKGWLRS*GVGGCK
Trigger: TTTACAGCCGCCGACGCCTCATGAGCGAAGCCAGCC...TTTCATTATTTGCCTGCCCCAGATTTGGACTCCGTTTTTCAGGTGAAAGAATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR TCA 90 bp CGGCACCCTATATCCTGCCTAGCTCAATACACTAAGTGCTCAAATAAAATACATGTGGGATGTGGGGCCTaGACAGCCTGGAGCGGCCAT +
Preference number: 4 (lower is better)
Translates to: RHPISCLAQYTKCSNKIHVGCGA*TAWSGH
Trigger: ATGGCCGCTCCAGGCTGTTCAGGCCCCACATCCCAC...ATGTATTTTATTTGAGCACTTAGTGTATTGAGCTAGGCAGGATATAGGGTGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR TCA 90 bp AAGACTCAAGAAGCAACAAGAGAAATTCTGGCACACGTGCCCAAGAGAGGTTTAAGGGTGGTATCCCCCTaGACCCCACCTGGTGATCAC +
Preference number: 4 (lower is better)
Translates to: KTQEATREILAHVPKRGLRVVSP*TPPGDH
Trigger: GTGATCACCAGGTGGGGTTCAGGGGGATACCACCCT...TAAACCTCTCTTGGGCACGTGTGCCAGAATTTCTCTTGTTGCTTCTTGAGTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR TCA 90 bp CCCAGTTCCCAGAGGATCACAAGGCCAAGGATCCAATGGGCACACCATGAGGACCACCTTTATAGGTCCTaGATTTACGCAGGTCTAGAA +
Preference number: 4 (lower is better)
Translates to: PSSQRITRPRIQWAHHEDHLYRS*IYAGLE
Trigger: TTCTAGACCTGCGTAAATTCAGGACCTATAAAGGTG...GTCCTCATGGTGTGCCCATTGGATCCTTGGCCTTGTGATCCTCTGGGAACTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR TCA 90 bp AAAAGGGTTTGCCTGTTTTGTTCACTTGCTGTATCCTCAGGACCTAGAGTAGCATGGCCCATCTCTCTCTaGGCTGATCTCCTCCCGCCA +
Preference number: 4 (lower is better)
Translates to: KRVCLFCSLAVSSGPRVAWPISL*ADLLPP
Trigger: TGGCGGGAGGAGATCAGCTCAGAGAGAGATGGGCCA...TGCTACTCTAGGTCCTGAGGATACAGCAAGTGAACAAAACAGGCAAACCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR TCA 90 bp AAAAGGGTTTGCCTGTTTTGTTCACTTGCTGTATCCTCAGGACCTAGAGTAGCACCCTCCTGCCCTGTATaGCTGGCCCATCTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: KRVCLFCSLAVSSGPRVAPSCPV*LAHLSL
Trigger: CAGAGAGAGATGGGCCAGTCATACAGGGCAGGAGGG...TGCTACTCTAGGTCCTGAGGATACAGCAAGTGAACAAAACAGGCAAACCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR GCA 90 bp CCCTCCTTTGCAGACATCATGACCGTAAGGCTTTTGGGGCCAGCATCTTCCCAGGGCCTTCATTATTCTTaGTTCCAAGCGTATACAGGC +
Preference number: 4 (lower is better)
Translates to: PSFADIMTVRLLGPASSQGLHYS*FQAYTG
Trigger: GCCTGTATACGCTTGGAAGCAAGAATAATGAAGGCC...CTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAAGGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp AGTACTTCTAAAAAGCTCAACAGCCTTCCAGGATTGGAGAAGTCCCATAACCTGGCAAAGGAAGTGTGCTaGCGCGGGGCACGACAGCAA +
Preference number: 4 (lower is better)
Translates to: STSKKLNSLPGLEKSHNLAKEVC*RGARQQ
Trigger: TTGCTGTCGTGCCCCGCGGCAGCACACTTCCTTTGC...CAGGTTATGGGACTTCTCCAATCCTGGAAGGCTGTTGAGCTTTTTAGAAGTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp AACACCCTTTCATCATGCAAGGAAGAGACAGAATGTGAGTGTTGGTTTTTGGTAGTTCCAGGGAGGGGCTaGTGCCAGCCTTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: NTLSSCKEETECECWFLVVPGRG*CQPWRQ
Trigger: CTGCCTCCAAGGCTGGCAGCAGCCCCTCCCTGGAAC...TACCAAAAACCAACACTCACATTCTGTCTCTTCCTTGCATGATGAAAGGGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR GCA 90 bp TTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTGTTTTCATGACAGGCTCCAGGCCGAGATaGGCAAAGTCCTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: FSRLELDTPDDAQGVFMTGSRPR*AKSFCS
Trigger: GGAGCAGAAGGACTTTGCGCATCTCGGCCTGGAGCC...TGTCATGAAAACACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp CACAGCTTTAGGGACACTGAAAAGGAATACTGTATCCACCAAACACACACACAGGGCTCCAGGCCGAGATaGGCAAAGTCCTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: HSFRDTEKEYCIHQTHTQGSRPR*AKSFCS
Trigger: GGAGCAGAAGGACTTTGCGCATCTCGGCCTGGAGCC...CTGTGTGTGTGTTTGGTGGATACAGTATTCCTTTTCAGTGTCCCTAAAGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp TTAAGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCACTTGATCTTGCCGTGTaGATTGGGCATGGATATGAG +
Preference number: 4 (lower is better)
Translates to: LRLLQWEAHCSHVLCGFPLDLAV*IGHGYE
Trigger: CTCATATCCATGCCCAATGCACACGGCAAGATCAAG...TGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp TCTAGAGTTGGTGGGAAGAAACTCTGCTGGATCTACTCACCTGCAGATCTTCCACCACTGCCAGCTTCTTaGAGAGGCCAAAGTCGGAGA +
Preference number: 4 (lower is better)
Translates to: SRVGGKKLCWIYSPADLPPLPAS*RGQSRR
Trigger: TCTCCGACTTTGGCCTCTGCAAGAAGCTGGCAGTGG...TGGAAGATCTGCAGGTGAGTAGATCCAGCAGAGTTTCTTCCCACCAACTCTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp AGTACTTCTAAAAAGCTCAACAGCCTTCCAGGATTGGAGAAGTCCCATAACCTGAGGAGGATGTTGGCCTaGCGCTGCAGGGACTTGCCA +
Preference number: 4 (lower is better)
Translates to: STSKKLNSLPGLEKSHNLRRMLA*RCRDLP
Trigger: TGGCAAGTCCCTGCAGCGGCAGGCCAACATCCTCCT...CAGGTTATGGGACTTCTCCAATCCTGGAAGGCTGTTGAGCTTTTTAGAAGTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp ACACCAGATGATGCCCAAGGTGTTTTCATGACAAGTACCCACACGAGATCTCTTGCAAGCAGTCAAGGCTaGAGGCACCCAGGAGGATGT +
Preference number: 4 (lower is better)
Translates to: TPDDAQGVFMTSTHTRSLASSQG*RHPGGC
Trigger: ACATCCTCCTGGGTGCCTGCAGCCTTGACTGCTTGC...AAGAGATCTCGTGTGGGTACTTGTCATGAAAACACCTTGGGCATCATCTGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp AAGACTCAAGAAGCAACAAGAGAAATTCTGGCACACGTGCCCAAGAGAGGTTTACTGTCCTCTGTGGGCTaGAGAGCAGGCAGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: KTQEATREILAHVPKRGLLSSVG*RAGSSR
Trigger: CCTTGAGCTGCCTGCTCTGCAGCCCACAGAGGACAG...TAAACCTCTCTTGGGCACGTGTGCCAGAATTTCTCTTGTTGCTTCTTGAGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp GGGAAACCAGAATTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTGGGAGTGAGAACACCTaGGCACCCAGGATTTCACAC +
Preference number: 4 (lower is better)
Translates to: GKPEFSRLELDTPDDAQGGSENT*APRISH
Trigger: GTGTGAAATCCTGGGTGCGCAGGTGTTCTCACTCCC...ACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAATTCTGGTTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp CCCTCCTTTGCAGACATCATGACCGTAAGGCTTTTGGGGCCAGCATCTTCCCAGTGGCTCGACATAAGATaGCGCCATCAGCAGAATTAT +
Preference number: 4 (lower is better)
Translates to: PSFADIMTVRLLGPASSQWLDIR*RHQQNY
Trigger: ATAATTCTGCTGATGGCGGCATCTTATGTCGAGCCA...CTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAAGGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp ACCCATGCGGGATCTTCCAAGAGTGCAATTCCCACAGCTCCACTTGCTCAAGGAGAACACGGACAAATTTaGCACGCTCACATCCTGAAC +
Preference number: 4 (lower is better)
Translates to: THAGSSKSAIPTAPLAQGEHGQI*HAHILN
Trigger: GTTCAGGATGTGAGCGTGGCAAATTTGTCCGTGTTC...TCCTTGAGCAAGTGGAGCTGTGGGAATTGCACTCTTGGAAGATCCCGCATGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR GCA 90 bp ACCTCGAACCCATGCGGGATCTTCCAAGAGTGCAATTCCCACAGCTCCACTTGCCAATCCAAGGTGAGGTaGTCAAGTTCAAAACCTGAC +
Preference number: 4 (lower is better)
Translates to: TSNPCGIFQECNSHSSTCQSKVR*SSSKPD
Trigger: GTCAGGTTTTGAACTTGAGCACCTCACCTTGGATTG...GCAAGTGGAGCTGTGGGAATTGCACTCTTGGAAGATCCCGCATGGGTTCGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR GCA 90 bp CACAGCTTTAGGGACACTGAAAAGGAATACTGTATCCACCAAACACACACACAGGGCGGCAGCGACTTTTaGAACCTGCCCTCTCACACG +
Preference number: 4 (lower is better)
Translates to: HSFRDTEKEYCIHQTHTQGGSDF*NLPSHT
Trigger: CGTGTGAGAGGGCAGGTTGCAAAAGTCGCTGCCGCC...CTGTGTGTGTGTTTGGTGGATACAGTATTCCTTTTCAGTGTCCCTAAAGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR CCA 90 bp AATAAGACACACACTGAAAGAAAATCACAGTATTGCCTCCAATGCAATAGTTACGCGAGGACTCGGCCCTaGCTCCGGGGGCGGTACGGA +
Preference number: 4 (lower is better)
Translates to: NKTHTERKSQYCLQCNSYARTRP*LRGRYG
Trigger: TCCGTACCGCCCCCGGAGCCAGGGCCGAGTCCTCGC...GTAACTATTGCATTGGAGGCAATACTGTGATTTTCTTTCAGTGTGTGTCTTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR CCA 90 bp GGTGATCACACCCAGGTCAGAAATGACCACCTAGAGCACGACACCATCACTCACCAACTATCACCACGCTaGTTTCCTCATCTCCATCGT +
Preference number: 4 (lower is better)
Translates to: GDHTQVRNDHLEHDTITHQLSPR*FPHLHR
Trigger: ACGATGGAGATGAGGAAACCAGCGTGGTGATAGTTG...GTGAGTGATGGTGTCGTGCTCTAGGTGGTCATTTCTGACCTGGGTGTGATCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR CCA 90 bp GGGAAACCAGAATTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTCTGTCGCTCACGTCCTaGAAGAACTGGAGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: GKPEFSRLELDTPDDAQGLSLTS*KNWSCF
Trigger: GAAGCAGCTCCAGTTCTTCCAGGACGTGAGCGACAG...ACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAATTCTGGTTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp ACACCAGATGATGCCCAAGGTGTTTTCATGACAAGTACCCACACGAGATCTCTTGTGTGTGCGAGGAGGTaGGGGAAGCGAGATGTGAAG +
Preference number: 4 (lower is better)
Translates to: TPDDAQGVFMTSTHTRSLVCARR*GKRDVK
Trigger: CTTCACATCTCGCTTCCCCCACCTCCTCGCACACAC...AAGAGATCTCGTGTGGGTACTTGTCATGAAAACACCTTGGGCATCATCTGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp TTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTGTTTTCATGACACAGCACTGTCCTCTGTaGGCTGCAGAGCAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: FSRLELDTPDDAQGVFMTQHCPL*AAEQAA
Trigger: AGCTGCCTGCTCTGCAGCCCACAGAGGACAGTGCTG...TGTCATGAAAACACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp TTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTGTTTTCATGACACACCTTGCAGCCGTATaGGGAGCTCTGTCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: FSRLELDTPDDAQGVFMTHLAAV*GALSQA
Trigger: GGCCTGAGACAGAGCTCCCCATACGGCTGCAAGGTG...TGTCATGAAAACACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp AAGACTCAAGAAGCAACAAGAGAAATTCTGGCACACGTGCCCAAGAGAGGTTTACACCTTGCAGCCGTATaGGGAGCTCTGTCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: KTQEATREILAHVPKRGLHLAAV*GALSQA
Trigger: GGCCTGAGACAGAGCTCCCCATACGGCTGCAAGGTG...TAAACCTCTCTTGGGCACGTGTGCCAGAATTTCTCTTGTTGCTTCTTGAGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp GACAGAGAAAGGAACGGCTCTGGGAAAGCCAAACCTGGCCAAAGTCCAACTTCCCAACAAGAGAAATTCTaGCACACGTGCCCAAGAGAG +
Preference number: 4 (lower is better)
Translates to: DRERNGSGKAKPGQSPTSQQEKF*HTCPRE
Trigger: CTCTCTTGGGCACGTGTGCCAGAATTTCTCTTGTTG...GGAAGTTGGACTTTGGCCAGGTTTGGCTTTCCCAGAGCCGTTCCTTTCTCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp GGGAAACCAGAATTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTCTGCAAAAGTGGAACTaGCCCCCAGTTCCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: GKPEFSRLELDTPDDAQGLQKWN*PPVPRG
Trigger: TCCTCTGGGAACTGGGGGCCAGTTCCACTTTTGCAG...ACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAATTCTGGTTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp GGGAAACCAGAATTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTAGAAGGCTGCAAAAGTaGAACTGGCCCCCAGTTCCC +
Preference number: 4 (lower is better)
Translates to: GKPEFSRLELDTPDDAQGRRLQK*NWPPVP
Trigger: GGGAACTGGGGGCCAGTTCCACTTTTGCAGCCTTCT...ACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAATTCTGGTTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp TGCAAAGCCGGGAGGCATCAAGCTCTAATTGTGGTGACCAGGCCCTCAGTCACACAGTCACGTTCTTTGTaGCTTTCCAACGTCTACAGA +
Preference number: 4 (lower is better)
Translates to: CKAGRHQALIVVTRPSVTQSRSL*LSNVYR
Trigger: TCTGTAGACGTTGGAAAGCCACAAAGAACGTGACTG...TGTGACTGAGGGCCTGGTCACCACAATTAGAGCTTGATGCCTCCCGGCTTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp GAACCTGTAATAAAACACTCTACAGTCTTCCTGTGGCCACACACTCCTGAGAGACTGTGGATGGGTCTGTaGCCTGTTAGGAACTGGGCC +
Preference number: 4 (lower is better)
Translates to: EPVIKHSTVFLWPHTPERLWMGL*PVRNWA
Trigger: GGCCCAGTTCCTAACAGGCCACAGACCCATCCACAG...TCTCTCAGGAGTGTGTGGCCACAGGAAGACTGTAGAGTGTTTTATTACAGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR CCA 90 bp GAAAAGCCAATGTCCTCACACCAGCCACTAGGCCCTACACCAGTGGTATCCGTAATGACACCTTCTCCGTaGAGCCCTCCCTGTTTAAAA +
Preference number: 4 (lower is better)
Translates to: EKPMSSHQPLGPTPVVSVMTPSP*SPPCLK
Trigger: TTTTAAACAGGGAGGGCTCCACGGAGAAGGTGTCAT...TACGGATACCACTGGTGTAGGGCCTAGTGGCTGGTGTGAGGACATTGGCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR CCA 90 bp CCCTCCAAATGGATGTGGGCTCACAGCACATTACTAGTCCCTCTCATGAGTGGTCATGTCCTCACATGGTaGAGAGAGAATGAGCGAGCT +
Preference number: 4 (lower is better)
Translates to: PSKWMWAHSTLLVPLMSGHVLTW*RENERA
Trigger: AGCTCGCTCATTCTCTCTCCACCATGTGAGGACATG...ACCACTCATGAGAGGGACTAGTAATGTGCTGTGAGCCCACATCCATTTGGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR TCA 90 bp GAAAAGCCAATGTCCTCACACCAGCCACTAGGCCCTACACCAGTGGTATCCGTAACTTCCATCCAGCGTTaGCACAAACAACAAGGTTTC +
Preference number: 4 (lower is better)
Translates to: EKPMSSHQPLGPTPVVSVTSIQR*HKQQGF
Trigger: GAAACCTTGTTGTTTGTGTCAACGCTGGATGGAAGT...TACGGATACCACTGGTGTAGGGCCTAGTGGCTGGTGTGAGGACATTGGCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR TCA 90 bp CTACAGACCAAACAGCTAAGCCGCAACACGATATGTGATGGTGCAGAGCTGTTCATCTGCAAAGGCCGATaGCAAAGTCTGCTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: LQTKQLSRNTICDGAELFICKGR*QSLLLL
Trigger: GAGAAGCAGCAGACTTTGTCATCGGCCTTTGCAGAT...GAACAGCTCTGCACCATCACATATCGTGTTGCGGCTTAGCTGTTTGGTCTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp CCAGCATCTTCCCAGTTCCCTGTAGGTCACGAGGGGCCACTTCTCCCACTTCCTAAAGCTCTTTTTCTCTaGATCAGCAGGAATCACATT +
Preference number: 4 (lower is better)
Translates to: PASSQFPVGHEGPLLPLPKALFL*ISRNHI
Trigger: AATGTGATTCCTGCTGATTCAGAGAAAAAGAGCTTT...AGGAAGTGGGAGAAGTGGCCCCTCGTGACCTACAGGGAACTGGGAAGATGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp AAGACTCAAGAAGCAACAAGAGAAATTCTGGCACACGTGCCCAAGAGAGGTTTACTCTGTGAACGATGTTaGGGGAGTGGAGGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: KTQEATREILAHVPKRGLLCERC*GSGGGP
Trigger: TGGCCCACCTCCACTCCCTCAACATCGTTCACAGAG...TAAACCTCTCTTGGGCACGTGTGCCAGAATTTCTCTTGTTGCTTCTTGAGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp TCTAGAGTTGGTGGGAAGAAACTCTGCTGGATCTACTCACCTGCAGATCTTCCAAGAAGAACGGGTGTTTaGGCACATGCTTCGCTGAGG +
Preference number: 4 (lower is better)
Translates to: SRVGGKKLCWIYSPADLPRRTGV*AHASLR
Trigger: CCTCAGCGAAGCATGTGCTCAAACACCCGTTCTTCT...TGGAAGATCTGCAGGTGAGTAGATCCAGCAGAGTTTCTTCCCACCAACTCTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp TCTGTGATCAATGAGAAATCTCACACTGCAGGACGACACCCTCTGAACTCCGTCCTCGGAGGAGATCTCTaGCAGAACCACCTTTATAGG +
Preference number: 4 (lower is better)
Translates to: SVINEKSHTAGRHPLNSVLGGDL*QNHLYR
Trigger: CCTATAAAGGTGGTTCTGTCAGAGATCTCCTCCGAG...GACGGAGTTCAGAGGGTGTCGTCCTGCAGTGTGAGATTTCTCATTGATCACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp TGCAAAGCCGGGAGGCATCAAGCTCTAATTGTGGTGACCAGGCCCTCAGTCACACTCTTGAGGGGATGGTaGTTTTTGGTACCACAAAAA +
Preference number: 4 (lower is better)
Translates to: CKAGRHQALIVVTRPSVTLLRGW*FLVPQK
Trigger: TTTTTGTGGTACCAAAAATCACCATCCCCTCAAGAG...TGTGACTGAGGGCCTGGTCACCACAATTAGAGCTTGATGCCTCCCGGCTTTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp CCCTCCTTTGCAGACATCATGACCGTAAGGCTTTTGGGGCCAGCATCTTCCCAGGCTAAAACAGGGAGATaGCACAAAATTGGGTCACTA +
Preference number: 4 (lower is better)
Translates to: PSFADIMTVRLLGPASSQAKTGR*HKIGSL
Trigger: TAGTGACCCAATTTTGTGTCATCTCCCTGTTTTAGC...CTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAAGGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp TCTAGAGTTGGTGGGAAGAAACTCTGCTGGATCTACTCACCTGCAGATCTTCCACGGACCAGATCCCTGTaGTTCTGGGACAGAAGAGAT +
Preference number: 4 (lower is better)
Translates to: SRVGGKKLCWIYSPADLPRTRSL*FWDRRD
Trigger: ATCTCTTCTGTCCCAGAATCACAGGGATCTGGTCCG...TGGAAGATCTGCAGGTGAGTAGATCCAGCAGAGTTTCTTCCCACCAACTCTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp TCTGTGATCAATGAGAAATCTCACACTGCAGGACGACACCCTCTGAACTCCGTCGAACTTTCCACTTGCTaGGCACAGTGGGAAACCAGA +
Preference number: 4 (lower is better)
Translates to: SVINEKSHTAGRHPLNSVELSTC*AQWETR
Trigger: TCTGGTTTCCCACTGTGCTCAGCAAGTGGAAAGTTC...GACGGAGTTCAGAGGGTGTCGTCCTGCAGTGTGAGATTTCTCATTGATCACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp GCTACTCGCGCTGTCTCTGAGGCCCTCCTTTGCAGACATCATGACCGTAAGGCTATTGCCAAAGATAACTaGATCGCATGCACACAAAAC +
Preference number: 4 (lower is better)
Translates to: ATRAVSEALLCRHHDRKAIAKDN*IACTQN
Trigger: GTTTTGTGTGCATGCGATTCAGTTATCTTTGGCAAT...AGCCTTACGGTCATGATGTCTGCAAAGGAGGGCCTCAGAGACAGCGCGAGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp ACAGAACACGGACAAATTTGCCACGCTCACATCCTGAACAATACATTTTGTGAACCTCCCAGGTTCGGGTaGTTCTCCTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: TEHGQICHAHILNNTFCEPPRFG*FSCLSL
Trigger: GAGGCTGAGGCAGGAGAATCACCCGAACCTGGGAGG...TTCACAAAATGTATTGTTCAGGATGTGAGCGTGGCAAATTTGTCCGTGTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR TCA 90 bp CGGCACCCTATATCCTGCCTAGCTCAATACACTAAGTGCTCAAATAAAATACATAGCGACCAGAGACCATaGGGGACATGGGCCGCAGAG +
Preference number: 4 (lower is better)
Translates to: RHPISCLAQYTKCSNKIHSDQRP*GTWAAE
Trigger: CTCTGCGGCCCATGTCCCTCATGGTCTCTGGTCGCT...ATGTATTTTATTTGAGCACTTAGTGTATTGAGCTAGGCAGGATATAGGGTGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR TCA 90 bp CCCTCCAAATGGATGTGGGCTCACAGCACATTACTAGTCCCTCTCATGAGTGGTTCCAGGCCTCACTCCTaGCTGAACTCAATTCATTCA +
Preference number: 4 (lower is better)
Translates to: PSKWMWAHSTLLVPLMSGSRPHS*LNSIHS
Trigger: TGAATGAATTGAGTTCAGTCAGGAGTGAGGCCTGGA...ACCACTCATGAGAGGGACTAGTAATGTGCTGTGAGCCCACATCCATTTGGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR TCA 90 bp GAACCTGTAATAAAACACTCTACAGTCTTCCTGTGGCCACACACTCCTGAGAGATTGAGGCCAGGAGTTTaGGACCACCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: EPVIKHSTVFLWPHTPERLRPGV*DHPGQH
Trigger: ATGTTGGCCAGGGTGGTCTCAAACTCCTGGCCTCAA...TCTCTCAGGAGTGTGTGGCCACAGGAAGACTGTAGAGTGTTTTATTACAGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR GCA 90 bp ACACCAGATGATGCCCAAGGTGTTTTCATGACAAGTACCCACACGAGATCTCTTCGGCATGGGGATGCCTaGACCAATTCTGGGATGGTA +
Preference number: 4 (lower is better)
Translates to: TPDDAQGVFMTSTHTRSLRHGDA*TNSGMV
Trigger: TACCATCCCAGAATTGGTGCAGGCATCCCCATGCCG...AAGAGATCTCGTGTGGGTACTTGTCATGAAAACACCTTGGGCATCATCTGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp CGGCACCCTATATCCTGCCTAGCTCAATACACTAAGTGCTCAAATAAAATACATTGCTGGGGCTGCTGGTaGCCGAGCTCTCTGAGTACG +
Preference number: 4 (lower is better)
Translates to: RHPISCLAQYTKCSNKIHCWGCW*PSSLST
Trigger: CGTACTCAGAGAGCTCGGGCACCAGCAGCCCCAGCA...ATGTATTTTATTTGAGCACTTAGTGTATTGAGCTAGGCAGGATATAGGGTGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp TTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTGTTTTCATGACACCCGGTACACAATTGTaGCCTCAGCTCCATGGCCCA +
Preference number: 4 (lower is better)
Translates to: FSRLELDTPDDAQGVFMTPGTQL*PQLHGP
Trigger: TGGGCCATGGAGCTGAGGGCACAATTGTGTACCGGG...TGTCATGAAAACACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp TTTGCAGACATCATGACCGTAAGGCTTTTGGGGCCAGCATCTTCCCAGTTCCCTCTTGATCTTGCCGTGTaGATTGGGCATGGATATGAG +
Preference number: 4 (lower is better)
Translates to: FADIMTVRLLGPASSQFPLDLAV*IGHGYE
Trigger: CTCATATCCATGCCCAATGCACACGGCAAGATCAAG...AGGGAACTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp AGCTCGGGAAATGTTGGCAAAACACCCTTTCATCATGCAAGGAAGAGACAGAATATGTTGGCCTGCCGCTaGAGGGACTTGCCAAAAGGG +
Preference number: 4 (lower is better)
Translates to: SSGNVGKTPFHHARKRQNMLACR*RDLPKG
Trigger: CCCTTTTGGCAAGTCCCTGCAGCGGCAGGCCAACAT...ATTCTGTCTCTTCCTTGCATGATGAAAGGGTGTTTTGCCAACATTTCCCGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR GCA 90 bp TCTGTGATCAATGAGAAATCTCACACTGCAGGACGACACCCTCTGAACTCCGTCTGGAAGAACTGGAGCTaGTTCTCTAGGCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: SVINEKSHTAGRHPLNSVWKNWS*FSRLQK
Trigger: CTTCTGGAGCCTAGAGAAGCAGCTCCAGTTCTTCCA...GACGGAGTTCAGAGGGTGTCGTCCTGCAGTGTGAGATTTCTCATTGATCACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp CTACAGACCAAACAGCTAAGCCGCAACACGATATGTGATGGTGCAGAGCTGTTCTGGAAGAACTGGAGCTaGTTCTCTAGGCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: LQTKQLSRNTICDGAELFWKNWS*FSRLQK
Trigger: CTTCTGGAGCCTAGAGAAGCAGCTCCAGTTCTTCCA...GAACAGCTCTGCACCATCACATATCGTGTTGCGGCTTAGCTGTTTGGTCTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp AAGACTCAAGAAGCAACAAGAGAAATTCTGGCACACGTGCCCAAGAGAGGTTTACCGCCTCTCTCTAACTaGTTCACGATCGGGCCATCC +
Preference number: 4 (lower is better)
Translates to: KTQEATREILAHVPKRGLPPLSN*FTIGPS
Trigger: GGATGGCCCGATCGTGAAGCAGTTAGAGAGAGGCGG...TAAACCTCTCTTGGGCACGTGTGCCAGAATTTCTCTTGTTGCTTCTTGAGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp AAGACTCAAGAAGCAACAAGAGAAATTCTGGCACACGTGCCCAAGAGAGGTTTAGAAGCCTGGTCTCCCTaGAAAGCCGGGAGGCATCAA +
Preference number: 4 (lower is better)
Translates to: KTQEATREILAHVPKRGLEAWSP*KAGRHQ
Trigger: TTGATGCCTCCCGGCTTTGCAGGGAGACCAGGCTTC...TAAACCTCTCTTGGGCACGTGTGCCAGAATTTCTCTTGTTGCTTCTTGAGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp AGCTCGGGAAATGTTGGCAAAACACCCTTTCATCATGCAAGGAAGAGACAGAATGAAGCCTGGTCTCCCTaGAAAGCCGGGAGGCATCAA +
Preference number: 4 (lower is better)
Translates to: SSGNVGKTPFHHARKRQNEAWSP*KAGRHQ
Trigger: TTGATGCCTCCCGGCTTTGCAGGGAGACCAGGCTTC...ATTCTGTCTCTTCCTTGCATGATGAAAGGGTGTTTTGCCAACATTTCCCGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR GCA 90 bp AAGACTCAAGAAGCAACAAGAGAAATTCTGGCACACGTGCCCAAGAGAGGTTTACCCCACCTGCCAGCATaGATAGCTGACCAGTCCCTA +
Preference number: 4 (lower is better)
Translates to: KTQEATREILAHVPKRGLPHLPA*IADQSL
Trigger: TAGGGACTGGTCAGCTATGCATGCTGGCAGGTGGGG...TAAACCTCTCTTGGGCACGTGTGCCAGAATTTCTCTTGTTGCTTCTTGAGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp AAGACTCAAGAAGCAACAAGAGAAATTCTGGCACACGTGCCCAAGAGAGGTTTATCACCAGGCCTGAGCTaGAATGATCCCCCAACTGGC +
Preference number: 4 (lower is better)
Translates to: KTQEATREILAHVPKRGLSPGLS*NDPPTG
Trigger: GCCAGTTGGGGGATCATTGCAGCTCAGGCCTGGTGA...TAAACCTCTCTTGGGCACGTGTGCCAGAATTTCTCTTGTTGCTTCTTGAGTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp TTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTGTTTTCATGACAGGGAGCAGCAGGAAATaGGGTCTGGCCACGTTTCTG +
Preference number: 4 (lower is better)
Translates to: FSRLELDTPDDAQGVFMTGSSRK*GLATFL
Trigger: CAGAAACGTGGCCAGACCGCATTTCCTGCTGCTCCC...TGTCATGAAAACACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp TCTGTGATCAATGAGAAATCTCACACTGCAGGACGACACCCTCTGAACTCCGTCCCTCTCTTGGGTTACTaGCAAAGCCCACAGGTAAAG +
Preference number: 4 (lower is better)
Translates to: SVINEKSHTAGRHPLNSVPLLGY*QSPQVK
Trigger: CTTTACCTGTGGGCTTTGGCAGTAACCCAAGAGAGG...GACGGAGTTCAGAGGGTGTCGTCCTGCAGTGTGAGATTTCTCATTGATCACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp ACACCAGATGATGCCCAAGGTGTTTTCATGACAAGTACCCACACGAGATCTCTTTCCAGCACAGAAGGCTaGAAAAGTGGAACTGGCCCC +
Preference number: 4 (lower is better)
Translates to: TPDDAQGVFMTSTHTRSLSSTEG*KSGTGP
Trigger: GGGGCCAGTTCCACTTTTGCAGCCTTCTGTGCTGGA...AAGAGATCTCGTGTGGGTACTTGTCATGAAAACACCTTGGGCATCATCTGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp GGGAAACCAGAATTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTTGCCTGATGACTTCCTaGCAGGAGAAGCCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: GKPEFSRLELDTPDDAQGCLMTS*QEKPKP
Trigger: TGGCTTTGGCTTCTCCTGGCAGGAAGTCATCAGGCA...ACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAATTCTGGTTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp CGTTTTGGATCTGGTAGCCTAAAGTCTCAACTCATAATGAGTCAATGTCTGGCTTCTGATGGCCCCAGGTaGTCTCCCACGAGGAGACAG +
Preference number: 4 (lower is better)
Translates to: RFGSGSLKSQLIMSQCLASDGPR*SPTRRQ
Trigger: CTGTCTCCTCGTGGGAGAGCACCTGGGGCCATCAGA...AGCCAGACATTGACTCATTATGAGTTGAGACTTTAGGCTACCAGATCCAAAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR GCA 90 bp GCGGCCTCACCTCGAACCCATGCGGGATCTTCCAAGAGTGCAATTCCCACAGCTGTTGCCTGGTTTAACTaGAAACTTTGCTATGAGTTT +
Preference number: 4 (lower is better)
Translates to: AASPRTHAGSSKSAIPTAVAWFN*KLCYEF
Trigger: AAACTCATAGCAAAGTTTGCAGTTAAACCAGGCAAC...AGCTGTGGGAATTGCACTCTTGGAAGATCCCGCATGGGTTCGAGGTGAGGCCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR GCA 90 bp GGGAAACCAGAATTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTAGAGAGGCAACAGCCTaGAGTTTGCCAAGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GKPEFSRLELDTPDDAQGREATA*SLPSPA
Trigger: AGCTGGACTTGGCAAACTGCAGGCTGTTGCCTCTCT...ACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAATTCTGGTTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR GCA 90 bp TCTGCTAGTTACCACCAGGAAGATCAGATCATAACATGGACGCATGGTATGTTATCCCAAAACATTCCCTaGCCCTGCTCCCCCGGTCCA +
Preference number: 4 (lower is better)
Translates to: SASYHQEDQIITWTHGMLSQNIP*PCSPGP
Trigger: TGGACCGGGGGAGCAGGGGCAGGGAATGTTTTGGGA...TAACATACCATGCGTCCATGTTATGATCTGATCTTCCTGGTGGTAACTAGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR CCA 90 bp CCCTCCTTTGCAGACATCATGACCGTAAGGCTTTTGGGGCCAGCATCTTCCCAGTGCCTGCACCAATTCTaGGATGGTAAAAGGAAGTTT +
Preference number: 4 (lower is better)
Translates to: PSFADIMTVRLLGPASSQCLHQF*DGKRKF
Trigger: AAACTTCCTTTTACCATCCCAGAATTGGTGCAGGCA...CTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAAGGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp CTACAGACCAAACAGCTAAGCCGCAACACGATATGTGATGGTGCAGAGCTGTTCCATAGTCAAAGTAGGTaGCATTCCACCGGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: LQTKQLSRNTICDGAELFHSQSR*HSTGAL
Trigger: GAGAGCTCCGGTGGAATGCCACCTACTTTGACTATG...GAACAGCTCTGCACCATCACATATCGTGTTGCGGCTTAGCTGTTTGGTCTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp GCCGCAACACGATATGTGATGGTGCAGAGCTGTTCTGGCCTGAAAAGAACTTTCCCAGCCCATCACCATTaGACACAAAGTGGGACATCT +
Preference number: 4 (lower is better)
Translates to: AATRYVMVQSCSGLKRTFPAHHH*TQSGTS
Trigger: AGATGTCCCACTTTGTGTCCAATGGTGATGGGCTGG...GAAAGTTCTTTTCAGGCCAGAACAGCTCTGCACCATCACATATCGTGTTGCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp CACAGCTTTAGGGACACTGAAAAGGAATACTGTATCCACCAAACACACACACAGGCGTCAGCTTGCTCTTaGCCTCTGTCTCCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: HSFRDTEKEYCIHQTHTQASACS*PLSPWG
Trigger: TCCCCAAGGAGACAGAGGCCAAGAGCAAGCTGACGC...CTGTGTGTGTGTTTGGTGGATACAGTATTCCTTTTCAGTGTCCCTAAAGCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp AAGACTCAAGAAGCAACAAGAGAAATTCTGGCACACGTGCCCAAGAGAGGTTTAGTGACGCCATCAGTCTaGGGCCCTTCCAGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: KTQEATREILAHVPKRGLVTPSV*GPSSKG
Trigger: TCCTTTGCTGGAAGGGCCCCAGACTGATGGCGTCAC...TAAACCTCTCTTGGGCACGTGTGCCAGAATTTCTCTTGTTGCTTCTTGAGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp CGGCACCCTATATCCTGCCTAGCTCAATACACTAAGTGCTCAAATAAAATACATAGCCGTGTCTCCAGGTaGGTGGAAGGGCAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RHPISCLAQYTKCSNKIHSRVSR*VEGQLL
Trigger: CAGCAGCTGCCCTTCCACCCACCTGGAGACACGGCT...ATGTATTTTATTTGAGCACTTAGTGTATTGAGCTAGGCAGGATATAGGGTGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp CTACAGACCAAACAGCTAAGCCGCAACACGATATGTGATGGTGCAGAGCTGTTCTCGATGGCAATGTACTaGAATTGCCGGTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LQTKQLSRNTICDGAELFSMAMY*NCRSFS
Trigger: GGAGAAGGACCGGCAATTCCAGTACATTGCCATCGA...GAACAGCTCTGCACCATCACATATCGTGTTGCGGCTTAGCTGTTTGGTCTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp GCCGCAACACGATATGTGATGGTGCAGAGCTGTTCTGGCCTGAAAAGAACTTTCTCGATGGCAATGTACTaGAATTGCCGGTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: AATRYVMVQSCSGLKRTFSMAMY*NCRSFS
Trigger: GGAGAAGGACCGGCAATTCCAGTACATTGCCATCGA...GAAAGTTCTTTTCAGGCCAGAACAGCTCTGCACCATCACATATCGTGTTGCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp ACACCAGATGATGCCCAAGGTGTTTTCATGACAAGTACCCACACGAGATCTCTTCATACTCTTGCAGGGTaGCTGCACACAGCTCGATGG +
Preference number: 4 (lower is better)
Translates to: TPDDAQGVFMTSTHTRSLHTLAG*LHTARW
Trigger: CCATCGAGCTGTGTGCAGCCACCCTGCAAGAGTATG...AAGAGATCTCGTGTGGGTACTTGTCATGAAAACACCTTGGGCATCATCTGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp TCTAGAGTTGGTGGGAAGAAACTCTGCTGGATCTACTCACCTGCAGATCTTCCAGTCTTCGTGCTTCTCTaGGTGCAAGCAGTCAAGGCT +
Preference number: 4 (lower is better)
Translates to: SRVGGKKLCWIYSPADLPVFVLL*VQAVKA
Trigger: AGCCTTGACTGCTTGCACCCAGAGAAGCACGAAGAC...TGGAAGATCTGCAGGTGAGTAGATCCAGCAGAGTTTCTTCCCACCAACTCTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp GGGAAACCAGAATTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTTTACGCAGGTCTGTCTaGAGGGGGACAGTGATGTTC +
Preference number: 4 (lower is better)
Translates to: GKPEFSRLELDTPDDAQGLRRSV*RGTVMF
Trigger: GAACATCACTGTCCCCCTCCAGACAGACCTGCGTAA...ACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAATTCTGGTTTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433197.4
CDS-3UTR CCA 90 bp TTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTGTTTTCATGACATGGAAGAGTCTCTCGTaGCTGCACAGCTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: FSRLELDTPDDAQGVFMTWKSLS*LHSSMA
Trigger: GGCCATGGAGCTGTGCAGCCACGAGAGACTCTTCCA...TGTCATGAAAACACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp TCTAGAGTTGGTGGGAAGAAACTCTGCTGGATCTACTCACCTGCAGATCTTCCATTGTTCCACCGGCCTTaGGGACGAAGGAGTTTGACT +
Preference number: 4 (lower is better)
Translates to: SRVGGKKLCWIYSPADLPLFHRP*GRRSLT
Trigger: AGTCAAACTCCTTCGTCCCCAAGGCCGGTGGAACAA...TGGAAGATCTGCAGGTGAGTAGATCCAGCAGAGTTTCTTCCCACCAACTCTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp CTACAGACCAAACAGCTAAGCCGCAACACGATATGTGATGGTGCAGAGCTGTTCCTTCTGATCCTCTCTTaGGTTACTGCCAAAGCCCAC +
Preference number: 4 (lower is better)
Translates to: LQTKQLSRNTICDGAELFLLILS*VTAKAH
Trigger: GTGGGCTTTGGCAGTAACCCAAGAGAGGATCAGAAG...GAACAGCTCTGCACCATCACATATCGTGTTGCGGCTTAGCTGTTTGGTCTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp TCTAGAGTTGGTGGGAAGAAACTCTGCTGGATCTACTCACCTGCAGATCTTCCACCATCCTGCCTAACATaGGGAAACCCCGTCTCTACT +
Preference number: 4 (lower is better)
Translates to: SRVGGKKLCWIYSPADLPPSCLT*GNPVST
Trigger: AGTAGAGACGGGGTTTCCCCATGTTAGGCAGGATGG...TGGAAGATCTGCAGGTGAGTAGATCCAGCAGAGTTTCTTCCCACCAACTCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp GAAAAGCCAATGTCCTCACACCAGCCACTAGGCCCTACACCAGTGGTATCCGTAAGCTGCCATCATCTATaGATGGTAACGAGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: EKPMSSHQPLGPTPVVSVSCHHL*MVTRFA
Trigger: AGCAAACCTCGTTACCATCCATAGATGATGGCAGCT...TACGGATACCACTGGTGTAGGGCCTAGTGGCTGGTGTGAGGACATTGGCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR CAA 72 bp GCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTaGTGGCTTTCCAACGTCTACAGAAAGAATTTAAGC +
Preference number: 4 (lower is better)
Translates to: AAPVGGSLQSRS*WLSNVYRKNLS
Trigger: GCTTAAATTCTTTCTGTAGACGTTGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR CAA 72 bp GAGATTGGAGTGTCCGTCCCAGTGGGGTCCCCGCATTaGAGGTATGTTTATACATGTTTACACACAGTGGCT +
Preference number: 4 (lower is better)
Translates to: EIGVSVPVGSPH*RYVYTCLHTVA
Trigger: AGCCACTGTGTGTAAACATGTATAAACATACCTCAAATGCGGGGACCCCACTGGGACGGACACTCCAATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680433.1
3UTR CAA 72 bp AGCAAGCAAAGCTTCATCTGTATTTACAGCCGCTCCTaGTCACTGGCATTACTGCCTAAGCTCCACCTCCTG +
Preference number: 4 (lower is better)
Translates to: SKQSFICIYSRS*SLALLPKLHLL
Trigger: CAGGAGGTGGAGCTTAGGCAGTAATGCCAGTGACAAGGAGCGGCTGTAAATACAGATGAAGCTTTGCTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR CAA 72 bp AAATATTCAGTCCAGAACAACAGGGCATGTTGCTCCTaGCCTCAGGTTCCTCCAACGGCTGAGGAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: KYSVQNNRACCS*PQVPPTAEEKP
Trigger: TGGCTTTTCCTCAGCCGTTGGAGGAACCTGAGGCAAGGAGCAACATGCCCTGTTGTTCTGGACTGAATATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR TCA 90 bp TTTGCAGACATCATGACCGTAAGGCTTTTGGGGCCAGCATCTTCCCAGTTCCCTACTTCCATCCAGCGTTaGCACAAACAACAAGGTTTC +
Preference number: 4 (lower is better)
Translates to: FADIMTVRLLGPASSQFPTSIQR*HKQQGF
Trigger: GAAACCTTGTTGTTTGTGTCAACGCTGGATGGAAGT...AGGGAACTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp AGTACTTCTAAAAAGCTCAACAGCCTTCCAGGATTGGAGAAGTCCCATAACCTGGGGGGAAGCGAGATGTaGAGTAGCACACGAAGTCGT +
Preference number: 4 (lower is better)
Translates to: STSKKLNSLPGLEKSHNLGGSEM*SSTRSR
Trigger: ACGACTTCGTGTGCTACTTCACATCTCGCTTCCCCC...CAGGTTATGGGACTTCTCCAATCCTGGAAGGCTGTTGAGCTTTTTAGAAGTACT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp AAGACTCAAGAAGCAACAAGAGAAATTCTGGCACACGTGCCCAAGAGAGGTTTAGCCAGCATGCATAGCTaGCCAGTCCCTAATGCCACA +
Preference number: 4 (lower is better)
Translates to: KTQEATREILAHVPKRGLASMHS*PVPNAT
Trigger: TGTGGCATTAGGGACTGGTCAGCTATGCATGCTGGC...TAAACCTCTCTTGGGCACGTGTGCCAGAATTTCTCTTGTTGCTTCTTGAGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp ACACCAGATGATGCCCAAGGTGTTTTCATGACAAGTACCCACACGAGATCTCTTCAGCCTCTTCATTTCTaGGACCTGCAGACACAACCC +
Preference number: 4 (lower is better)
Translates to: TPDDAQGVFMTSTHTRSLQPLHF*DLQTQP
Trigger: GGGTTGTGTCTGCAGGTCTCAGAAATGAAGAGGCTG...AAGAGATCTCGTGTGGGTACTTGTCATGAAAACACCTTGGGCATCATCTGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp AAGACTCAAGAAGCAACAAGAGAAATTCTGGCACACGTGCCCAAGAGAGGTTTAGTCTGGCCACGTTTCTaGACAACGCACAGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: KTQEATREILAHVPKRGLVWPRF*TTHSLA
Trigger: AGCAAGGCTGTGCGTTGTTCAGAAACGTGGCCAGAC...TAAACCTCTCTTGGGCACGTGTGCCAGAATTTCTCTTGTTGCTTCTTGAGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp CTACAGACCAAACAGCTAAGCCGCAACACGATATGTGATGGTGCAGAGCTGTTCATAACTCCAGGTTGGTaGGGGAAGGGACAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: LQTKQLSRNTICDGAELFITPGW*GKGQGK
Trigger: TTTTCCTTGTCCCTTCCCTCACCAACCTGGAGTTAT...GAACAGCTCTGCACCATCACATATCGTGTTGCGGCTTAGCTGTTTGGTCTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp ACTGCGTTCTGCACATCACTGTTGCCTGGTTTAACTGCAAACTTTGCTATGAGTAAGCCAGCTCTCGGGTaGGAGTCCTTACTCCCTGTT +
Preference number: 4 (lower is better)
Translates to: TAFCTSLLPGLTANFAMSKPALG*ESLLPV
Trigger: AACAGGGAGTAAGGACTCTCACCCGAGAGCTGGCTT...ACTCATAGCAAAGTTTGCAGTTAAACCAGGCAACAGTGATGTGCAGAACGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR TCA 90 bp TGTGAACAGATGCCAGGCAGTAGTTACCAATCCAAGGTGAGGTGCTCAAGTTCAGGCACAGCTAGCAAGTaGCCAGTTAGAACTCAGGTT +
Preference number: 4 (lower is better)
Translates to: CEQMPGSSYQSKVRCSSSGTASK*PVRTQV
Trigger: AACCTGAGTTCTAACTGGTCACTTGCTAGCTGTGCC...TGAACTTGAGCACCTCACCTTGGATTGGTAACTACTGCCTGGCATCTGTTCACA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR TCA 90 bp TTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTGTTTTCATGACAAGGAGTAAAGTCGCCTaGGATTGGAGTGTCCGTCCC +
Preference number: 4 (lower is better)
Translates to: FSRLELDTPDDAQGVFMTRSKVA*DWSVRP
Trigger: GGGACGGACACTCCAATCTCAGGCGACTTTACTCCT...TGTCATGAAAACACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR TCA 90 bp GAACCTGTAATAAAACACTCTACAGTCTTCCTGTGGCCACACACTCCTGAGAGAGCAAGAGGTGAGCAGTaGGTGAGCAAGCAAAGCTTC +
Preference number: 4 (lower is better)
Translates to: EPVIKHSTVFLWPHTPERARGEQ*VSKQSF
Trigger: GAAGCTTTGCTTGCTCACTCACTGCTCACCTCTTGC...TCTCTCAGGAGTGTGTGGCCACAGGAAGACTGTAGAGTGTTTTATTACAGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR TCA 90 bp AAAAGGGTTTGCCTGTTTTGTTCACTTGCTGTATCCTCAGGACCTAGAGTAGCAGAGCTCTTGCTCAAATaGCACCTTCTCCGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: KRVCLFCSLAVSSGPRVAELLLK*HLLRGA
Trigger: GGCTCCACGGAGAAGGTGTCATTTGAGCAAGAGCTC...TGCTACTCTAGGTCCTGAGGATACAGCAAGTGAACAAAACAGGCAAACCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR TCA 90 bp AAAAGGGTTTGCCTGTTTTGTTCACTTGCTGTATCCTCAGGACCTAGAGTAGCAATGGTGGAGAGAGAATaGGCGAGCTCTGGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: KRVCLFCSLAVSSGPRVAMVERE*ASSGLS
Trigger: GGAGAGACCAGAGCTCGCTCATTCTCTCTCCACCAT...TGCTACTCTAGGTCCTGAGGATACAGCAAGTGAACAAAACAGGCAAACCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR GCA 90 bp GCCGCAACACGATATGTGATGGTGCAGAGCTGTTCTGGCCTGAAAAGAACTTTCCTCTTGCTGACAGCATaGAAACTTCCATCCAGCGTT +
Preference number: 4 (lower is better)
Translates to: AATRYVMVQSCSGLKRTFLLLTA*KLPSSV
Trigger: AACGCTGGATGGAAGTTTGCATGCTGTCAGCAAGAG...GAAAGTTCTTTTCAGGCCAGAACAGCTCTGCACCATCACATATCGTGTTGCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp CACAGCTTTAGGGACACTGAAAAGGAATACTGTATCCACCAAACACACACACAGCGGCATGGGGATGCCTaGACCAATTCTGGGATGGTA +
Preference number: 4 (lower is better)
Translates to: HSFRDTEKEYCIHQTHTQRHGDA*TNSGMV
Trigger: TACCATCCCAGAATTGGTGCAGGCATCCCCATGCCG...CTGTGTGTGTGTTTGGTGGATACAGTATTCCTTTTCAGTGTCCCTAAAGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp AGCTCGGGAAATGTTGGCAAAACACCCTTTCATCATGCAAGGAAGAGACAGAATAGTTCCTTCTGGAACTaGTGGTGCTGGAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SSGNVGKTPFHHARKRQNSSFWN*WCWSCC
Trigger: GCAGCAGCTCCAGCACCAGCAGTTCCAGAAGGAACT...ATTCTGTCTCTTCCTTGCATGATGAAAGGGTGTTTTGCCAACATTTCCCGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR GCA 90 bp AGTACTTCTAAAAAGCTCAACAGCCTTCCAGGATTGGAGAAGTCCCATAACCTGCTGGACCTCACGGTCTaGGAAGCTAAAACACTCGGG +
Preference number: 4 (lower is better)
Translates to: STSKKLNSLPGLEKSHNLLDLTV*EAKTLG
Trigger: CCCGAGTGTTTTAGCTTCGCAGACCGTGAGGTCCAG...CAGGTTATGGGACTTCTCCAATCCTGGAAGGCTGTTGAGCTTTTTAGAAGTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp ACACCAGATGATGCCCAAGGTGTTTTCATGACAAGTACCCACACGAGATCTCTTGCAATGTACTGGAATTaGCGGTCCTTCTCCGTGCAG +
Preference number: 4 (lower is better)
Translates to: TPDDAQGVFMTSTHTRSLAMYWN*RSFSVQ
Trigger: CTGCACGGAGAAGGACCGGCAATTCCAGTACATTGC...AAGAGATCTCGTGTGGGTACTTGTCATGAAAACACCTTGGGCATCATCTGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp TTAAGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCACTCTATCAATTCACGTaGAATGACGTCTTCGTGCTT +
Preference number: 4 (lower is better)
Translates to: LRLLQWEAHCSHVLCGFPLYQFT*NDVFVL
Trigger: AAGCACGAAGACGTCATTGCACGTGAATTGATAGAG...TGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp TCTAGAGTTGGTGGGAAGAAACTCTGCTGGATCTACTCACCTGCAGATCTTCCATCTGAGGCCCTCCTTTaGAGACATCATGACCGTAAG +
Preference number: 4 (lower is better)
Translates to: SRVGGKKLCWIYSPADLPSEALL*RHHDRK
Trigger: CTTACGGTCATGATGTCTGCAAAGGAGGGCCTCAGA...TGGAAGATCTGCAGGTGAGTAGATCCAGCAGAGTTTCTTCCCACCAACTCTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp AGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCAACGCAATTAATCTCTCACTaGAGCAAGAAAAGAATTGCC +
Preference number: 4 (lower is better)
Translates to: RLLQWEAHCSHVLCGFPTQLISH*SKKRIA
Trigger: GGCAATTCTTTTCTTGCTGCAGTGAGAGATTAATTG...CGTTGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp AATAAGACACACACTGAAAGAAAATCACAGTATTGCCTCCAATGCAATAGTTACCGGGGCCGAAGGCGGTaGTGGCATCTGGCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: NKTHTERKSQYCLQCNSYRGRRR*WHLAGF
Trigger: GAAGCCAGCCAGATGCCAGCACCGCCTTCGGCCCCG...GTAACTATTGCATTGGAGGCAATACTGTGATTTTCTTTCAGTGTGTGTCTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR GCA 90 bp GTACAACCAAGGATTGCCCTGCATCTGCATGCCACTCTGATGTCCTGCCAGACATCAGTCAGATACAAATaGCTAAGTGCTCCATCCAGT +
Preference number: 4 (lower is better)
Translates to: VQPRIALHLHATLMSCQTSVRYK*LSAPSS
Trigger: ACTGGATGGAGCACTTAGGCATTTGTATCTGACTGA...TGTCTGGCAGGACATCAGAGTGGCATGCAGATGCAGGGCAATCCTTGGTTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR CCA 90 bp GCCGCAACACGATATGTGATGGTGCAGAGCTGTTCTGGCCTGAAAAGAACTTTCGAAGCGTCACTGTGCTaGTACTTCCAAAAATCCCGA +
Preference number: 4 (lower is better)
Translates to: AATRYVMVQSCSGLKRTFEASLC*YFQKSR
Trigger: TCGGGATTTTTGGAAGTACCAGCACAGTGACGCTTC...GAAAGTTCTTTTCAGGCCAGAACAGCTCTGCACCATCACATATCGTGTTGCGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp GGTGATCACACCCAGGTCAGAAATGACCACCTAGAGCACGACACCATCACTCACTGCCTGCACCAATTCTaGGATGGTAAAAGGAAGTTT +
Preference number: 4 (lower is better)
Translates to: GDHTQVRNDHLEHDTITHCLHQF*DGKRKF
Trigger: AAACTTCCTTTTACCATCCCAGAATTGGTGCAGGCA...GTGAGTGATGGTGTCGTGCTCTAGGTGGTCATTTCTGACCTGGGTGTGATCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR CCA 90 bp GGGAAACCAGAATTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTGGTAGACGCAGACAGTaGGGTTTCATGGTGTCCTAT +
Preference number: 4 (lower is better)
Translates to: GKPEFSRLELDTPDDAQGGRRRQ*GFMVSY
Trigger: ATAGGACACCATGAAACCCCACTGTCTGCGTCTACC...ACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAATTCTGGTTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp ACACCAGATGATGCCCAAGGTGTTTTCATGACAAGTACCCACACGAGATCTCTTTGCTGCTGCAGGAGCTaGATCTTCTCCAGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: TPDDAQGVFMTSTHTRSLCCCRS*IFSSSF
Trigger: GAAGGAACTGGAGAAGATCCAGCTCCTGCAGCAGCA...AAGAGATCTCGTGTGGGTACTTGTCATGAAAACACCTTGGGCATCATCTGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp ACACCAGATGATGCCCAAGGTGTTTTCATGACAAGTACCCACACGAGATCTCTTTTCGCTCAGCATCTCTaGAGCGATCCAGCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: TPDDAQGVFMTSTHTRSLFAQHL*SDPAFC
Trigger: ACAGAAGGCTGGATCGCTCCAGAGATGCTGAGCGAA...AAGAGATCTCGTGTGGGTACTTGTCATGAAAACACCTTGGGCATCATCTGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp ACACCAGATGATGCCCAAGGTGTTTTCATGACAAGTACCCACACGAGATCTCTTGTCTTCGTGCTTCTCTaGGTGCAAGCAGTCAAGGCT +
Preference number: 4 (lower is better)
Translates to: TPDDAQGVFMTSTHTRSLVFVLL*VQAVKA
Trigger: AGCCTTGACTGCTTGCACCCAGAGAAGCACGAAGAC...AAGAGATCTCGTGTGGGTACTTGTCATGAAAACACCTTGGGCATCATCTGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp CGGCACCCTATATCCTGCCTAGCTCAATACACTAAGTGCTCAAATAAAATACATCAGCACTGTCCTCTGTaGGCTGCAGAGCAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: RHPISCLAQYTKCSNKIHQHCPL*AAEQAA
Trigger: AGCTGCCTGCTCTGCAGCCCACAGAGGACAGTGCTG...ATGTATTTTATTTGAGCACTTAGTGTATTGAGCTAGGCAGGATATAGGGTGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp CCCTCCTTTGCAGACATCATGACCGTAAGGCTTTTGGGGCCAGCATCTTCCCAGCAGGTGAAAATGTTTTaGTGCCTAATGACTTGTGGA +
Preference number: 4 (lower is better)
Translates to: PSFADIMTVRLLGPASSQQVKMF*CLMTCG
Trigger: TCCACAAGTCATTAGGCACCAAAACATTTTCACCTG...CTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAAGGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp CACAGCTTTAGGGACACTGAAAAGGAATACTGTATCCACCAAACACACACACAGAGAAGGCTGCAAAAGTaGAACTGGCCCCCAGTTCCC +
Preference number: 4 (lower is better)
Translates to: HSFRDTEKEYCIHQTHTQRRLQK*NWPPVP
Trigger: GGGAACTGGGGGCCAGTTCCACTTTTGCAGCCTTCT...CTGTGTGTGTGTTTGGTGGATACAGTATTCCTTTTCAGTGTCCCTAAAGCTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp TGCAAAGCCGGGAGGCATCAAGCTCTAATTGTGGTGACCAGGCCCTCAGTCACAAAAGCATCCATCCCATaGAAGGATACAGTATCACTT +
Preference number: 4 (lower is better)
Translates to: CKAGRHQALIVVTRPSVTKASIP*KDTVSL
Trigger: AAGTGATACTGTATCCTTCCATGGGATGGATGCTTT...TGTGACTGAGGGCCTGGTCACCACAATTAGAGCTTGATGCCTCCCGGCTTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp GCTACTCGCGCTGTCTCTGAGGCCCTCCTTTGCAGACATCATGACCGTAAGGCTCTAAAAAGAGGATTTTaGGTTCCACAAAGAAGACTG +
Preference number: 4 (lower is better)
Translates to: ATRAVSEALLCRHHDRKALKRGF*VPQRRL
Trigger: CAGTCTTCTTTGTGGAACCCAAAATCCTCTTTTTAG...AGCCTTACGGTCATGATGTCTGCAAAGGAGGGCCTCAGAGACAGCGCGAGTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp GCACCTTCTCCACCTTCTGATCCTCTCTTGGGTTACTGCCAAAGCCCACAGGTAAAAGAAAACAATTCATaGGGTCCTGGGATTAGGGAG +
Preference number: 4 (lower is better)
Translates to: APSPPSDPLLGYCQSPQVKENNS*GPGIRE
Trigger: CTCCCTAATCCCAGGACCCCATGAATTGTTTTCTTT...TACCTGTGGGCTTTGGCAGTAACCCAAGAGAGGATCAGAAGGTGGAGAAGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR CCA 90 bp CACCAGGAAGATCAGATCATAACATGGACGCATGGTATGTTAAGTAAGAAAGAACAGGGCCCATGCAGGTaGGGCAGGATGGCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: HQEDQIITWTHGMLSKKEQGPCR*GRMACG
Trigger: ACCACAAGCCATCCTGCCCCACCTGCATGGGCCCTG...TTCTTTCTTACTTAACATACCATGCGTCCATGTTATGATCTGATCTTCCTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR CCA 90 bp AAAAGGGTTTGCCTGTTTTGTTCACTTGCTGTATCCTCAGGACCTAGAGTAGCACACAGCATTTGTTCCTaGGGGGAGTGTCAGCGTGTG +
Preference number: 4 (lower is better)
Translates to: KRVCLFCSLAVSSGPRVAHSICS*GECQRV
Trigger: CACACGCTGACACTCCCCCCAGGAACAAATGCTGTG...TGCTACTCTAGGTCCTGAGGATACAGCAAGTGAACAAAACAGGCAAACCCTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR TCA 90 bp AGCTCGGGAAATGTTGGCAAAACACCCTTTCATCATGCAAGGAAGAGACAGAATGTAGAGGATTCCATCTaGACTTCGGCATGGGGATGC +
Preference number: 4 (lower is better)
Translates to: SSGNVGKTPFHHARKRQNVEDSI*TSAWGC
Trigger: GCATCCCCATGCCGAAGTTCAGATGGAATCCTCTAC...ATTCTGTCTCTTCCTTGCATGATGAAAGGGTGTTTTGCCAACATTTCCCGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR TCA 90 bp ACACCAGATGATGCCCAAGGTGTTTTCATGACAAGTACCCACACGAGATCTCTTTGGTGTCGTACATGGTaGTGGTGTATTCTGTTCGCC +
Preference number: 4 (lower is better)
Translates to: TPDDAQGVFMTSTHTRSLWCRTW*WCILFA
Trigger: GGCGAACAGAATACACCATCACCATGTACGACACCA...AAGAGATCTCGTGTGGGTACTTGTCATGAAAACACCTTGGGCATCATCTGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp GAGATTAGAAAGGGGTTAGAAAGCTCGGGAAATGTTGGCAAAACACCCTTTCATGGGGGAAGCGAGATGTaGAGTAGCACACGAAGTCGT +
Preference number: 4 (lower is better)
Translates to: EIRKGLESSGNVGKTPFHGGSEM*SSTRSR
Trigger: ACGACTTCGTGTGCTACTTCACATCTCGCTTCCCCC...ATGAAAGGGTGTTTTGCCAACATTTCCCGAGCTTTCTAACCCCTTTCTAATCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR TCA 90 bp AAGACTCAAGAAGCAACAAGAGAAATTCTGGCACACGTGCCCAAGAGAGGTTTACTTCGCTGCTCTCCTTaGAGGCCAGGGAACTCTTTA +
Preference number: 4 (lower is better)
Translates to: KTQEATREILAHVPKRGLLRCSP*RPGNSL
Trigger: TAAAGAGTTCCCTGGCCTTCAAGGAGAGCAGCGAAG...TAAACCTCTCTTGGGCACGTGTGCCAGAATTTCTCTTGTTGCTTCTTGAGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp TTAAGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCATCTACAAAGGCAGAATaGGAGCTTTTGATGAGTAAC +
Preference number: 4 (lower is better)
Translates to: LRLLQWEAHCSHVLCGFPSTKAE*ELLMSN
Trigger: GTTACTCATCAAAAGCTCTCATTCTGCCTTTGTAGA...TGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp TCTGTGATCAATGAGAAATCTCACACTGCAGGACGACACCCTCTGAACTCCGTCAGAAGTCCCATAACCTaGACTACAGACCAAACAGCT +
Preference number: 4 (lower is better)
Translates to: SVINEKSHTAGRHPLNSVRSPIT*TTDQTA
Trigger: AGCTGTTTGGTCTGTAGTTCAGGTTATGGGACTTCT...GACGGAGTTCAGAGGGTGTCGTCCTGCAGTGTGAGATTTCTCATTGATCACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp GCCGCAACACGATATGTGATGGTGCAGAGCTGTTCTGGCCTGAAAAGAACTTTCAGAATGCAGAGTAGGTaGCTGGTAATGCTTTCTAGG +
Preference number: 4 (lower is better)
Translates to: AATRYVMVQSCSGLKRTFRMQSR*LVMLSR
Trigger: CCTAGAAAGCATTACCAGTCACCTACTCTGCATTCT...GAAAGTTCTTTTCAGGCCAGAACAGCTCTGCACCATCACATATCGTGTTGCGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp CTTTCACCTGAAAAACGGAGTCCAAATCTGGGGCAGGCAAATAATGAAACCCTCATGAAAAGACATTTCTaGTGGCCCCAGGTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: LSPEKRSPNLGQANNETLMKRHF*WPQVLS
Trigger: GGAGAGCACCTGGGGCCATCAGAAATGTCTTTTCAT...GAGGGTTTCATTATTTGCCTGCCCCAGATTTGGACTCCGTTTTTCAGGTGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR TCA 90 bp CCCTCCAAATGGATGTGGGCTCACAGCACATTACTAGTCCCTCTCATGAGTGGTGAACCTCGGGCCAAATaGGATTTATTACTAGACAGA +
Preference number: 4 (lower is better)
Translates to: PSKWMWAHSTLLVPLMSGEPRAK*DLLLDR
Trigger: TCTGTCTAGTAATAAATCTCATTTGGCCCGAGGTTC...ACCACTCATGAGAGGGACTAGTAATGTGCTGTGAGCCCACATCCATTTGGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR TCA 90 bp CCCTCCAAATGGATGTGGGCTCACAGCACATTACTAGTCCCTCTCATGAGTGGTTCACAAGACAATGTGTaGCCTTCTGACATATGCCAA +
Preference number: 4 (lower is better)
Translates to: PSKWMWAHSTLLVPLMSGSQDNV*PSDICQ
Trigger: TTGGCATATGTCAGAAGGTCACACATTGTCTTGTGA...ACCACTCATGAGAGGGACTAGTAATGTGCTGTGAGCCCACATCCATTTGGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR TCA 90 bp GTACAACCAAGGATTGCCCTGCATCTGCATGCCACTCTGATGTCCTGCCAGACAACCACAAGATTAAACTaGAAACTCAGGGTATCTGCA +
Preference number: 4 (lower is better)
Translates to: VQPRIALHLHATLMSCQTTTRLN*KLRVSA
Trigger: TGCAGATACCCTGAGTTTTCAGTTTAATCTTGTGGT...TGTCTGGCAGGACATCAGAGTGGCATGCAGATGCAGGGCAATCCTTGGTTGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR GCA 90 bp AGTACTTCTAAAAAGCTCAACAGCCTTCCAGGATTGGAGAAGTCCCATAACCTGACTTCGGCATGGGGATaGCTGCACCAATTCTGGGAT +
Preference number: 4 (lower is better)
Translates to: STSKKLNSLPGLEKSHNLTSAWG*LHQFWD
Trigger: ATCCCAGAATTGGTGCAGGCATCCCCATGCCGAAGT...CAGGTTATGGGACTTCTCCAATCCTGGAAGGCTGTTGAGCTTTTTAGAAGTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp GAGATTAGAAAGGGGTTAGAAAGCTCGGGAAATGTTGGCAAAACACCCTTTCATGCCGATGACAAAGTCTaGTGCTTCTCTCCGGTCAGG +
Preference number: 4 (lower is better)
Translates to: EIRKGLESSGNVGKTPFHADDKV*CFSPVR
Trigger: CCTGACCGGAGAGAAGCAGCAGACTTTGTCATCGGC...ATGAAAGGGTGTTTTGCCAACATTTCCCGAGCTTTCTAACCCCTTTCTAATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR GCA 90 bp ACACCAGATGATGCCCAAGGTGTTTTCATGACAAGTACCCACACGAGATCTCTTGGTGGGAAGAAACTCTaGTGGATCTACTCACCTGCA +
Preference number: 4 (lower is better)
Translates to: TPDDAQGVFMTSTHTRSLGGKKL*WIYSPA
Trigger: TGCAGGTGAGTAGATCCAGCAGAGTTTCTTCCCACC...AAGAGATCTCGTGTGGGTACTTGTCATGAAAACACCTTGGGCATCATCTGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp GGATTCTTTCACCTGAAAAACGGAGTCCAAATCTGGGGCAGGCAAATAATGAAACATCTCTGCAACCTCTaGCTCCCAGGTTCGGGTGAT +
Preference number: 4 (lower is better)
Translates to: GFFHLKNGVQIWGRQIMKHLCNL*LPGSGD
Trigger: ATCACCCGAACCTGGGAGGCAGAGGTTGCAGAGATG...TTTCATTATTTGCCTGCCCCAGATTTGGACTCCGTTTTTCAGGTGAAAGAATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR GCA 90 bp GCTGTGCTCGTGAAAGTAATGAGTCACAGAGTAGTGACGAAAGAGAACGATGCTGACGAAAGAGAACGATaGTGTTCAGACCCGAACCTC +
Preference number: 4 (lower is better)
Translates to: AVLVKVMSHRVVTKENDADERER*CSDPNL
Trigger: GAGGTTCGGGTCTGAACAGCATCGTTCTCTTTCGTC...AGCATCGTTCTCTTTCGTCACTACTCTGTGACTCATTACTTTCACGAGCACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR GCA 90 bp GAACCTGTAATAAAACACTCTACAGTCTTCCTGTGGCCACACACTCCTGAGAGATGTCACTGGCATTACTaGCTAAGCTCCACCTCCTGT +
Preference number: 4 (lower is better)
Translates to: EPVIKHSTVFLWPHTPERCHWHY*LSSTSC
Trigger: ACAGGAGGTGGAGCTTAGGCAGTAATGCCAGTGACA...TCTCTCAGGAGTGTGTGGCCACAGGAAGACTGTAGAGTGTTTTATTACAGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR GCA 90 bp TCTGCTAGTTACCACCAGGAAGATCAGATCATAACATGGACGCATGGTATGTTAGCTCTCTTCTTGGCTTaGAGACGGCCACCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: SASYHQEDQIITWTHGMLALFLA*RRPPSH
Trigger: GTGAGAAGGTGGCCGTCTGCAAGCCAAGAAGAGAGC...TAACATACCATGCGTCCATGTTATGATCTGATCTTCCTGGTGGTAACTAGCAGA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR CCA 90 bp TCTAGAGTTGGTGGGAAGAAACTCTGCTGGATCTACTCACCTGCAGATCTTCCAGAAGCGTCACTGTGCTaGTACTTCCAAAAATCCCGA +
Preference number: 4 (lower is better)
Translates to: SRVGGKKLCWIYSPADLPEASLC*YFQKSR
Trigger: TCGGGATTTTTGGAAGTACCAGCACAGTGACGCTTC...TGGAAGATCTGCAGGTGAGTAGATCCAGCAGAGTTTCTTCCCACCAACTCTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp AGTACTTCTAAAAAGCTCAACAGCCTTCCAGGATTGGAGAAGTCCCATAACCTGTGCTGCTGCAGGAGCTaGATCTTCTCCAGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: STSKKLNSLPGLEKSHNLCCCRS*IFSSSF
Trigger: GAAGGAACTGGAGAAGATCCAGCTCCTGCAGCAGCA...CAGGTTATGGGACTTCTCCAATCCTGGAAGGCTGTTGAGCTTTTTAGAAGTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp AGCTCGGGAAATGTTGGCAAAACACCCTTTCATCATGCAAGGAAGAGACAGAATACGTCCTGGAAGAACTaGAGCTGCTTCTCTAGGCTC +
Preference number: 4 (lower is better)
Translates to: SSGNVGKTPFHHARKRQNTSWKN*SCFSRL
Trigger: GAGCCTAGAGAAGCAGCTCCAGTTCTTCCAGGACGT...ATTCTGTCTCTTCCTTGCATGATGAAAGGGTGTTTTGCCAACATTTCCCGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR CCA 90 bp CACAGCTTTAGGGACACTGAAAAGGAATACTGTATCCACCAAACACACACACAGAGTTTATCCAGTAGATaGCTGGGGGTGCTACTCGCG +
Preference number: 4 (lower is better)
Translates to: HSFRDTEKEYCIHQTHTQSLSSR*LGVLLA
Trigger: CGCGAGTAGCACCCCCAGCCATCTACTGGATAAACT...CTGTGTGTGTGTTTGGTGGATACAGTATTCCTTTTCAGTGTCCCTAAAGCTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp TCTAGAGTTGGTGGGAAGAAACTCTGCTGGATCTACTCACCTGCAGATCTTCCACTGTTAAATCACTCGTaGCACCTTCTCCACCTTCTG +
Preference number: 4 (lower is better)
Translates to: SRVGGKKLCWIYSPADLPLLNHS*HLLHLL
Trigger: CAGAAGGTGGAGAAGGTGCCACGAGTGATTTAACAG...TGGAAGATCTGCAGGTGAGTAGATCCAGCAGAGTTTCTTCCCACCAACTCTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp TTAAGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCATCACTAGAAATCACCTaGGTACTCCCAAAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: LRLLQWEAHCSHVLCGFPSLEIT*VLPKRK
Trigger: TTTTCTCTTTGGGAGTACCCAGGTGATTTCTAGTGA...TGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp GGGAAACCAGAATTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTCAACAAGAGAAATTCTaGCACACGTGCCCAAGAGAG +
Preference number: 4 (lower is better)
Translates to: GKPEFSRLELDTPDDAQGQQEKF*HTCPRE
Trigger: CTCTCTTGGGCACGTGTGCCAGAATTTCTCTTGTTG...ACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAATTCTGGTTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp TCTAGAGTTGGTGGGAAGAAACTCTGCTGGATCTACTCACCTGCAGATCTTCCAGGGAAGAAACTCTGCTaGATCTACTCACCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: SRVGGKKLCWIYSPADLPGKKLC*IYSPAD
Trigger: ATCTGCAGGTGAGTAGATCCAGCAGAGTTTCTTCCC...TGGAAGATCTGCAGGTGAGTAGATCCAGCAGAGTTTCTTCCCACCAACTCTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp TCTGTGATCAATGAGAAATCTCACACTGCAGGACGACACCCTCTGAACTCCGTCCAGTCACGTTCTTTGTaGCTTTCCAACGTCTACAGA +
Preference number: 4 (lower is better)
Translates to: SVINEKSHTAGRHPLNSVQSRSL*LSNVYR
Trigger: TCTGTAGACGTTGGAAAGCCACAAAGAACGTGACTG...GACGGAGTTCAGAGGGTGTCGTCCTGCAGTGTGAGATTTCTCATTGATCACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp GAGATTAGAAAGGGGTTAGAAAGCTCGGGAAATGTTGGCAAAACACCCTTTCATCCATGTCATGGCCACTaGGTCTCCTCCCCAGCATTT +
Preference number: 4 (lower is better)
Translates to: EIRKGLESSGNVGKTPFHPCHGH*VSSPAF
Trigger: AAATGCTGGGGAGGAGACCCAGTGGCCATGACATGG...ATGAAAGGGTGTTTTGCCAACATTTCCCGAGCTTTCTAACCCCTTTCTAATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR CCA 90 bp GAACCTGTAATAAAACACTCTACAGTCTTCCTGTGGCCACACACTCCTGAGAGATCTACAGTCTTCCTGTaGCCACACACTCCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: EPVIKHSTVFLWPHTPERSTVFL*PHTPER
Trigger: TCTCTCAGGAGTGTGTGGCCACAGGAAGACTGTAGA...TCTCTCAGGAGTGTGTGGCCACAGGAAGACTGTAGAGTGTTTTATTACAGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR TCA 90 bp GGGAAACCAGAATTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTCACATCTGTGATCAATaGGAAATCTCACACTGCAGG +
Preference number: 4 (lower is better)
Translates to: GKPEFSRLELDTPDDAQGHICDQ*EISHCR
Trigger: CCTGCAGTGTGAGATTTCTCATTGATCACAGATGTG...ACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAATTCTGGTTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp GAGATTAGAAAGGGGTTAGAAAGCTCGGGAAATGTTGGCAAAACACCCTTTCATCAGCCTCTTCATTTCTaGGACCTGCAGACACAACCC +
Preference number: 4 (lower is better)
Translates to: EIRKGLESSGNVGKTPFHQPLHF*DLQTQP
Trigger: GGGTTGTGTCTGCAGGTCTCAGAAATGAAGAGGCTG...ATGAAAGGGTGTTTTGCCAACATTTCCCGAGCTTTCTAACCCCTTTCTAATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR TCA 90 bp GCCGCAACACGATATGTGATGGTGCAGAGCTGTTCTGGCCTGAAAAGAACTTTCATACATGAACACTCTTaGGGGGATGGTGATTTTTGG +
Preference number: 4 (lower is better)
Translates to: AATRYVMVQSCSGLKRTFIHEHS*GDGDFW
Trigger: CCAAAAATCACCATCCCCTCAAGAGTGTTCATGTAT...GAAAGTTCTTTTCAGGCCAGAACAGCTCTGCACCATCACATATCGTGTTGCGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp CTACAGACCAAACAGCTAAGCCGCAACACGATATGTGATGGTGCAGAGCTGTTCAGAATGTTCTATACATaGACACTCTTGAGGGGATGG +
Preference number: 4 (lower is better)
Translates to: LQTKQLSRNTICDGAELFRMFYT*TLLRGW
Trigger: CCATCCCCTCAAGAGTGTTCATGTATAGAACATTCT...GAACAGCTCTGCACCATCACATATCGTGTTGCGGCTTAGCTGTTTGGTCTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp CGGCACCCTATATCCTGCCTAGCTCAATACACTAAGTGCTCAAATAAAATACATCCAATGGGCACACCATaGGGACCCAAGGAAAGGACA +
Preference number: 4 (lower is better)
Translates to: RHPISCLAQYTKCSNKIHPMGTP*GPKERT
Trigger: TGTCCTTTCCTTGGGTCCTCATGGTGTGCCCATTGG...ATGTATTTTATTTGAGCACTTAGTGTATTGAGCTAGGCAGGATATAGGGTGCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp GAAAAGCCAATGTCCTCACACCAGCCACTAGGCCCTACACCAGTGGTATCCGTACAATGTGTGACCTTCTaGCATATGCCAATATTTTTC +
Preference number: 4 (lower is better)
Translates to: EKPMSSHQPLGPTPVVSVQCVTF*HMPIFF
Trigger: GAAAAATATTGGCATATGTCAGAAGGTCACACATTG...TACGGATACCACTGGTGTAGGGCCTAGTGGCTGGTGTGAGGACATTGGCTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR TCA 90 bp GCTGTGCTCGTGAAAGTAATGAGTCACAGAGTAGTGACGAAAGAGAACGATGCTAAAGCGAGCACCTGTTaGGTCACTCACCTGTTCAAT +
Preference number: 4 (lower is better)
Translates to: AVLVKVMSHRVVTKENDAKASTC*VTHLFN
Trigger: ATTGAACAGGTGAGTGACTCAACAGGTGCTCGCTTT...AGCATCGTTCTCTTTCGTCACTACTCTGTGACTCATTACTTTCACGAGCACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR TCA 90 bp GAACCTGTAATAAAACACTCTACAGTCTTCCTGTGGCCACACACTCCTGAGAGATTAATCCCAGCACTTTaGGAGGCAGATCACTTGAGG +
Preference number: 4 (lower is better)
Translates to: EPVIKHSTVFLWPHTPERLIPAL*EADHLR
Trigger: CCTCAAGTGATCTGCCTCTCAAAGTGCTGGGATTAA...TCTCTCAGGAGTGTGTGGCCACAGGAAGACTGTAGAGTGTTTTATTACAGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR TCA 90 bp AAAAGGGTTTGCCTGTTTTGTTCACTTGCTGTATCCTCAGGACCTAGAGTAGCATGGAAGCTGGAAGTCTaGGATTGGTTTCTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: KRVCLFCSLAVSSGPRVAWKLEV*DWFLVR
Trigger: CCTCACCAGAAACCAATCTCAGACTTCCAGCTTCCA...TGCTACTCTAGGTCCTGAGGATACAGCAAGTGAACAAAACAGGCAAACCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR GCA 90 bp ACACCAGATGATGCCCAAGGTGTTTTCATGACAAGTACCCACACGAGATCTCTTCAGGAAGCGTCACTGTaGTGGTACTTCCAAAAATCC +
Preference number: 4 (lower is better)
Translates to: TPDDAQGVFMTSTHTRSLQEASL*WYFQKS
Trigger: GGATTTTTGGAAGTACCAGCACAGTGACGCTTCCTG...AAGAGATCTCGTGTGGGTACTTGTCATGAAAACACCTTGGGCATCATCTGGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp AGTACTTCTAAAAAGCTCAACAGCCTTCCAGGATTGGAGAAGTCCCATAACCTGTCTGAGGCCCTCCTTTaGAGACATCATGACCGTAAG +
Preference number: 4 (lower is better)
Translates to: STSKKLNSLPGLEKSHNLSEALL*RHHDRK
Trigger: CTTACGGTCATGATGTCTGCAAAGGAGGGCCTCAGA...CAGGTTATGGGACTTCTCCAATCCTGGAAGGCTGTTGAGCTTTTTAGAAGTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp GACAGAGAAAGGAACGGCTCTGGGAAAGCCAAACCTGGCCAAAGTCCAACTTCCCAATTAATCTCTCACTaGAGCAAGAAAAGAATTGCC +
Preference number: 4 (lower is better)
Translates to: DRERNGSGKAKPGQSPTSQLISH*SKKRIA
Trigger: GGCAATTCTTTTCTTGCTGCAGTGAGAGATTAATTG...GGAAGTTGGACTTTGGCCAGGTTTGGCTTTCCCAGAGCCGTTCCTTTCTCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp CGGCACCCTATATCCTGCCTAGCTCAATACACTAAGTGCTCAAATAAAATACATCAGTGGGAGGCTCACTaGAGTCACGTTCTTTGTGGC +
Preference number: 4 (lower is better)
Translates to: RHPISCLAQYTKCSNKIHQWEAH*SHVLCG
Trigger: GCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTG...ATGTATTTTATTTGAGCACTTAGTGTATTGAGCTAGGCAGGATATAGGGTGCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp ACAGAACACGGACAAATTTGCCACGCTCACATCCTGAACAATACATTTTGTGAATCCCACAGCTCCACTTaGTCAAGGAAGTCTCGGTGC +
Preference number: 4 (lower is better)
Translates to: TEHGQICHAHILNNTFCESHSST*SRKSRC
Trigger: GCACCGAGACTTCCTTGAGCAAGTGGAGCTGTGGGA...TTCACAAAATGTATTGTTCAGGATGTGAGCGTGGCAAATTTGTCCGTGTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR GCA 90 bp ACAGAACACGGACAAATTTGCCACGCTCACATCCTGAACAATACATTTTGTGAACTCACCTCGAACCCATaGGGGATCTTCCAAGAGTGC +
Preference number: 4 (lower is better)
Translates to: TEHGQICHAHILNNTFCELTSNP*GIFQEC
Trigger: GCACTCTTGGAAGATCCCGCATGGGTTCGAGGTGAG...TTCACAAAATGTATTGTTCAGGATGTGAGCGTGGCAAATTTGTCCGTGTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR GCA 90 bp AATAAGACACACACTGAAAGAAAATCACAGTATTGCCTCCAATGCAATAGTTACCCGGGAGGCGGAGGTTaGAGTGAGCTGAGACCACAC +
Preference number: 4 (lower is better)
Translates to: NKTHTERKSQYCLQCNSYPGGGG*SELRPH
Trigger: GTGTGGTCTCAGCTCACTGCAACCTCCGCCTCCCGG...GTAACTATTGCATTGGAGGCAATACTGTGATTTTCTTTCAGTGTGTGTCTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR GCA 90 bp ACCTCGAACCCATGCGGGATCTTCCAAGAGTGCAATTCCCACAGCTCCACTTGCAGAAAATCACAGTATTaGCTCCAATGCAATAGTTAC +
Preference number: 4 (lower is better)
Translates to: TSNPCGIFQECNSHSSTCRKSQY*LQCNSY
Trigger: GTAACTATTGCATTGGAGGCAATACTGTGATTTTCT...GCAAGTGGAGCTGTGGGAATTGCACTCTTGGAAGATCCCGCATGGGTTCGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR GCA 90 bp TTAAGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCACCAGCATTTACAAACTaGTTACCTTATTTCTCATGG +
Preference number: 4 (lower is better)
Translates to: LRLLQWEAHCSHVLCGFPPAFTN*LPYFSW
Trigger: CCATGAGAAATAAGGTAAGCAGTTTGTAAATGCTGG...TGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR GCA 90 bp GAACCTGTAATAAAACACTCTACAGTCTTCCTGTGGCCACACACTCCTGAGAGACTCCCTTTCCAGGTCTaGTTCCTGTTTCTAGTCATC +
Preference number: 4 (lower is better)
Translates to: EPVIKHSTVFLWPHTPERLPFQV*FLFLVI
Trigger: GATGACTAGAAACAGGAAGCAGACCTGGAAAGGGAG...TCTCTCAGGAGTGTGTGGCCACAGGAAGACTGTAGAGTGTTTTATTACAGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR GCA 90 bp AAAAGGGTTTGCCTGTTTTGTTCACTTGCTGTATCCTCAGGACCTAGAGTAGCAGCCTCCTTGAGCTCTTaGTCAAATGACACCTTCTCC +
Preference number: 4 (lower is better)
Translates to: KRVCLFCSLAVSSGPRVAASLSS*SNDTFS
Trigger: GGAGAAGGTGTCATTTGAGCAAGAGCTCAAGGAGGC...TGCTACTCTAGGTCCTGAGGATACAGCAAGTGAACAAAACAGGCAAACCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR CCA 90 bp GAACCTGTAATAAAACACTCTACAGTCTTCCTGTGGCCACACACTCCTGAGAGAGAAGCGTCACTGTGCTaGTACTTCCAAAAATCCCGA +
Preference number: 4 (lower is better)
Translates to: EPVIKHSTVFLWPHTPEREASLC*YFQKSR
Trigger: TCGGGATTTTTGGAAGTACCAGCACAGTGACGCTTC...TCTCTCAGGAGTGTGTGGCCACAGGAAGACTGTAGAGTGTTTTATTACAGGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR CCA 90 bp AGTACTTCTAAAAAGCTCAACAGCCTTCCAGGATTGGAGAAGTCCCATAACCTGGGTAGACGCAGACAGTaGGGTTTCATGGTGTCCTAT +
Preference number: 4 (lower is better)
Translates to: STSKKLNSLPGLEKSHNLGRRRQ*GFMVSY
Trigger: ATAGGACACCATGAAACCCCACTGTCTGCGTCTACC...CAGGTTATGGGACTTCTCCAATCCTGGAAGGCTGTTGAGCTTTTTAGAAGTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp ACACCAGATGATGCCCAAGGTGTTTTCATGACAAGTACCCACACGAGATCTCTTCTTCCCCACACACTTTaGTTTCTTTGTGGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: TPDDAQGVFMTSTHTRSLLPHTL*FLCGSN
Trigger: GTTGCTGCCACAAAGAAACCAAAGTGTGTGGGGAAG...AAGAGATCTCGTGTGGGTACTTGTCATGAAAACACCTTGGGCATCATCTGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp TTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTGTTTTCATGACAGAATTTCGGCTCACCTaGAGAGGATGCCTGATGACT +
Preference number: 4 (lower is better)
Translates to: FSRLELDTPDDAQGVFMTEFRLT*RGCLMT
Trigger: AGTCATCAGGCATCCTCTCCAGGTGAGCCGAAATTC...TGTCATGAAAACACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp AATAAGACACACACTGAAAGAAAATCACAGTATTGCCTCCAATGCAATAGTTACAACCGGCAGGGCAAGTaGCAGAAGCCAGCTCTCGGG +
Preference number: 4 (lower is better)
Translates to: NKTHTERKSQYCLQCNSYNRQGK*QKPALG
Trigger: CCCGAGAGCTGGCTTCTGCCACTTGCCCTGCCGGTT...GTAACTATTGCATTGGAGGCAATACTGTGATTTTCTTTCAGTGTGTGTCTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR CCA 90 bp GCTGTGCTCGTGAAAGTAATGAGTCACAGAGTAGTGACGAAAGAGAACGATGCTCCCTCCAAATGGATGTaGGCTCACAGCACATTACTA +
Preference number: 4 (lower is better)
Translates to: AVLVKVMSHRVVTKENDAPSKWM*AHSTLL
Trigger: TAGTAATGTGCTGTGAGCCCACATCCATTTGGAGGG...AGCATCGTTCTCTTTCGTCACTACTCTGTGACTCATTACTTTCACGAGCACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR CCA 90 bp GAACCTGTAATAAAACACTCTACAGTCTTCCTGTGGCCACACACTCCTGAGAGAAGAATGAGCGAGCTCTaGTCTCTCCCTTCTCATAAG +
Preference number: 4 (lower is better)
Translates to: EPVIKHSTVFLWPHTPERRMSEL*SLPSHK
Trigger: CTTATGAGAAGGGAGAGACCAGAGCTCGCTCATTCT...TCTCTCAGGAGTGTGTGGCCACAGGAAGACTGTAGAGTGTTTTATTACAGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR TCA 90 bp GGGAAACCAGAATTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTGCTAAAACAGGGAGATaGCACAAAATTGGGTCACTA +
Preference number: 4 (lower is better)
Translates to: GKPEFSRLELDTPDDAQGAKTGR*HKIGSL
Trigger: TAGTGACCCAATTTTGTGTCATCTCCCTGTTTTAGC...ACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAATTCTGGTTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp ACACCAGATGATGCCCAAGGTGTTTTCATGACAAGTACCCACACGAGATCTCTTATTGGGTTTAAAAGATaGTGTCCAACCTGGGAGGGT +
Preference number: 4 (lower is better)
Translates to: TPDDAQGVFMTSTHTRSLIGFKR*CPTWEG
Trigger: ACCCTCCCAGGTTGGACATCATCTTTTAAACCCAAT...AAGAGATCTCGTGTGGGTACTTGTCATGAAAACACCTTGGGCATCATCTGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp CTTTCACCTGAAAAACGGAGTCCAAATCTGGGGCAGGCAAATAATGAAACCCTCGTTACCAATCCAAGGTaGGGTGCTCAAGTTCAAAAC +
Preference number: 4 (lower is better)
Translates to: LSPEKRSPNLGQANNETLVTNPR*GAQVQN
Trigger: GTTTTGAACTTGAGCACCTCACCTTGGATTGGTAAC...GAGGGTTTCATTATTTGCCTGCCCCAGATTTGGACTCCGTTTTTCAGGTGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR TCA 90 bp CCCTCCAAATGGATGTGGGCTCACAGCACATTACTAGTCCCTCTCATGAGTGGTGTTAATTCTTATGTTTaGCTAAGTAACGGAGAGGAC +
Preference number: 4 (lower is better)
Translates to: PSKWMWAHSTLLVPLMSGVNSYV*LSNGED
Trigger: GTCCTCTCCGTTACTTAGTCAAACATAAGAATTAAC...ACCACTCATGAGAGGGACTAGTAATGTGCTGTGAGCCCACATCCATTTGGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR TCA 90 bp TCTGCTAGTTACCACCAGGAAGATCAGATCATAACATGGACGCATGGTATGTTAGAGGTGAGCAGTGAGTaGGCAAGCAAAGCTTCATCT +
Preference number: 4 (lower is better)
Translates to: SASYHQEDQIITWTHGMLEVSSE*ASKASS
Trigger: AGATGAAGCTTTGCTTGCTCACTCACTGCTCACCTC...TAACATACCATGCGTCCATGTTATGATCTGATCTTCCTGGTGGTAACTAGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR TCA 90 bp CACCAGGAAGATCAGATCATAACATGGACGCATGGTATGTTAAGTAAGAAAGAACCACACAGCAAGAGGTaGGCAGTGAGTGAGCAAGCA +
Preference number: 4 (lower is better)
Translates to: HQEDQIITWTHGMLSKKEPHSKR*AVSEQA
Trigger: TGCTTGCTCACTCACTGCTCACCTCTTGCTGTGTGG...TTCTTTCTTACTTAACATACCATGCGTCCATGTTATGATCTGATCTTCCTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR TCA 90 bp CCCTCCAAATGGATGTGGGCTCACAGCACATTACTAGTCCCTCTCATGAGTGGTTCACTACTAAGTAACTaGTTTCCTGTTTTCCCACTA +
Preference number: 4 (lower is better)
Translates to: PSKWMWAHSTLLVPLMSGSLLSN*FPVFPL
Trigger: TAGTGGGAAAACAGGAAATCAGTTACTTAGTAGTGA...ACCACTCATGAGAGGGACTAGTAATGTGCTGTGAGCCCACATCCATTTGGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR GCA 90 bp AGCTCGGGAAATGTTGGCAAAACACCCTTTCATCATGCAAGGAAGAGACAGAATCAGGAAGCGTCACTGTaGTGGTACTTCCAAAAATCC +
Preference number: 4 (lower is better)
Translates to: SSGNVGKTPFHHARKRQNQEASL*WYFQKS
Trigger: GGATTTTTGGAAGTACCAGCACAGTGACGCTTCCTG...ATTCTGTCTCTTCCTTGCATGATGAAAGGGTGTTTTGCCAACATTTCCCGAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR GCA 90 bp ACACCAGATGATGCCCAAGGTGTTTTCATGACAAGTACCCACACGAGATCTCTTACATGTGTTGGGACCTaGAGGACTGGATCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: TPDDAQGVFMTSTHTRSLTCVGT*RTGSSF
Trigger: AAAAGAAGATCCAGTCCTGCAGGTCCCAACACATGT...AAGAGATCTCGTGTGGGTACTTGTCATGAAAACACCTTGGGCATCATCTGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp ACACCAGATGATGCCCAAGGTGTTTTCATGACAAGTACCCACACGAGATCTCTTGGAAAGCAGAAGTTTTaGCTGTCTTGTTCATCGCTG +
Preference number: 4 (lower is better)
Translates to: TPDDAQGVFMTSTHTRSLGKQKF*LSCSSL
Trigger: CAGCGATGAACAAGACAGGCAAAACTTCTGCTTTCC...AAGAGATCTCGTGTGGGTACTTGTCATGAAAACACCTTGGGCATCATCTGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp AACACCCTTTCATCATGCAAGGAAGAGACAGAATGTGAGTGTTGGTTTTTGGTAAGATCGAGACCATCCTaGCTAACATGGGGAAACCCC +
Preference number: 4 (lower is better)
Translates to: NTLSSCKEETECECWFLVRSRPS*LTWGNP
Trigger: GGGGTTTCCCCATGTTAGGCAGGATGGTCTCGATCT...TACCAAAAACCAACACTCACATTCTGTCTCTTCCTTGCATGATGAAAGGGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR GCA 90 bp GAAAAGCCAATGTCCTCACACCAGCCACTAGGCCCTACACCAGTGGTATCCGTAACAGATGACATTACTTaGAGAAATGAAGACTTGGAA +
Preference number: 4 (lower is better)
Translates to: EKPMSSHQPLGPTPVVSVTDDIT*RNEDLE
Trigger: TTCCAAGTCTTCATTTCTGCAAGTAATGTCATCTGT...TACGGATACCACTGGTGTAGGGCCTAGTGGCTGGTGTGAGGACATTGGCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR GCA 90 bp GAACCTGTAATAAAACACTCTACAGTCTTCCTGTGGCCACACACTCCTGAGAGAAAGGTTGGGCACTGCTaGTATACAGTATCTCTCACA +
Preference number: 4 (lower is better)
Translates to: EPVIKHSTVFLWPHTPERKVGHC*YTVSLT
Trigger: TGTGAGAGATACTGTATAGCAGCAGTGCCCAACCTT...TCTCTCAGGAGTGTGTGGCCACAGGAAGACTGTAGAGTGTTTTATTACAGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR CCA 90 bp CGGCACCCTATATCCTGCCTAGCTCAATACACTAAGTGCTCAAATAAAATACATAGAAAGGAACGGCTCTaGGAAAGCCAAACCTGGCCA +
Preference number: 4 (lower is better)
Translates to: RHPISCLAQYTKCSNKIHRKERL*ESQTWP
Trigger: TGGCCAGGTTTGGCTTTCCCAGAGCCGTTCCTTTCT...ATGTATTTTATTTGAGCACTTAGTGTATTGAGCTAGGCAGGATATAGGGTGCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp TGTGAACAGATGCCAGGCAGTAGTTACCAATCCAAGGTGAGGTGCTCAAGTTCAAACGGAGTCCAAATCTaGGGCAGGCAAATAATGAAA +
Preference number: 4 (lower is better)
Translates to: CEQMPGSSYQSKVRCSSSNGVQI*GRQIMK
Trigger: TTTCATTATTTGCCTGCCCCAGATTTGGACTCCGTT...TGAACTTGAGCACCTCACCTTGGATTGGTAACTACTGCCTGGCATCTGTTCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR CCA 90 bp CCCTCCAAATGGATGTGGGCTCACAGCACATTACTAGTCCCTCTCATGAGTGGTCATGCAAGTGTAGTGTaGCATGTTTCTTATGAGAAT +
Preference number: 4 (lower is better)
Translates to: PSKWMWAHSTLLVPLMSGHASVV*HVSYEN
Trigger: ATTCTCATAAGAAACATGCCACACTACACTTGCATG...ACCACTCATGAGAGGGACTAGTAATGTGCTGTGAGCCCACATCCATTTGGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR CCA 90 bp CCCTCCAAATGGATGTGGGCTCACAGCACATTACTAGTCCCTCTCATGAGTGGTGCTTATGAATGGCAGTaGAAGGATGACACAAATATT +
Preference number: 4 (lower is better)
Translates to: PSKWMWAHSTLLVPLMSGAYEWQ*KDDTNI
Trigger: AATATTTGTGTCATCCTTCCACTGCCATTCATAAGC...ACCACTCATGAGAGGGACTAGTAATGTGCTGTGAGCCCACATCCATTTGGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR CCA 90 bp GAACCTGTAATAAAACACTCTACAGTCTTCCTGTGGCCACACACTCCTGAGAGAGCTTCAGCTTATGAATaGCAGTGGAAGGATGACACA +
Preference number: 4 (lower is better)
Translates to: EPVIKHSTVFLWPHTPERASAYE*QWKDDT
Trigger: TGTGTCATCCTTCCACTGCCATTCATAAGCTGAAGC...TCTCTCAGGAGTGTGTGGCCACAGGAAGACTGTAGAGTGTTTTATTACAGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR CCA 90 bp TCTGCTAGTTACCACCAGGAAGATCAGATCATAACATGGACGCATGGTATGTTACACCATGTCCTCACATaGTGGAGAGAGAATGAGCGA +
Preference number: 4 (lower is better)
Translates to: SASYHQEDQIITWTHGMLHHVLT*WRENER
Trigger: TCGCTCATTCTCTCTCCACCATGTGAGGACATGGTG...TAACATACCATGCGTCCATGTTATGATCTGATCTTCCTGGTGGTAACTAGCAGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR CAA 72 bp TTCTCTCTCATCACAAGTTTTAGGAAAGCAGAAGTTTaGCCTGTCTTGTTCATCGCTGTATCTCCGGCACCC +
Preference number: 4 (lower is better)
Translates to: FSLITSFRKAEV*PVLFIAVSPAP
Trigger: GGGTGCCGGAGATACAGCGATGAACAAGACAGGCAAAACTTCTGCTTTCCTAAAACTTGTGATGAGAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp AGCTCGGGAAATGTTGGCAAAACACCCTTTCATCATGCAAGGAAGAGACAGAATACTTCCATCCAGCGTTaGCACAAACAACAAGGTTTC +
Preference number: 4 (lower is better)
Translates to: SSGNVGKTPFHHARKRQNTSIQR*HKQQGF
Trigger: GAAACCTTGTTGTTTGTGTCAACGCTGGATGGAAGT...ATTCTGTCTCTTCCTTGCATGATGAAAGGGTGTTTTGCCAACATTTCCCGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR TCA 90 bp AAGACTCAAGAAGCAACAAGAGAAATTCTGGCACACGTGCCCAAGAGAGGTTTACATTGGGCATGGATATaGGGATGTTGTGTGGCTTTA +
Preference number: 4 (lower is better)
Translates to: KTQEATREILAHVPKRGLHWAWI*GCCVAL
Trigger: TAAAGCCACACAACATCCTCATATCCATGCCCAATG...TAAACCTCTCTTGGGCACGTGTGCCAGAATTTCTCTTGTTGCTTCTTGAGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp CGGCACCCTATATCCTGCCTAGCTCAATACACTAAGTGCTCAAATAAAATACATAATTCCGGTCTCCAGTaGAGGCTGTACTTGGTGCAT +
Preference number: 4 (lower is better)
Translates to: RHPISCLAQYTKCSNKIHNSGLQ*RLYLVH
Trigger: ATGCACCAAGTACAGCCTTCACTGGAGACCGGAATT...ATGTATTTTATTTGAGCACTTAGTGTATTGAGCTAGGCAGGATATAGGGTGCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp ACACCAGATGATGCCCAAGGTGTTTTCATGACAAGTACCCACACGAGATCTCTTATACATGAACACTCTTaGGGGGATGGTGATTTTTGG +
Preference number: 4 (lower is better)
Translates to: TPDDAQGVFMTSTHTRSLIHEHS*GDGDFW
Trigger: CCAAAAATCACCATCCCCTCAAGAGTGTTCATGTAT...AAGAGATCTCGTGTGGGTACTTGTCATGAAAACACCTTGGGCATCATCTGGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp AAGACTCAAGAAGCAACAAGAGAAATTCTGGCACACGTGCCCAAGAGAGGTTTAAGAAGTCCCATAACCTaGACTACAGACCAAACAGCT +
Preference number: 4 (lower is better)
Translates to: KTQEATREILAHVPKRGLRSPIT*TTDQTA
Trigger: AGCTGTTTGGTCTGTAGTTCAGGTTATGGGACTTCT...TAAACCTCTCTTGGGCACGTGTGCCAGAATTTCTCTTGTTGCTTCTTGAGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp GGGAAACCAGAATTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTATTGCCAAAGATAACTaGATCGCATGCACACAAAAC +
Preference number: 4 (lower is better)
Translates to: GKPEFSRLELDTPDDAQGIAKDN*IACTQN
Trigger: GTTTTGTGTGCATGCGATTCAGTTATCTTTGGCAAT...ACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAATTCTGGTTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp AGTACTTCTAAAAAGCTCAACAGCCTTCCAGGATTGGAGAAGTCCCATAACCTGCAAAGTCCAACTTCCTaGAAAGAAAGCAGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: STSKKLNSLPGLEKSHNLQSPTS*KESSQE
Trigger: CTCTTGGCTGCTTTCTTTTCAGGAAGTTGGACTTTG...CAGGTTATGGGACTTCTCCAATCCTGGAAGGCTGTTGAGCTTTTTAGAAGTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp CACAGCTTTAGGGACACTGAAAAGGAATACTGTATCCACCAAACACACACACAGCAAAGTCCAACTTCCTaGAAAGAAAGCAGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: HSFRDTEKEYCIHQTHTQQSPTS*KESSQE
Trigger: CTCTTGGCTGCTTTCTTTTCAGGAAGTTGGACTTTG...CTGTGTGTGTGTTTGGTGGATACAGTATTCCTTTTCAGTGTCCCTAAAGCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp TGGTGCCTTCTTTCACATGTTAGCTGTCCCCATTTCACCTATCAGGAAGGAGTCTCCTCCAGAAAAAGATaGAAAGACATTTCTGATGGC +
Preference number: 4 (lower is better)
Translates to: WCLLSHVSCPHFTYQEGVSSRKR*KDISDG
Trigger: GCCATCAGAAATGTCTTTTCATCTTTTTCTGGAGGA...GACTCCTTCCTGATAGGTGAAATGGGGACAGCTAACATGTGAAAGAAGGCACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR TCA 90 bp CGTTTTGGATCTGGTAGCCTAAAGTCTCAACTCATAATGAGTCAATGTCTGGCTCCCCAAATCCACAGCTaGGTGAAGGTCATAAAGAGT +
Preference number: 4 (lower is better)
Translates to: RFGSGSLKSQLIMSQCLAPQIHS*VKVIKS
Trigger: ACTCTTTATGACCTTCACTCAGCTGTGGATTTGGGG...AGCCAGACATTGACTCATTATGAGTTGAGACTTTAGGCTACCAGATCCAAAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR TCA 90 bp TGTGAACAGATGCCAGGCAGTAGTTACCAATCCAAGGTGAGGTGCTCAAGTTCAGATCTCTTTGGTAATTaGGAGATGTGGCACCTAAAT +
Preference number: 4 (lower is better)
Translates to: CEQMPGSSYQSKVRCSSSDLFGN*EMWHLN
Trigger: ATTTAGGTGCCACATCTCTCAATTACCAAAGAGATC...TGAACTTGAGCACCTCACCTTGGATTGGTAACTACTGCCTGGCATCTGTTCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR TCA 90 bp ACTGCGTTCTGCACATCACTGTTGCCTGGTTTAACTGCAAACTTTGCTATGAGTGTTTCTATACACACATaGTCCTCAGTTCTCGGTGAC +
Preference number: 4 (lower is better)
Translates to: TAFCTSLLPGLTANFAMSVSIHT*SSVLGD
Trigger: GTCACCGAGAACTGAGGATCATGTGTGTATAGAAAC...ACTCATAGCAAAGTTTGCAGTTAAACCAGGCAACAGTGATGTGCAGAACGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR TCA 90 bp AGCTCGGGAAATGTTGGCAAAACACCCTTTCATCATGCAAGGAAGAGACAGAATTGGGGTCCCCGCATTTaGGGTATGTTTATACATGTT +
Preference number: 4 (lower is better)
Translates to: SSGNVGKTPFHHARKRQNWGPRI*GMFIHV
Trigger: AACATGTATAAACATACCTCAAATGCGGGGACCCCA...ATTCTGTCTCTTCCTTGCATGATGAAAGGGTGTTTTGCCAACATTTCCCGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR TCA 90 bp GCTGTGCTCGTGAAAGTAATGAGTCACAGAGTAGTGACGAAAGAGAACGATGCTAACGAGGTTTGCTGCTaGATTCACAAGACAATGTGT +
Preference number: 4 (lower is better)
Translates to: AVLVKVMSHRVVTKENDANEVCC*IHKTMC
Trigger: ACACATTGTCTTGTGAATTCAGCAGCAAACCTCGTT...AGCATCGTTCTCTTTCGTCACTACTCTGTGACTCATTACTTTCACGAGCACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR TCA 90 bp AAAAGGGTTTGCCTGTTTTGTTCACTTGCTGTATCCTCAGGACCTAGAGTAGCAACTGGTATCCAGGGCTaGACTAAAACATGCCAGTTT +
Preference number: 4 (lower is better)
Translates to: KRVCLFCSLAVSSGPRVATGIQG*TKTCQF
Trigger: AAACTGGCATGTTTTAGTTCAGCCCTGGATACCAGT...TGCTACTCTAGGTCCTGAGGATACAGCAAGTGAACAAAACAGGCAAACCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR GCA 90 bp TCTGCTAGTTACCACCAGGAAGATCAGATCATAACATGGACGCATGGTATGTTACAGGAAGCGTCACTGTaGTGGTACTTCCAAAAATCC +
Preference number: 4 (lower is better)
Translates to: SASYHQEDQIITWTHGMLQEASL*WYFQKS
Trigger: GGATTTTTGGAAGTACCAGCACAGTGACGCTTCCTG...TAACATACCATGCGTCCATGTTATGATCTGATCTTCCTGGTGGTAACTAGCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR GCA 90 bp AAGACTCAAGAAGCAACAAGAGAAATTCTGGCACACGTGCCCAAGAGAGGTTTAACATGTGTTGGGACCTaGAGGACTGGATCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: KTQEATREILAHVPKRGLTCVGT*RTGSSF
Trigger: AAAAGAAGATCCAGTCCTGCAGGTCCCAACACATGT...TAAACCTCTCTTGGGCACGTGTGCCAGAATTTCTCTTGTTGCTTCTTGAGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp AACACCCTTTCATCATGCAAGGAAGAGACAGAATGTGAGTGTTGGTTTTTGGTAAACAACGCACAGCCTTaGTTAGAAGACGCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: NTLSSCKEETECECWFLVNNAQP*LEDAKD
Trigger: GTCCTTGGCGTCTTCTAAGCAAGGCTGTGCGTTGTT...TACCAAAAACCAACACTCACATTCTGTCTCTTCCTTGCATGATGAAAGGGTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR GCA 90 bp CGGCACCCTATATCCTGCCTAGCTCAATACACTAAGTGCTCAAATAAAATACATCCTCTCTTGGGTTACTaGCAAAGCCCACAGGTAAAG +
Preference number: 4 (lower is better)
Translates to: RHPISCLAQYTKCSNKIHPLLGY*QSPQVK
Trigger: CTTTACCTGTGGGCTTTGGCAGTAACCCAAGAGAGG...ATGTATTTTATTTGAGCACTTAGTGTATTGAGCTAGGCAGGATATAGGGTGCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp CTTTCACCTGAAAAACGGAGTCCAAATCTGGGGCAGGCAAATAATGAAACCCTCTCGTTTGTGAACAGATaGCAGGCAGTAGTTACCAAT +
Preference number: 4 (lower is better)
Translates to: LSPEKRSPNLGQANNETLSFVNR*QAVVTN
Trigger: ATTGGTAACTACTGCCTGGCATCTGTTCACAAACGA...GAGGGTTTCATTATTTGCCTGCCCCAGATTTGGACTCCGTTTTTCAGGTGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR GCA 90 bp GAACCTGTAATAAAACACTCTACAGTCTTCCTGTGGCCACACACTCCTGAGAGACCAAATCCTGGGATTTaGATGGCTTTATCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: EPVIKHSTVFLWPHTPERPNPGI*MALSGK
Trigger: CTTTCCAGATAAAGCCATGCAAATCCCAGGATTTGG...TCTCTCAGGAGTGTGTGGCCACAGGAAGACTGTAGAGTGTTTTATTACAGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR GCA 90 bp GAACCTGTAATAAAACACTCTACAGTCTTCCTGTGGCCACACACTCCTGAGAGAAAAAAGGTTGGGCACTaGTGCTATACAGTATCTCTC +
Preference number: 4 (lower is better)
Translates to: EPVIKHSTVFLWPHTPERKKVGH*CYTVSL
Trigger: GAGAGATACTGTATAGCAGCAGTGCCCAACCTTTTT...TCTCTCAGGAGTGTGTGGCCACAGGAAGACTGTAGAGTGTTTTATTACAGGTTC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR GCA 90 bp AAAAGGGTTTGCCTGTTTTGTTCACTTGCTGTATCCTCAGGACCTAGAGTAGCAGGTGGTAAACTATCCTaGACTTGTCTCCATCTGCAT +
Preference number: 4 (lower is better)
Translates to: KRVCLFCSLAVSSGPRVAGGKLS*TCLHLH
Trigger: ATGCAGATGGAGACAAGTGCAGGATAGTTTACCACC...TGCTACTCTAGGTCCTGAGGATACAGCAAGTGAACAAAACAGGCAAACCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR CCA 90 bp CGGCACCCTATATCCTGCCTAGCTCAATACACTAAGTGCTCAAATAAAATACATCATAGTCAAAGTAGGTaGCATTCCACCGGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: RHPISCLAQYTKCSNKIHHSQSR*HSTGAL
Trigger: GAGAGCTCCGGTGGAATGCCACCTACTTTGACTATG...ATGTATTTTATTTGAGCACTTAGTGTATTGAGCTAGGCAGGATATAGGGTGCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp AACACCCTTTCATCATGCAAGGAAGAGACAGAATGTGAGTGTTGGTTTTTGGTACCAGCCCATCACCATTaGACACAAAGTGGGACATCT +
Preference number: 4 (lower is better)
Translates to: NTLSSCKEETECECWFLVPAHHH*TQSGTS
Trigger: AGATGTCCCACTTTGTGTCCAATGGTGATGGGCTGG...TACCAAAAACCAACACTCACATTCTGTCTCTTCCTTGCATGATGAAAGGGTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR CCA 90 bp CGGCACCCTATATCCTGCCTAGCTCAATACACTAAGTGCTCAAATAAAATACATGATCCCCCAACTGGCTaGAGAAAGTACATGGACAAC +
Preference number: 4 (lower is better)
Translates to: RHPISCLAQYTKCSNKIHDPPTG*RKYMDN
Trigger: GTTGTCCATGTACTTTCTCCAGCCAGTTGGGGGATC...ATGTATTTTATTTGAGCACTTAGTGTATTGAGCTAGGCAGGATATAGGGTGCCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp CGGCACCCTATATCCTGCCTAGCTCAATACACTAAGTGCTCAAATAAAATACATCTTTGGCCAAAGTGTTaGTTAAGGCTGCTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: RHPISCLAQYTKCSNKIHLWPKC*LRLLQW
Trigger: CCACTGGAGCAGCCTTAACCAACACTTTGGCCAAAG...ATGTATTTTATTTGAGCACTTAGTGTATTGAGCTAGGCAGGATATAGGGTGCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp CGGCACCCTATATCCTGCCTAGCTCAATACACTAAGTGCTCAAATAAAATACATTGCTTTCTAGGTAAGTaGGGACTCCCCATCACAGCT +
Preference number: 4 (lower is better)
Translates to: RHPISCLAQYTKCSNKIHCFLGK*GLPITA
Trigger: AGCTGTGATGGGGAGTCCCCACTTACCTAGAAAGCA...ATGTATTTTATTTGAGCACTTAGTGTATTGAGCTAGGCAGGATATAGGGTGCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp CCCTCCAAATGGATGTGGGCTCACAGCACATTACTAGTCCCTCTCATGAGTGGTAACAACCCAATAAAGTaGTTAACTTGGATGAATGTC +
Preference number: 4 (lower is better)
Translates to: PSKWMWAHSTLLVPLMSGNNPIK*LTWMNV
Trigger: GACATTCATCCAAGTTAACCACTTTATTGGGTTGTT...ACCACTCATGAGAGGGACTAGTAATGTGCTGTGAGCCCACATCCATTTGGAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR CCA 90 bp CCCTCCAAATGGATGTGGGCTCACAGCACATTACTAGTCCCTCTCATGAGTGGTGAAATTTATTTCTTATaGTTCTGGAAGCTGGAAGTC +
Preference number: 4 (lower is better)
Translates to: PSKWMWAHSTLLVPLMSGEIYFL*FWKLEV
Trigger: GACTTCCAGCTTCCAGAACCATAAGAAATAAATTTC...ACCACTCATGAGAGGGACTAGTAATGTGCTGTGAGCCCACATCCATTTGGAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR CAA 72 bp ATCACAAGTTTTAGGAAAGCAGAAGTTTTGCCTGTCTaGTTCATCGCTGTATCTCCGGCACCCTATATCCTG +
Preference number: 4 (lower is better)
Translates to: ITSFRKAEVLPV*FIAVSPAPYIL
Trigger: CAGGATATAGGGTGCCGGAGATACAGCGATGAACAAGACAGGCAAAACTTCTGCTTTCCTAAAACTTGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
3UTR CAA 72 bp AATCACTGTTTCATAAAGAAGGAGGGGAGTAGACCATaGGGTTTAAAAGATGATGTCCAACCTGGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: NHCFIKKEGSRP*GLKDDVQPGRV
Trigger: CACCCTCCCAGGTTGGACATCATCTTTTAAACCCAATGGTCTACTCCCCTCCTTCTTTATGAAACAGTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp AACACCCTTTCATCATGCAAGGAAGAGACAGAATGTGAGTGTTGGTTTTTGGTATCAATTCACGTGCAATaGCGTCTTCGTGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: NTLSSCKEETECECWFLVSIHVQ*RLRASL
Trigger: CAGAGAAGCACGAAGACGTCATTGCACGTGAATTGA...TACCAAAAACCAACACTCACATTCTGTCTCTTCCTTGCATGATGAAAGGGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR TCA 90 bp GAGATTAGAAAGGGGTTAGAAAGCTCGGGAAATGTTGGCAAAACACCCTTTCATCACAAGGTTTACATCTaGGAATGCAGAGTAGGTGAC +
Preference number: 4 (lower is better)
Translates to: EIRKGLESSGNVGKTPFHHKVYI*ECRVGD
Trigger: GTCACCTACTCTGCATTCTCAGATGTAAACCTTGTG...ATGAAAGGGTGTTTTGCCAACATTTCCCGAGCTTTCTAACCCCTTTCTAATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR TCA 90 bp TGGTGCCTTCTTTCACATGTTAGCTGTCCCCATTTCACCTATCAGGAAGGAGTCTATACACCTATCCCTTaGCGTTATGAAATGATCGAA +
Preference number: 4 (lower is better)
Translates to: WCLLSHVSCPHFTYQEGVYTPIP*RYEMIE
Trigger: TTCGATCATTTCATAACGTCAAGGGATAGGTGTATA...GACTCCTTCCTGATAGGTGAAATGGGGACAGCTAACATGTGAAAGAAGGCACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR TCA 90 bp GGATTCTTTCACCTGAAAAACGGAGTCCAAATCTGGGGCAGGCAAATAATGAAATCAGACCTATGCAAGTaGCACTATTCCATCCAGACA +
Preference number: 4 (lower is better)
Translates to: GFFHLKNGVQIWGRQIMKSDLCK*HYSIQT
Trigger: TGTCTGGATGGAATAGTGTCACTTGCATAGGTCTGA...TTTCATTATTTGCCTGCCCCAGATTTGGACTCCGTTTTTCAGGTGAAAGAATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR GCA 90 bp CGGCACCCTATATCCTGCCTAGCTCAATACACTAAGTGCTCAAATAAAATACATCTCTTGCTGACAGCATaGAAACTTCCATCCAGCGTT +
Preference number: 4 (lower is better)
Translates to: RHPISCLAQYTKCSNKIHLLLTA*KLPSSV
Trigger: AACGCTGGATGGAAGTTTGCATGCTGTCAGCAAGAG...ATGTATTTTATTTGAGCACTTAGTGTATTGAGCTAGGCAGGATATAGGGTGCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR GCA 90 bp CACCAGGAAGATCAGATCATAACATGGACGCATGGTATGTTAAGTAAGAAAGAATGTACAACCAAGGATTaGCCTGCATCTGCATGCCAC +
Preference number: 4 (lower is better)
Translates to: HQEDQIITWTHGMLSKKECTTKD*PASACH
Trigger: GTGGCATGCAGATGCAGGGCAATCCTTGGTTGTACA...TTCTTTCTTACTTAACATACCATGCGTCCATGTTATGATCTGATCTTCCTGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR CCA 90 bp TTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTGTTTTCATGACAGCGTTTTCTGAAGTCTaGTCAACCAGGTTGATAACT +
Preference number: 4 (lower is better)
Translates to: FSRLELDTPDDAQGVFMTAFSEV*STRLIT
Trigger: AGTTATCAACCTGGTTGACCAGACTTCAGAAAACGC...TGTCATGAAAACACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp CACAGCTTTAGGGACACTGAAAAGGAATACTGTATCCACCAAACACACACACAGGCGTTTTCTGAAGTCTaGTCAACCAGGTTGATAACT +
Preference number: 4 (lower is better)
Translates to: HSFRDTEKEYCIHQTHTQAFSEV*STRLIT
Trigger: AGTTATCAACCTGGTTGACCAGACTTCAGAAAACGC...CTGTGTGTGTGTTTGGTGGATACAGTATTCCTTTTCAGTGTCCCTAAAGCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp CGGCACCCTATATCCTGCCTAGCTCAATACACTAAGTGCTCAAATAAAATACATGGGAAGAAACTCTGCTaGATCTACTCACCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: RHPISCLAQYTKCSNKIHGKKLC*IYSPAD
Trigger: ATCTGCAGGTGAGTAGATCCAGCAGAGTTTCTTCCC...ATGTATTTTATTTGAGCACTTAGTGTATTGAGCTAGGCAGGATATAGGGTGCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp TCTAGAGTTGGTGGGAAGAAACTCTGCTGGATCTACTCACCTGCAGATCTTCCACTAAAAAGAGGATTTTaGGTTCCACAAAGAAGACTG +
Preference number: 4 (lower is better)
Translates to: SRVGGKKLCWIYSPADLPLKRGF*VPQRRL
Trigger: CAGTCTTCTTTGTGGAACCCAAAATCCTCTTTTTAG...TGGAAGATCTGCAGGTGAGTAGATCCAGCAGAGTTTCTTCCCACCAACTCTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp AATAAGACACACACTGAAAGAAAATCACAGTATTGCCTCCAATGCAATAGTTACAAGCTTGTCTGTGGCTaGGAAAGACCGGCAATGCCC +
Preference number: 4 (lower is better)
Translates to: NKTHTERKSQYCLQCNSYKLVCG*ERPAMP
Trigger: GGGCATTGCCGGTCTTTCCCAGCCACAGACAAGCTT...GTAACTATTGCATTGGAGGCAATACTGTGATTTTCTTTCAGTGTGTGTCTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR CCA 90 bp TGGTGCCTTCTTTCACATGTTAGCTGTCCCCATTTCACCTATCAGGAAGGAGTCGCAAAAGGAAAGATGTaGCAAAGGAAACCATTATAC +
Preference number: 4 (lower is better)
Translates to: WCLLSHVSCPHFTYQEGVAKGKM*QRKPLY
Trigger: GTATAATGGTTTCCTTTGCCACATCTTTCCTTTTGC...GACTCCTTCCTGATAGGTGAAATGGGGACAGCTAACATGTGAAAGAAGGCACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR CCA 90 bp AAAAGGGTTTGCCTGTTTTGTTCACTTGCTGTATCCTCAGGACCTAGAGTAGCAGAAAGTCCCAAATCCTaGGATTTGCATGGCTTTATC +
Preference number: 4 (lower is better)
Translates to: KRVCLFCSLAVSSGPRVAESPKS*DLHGFI
Trigger: GATAAAGCCATGCAAATCCCAGGATTTGGGACTTTC...TGCTACTCTAGGTCCTGAGGATACAGCAAGTGAACAAAACAGGCAAACCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR CCA 90 bp CACCAGGAAGATCAGATCATAACATGGACGCATGGTATGTTAAGTAAGAAAGAACAAAGCAGAATGAAGTaGCTCAGGGTGAAGATGCCC +
Preference number: 4 (lower is better)
Translates to: HQEDQIITWTHGMLSKKEQSRMK*LRVKMP
Trigger: GGGCATCTTCACCCTGAGCCACTTCATTCTGCTTTG...TTCTTTCTTACTTAACATACCATGCGTCCATGTTATGATCTGATCTTCCTGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR CAA 72 bp TACTGTGTAAGGCAGGTAAGGCTGTACTTCTTTTGTTaGAAACACTACCAAGAACAGTTCACCGTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: YCVRQVRLYFFC*KHYQEQFTVLE
Trigger: TTCCAGGACGGTGAACTGTTCTTGGTAGTGTTTCAAACAAAAGAAGTACAGCCTTACCTGCCTTACACAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR TCA 90 bp GAGATTAGAAAGGGGTTAGAAAGCTCGGGAAATGTTGGCAAAACACCCTTTCATCTCTTGAGGGGATGGTaGTTTTTGGTACCACAAAAA +
Preference number: 4 (lower is better)
Translates to: EIRKGLESSGNVGKTPFHLLRGW*FLVPQK
Trigger: TTTTTGTGGTACCAAAAATCACCATCCCCTCAAGAG...ATGAAAGGGTGTTTTGCCAACATTTCCCGAGCTTTCTAACCCCTTTCTAATCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR TCA 90 bp TTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTGTTTTCATGACAGGAAGAGACAGAATGTaGGTGTTGGTTTTTGGTAAA +
Preference number: 4 (lower is better)
Translates to: FSRLELDTPDDAQGVFMTGRDRM*VLVFGK
Trigger: TTTACCAAAAACCAACACTCACATTCTGTCTCTTCC...TGTCATGAAAACACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR TCA 90 bp GAACCTGTAATAAAACACTCTACAGTCTTCCTGTGGCCACACACTCCTGAGAGAGGAAATCCTGAAGTTTaGAGGACTCTGTTTCATTTT +
Preference number: 4 (lower is better)
Translates to: EPVIKHSTVFLWPHTPERGNPEV*RTLFHF
Trigger: AAAATGAAACAGAGTCCTTCAAACTTCAGGATTTCC...TCTCTCAGGAGTGTGTGGCCACAGGAAGACTGTAGAGTGTTTTATTACAGGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR TCA 90 bp TCTGCTAGTTACCACCAGGAAGATCAGATCATAACATGGACGCATGGTATGTTAGTCACTAGATTCTACTaGTTCTATTTCTGGCTTGCC +
Preference number: 4 (lower is better)
Translates to: SASYHQEDQIITWTHGMLVTRFY*FYFWLA
Trigger: GGCAAGCCAGAAATAGAATCAGTAGAATCTAGTGAC...TAACATACCATGCGTCCATGTTATGATCTGATCTTCCTGGTGGTAACTAGCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR CCA 90 bp TTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTGTTTTCATGACACATTTTCCCGATGTTTaGGTAGATTGTTGGGAAATC +
Preference number: 4 (lower is better)
Translates to: FSRLELDTPDDAQGVFMTHFPDV*VDCWEI
Trigger: GATTTCCCAACAATCTACCCAAACATCGGGAAAATG...TGTCATGAAAACACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp CACAGCTTTAGGGACACTGAAAAGGAATACTGTATCCACCAAACACACACACAGTCACTAGAAATCACCTaGGTACTCCCAAAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: HSFRDTEKEYCIHQTHTQSLEIT*VLPKRK
Trigger: TTTTCTCTTTGGGAGTACCCAGGTGATTTCTAGTGA...CTGTGTGTGTGTTTGGTGGATACAGTATTCCTTTTCAGTGTCCCTAAAGCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp TTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTGTTTTCATGACAAGTCATAGTGTCCTTTaGATTCCTAACAGATGTGAC +
Preference number: 4 (lower is better)
Translates to: FSRLELDTPDDAQGVFMTSHSVL*IPNRCD
Trigger: GTCACATCTGTTAGGAATCCAAAGGACACTATGACT...TGTCATGAAAACACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp AGTACTTCTAAAAAGCTCAACAGCCTTCCAGGATTGGAGAAGTCCCATAACCTGAAAGCATCCATCCCATaGAAGGATACAGTATCACTT +
Preference number: 4 (lower is better)
Translates to: STSKKLNSLPGLEKSHNLKASIP*KDTVSL
Trigger: AAGTGATACTGTATCCTTCCATGGGATGGATGCTTT...CAGGTTATGGGACTTCTCCAATCCTGGAAGGCTGTTGAGCTTTTTAGAAGTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CCA 90 bp AATAAGACACACACTGAAAGAAAATCACAGTATTGCCTCCAATGCAATAGTTACTTCGTCTTTCCGCCGTaGTGGAATCATCCGCAAGGT +
Preference number: 4 (lower is better)
Translates to: NKTHTERKSQYCLQCNSYFVFPP*WNHPQG
Trigger: ACCTTGCGGATGATTCCACCACGGCGGAAAGACGAA...GTAACTATTGCATTGGAGGCAATACTGTGATTTTCTTTCAGTGTGTGTCTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR CCA 90 bp CGTTTTGGATCTGGTAGCCTAAAGTCTCAACTCATAATGAGTCAATGTCTGGCTCTCTACTGGGACACCTaGTACATGATATCCCTATTA +
Preference number: 4 (lower is better)
Translates to: RFGSGSLKSQLIMSQCLALYWDT*YMISLL
Trigger: TAATAGGGATATCATGTACCAGGTGTCCCAGTAGAG...AGCCAGACATTGACTCATTATGAGTTGAGACTTTAGGCTACCAGATCCAAAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR CCA 90 bp GAACCTGTAATAAAACACTCTACAGTCTTCCTGTGGCCACACACTCCTGAGAGACATCATGAATACTACTaGAAATTATTAGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: EPVIKHSTVFLWPHTPERHHEYY*KLLGWA
Trigger: TGCCCAGCCTAATAATTTCCAGTAGTATTCATGATG...TCTCTCAGGAGTGTGTGGCCACAGGAAGACTGTAGAGTGTTTTATTACAGGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR CCA 90 bp CACCAGGAAGATCAGATCATAACATGGACGCATGGTATGTTAAGTAAGAAAGAAGAAGGTATTTTCTGGTaGTCACAGAGACTAGCGGAC +
Preference number: 4 (lower is better)
Translates to: HQEDQIITWTHGMLSKKEEGIFW*SQRLAD
Trigger: GTCCGCTAGTCTCTGTGACCACCAGAAAATACCTTC...TTCTTTCTTACTTAACATACCATGCGTCCATGTTATGATCTGATCTTCCTGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR TCA 90 bp AAGACTCAAGAAGCAACAAGAGAAATTCTGGCACACGTGCCCAAGAGAGGTTTAAAAGCTCTTTTTCTCTaGATCAGCAGGAATCACATT +
Preference number: 4 (lower is better)
Translates to: KTQEATREILAHVPKRGLKALFL*ISRNHI
Trigger: AATGTGATTCCTGCTGATTCAGAGAAAAAGAGCTTT...TAAACCTCTCTTGGGCACGTGTGCCAGAATTTCTCTTGTTGCTTCTTGAGTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp ACAGAACACGGACAAATTTGCCACGCTCACATCCTGAACAATACATTTTGTGAAATCCTCAGTTCTCGGTaGCTTTTTAAAAACCTCCCT +
Preference number: 4 (lower is better)
Translates to: TEHGQICHAHILNNTFCEILSSR*LFKNLP
Trigger: AGGGAGGTTTTTAAAAAGTCACCGAGAACTGAGGAT...TTCACAAAATGTATTGTTCAGGATGTGAGCGTGGCAAATTTGTCCGTGTTCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR TCA 90 bp ACTGCGTTCTGCACATCACTGTTGCCTGGTTTAACTGCAAACTTTGCTATGAGTAATATGGGCTATTGTTaGACTCTCTCTCGAATAACT +
Preference number: 4 (lower is better)
Translates to: TAFCTSLLPGLTANFAMSNMGYC*TLSRIT
Trigger: AGTTATTCGAGAGAGAGTTCAACAATAGCCCATATT...ACTCATAGCAAAGTTTGCAGTTAAACCAGGCAACAGTGATGTGCAGAACGCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR TCA 90 bp AAAAGGGTTTGCCTGTTTTGTTCACTTGCTGTATCCTCAGGACCTAGAGTAGCACAAAATAGGAAATCCTaGAGTTTGAAGGACTCTGTT +
Preference number: 4 (lower is better)
Translates to: KRVCLFCSLAVSSGPRVAQNRKS*SLKDSV
Trigger: AACAGAGTCCTTCAAACTTCAGGATTTCCTATTTTG...TGCTACTCTAGGTCCTGAGGATACAGCAAGTGAACAAAACAGGCAAACCCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR GCA 90 bp AATAAGACACACACTGAAAGAAAATCACAGTATTGCCTCCAATGCAATAGTTACATACCCACTGCGTTCTaGACATCACTGTTGCCTGGT +
Preference number: 4 (lower is better)
Translates to: NKTHTERKSQYCLQCNSYIPTAF*TSLLPG
Trigger: ACCAGGCAACAGTGATGTGCAGAACGCAGTGGGTAT...GTAACTATTGCATTGGAGGCAATACTGTGATTTTCTTTCAGTGTGTGTCTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR GCA 90 bp GCTGTGCTCGTGAAAGTAATGAGTCACAGAGTAGTGACGAAAGAGAACGATGCTAAAACTCAGGGTATCTaGACATTACCATCTTTAATC +
Preference number: 4 (lower is better)
Translates to: AVLVKVMSHRVVTKENDAKTQGI*TLPSLI
Trigger: GATTAAAGATGGTAATGTGCAGATACCCTGAGTTTT...AGCATCGTTCTCTTTCGTCACTACTCTGTGACTCATTACTTTCACGAGCACAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR CCA 90 bp CGGCACCCTATATCCTGCCTAGCTCAATACACTAAGTGCTCAAATAAAATACATGTGCCTAATGACTTGTaGAGCACTTCAAAAACTGAG +
Preference number: 4 (lower is better)
Translates to: RHPISCLAQYTKCSNKIHVPNDL*STSKTE
Trigger: CTCAGTTTTTGAAGTGCTCCACAAGTCATTAGGCAC...ATGTATTTTATTTGAGCACTTAGTGTATTGAGCTAGGCAGGATATAGGGTGCCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp CGGCACCCTATATCCTGCCTAGCTCAATACACTAAGTGCTCAAATAAAATACATTCTACAAAGGCAGAATaGGAGCTTTTGATGAGTAAC +
Preference number: 4 (lower is better)
Translates to: RHPISCLAQYTKCSNKIHSTKAE*ELLMSN
Trigger: GTTACTCATCAAAAGCTCTCATTCTGCCTTTGTAGA...ATGTATTTTATTTGAGCACTTAGTGTATTGAGCTAGGCAGGATATAGGGTGCCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR TCA 90 bp GGATTCTTTCACCTGAAAAACGGAGTCCAAATCTGGGGCAGGCAAATAATGAAATATCCCTTGACGTTATaGAATGATCGAATTCATGTC +
Preference number: 4 (lower is better)
Translates to: GFFHLKNGVQIWGRQIMKYPLTL*NDRIHV
Trigger: GACATGAATTCGATCATTTCATAACGTCAAGGGATA...TTTCATTATTTGCCTGCCCCAGATTTGGACTCCGTTTTTCAGGTGAAAGAATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR TCA 90 bp ACAGAACACGGACAAATTTGCCACGCTCACATCCTGAACAATACATTTTGTGAATATTCCATCCAGACATaGAGAAACTTTAATGCGGCT +
Preference number: 4 (lower is better)
Translates to: TEHGQICHAHILNNTFCEYSIQT*RNFNAA
Trigger: AGCCGCATTAAAGTTTCTTCATGTCTGGATGGAATA...TTCACAAAATGTATTGTTCAGGATGTGAGCGTGGCAAATTTGTCCGTGTTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR CAA 72 bp CCTGGGATTTGCATGGCTTTATCTGGAAAGATTACTTaGGAAATCAAATACAATTTCCCAGCTGTAGGGCTT +
Preference number: 4 (lower is better)
Translates to: PGICMALSGKIT*EIKYNFPAVGL
Trigger: AAGCCCTACAGCTGGGAAATTGTATTTGATTTCCAAAGTAATCTTTCCAGATAAAGCCATGCAAATCCCAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
3UTR CAA 72 bp ATTATAGAAATAAAGTGCACAATAAATGTAATGCACTaGAGTCATCCCAAAACATTCCCTGCCCCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: IIEIKCTINVMH*SHPKTFPAPAP
Trigger: GGGAGCAGGGGCAGGGAATGTTTTGGGATGACTCAAGTGCATTACATTTATTGTGCACTTTATTTCTATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR GCA 90 bp AATAAGACACACACTGAAAGAAAATCACAGTATTGCCTCCAATGCAATAGTTACGTCCTTACTCCCTGTTaGATTCGTTCCCCAAAGTTT +
Preference number: 4 (lower is better)
Translates to: NKTHTERKSQYCLQCNSYVLTPC*IRSPKF
Trigger: AAACTTTGGGGAACGAATGCAACAGGGAGTAAGGAC...GTAACTATTGCATTGGAGGCAATACTGTGATTTTCTTTCAGTGTGTGTCTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR GCA 90 bp AATAAGACACACACTGAAAGAAAATCACAGTATTGCCTCCAATGCAATAGTTACGAGAAGCTACATTACTaGAGAAGGCTGAATAGGCAG +
Preference number: 4 (lower is better)
Translates to: NKTHTERKSQYCLQCNSYEKLHY*RRLNRQ
Trigger: CTGCCTATTCAGCCTTCTGCAGTAATGTAGCTTCTC...GTAACTATTGCATTGGAGGCAATACTGTGATTTTCTTTCAGTGTGTGTCTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR CAA 72 bp AAAGACAGCCTCAAGTGCTTAATAATACCAATGTTATaGCGTTTTGGATCTGGTAGCCTAAAGTCTCAACTC +
Preference number: 4 (lower is better)
Translates to: KDSLKCLIIPML*RFGSGSLKSQL
Trigger: GAGTTGAGACTTTAGGCTACCAGATCCAAAACGCAATAACATTGGTATTATTAAGCACTTGAGGCTGTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR TCA 90 bp CAAAATATTGAACCTACATATTACTTTGGATCCCGAAACCAAAGAGGTTTCCTAGCCACGCTCACATCCTaGACAATACATTTTGTGAAA +
Preference number: 4 (lower is better)
Translates to: QNIEPTYYFGSRNQRGFLATLTS*TIHFVK
Trigger: TTTCACAAAATGTATTGTTCAGGATGTGAGCGTGGC...TAGGAAACCTCTTTGGTTTCGGGATCCAAAGTAATATGTAGGTTCAATATTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR CCA 90 bp AATAAGACACACACTGAAAGAAAATCACAGTATTGCCTCCAATGCAATAGTTACCACATCACTGTTGCCTaGTTTAACTGCAAACTTTGC +
Preference number: 4 (lower is better)
Translates to: NKTHTERKSQYCLQCNSYHITVA*FNCKLC
Trigger: GCAAAGTTTGCAGTTAAACCAGGCAACAGTGATGTG...GTAACTATTGCATTGGAGGCAATACTGTGATTTTCTTTCAGTGTGTGTCTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR CAA 72 bp CTTAAATGTGATGGAGATACAGTACAGATGATGTTCTaGGAACCTGTAATAAAACACTCTACAGTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: LKCDGDTVQMMF*EPVIKHSTVFL
Trigger: CAGGAAGACTGTAGAGTGTTTTATTACAGGTTCCAAGAACATCATCTGTACTGTATCTCCATCACATTTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR CCA 90 bp AATAAGACACACACTGAAAGAAAATCACAGTATTGCCTCCAATGCAATAGTTACACCTACATATTACTTTaGATCCCGAAACCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: NKTHTERKSQYCLQCNSYTYILL*IPKPKR
Trigger: CCTCTTTGGTTTCGGGATCCAAAGTAATATGTAGGT...GTAACTATTGCATTGGAGGCAATACTGTGATTTTCTTTCAGTGTGTGTCTTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR TCA 90 bp AATAAGACACACACTGAAAGAAAATCACAGTATTGCCTCCAATGCAATAGTTACTACAGTTTAATTTCATaGTCAGCAGCCCTGATAACA +
Preference number: 4 (lower is better)
Translates to: NKTHTERKSQYCLQCNSYYSLIS*SAALIT
Trigger: TGTTATCAGGGCTGCTGATCATGAAATTAAACTGTA...GTAACTATTGCATTGGAGGCAATACTGTGATTTTCTTTCAGTGTGTGTCTTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
3UTR CAA 72 bp CCTAACATTCCACAGCCAAAGTGTTTCTCTCAATTCTaGTGTGATTTGTTGATTTTCATCTCTGGACAAAAT +
Preference number: 4 (lower is better)
Translates to: PNIPQPKCFSQF*CDLLIFISGQN
Trigger: ATTTTGTCCAGAGATGAAAATCAACAAATCACACAAGAATTGAGAGAAACACTTTGGCTGTGGAATGTTAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS GCA 90 bp CTCGGTGGGGCCGCGACTCCCGTCAGGGAAGCTCTCCCGGCCCGGTaGCGCCTCCTACGCCCGGCCCGAGCCTCCCACGGCTGGGCTCAC +
Preference number: 5 (lower is better)
Translates to: LGGAATPVREALPAR*RLLRPARASHGWAH
Trigger: GTGAGCCCAGCCGTGGGAGGCTCGGGCCGGGCGTAGGAGGCGGCACCGGGCCGGGAGAGCTTCCCTGACGGGAGTCGCGGCCCCACCGAG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS CCA 90 bp CGGGCAGCAGCAGCGTCAGCAGCAGCAGCAGCCGCCGGGCCGGCATaGCGAGGACTCGGCCCTGGCTCCGGGGGCGGTACGGACAGAGGA +
Preference number: 5 (lower is better)
Translates to: RAAAASAAAAAAGPA*RGLGPGSGGGTDRG
Trigger: TCCTCTGTCCGTACCGCCCCCGGAGCCAGGGCCGAGTCCTCGCCATGCCGGCCCGGCGGCTGCTGCTGCTGCTGACGCTGCTGCTGCCCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000433197.4
ENST00000584041.1
ENST00000606895.2
ENST00000680433.1
CDS CCA 90 bp CTGACTAGGCAGCGGCGGCACCCCCATTCCCGGCCCTATAAGCGCTaGGTGCCGCGGCTTCTTCCGGTCGGGGCGGAGTTGCGGGCGGGG +
Preference number: 5 (lower is better)
Translates to: LTRQRRHPHSRPYKR*VPRLLPVGAELRAG
Trigger: CCCCGCCCGCAACTCCGCCCCGACCGGAAGAAGCCGCGGCACCCAGCGCTTATAGGGCCGGGAATGGGGGTGCCGCCGCTGCCTAGTCAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR CAA 90 bp GGCCGGGGCCTTCTGGGACCCCCAAGTGCCGTGCAGGACGCCACGAAGTTGCGCGACAGCCGCGCTGGCTaGGGAGGCTCTTCGGGCGGC +
Preference number: 5 (lower is better)
Translates to: GRGLLGPPSAVQDATKLRDSRAG*GGSSGG
Trigger: GCCGCCCGAAGAGCCTCCCAAGCCAGCGCGGCTGTC...GCGCAACTTCGTGGCGTCCTGCACGGCACTTGGGGGTCCCAGAAGGCCCCGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS TCA 90 bp GGAGGCCCTGGGGGACGTGCTGGGGCTGCTGGTGCCCGAGCTCTCTaGGTACGGGCCAGACGTGTCCAGGAGCTCGCCGTCCTGAGCCGT +
Preference number: 5 (lower is better)
Translates to: GGPGGRAGAAGARAL*VRARRVQELAVLSR
Trigger: ACGGCTCAGGACGGCGAGCTCCTGGACACGTCTGGCCCGTACTCAGAGAGCTCGGGCACCAGCAGCCCCAGCACGTCCCCCAGGGCCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000433197.4
ENST00000680433.1
ENST00000680625.1
CDS TCA 90 bp GGGGCGGGGCCGAAGGCGGTGCTGGCATCTGGCTGGCTTCGCTCATaGGGCGTCGGCGGCTGTAAAGGACCAGGCCTCGGCATCCAGCGT +
Preference number: 5 (lower is better)
Translates to: GAGPKAVLASGWLRS*GVGGCKGPGLGIQR
Trigger: ACGCTGGATGCCGAGGCCTGGTCCTTTACAGCCGCCGACGCCTCATGAGCGAAGCCAGCCAGATGCCAGCACCGCCTTCGGCCCCGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS GCA 90 bp CAGAGCTGCCGGAGCAGAGCGAGTGGTTGGAGGCCCTGGGGGACGTaGTGGGGCTGCTGGTGCCCGAGCTCTCTGAGTACGGGCCAGACG +
Preference number: 5 (lower is better)
Translates to: QSCRSRASGWRPWGT*WGCWCPSSLSTGQT
Trigger: CGTCTGGCCCGTACTCAGAGAGCTCGGGCACCAGCAGCCCCAGCACGTCCCCCAGGGCCTCCAACCACTCGCTCTGCTCCGGCAGCTCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000433197.4
ENST00000680433.1
ENST00000680625.1
CDS CCA 90 bp GAGGCGTCGGCGGCTGTAAAGGACCAGGCCTCGGCATCCAGCGTCTaGGGGCGCTGGGGGATCGAGGCGCGAAGCTTGTCTGTGGCTGGG +
Preference number: 5 (lower is better)
Translates to: EASAAVKDQASASSV*GRWGIEARSLSVAG
Trigger: CCCAGCCACAGACAAGCTTCGCGCCTCGATCCCCCAGCGCCCCCAGACGCTGGATGCCGAGGCCTGGTCCTTTACAGCCGCCGACGCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS TCA 90 bp CGCGACGACAGCGAGGCGGTGACCGAGCCTCAGCGGACGCAGAACTaGCTAGGCAGCGGCGGCACCCCCATTCCCGGCCCTATAAGCGCT +
Preference number: 5 (lower is better)
Translates to: RDDSEAVTEPQRTQN*LGSGGTPIPGPISA
Trigger: AGCGCTTATAGGGCCGGGAATGGGGGTGCCGCCGCTGCCTAGTCAGTTCTGCGTCCGCTGAGGCTCGGTCACCGCCTCGCTGTCGTCGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS GCA 90 bp AGAGCGAGTGGTTGGAGGCCCTGGGGGACGTGCTGGGGCTGCTGGTaGCCGAGCTCTCTGAGTACGGGCCAGACGTGTCCAGGAGCTCGC +
Preference number: 5 (lower is better)
Translates to: RASGWRPWGTCWGCW*PSSLSTGQTCPGAR
Trigger: GCGAGCTCCTGGACACGTCTGGCCCGTACTCAGAGAGCTCGGGCACCAGCAGCCCCAGCACGTCCCCCAGGGCCTCCAACCACTCGCTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000433197.4
ENST00000680433.1
ENST00000680625.1
CDS GCA 90 bp CGGAGCAGAGCGAGTGGTTGGAGGCCCTGGGGGACGTGCTGGGGCTaGTGGTGCCCGAGCTCTCTGAGTACGGGCCAGACGTGTCCAGGA +
Preference number: 5 (lower is better)
Translates to: RSRASGWRPWGTCWG*WCPSSLSTGQTCPG
Trigger: TCCTGGACACGTCTGGCCCGTACTCAGAGAGCTCGGGCACCAGCAGCCCCAGCACGTCCCCCAGGGCCTCCAACCACTCGCTCTGCTCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000433197.4
ENST00000680433.1
ENST00000680625.1
CDS CCA 90 bp TCCTTAAGCATGGAGTCCACGGGGGCCTCGGGCCGGGCAGGGGCATaGGCGGGCTTCTCCTCCACATCCCGAGACACGGTGGTAGGTGCG +
Preference number: 5 (lower is better)
Translates to: SLSMESTGASGRAGA*AGFSSTSRDTVVGA
Trigger: CGCACCTACCACCGTGTCTCGGGATGTGGAGGAGAAGCCCGCCCATGCCCCTGCCCGGCCCGAGGCCCCCGTGGACTCCATGCTTAAGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000433197.4
ENST00000680433.1
ENST00000680625.1
CDS CCA 90 bp AGCTGCCGGAGCAGAGCGAGTGGTTGGAGGCCCTGGGGGACGTGCTaGGGCTGCTGGTGCCCGAGCTCTCTGAGTACGGGCCAGACGTGT +
Preference number: 5 (lower is better)
Translates to: SCRSRASGWRPWGTC*GCWCPSSLSTGQTC
Trigger: ACACGTCTGGCCCGTACTCAGAGAGCTCGGGCACCAGCAGCCCCAGCACGTCCCCCAGGGCCTCCAACCACTCGCTCTGCTCCGGCAGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000433197.4
ENST00000680433.1
ENST00000680625.1
CDS CCA 90 bp GCCAGACGTGTCCAGGAGCTCGCCGTCCTGAGCCGTGTCTCCAGGTaGGTGGAAGGGCAGCTGCTGCTGCTGCTGCTGCAGGAGCTGGAT +
Preference number: 5 (lower is better)
Translates to: ARRVQELAVLSRVSR*VEGQLLLLLLQELD
Trigger: ATCCAGCTCCTGCAGCAGCAGCAGCAGCAGCTGCCCTTCCACCCACCTGGAGACACGGCTCAGGACGGCGAGCTCCTGGACACGTCTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433197.4
ENST00000680433.1
ENST00000680625.1
CDS CCA 90 bp CCTCATCTCCATCGTCTTGTTCCAGGGAGGGGCTGCTGCCAGCCTTaGAGGCAGAGCTGCCGGAGCAGAGCGAGTGGTTGGAGGCCCTGG +
Preference number: 5 (lower is better)
Translates to: PHLHRLVPGRGCCQP*RQSCRSRASGWRPW
Trigger: CCAGGGCCTCCAACCACTCGCTCTGCTCCGGCAGCTCTGCCTCCAAGGCTGGCAGCAGCCCCTCCCTGGAACAAGACGATGGAGATGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433197.4
ENST00000680433.1
ENST00000680625.1
CDS GCA 90 bp CGCTGGTTTCCTCATCTCCATCGTCTTGTTCCAGGGAGGGGCTGCTaGCAGCCTTGGAGGCAGAGCTGCCGGAGCAGAGCGAGTGGTTGG +
Preference number: 5 (lower is better)
Translates to: RWFPHLHRLVPGRGC*QPWRQSCRSRASGW
Trigger: CCAACCACTCGCTCTGCTCCGGCAGCTCTGCCTCCAAGGCTGGCAGCAGCCCCTCCCTGGAACAAGACGATGGAGATGAGGAAACCAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433197.4
ENST00000680433.1
ENST00000680625.1
CDS GCA 90 bp CCACGCTGGTTTCCTCATCTCCATCGTCTTGTTCCAGGGAGGGGCTaGTGCCAGCCTTGGAGGCAGAGCTGCCGGAGCAGAGCGAGTGGT +
Preference number: 5 (lower is better)
Translates to: PRWFPHLHRLVPGRG*CQPWRQSCRSRASG
Trigger: ACCACTCGCTCTGCTCCGGCAGCTCTGCCTCCAAGGCTGGCAGCAGCCCCTCCCTGGAACAAGACGATGGAGATGAGGAAACCAGCGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433197.4
ENST00000680433.1
ENST00000680625.1
CDS-3UTR CAA 90 bp CTCTGTCTCAGGCCACCTGGCATGCGGCATGGGAGCAGCAGGAAATGCGGTCTGACGGCCACGTCGCGGTaGTCAAACATGCCCCGGTAC +
Preference number: 5 (lower is better)
Translates to: LCLRPPGMRHGSSRKCGLTATSR*SNMPRY
Trigger: GTACCGGGGCATGTTTGACAACCGCGACGTGGCCGT...CAGACCGCATTTCCTGCTGCTCCCATGCCGCATGCCAGGTGGCCTGAGACAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS TCA 90 bp CCCTCTCACACGCTGCAGCATGATCACCTGTCTGGAGGGGGACAGTaGTGTTCTCCCGCCAGTCCATCTTCACCACGGCTCTCCCGCCTC +
Preference number: 5 (lower is better)
Translates to: PSHTLQHDHLSGGGQ*CSPASPSSPRLSRL
Trigger: GAGGCGGGAGAGCCGTGGTGAAGATGGACTGGCGGGAGAACATCACTGTCCCCCTCCAGACAGGTGATCATGCTGCAGCGTGTGAGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR CAA 90 bp CCCAGTTCCCAGAGGATCACAAGGCCAAGGATCCAATGGGCACACCATGAGGACGAGCAGAGCGAGTGGTaGGAGGCCCTGGGGGACGTG +
Preference number: 5 (lower is better)
Translates to: PSSQRITRPRIQWAHHEDEQSEW*EALGDV
Trigger: CACGTCCCCCAGGGCCTCCAACCACTCGCTCTGCTC...GTCCTCATGGTGTGCCCATTGGATCCTTGGCCTTGTGATCCTCTGGGAACTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp AGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCAACGGCACCCAGGAGGATGTaGGCCTGCCGCTGCAGGGAC +
Preference number: 5 (lower is better)
Translates to: RLLQWEAHCSHVLCGFPTAPRRM*ACRCRD
Trigger: GTCCCTGCAGCGGCAGGCCAACATCCTCCTGGGTGC...CGTTGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp CAGAACAGAGGGGCCGCCCTCGCTCAGAGGGCGTCTGGAGTCACTGGGGGCTGGAACAGCCTTCCAGGATaGGAGAAGTCCCATAACCTG +
Preference number: 5 (lower is better)
Translates to: QNRGAALAQRASGVTGGWNSLPG*EKSHNL
Trigger: CAGGTTATGGGACTTCTCCAATCCTGGAAGGCTGTT...CCAGCCCCCAGTGACTCCAGACGCCCTCTGAGCGAGGGCGGCCCCTCTGTTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR CAA 90 bp CAGACCCTTCCCCTGGATCCCAACGCCCTTTCGGCTCCTCCGCGGCCCCCGCCAAGTCCTTACTCCCTGTaGCATTCGTTCCCCAAAGTT +
Preference number: 5 (lower is better)
Translates to: QTLPLDPNALSAPPRPPPSPYSL*HSFPKV
Trigger: AACTTTGGGGAACGAATGCAACAGGGAGTAAGGACT...TGGCGGGGGCCGCGGAGGAGCCGAAAGGGCGTTGGGATCCAGGGGAAGGGTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR CAA 90 bp CCTCCCGCCACATCAACTCTGTGCTCCTCCTCTACCGTGCCAGGGACACTCCCATCCCCAACCCCCAGGTaGTGGACCCATACTGGTCTG +
Preference number: 5 (lower is better)
Translates to: PPATSTLCSSSTVPGTLPSPTPR*WTHTGL
Trigger: CAGACCAGTATGGGTCCACAACCTGGGGGTTGGGGA...TGGGAGTGTCCCTGGCACGGTAGAGGAGGAGCACAGAGTTGATGTGGCGGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS TCA 90 bp AGGCGGCAGCGACTTTTGCAACCTGCCCTCTCACACGCTGCAGCATaGTCACCTGTCTGGAGGGGGACAGTGATGTTCTCCCGCCAGTCC +
Preference number: 5 (lower is better)
Translates to: RRQRLLQPALSHAAA*SPVWRGTVMFSRQS
Trigger: GGACTGGCGGGAGAACATCACTGTCCCCCTCCAGACAGGTGATCATGCTGCAGCGTGTGAGAGGGCAGGTTGCAAAAGTCGCTGCCGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS GCA 90 bp CCCGAGGTGGTCTGCTGCAGCAAGGTGATGGGCTCCAGGCCGAGATaGGCAAAGTCCTTCTGCTCCACATACTCTTGCAGGGTGGCTGCA +
Preference number: 5 (lower is better)
Translates to: PEVVCCSKVMGSRPR*AKSFCSTYSCRVAA
Trigger: TGCAGCCACCCTGCAAGAGTATGTGGAGCAGAAGGACTTTGCGCATCTCGGCCTGGAGCCCATCACCTTGCTGCAGCAGACCACCTCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433197.4
ENST00000680433.1
ENST00000680625.1
CDS-3UTR CAA 90 bp CAGAACAGAGGGGCCGCCCTCGCTCAGAGGGCGTCTGGAGTCACTGGGGGCTGGCCCTTTCTTCTAGAGTaGGTGGGAAGAAACTCTGCT +
Preference number: 5 (lower is better)
Translates to: QNRGAALAQRASGVTGGWPFLLE*VGRNSA
Trigger: AGCAGAGTTTCTTCCCACCAACTCTAGAAGAAAGGG...CCAGCCCCCAGTGACTCCAGACGCCCTCTGAGCGAGGGCGGCCCCTCTGTTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR CAA 90 bp CGCTGGCTTGGGAGGCTCTTCGGGCGGCCGACGCCTCGGTGGGGCCGCGACTCCAAATATGGGCTATTGTaGAACTCTCTCTCGAATAAC +
Preference number: 5 (lower is better)
Translates to: RWLGRLFGRPTPRWGRDSKYGLL*NSLSNN
Trigger: GTTATTCGAGAGAGAGTTCAACAATAGCCCATATTT...GGAGTCGCGGCCCCACCGAGGCGTCGGCCGCCCGAAGAGCCTCCCAAGCCAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR CAA 90 bp GCACCTTCTCCACCTTCTGATCCTCTCTTGGGTTACTGCCAAAGCCCACAGGTAGAGCAGAGCGAGTGGTaGGAGGCCCTGGGGGACGTG +
Preference number: 5 (lower is better)
Translates to: APSPPSDPLLGYCQSPQVEQSEW*EALGDV
Trigger: CACGTCCCCCAGGGCCTCCAACCACTCGCTCTGCTC...TACCTGTGGGCTTTGGCAGTAACCCAAGAGAGGATCAGAAGGTGGAGAAGGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp CCAGCATCTTCCCAGTTCCCTGTAGGTCACGAGGGGCCACTTCTCCCACTTCCTTGCCCCGGTACACAATaGTGCCCTCAGCTCCATGGC +
Preference number: 5 (lower is better)
Translates to: PASSQFPVGHEGPLLPLPCPGTQ*CPQLHG
Trigger: GCCATGGAGCTGAGGGCACAATTGTGTACCGGGGCA...AGGAAGTGGGAGAAGTGGCCCCTCGTGACCTACAGGGAACTGGGAAGATGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp CCAGCATCTTCCCAGTTCCCTGTAGGTCACGAGGGGCCACTTCTCCCACTTCCTGGAACTCTTTACCTCTaGCCCCAGGCGCTCCTGAGC +
Preference number: 5 (lower is better)
Translates to: PASSQFPVGHEGPLLPLPGTLYL*PQALLS
Trigger: GCTCAGGAGCGCCTGGGGCAAGAGGTAAAGAGTTCC...AGGAAGTGGGAGAAGTGGCCCCTCGTGACCTACAGGGAACTGGGAAGATGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS GCA 90 bp GTTCGGGTGCTCATCCGATTCTCGCAACAGCTGGACCTCACGGTCTaGGAAGCTAAAACACTCGGGGAGGATCCTCTTCACGGCCACGTC +
Preference number: 5 (lower is better)
Translates to: VRVLIRFSQQLDLTV*EAKTLGEDPLHGHV
Trigger: GACGTGGCCGTGAAGAGGATCCTCCCCGAGTGTTTTAGCTTCGCAGACCGTGAGGTCCAGCTGTTGCGAGAATCGGATGAGCACCCGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433197.4
ENST00000583077.1
ENST00000680433.1
ENST00000680625.1
CDS-3UTR CAA 90 bp AGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCAACGAGGGGAGGCGTAGTTTaGGATCCACAGGACGTCCCC +
Preference number: 5 (lower is better)
Translates to: RLLQWEAHCSHVLCGFPTRGGVV*DPQDVP
Trigger: GGGGACGTCCTGTGGATCCAAAACTACGCCTCCCCT...CGTTGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp CCCAGTTCCCAGAGGATCACAAGGCCAAGGATCCAATGGGCACACCATGAGGACTGCCCCGGTACACAATaGTGCCCTCAGCTCCATGGC +
Preference number: 5 (lower is better)
Translates to: PSSQRITRPRIQWAHHEDCPGTQ*CPQLHG
Trigger: GCCATGGAGCTGAGGGCACAATTGTGTACCGGGGCA...GTCCTCATGGTGTGCCCATTGGATCCTTGGCCTTGTGATCCTCTGGGAACTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp CCAGCATCTTCCCAGTTCCCTGTAGGTCACGAGGGGCCACTTCTCCCACTTCCTGGCAGCTCAAGGCACTaGGTTTGGGAAGCCTGGTCT +
Preference number: 5 (lower is better)
Translates to: PASSQFPVGHEGPLLPLPGSSRH*VWEAWS
Trigger: AGACCAGGCTTCCCAAACCAAGTGCCTTGAGCTGCC...AGGAAGTGGGAGAAGTGGCCCCTCGTGACCTACAGGGAACTGGGAAGATGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp TGTCCAACCTGGGAGGGTGGAATTTCGGCTCACCTGGAGAGGATGCCTGATGACTGGGGACGAAGGAGTTaGACTGCCTACTCGCTGGCC +
Preference number: 5 (lower is better)
Translates to: CPTWEGGISAHLERMPDDWGRRS*TAYSLA
Trigger: GGCCAGCGAGTAGGCAGTCAAACTCCTTCGTCCCCA...GTCATCAGGCATCCTCTCCAGGTGAGCCGAAATTCCACCCTCCCAGGTTGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp TGGTGCCTTCTTTCACATGTTAGCTGTCCCCATTTCACCTATCAGGAAGGAGTCCAGGACGCCACGAAGTaGCGCCCGAGCCCGCGGGGT +
Preference number: 5 (lower is better)
Translates to: WCLLSHVSCPHFTYQEGVQDATK*RPSPRG
Trigger: ACCCCGCGGGCTCGGGCGCAACTTCGTGGCGTCCTG...GACTCCTTCCTGATAGGTGAAATGGGGACAGCTAACATGTGAAAGAAGGCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR CAA 90 bp CACAAAAGTCAGCGACCAGAGACCATGAGGGACATGGGCCGCAGAGCACTGCTTAGGCGGCAGCGACTTTaGCAACCTGCCCTCTCACAC +
Preference number: 5 (lower is better)
Translates to: HKSQRPETMRDMGRRALLRRQRL*QPALSH
Trigger: GTGTGAGAGGGCAGGTTGCAAAAGTCGCTGCCGCCT...AAGCAGTGCTCTGCGGCCCATGTCCCTCATGGTCTCTGGTCGCTGACTTTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS GCA 90 bp TTTGGAAAGGCGGCAGCGACTTTTGCAACCTGCCCTCTCACACGCTaGAGCATGATCACCTGTCTGGAGGGGGACAGTGATGTTCTCCCG +
Preference number: 5 (lower is better)
Translates to: FGKAAATFATCPLTR*SMITCLEGDSDVLP
Trigger: CGGGAGAACATCACTGTCCCCCTCCAGACAGGTGATCATGCTGCAGCGTGTGAGAGGGCAGGTTGCAAAAGTCGCTGCCGCCTTTCCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR CAA 90 bp TGCAAAGCCGGGAGGCATCAAGCTCTAATTGTGGTGACCAGGCCCTCAGTCACAAGAGTGGGCGTCAGCTaGCTCTTGGCCTCTGTCTCC +
Preference number: 5 (lower is better)
Translates to: CKAGRHQALIVVTRPSVTRVGVS*LLASVS
Trigger: GGAGACAGAGGCCAAGAGCAAGCTGACGCCCACTCT...TGTGACTGAGGGCCTGGTCACCACAATTAGAGCTTGATGCCTCCCGGCTTTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp AGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCAACGATCACACACTCCCCCTaGTCCCCAATGGTGACGCCA +
Preference number: 5 (lower is better)
Translates to: RLLQWEAHCSHVLCGFPTITHSP*SPMVTP
Trigger: TGGCGTCACCATTGGGGACAAGGGGGAGTGTGTGAT...CGTTGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp CCCAGTTCCCAGAGGATCACAAGGCCAAGGATCCAATGGGCACACCATGAGGACATCACACACTCCCCCTaGTCCCCAATGGTGACGCCA +
Preference number: 5 (lower is better)
Translates to: PSSQRITRPRIQWAHHEDITHSP*SPMVTP
Trigger: TGGCGTCACCATTGGGGACAAGGGGGAGTGTGTGAT...GTCCTCATGGTGTGCCCATTGGATCCTTGGCCTTGTGATCCTCTGGGAACTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp ATCACCTGGGTACTCCCAAAGAGAAAACCTGTGCTGAGAACGAGCTGGGCTGGGAGTCCGGGATCAAACTaGACGTCCGTGCTGGGCGTG +
Preference number: 5 (lower is better)
Translates to: ITWVLPKRKPVLRTSWAGSPGSN*TSVLGV
Trigger: CACGCCCAGCACGGACGTCAAGTTTGATCCCGGACT...CCCAGCCCAGCTCGTTCTCAGCACAGGTTTTCTCTTTGGGAGTACCCAGGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp CCAGCATCTTCCCAGTTCCCTGTAGGTCACGAGGGGCCACTTCTCCCACTTCCTGGCAATGTACTGGAATaGCCGGTCCTTCTCCGTGCA +
Preference number: 5 (lower is better)
Translates to: PASSQFPVGHEGPLLPLPGNVLE*PVLLRA
Trigger: TGCACGGAGAAGGACCGGCAATTCCAGTACATTGCC...AGGAAGTGGGAGAAGTGGCCCCTCGTGACCTACAGGGAACTGGGAAGATGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp CTCTGTCTCAGGCCACCTGGCATGCGGCATGGGAGCAGCAGGAAATGCGGTCTGATCTTGCCGTGTGCATaGGGCATGGATATGAGGATG +
Preference number: 5 (lower is better)
Translates to: LCLRPPGMRHGSSRKCGLILPCA*GMDMRM
Trigger: CATCCTCATATCCATGCCCAATGCACACGGCAAGAT...CAGACCGCATTTCCTGCTGCTCCCATGCCGCATGCCAGGTGGCCTGAGACAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp TGTCCAACCTGGGAGGGTGGAATTTCGGCTCACCTGGAGAGGATGCCTGATGACCTTGTTCCACCGGCCTaGGGGACGAAGGAGTTTGAC +
Preference number: 5 (lower is better)
Translates to: CPTWEGGISAHLERMPDDLVPPA*GTKEFD
Trigger: GTCAAACTCCTTCGTCCCCAAGGCCGGTGGAACAAG...GTCATCAGGCATCCTCTCCAGGTGAGCCGAAATTCCACCCTCCCAGGTTGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp GGGAAACCAGAATTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTACGGTGACCCTGGCCTaGGCCACCCACCCTGGCCCT +
Preference number: 5 (lower is better)
Translates to: GKPEFSRLELDTPDDAQGTVTLA*ATHPGP
Trigger: AGGGCCAGGGTGGGTGGCCAAGGCCAGGGTCACCGT...ACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAATTCTGGTTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS TCA 90 bp GGACACAAAGTGGGACATCTTGTAGTCCACGTCGTCCTCAGGCAGTaGGGCCGCATAGTCAAAGTAGGTGGCATTCCACCGGAGCTCTCG +
Preference number: 5 (lower is better)
Translates to: GHKVGHLVVHVVLRQ*GRIVKVGGIPPELS
Trigger: CGAGAGCTCCGGTGGAATGCCACCTACTTTGACTATGCGGCCTCACTGCCTGAGGACGACGTGGACTACAAGATGTCCCACTTTGTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433197.4
ENST00000680433.1
ENST00000680625.1
CDS TCA 90 bp ATCCAGCAGAGAGCACTTACTGTAGTCCACGTCGTCCTCAGGCAGTaGGGCCGCATAGTCAAAGTAGGTGGCATTCCACCGGAGCTCTCG +
Preference number: 5 (lower is better)
Translates to: IQQRALTVVHVVLRQ*GRIVKVGGIPPELS
Trigger: CGAGAGCTCCGGTGGAATGCCACCTACTTTGACTATGCGGCCTCACTGCCTGAGGACGACGTGGACTACAGTAAGTGCTCTCTGCTGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579249.1
CDS GCA 90 bp TCCCGCCAGTCCATCTTCACCACGGCTCTCCCGCCTCTCTCTAACTaGTTCACGATCGGGCCATCCAGGGATTCCTTTTCTATTCTGTCG +
Preference number: 5 (lower is better)
Translates to: SRQSIFTTALPPLSN*FTIGPSRDSFSILS
Trigger: CGACAGAATAGAAAAGGAATCCCTGGATGGCCCGATCGTGAAGCAGTTAGAGAGAGGCGGGAGAGCCGTGGTGAAGATGGACTGGCGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433197.4
ENST00000680433.1
ENST00000680625.1
CDS-3UTR CAA 90 bp CCAGCATCTTCCCAGTTCCCTGTAGGTCACGAGGGGCCACTTCTCCCACTTCCTGTCTCCACAGCGACATaGATGTGCATCACCTTCCTC +
Preference number: 5 (lower is better)
Translates to: PASSQFPVGHEGPLLPLPVSTAT*MCITFL
Trigger: GAGGAAGGTGATGCACATCAATGTCGCTGTGGAGAC...AGGAAGTGGGAGAAGTGGCCCCTCGTGACCTACAGGGAACTGGGAAGATGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp ATCACCTGGGTACTCCCAAAGAGAAAACCTGTGCTGAGAACGAGCTGGGCTGGGCTGCTCCACATACTCTaGCAGGGTGGCTGCACACAG +
Preference number: 5 (lower is better)
Translates to: ITWVLPKRKPVLRTSWAGLLHIL*QGGCTQ
Trigger: CTGTGTGCAGCCACCCTGCAAGAGTATGTGGAGCAG...CCCAGCCCAGCTCGTTCTCAGCACAGGTTTTCTCTTTGGGAGTACCCAGGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp TCTAGAGTTGGTGGGAAGAAACTCTGCTGGATCTACTCACCTGCAGATCTTCCAGCACCCAGGAGGATGTaGGCCTGCCGCTGCAGGGAC +
Preference number: 5 (lower is better)
Translates to: SRVGGKKLCWIYSPADLPAPRRM*ACRCRD
Trigger: GTCCCTGCAGCGGCAGGCCAACATCCTCCTGGGTGC...TGGAAGATCTGCAGGTGAGTAGATCCAGCAGAGTTTCTTCCCACCAACTCTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp GACAGAGAAAGGAACGGCTCTGGGAAAGCCAAACCTGGCCAAAGTCCAACTTCCGGAACTCTTTACCTCTaGCCCCAGGCGCTCCTGAGC +
Preference number: 5 (lower is better)
Translates to: DRERNGSGKAKPGQSPTSGTLYL*PQALLS
Trigger: GCTCAGGAGCGCCTGGGGCAAGAGGTAAAGAGTTCC...GGAAGTTGGACTTTGGCCAGGTTTGGCTTTCCCAGAGCCGTTCCTTTCTCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp GGTGATCACACCCAGGTCAGAAATGACCACCTAGAGCACGACACCATCACTCACTGGGGACGAAGGAGTTaGACTGCCTACTCGCTGGCC +
Preference number: 5 (lower is better)
Translates to: GDHTQVRNDHLEHDTITHWGRRS*TAYSLA
Trigger: GGCCAGCGAGTAGGCAGTCAAACTCCTTCGTCCCCA...GTGAGTGATGGTGTCGTGCTCTAGGTGGTCATTTCTGACCTGGGTGTGATCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR CAA 90 bp CCAGCATCTTCCCAGTTCCCTGTAGGTCACGAGGGGCCACTTCTCCCACTTCCTCCTTCTGATCCTCTCTaGGGTTACTGCCAAAGCCCA +
Preference number: 5 (lower is better)
Translates to: PASSQFPVGHEGPLLPLPPSDPL*GYCQSP
Trigger: TGGGCTTTGGCAGTAACCCAAGAGAGGATCAGAAGG...AGGAAGTGGGAGAAGTGGCCCCTCGTGACCTACAGGGAACTGGGAAGATGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp GCTACTCGCGCTGTCTCTGAGGCCCTCCTTTGCAGACATCATGACCGTAAGGCTAGGCATCGGAAACAGTaGTCTCTAGGCAAGTGGGGC +
Preference number: 5 (lower is better)
Translates to: ATRAVSEALLCRHHDRKARHRKQ*SLGKWG
Trigger: GCCCCACTTGCCTAGAGACAACTGTTTCCGATGCCT...AGCCTTACGGTCATGATGTCTGCAAAGGAGGGCCTCAGAGACAGCGCGAGTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp ATCACCTGGGTACTCCCAAAGAGAAAACCTGTGCTGAGAACGAGCTGGGCTGGGCAGAGTGATGTCTCCTaGGAAGGGCCTCTGACCACC +
Preference number: 5 (lower is better)
Translates to: ITWVLPKRKPVLRTSWAGQSDVS*EGPLTT
Trigger: GGTGGTCAGAGGCCCTTCCAAGGAGACATCACTCTG...CCCAGCCCAGCTCGTTCTCAGCACAGGTTTTCTCTTTGGGAGTACCCAGGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp CCCTCCTTTGCAGACATCATGACCGTAAGGCTTTTGGGGCCAGCATCTTCCCAGGCTCTTCCACATGTGTaGGGACCTGCAGGACTGGAT +
Preference number: 5 (lower is better)
Translates to: PSFADIMTVRLLGPASSQALPHV*GPAGLD
Trigger: ATCCAGTCCTGCAGGTCCCAACACATGTGGAAGAGC...CTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAAGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp ATCACCTGGGTACTCCCAAAGAGAAAACCTGTGCTGAGAACGAGCTGGGCTGGGCGGAGCTCTCGGGTTTaGGTGTCGTACATGGTGATG +
Preference number: 5 (lower is better)
Translates to: ITWVLPKRKPVLRTSWAGRSSRV*VSYMVM
Trigger: CATCACCATGTACGACACCAAAACCCGAGAGCTCCG...CCCAGCCCAGCTCGTTCTCAGCACAGGTTTTCTCTTTGGGAGTACCCAGGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp GCTACTCGCGCTGTCTCTGAGGCCCTCCTTTGCAGACATCATGACCGTAAGGCTACCAGCCCATCACCATaGGACACAAAGTGGGACATC +
Preference number: 5 (lower is better)
Translates to: ATRAVSEALLCRHHDRKATSPSP*DTKWDI
Trigger: GATGTCCCACTTTGTGTCCAATGGTGATGGGCTGGT...AGCCTTACGGTCATGATGTCTGCAAAGGAGGGCCTCAGAGACAGCGCGAGTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp TGTCCAACCTGGGAGGGTGGAATTTCGGCTCACCTGGAGAGGATGCCTGATGACGTCTCCACAGCGACATaGATGTGCATCACCTTCCTC +
Preference number: 5 (lower is better)
Translates to: CPTWEGGISAHLERMPDDVSTAT*MCITFL
Trigger: GAGGAAGGTGATGCACATCAATGTCGCTGTGGAGAC...GTCATCAGGCATCCTCTCCAGGTGAGCCGAAATTCCACCCTCCCAGGTTGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp GGTGATCACACCCAGGTCAGAAATGACCACCTAGAGCACGACACCATCACTCACCTCATCTCCATCGTCTaGTTCCAGGGAGGGGCTGCT +
Preference number: 5 (lower is better)
Translates to: GDHTQVRNDHLEHDTITHLISIV*FQGGAA
Trigger: AGCAGCCCCTCCCTGGAACAAGACGATGGAGATGAG...GTGAGTGATGGTGTCGTGCTCTAGGTGGTCATTTCTGACCTGGGTGTGATCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR CAA 90 bp CCAGCATCTTCCCAGTTCCCTGTAGGTCACGAGGGGCCACTTCTCCCACTTCCTTGGCCCAGGACATCCTaGGGACAGAAGGAAATTTTC +
Preference number: 5 (lower is better)
Translates to: PASSQFPVGHEGPLLPLPWPRTS*GQKEIF
Trigger: GAAAATTTCCTTCTGTCCCAAGGATGTCCTGGGCCA...AGGAAGTGGGAGAAGTGGCCCCTCGTGACCTACAGGGAACTGGGAAGATGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp AGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCAACGATCATGGCCTTGATCTaGCCGTGTGCATTGGGCATG +
Preference number: 5 (lower is better)
Translates to: RLLQWEAHCSHVLCGFPTIMALI*PCALGM
Trigger: CATGCCCAATGCACACGGCAAGATCAAGGCCATGAT...CGTTGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp GCACCTTCTCCACCTTCTGATCCTCTCTTGGGTTACTGCCAAAGCCCACAGGTAGGCAGCTCAAGGCACTaGGTTTGGGAAGCCTGGTCT +
Preference number: 5 (lower is better)
Translates to: APSPPSDPLLGYCQSPQVGSSRH*VWEAWS
Trigger: AGACCAGGCTTCCCAAACCAAGTGCCTTGAGCTGCC...TACCTGTGGGCTTTGGCAGTAACCCAAGAGAGGATCAGAAGGTGGAGAAGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp GGTGATCACACCCAGGTCAGAAATGACCACCTAGAGCACGACACCATCACTCACCAGAGTGATGTCTCCTaGGAAGGGCCTCTGACCACC +
Preference number: 5 (lower is better)
Translates to: GDHTQVRNDHLEHDTITHQSDVS*EGPLTT
Trigger: GGTGGTCAGAGGCCCTTCCAAGGAGACATCACTCTG...GTGAGTGATGGTGTCGTGCTCTAGGTGGTCATTTCTGACCTGGGTGTGATCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR CAA 90 bp CCCAGTTCCCAGAGGATCACAAGGCCAAGGATCCAATGGGCACACCATGAGGACGCTTTGGCCAAAGTGTaGGTTAAGGCTGCTCCAGTG +
Preference number: 5 (lower is better)
Translates to: PSSQRITRPRIQWAHHEDALAKV*VKAAPV
Trigger: CACTGGAGCAGCCTTAACCAACACTTTGGCCAAAGC...GTCCTCATGGTGTGCCCATTGGATCCTTGGCCTTGTGATCCTCTGGGAACTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp AGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCAACGGCTTTGGCCAAAGTGTaGGTTAAGGCTGCTCCAGTG +
Preference number: 5 (lower is better)
Translates to: RLLQWEAHCSHVLCGFPTALAKV*VKAAPV
Trigger: CACTGGAGCAGCCTTAACCAACACTTTGGCCAAAGC...CGTTGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp GCGGCCTCACCTCGAACCCATGCGGGATCTTCCAAGAGTGCAATTCCCACAGCTCTTTCTTCCTTTTCCTaGCCCTCAGGAATTCCCCTC +
Preference number: 5 (lower is better)
Translates to: AASPRTHAGSSKSAIPTALSSFS*PSGIPL
Trigger: GAGGGGAATTCCTGAGGGCAAGGAAAAGGAAGAAAG...AGCTGTGGGAATTGCACTCTTGGAAGATCCCGCATGGGTTCGAGGTGAGGCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS GCA 90 bp CATCCAGCGTTGACACAAACAACAAGGTTTCAGGAAGCGTCACTGTaGTGGTACTTCCAAAAATCCCGAGGCCGGGCAGCAGCAGCGTCA +
Preference number: 5 (lower is better)
Translates to: HPALTQTTRFQEASL*WYFQKSRGRAAAAS
Trigger: TGACGCTGCTGCTGCCCGGCCTCGGGATTTTTGGAAGTACCAGCACAGTGACGCTTCCTGAAACCTTGTTGTTTGTGTCAACGCTGGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000433197.4
ENST00000584041.1
ENST00000680433.1
ENST00000680493.1
CDS GCA 90 bp GCGGCCATTTCCACGTTTACTTTTTGGAAAGGCGGCAGCGACTTTTaGAACCTGCCCTCTCACACGCTGCAGCATGATCACCTGTCTGGA +
Preference number: 5 (lower is better)
Translates to: AAISTFTFWKGGSDF*NLPSHTLQHDHLSG
Trigger: TCCAGACAGGTGATCATGCTGCAGCGTGTGAGAGGGCAGGTTGCAAAAGTCGCTGCCGCCTTTCCAAAAAGTAAACGTGGAAATGGCCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR CAA 90 bp TGCAAAGCCGGGAGGCATCAAGCTCTAATTGTGGTGACCAGGCCCTCAGTCACAAATCTCTCCAGCATCTaGGTAGACGCAGACAGTGGG +
Preference number: 5 (lower is better)
Translates to: CKAGRHQALIVVTRPSVTNLSSI*VDADSG
Trigger: CCCACTGTCTGCGTCTACCAAGATGCTGGAGAGATT...TGTGACTGAGGGCCTGGTCACCACAATTAGAGCTTGATGCCTCCCGGCTTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp GCCGCAACACGATATGTGATGGTGCAGAGCTGTTCTGGCCTGAAAAGAACTTTCCCCACTGCCAGCTTCTaGCAGAGGCCAAAGTCGGAG +
Preference number: 5 (lower is better)
Translates to: AATRYVMVQSCSGLKRTFPTASF*QRPKSE
Trigger: CTCCGACTTTGGCCTCTGCAAGAAGCTGGCAGTGGG...GAAAGTTCTTTTCAGGCCAGAACAGCTCTGCACCATCACATATCGTGTTGCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp GACAGAGAAAGGAACGGCTCTGGGAAAGCCAAACCTGGCCAAAGTCCAACTTCCATGACCGTAAGGCTTTaGGGGCCAGCATCTTCCCAG +
Preference number: 5 (lower is better)
Translates to: DRERNGSGKAKPGQSPTSMTVRL*GPASSQ
Trigger: CTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCAT...GGAAGTTGGACTTTGGCCAGGTTTGGCTTTCCCAGAGCCGTTCCTTTCTCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp CCCTCCTTTGCAGACATCATGACCGTAAGGCTTTTGGGGCCAGCATCTTCCCAGTCTTCGCTGCTCTCCTaGAAGGCCAGGGAACTCTTT +
Preference number: 5 (lower is better)
Translates to: PSFADIMTVRLLGPASSQSSLLS*KARELF
Trigger: AAAGAGTTCCCTGGCCTTCAAGGAGAGCAGCGAAGA...CTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAAGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp GGGAAACCAGAATTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTCTCACCACGAGCCTCTaGTTCCACCGGCCTTGGGGA +
Preference number: 5 (lower is better)
Translates to: GKPEFSRLELDTPDDAQGLTTSL*FHRPWG
Trigger: TCCCCAAGGCCGGTGGAACAAGAGGCTCGTGGTGAG...ACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAATTCTGGTTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp GCTACTCGCGCTGTCTCTGAGGCCCTCCTTTGCAGACATCATGACCGTAAGGCTAACAGCCTTCCAGGATaGGAGAAGTCCCATAACCTG +
Preference number: 5 (lower is better)
Translates to: ATRAVSEALLCRHHDRKANSLPG*EKSHNL
Trigger: CAGGTTATGGGACTTCTCCAATCCTGGAAGGCTGTT...AGCCTTACGGTCATGATGTCTGCAAAGGAGGGCCTCAGAGACAGCGCGAGTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp CCCAGTTCCCAGAGGATCACAAGGCCAAGGATCCAATGGGCACACCATGAGGACCAAAATAACTCCAGGTaGGTGAGGGAAGGGACAAGG +
Preference number: 5 (lower is better)
Translates to: PSSQRITRPRIQWAHHEDQNNSR*VREGTR
Trigger: CCTTGTCCCTTCCCTCACCAACCTGGAGTTATTTTG...GTCCTCATGGTGTGCCCATTGGATCCTTGGCCTTGTGATCCTCTGGGAACTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp CCTCCCGCCACATCAACTCTGTGCTCCTCCTCTACCGTGCCAGGGACACTCCCATCTTTTAAAGTCCATTaGATTGAGCCTGTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: PPATSTLCSSSTVPGTLPSFKVH*IEPVLL
Trigger: CAAGAGGACAGGCTCAATCAAATGGACTTTAAAAGA...TGGGAGTGTCCCTGGCACGGTAGAGGAGGAGCACAGAGTTGATGTGGCGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR CAA 90 bp GGGAAACCAGAATTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTAGGGGAGGCGTAGTTTaGGATCCACAGGACGTCCCC +
Preference number: 5 (lower is better)
Translates to: GKPEFSRLELDTPDDAQGRGGVV*DPQDVP
Trigger: GGGGACGTCCTGTGGATCCAAAACTACGCCTCCCCT...ACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAATTCTGGTTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp GCCGCAACACGATATGTGATGGTGCAGAGCTGTTCTGGCCTGAAAAGAACTTTCTTGGCCTCTGTCTCCTaGGGGAACGGGTACTTCCAC +
Preference number: 5 (lower is better)
Translates to: AATRYVMVQSCSGLKRTFLASVS*GNGYFH
Trigger: GTGGAAGTACCCGTTCCCCAAGGAGACAGAGGCCAA...GAAAGTTCTTTTCAGGCCAGAACAGCTCTGCACCATCACATATCGTGTTGCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp GACAGAGAAAGGAACGGCTCTGGGAAAGCCAAACCTGGCCAAAGTCCAACTTCCAATCTCTCCAGCATCTaGGTAGACGCAGACAGTGGG +
Preference number: 5 (lower is better)
Translates to: DRERNGSGKAKPGQSPTSNLSSI*VDADSG
Trigger: CCCACTGTCTGCGTCTACCAAGATGCTGGAGAGATT...GGAAGTTGGACTTTGGCCAGGTTTGGCTTTCCCAGAGCCGTTCCTTTCTCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp GCCGCAACACGATATGTGATGGTGCAGAGCTGTTCTGGCCTGAAAAGAACTTTCCTCATCTCCATCGTCTaGTTCCAGGGAGGGGCTGCT +
Preference number: 5 (lower is better)
Translates to: AATRYVMVQSCSGLKRTFLISIV*FQGGAA
Trigger: AGCAGCCCCTCCCTGGAACAAGACGATGGAGATGAG...GAAAGTTCTTTTCAGGCCAGAACAGCTCTGCACCATCACATATCGTGTTGCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp TCTGTGATCAATGAGAAATCTCACACTGCAGGACGACACCCTCTGAACTCCGTCCTGCTCCACATACTCTaGCAGGGTGGCTGCACACAG +
Preference number: 5 (lower is better)
Translates to: SVINEKSHTAGRHPLNSVLLHIL*QGGCTQ
Trigger: CTGTGTGCAGCCACCCTGCAAGAGTATGTGGAGCAG...GACGGAGTTCAGAGGGTGTCGTCCTGCAGTGTGAGATTTCTCATTGATCACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp GACAGAGAAAGGAACGGCTCTGGGAAAGCCAAACCTGGCCAAAGTCCAACTTCCTCGGAGATCATGGCCTaGATCTTGCCGTGTGCATTG +
Preference number: 5 (lower is better)
Translates to: DRERNGSGKAKPGQSPTSSEIMA*ILPCAL
Trigger: CAATGCACACGGCAAGATCAAGGCCATGATCTCCGA...GGAAGTTGGACTTTGGCCAGGTTTGGCTTTCCCAGAGCCGTTCCTTTCTCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp TTTGCAGACATCATGACCGTAAGGCTTTTGGGGCCAGCATCTTCCCAGTTCCCTATGACCGTAAGGCTTTaGGGGCCAGCATCTTCCCAG +
Preference number: 5 (lower is better)
Translates to: FADIMTVRLLGPASSQFPMTVRL*GPASSQ
Trigger: CTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCAT...AGGGAACTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp CCAGCATCTTCCCAGTTCCCTGTAGGTCACGAGGGGCCACTTCTCCCACTTCCTAAAAGAACTTTCCACTaGCTGAGCACAGTGGGAAAC +
Preference number: 5 (lower is better)
Translates to: PASSQFPVGHEGPLLPLPKRTFH*LSTVGN
Trigger: GTTTCCCACTGTGCTCAGCAAGTGGAAAGTTCTTTT...AGGAAGTGGGAGAAGTGGCCCCTCGTGACCTACAGGGAACTGGGAAGATGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp CCAGCATCTTCCCAGTTCCCTGTAGGTCACGAGGGGCCACTTCTCCCACTTCCTGAGGGGAGTAGACCATaGGGTTTAAAAGATGATGTC +
Preference number: 5 (lower is better)
Translates to: PASSQFPVGHEGPLLPLPEGSRP*GLKDDV
Trigger: GACATCATCTTTTAAACCCAATGGTCTACTCCCCTC...AGGAAGTGGGAGAAGTGGCCCCTCGTGACCTACAGGGAACTGGGAAGATGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp TGCAAAGCCGGGAGGCATCAAGCTCTAATTGTGGTGACCAGGCCCTCAGTCACACTGCAGTCACGTTCTTaGTGGCTTTCCAACGTCTAC +
Preference number: 5 (lower is better)
Translates to: CKAGRHQALIVVTRPSVTLQSRS*WLSNVY
Trigger: GTAGACGTTGGAAAGCCACAAAGAACGTGACTGCAG...TGTGACTGAGGGCCTGGTCACCACAATTAGAGCTTGATGCCTCCCGGCTTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp CCCTCCTTTGCAGACATCATGACCGTAAGGCTTTTGGGGCCAGCATCTTCCCAGATTGAGCCTGTCCTCTaGCTGACAGCATGCAAACTT +
Preference number: 5 (lower is better)
Translates to: PSFADIMTVRLLGPASSQIEPVL*LTACKL
Trigger: AAGTTTGCATGCTGTCAGCAAGAGGACAGGCTCAAT...CTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAAGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp AGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCAACGAGGCCTTCATTATTCTaGCTTCCAAGCGTATACAGG +
Preference number: 5 (lower is better)
Translates to: RLLQWEAHCSHVLCGFPTRPSLF*LPSVYR
Trigger: CCTGTATACGCTTGGAAGCAAGAATAATGAAGGCCT...CGTTGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp TTTGCAGACATCATGACCGTAAGGCTTTTGGGGCCAGCATCTTCCCAGTTCCCTCAGAAGAACGGGTGTTaGAGCACATGCTTCGCTGAG +
Preference number: 5 (lower is better)
Translates to: FADIMTVRLLGPASSQFPQKNGC*STCFAE
Trigger: CTCAGCGAAGCATGTGCTCAAACACCCGTTCTTCTG...AGGGAACTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp TTTGCAGACATCATGACCGTAAGGCTTTTGGGGCCAGCATCTTCCCAGTTCCCTGAACAACGCACAGCCTaGCTTAGAAGACGCCAAGGA +
Preference number: 5 (lower is better)
Translates to: FADIMTVRLLGPASSQFPEQRTA*LRRRQG
Trigger: TCCTTGGCGTCTTCTAAGCAAGGCTGTGCGTTGTTC...AGGGAACTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp GCCGCAACACGATATGTGATGGTGCAGAGCTGTTCTGGCCTGAAAAGAACTTTCAGGCATCGGAAACAGTaGTCTCTAGGCAAGTGGGGC +
Preference number: 5 (lower is better)
Translates to: AATRYVMVQSCSGLKRTFRHRKQ*SLGKWG
Trigger: GCCCCACTTGCCTAGAGACAACTGTTTCCGATGCCT...GAAAGTTCTTTTCAGGCCAGAACAGCTCTGCACCATCACATATCGTGTTGCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp GACAGAGAAAGGAACGGCTCTGGGAAAGCCAAACCTGGCCAAAGTCCAACTTCCCCTTCCCCACACACTTaGGTTTCTTTGTGGCAGCAA +
Preference number: 5 (lower is better)
Translates to: DRERNGSGKAKPGQSPTSPSPHT*VSLWQQ
Trigger: TTGCTGCCACAAAGAAACCAAAGTGTGTGGGGAAGG...GGAAGTTGGACTTTGGCCAGGTTTGGCTTTCCCAGAGCCGTTCCTTTCTCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp CCCAGTTCCCAGAGGATCACAAGGCCAAGGATCCAATGGGCACACCATGAGGACAAAAGAACTTTCCACTaGCTGAGCACAGTGGGAAAC +
Preference number: 5 (lower is better)
Translates to: PSSQRITRPRIQWAHHEDKRTFH*LSTVGN
Trigger: GTTTCCCACTGTGCTCAGCAAGTGGAAAGTTCTTTT...GTCCTCATGGTGTGCCCATTGGATCCTTGGCCTTGTGATCCTCTGGGAACTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp AGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCAACGAAAGCTCGGGAAATGTaGGCAAAACACCCTTTCATC +
Preference number: 5 (lower is better)
Translates to: RLLQWEAHCSHVLCGFPTKAREM*AKHPFI
Trigger: GATGAAAGGGTGTTTTGCCAACATTTCCCGAGCTTT...CGTTGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS GCA 90 bp GTTGATGGGCAGAGACTATCTGCAAAGGCCGATGACAAAGTCTGCTaGTTCTCTCCGGTCAGGAGGTCAATAACATACCAGATGTCCTGC +
Preference number: 5 (lower is better)
Translates to: VDGQRLSAKADDKVC*FSPVRRSITYQMSC
Trigger: GCAGGACATCTGGTATGTTATTGACCTCCTGACCGGAGAGAAGCAGCAGACTTTGTCATCGGCCTTTGCAGATAGTCTCTGCCCATCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000433197.4
ENST00000577567.5
ENST00000579249.1
ENST00000680433.1
ENST00000680625.1
CDS GCA 90 bp GAGGTTGATGGGCAGAGACTATCTGCAAAGGCCGATGACAAAGTCTaGTGCTTCTCTCCGGTCAGGAGGTCAATAACATACCAGATGTCC +
Preference number: 5 (lower is better)
Translates to: EVDGQRLSAKADDKV*CFSPVRRSITYQMS
Trigger: GGACATCTGGTATGTTATTGACCTCCTGACCGGAGAGAAGCAGCAGACTTTGTCATCGGCCTTTGCAGATAGTCTCTGCCCATCAACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000433197.4
ENST00000577567.5
ENST00000579249.1
ENST00000680433.1
ENST00000680625.1
CDS-3UTR CAA 90 bp TGTCCAACCTGGGAGGGTGGAATTTCGGCTCACCTGGAGAGGATGCCTGATGACAACTTCCATCCAGCGTaGACACAAACAACAAGGTTT +
Preference number: 5 (lower is better)
Translates to: CPTWEGGISAHLERMPDDNFHPA*TQTTRF
Trigger: AAACCTTGTTGTTTGTGTCAACGCTGGATGGAAGTT...GTCATCAGGCATCCTCTCCAGGTGAGCCGAAATTCCACCCTCCCAGGTTGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp ACACCAGATGATGCCCAAGGTGTTTTCATGACAAGTACCCACACGAGATCTCTTTTGGCCTCTGTCTCCTaGGGGAACGGGTACTTCCAC +
Preference number: 5 (lower is better)
Translates to: TPDDAQGVFMTSTHTRSLLASVS*GNGYFH
Trigger: GTGGAAGTACCCGTTCCCCAAGGAGACAGAGGCCAA...AAGAGATCTCGTGTGGGTACTTGTCATGAAAACACCTTGGGCATCATCTGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp AGTACTTCTAAAAAGCTCAACAGCCTTCCAGGATTGGAGAAGTCCCATAACCTGAGTCCGGGATCAAACTaGACGTCCGTGCTGGGCGTG +
Preference number: 5 (lower is better)
Translates to: STSKKLNSLPGLEKSHNLSPGSN*TSVLGV
Trigger: CACGCCCAGCACGGACGTCAAGTTTGATCCCGGACT...CAGGTTATGGGACTTCTCCAATCCTGGAAGGCTGTTGAGCTTTTTAGAAGTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp TCTAGAGTTGGTGGGAAGAAACTCTGCTGGATCTACTCACCTGCAGATCTTCCAGGCAATGTACTGGAATaGCCGGTCCTTCTCCGTGCA +
Preference number: 5 (lower is better)
Translates to: SRVGGKKLCWIYSPADLPGNVLE*PVLLRA
Trigger: TGCACGGAGAAGGACCGGCAATTCCAGTACATTGCC...TGGAAGATCTGCAGGTGAGTAGATCCAGCAGAGTTTCTTCCCACCAACTCTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp GAGATTAGAAAGGGGTTAGAAAGCTCGGGAAATGTTGGCAAAACACCCTTTCATCTCACCACGAGCCTCTaGTTCCACCGGCCTTGGGGA +
Preference number: 5 (lower is better)
Translates to: EIRKGLESSGNVGKTPFHLTTSL*FHRPWG
Trigger: TCCCCAAGGCCGGTGGAACAAGAGGCTCGTGGTGAG...ATGAAAGGGTGTTTTGCCAACATTTCCCGAGCTTTCTAACCCCTTTCTAATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR CAA 90 bp CCCTCCTTTGCAGACATCATGACCGTAAGGCTTTTGGGGCCAGCATCTTCCCAGAGGAAAGCAGAAGTTTaGCCTGTCTTGTTCATCGCT +
Preference number: 5 (lower is better)
Translates to: PSFADIMTVRLLGPASSQRKAEV*PVLFIA
Trigger: AGCGATGAACAAGACAGGCAAAACTTCTGCTTTCCT...CTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAAGGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp CCAGCATCTTCCCAGTTCCCTGTAGGTCACGAGGGGCCACTTCTCCCACTTCCTATCTGCATGAACGGTTaGATCAGCAACCAATTAATC +
Preference number: 5 (lower is better)
Translates to: PASSQFPVGHEGPLLPLPICMNG*ISNQLI
Trigger: GATTAATTGGTTGCTGATCAAACCGTTCATGCAGAT...AGGAAGTGGGAGAAGTGGCCCCTCGTGACCTACAGGGAACTGGGAAGATGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp GAAAAGCCAATGTCCTCACACCAGCCACTAGGCCCTACACCAGTGGTATCCGTATCTGCCTTTTTCATTTaGGGGTCCTACAGAACAGGG +
Preference number: 5 (lower is better)
Translates to: EKPMSSHQPLGPTPVVSVSAFFI*GSYRTG
Trigger: CCCTGTTCTGTAGGACCCCAAAATGAAAAAGGCAGA...TACGGATACCACTGGTGTAGGGCCTAGTGGCTGGTGTGAGGACATTGGCTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS TCA 90 bp GGGCTTCTCCTCCACATCCCGAGACACGGTGGTAGGTGCGTTTTCTaGAGTCTGGTCAACCAGGTTGATAACTTCCTCAAAGCTCTTTTT +
Preference number: 5 (lower is better)
Translates to: GLLLHIPRHGGRCVF*SLVNQVDNFLKALF
Trigger: AAAAAGAGCTTTGAGGAAGTTATCAACCTGGTTGACCAGACTTCAGAAAACGCACCTACCACCGTGTCTCGGGATGTGGAGGAGAAGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433197.4
ENST00000680433.1
ENST00000680625.1
CDS-3UTR CAA 90 bp TGCAAAGCCGGGAGGCATCAAGCTCTAATTGTGGTGACCAGGCCCTCAGTCACAAACTTCCATCCAGCGTaGACACAAACAACAAGGTTT +
Preference number: 5 (lower is better)
Translates to: CKAGRHQALIVVTRPSVTNFHPA*TQTTRF
Trigger: AAACCTTGTTGTTTGTGTCAACGCTGGATGGAAGTT...TGTGACTGAGGGCCTGGTCACCACAATTAGAGCTTGATGCCTCCCGGCTTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp CGGCACCCTATATCCTGCCTAGCTCAATACACTAAGTGCTCAAATAAAATACATACGGCCACGTCGCGGTaGTCAAACATGCCCCGGTAC +
Preference number: 5 (lower is better)
Translates to: RHPISCLAQYTKCSNKIHTATSR*SNMPRY
Trigger: GTACCGGGGCATGTTTGACAACCGCGACGTGGCCGT...ATGTATTTTATTTGAGCACTTAGTGTATTGAGCTAGGCAGGATATAGGGTGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp TCTAGAGTTGGTGGGAAGAAACTCTGCTGGATCTACTCACCTGCAGATCTTCCATCTTCGCTGCTCTCCTaGAAGGCCAGGGAACTCTTT +
Preference number: 5 (lower is better)
Translates to: SRVGGKKLCWIYSPADLPSSLLS*KARELF
Trigger: AAAGAGTTCCCTGGCCTTCAAGGAGAGCAGCGAAGA...TGGAAGATCTGCAGGTGAGTAGATCCAGCAGAGTTTCTTCCCACCAACTCTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp TCTAGAGTTGGTGGGAAGAAACTCTGCTGGATCTACTCACCTGCAGATCTTCCACCTTCTGATCCTCTCTaGGGTTACTGCCAAAGCCCA +
Preference number: 5 (lower is better)
Translates to: SRVGGKKLCWIYSPADLPPSDPL*GYCQSP
Trigger: TGGGCTTTGGCAGTAACCCAAGAGAGGATCAGAAGG...TGGAAGATCTGCAGGTGAGTAGATCCAGCAGAGTTTCTTCCCACCAACTCTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp TTAAGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCAAGGAAAGCAGAAGTTTaGCCTGTCTTGTTCATCGCT +
Preference number: 5 (lower is better)
Translates to: LRLLQWEAHCSHVLCGFPRKAEV*PVLFIA
Trigger: AGCGATGAACAAGACAGGCAAAACTTCTGCTTTCCT...TGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp ACTGCGTTCTGCACATCACTGTTGCCTGGTTTAACTGCAAACTTTGCTATGAGTATCGAGGCGCGAAGCTaGTCTGTGGCTGGGAAAGAC +
Preference number: 5 (lower is better)
Translates to: TAFCTSLLPGLTANFAMSIEARS*SVAGKD
Trigger: GTCTTTCCCAGCCACAGACAAGCTTCGCGCCTCGAT...ACTCATAGCAAAGTTTGCAGTTAAACCAGGCAACAGTGATGTGCAGAACGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR CAA 90 bp CTTTCACCTGAAAAACGGAGTCCAAATCTGGGGCAGGCAAATAATGAAACCCTCTTCCCACAGCTCCACTaGCTCAAGGAAGTCTCGGTG +
Preference number: 5 (lower is better)
Translates to: LSPEKRSPNLGQANNETLFPQLH*LKEVSV
Trigger: CACCGAGACTTCCTTGAGCAAGTGGAGCTGTGGGAA...GAGGGTTTCATTATTTGCCTGCCCCAGATTTGGACTCCGTTTTTCAGGTGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR CAA 90 bp GCGGCCTCACCTCGAACCCATGCGGGATCTTCCAAGAGTGCAATTCCCACAGCTATAATACCAATGTTATaGCGTTTTGGATCTGGTAGC +
Preference number: 5 (lower is better)
Translates to: AASPRTHAGSSKSAIPTAIIPML*RFGSGS
Trigger: GCTACCAGATCCAAAACGCAATAACATTGGTATTAT...AGCTGTGGGAATTGCACTCTTGGAAGATCCCGCATGGGTTCGAGGTGAGGCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR CAA 90 bp TTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTGTTTTCATGACAGCAACAGCCTGCAGTTaGCCAAGTCCAGCTGAAGCC +
Preference number: 5 (lower is better)
Translates to: FSRLELDTPDDAQGVFMTATACS*PSPAEA
Trigger: GGCTTCAGCTGGACTTGGCAAACTGCAGGCTGTTGC...TGTCATGAAAACACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR CAA 90 bp TTTGCAGACATCATGACCGTAAGGCTTTTGGGGCCAGCATCTTCCCAGTTCCCTGTGGGGTCCCCGCATTaGAGGTATGTTTATACATGT +
Preference number: 5 (lower is better)
Translates to: FADIMTVRLLGPASSQFPVGSPH*RYVYTC
Trigger: ACATGTATAAACATACCTCAAATGCGGGGACCCCAC...AGGGAACTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR CAA 90 bp AAAAGGGTTTGCCTGTTTTGTTCACTTGCTGTATCCTCAGGACCTAGAGTAGCAGGCTCTCTTCTTGGCTaGCAGACGGCCACCTTCTCA +
Preference number: 5 (lower is better)
Translates to: KRVCLFCSLAVSSGPRVAGSLLG*QTATFS
Trigger: TGAGAAGGTGGCCGTCTGCAAGCCAAGAAGAGAGCC...TGCTACTCTAGGTCCTGAGGATACAGCAAGTGAACAAAACAGGCAAACCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS TCA 90 bp CAGAAGAACGGGTGTTTGAGCACATGCTTCGCTGAGGGGCGTTTCTaGGGATCCATCGCAATCATCTTCTCTATCAATTCACGTGCAATG +
Preference number: 5 (lower is better)
Translates to: QKNGCLSTCFAEGRF*GSIAIIFSINSRAM
Trigger: CATTGCACGTGAATTGATAGAGAAGATGATTGCGATGGATCCTCAGAAACGCCCCTCAGCGAAGCATGTGCTCAAACACCCGTTCTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433197.4
ENST00000680433.1
ENST00000680625.1
CDS-3UTR CAA 90 bp AGTACTTCTAAAAAGCTCAACAGCCTTCCAGGATTGGAGAAGTCCCATAACCTGGCTCTTCCACATGTGTaGGGACCTGCAGGACTGGAT +
Preference number: 5 (lower is better)
Translates to: STSKKLNSLPGLEKSHNLALPHV*GPAGLD
Trigger: ATCCAGTCCTGCAGGTCCCAACACATGTGGAAGAGC...CAGGTTATGGGACTTCTCCAATCCTGGAAGGCTGTTGAGCTTTTTAGAAGTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp TTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTGTTTTCATGACACGGAGCTCTCGGGTTTaGGTGTCGTACATGGTGATG +
Preference number: 5 (lower is better)
Translates to: FSRLELDTPDDAQGVFMTRSSRV*VSYMVM
Trigger: CATCACCATGTACGACACCAAAACCCGAGAGCTCCG...TGTCATGAAAACACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp ACACCAGATGATGCCCAAGGTGTTTTCATGACAAGTACCCACACGAGATCTCTTACCAGCCCATCACCATaGGACACAAAGTGGGACATC +
Preference number: 5 (lower is better)
Translates to: TPDDAQGVFMTSTHTRSLTSPSP*DTKWDI
Trigger: GATGTCCCACTTTGTGTCCAATGGTGATGGGCTGGT...AAGAGATCTCGTGTGGGTACTTGTCATGAAAACACCTTGGGCATCATCTGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp CGGCACCCTATATCCTGCCTAGCTCAATACACTAAGTGCTCAAATAAAATACATAGAGTGGGCGTCAGCTaGCTCTTGGCCTCTGTCTCC +
Preference number: 5 (lower is better)
Translates to: RHPISCLAQYTKCSNKIHRVGVS*LLASVS
Trigger: GGAGACAGAGGCCAAGAGCAAGCTGACGCCCACTCT...ATGTATTTTATTTGAGCACTTAGTGTATTGAGCTAGGCAGGATATAGGGTGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp TCTAGAGTTGGTGGGAAGAAACTCTGCTGGATCTACTCACCTGCAGATCTTCCATGGCCCAGGACATCCTaGGGACAGAAGGAAATTTTC +
Preference number: 5 (lower is better)
Translates to: SRVGGKKLCWIYSPADLPWPRTS*GQKEIF
Trigger: GAAAATTTCCTTCTGTCCCAAGGATGTCCTGGGCCA...TGGAAGATCTGCAGGTGAGTAGATCCAGCAGAGTTTCTTCCCACCAACTCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp CGGCACCCTATATCCTGCCTAGCTCAATACACTAAGTGCTCAAATAAAATACATCCCACTGCCAGCTTCTaGCAGAGGCCAAAGTCGGAG +
Preference number: 5 (lower is better)
Translates to: RHPISCLAQYTKCSNKIHPTASF*QRPKSE
Trigger: CTCCGACTTTGGCCTCTGCAAGAAGCTGGCAGTGGG...ATGTATTTTATTTGAGCACTTAGTGTATTGAGCTAGGCAGGATATAGGGTGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp ATCACCTGGGTACTCCCAAAGAGAAAACCTGTGCTGAGAACGAGCTGGGCTGGGGCAGCAAGAAAAGAATaGCCAAAGATAACTGAATCG +
Preference number: 5 (lower is better)
Translates to: ITWVLPKRKPVLRTSWAGAARKE*PKITES
Trigger: CGATTCAGTTATCTTTGGCAATTCTTTTCTTGCTGC...CCCAGCCCAGCTCGTTCTCAGCACAGGTTTTCTCTTTGGGAGTACCCAGGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp CCCTCCTTTGCAGACATCATGACCGTAAGGCTTTTGGGGCCAGCATCTTCCCAGGCAGCAAGAAAAGAATaGCCAAAGATAACTGAATCG +
Preference number: 5 (lower is better)
Translates to: PSFADIMTVRLLGPASSQAARKE*PKITES
Trigger: CGATTCAGTTATCTTTGGCAATTCTTTTCTTGCTGC...CTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAAGGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp TTTGCAGACATCATGACCGTAAGGCTTTTGGGGCCAGCATCTTCCCAGTTCCCTGAGGGGAGTAGACCATaGGGTTTAAAAGATGATGTC +
Preference number: 5 (lower is better)
Translates to: FADIMTVRLLGPASSQFPEGSRP*GLKDDV
Trigger: GACATCATCTTTTAAACCCAATGGTCTACTCCCCTC...AGGGAACTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp GGGAAACCAGAATTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTCTGCAGTCACGTTCTTaGTGGCTTTCCAACGTCTAC +
Preference number: 5 (lower is better)
Translates to: GKPEFSRLELDTPDDAQGLQSRS*WLSNVY
Trigger: GTAGACGTTGGAAAGCCACAAAGAACGTGACTGCAG...ACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAATTCTGGTTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp GTACAACCAAGGATTGCCCTGCATCTGCATGCCACTCTGATGTCCTGCCAGACAGGAGAGGACACAGTTTaGTTGCATACAGATGACATT +
Preference number: 5 (lower is better)
Translates to: VQPRIALHLHATLMSCQTGEDTV*LHTDDI
Trigger: AATGTCATCTGTATGCAACAAAACTGTGTCCTCTCC...TGTCTGGCAGGACATCAGAGTGGCATGCAGATGCAGGGCAATCCTTGGTTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR CAA 90 bp TCTGCTAGTTACCACCAGGAAGATCAGATCATAACATGGACGCATGGTATGTTAAGGGCATGTTGCTCCTaGCCTCAGGTTCCTCCAACG +
Preference number: 5 (lower is better)
Translates to: SASYHQEDQIITWTHGMLRACCS*PQVPPT
Trigger: CGTTGGAGGAACCTGAGGCAAGGAGCAACATGCCCT...TAACATACCATGCGTCCATGTTATGATCTGATCTTCCTGGTGGTAACTAGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS TCA 90 bp AAGTTTCTGGAGACAGGAACTCTTACCCATGTAGAGGATTCCATCTaGACTTCGGCATGGGGATGCCTGCACCAATTCTGGGATGGTAAA +
Preference number: 5 (lower is better)
Translates to: KFLETGTLTHVEDSI*TSAWGCLHQFWDGK
Trigger: TTTACCATCCCAGAATTGGTGCAGGCATCCCCATGCCGAAGTTCAGATGGAATCCTCTACATGGGTAAGAGTTCCTGTCTCCAGAAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584041.1
CDS-3UTR CAA 90 bp GACAGAGAAAGGAACGGCTCTGGGAAAGCCAAACCTGGCCAAAGTCCAACTTCCTCTTTTAAAGTCCATTaGATTGAGCCTGTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: DRERNGSGKAKPGQSPTSSFKVH*IEPVLL
Trigger: CAAGAGGACAGGCTCAATCAAATGGACTTTAAAAGA...GGAAGTTGGACTTTGGCCAGGTTTGGCTTTCCCAGAGCCGTTCCTTTCTCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp TCTGTGATCAATGAGAAATCTCACACTGCAGGACGACACCCTCTGAACTCCGTCATGGATATGAGGATGTaGTGTGGCTTTAGGTCTCTG +
Preference number: 5 (lower is better)
Translates to: SVINEKSHTAGRHPLNSVMDMRM*CGFRSL
Trigger: CAGAGACCTAAAGCCACACAACATCCTCATATCCAT...GACGGAGTTCAGAGGGTGTCGTCCTGCAGTGTGAGATTTCTCATTGATCACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp TTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTGTTTTCATGACAATCATGGCCTTGATCTaGCCGTGTGCATTGGGCATG +
Preference number: 5 (lower is better)
Translates to: FSRLELDTPDDAQGVFMTIMALI*PCALGM
Trigger: CATGCCCAATGCACACGGCAAGATCAAGGCCATGAT...TGTCATGAAAACACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp CGGCACCCTATATCCTGCCTAGCTCAATACACTAAGTGCTCAAATAAAATACATCTTGTTCCACCGGCCTaGGGGACGAAGGAGTTTGAC +
Preference number: 5 (lower is better)
Translates to: RHPISCLAQYTKCSNKIHLVPPA*GTKEFD
Trigger: GTCAAACTCCTTCGTCCCCAAGGCCGGTGGAACAAG...ATGTATTTTATTTGAGCACTTAGTGTATTGAGCTAGGCAGGATATAGGGTGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp TTAAGGCTGCTCCAGTGGGAGGCTCACTGCAGTCACGTTCTTTGTGGCTTTCCAAAATGGTCAAGGGTGTaGTCCAAAACAAATCTGATG +
Preference number: 5 (lower is better)
Translates to: LRLLQWEAHCSHVLCGFPKWSRV*SKTNLM
Trigger: CATCAGATTTGTTTTGGACAACACCCTTGACCATTT...TGGAAAGCCACAAAGAACGTGACTGCAGTGAGCCTCCCACTGGAGCAGCCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp GCACCTTCTCCACCTTCTGATCCTCTCTTGGGTTACTGCCAAAGCCCACAGGTACTAAAACTACCTTTATaGTGGTTGGCTCGACATAAG +
Preference number: 5 (lower is better)
Translates to: APSPPSDPLLGYCQSPQVLKLPL*WLARHK
Trigger: CTTATGTCGAGCCAACCACAATAAAGGTAGTTTTAG...TACCTGTGGGCTTTGGCAGTAACCCAAGAGAGGATCAGAAGGTGGAGAAGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp GAAAAGCCAATGTCCTCACACCAGCCACTAGGCCCTACACCAGTGGTATCCGTAGAGGACACAGTTTTGTaGCATACAGATGACATTACT +
Preference number: 5 (lower is better)
Translates to: EKPMSSHQPLGPTPVVSVEDTVL*HTDDIT
Trigger: AGTAATGTCATCTGTATGCAACAAAACTGTGTCCTC...TACGGATACCACTGGTGTAGGGCCTAGTGGCTGGTGTGAGGACATTGGCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR CAA 90 bp GAACCTGTAATAAAACACTCTACAGTCTTCCTGTGGCCACACACTCCTGAGAGAGATTCTATTTCTGGCTaGCCTCTCACCCTTCCCATC +
Preference number: 5 (lower is better)
Translates to: EPVIKHSTVFLWPHTPERDSISG*PLTLPI
Trigger: GATGGGAAGGGTGAGAGGCAAGCCAGAAATAGAATC...TCTCTCAGGAGTGTGTGGCCACAGGAAGACTGTAGAGTGTTTTATTACAGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR CAA 90 bp ACACCAGATGATGCCCAAGGTGTTTTCATGACAAGTACCCACACGAGATCTCTTATTGAGCCTGTCCTCTaGCTGACAGCATGCAAACTT +
Preference number: 5 (lower is better)
Translates to: TPDDAQGVFMTSTHTRSLIEPVL*LTACKL
Trigger: AAGTTTGCATGCTGTCAGCAAGAGGACAGGCTCAAT...AAGAGATCTCGTGTGGGTACTTGTCATGAAAACACCTTGGGCATCATCTGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp TCTAGAGTTGGTGGGAAGAAACTCTGCTGGATCTACTCACCTGCAGATCTTCCAAGCTTGTTCTTGCTTTaGAGTCCGGGATCAAACTTG +
Preference number: 5 (lower is better)
Translates to: SRVGGKKLCWIYSPADLPSLFLL*SPGSNL
Trigger: CAAGTTTGATCCCGGACTCAAAAGCAAGAACAAGCT...TGGAAGATCTGCAGGTGAGTAGATCCAGCAGAGTTTCTTCCCACCAACTCTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp TTTGCAGACATCATGACCGTAAGGCTTTTGGGGCCAGCATCTTCCCAGTTCCCTACATTTTCCCGATGTTaGGGTAGATTGTTGGGAAAT +
Preference number: 5 (lower is better)
Translates to: FADIMTVRLLGPASSQFPTFSRC*GRLLGN
Trigger: ATTTCCCAACAATCTACCCAAACATCGGGAAAATGT...AGGGAACTGGGAAGATGCTGGCCCCAAAAGCCTTACGGTCATGATGTCTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp GGGAAACCAGAATTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTATGGATATGAGGATGTaGTGTGGCTTTAGGTCTCTG +
Preference number: 5 (lower is better)
Translates to: GKPEFSRLELDTPDDAQGMDMRM*CGFRSL
Trigger: CAGAGACCTAAAGCCACACAACATCCTCATATCCAT...ACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAATTCTGGTTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp AGTACTTCTAAAAAGCTCAACAGCCTTCCAGGATTGGAGAAGTCCCATAACCTGATCTTGCCGTGTGCATaGGGCATGGATATGAGGATG +
Preference number: 5 (lower is better)
Translates to: STSKKLNSLPGLEKSHNLILPCA*GMDMRM
Trigger: CATCCTCATATCCATGCCCAATGCACACGGCAAGAT...CAGGTTATGGGACTTCTCCAATCCTGGAAGGCTGTTGAGCTTTTTAGAAGTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp AGTACTTCTAAAAAGCTCAACAGCCTTCCAGGATTGGAGAAGTCCCATAACCTGCCTTCCCCACACACTTaGGTTTCTTTGTGGCAGCAA +
Preference number: 5 (lower is better)
Translates to: STSKKLNSLPGLEKSHNLPSPHT*VSLWQQ
Trigger: TTGCTGCCACAAAGAAACCAAAGTGTGTGGGGAAGG...CAGGTTATGGGACTTCTCCAATCCTGGAAGGCTGTTGAGCTTTTTAGAAGTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp GAACCTGTAATAAAACACTCTACAGTCTTCCTGTGGCCACACACTCCTGAGAGAGCCTGTTTTGTTCACTaGCTGTATCCTCAGGACCTA +
Preference number: 5 (lower is better)
Translates to: EPVIKHSTVFLWPHTPERACFVH*LYPQDL
Trigger: TAGGTCCTGAGGATACAGCAAGTGAACAAAACAGGC...TCTCTCAGGAGTGTGTGGCCACAGGAAGACTGTAGAGTGTTTTATTACAGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR CAA 90 bp GTACAACCAAGGATTGCCCTGCATCTGCATGCCACTCTGATGTCCTGCCAGACACTGTACTTCTTTTGTTaGAAACACTACCAAGAACAG +
Preference number: 5 (lower is better)
Translates to: VQPRIALHLHATLMSCQTLYFFC*KHYQEQ
Trigger: CTGTTCTTGGTAGTGTTTCAAACAAAAGAAGTACAG...TGTCTGGCAGGACATCAGAGTGGCATGCAGATGCAGGGCAATCCTTGGTTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR CAA 90 bp GTACAACCAAGGATTGCCCTGCATCTGCATGCCACTCTGATGTCCTGCCAGACAAAGGCTGTACTTCTTTaGTTTGAAACACTACCAAGA +
Preference number: 5 (lower is better)
Translates to: VQPRIALHLHATLMSCQTKAVLL*FETLPR
Trigger: TCTTGGTAGTGTTTCAAACAAAAGAAGTACAGCCTT...TGTCTGGCAGGACATCAGAGTGGCATGCAGATGCAGGGCAATCCTTGGTTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR CAA 90 bp ACACCAGATGATGCCCAAGGTGTTTTCATGACAAGTACCCACACGAGATCTCTTAGGCCTTCATTATTCTaGCTTCCAAGCGTATACAGG +
Preference number: 5 (lower is better)
Translates to: TPDDAQGVFMTSTHTRSLRPSLF*LPSVYR
Trigger: CCTGTATACGCTTGGAAGCAAGAATAATGAAGGCCT...AAGAGATCTCGTGTGGGTACTTGTCATGAAAACACCTTGGGCATCATCTGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp CTACAGACCAAACAGCTAAGCCGCAACACGATATGTGATGGTGCAGAGCTGTTCACATTTTCCCGATGTTaGGGTAGATTGTTGGGAAAT +
Preference number: 5 (lower is better)
Translates to: LQTKQLSRNTICDGAELFTFSRC*GRLLGN
Trigger: ATTTCCCAACAATCTACCCAAACATCGGGAAAATGT...GAACAGCTCTGCACCATCACATATCGTGTTGCGGCTTAGCTGTTTGGTCTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp TTCTCGAGACTAGAACTGGATACACCAGATGATGCCCAAGGTGTTTTCATGACAGTCTGGTCAACCAGGTaGATAACTTCCTCAAAGCTC +
Preference number: 5 (lower is better)
Translates to: FSRLELDTPDDAQGVFMTVWSTR*ITSSKL
Trigger: GAGCTTTGAGGAAGTTATCAACCTGGTTGACCAGAC...TGTCATGAAAACACCTTGGGCATCATCTGGTGTATCCAGTTCTAGTCTCGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp AAGACTCAAGAAGCAACAAGAGAAATTCTGGCACACGTGCCCAAGAGAGGTTTAGTCTGGTCAACCAGGTaGATAACTTCCTCAAAGCTC +
Preference number: 5 (lower is better)
Translates to: KTQEATREILAHVPKRGLVWSTR*ITSSKL
Trigger: GAGCTTTGAGGAAGTTATCAACCTGGTTGACCAGAC...TAAACCTCTCTTGGGCACGTGTGCCAGAATTTCTCTTGTTGCTTCTTGAGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp AACACCCTTTCATCATGCAAGGAAGAGACAGAATGTGAGTGTTGGTTTTTGGTATCGGAGATCATGGCCTaGATCTTGCCGTGTGCATTG +
Preference number: 5 (lower is better)
Translates to: NTLSSCKEETECECWFLVSEIMA*ILPCAL
Trigger: CAATGCACACGGCAAGATCAAGGCCATGATCTCCGA...TACCAAAAACCAACACTCACATTCTGTCTCTTCCTTGCATGATGAAAGGGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR CAA 90 bp CTACAGACCAAACAGCTAAGCCGCAACACGATATGTGATGGTGCAGAGCTGTTCATCTGCATGAACGGTTaGATCAGCAACCAATTAATC +
Preference number: 5 (lower is better)
Translates to: LQTKQLSRNTICDGAELFICMNG*ISNQLI
Trigger: GATTAATTGGTTGCTGATCAAACCGTTCATGCAGAT...GAACAGCTCTGCACCATCACATATCGTGTTGCGGCTTAGCTGTTTGGTCTGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp GAGATTAGAAAGGGGTTAGAAAGCTCGGGAAATGTTGGCAAAACACCCTTTCATCAAAATAACTCCAGGTaGGTGAGGGAAGGGACAAGG +
Preference number: 5 (lower is better)
Translates to: EIRKGLESSGNVGKTPFHQNNSR*VREGTR
Trigger: CCTTGTCCCTTCCCTCACCAACCTGGAGTTATTTTG...ATGAAAGGGTGTTTTGCCAACATTTCCCGAGCTTTCTAACCCCTTTCTAATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR CAA 90 bp GCCGCAACACGATATGTGATGGTGCAGAGCTGTTCTGGCCTGAAAAGAACTTTCCTAAAACTACCTTTATaGTGGTTGGCTCGACATAAG +
Preference number: 5 (lower is better)
Translates to: AATRYVMVQSCSGLKRTFLKLPL*WLARHK
Trigger: CTTATGTCGAGCCAACCACAATAAAGGTAGTTTTAG...GAAAGTTCTTTTCAGGCCAGAACAGCTCTGCACCATCACATATCGTGTTGCGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp GCTGTGCTCGTGAAAGTAATGAGTCACAGAGTAGTGACGAAAGAGAACGATGCTAAGGGTTTGCCTGTTTaGTTCACTTGCTGTATCCTC +
Preference number: 5 (lower is better)
Translates to: AVLVKVMSHRVVTKENDAKGLPV*FTCCIL
Trigger: GAGGATACAGCAAGTGAACAAAACAGGCAAACCCTT...AGCATCGTTCTCTTTCGTCACTACTCTGTGACTCATTACTTTCACGAGCACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR CAA 90 bp TGGTGCCTTCTTTCACATGTTAGCTGTCCCCATTTCACCTATCAGGAAGGAGTCATTGTACTGATCTCTTaGGTAATTGAGAGATGTGGC +
Preference number: 5 (lower is better)
Translates to: WCLLSHVSCPHFTYQEGVIVLIS*VIERCG
Trigger: GCCACATCTCTCAATTACCAAAGAGATCAGTACAAT...GACTCCTTCCTGATAGGTGAAATGGGGACAGCTAACATGTGAAAGAAGGCACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR CAA 90 bp GAACCTGTAATAAAACACTCTACAGTCTTCCTGTGGCCACACACTCCTGAGAGAAAGGAAGGAAAAACATaGGCTGTGCTCGTGAAAGTA +
Preference number: 5 (lower is better)
Translates to: EPVIKHSTVFLWPHTPERKEGKT*AVLVKV
Trigger: TACTTTCACGAGCACAGCCAATGTTTTTCCTTCCTT...TCTCTCAGGAGTGTGTGGCCACAGGAAGACTGTAGAGTGTTTTATTACAGGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS GCA 90 bp TCTTTTAAAGTCCATTTGATTGAGCCTGTCCTCTTGCTGACAGCATaGAAACTTCCATCCAGCGTTGACACAAACAACAAGGTTTCAGGA +
Preference number: 5 (lower is better)
Translates to: SFKVHLIEPVLLLTA*KLPSSVDTNNKVSG
Trigger: TCCTGAAACCTTGTTGTTTGTGTCAACGCTGGATGGAAGTTTGCATGCTGTCAGCAAGAGGACAGGCTCAATCAAATGGACTTTAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433197.4
ENST00000584041.1
ENST00000680433.1
ENST00000680493.1
CDS-3UTR CAA 90 bp AGTACTTCTAAAAAGCTCAACAGCCTTCCAGGATTGGAGAAGTCCCATAACCTGTTGGTGCCTAATGACTaGTGGAGCACTTCAAAAACT +
Preference number: 5 (lower is better)
Translates to: STSKKLNSLPGLEKSHNLLVPND*WSTSKT
Trigger: AGTTTTTGAAGTGCTCCACAAGTCATTAGGCACCAA...CAGGTTATGGGACTTCTCCAATCCTGGAAGGCTGTTGAGCTTTTTAGAAGTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp CGGCACCCTATATCCTGCCTAGCTCAATACACTAAGTGCTCAAATAAAATACATTTCCACGTTTACTTTTaGGAAAGGCGGCAGCGACTT +
Preference number: 5 (lower is better)
Translates to: RHPISCLAQYTKCSNKIHFHVYF*ERRQRL
Trigger: AAGTCGCTGCCGCCTTTCCAAAAAGTAAACGTGGAA...ATGTATTTTATTTGAGCACTTAGTGTATTGAGCTAGGCAGGATATAGGGTGCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS-3UTR CAA 90 bp AGTACTTCTAAAAAGCTCAACAGCCTTCCAGGATTGGAGAAGTCCCATAACCTGTCTTTTAAAGTCCATTaGATTGAGCCTGTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: STSKKLNSLPGLEKSHNLSFKVH*IEPVLL
Trigger: CAAGAGGACAGGCTCAATCAAATGGACTTTAAAAGA...CAGGTTATGGGACTTCTCCAATCCTGGAAGGCTGTTGAGCTTTTTAGAAGTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp GGATTCTTTCACCTGAAAAACGGAGTCCAAATCTGGGGCAGGCAAATAATGAAACGGAAATATGGGCTATaGTTGAACTCTCTCTCGAAT +
Preference number: 5 (lower is better)
Translates to: GFFHLKNGVQIWGRQIMKRKYGL*LNSLSN
Trigger: ATTCGAGAGAGAGTTCAACAATAGCCCATATTTCCG...TTTCATTATTTGCCTGCCCCAGATTTGGACTCCGTTTTTCAGGTGAAAGAATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR CAA 90 bp GCTGTGCTCGTGAAAGTAATGAGTCACAGAGTAGTGACGAAAGAGAACGATGCTGTACAGATGATGTTCTaGGAACCTGTAATAAAACAC +
Preference number: 5 (lower is better)
Translates to: AVLVKVMSHRVVTKENDAVQMMF*EPVIKH
Trigger: GTGTTTTATTACAGGTTCCAAGAACATCATCTGTAC...AGCATCGTTCTCTTTCGTCACTACTCTGTGACTCATTACTTTCACGAGCACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR CAA 90 bp CGGCACCCTATATCCTGCCTAGCTCAATACACTAAGTGCTCAAATAAAATACATTTGGTGCCTAATGACTaGTGGAGCACTTCAAAAACT +
Preference number: 5 (lower is better)
Translates to: RHPISCLAQYTKCSNKIHLVPND*WSTSKT
Trigger: AGTTTTTGAAGTGCTCCACAAGTCATTAGGCACCAA...ATGTATTTTATTTGAGCACTTAGTGTATTGAGCTAGGCAGGATATAGGGTGCCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433197.4
ENST00000680433.1
CDS-3UTR CAA 90 bp ACTGCGTTCTGCACATCACTGTTGCCTGGTTTAACTGCAAACTTTGCTATGAGTCCTCAGTATAAACACTaGATATCGCCTATTAGGATA +
Preference number: 5 (lower is better)
Translates to: TAFCTSLLPGLTANFAMSPQYKH*ISPIRI
Trigger: TATCCTAATAGGCGATATCAAGTGTTTATACTGAGG...ACTCATAGCAAAGTTTGCAGTTAAACCAGGCAACAGTGATGTGCAGAACGCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR CAA 90 bp CACCAGGAAGATCAGATCATAACATGGACGCATGGTATGTTAAGTAAGAAAGAAAACTTCCATCCAGCGTaGACACAAACAACAAGGTTT +
Preference number: 5 (lower is better)
Translates to: HQEDQIITWTHGMLSKKENFHPA*TQTTRF
Trigger: AAACCTTGTTGTTTGTGTCAACGCTGGATGGAAGTT...TTCTTTCTTACTTAACATACCATGCGTCCATGTTATGATCTGATCTTCCTGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1
CDS-3UTR CAA 90 bp CAAAATATTGAACCTACATATTACTTTGGATCCCGAAACCAAAGAGGTTTCCTAAGAACACGGACAAATTaGCCACGCTCACATCCTGAA +
Preference number: 5 (lower is better)
Translates to: QNIEPTYYFGSRNQRGFLRTRTN*PRSHPE
Trigger: TTCAGGATGTGAGCGTGGCAAATTTGTCCGTGTTCT...TAGGAAACCTCTTTGGTTTCGGGATCCAAAGTAATATGTAGGTTCAATATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS-3UTR CAA 90 bp ACAGAACACGGACAAATTTGCCACGCTCACATCCTGAACAATACATTTTGTGAAAACCTACATATTACTTaGGATCCCGAAACCAAAGAG +
Preference number: 5 (lower is better)
Translates to: TEHGQICHAHILNNTFCENLHIT*DPETKE
Trigger: CTCTTTGGTTTCGGGATCCAAAGTAATATGTAGGTT...TTCACAAAATGTATTGTTCAGGATGTGAGCGTGGCAAATTTGTCCGTGTTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS GCA 72 bp GCCGCGACTCCCGTCAGGGAAGCTCTCCCGGCCCGGTaGCGCCTCCTACGCCCGGCCCGAGCCTCCCACGGC +
Preference number: 6 (lower is better)
Translates to: AATPVREALPAR*RLLRPARASHG
Trigger: GCCGTGGGAGGCTCGGGCCGGGCGTAGGAGGCGGCACCGGGCCGGGAGAGCTTCCCTGACGGGAGTCGCGGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS CCA 72 bp AGCAGCCGCCGGGCCGGCATGGCGAGGACTCGGCCCTaGCTCCGGGGGCGGTACGGACAGAGGACGGGGCGG +
Preference number: 6 (lower is better)
Translates to: SSRRAGMARTRP*LRGRYGQRTGR
Trigger: CCGCCCCGTCCTCTGTCCGTACCGCCCCCGGAGCCAGGGCCGAGTCCTCGCCATGCCGGCCCGGCGGCTGCT
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000433197.4
ENST00000584041.1
ENST00000606895.2
ENST00000680433.1
CDS CCA 72 bp TGCCGCCTCCTACGCCCGGCCCGAGCCTCCCACGGCTaGGCTCACGGGGCATCTGGCCGCCGCCGTCGCGCT +
Preference number: 6 (lower is better)
Translates to: CRLLRPARASHG*AHGASGRRRRA
Trigger: AGCGCGACGGCGGCGGCCAGATGCCCCGTGAGCCCAGCCGTGGGAGGCTCGGGCCGGGCGTAGGAGGCGGCA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS CCA 72 bp GGCCCGAGCCTCCCACGGCTGGGCTCACGGGGCATCTaGCCGCCGCCGTCGCGCTCCCAGCTCGGACTCCAG +
Preference number: 6 (lower is better)
Translates to: GPSLPRLGSRGI*PPPSRSQLGLQ
Trigger: CTGGAGTCCGAGCTGGGAGCGCGACGGCGGCGGCCAGATGCCCCGTGAGCCCAGCCGTGGGAGGCTCGGGCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS GCA 72 bp GGCGGCACCCCCATTCCCGGCCCTATAAGCGCTGGGTaGCGCGGCTTCTTCCGGTCGGGGCGGAGTTGCGGG +
Preference number: 6 (lower is better)
Translates to: GGTPIPGPISAG*RGFFRSGRSCG
Trigger: CCCGCAACTCCGCCCCGACCGGAAGAAGCCGCGGCACCCAGCGCTTATAGGGCCGGGAATGGGGGTGCCGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS CCA 72 bp ATGGAGTCCACGGGGGCCTCGGGCCGGGCAGGGGCATaGGCGGGCTTCTCCTCCACATCCCGAGACACGGTG +
Preference number: 6 (lower is better)
Translates to: MESTGASGRAGA*AGFSSTSRDTV
Trigger: CACCGTGTCTCGGGATGTGGAGGAGAAGCCCGCCCATGCCCCTGCCCGGCCCGAGGCCCCCGTGGACTCCAT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000433197.4
ENST00000680433.1
ENST00000680625.1
CDS CCA 72 bp CAGCGGCGGCACCCCCATTCCCGGCCCTATAAGCGCTaGGTGCCGCGGCTTCTTCCGGTCGGGGCGGAGTTG +
Preference number: 6 (lower is better)
Translates to: QRRHPHSRPYKR*VPRLLPVGAEL
Trigger: CAACTCCGCCCCGACCGGAAGAAGCCGCGGCACCCAGCGCTTATAGGGCCGGGAATGGGGGTGCCGCCGCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS CAA 90 bp CTGCTGCCAGCCTTGGAGGCAGAGCTGCCGGAGCAGAGCGAGTGGTaGGAGGCCCTGGGGGACGTGCTGGGGCTGCTGGTGCCCGAGCTC +
Preference number: 6 (lower is better)
Translates to: LLPALEAELPEQSEW*EALGDVLGLLVPEL
Trigger: GAGCTCGGGCACCAGCAGCCCCAGCACGTCCCCCAGGGCCTCCAACCACTCGCTCTGCTCCGGCAGCTCTGCCTCCAAGGCTGGCAGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000433197.4
ENST00000680433.1
ENST00000680625.1
CDS TCA 72 bp AGCGAGGCGGTGACCGAGCCTCAGCGGACGCAGAACTaGCTAGGCAGCGGCGGCACCCCCATTCCCGGCCCT +
Preference number: 6 (lower is better)
Translates to: SEAVTEPQRTQN*LGSGGTPIPGP
Trigger: AGGGCCGGGAATGGGGGTGCCGCCGCTGCCTAGTCAGTTCTGCGTCCGCTGAGGCTCGGTCACCGCCTCGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS CCA 72 bp AAGGACCAGGCCTCGGCATCCAGCGTCTGGGGGCGCTaGGGGATCGAGGCGCGAAGCTTGTCTGTGGCTGGG +
Preference number: 6 (lower is better)
Translates to: KDQASASSVWGR*GIEARSLSVAG
Trigger: CCCAGCCACAGACAAGCTTCGCGCCTCGATCCCCCAGCGCCCCCAGACGCTGGATGCCGAGGCCTGGTCCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS TCA 72 bp GAGTACGGGCCAGACGTGTCCAGGAGCTCGCCGTCCTaGGCCGTGTCTCCAGGTGGGTGGAAGGGCAGCTGC +
Preference number: 6 (lower is better)
Translates to: EYGPDVSRSSPS*AVSPGGWKGSC
Trigger: GCAGCTGCCCTTCCACCCACCTGGAGACACGGCTCAGGACGGCGAGCTCCTGGACACGTCTGGCCCGTACTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433197.4
ENST00000680433.1
ENST00000680625.1
CDS TCA 72 bp CCGAAGGCGGTGCTGGCATCTGGCTGGCTTCGCTCATaGGGCGTCGGCGGCTGTAAAGGACCAGGCCTCGGC +
Preference number: 6 (lower is better)
Translates to: PKAVLASGWLRS*GVGGCKGPGLG
Trigger: GCCGAGGCCTGGTCCTTTACAGCCGCCGACGCCTCATGAGCGAAGCCAGCCAGATGCCAGCACCGCCTTCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS CCA 72 bp GTCCAGGAGCTCGCCGTCCTGAGCCGTGTCTCCAGGTaGGTGGAAGGGCAGCTGCTGCTGCTGCTGCTGCAG +
Preference number: 6 (lower is better)
Translates to: VQELAVLSRVSR*VEGQLLLLLLQ
Trigger: CTGCAGCAGCAGCAGCAGCAGCTGCCCTTCCACCCACCTGGAGACACGGCTCAGGACGGCGAGCTCCTGGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433197.4
ENST00000680433.1
ENST00000680625.1
CDS CCA 72 bp GCGCTGGGGGATCGAGGCGCGAAGCTTGTCTGTGGCTaGGAAAGACCGGCAATGCCCCACCAGGCCGTCCCA +
Preference number: 6 (lower is better)
Translates to: ALGDRGAKLVCG*ERPAMPHQAVP
Trigger: TGGGACGGCCTGGTGGGGCATTGCCGGTCTTTCCCAGCCACAGACAAGCTTCGCGCCTCGATCCCCCAGCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS TCA 72 bp GGTGGGCCAGGCCCGAGGTGGTCTGCTGCAGCAAGGTaGTGGGCTCCAGGCCGAGATGCGCAAAGTCCTTCT +
Preference number: 6 (lower is better)
Translates to: GGPGPRWSAAAR*WAPGRDAQSPS
Trigger: AGAAGGACTTTGCGCATCTCGGCCTGGAGCCCATCACCTTGCTGCAGCAGACCACCTCGGGCCTGGCCCACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433197.4
ENST00000680433.1
ENST00000680625.1
CDS CCA 72 bp CACTCCCCCTTGTCCCCAATGGTGACGCCATCAGTCTaGGGCCCTTCCAGCAAAGGAAGTGTGCTGCCGCGG +
Preference number: 6 (lower is better)
Translates to: HSPLSPMVTPSV*GPSSKGSVLPR
Trigger: CCGCGGCAGCACACTTCCTTTGCTGGAAGGGCCCCAGACTGATGGCGTCACCATTGGGGACAAGGGGGAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000433197.4
ENST00000583896.1
ENST00000680433.1
ENST00000680625.1
CDS CAA 90 bp TTCTCTGGGTGCAAGCAGTCAAGGCTGCAGGCACCCAGGAGGATGTaGGCCTGCCGCTGCAGGGACTTGCCAAAAGGGTGGCTGCCCTCA +
Preference number: 6 (lower is better)
Translates to: FSGCKQSRLQAPRRM*ACRCRDLPKGWLPS
Trigger: TGAGGGCAGCCACCCTTTTGGCAAGTCCCTGCAGCGGCAGGCCAACATCCTCCTGGGTGCCTGCAGCCTTGACTGCTTGCACCCAGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433197.4
ENST00000680433.1
ENST00000680625.1
CDS GCA 72 bp TTTCCTCATCTCCATCGTCTTGTTCCAGGGAGGGGCTaGTGCCAGCCTTGGAGGCAGAGCTGCCGGAGCAGA +
Preference number: 6 (lower is better)
Translates to: FPHLHRLVPGRG*CQPWRQSCRSR
Trigger: TCTGCTCCGGCAGCTCTGCCTCCAAGGCTGGCAGCAGCCCCTCCCTGGAACAAGACGATGGAGATGAGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433197.4
ENST00000680433.1
ENST00000680625.1
CDS TCA 72 bp ACGCTGCAGCATGATCACCTGTCTGGAGGGGGACAGTaGTGTTCTCCCGCCAGTCCATCTTCACCACGGCTC +
Preference number: 6 (lower is better)
Translates to: TLQHDHLSGGGQ*CSPASPSSPRL
Trigger: GAGCCGTGGTGAAGATGGACTGGCGGGAGAACATCACTGTCCCCCTCCAGACAGGTGATCATGCTGCAGCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS GCA 72 bp GCGGCAGCGACTTTTGCAACCTGCCCTCTCACACGCTaGAGCATGATCACCTGTCTGGAGGGGGACAGTGAT +
Preference number: 6 (lower is better)
Translates to: AAATFATCPLTR*SMITCLEGDSD
Trigger: ATCACTGTCCCCCTCCAGACAGGTGATCATGCTGCAGCGTGTGAGAGGGCAGGTTGCAAAAGTCGCTGCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS CCA 72 bp TGGAAGGGCAGCTGCTGCTGCTGCTGCTGCAGGAGCTaGATCTTCTCCAGTTCCTTCTGGAACTGCTGGTGC +
Preference number: 6 (lower is better)
Translates to: WKGSCCCCCCRS*IFSSSFWNCWC
Trigger: GCACCAGCAGTTCCAGAAGGAACTGGAGAAGATCCAGCTCCTGCAGCAGCAGCAGCAGCAGCTGCCCTTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433197.4
ENST00000680433.1
ENST00000680625.1
CDS CAA 72 bp AGAGTGGGCGTCAGCTTGCTCTTGGCCTCTGTCTCCTaGGGGAACGGGTACTTCCACTTTGTGATGCGCCCC +
Preference number: 6 (lower is better)
Translates to: RVGVSLLLASVS*GNGYFHFVMRP
Trigger: GGGGCGCATCACAAAGTGGAAGTACCCGTTCCCCAAGGAGACAGAGGCCAAGAGCAAGCTGACGCCCACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433197.4
ENST00000583896.1
ENST00000680433.1
ENST00000680625.1
CDS CAA 72 bp CACTCGGGGAGGATCCTCTTCACGGCCACGTCGCGGTaGTCAAACATGCCCCGGTACACAATTGTGCCCTCA +
Preference number: 6 (lower is better)
Translates to: HSGRILFTATSR*SNMPRYTIVPS
Trigger: TGAGGGCACAATTGTGTACCGGGGCATGTTTGACAACCGCGACGTGGCCGTGAAGAGGATCCTCCCCGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000433197.4
ENST00000583077.1
ENST00000680433.1
ENST00000680625.1
CDS GCA 72 bp GTCTGCTGCAGCAAGGTGATGGGCTCCAGGCCGAGATaGGCAAAGTCCTTCTGCTCCACATACTCTTGCAGG +
Preference number: 6 (lower is better)
Translates to: VCCSKVMGSRPR*AKSFCSTYSCR
Trigger: CCTGCAAGAGTATGTGGAGCAGAAGGACTTTGCGCATCTCGGCCTGGAGCCCATCACCTTGCTGCAGCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433197.4
ENST00000680433.1
ENST00000680625.1
CDS GCA 72 bp TGGCCTGCCGCTGCAGGGACTTGCCAAAAGGGTGGCTaGCCTCAGAGATTACGTAGTAAAAGACGCAGCCTG +
Preference number: 6 (lower is better)
Translates to: WPAAAGTCQKGG*PQRLRSKRRSL
Trigger: CAGGCTGCGTCTTTTACTACGTAATCTCTGAGGGCAGCCACCCTTTTGGCAAGTCCCTGCAGCGGCAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433197.4
ENST00000680433.1
ENST00000680625.1
CDS CCA 72 bp CGTCCTCAGGCAGTGAGGCCGCATAGTCAAAGTAGGTaGCATTCCACCGGAGCTCTCGGGTTTTGGTGTCGT +
Preference number: 6 (lower is better)
Translates to: RPQAVRPHSQSR*HSTGALGFWCR
Trigger: ACGACACCAAAACCCGAGAGCTCCGGTGGAATGCCACCTACTTTGACTATGCGGCCTCACTGCCTGAGGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433197.4
ENST00000579249.1
ENST00000680433.1
ENST00000680625.1
CDS CCA 72 bp GGTAGGGTTCTCCTTACAGTCTTCGCTCAGCATCTCTaGAGCGATCCAGCCTTCTGTGCCAGGCACCCCAGA +
Preference number: 6 (lower is better)
Translates to: GRVLLTVFAQHL*SDPAFCARHPR
Trigger: TCTGGGGTGCCTGGCACAGAAGGCTGGATCGCTCCAGAGATGCTGAGCGAAGACTGTAAGGAGAACCCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433197.4
ENST00000680433.1
ENST00000680625.1
CDS CCA 72 bp CGGGTGCCTAGAAGCCTCCTTTTCGTCTTTCCGCCGTaGTGGAATCATCCGCAAGGTTTACCGAGGCGACCT +
Preference number: 6 (lower is better)
Translates to: RVPRSLLFVFPP*WNHPQGLPRRP
Trigger: AGGTCGCCTCGGTAAACCTTGCGGATGATTCCACCACGGCGGAAAGACGAAAAGGAGGCTTCTAGGCACCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000606895.2
CDS TCA 72 bp CGACTTTTGCAACCTGCCCTCTCACACGCTGCAGCATaGTCACCTGTCTGGAGGGGGACAGTGATGTTCTCC +
Preference number: 6 (lower is better)
Translates to: RLLQPALSHAAA*SPVWRGTVMFS
Trigger: GGAGAACATCACTGTCCCCCTCCAGACAGGTGATCATGCTGCAGCGTGTGAGAGGGCAGGTTGCAAAAGTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS CCA 72 bp ATCACGTTCGGGTGCTCATCCGATTCTCGCAACAGCTaGACCTCACGGTCTGCGAAGCTAAAACACTCGGGG +
Preference number: 6 (lower is better)
Translates to: ITFGCSSDSRNS*TSRSAKLKHSG
Trigger: CCCCGAGTGTTTTAGCTTCGCAGACCGTGAGGTCCAGCTGTTGCGAGAATCGGATGAGCACCCGAACGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433197.4
ENST00000583077.1
ENST00000680433.1
ENST00000680625.1
CDS TCA 72 bp GGAGCTGCTTCTCTAGGCTCCAGAAGAACGGGTGTTTaGGCACATGCTTCGCTGAGGGGCGTTTCTGAGGAT +
Preference number: 6 (lower is better)
Translates to: GAASLGSRRTGV*AHASLRGVSED
Trigger: ATCCTCAGAAACGCCCCTCAGCGAAGCATGTGCTCAAACACCCGTTCTTCTGGAGCCTAGAGAAGCAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433197.4
ENST00000680433.1
ENST00000680625.1
CDS CAA 90 bp CCCCGGTACACAATTGTGCCCTCAGCTCCATGGCCCAGGACATCCTaGGGACAGAAGGAAATTTTCCCAACTATCACCACGCTGGTTTCC +
Preference number: 6 (lower is better)
Translates to: PRYTIVPSAPWPRTS*GQKEIFPTITTLVS
Trigger: GGAAACCAGCGTGGTGATAGTTGGGAAAATTTCCTTCTGTCCCAAGGATGTCCTGGGCCATGGAGCTGAGGGCACAATTGTGTACCGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433197.4
ENST00000680433.1
ENST00000680625.1
CDS CCA 72 bp ATTTCCCAACATACAGAGTGGGCGTCAGCTTGCTCTTaGCCTCTGTCTCCTTGGGGAACGGGTACTTCCACT +
Preference number: 6 (lower is better)
Translates to: ISQHTEWASACS*PLSPWGTGTST
Trigger: AGTGGAAGTACCCGTTCCCCAAGGAGACAGAGGCCAAGAGCAAGCTGACGCCCACTCTGTATGTTGGGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433197.4
ENST00000583896.1
ENST00000680433.1
ENST00000680625.1
CDS CCA 72 bp GAACAGCCTGGAGCGGCCATTTCCACGTTTACTTTTTaGAAAGGCGGCAGCGACTTTTGCAACCTGCCCTCT +
Preference number: 6 (lower is better)
Translates to: EQPGAAISTFTF*KGGSDFCNLPS
Trigger: AGAGGGCAGGTTGCAAAAGTCGCTGCCGCCTTTCCAAAAAGTAAACGTGGAAATGGCCGCTCCAGGCTGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS CAA 72 bp TTGAGCTTGTTCTTGCTTTTGAGTCCGGGATCAAACTaGACGTCCGTGCTGGGCGTGATCACACACTCCCCC +
Preference number: 6 (lower is better)
Translates to: LSLFLLLSPGSN*TSVLGVITHSP
Trigger: GGGGGAGTGTGTGATCACGCCCAGCACGGACGTCAAGTTTGATCCCGGACTCAAAAGCAAGAACAAGCTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433197.4
ENST00000583896.1
ENST00000680433.1
ENST00000680625.1
CDS GCA 72 bp AAAGTCCTTCTGCTCCACATACTCTTGCAGGGTGGCTaGACACAGCTCGATGGCAATGTACTGGAATTGCCG +
Preference number: 6 (lower is better)
Translates to: KVLLLHILLQGG*TQLDGNVLELP
Trigger: CGGCAATTCCAGTACATTGCCATCGAGCTGTGTGCAGCCACCCTGCAAGAGTATGTGGAGCAGAAGGACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433197.4
ENST00000680433.1
ENST00000680625.1
CDS GCA 72 bp TTACTTTTTGGAAAGGCGGCAGCGACTTTTGCAACCTaGCCTCTCACACGCTGCAGCATGATCACCTGTCTG +
Preference number: 6 (lower is better)
Translates to: LLFGKAAATFAT*PLTRCSMITCL
Trigger: CAGACAGGTGATCATGCTGCAGCGTGTGAGAGGGCAGGTTGCAAAAGTCGCTGCCGCCTTTCCAAAAAGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS GCA 72 bp TCCACGTTTACTTTTTGGAAAGGCGGCAGCGACTTTTaGAACCTGCCCTCTCACACGCTGCAGCATGATCAC +
Preference number: 6 (lower is better)
Translates to: STFTFWKGGSDF*NLPSHTLQHDH
Trigger: GTGATCATGCTGCAGCGTGTGAGAGGGCAGGTTGCAAAAGTCGCTGCCGCCTTTCCAAAAAGTAAACGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680433.1
CDS CCA 72 bp ACACAAACAACAAGGTTTCAGGAAGCGTCACTGTGCTaGTACTTCCAAAAATCCCGAGGCCGGGCAGCAGCA +
Preference number: 6 (lower is better)
Translates to: TQTTRFQEASLC*YFQKSRGRAAA
Trigger: TGCTGCTGCCCGGCCTCGGGATTTTTGGAAGTACCAGCACAGTGACGCTTCCTGAAACCTTGTTGTTTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000433197.4
ENST00000584041.1
ENST00000680433.1
ENST00000680493.1
CDS CCA 72 bp GCTTCCAAGCGTATACAGGCTGCCATCATTAGGATCTaGGAGAAAGGCAGGCTCTTCCACATGTGTTGGGAC +
Preference number: 6 (lower is better)
Translates to: ASKRIQAAIIRI*EKGRLFHMCWD
Trigger: GTCCCAACACATGTGGAAGAGCCTGCCTTTCTCCCAGATCCTAATGATGGCAGCCTGTATACGCTTGGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433197.4
ENST00000584041.1
ENST00000680433.1
ENST00000680625.1
CDS TCA 72 bp TCCACCGGAGCTCTCGGGTTTTGGTGTCGTACATGGTaGTGGTGTATTCTGTTCGCCCAAGATACAGAAGAG +
Preference number: 6 (lower is better)
Translates to: STGALGFWCRTW*WCILFAQDTEE
Trigger: CTCTTCTGTATCTTGGGCGAACAGAATACACCATCACCATGTACGACACCAAAACCCGAGAGCTCCGGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000433197.4
ENST00000577567.5
ENST00000579249.1
ENST00000680433.1
ENST00000680625.1
CDS TCA 72 bp GAGACAGGAACTCTTACCCATGTAGAGGATTCCATCTaGACTTCGGCATGGGGATGCCTGCACCAATTCTGG +
Preference number: 6 (lower is better)
Translates to: ETGTLTHVEDSI*TSAWGCLHQFW
Trigger: CCAGAATTGGTGCAGGCATCCCCATGCCGAAGTTCAGATGGAATCCTCTACATGGGTAAGAGTTCCTGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584041.1
CDS GCA 72 bp TTGACACAAACAACAAGGTTTCAGGAAGCGTCACTGTaGTGGTACTTCCAAAAATCCCGAGGCCGGGCAGCA +
Preference number: 6 (lower is better)
Translates to: LTQTTRFQEASL*WYFQKSRGRAA
Trigger: TGCTGCCCGGCCTCGGGATTTTTGGAAGTACCAGCACAGTGACGCTTCCTGAAACCTTGTTGTTTGTGTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000433197.4
ENST00000584041.1
ENST00000680433.1
ENST00000680493.1
CDS GCA 72 bp GGGCAGAGACTATCTGCAAAGGCCGATGACAAAGTCTaGTGCTTCTCTCCGGTCAGGAGGTCAATAACATAC +
Preference number: 6 (lower is better)
Translates to: GQRLSAKADDKV*CFSPVRRSITY
Trigger: GTATGTTATTGACCTCCTGACCGGAGAGAAGCAGCAGACTTTGTCATCGGCCTTTGCAGATAGTCTCTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000433197.4
ENST00000577567.5
ENST00000579249.1
ENST00000680433.1
ENST00000680625.1
CDS GCA 72 bp GCCAAAGTCGGAGATCATGGCCTTGATCTTGCCGTGTaGATTGGGCATGGATATGAGGATGTTGTGTGGCTT +
Preference number: 6 (lower is better)
Translates to: AKVGDHGLDLAV*IGHGYEDVVWL
Trigger: AAGCCACACAACATCCTCATATCCATGCCCAATGCACACGGCAAGATCAAGGCCATGATCTCCGACTTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433197.4
ENST00000680433.1
ENST00000680625.1
CDS GCA 72 bp GGGAGAAAGGCAGGCTCTTCCACATGTGTTGGGACCTaGAGGACTGGATCTGATCTTTGCTGTACAGTGTTT +
Preference number: 6 (lower is better)
Translates to: GRKAGSSTCVGT*RTGSDLCCTVF
Trigger: AAACACTGTACAGCAAAGATCAGATCCAGTCCTGCAGGTCCCAACACATGTGGAAGAGCCTGCCTTTCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680625.1
CDS CCA 72 bp GCTTCCAAGCGTATACAGGCTGCCATCATTAGGATCTaGGAGAAAGGCAGGCCAGTGCTATCCAGCTTTTAC +
Preference number: 6 (lower is better)
Translates to: ASKRIQAAIIRI*EKGRPVLSSFY
Trigger: GTAAAAGCTGGATAGCACTGGCCTGCCTTTCTCCCAGATCCTAATGATGGCAGCCTGTATACGCTTGGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577567.5
CDS CAA 72 bp ACAATTGTGCCCTCAGCTCCATGGCCCAGGACATCCTaGGGACAGAAGGAAATTTTCCCAACTATCACCACG +
Preference number: 6 (lower is better)
Translates to: TIVPSAPWPRTS*GQKEIFPTITT
Trigger: CGTGGTGATAGTTGGGAAAATTTCCTTCTGTCCCAAGGATGTCCTGGGCCATGGAGCTGAGGGCACAATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433197.4
ENST00000680433.1
ENST00000680625.1
CDS TCA 72 bp GATGTCCTGCTTTTTACCCATGTAGAGGATTCCATCTaGACTTCGGCATGGGGATGCCTGCACCAATTCTGG +
Preference number: 6 (lower is better)
Translates to: DVLLFTHVEDSI*TSAWGCLHQFW
Trigger: CCAGAATTGGTGCAGGCATCCCCATGCCGAAGTTCAGATGGAATCCTCTACATGGGTAAAAAGCAGGACATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000433197.4
ENST00000577567.5
ENST00000680433.1
ENST00000680625.1
CDS TCA 72 bp CTCCACATCCCGAGACACGGTGGTAGGTGCGTTTTCTaGAGTCTGGTCAACCAGGTTGATAACTTCCTCAAA +
Preference number: 6 (lower is better)
Translates to: LHIPRHGGRCVF*SLVNQVDNFLK
Trigger: TTTGAGGAAGTTATCAACCTGGTTGACCAGACTTCAGAAAACGCACCTACCACCGTGTCTCGGGATGTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433197.4
ENST00000680433.1
ENST00000680625.1
CDS GCA 72 bp CAGAGACTATCTGCAAAGGCCGATGACAAAGTCTGCTaGTTCTCTCCGGTCAGGAGGTCAATAACATACCAG +
Preference number: 6 (lower is better)
Translates to: QRLSAKADDKVC*FSPVRRSITYQ
Trigger: CTGGTATGTTATTGACCTCCTGACCGGAGAGAAGCAGCAGACTTTGTCATCGGCCTTTGCAGATAGTCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000433197.4
ENST00000577567.5
ENST00000579249.1
ENST00000680433.1
ENST00000680625.1
CDS CCA 72 bp TGGGACAGAAGGAAATTTTCCCAACTATCACCACGCTaGTTTCCTCATCTCCATCGTCTTGTTCCAGGGAGG +
Preference number: 6 (lower is better)
Translates to: WDRRKFSQLSPR*FPHLHRLVPGR
Trigger: CCTCCCTGGAACAAGACGATGGAGATGAGGAAACCAGCGTGGTGATAGTTGGGAAAATTTCCTTCTGTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433197.4
ENST00000680433.1
ENST00000680625.1
CDS CAA 72 bp AAGTCGGAGATCATGGCCTTGATCTTGCCGTGTGCATaGGGCATGGATATGAGGATGTTGTGTGGCTTTAGG +
Preference number: 6 (lower is better)
Translates to: KSEIMALILPCA*GMDMRMLCGFR
Trigger: CCTAAAGCCACACAACATCCTCATATCCATGCCCAATGCACACGGCAAGATCAAGGCCATGATCTCCGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433197.4
ENST00000680433.1
ENST00000680625.1
CDS TCA 72 bp CCTCTTGCTGACAGCATGCAAACTTCCATCCAGCGTTaGCACAAACAACAAGGTTTCAGGAAGCGTCACTGT +
Preference number: 6 (lower is better)
Translates to: PLADSMQTSIQR*HKQQGFRKRHC
Trigger: ACAGTGACGCTTCCTGAAACCTTGTTGTTTGTGTCAACGCTGGATGGAAGTTTGCATGCTGTCAGCAAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433197.4
ENST00000584041.1
ENST00000680433.1
ENST00000680493.1
CDS TCA 72 bp GGGTGTTTGAGCACATGCTTCGCTGAGGGGCGTTTCTaGGGATCCATCGCAATCATCTTCTCTATCAATTCA +
Preference number: 6 (lower is better)
Translates to: GCLSTCFAEGRF*GSIAIIFSINS
Trigger: TGAATTGATAGAGAAGATGATTGCGATGGATCCTCAGAAACGCCCCTCAGCGAAGCATGTGCTCAAACACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433197.4
ENST00000680433.1
ENST00000680625.1
CDS CCA 72 bp TCCCGAGACACGGTGGTAGGTGCGTTTTCTGAAGTCTaGTCAACCAGGTTGATAACTTCCTCAAAGCTCTTT +
Preference number: 6 (lower is better)
Translates to: SRDTVVGAFSEV*STRLITSSKLF
Trigger: AAAGAGCTTTGAGGAAGTTATCAACCTGGTTGACCAGACTTCAGAAAACGCACCTACCACCGTGTCTCGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433197.4
ENST00000680433.1
ENST00000680625.1
CDS CAA 72 bp GATTCACTGTCCACAGTCACCACCAGCCCATCACCATaGGACACAAAGTGGGACATCTCTGTACAGATCAAA +
Preference number: 6 (lower is better)
Translates to: DSLSTVTTSPSP*DTKWDISVQIK
Trigger: TTTGATCTGTACAGAGATGTCCCACTTTGTGTCCAATGGTGATGGGCTGGTGGTGACTGTGGACAGTGAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583896.1
CDS CAA 72 bp CCTGCAGGACTGGATCTGATCTTTGCTGTACAGTGTTaGCTCAGTCACACAGACTCGTCTTCAGATGCAGAT +
Preference number: 6 (lower is better)
Translates to: PAGLDLIFAVQC*LSHTDSSSDAD
Trigger: ATCTGCATCTGAAGACGAGTCTGTGTGACTGAGCAAACACTGTACAGCAAAGATCAGATCCAGTCCTGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680625.1
CDS CAA 90 bp TCTGAATCAGCAGGAATCACATTTTCCCGATGTTTGGGTAGATTGTaGGGAAATCTCTCCAGCATCTTGGTAGACGCAGACAGTGGGGTT +
Preference number: 6 (lower is better)
Translates to: SESAGITFSRCLGRL*GNLSSILVDADSGV
Trigger: AACCCCACTGTCTGCGTCTACCAAGATGCTGGAGAGATTTCCCAACAATCTACCCAAACATCGGGAAAATGTGATTCCTGCTGATTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433197.4
ENST00000680433.1
ENST00000680625.1
CDS CAA 90 bp TTCTCTGAATCAGCAGGAATCACATTTTCCCGATGTTTGGGTAGATaGTTGGGAAATCTCTCCAGCATCTTGGTAGACGCAGACAGTGGG +
Preference number: 6 (lower is better)
Translates to: FSESAGITFSRCLGR*LGNLSSILVDADSG
Trigger: CCCACTGTCTGCGTCTACCAAGATGCTGGAGAGATTTCCCAACAATCTACCCAAACATCGGGAAAATGTGATTCCTGCTGATTCAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433197.4
ENST00000680433.1
ENST00000680625.1
CDS GCA 72 bp GTCCATTTGATTGAGCCTGTCCTCTTGCTGACAGCATaGAAACTTCCATCCAGCGTTGACACAAACAACAAG +
Preference number: 6 (lower is better)
Translates to: VHLIEPVLLLTA*KLPSSVDTNNK
Trigger: CTTGTTGTTTGTGTCAACGCTGGATGGAAGTTTGCATGCTGTCAGCAAGAGGACAGGCTCAATCAAATGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433197.4
ENST00000584041.1
ENST00000680433.1
ENST00000680493.1
CDS GCA 72 bp GGGAGAAAGGCAGGCTCTTCCACATGTGTTGGGACCTaGAGGACTGGATCTTCTTTTAAAGTCCATTTGATT +
Preference number: 6 (lower is better)
Translates to: GRKAGSSTCVGT*RTGSSFKVHLI
Trigger: AATCAAATGGACTTTAAAAGAAGATCCAGTCCTGCAGGTCCCAACACATGTGGAAGAGCCTGCCTTTCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433197.4
ENST00000584041.1
ENST00000680433.1
CDS GCA 72 bp AGGATCCATCGCAATCATCTTCTCTATCAATTCACGTaGAATGACGTCTTCGTGCTTCTCTGGGTGCAAGCA +
Preference number: 6 (lower is better)
Translates to: RIHRNHLLYQFT*NDVFVLLWVQA
Trigger: TGCTTGCACCCAGAGAAGCACGAAGACGTCATTGCACGTGAATTGATAGAGAAGATGATTGCGATGGATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433197.4
ENST00000680433.1
ENST00000680625.1
CDS GCA 72 bp TTACTTCGGTTTCCCTTCAGACTTCACCAAGGCCCCTaGACATTGACTGTGGGAAGTATTTATGATAAGCCC +
Preference number: 6 (lower is better)
Translates to: LLRFPFRLHQGP*TLTVGSIYDKP
Trigger: GGGCTTATCATAAATACTTCCCACAGTCAATGTGCAGGGGCCTTGGTGAAGTCTGAAGGGAAACCGAAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579249.1
CDS CAA 72 bp CGGTTTCCCTTCAGACTTCACCAAGGCCCCTGCACATaGACTGTGGGAAGTATTTATGATAAGCCCATGAAA +
Preference number: 6 (lower is better)
Translates to: RFPFRLHQGPCT*TVGSIYDKPMK
Trigger: TTTCATGGGCTTATCATAAATACTTCCCACAGTCAATGTGCAGGGGCCTTGGTGAAGTCTGAAGGGAAACCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579249.1
CDS CAA 90 bp AGGACTGGATCTTCTTTTAAAGTCCATTTGATTGAGCCTGTCCTCTaGCTGACAGCATGCAAACTTCCATCCAGCGTTGACACAAACAAC +
Preference number: 6 (lower is better)
Translates to: RTGSSFKVHLIEPVL*LTACKLPSSVDTNN
Trigger: GTTGTTTGTGTCAACGCTGGATGGAAGTTTGCATGCTGTCAGCAAGAGGACAGGCTCAATCAAATGGACTTTAAAAGAAGATCCAGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433197.4
ENST00000584041.1
ENST00000680433.1
CDS TCA 72 bp TTCTACTTTCCATGGGCTTGCAGTAAATTCCTTCTGTaGCATAGAAAGACTCAACGAGGGATGTCCTCCTTC +
Preference number: 6 (lower is better)
Translates to: FYFPWACSKFLL*HRKTQRGMSSF
Trigger: GAAGGAGGACATCCCTCGTTGAGTCTTTCTATGTCACAGAAGGAATTTACTGCAAGCCCATGGAAAGTAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579249.1
CDS CCA 72 bp TCTCTGAATCAGCAGGAATCACATTTTCCCGATGTTTaGGTAGATTGTTGGGAAATCTCTCCAGCATCTTGG +
Preference number: 6 (lower is better)
Translates to: SLNQQESHFPDV*VDCWEISPASW
Trigger: CCAAGATGCTGGAGAGATTTCCCAACAATCTACCCAAACATCGGGAAAATGTGATTCCTGCTGATTCAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433197.4
ENST00000680433.1
ENST00000680625.1
CDS CAA 90 bp AAGCTCTTTTTCTCTGAATCAGCAGGAATCACATTTTCCCGATGTTaGGGTAGATTGTTGGGAAATCTCTCCAGCATCTTGGTAGACGCA +
Preference number: 6 (lower is better)
Translates to: KLFFSESAGITFSRC*GRLLGNLSSILVDA
Trigger: TGCGTCTACCAAGATGCTGGAGAGATTTCCCAACAATCTACCCAAACATCGGGAAAATGTGATTCCTGCTGATTCAGAGAAAAAGAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000433197.4
ENST00000680433.1
ENST00000680625.1
CDS CAA 72 bp ATGGTAAAAGGAAGTTTCGTCAGGCCTTCATTATTCTaGCTTCCAAGCGTATACAGGCTGCCATCATTAGGA +
Preference number: 6 (lower is better)
Translates to: MVKGSFVRPSLF*LPSVYRLPSLG
Trigger: TCCTAATGATGGCAGCCTGTATACGCTTGGAAGCAAGAATAATGAAGGCCTGACGAAACTTCCTTTTACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000433197.4
ENST00000577567.5
ENST00000584041.1
ENST00000680433.1
ENST00000680625.1
CDS CAA 72 bp TTCTCTGAATCAGCAGGAATCACATTTTCCCGATGTTaGGGTAGATTGTTGGGAAATCTCTCCAGCATCTTG +
Preference number: 6 (lower is better)
Translates to: FSESAGITFSRC*GRLLGNLSSIL
Trigger: CAAGATGCTGGAGAGATTTCCCAACAATCTACCCAAACATCGGGAAAATGTGATTCCTGCTGATTCAGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433197.4
ENST00000680433.1
ENST00000680625.1
CDS CAA 90 bp TCCAAATTACCTTCTTTTAAAGTCCATTTGATTGAGCCTGTCCTCTaGCTGACAGCATGCAAACTTCCATCCAGCGTTGACACAAACAAC +
Preference number: 6 (lower is better)
Translates to: SKLPSFKVHLIEPVL*LTACKLPSSVDTNN
Trigger: GTTGTTTGTGTCAACGCTGGATGGAAGTTTGCATGCTGTCAGCAAGAGGACAGGCTCAATCAAATGGACTTTAAAAGAAGGTAATTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680493.1