RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ERMP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000099219

Ensembl transcript IDs: ENST00000214893.9, ENST00000339450.10, ENST00000462592.5, ENST00000475005.1, ENST00000487088.5, ENST00000489219.5

Found 507 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGTGTGTAGTGGCAGTACCCACATGTGCTGAAGTGCCAAAAGACTaGCATTTTCAAGTGTCAACAGGCCATGCATCACTGCGCCACAGC +
Preference number: 1 (lower is better)
Translates to: VCVVAVPTCAEVPKD*HFQVSTGHASLRHS
Trigger: GCTGTGGCGCAGTGATGCATGGCCTGTTGACACTTGAAAATGCCAGTCTTTTGGCACTTCAGCACATGTGGGTACTGCCACTACACACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
3UTR TCA 90 bp ACAGAGAGACAAAGCACATTTGAGAGGCTGCCTGAAGAAACAGCTTaGCACAGGCTACAGCCTCAAGAGTGCAATGCTTCTCTCCCAGCC +
Preference number: 1 (lower is better)
Translates to: TERQSTFERLPEETA*HRLQPQECNASLPA
Trigger: GGCTGGGAGAGAAGCATTGCACTCTTGAGGCTGTAGCCTGTGTCAAGCTGTTTCTTCAGGCAGCCTCTCAAATGTGCTTTGTCTCTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339450.10
3UTR TCA 90 bp CAAACCAGTGACAAGAAATTGACAAACACTCCTTCTACAGCTTCCTaGGACAGCAGGCTGGCTTGTGGCCCCCTGGGTGGTAACATCTTA +
Preference number: 1 (lower is better)
Translates to: QTSDKKLTNTPSTAS*DSRLACGPLGGNIL
Trigger: TAAGATGTTACCACCCAGGGGGCCACAAGCCAGCCTGCTGTCTCAGGAAGCTGTAGAAGGAGTGTTTGTCAATTTCTTGTCACTGGTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339450.10
3UTR TCA 90 bp ATCTCTTGTCTTCCCCAGACAGATAGTGGGCAGCAATGGCCACGGTaGCCATTCCTTCAGGATGTTCTTCTGAAACCTGCACTTCTATCC +
Preference number: 1 (lower is better)
Translates to: ISCLPQTDSGQQWPR*PFLQDVLLKPALLS
Trigger: GGATAGAAGTGCAGGTTTCAGAAGAACATCCTGAAGGAATGGTCACCGTGGCCATTGCTGCCCACTATCTGTCTGGGGAAGACAAGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
3UTR CCA 90 bp CCTCATGCTGCCATTACGCAGGATCTGAACCACCTACACGTACAGTaGTCTCATTCCAGTATAAGCCACAACCTCAAGTCTCAGGAAAGC +
Preference number: 1 (lower is better)
Translates to: PHAAITQDLNHLHVQ*SHSSISHNLKSQES
Trigger: GCTTTCCTGAGACTTGAGGTTGTGGCTTATACTGGAATGAGACCACTGTACGTGTAGGTGGTTCAGATCCTGCGTAATGGCAGCATGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339450.10
3UTR TCA 90 bp GGAGTCCATGGGAGTAAAAGACAAAGTAGTCTCCTCCTTTACTTGTaGCTGGGGTGCCATTGCCAAGAGACCACTGAGAAAGTGTTGACC +
Preference number: 1 (lower is better)
Translates to: GVHGSKRQSSLLLYL*LGCHCQETTEKVLT
Trigger: GGTCAACACTTTCTCAGTGGTCTCTTGGCAATGGCACCCCAGTCACAAGTAAAGGAGGAGACTACTTTGTCTTTTACTCCCATGGACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487088.5
3UTR CCA 90 bp CACAGGCTACAGCCTCAAGAGTGCAATGCTTCTCTCCCAGCCCTATaGCAATCACTTTCCAGTGACCTACACAGAGTTATATTCTCAAGG +
Preference number: 1 (lower is better)
Translates to: HRLQPQECNASLPAL*QSLSSDLHRVIFSR
Trigger: CCTTGAGAATATAACTCTGTGTAGGTCACTGGAAAGTGATTGCCATAGGGCTGGGAGAGAAGCATTGCACTCTTGAGGCTGTAGCCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339450.10
3UTR TCA 90 bp AGAGTGCAATGCTTCTCTCCCAGCCCTATGGCAATCACTTTCCAGTaGCCTACACAGAGTTATATTCTCAAGGGGAATCATTACCTCAGT +
Preference number: 1 (lower is better)
Translates to: RVQCFSPSPMAITFQ*PTQSYILKGNHYLS
Trigger: ACTGAGGTAATGATTCCCCTTGAGAATATAACTCTGTGTAGGTCACTGGAAAGTGATTGCCATAGGGCTGGGAGAGAAGCATTGCACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339450.10
3UTR TCA 90 bp ATTTCTACAAAGTCCAGGAAGAGCAATGATTCCAGTGTGCAGTGCTaGTGCATGTGTGAGCCTAACATGTTATTCAGCTCTGGTTGCAGC +
Preference number: 1 (lower is better)
Translates to: ISTKSRKSNDSSVQC*CMCEPNMLFSSGCS
Trigger: GCTGCAACCAGAGCTGAATAACATGTTAGGCTCACACATGCATCAGCACTGCACACTGGAATCATTGCTCTTCCTGGACTTTGTAGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339450.10
3UTR GCA 90 bp ACAAGCAGCTTCAAGGACGTTTTCTCCGGCAATGCATACTTACTGTaGTCTTTCTATTCAGACAGATCCACAGACCACCTTTCAAGAGCA +
Preference number: 1 (lower is better)
Translates to: TSSFKDVFSGNAYLL*SFYSDRSTDHLSRA
Trigger: TGCTCTTGAAAGGTGGTCTGTGGATCTGTCTGAATAGAAAGAGCACAGTAAGTATGCATTGCCGGAGAAAACGTCCTTGAAGCTGCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339450.10
3UTR GCA 90 bp GATCAGAAAGTGCACTGGAAGATACCAAGGAAAACCACAAAGAGGTaGATTCTCCTCACAGTGAGCTCGGATACTATCATTGATCTCAGG +
Preference number: 1 (lower is better)
Translates to: DQKVHWKIPRKTTKR*ILLTVSSDTIIDLR
Trigger: CCTGAGATCAATGATAGTATCCGAGCTCACTGTGAGGAGAATGCACCTCTTTGTGGTTTTCCTTGGTATCTTCCAGTGCACTTTCTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487088.5
3UTR GCA 90 bp TCACCAATGCCCTCACTGCTGGAACCAAAAAGCCATGAGAGGTACTaGTGTGATACACCTTACAAGCTACATAGCCATCTTCAAAATGAA +
Preference number: 1 (lower is better)
Translates to: SPMPSLLEPKSHERY*CDTPYKLHSHLQNE
Trigger: TTCATTTTGAAGATGGCTATGTAGCTTGTAAGGTGTATCACAGCAGTACCTCTCATGGCTTTTTGGTTCCAGCAGTGAGGGCATTGGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339450.10
3UTR CCA 90 bp CAACATGCTACCCTTCTATTCAACACAGCACTAGAACAAGGCAAGTaGGACCTTTGTCGACACATGATTCGATTTCTTAAAGCCATTGGC +
Preference number: 1 (lower is better)
Translates to: QHATLLFNTALEQGK*DLCRHMIRFLKAIG
Trigger: GCCAATGGCTTTAAGAAATCGAATCATGTGTCGACAAAGGTCCCACTTGCCTTGTTCTAGTGCTGTGTTGAATAGAAGGGTAGCATGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462592.5
3UTR GCA 90 bp TACTTAGAGCTCATCCACAAGATTAAAATACAAAGAGATCGTAGGTaGACACCCAGGCAGAGGGAAATGTCCAATCTGGGAACTTTTCCT +
Preference number: 1 (lower is better)
Translates to: YLELIHKIKIQRDRR*TPRQREMSNLGTFP
Trigger: AGGAAAAGTTCCCAGATTGGACATTTCCCTCTGCCTGGGTGTGCACCTACGATCTCTTTGTATTTTAATCTTGTGGATGAGCTCTAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
3UTR TCA 90 bp CACAAAGAGGTGCATTCTCCTCACAGTGAGCTCGGATACTATCATTaGTCTCAGGAATGTGAGGGGTTATGTGAGAAATTCCAGTATAAT +
Preference number: 1 (lower is better)
Translates to: HKEVHSPHSELGYYH*SQECEGLCEKFQYN
Trigger: ATTATACTGGAATTTCTCACATAACCCCTCACATTCCTGAGATCAATGATAGTATCCGAGCTCACTGTGAGGAGAATGCACCTCTTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487088.5
3UTR TCA 90 bp AACATTGTAAGGCAACAATTAATCCTCAGTAAGTCAGCAAACCAGTaGCAAGAAATTGACAAACACTCCTTCTACAGCTTCCTGAGACAG +
Preference number: 1 (lower is better)
Translates to: NIVRQQLILSKSANQ*QEIDKHSFYSFLRQ
Trigger: CTGTCTCAGGAAGCTGTAGAAGGAGTGTTTGTCAATTTCTTGTCACTGGTTTGCTGACTTACTGAGGATTAATTGTTGCCTTACAATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339450.10
3UTR GCA 90 bp CACAACTGTGATTCTATACAAAATATAAACCCTGCAAACCTTATGTaGTACCTGACAGATAAAAGTAGCAGGAGCCAGACTCTTGAAGCA +
Preference number: 1 (lower is better)
Translates to: HNCDSIQNINPANLM*YLTDKSSRSQTLEA
Trigger: TGCTTCAAGAGTCTGGCTCCTGCTACTTTTATCTGTCAGGTAGCACATAAGGTTTGCAGGGTTTATATTTTGTATAGAATCACAGTTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339450.10
3UTR GCA 90 bp AGTATAATCAAACCCATTGATCCATATTCCAGAGTCCCGTTTAACTaGATTTCCTTCCAAGTCATGGAATGTTCTAGTCATATGCTGAAG +
Preference number: 1 (lower is better)
Translates to: SIIKPIDPYSRVPFN*ISFQVMECSSHMLK
Trigger: CTTCAGCATATGACTAGAACATTCCATGACTTGGAAGGAAATGCAGTTAAACGGGACTCTGGAATATGGATCAATGGGTTTGATTATACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487088.5
3UTR TCA 90 bp GTGACCTACACAGAGTTATATTCTCAAGGGGAATCATTACCTCAGTaGATGATATTTTACCCACCATCCACTAATACAACAAATGGTTTT +
Preference number: 1 (lower is better)
Translates to: VTYTELYSQGESLPQ*MIFYPPSTNTTNGF
Trigger: AAAACCATTTGTTGTATTAGTGGATGGTGGGTAAAATATCATTCACTGAGGTAATGATTCCCCTTGAGAATATAACTCTGTGTAGGTCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
3UTR-3UTR TCA 90 bp AAACACTCCTTCTACAGCTTCCTGAGACAGCAGGCTGGCTTGTGGCCCCCTGGGGTCCAGGAAGAGCAATaGTTCCAGTGTGCAGTGCTG +
Preference number: 2 (lower is better)
Translates to: KHSFYSFLRQQAGLWPPGVQEEQ*FQCAVL
Trigger: CAGCACTGCACACTGGAATCATTGCTCTTCCTGGAC...CCCAGGGGGCCACAAGCCAGCCTGCTGTCTCAGGAAGCTGTAGAAGGAGTGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339450.10
3UTR CAA 90 bp GCTCAGCACAGGGTCCAGGCCTCAGCACAGAGAGACAAAGCACATTaGAGAGGCTGCCTGAAGAAACAGCTTGACACAGGCTACAGCCTC +
Preference number: 2 (lower is better)
Translates to: AQHRVQASAQRDKAH*RGCLKKQLDTGYSL
Trigger: GAGGCTGTAGCCTGTGTCAAGCTGTTTCTTCAGGCAGCCTCTCAAATGTGCTTTGTCTCTCTGTGCTGAGGCCTGGACCCTGTGCTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339450.10
3UTR-3UTR GCA 90 bp AAACACTCCTTCTACAGCTTCCTGAGACAGCAGGCTGGCTTGTGGCCCCCTGGGAAAGCAGCACAGCAGTaGATCTGTGTGTCCACTTGT +
Preference number: 2 (lower is better)
Translates to: KHSFYSFLRQQAGLWPPGKAAQQ*ICVSTC
Trigger: ACAAGTGGACACACAGATGCACTGCTGTGCTGCTTT...CCCAGGGGGCCACAAGCCAGCCTGCTGTCTCAGGAAGCTGTAGAAGGAGTGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339450.10
3UTR-3UTR GCA 90 bp ACACTCCTTCTACAGCTTCCTGAGACAGCAGGCTGGCTTGTGGCCCCCTGGGTGAGCCATGAGAGGTACTaGTGTGATACACCTTACAAG +
Preference number: 2 (lower is better)
Translates to: TLLLQLPETAGWLVAPWVSHERY*CDTPYK
Trigger: CTTGTAAGGTGTATCACAGCAGTACCTCTCATGGCT...CACCCAGGGGGCCACAAGCCAGCCTGCTGTCTCAGGAAGCTGTAGAAGGAGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339450.10
3UTR-3UTR CCA 90 bp AAACACTCCTTCTACAGCTTCCTGAGACAGCAGGCTGGCTTGTGGCCCCCTGGGCAATGCCCTCACTGCTaGAACCAAAAAGCCATGAGA +
Preference number: 2 (lower is better)
Translates to: KHSFYSFLRQQAGLWPPGQCPHC*NQKAMR
Trigger: TCTCATGGCTTTTTGGTTCCAGCAGTGAGGGCATTG...CCCAGGGGGCCACAAGCCAGCCTGCTGTCTCAGGAAGCTGTAGAAGGAGTGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000339450.10
3UTR-3UTR TCA 90 bp ACACTCCTTCTACAGCTTCCTGAGACAGCAGGCTGGCTTGTGGCCCCCTGGGTGACCTTATGTGCTACCTaGCAGATAAAAGTAGCAGGA +
Preference number: 2 (lower is better)
Translates to: TLLLQLPETAGWLVAPWVTLCAT*QIKVAG
Trigger: TCCTGCTACTTTTATCTGTCAGGTAGCACATAAGGT...CACCCAGGGGGCCACAAGCCAGCCTGCTGTCTCAGGAAGCTGTAGAAGGAGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339450.10
3UTR-3UTR CCA 90 bp AAACACTCCTTCTACAGCTTCCTGAGACAGCAGGCTGGCTTGTGGCCCCCTGGGCACCTACACGTACAGTaGTCTCATTCCAGTATAAGC +
Preference number: 2 (lower is better)
Translates to: KHSFYSFLRQQAGLWPPGHLHVQ*SHSSIS
Trigger: GCTTATACTGGAATGAGACCACTGTACGTGTAGGTG...CCCAGGGGGCCACAAGCCAGCCTGCTGTCTCAGGAAGCTGTAGAAGGAGTGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339450.10
3UTR-3UTR TCA 90 bp ACACTCCTTCTACAGCTTCCTGAGACAGCAGGCTGGCTTGTGGCCCCCTGGGTGGCAATCACTTTCCAGTaGCCTACACAGAGTTATATT +
Preference number: 2 (lower is better)
Translates to: TLLLQLPETAGWLVAPWVAITFQ*PTQSYI
Trigger: AATATAACTCTGTGTAGGTCACTGGAAAGTGATTGC...CACCCAGGGGGCCACAAGCCAGCCTGCTGTCTCAGGAAGCTGTAGAAGGAGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339450.10
3UTR-3UTR TCA 90 bp TGCCATTACGCAGGATCTGAACCACCTACACGTACAGTGGTCTCATTCCAGTATCACTTGTCAGGACAGTaGGTCACCAGCTCAGCACAG +
Preference number: 2 (lower is better)
Translates to: CHYAGSEPPTRTVVSFQYHLSGQ*VTSSAQ
Trigger: CTGTGCTGAGCTGGTGACTCACTGTCCTGACAAGTG...ATACTGGAATGAGACCACTGTACGTGTAGGTGGTTCAGATCCTGCGTAATGGCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339450.10
3UTR-3UTR TCA 90 bp GTCTTCCCCAGACAGATAGTGGGCAGCAATGGCCACGGTGACCATTCCTTCAGGGATACCAGTTTTTCCTaGTCAGAAAGTGCACTGGAA +
Preference number: 2 (lower is better)
Translates to: VFPRQIVGSNGHGDHSFRDTSFS*SESALE
Trigger: TTCCAGTGCACTTTCTGATCAGGAAAAACTGGTATC...CCTGAAGGAATGGTCACCGTGGCCATTGCTGCCCACTATCTGTCTGGGGAAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487088.5
3UTR-3UTR GCA 90 bp TCAAGTGTCAACAGGCCATGCATCACTGCGCCACAGCTAAACCCTTATAGTGCTAGTGTCAACAGGCCATaGATCACTGCGCCACAGCTA +
Preference number: 2 (lower is better)
Translates to: SSVNRPCITAPQLNPYSASVNRP*ITAPQL
Trigger: TAGCTGTGGCGCAGTGATGCATGGCCTGTTGACACT...AGCACTATAAGGGTTTAGCTGTGGCGCAGTGATGCATGGCCTGTTGACACTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
3UTR-3UTR GCA 90 bp TGCCATTACGCAGGATCTGAACCACCTACACGTACAGTGGTCTCATTCCAGTATAGTGTCAACAGGCCATaGATCACTGCGCCACAGCTA +
Preference number: 2 (lower is better)
Translates to: CHYAGSEPPTRTVVSFQYSVNRP*ITAPQL
Trigger: TAGCTGTGGCGCAGTGATGCATGGCCTGTTGACACT...ATACTGGAATGAGACCACTGTACGTGTAGGTGGTTCAGATCCTGCGTAATGGCA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339450.10
3UTR-3UTR TCA 90 bp CCATTGGCTCTGGAGAATCTGAGACACCTCCATCCACACCCACAGCTCAGGTTATTCAAGTGGTGGATTTaGGTTCTTCAGGAATCGAAG +
Preference number: 2 (lower is better)
Translates to: PLALENLRHLHPHPQLRLFKWWI*VLQESK
Trigger: CTTCGATTCCTGAAGAACTCAAATCCACCACTTGAA...TAACCTGAGCTGTGGGTGTGGATGGAGGTGTCTCAGATTCTCCAGAGCCAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462592.5
3UTR-3UTR TCA 90 bp TTGACCCTTTGTGGGCTCGAACATAGAAGGACATATGGCTTGGTCCTGTTGCTTCTCGGATACTATCATTaGTCTCAGGAATGTGAGGGG +
Preference number: 2 (lower is better)
Translates to: LTLCGLEHRRTYGLVLLLLGYYH*SQECEG
Trigger: CCCCTCACATTCCTGAGATCAATGATAGTATCCGAG...AAGCAACAGGACCAAGCCATATGTCCTTCTATGTTCGAGCCCACAAAGGGTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487088.5
3UTR-3UTR TCA 90 bp CCCTTTGTGGGCTCGAACATAGAAGGACATATGGCTTGGTCCTGTTGCTTCAAAGCATTCTCCTCACAGTaGGCTCGGATACTATCATTG +
Preference number: 2 (lower is better)
Translates to: PFVGSNIEGHMAWSCCFKAFSSQ*ARILSL
Trigger: CAATGATAGTATCCGAGCTCACTGTGAGGAGAATGC...TTTGAAGCAACAGGACCAAGCCATATGTCCTTCTATGTTCGAGCCCACAAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487088.5
3UTR-3UTR GCA 90 bp GTCTTCCCCAGACAGATAGTGGGCAGCAATGGCCACGGTGACCATTCCTTCAGGATGGCTTGGTCCTGTTaGTTCAAAAGTCAATTTTAT +
Preference number: 2 (lower is better)
Translates to: VFPRQIVGSNGHGDHSFRMAWSC*FKSQFY
Trigger: ATAAAATTGACTTTTGAAGCAACAGGACCAAGCCAT...CCTGAAGGAATGGTCACCGTGGCCATTGCTGCCCACTATCTGTCTGGGGAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000487088.5
3UTR-3UTR TCA 90 bp TGCCATTACGCAGGATCTGAACCACCTACACGTACAGTGGTCTCATTCCAGTATTATAGTGCTTGGCCCTaGAAAGCGTTAACCCAGAAA +
Preference number: 2 (lower is better)
Translates to: CHYAGSEPPTRTVVSFQYYSAWP*KALTQK
Trigger: TTTCTGGGTTAACGCTTTTCAGGGCCAAGCACTATA...ATACTGGAATGAGACCACTGTACGTGTAGGTGGTTCAGATCCTGCGTAATGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339450.10
3UTR-3UTR GCA 90 bp AAATGTCCAATCTGGGAACTTTTCCTTCAGAGCATCCAGTTGAGGGGATCTCTTACTTCTATCCAGAACTaGCATGCAGAGGCCTGGAGT +
Preference number: 2 (lower is better)
Translates to: KCPIWELFLQSIQLRGSLTSIQN*HAEAWS
Trigger: ACTCCAGGCCTCTGCATGGCAGTTCTGGATAGAAGT...AAGAGATCCCCTCAACTGGATGCTCTGAAGGAAAAGTTCCCAGATTGGACATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
3UTR-3UTR CCA 90 bp GCACACCCAGGCAGAGGGAAATGTCCAATCTGGGAACTTTTCCTTCAGAGCATCAAGAAACACTCTCTTTaGCTTCGGATTAGCAGGATT +
Preference number: 2 (lower is better)
Translates to: AHPGRGKCPIWELFLQSIKKHSL*LRISRI
Trigger: AATCCTGCTAATCCGAAGCCAAAGAGAGTGTTTCTT...GATGCTCTGAAGGAAAAGTTCCCAGATTGGACATTTCCCTCTGCCTGGGTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487088.5
3UTR CAA 90 bp CTGCATATGGTGTGTAATCCTAGGAACCCAGTTCAAGTGGTGGATTaGAGTTCTTCAGGAATCGAAGCATCAGTTTATCCCAGTCAGCTG +
Preference number: 2 (lower is better)
Translates to: LHMVCNPRNPVQVVD*SSSGIEASVYPSQL
Trigger: CAGCTGACTGGGATAAACTGATGCTTCGATTCCTGAAGAACTCAAATCCACCACTTGAACTGGGTTCCTAGGATTACACACCATATGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462592.5
3UTR-3UTR TCA 90 bp TTGACCCTTTGTGGGCTCGAACATAGAAGGACATATGGCTTGGTCCTGTTGCTTTCTGTTCTTTGGATATaGGTCGGAAATGAGGAGGAT +
Preference number: 2 (lower is better)
Translates to: LTLCGLEHRRTYGLVLLLSVLWI*VGNEED
Trigger: ATCCTCCTCATTTCCGACTCATATCCAAAGAACAGA...AAGCAACAGGACCAAGCCATATGTCCTTCTATGTTCGAGCCCACAAAGGGTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487088.5
3UTR-3UTR GCA 90 bp TCCAGTGACCTACACAGAGTTATATTCTCAAGGGGAATCATTACCTCAGTGAATGCCTCAAGAGTGCAATaGTTCTCTCCCAGCCCTATG +
Preference number: 2 (lower is better)
Translates to: SSDLHRVIFSRGIITSVNASRVQ*FSPSPM
Trigger: CATAGGGCTGGGAGAGAAGCATTGCACTCTTGAGGC...ATTCACTGAGGTAATGATTCCCCTTGAGAATATAACTCTGTGTAGGTCACTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339450.10
3UTR-3UTR GCA 90 bp TCCAGTGACCTACACAGAGTTATATTCTCAAGGGGAATCATTACCTCAGTGAATCTACAGCCTCAAGAGTaGAATGCTTCTCTCCCAGCC +
Preference number: 2 (lower is better)
Translates to: SSDLHRVIFSRGIITSVNLQPQE*NASLPA
Trigger: GGCTGGGAGAGAAGCATTGCACTCTTGAGGCTGTAG...ATTCACTGAGGTAATGATTCCCCTTGAGAATATAACTCTGTGTAGGTCACTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339450.10
3UTR-3UTR CCA 90 bp CTGCTGGAACCAAAAAGCCATGAGAGGTACTGCTGTGATACACCTTACAAGCTAAGAAACCATGTCACATaGAGTATCCACTGGGCATGT +
Preference number: 2 (lower is better)
Translates to: LLEPKSHERYCCDTPYKLRNHVT*SIHWAC
Trigger: ACATGCCCAGTGGATACTCCATGTGACATGGTTTCT...TAGCTTGTAAGGTGTATCACAGCAGTACCTCTCATGGCTTTTTGGTTCCAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339450.10
3UTR-3UTR CCA 90 bp CAGCCCTATGGCAATCACTTTCCAGTGACCTACACAGAGTTATATTCTCAAGGGGGGCAGCTATTGAAGTaGATTGTTGGCTTTGTCCTT +
Preference number: 2 (lower is better)
Translates to: QPYGNHFPVTYTELYSQGGQLLK*IVGFVL
Trigger: AAGGACAAAGCCAACAATCCACTTCAATAGCTGCCC...CCCTTGAGAATATAACTCTGTGTAGGTCACTGGAAAGTGATTGCCATAGGGCTG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
3UTR-3UTR TCA 90 bp TCCAGTGACCTACACAGAGTTATATTCTCAAGGGGAATCATTACCTCAGTGAATAGTACCCACATGTGCTaGAGTGCCAAAAGACTGGCA +
Preference number: 2 (lower is better)
Translates to: SSDLHRVIFSRGIITSVNSTHMC*SAKRLA
Trigger: TGCCAGTCTTTTGGCACTTCAGCACATGTGGGTACT...ATTCACTGAGGTAATGATTCCCCTTGAGAATATAACTCTGTGTAGGTCACTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
3UTR-3UTR TCA 90 bp CCACTGGGCATGTACTTAGAGCTCATCCACAAGATTAAAATACAAAGAGATCGTAGTACCCACATGTGCTaGAGTGCCAAAAGACTGGCA +
Preference number: 2 (lower is better)
Translates to: PLGMYLELIHKIKIQRDRSTHMC*SAKRLA
Trigger: TGCCAGTCTTTTGGCACTTCAGCACATGTGGGTACT...ACGATCTCTTTGTATTTTAATCTTGTGGATGAGCTCTAAGTACATGCCCAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489219.5
3UTR-3UTR TCA 90 bp TCCAGTGACCTACACAGAGTTATATTCTCAAGGGGAATCATTACCTCAGTGAATCCTGAAGAAACAGCTTaGCACAGGCTACAGCCTCAA +
Preference number: 2 (lower is better)
Translates to: SSDLHRVIFSRGIITSVNPEETA*HRLQPQ
Trigger: TTGAGGCTGTAGCCTGTGTCAAGCTGTTTCTTCAGG...ATTCACTGAGGTAATGATTCCCCTTGAGAATATAACTCTGTGTAGGTCACTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339450.10
3UTR-3UTR TCA 90 bp GAGACCACTGAGAAAGTGTTGACCCTTTGTGGGCTCGAACATAGAAGGACATATGTTCTAGTCATATGCTaGAGAAACACTCTCTTTGGC +
Preference number: 2 (lower is better)
Translates to: ETTEKVLTLCGLEHRRTYVLVIC*RNTLFG
Trigger: GCCAAAGAGAGTGTTTCTTCAGCATATGACTAGAAC...ATATGTCCTTCTATGTTCGAGCCCACAAAGGGTCAACACTTTCTCAGTGGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487088.5
3UTR-3UTR TCA 90 bp CAGCCCTATGGCAATCACTTTCCAGTGACCTACACAGAGTTATATTCTCAAGGGTTCAGGATGTTCTTCTaGAACCTGCACTTCTATCCA +
Preference number: 2 (lower is better)
Translates to: QPYGNHFPVTYTELYSQGFRMFF*NLHFYP
Trigger: TGGATAGAAGTGCAGGTTTCAGAAGAACATCCTGAA...CCCTTGAGAATATAACTCTGTGTAGGTCACTGGAAAGTGATTGCCATAGGGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489219.5
3UTR-3UTR CCA 90 bp TCTCTAATGGTACTGCATATGGTGTGTAATCCTAGGAACCCAGTTCAAGTGGTGAGAAACCATGTCACATaGAGTATCCACTGGGCATGT +
Preference number: 2 (lower is better)
Translates to: SLMVLHMVCNPRNPVQVVRNHVT*SIHWAC
Trigger: ACATGCCCAGTGGATACTCCATGTGACATGGTTTCT...CACCACTTGAACTGGGTTCCTAGGATTACACACCATATGCAGTACCATTAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462592.5
3UTR-3UTR CCA 90 bp AAGGAAAACCACAAAGAGGTGCATTCTCCTCACAGTGAGCTCGGATACTATCATAGAAACCATGTCACATaGAGTATCCACTGGGCATGT +
Preference number: 2 (lower is better)
Translates to: KENHKEVHSPHSELGYYHRNHVT*SIHWAC
Trigger: ACATGCCCAGTGGATACTCCATGTGACATGGTTTCT...ATGATAGTATCCGAGCTCACTGTGAGGAGAATGCACCTCTTTGTGGTTTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487088.5
3UTR-3UTR TCA 90 bp CAGCCCTATGGCAATCACTTTCCAGTGACCTACACAGAGTTATATTCTCAAGGGGCAATCACTTTCCAGTaGCCTACACAGAGTTATATT +
Preference number: 2 (lower is better)
Translates to: QPYGNHFPVTYTELYSQGAITFQ*PTQSYI
Trigger: AATATAACTCTGTGTAGGTCACTGGAAAGTGATTGC...CCCTTGAGAATATAACTCTGTGTAGGTCACTGGAAAGTGATTGCCATAGGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
3UTR-3UTR GCA 90 bp CTGGCTGGAAAACAAAAAGATAGGCCCAGTGCATCAGTAAGATTATACCATGAAGCACATTTGAGAGGCTaGCTGAAGAAACAGCTTGAC +
Preference number: 2 (lower is better)
Translates to: LAGKQKDRPSASVRLYHEAHLRG*LKKQLD
Trigger: GTCAAGCTGTTTCTTCAGGCAGCCTCTCAAATGTGC...TTCATGGTATAATCTTACTGATGCACTGGGCCTATCTTTTTGTTTTCCAGCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339450.10
3UTR-3UTR GCA 90 bp AAATGTCCAATCTGGGAACTTTTCCTTCAGAGCATCCAGTTGAGGGGATCTCTTTGTTCTTCTGAAACCTaGACTTCTATCCAGAACTGC +
Preference number: 2 (lower is better)
Translates to: KCPIWELFLQSIQLRGSLCSSET*TSIQNC
Trigger: GCAGTTCTGGATAGAAGTGCAGGTTTCAGAAGAACA...AAGAGATCCCCTCAACTGGATGCTCTGAAGGAAAAGTTCCCAGATTGGACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
3UTR-3UTR CCA 90 bp TCCAGTGACCTACACAGAGTTATATTCTCAAGGGGAATCATTACCTCAGTGAATAGAAACCATGTCACATaGAGTATCCACTGGGCATGT +
Preference number: 2 (lower is better)
Translates to: SSDLHRVIFSRGIITSVNRNHVT*SIHWAC
Trigger: ACATGCCCAGTGGATACTCCATGTGACATGGTTTCT...ATTCACTGAGGTAATGATTCCCCTTGAGAATATAACTCTGTGTAGGTCACTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
3UTR-3UTR TCA 90 bp AAATGTCCAATCTGGGAACTTTTCCTTCAGAGCATCCAGTTGAGGGGATCTCTTTCATTAACAATGCTCTaGCAGTGTACATCTTTCTTG +
Preference number: 2 (lower is better)
Translates to: KCPIWELFLQSIQLRGSLSLTML*QCTSFL
Trigger: CAAGAAAGATGTACACTGTCAGAGCATTGTTAATGA...AAGAGATCCCCTCAACTGGATGCTCTGAAGGAAAAGTTCCCAGATTGGACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489219.5
3UTR-3UTR TCA 90 bp TCCAGTGACCTACACAGAGTTATATTCTCAAGGGGAATCATTACCTCAGTGAATCATTACCTCAGTGAATaGTATTTTACCCACCATCCA +
Preference number: 2 (lower is better)
Translates to: SSDLHRVIFSRGIITSVNHYLSE*YFTHHP
Trigger: TGGATGGTGGGTAAAATATCATTCACTGAGGTAATG...ATTCACTGAGGTAATGATTCCCCTTGAGAATATAACTCTGTGTAGGTCACTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
3UTR-3UTR CCA 90 bp CTGGCTGGAAAACAAAAAGATAGGCCCAGTGCATCAGTAAGATTATACCATGAAGAAGTGCCAAAAGACTaGCATTTTCAAGTGTCAACA +
Preference number: 2 (lower is better)
Translates to: LAGKQKDRPSASVRLYHEEVPKD*HFQVST
Trigger: TGTTGACACTTGAAAATGCCAGTCTTTTGGCACTTC...TTCATGGTATAATCTTACTGATGCACTGGGCCTATCTTTTTGTTTTCCAGCCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000339450.10
3UTR-3UTR TCA 90 bp TCCAGTGACCTACACAGAGTTATATTCTCAAGGGGAATCATTACCTCAGTGAATGAATCATTACCTCAGTaGATGATATTTTACCCACCA +
Preference number: 2 (lower is better)
Translates to: SSDLHRVIFSRGIITSVNESLPQ*MIFYPP
Trigger: TGGTGGGTAAAATATCATTCACTGAGGTAATGATTC...ATTCACTGAGGTAATGATTCCCCTTGAGAATATAACTCTGTGTAGGTCACTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
3UTR CAA 90 bp TTCATGCGACAATCATTCTTAGGTCAAACACAAGAACGAACTATTTaGAAATCAATTCCTCACACTTTTTCCCTGAATATGCAGTACTGT +
Preference number: 2 (lower is better)
Translates to: FMRQSFLGQTQERTI*KSIPHTFSLNMQYC
Trigger: ACAGTACTGCATATTCAGGGAAAAAGTGTGAGGAATTGATTTCAAAATAGTTCGTTCTTGTGTTTGACCTAAGAATGATTGTCGCATGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339450.10
3UTR-3UTR CAA 90 bp AAACACTCCTTCTACAGCTTCCTGAGACAGCAGGCTGGCTTGTGGCCCCCTGGGGCAGGAGCCAGACTCTaGAAGCACTTGAGACTGATT +
Preference number: 3 (lower is better)
Translates to: KHSFYSFLRQQAGLWPPGAGARL*KHLRLI
Trigger: AATCAGTCTCAAGTGCTTCAAGAGTCTGGCTCCTGC...CCCAGGGGGCCACAAGCCAGCCTGCTGTCTCAGGAAGCTGTAGAAGGAGTGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339450.10
3UTR-3UTR CAA 90 bp AAACACTCCTTCTACAGCTTCCTGAGACAGCAGGCTGGCTTGTGGCCCCCTGGGCAGTGTACATCTTTCTaGATCCTAAAGGGGCAGCTA +
Preference number: 3 (lower is better)
Translates to: KHSFYSFLRQQAGLWPPGQCTSF*ILKGQL
Trigger: TAGCTGCCCCTTTAGGATCAAGAAAGATGTACACTG...CCCAGGGGGCCACAAGCCAGCCTGCTGTCTCAGGAAGCTGTAGAAGGAGTGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339450.10
3UTR-3UTR CAA 90 bp AAACACTCCTTCTACAGCTTCCTGAGACAGCAGGCTGGCTTGTGGCCCCCTGGGAGAGACAAAGCACATTaGAGAGGCTGCCTGAAGAAA +
Preference number: 3 (lower is better)
Translates to: KHSFYSFLRQQAGLWPPGRDKAH*RGCLKK
Trigger: TTTCTTCAGGCAGCCTCTCAAATGTGCTTTGTCTCT...CCCAGGGGGCCACAAGCCAGCCTGCTGTCTCAGGAAGCTGTAGAAGGAGTGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339450.10
3UTR TCA 72 bp CTTCCCCAGACAGATAGTGGGCAGCAATGGCCACGGTaGCCATTCCTTCAGGATGTTCTTCTGAAACCTGCA +
Preference number: 3 (lower is better)
Translates to: LPQTDSGQQWPR*PFLQDVLLKPA
Trigger: TGCAGGTTTCAGAAGAACATCCTGAAGGAATGGTCACCGTGGCCATTGCTGCCCACTATCTGTCTGGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
3UTR GCA 72 bp AACAGCTTGACACAGGCTACAGCCTCAAGAGTGCAATaGTTCTCTCCCAGCCCTATGGCAATCACTTTCCAG +
Preference number: 3 (lower is better)
Translates to: NSLTQATASRVQ*FSPSPMAITFQ
Trigger: CTGGAAAGTGATTGCCATAGGGCTGGGAGAGAAGCATTGCACTCTTGAGGCTGTAGCCTGTGTCAAGCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339450.10
3UTR-3UTR CAA 90 bp TGGGCCCAGTTAGTTTTTAGGGAGTCACAGATTAGGCAGGCAACGAGGGGCATGTTGCACAGTTTACCATaGATCTCACCAATGCCCTCA +
Preference number: 3 (lower is better)
Translates to: WAQLVFRESQIRQATRGMLHSLP*ISPMPS
Trigger: TGAGGGCATTGGTGAGATCAATGGTAAACTGTGCAA...CATGCCCCTCGTTGCCTGCCTAATCTGTGACTCCCTAAAAACTAACTGGGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339450.10
3UTR-3UTR CAA 90 bp GAACTGCCATGCAGAGGCCTGGAGTCCATGGGAGTAAAAGACAAAGTAGTCTCCAATGAGGAGGATTTCTaGGAGAAACTTCTGGGGCAG +
Preference number: 3 (lower is better)
Translates to: ELPCRGLESMGVKDKVVSNEEDF*EKLLGQ
Trigger: CTGCCCCAGAAGTTTCTCCAAGAAATCCTCCTCATT...GGAGACTACTTTGTCTTTTACTCCCATGGACTCCAGGCCTCTGCATGGCAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487088.5
3UTR TCA 72 bp CAAAGCACATTTGAGAGGCTGCCTGAAGAAACAGCTTaGCACAGGCTACAGCCTCAAGAGTGCAATGCTTCT +
Preference number: 3 (lower is better)
Translates to: QSTFERLPEETA*HRLQPQECNAS
Trigger: AGAAGCATTGCACTCTTGAGGCTGTAGCCTGTGTCAAGCTGTTTCTTCAGGCAGCCTCTCAAATGTGCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339450.10
3UTR GCA 72 bp GCCAAAAGACTGGCATTTTCAAGTGTCAACAGGCCATaGATCACTGCGCCACAGCTAAACCCTTATAGTGCT +
Preference number: 3 (lower is better)
Translates to: AKRLAFSSVNRP*ITAPQLNPYSA
Trigger: AGCACTATAAGGGTTTAGCTGTGGCGCAGTGATGCATGGCCTGTTGACACTTGAAAATGCCAGTCTTTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
3UTR CCA 72 bp GCCATTACGCAGGATCTGAACCACCTACACGTACAGTaGTCTCATTCCAGTATAAGCCACAACCTCAAGTCT +
Preference number: 3 (lower is better)
Translates to: AITQDLNHLHVQ*SHSSISHNLKS
Trigger: AGACTTGAGGTTGTGGCTTATACTGGAATGAGACCACTGTACGTGTAGGTGGTTCAGATCCTGCGTAATGGC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339450.10
3UTR-3UTR CAA 90 bp TGGGCCCAGTTAGTTTTTAGGGAGTCACAGATTAGGCAGGCAACGAGGGGCATGAGTGGATTGTTGGCTTaGTCCTTAAGGTCATATAAA +
Preference number: 3 (lower is better)
Translates to: WAQLVFRESQIRQATRGMSGLLA*SLRSYK
Trigger: TTTATATGACCTTAAGGACAAAGCCAACAATCCACT...CATGCCCCTCGTTGCCTGCCTAATCTGTGACTCCCTAAAAACTAACTGGGCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339450.10
3UTR TCA 72 bp TCCCAAGGTGTCTGTTCTTTGGATATGAGTCGGAAATaGGGAGGATTTCTTGGAGAAACTTCTGGGGCAGGA +
Preference number: 3 (lower is better)
Translates to: SQGVCSLDMSRK*GGFLGETSGAG
Trigger: TCCTGCCCCAGAAGTTTCTCCAAGAAATCCTCCTCATTTCCGACTCATATCCAAAGAACAGACACCTTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487088.5
3UTR GCA 72 bp CCCTCACTGCTGGAACCAAAAAGCCATGAGAGGTACTaGTGTGATACACCTTACAAGCTACATAGCCATCTT +
Preference number: 3 (lower is better)
Translates to: PSLLEPKSHERY*CDTPYKLHSHL
Trigger: AAGATGGCTATGTAGCTTGTAAGGTGTATCACAGCAGTACCTCTCATGGCTTTTTGGTTCCAGCAGTGAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339450.10
3UTR TCA 72 bp AAGTCCAGGAAGAGCAATGATTCCAGTGTGCAGTGCTaGTGCATGTGTGAGCCTAACATGTTATTCAGCTCT +
Preference number: 3 (lower is better)
Translates to: KSRKSNDSSVQC*CMCEPNMLFSS
Trigger: AGAGCTGAATAACATGTTAGGCTCACACATGCATCAGCACTGCACACTGGAATCATTGCTCTTCCTGGACTT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339450.10
3UTR-3UTR CAA 90 bp TACGCAGGATCTGAACCACCTACACGTACAGTGGTCTCATTCCAGTATAAGCCACATGAAGGACTAACCTaGTATAACACAAGACTCCTA +
Preference number: 3 (lower is better)
Translates to: YAGSEPPTRTVVSFQYKPHEGLT*YNTRLL
Trigger: TAGGAGTCTTGTGTTATACAAGGTTAGTCCTTCATG...TGGCTTATACTGGAATGAGACCACTGTACGTGTAGGTGGTTCAGATCCTGCGTA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339450.10
3UTR TCA 72 bp TTAGGGAGTCACAGATTAGGCAGGCAACGAGGGGCATaGTTTAAAAAGCACATCATACACATGAGACAAGCA +
Preference number: 3 (lower is better)
Translates to: LGSHRLGRQRGA*FKKHIIHMRQA
Trigger: TGCTTGTCTCATGTGTATGATGTGCTTTTTAAATCATGCCCCTCGTTGCCTGCCTAATCTGTGACTCCCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339450.10
3UTR GCA 72 bp TTCAAGGACGTTTTCTCCGGCAATGCATACTTACTGTaGTCTTTCTATTCAGACAGATCCACAGACCACCTT +
Preference number: 3 (lower is better)
Translates to: FKDVFSGNAYLL*SFYSDRSTDHL
Trigger: AAGGTGGTCTGTGGATCTGTCTGAATAGAAAGAGCACAGTAAGTATGCATTGCCGGAGAAAACGTCCTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339450.10
3UTR TCA 72 bp TGTGTAATCCTAGGAACCCAGTTCAAGTGGTGGATTTaGGTTCTTCAGGAATCGAAGCATCAGTTTATCCCA +
Preference number: 3 (lower is better)
Translates to: CVILGTQFKWWI*VLQESKHQFIP
Trigger: TGGGATAAACTGATGCTTCGATTCCTGAAGAACTCAAATCCACCACTTGAACTGGGTTCCTAGGATTACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462592.5
3UTR-3UTR CAA 90 bp CCACTGGGCATGTACTTAGAGCTCATCCACAAGATTAAAATACAAAGAGATCGTCAGTGTACATCTTTCTaGATCCTAAAGGGGCAGCTA +
Preference number: 3 (lower is better)
Translates to: PLGMYLELIHKIKIQRDRQCTSF*ILKGQL
Trigger: TAGCTGCCCCTTTAGGATCAAGAAAGATGTACACTG...ACGATCTCTTTGTATTTTAATCTTGTGGATGAGCTCTAAGTACATGCCCAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489219.5
3UTR CCA 72 bp ACCCTTCTATTCAACACAGCACTAGAACAAGGCAAGTaGGACCTTTGTCGACACATGATTCGATTTCTTAAA +
Preference number: 3 (lower is better)
Translates to: TLLFNTALEQGK*DLCRHMIRFLK
Trigger: TTTAAGAAATCGAATCATGTGTCGACAAAGGTCCCACTTGCCTTGTTCTAGTGCTGTGTTGAATAGAAGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462592.5
3UTR CCA 72 bp TTCTTTGGATATGAGTCGGAAATGAGGAGGATTTCTTaGAGAAACTTCTGGGGCAGGAAGATACCAGTTTTT +
Preference number: 3 (lower is better)
Translates to: FFGYESEMRRIS*RNFWGRKIPVF
Trigger: AAAAACTGGTATCTTCCTGCCCCAGAAGTTTCTCCAAGAAATCCTCCTCATTTCCGACTCATATCCAAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487088.5
3UTR-3UTR CAA 90 bp TGGCTACATTCTTTGAGTTTAGAAAACGAGATAAAGAATTGCTCATATCTTCCCAGGCAAGTGGGACCTTaGTCGACACATGATTCGATT +
Preference number: 3 (lower is better)
Translates to: WLHSLSLENEIKNCSYLPRQVGP*STHDSI
Trigger: AATCGAATCATGTGTCGACAAAGGTCCCACTTGCCT...GGGAAGATATGAGCAATTCTTTATCTCGTTTTCTAAACTCAAAGAATGTAGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462592.5
3UTR TCA 72 bp CCTAATGATAAAAAGAAAGCTTGCACAGTTTACCATTaGTCTCACCAATGCCCTCACTGCTGGAACCAAAAA +
Preference number: 3 (lower is better)
Translates to: PNDKKKACTVYH*SHQCPHCWNQK
Trigger: TTTTTGGTTCCAGCAGTGAGGGCATTGGTGAGATCAATGGTAAACTGTGCAAGCTTTCTTTTTATCATTAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339450.10
3UTR GCA 72 bp AAACCCATTGATCCATATTCCAGAGTCCCGTTTAACTaGATTTCCTTCCAAGTCATGGAATGTTCTAGTCAT +
Preference number: 3 (lower is better)
Translates to: KPIDPYSRVPFN*ISFQVMECSSH
Trigger: ATGACTAGAACATTCCATGACTTGGAAGGAAATGCAGTTAAACGGGACTCTGGAATATGGATCAATGGGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487088.5
3UTR TCA 72 bp ACAGAGTTATATTCTCAAGGGGAATCATTACCTCAGTaGATGATATTTTACCCACCATCCACTAATACAACA +
Preference number: 3 (lower is better)
Translates to: TELYSQGESLPQ*MIFYPPSTNTT
Trigger: TGTTGTATTAGTGGATGGTGGGTAAAATATCATTCACTGAGGTAATGATTCCCCTTGAGAATATAACTCTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
CDS-3UTR GCA 90 bp ACACTCCTTCTACAGCTTCCTGAGACAGCAGGCTGGCTTGTGGCCCCCTGGGTGCCGCGTAGCACGAGCTaGTGCAGCGAGAGCTGCACC +
Preference number: 4 (lower is better)
Translates to: TLLLQLPETAGWLVAPWVPRSTS*CSESCT
Trigger: GGTGCAGCTCTCGCTGCAGCAGCTCGTGCTACGCGG...CACCCAGGGGGCCACAAGCCAGCCTGCTGTCTCAGGAAGCTGTAGAAGGAGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR GCA 90 bp GTCTTCCCCAGACAGATAGTGGGCAGCAATGGCCACGGTGACCATTCCTTCAGGTGCTGCAGCGAGAGCTaGACCAGCGTCCGCAGCGCG +
Preference number: 4 (lower is better)
Translates to: VFPRQIVGSNGHGDHSFRCCSES*TSVRSA
Trigger: CGCGCTGCGGACGCTGGTGCAGCTCTCGCTGCAGCA...CCTGAAGGAATGGTCACCGTGGCCATTGCTGCCCACTATCTGTCTGGGGAAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR CCA 90 bp AAACACTCCTTCTACAGCTTCCTGAGACAGCAGGCTGGCTTGTGGCCCCCTGGGCCTGAGACAGCAGGCTaGCTTGTGGCCCCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: KHSFYSFLRQQAGLWPPGPETAG*LVAPWV
Trigger: CACCCAGGGGGCCACAAGCCAGCCTGCTGTCTCAGG...CCCAGGGGGCCACAAGCCAGCCTGCTGTCTCAGGAAGCTGTAGAAGGAGTGTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR GCA 90 bp GTCTTCCCCAGACAGATAGTGGGCAGCAATGGCCACGGTGACCATTCCTTCAGGCCGCGTAGCACGAGCTaGTGCAGCGAGAGCTGCACC +
Preference number: 4 (lower is better)
Translates to: VFPRQIVGSNGHGDHSFRPRSTS*CSESCT
Trigger: GGTGCAGCTCTCGCTGCAGCAGCTCGTGCTACGCGG...CCTGAAGGAATGGTCACCGTGGCCATTGCTGCCCACTATCTGTCTGGGGAAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR GCA 90 bp CTTGTCTTCCCCAGACAGATAGTGGGCAGCAATGGCCACGGTGACCATTCCTTCTCCTCCCGCCGCCGCTaGACCCATCCACCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: LVFPRQIVGSNGHGDHSFSSRRR*THPPEA
Trigger: AGCCTCTGGTGGATGGGTGCAGCGGCGGCGGGAGGA...GAAGGAATGGTCACCGTGGCCATTGCTGCCCACTATCTGTCTGGGGAAGACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR GCA 90 bp GCACACCCAGGCAGAGGGAAATGTCCAATCTGGGAACTTTTCCTTCAGAGCATCGCGGGTGCACACAGGTaGGGTGCCCCGGAGCCTGCG +
Preference number: 4 (lower is better)
Translates to: AHPGRGKCPIWELFLQSIAGAHR*GAPEPA
Trigger: CGCAGGCTCCGGGGCACCGCACCTGTGTGCACCCGC...GATGCTCTGAAGGAAAAGTTCCCAGATTGGACATTTCCCTCTGCCTGGGTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487088.5
CDS-3UTR GCA 90 bp CTGCCATGCAGAGGCCTGGAGTCCATGGGAGTAAAAGACAAAGTAGTCTCCTCCTCTACTCCGACGCGGTaGCGCCTCACAGCAGCCGAC +
Preference number: 4 (lower is better)
Translates to: LPCRGLESMGVKDKVVSSSTPTR*RLTAAD
Trigger: GTCGGCTGCTGTGAGGCGGCACCGCGTCGGAGTAGA...GGAGGAGACTACTTTGTCTTTTACTCCCATGGACTCCAGGCCTCTGCATGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489219.5
CDS-3UTR GCA 90 bp ACTGCCATGCAGAGGCCTGGAGTCCATGGGAGTAAAAGACAAAGTAGTCTCCTCTCCACCAGAGGCTCCTaGGCTCGGGCCTCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: TAMQRPGVHGSKRQSSLLSTRGS*ARASLS
Trigger: GGAGAGGGAGGCCCGAGCGCAGGAGCCTCTGGTGGA...GAGGAGACTACTTTGTCTTTTACTCCCATGGACTCCAGGCCTCTGCATGGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR GCA 90 bp GAACTGCCATGCAGAGGCCTGGAGTCCATGGGAGTAAAAGACAAAGTAGTCTCCTGCACACAGGTGCGGTaGCCCGGAGCCTGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: ELPCRGLESMGVKDKVVSCTQVR*PGACAG
Trigger: TCCTGCGCAGGCTCCGGGGCACCGCACCTGTGTGCA...GGAGACTACTTTGTCTTTTACTCCCATGGACTCCAGGCCTCTGCATGGCAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487088.5
CDS-3UTR CCA 90 bp ACTGCCATGCAGAGGCCTGGAGTCCATGGGAGTAAAAGACAAAGTAGTCTCCTCGGCCGGTACCTGGCTTaGAGCGCGTCGAACTCCCCG +
Preference number: 4 (lower is better)
Translates to: TAMQRPGVHGSKRQSSLLGRYLA*SASNSP
Trigger: CGGGGAGTTCGACGCGCTCCAAGCCAGGTACCGGCC...GAGGAGACTACTTTGTCTTTTACTCCCATGGACTCCAGGCCTCTGCATGGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487088.5
CDS-3UTR TCA 90 bp ACACTCCTTCTACAGCTTCCTGAGACAGCAGGCTGGCTTGTGGCCCCCTGGGTGTCCAGTGTGCAGTGCTaGTGCATGTGTGAGCCTAAC +
Preference number: 4 (lower is better)
Translates to: TLLLQLPETAGWLVAPWVSSVQC*CMCEPN
Trigger: GTTAGGCTCACACATGCATCAGCACTGCACACTGGA...CACCCAGGGGGCCACAAGCCAGCCTGCTGTCTCAGGAAGCTGTAGAAGGAGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR GCA 90 bp TCAAGTGTCAACAGGCCATGCATCACTGCGCCACAGCTAAACCCTTATAGTGCTTGCTGCAGCGAGAGCTaGACCAGCGTCCGCAGCGCG +
Preference number: 4 (lower is better)
Translates to: SSVNRPCITAPQLNPYSACCSES*TSVRSA
Trigger: CGCGCTGCGGACGCTGGTGCAGCTCTCGCTGCAGCA...AGCACTATAAGGGTTTAGCTGTGGCGCAGTGATGCATGGCCTGTTGACACTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
CDS-3UTR GCA 90 bp ACCCAGGCAGAGGGAAATGTCCAATCTGGGAACTTTTCCTTCAGAGCATCCAGTTGCTGCAGCGAGAGCTaGACCAGCGTCCGCAGCGCG +
Preference number: 4 (lower is better)
Translates to: TQAEGNVQSGNFSFRASSCCSES*TSVRSA
Trigger: CGCGCTGCGGACGCTGGTGCAGCTCTCGCTGCAGCA...ACTGGATGCTCTGAAGGAAAAGTTCCCAGATTGGACATTTCCCTCTGCCTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR GCA 90 bp ACACTCCTTCTACAGCTTCCTGAGACAGCAGGCTGGCTTGTGGCCCCCTGGGTGTATCCAGAACTGCCATaGAGAGGCCTGGAGTCCATG +
Preference number: 4 (lower is better)
Translates to: TLLLQLPETAGWLVAPWVYPELP*RGLESM
Trigger: CATGGACTCCAGGCCTCTGCATGGCAGTTCTGGATA...CACCCAGGGGGCCACAAGCCAGCCTGCTGTCTCAGGAAGCTGTAGAAGGAGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR GCA 90 bp ACACTCCTTCTACAGCTTCCTGAGACAGCAGGCTGGCTTGTGGCCCCCTGGGTGCAAAGAGATCGTAGGTaGACACCCAGGCAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: TLLLQLPETAGWLVAPWVQRDRR*TPRQRE
Trigger: TTCCCTCTGCCTGGGTGTGCACCTACGATCTCTTTG...CACCCAGGGGGCCACAAGCCAGCCTGCTGTCTCAGGAAGCTGTAGAAGGAGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR GCA 90 bp TCAAGTGTCAACAGGCCATGCATCACTGCGCCACAGCTAAACCCTTATAGTGCTTCCTCCCGCCGCCGCTaGACCCATCCACCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: SSVNRPCITAPQLNPYSASSRRR*THPPEA
Trigger: AGCCTCTGGTGGATGGGTGCAGCGGCGGCGGGAGGA...AGCACTATAAGGGTTTAGCTGTGGCGCAGTGATGCATGGCCTGTTGACACTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
CDS-3UTR GCA 90 bp AAACCATGTCACATGGAGTATCCACTGGGCATGTACTTAGAGCTCATCCACAAGTCCGGCAGGGGCGGGTaGACACAGGTGCGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: KPCHMEYPLGMYLELIHKSGRGG*TQVRCP
Trigger: GGGGCACCGCACCTGTGTGCACCCGCCCCTGCCGGA...CTTGTGGATGAGCTCTAAGTACATGCCCAGTGGATACTCCATGTGACATGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487088.5
CDS-3UTR CCA 90 bp GTCTTCCCCAGACAGATAGTGGGCAGCAATGGCCACGGTGACCATTCCTTCAGGGCCAAGACAGCATGCTaGGCTCCATCTCTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: VFPRQIVGSNGHGDHSFRAKTAC*APSLGS
Trigger: GGAACCCAGAGATGGAGCCCAGCATGCTGTCTTGGC...CCTGAAGGAATGGTCACCGTGGCCATTGCTGCCCACTATCTGTCTGGGGAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR CCA 90 bp ACCCAGGCAGAGGGAAATGTCCAATCTGGGAACTTTTCCTTCAGAGCATCCAGTACCCCACGTGCAGCCTaGGAGGGGTCAGCGAGTCCC +
Preference number: 4 (lower is better)
Translates to: TQAEGNVQSGNFSFRASSTPRAA*EGSASP
Trigger: GGGACTCGCTGACCCCTCCCAGGCTGCACGTGGGGT...ACTGGATGCTCTGAAGGAAAAGTTCCCAGATTGGACATTTCCCTCTGCCTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000487088.5
CDS-3UTR GCA 90 bp TACGCAGGATCTGAACCACCTACACGTACAGTGGTCTCATTCCAGTATAAGCCAGCCACGAGCCTCAGCTaGCAGCCCAACCGCCCCAAC +
Preference number: 4 (lower is better)
Translates to: YAGSEPPTRTVVSFQYKPATSLS*QPNRPN
Trigger: GTTGGGGCGGTTGGGCTGGCAGCTGAGGCTCGTGGC...TGGCTTATACTGGAATGAGACCACTGTACGTGTAGGTGGTTCAGATCCTGCGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR GCA 90 bp CATCCACGTAACATAGGGAGAAACCATGTCACATGGAGTATCCACTGGGCATGTGCCACGAGCCTCAGCTaGCAGCCCAACCGCCCCAAC +
Preference number: 4 (lower is better)
Translates to: HPRNIGRNHVTWSIHWACATSLS*QPNRPN
Trigger: GTTGGGGCGGTTGGGCTGGCAGCTGAGGCTCGTGGC...ACATGCCCAGTGGATACTCCATGTGACATGGTTTCTCCCTATGTTACGTGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000462592.5
CDS-3UTR GCA 90 bp CATCCACGTAACATAGGGAGAAACCATGTCACATGGAGTATCCACTGGGCATGTTCCACCAGAGGCTCCTaGGCTCGGGCCTCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: HPRNIGRNHVTWSIHWACSTRGS*ARASLS
Trigger: GGAGAGGGAGGCCCGAGCGCAGGAGCCTCTGGTGGA...ACATGCCCAGTGGATACTCCATGTGACATGGTTTCTCCCTATGTTACGTGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000487088.5
ENST00000489219.5
CDS-3UTR TCA 90 bp GTCTTCCCCAGACAGATAGTGGGCAGCAATGGCCACGGTGACCATTCCTTCAGGCAGCAATGGCCACGGTaGCCATTCCTTCAGGATGTT +
Preference number: 4 (lower is better)
Translates to: VFPRQIVGSNGHGDHSFRQQWPR*PFLQDV
Trigger: AACATCCTGAAGGAATGGTCACCGTGGCCATTGCTG...CCTGAAGGAATGGTCACCGTGGCCATTGCTGCCCACTATCTGTCTGGGGAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR TCA 90 bp AAACACTCCTTCTACAGCTTCCTGAGACAGCAGGCTGGCTTGTGGCCCCCTGGGCCATTACGCAGGATCTaGACCACCTACACGTACAGT +
Preference number: 4 (lower is better)
Translates to: KHSFYSFLRQQAGLWPPGPLRRI*TTYTYS
Trigger: ACTGTACGTGTAGGTGGTTCAGATCCTGCGTAATGG...CCCAGGGGGCCACAAGCCAGCCTGCTGTCTCAGGAAGCTGTAGAAGGAGTGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR GCA 90 bp TCAAGTGTCAACAGGCCATGCATCACTGCGCCACAGCTAAACCCTTATAGTGCTCGTAGCACGAGCTGCTaGAGCGAGAGCTGCACCAGC +
Preference number: 4 (lower is better)
Translates to: SSVNRPCITAPQLNPYSARSTSC*SESCTS
Trigger: GCTGGTGCAGCTCTCGCTGCAGCAGCTCGTGCTACG...AGCACTATAAGGGTTTAGCTGTGGCGCAGTGATGCATGGCCTGTTGACACTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
CDS-3UTR GCA 90 bp GTCTTCCCCAGACAGATAGTGGGCAGCAATGGCCACGGTGACCATTCCTTCAGGCAAAGAGATCGTAGGTaGACACCCAGGCAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: VFPRQIVGSNGHGDHSFRQRDRR*TPRQRE
Trigger: TTCCCTCTGCCTGGGTGTGCACCTACGATCTCTTTG...CCTGAAGGAATGGTCACCGTGGCCATTGCTGCCCACTATCTGTCTGGGGAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR GCA 90 bp AAACACTCCTTCTACAGCTTCCTGAGACAGCAGGCTGGCTTGTGGCCCCCTGGGCACCAATGCCCTCACTaGTGGAACCAAAAAGCCATG +
Preference number: 4 (lower is better)
Translates to: KHSFYSFLRQQAGLWPPGHQCPH*WNQKAM
Trigger: CATGGCTTTTTGGTTCCAGCAGTGAGGGCATTGGTG...CCCAGGGGGCCACAAGCCAGCCTGCTGTCTCAGGAAGCTGTAGAAGGAGTGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR GCA 90 bp GGAGAAACCATGTCACATGGAGTATCCACTGGGCATGTACTTAGAGCTCATCCATCTACTCCGACGCGGTaGCGCCTCACAGCAGCCGAC +
Preference number: 4 (lower is better)
Translates to: GETMSHGVSTGHVLRAHPSTPTR*RLTAAD
Trigger: GTCGGCTGCTGTGAGGCGGCACCGCGTCGGAGTAGA...TGGATGAGCTCTAAGTACATGCCCAGTGGATACTCCATGTGACATGGTTTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000489219.5
CDS-3UTR GCA 90 bp CCTAGGAACCCAGTTCAAGTGGTGGATTTGAGTTCTTCAGGAATCGAAGCATCATCCACCAGAGGCTCCTaGGCTCGGGCCTCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: PRNPVQVVDLSSSGIEASSTRGS*ARASLS
Trigger: GGAGAGGGAGGCCCGAGCGCAGGAGCCTCTGGTGGA...TGATGCTTCGATTCCTGAAGAACTCAAATCCACCACTTGAACTGGGTTCCTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR GCA 90 bp ATGGAAGTCCCTGCAGTAAGTAGGCAACATGCTACCCTTCTATTCAACACAGCATCCTCCCGCCGCCGCTaGACCCATCCACCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: MEVPAVSRQHATLLFNTASSRRR*THPPEA
Trigger: AGCCTCTGGTGGATGGGTGCAGCGGCGGCGGGAGGA...TGCTGTGTTGAATAGAAGGGTAGCATGTTGCCTACTTACTGCAGGGACTTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR TCA 90 bp CCATTGGCTCTGGAGAATCTGAGACACCTCCATCCACACCCACAGCTCAGGTTAGAGAGGGGTAGGCAATaGCAAACAGGCCCAGCACAT +
Preference number: 4 (lower is better)
Translates to: PLALENLRHLHPHPQLRLERGRQ*QTGPAH
Trigger: ATGTGCTGGGCCTGTTTGTCATTGCCTACCCCTCTC...TAACCTGAGCTGTGGGTGTGGATGGAGGTGTCTCAGATTCTCCAGAGCCAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR TCA 90 bp CTGCCATGCAGAGGCCTGGAGTCCATGGGAGTAAAAGACAAAGTAGTCTCCTCCGAGAGGGGTAGGCAATaGCAAACAGGCCCAGCACAT +
Preference number: 4 (lower is better)
Translates to: LPCRGLESMGVKDKVVSSERGRQ*QTGPAH
Trigger: ATGTGCTGGGCCTGTTTGTCATTGCCTACCCCTCTC...GGAGGAGACTACTTTGTCTTTTACTCCCATGGACTCCAGGCCTCTGCATGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR TCA 90 bp CCATTGGCTCTGGAGAATCTGAGACACCTCCATCCACACCCACAGCTCAGGTTATGGCTCTGGAGAATCTaGGACACCTCCATCCACACC +
Preference number: 4 (lower is better)
Translates to: PLALENLRHLHPHPQLRLWLWRI*DTSIHT
Trigger: GGTGTGGATGGAGGTGTCTCAGATTCTCCAGAGCCA...TAACCTGAGCTGTGGGTGTGGATGGAGGTGTCTCAGATTCTCCAGAGCCAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR CCA 90 bp ACACTCCTTCTACAGCTTCCTGAGACAGCAGGCTGGCTTGTGGCCCCCTGGGTGGGGAAATGTCCAATCTaGGAACTTTTCCTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: TLLLQLPETAGWLVAPWVGKCPI*ELFLQS
Trigger: GCTCTGAAGGAAAAGTTCCCAGATTGGACATTTCCC...CACCCAGGGGGCCACAAGCCAGCCTGCTGTCTCAGGAAGCTGTAGAAGGAGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR CCA 90 bp ACACTCCTTCTACAGCTTCCTGAGACAGCAGGCTGGCTTGTGGCCCCCTGGGTGCACCTACACGTACAGTaGTCTCATTCCAGTATAAGC +
Preference number: 4 (lower is better)
Translates to: TLLLQLPETAGWLVAPWVHLHVQ*SHSSIS
Trigger: GCTTATACTGGAATGAGACCACTGTACGTGTAGGTG...CACCCAGGGGGCCACAAGCCAGCCTGCTGTCTCAGGAAGCTGTAGAAGGAGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR TCA 90 bp ACACTCCTTCTACAGCTTCCTGAGACAGCAGGCTGGCTTGTGGCCCCCTGGGTGACGAAAGTCAGTATCTaGAGGAATGATTCCACTCTG +
Preference number: 4 (lower is better)
Translates to: TLLLQLPETAGWLVAPWVTKVSI*RNDSTL
Trigger: CAGAGTGGAATCATTCCTTCAGATACTGACTTTCGT...CACCCAGGGGGCCACAAGCCAGCCTGCTGTCTCAGGAAGCTGTAGAAGGAGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR TCA 90 bp GCACACCCAGGCAGAGGGAAATGTCCAATCTGGGAACTTTTCCTTCAGAGCATCGAGAGGGGTAGGCAATaGCAAACAGGCCCAGCACAT +
Preference number: 4 (lower is better)
Translates to: AHPGRGKCPIWELFLQSIERGRQ*QTGPAH
Trigger: ATGTGCTGGGCCTGTTTGTCATTGCCTACCCCTCTC...GATGCTCTGAAGGAAAAGTTCCCAGATTGGACATTTCCCTCTGCCTGGGTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR TCA 90 bp CCATTGGCTCTGGAGAATCTGAGACACCTCCATCCACACCCACAGCTCAGGTTACTCCTCCTTTACTTGTaGCTGGGGTGCCATTGCCAA +
Preference number: 4 (lower is better)
Translates to: PLALENLRHLHPHPQLRLLLLYL*LGCHCQ
Trigger: TTGGCAATGGCACCCCAGTCACAAGTAAAGGAGGAG...TAACCTGAGCTGTGGGTGTGGATGGAGGTGTCTCAGATTCTCCAGAGCCAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR TCA 90 bp AAACACTCCTTCTACAGCTTCCTGAGACAGCAGGCTGGCTTGTGGCCCCCTGGGAGCACATCATACACATaGGACAAGCAGCTTCAAGGA +
Preference number: 4 (lower is better)
Translates to: KHSFYSFLRQQAGLWPPGSTSYT*DKQLQG
Trigger: TCCTTGAAGCTGCTTGTCTCATGTGTATGATGTGCT...CCCAGGGGGCCACAAGCCAGCCTGCTGTCTCAGGAAGCTGTAGAAGGAGTGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR GCA 90 bp TCTCTAATGGTACTGCATATGGTGTGTAATCCTAGGAACCCAGTTCAAGTGGTGCCGCGTAGCACGAGCTaGTGCAGCGAGAGCTGCACC +
Preference number: 4 (lower is better)
Translates to: SLMVLHMVCNPRNPVQVVPRSTS*CSESCT
Trigger: GGTGCAGCTCTCGCTGCAGCAGCTCGTGCTACGCGG...CACCACTTGAACTGGGTTCCTAGGATTACACACCATATGCAGTACCATTAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR GCA 90 bp ACACTCCTTCTACAGCTTCCTGAGACAGCAGGCTGGCTTGTGGCCCCCTGGGTGTGTTCTTCTGAAACCTaGACTTCTATCCAGAACTGC +
Preference number: 4 (lower is better)
Translates to: TLLLQLPETAGWLVAPWVCSSET*TSIQNC
Trigger: GCAGTTCTGGATAGAAGTGCAGGTTTCAGAAGAACA...CACCCAGGGGGCCACAAGCCAGCCTGCTGTCTCAGGAAGCTGTAGAAGGAGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR GCA 90 bp TGGGCCCAGTTAGTTTTTAGGGAGTCACAGATTAGGCAGGCAACGAGGGGCATGAGTGTCAACAGGCCATaGATCACTGCGCCACAGCTA +
Preference number: 4 (lower is better)
Translates to: WAQLVFRESQIRQATRGMSVNRP*ITAPQL
Trigger: TAGCTGTGGCGCAGTGATGCATGGCCTGTTGACACT...CATGCCCCTCGTTGCCTGCCTAATCTGTGACTCCCTAAAAACTAACTGGGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR CCA 90 bp AAACACTCCTTCTACAGCTTCCTGAGACAGCAGGCTGGCTTGTGGCCCCCTGGGGGGCAGCTATTGAAGTaGATTGTTGGCTTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: KHSFYSFLRQQAGLWPPGGQLLK*IVGFVL
Trigger: AAGGACAAAGCCAACAATCCACTTCAATAGCTGCCC...CCCAGGGGGCCACAAGCCAGCCTGCTGTCTCAGGAAGCTGTAGAAGGAGTGTTT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR CCA 90 bp AAACACTCCTTCTACAGCTTCCTGAGACAGCAGGCTGGCTTGTGGCCCCCTGGGCATGTTATTCAGCTCTaGTTGCAGCCCCATCTACAT +
Preference number: 4 (lower is better)
Translates to: KHSFYSFLRQQAGLWPPGHVIQL*LQPHLH
Trigger: ATGTAGATGGGGCTGCAACCAGAGCTGAATAACATG...CCCAGGGGGCCACAAGCCAGCCTGCTGTCTCAGGAAGCTGTAGAAGGAGTGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR CCA 90 bp AAGGAAAACCACAAAGAGGTGCATTCTCCTCACAGTGAGCTCGGATACTATCATGGAGCGGCCGGTACCTaGCTTGGAGCGCGTCGAACT +
Preference number: 4 (lower is better)
Translates to: KENHKEVHSPHSELGYYHGAAGT*LGARRT
Trigger: AGTTCGACGCGCTCCAAGCCAGGTACCGGCCGCTCC...ATGATAGTATCCGAGCTCACTGTGAGGAGAATGCACCTCTTTGTGGTTTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487088.5
CDS-3UTR TCA 90 bp CTTGTCTTCCCCAGACAGATAGTGGGCAGCAATGGCCACGGTGACCATTCCTTCCTCGGATACTATCATTaGTCTCAGGAATGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: LVFPRQIVGSNGHGDHSFLGYYH*SQECEG
Trigger: CCCCTCACATTCCTGAGATCAATGATAGTATCCGAG...GAAGGAATGGTCACCGTGGCCATTGCTGCCCACTATCTGTCTGGGGAAGACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR TCA 90 bp GAACTGCCATGCAGAGGCCTGGAGTCCATGGGAGTAAAAGACAAAGTAGTCTCCCTCCTCCTTTACTTGTaGCTGGGGTGCCATTGCCAA +
Preference number: 4 (lower is better)
Translates to: ELPCRGLESMGVKDKVVSLLLYL*LGCHCQ
Trigger: TTGGCAATGGCACCCCAGTCACAAGTAAAGGAGGAG...GGAGACTACTTTGTCTTTTACTCCCATGGACTCCAGGCCTCTGCATGGCAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR TCA 90 bp TCAAGTGTCAACAGGCCATGCATCACTGCGCCACAGCTAAACCCTTATAGTGCTCACTTGTCAGGACAGTaGGTCACCAGCTCAGCACAG +
Preference number: 4 (lower is better)
Translates to: SSVNRPCITAPQLNPYSAHLSGQ*VTSSAQ
Trigger: CTGTGCTGAGCTGGTGACTCACTGTCCTGACAAGTG...AGCACTATAAGGGTTTAGCTGTGGCGCAGTGATGCATGGCCTGTTGACACTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR GCA 90 bp GTCTTCCCCAGACAGATAGTGGGCAGCAATGGCCACGGTGACCATTCCTTCAGGTGTGAGCAATGGGAATaGTACCCAGACAGCACTAAT +
Preference number: 4 (lower is better)
Translates to: VFPRQIVGSNGHGDHSFRCEQWE*YPDSTN
Trigger: ATTAGTGCTGTCTGGGTAGCATTCCCATTGCTCACA...CCTGAAGGAATGGTCACCGTGGCCATTGCTGCCCACTATCTGTCTGGGGAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR GCA 90 bp CTGCCATGCAGAGGCCTGGAGTCCATGGGAGTAAAAGACAAAGTAGTCTCCTCCCCTTGGGCACCATGCTaGTTGAAGTCCTTATGCACA +
Preference number: 4 (lower is better)
Translates to: LPCRGLESMGVKDKVVSSPWAPC*LKSLCT
Trigger: TGTGCATAAGGACTTCAAGCAGCATGGTGCCCAAGG...GGAGGAGACTACTTTGTCTTTTACTCCCATGGACTCCAGGCCTCTGCATGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489219.5
CDS-3UTR GCA 90 bp CTTGTCTTCCCCAGACAGATAGTGGGCAGCAATGGCCACGGTGACCATTCCTTCTTTCCTTGGGCACCATaGTGCTTGAAGTCCTTATGC +
Preference number: 4 (lower is better)
Translates to: LVFPRQIVGSNGHGDHSFFPWAP*CLKSLC
Trigger: GCATAAGGACTTCAAGCAGCATGGTGCCCAAGGAAA...GAAGGAATGGTCACCGTGGCCATTGCTGCCCACTATCTGTCTGGGGAAGACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489219.5
CDS-3UTR GCA 90 bp CCACTGGGCATGTACTTAGAGCTCATCCACAAGATTAAAATACAAAGAGATCGTTCCTCCCGCCGCCGCTaGACCCATCCACCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: PLGMYLELIHKIKIQRDRSSRRR*THPPEA
Trigger: AGCCTCTGGTGGATGGGTGCAGCGGCGGCGGGAGGA...ACGATCTCTTTGTATTTTAATCTTGTGGATGAGCTCTAAGTACATGCCCAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR GCA 90 bp GGAGAAACCATGTCACATGGAGTATCCACTGGGCATGTACTTAGAGCTCATCCACTGGCAACCCCAATCTaGACCACGAGCTTAACCGGG +
Preference number: 4 (lower is better)
Translates to: GETMSHGVSTGHVLRAHPLATPI*TTSLTG
Trigger: CCCGGTTAAGCTCGTGGTGCAGATTGGGGTTGCCAG...TGGATGAGCTCTAAGTACATGCCCAGTGGATACTCCATGTGACATGGTTTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487088.5
CDS-3UTR CCA 90 bp AAACACTCCTTCTACAGCTTCCTGAGACAGCAGGCTGGCTTGTGGCCCCCTGGGCAGAATTTCATTTTCTaGACTTCCTGTAGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: KHSFYSFLRQQAGLWPPGQNFIF*TSCSPG
Trigger: CCCAGGACTACAGGAAGTCCAGAAAATGAAATTCTG...CCCAGGGGGCCACAAGCCAGCCTGCTGTCTCAGGAAGCTGTAGAAGGAGTGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR TCA 90 bp GTCTTCCCCAGACAGATAGTGGGCAGCAATGGCCACGGTGACCATTCCTTCAGGGAAGTGGTTATACCATaGGAGAGACTGTCCAATAAG +
Preference number: 4 (lower is better)
Translates to: VFPRQIVGSNGHGDHSFREVVIP*ERLSNK
Trigger: CTTATTGGACAGTCTCTCTCATGGTATAACCACTTC...CCTGAAGGAATGGTCACCGTGGCCATTGCTGCCCACTATCTGTCTGGGGAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR TCA 90 bp TCAAGTGTCAACAGGCCATGCATCACTGCGCCACAGCTAAACCCTTATAGTGCTCTCCTCCTTTACTTGTaGCTGGGGTGCCATTGCCAA +
Preference number: 4 (lower is better)
Translates to: SSVNRPCITAPQLNPYSALLLYL*LGCHCQ
Trigger: TTGGCAATGGCACCCCAGTCACAAGTAAAGGAGGAG...AGCACTATAAGGGTTTAGCTGTGGCGCAGTGATGCATGGCCTGTTGACACTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
CDS-3UTR GCA 90 bp TCAAGTGTCAACAGGCCATGCATCACTGCGCCACAGCTAAACCCTTATAGTGCTGCCAGCCAAAATGGATaGCAGCACAACATCAGGTGG +
Preference number: 4 (lower is better)
Translates to: SSVNRPCITAPQLNPYSAASQNG*QHNIRW
Trigger: CCACCTGATGTTGTGCTGGCATCCATTTTGGCTGGC...AGCACTATAAGGGTTTAGCTGTGGCGCAGTGATGCATGGCCTGTTGACACTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
CDS-3UTR GCA 90 bp ACCCAGGCAGAGGGAAATGTCCAATCTGGGAACTTTTCCTTCAGAGCATCCAGTTATCCAGAACTGCCATaGAGAGGCCTGGAGTCCATG +
Preference number: 4 (lower is better)
Translates to: TQAEGNVQSGNFSFRASSYPELP*RGLESM
Trigger: CATGGACTCCAGGCCTCTGCATGGCAGTTCTGGATA...ACTGGATGCTCTGAAGGAAAAGTTCCCAGATTGGACATTTCCCTCTGCCTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR GCA 90 bp TCCAGTGACCTACACAGAGTTATATTCTCAAGGGGAATCATTACCTCAGTGAATTCTACTCCGACGCGGTaGCGCCTCACAGCAGCCGAC +
Preference number: 4 (lower is better)
Translates to: SSDLHRVIFSRGIITSVNSTPTR*RLTAAD
Trigger: GTCGGCTGCTGTGAGGCGGCACCGCGTCGGAGTAGA...ATTCACTGAGGTAATGATTCCCCTTGAGAATATAACTCTGTGTAGGTCACTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
CDS-3UTR CCA 90 bp AAACCATGTCACATGGAGTATCCACTGGGCATGTACTTAGAGCTCATCCACAAGGCCAAGACAGCATGCTaGGCTCCATCTCTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: KPCHMEYPLGMYLELIHKAKTAC*APSLGS
Trigger: GGAACCCAGAGATGGAGCCCAGCATGCTGTCTTGGC...CTTGTGGATGAGCTCTAAGTACATGCCCAGTGGATACTCCATGTGACATGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000487088.5
ENST00000489219.5
CDS-3UTR CCA 90 bp AAACACTCCTTCTACAGCTTCCTGAGACAGCAGGCTGGCTTGTGGCCCCCTGGGAAGAAACACTCTCTTTaGCTTCGGATTAGCAGGATT +
Preference number: 4 (lower is better)
Translates to: KHSFYSFLRQQAGLWPPGKKHSL*LRISRI
Trigger: AATCCTGCTAATCCGAAGCCAAAGAGAGTGTTTCTT...CCCAGGGGGCCACAAGCCAGCCTGCTGTCTCAGGAAGCTGTAGAAGGAGTGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR CCA 90 bp CCATTGGCTCTGGAGAATCTGAGACACCTCCATCCACACCCACAGCTCAGGTTATCCTTTACTTGTGACTaGGGTGCCATTGCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: PLALENLRHLHPHPQLRLSFTCD*GAIAKR
Trigger: TCTCTTGGCAATGGCACCCCAGTCACAAGTAAAGGA...TAACCTGAGCTGTGGGTGTGGATGGAGGTGTCTCAGATTCTCCAGAGCCAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR TCA 90 bp CTTGTCTTCCCCAGACAGATAGTGGGCAGCAATGGCCACGGTGACCATTCCTTCACGAAAGTCAGTATCTaGAGGAATGATTCCACTCTG +
Preference number: 4 (lower is better)
Translates to: LVFPRQIVGSNGHGDHSFTKVSI*RNDSTL
Trigger: CAGAGTGGAATCATTCCTTCAGATACTGACTTTCGT...GAAGGAATGGTCACCGTGGCCATTGCTGCCCACTATCTGTCTGGGGAAGACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR TCA 90 bp CTGCTGGAACCAAAAAGCCATGAGAGGTACTGCTGTGATACACCTTACAAGCTAGAGAGGGGTAGGCAATaGCAAACAGGCCCAGCACAT +
Preference number: 4 (lower is better)
Translates to: LLEPKSHERYCCDTPYKLERGRQ*QTGPAH
Trigger: ATGTGCTGGGCCTGTTTGTCATTGCCTACCCCTCTC...TAGCTTGTAAGGTGTATCACAGCAGTACCTCTCATGGCTTTTTGGTTCCAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR TCA 90 bp CATCCACGTAACATAGGGAGAAACCATGTCACATGGAGTATCCACTGGGCATGTGCACACAGAGCTTTGTaGGCAATGGGAATGCTACCC +
Preference number: 4 (lower is better)
Translates to: HPRNIGRNHVTWSIHWACAHRAL*AMGMLP
Trigger: GGGTAGCATTCCCATTGCTCACAAAGCTCTGTGTGC...ACATGCCCAGTGGATACTCCATGTGACATGGTTTCTCCCTATGTTACGTGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000487088.5
ENST00000489219.5
CDS-3UTR TCA 90 bp TGCCATTACGCAGGATCTGAACCACCTACACGTACAGTGGTCTCATTCCAGTATGGGCACCATGCTGCTTaGAGTCCTTATGCACACAGA +
Preference number: 4 (lower is better)
Translates to: CHYAGSEPPTRTVVSFQYGHHAA*SPYAHR
Trigger: TCTGTGTGCATAAGGACTTCAAGCAGCATGGTGCCC...ATACTGGAATGAGACCACTGTACGTGTAGGTGGTTCAGATCCTGCGTAATGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR TCA 90 bp TACGCAGGATCTGAACCACCTACACGTACAGTGGTCTCATTCCAGTATAAGCCACCACTGAGAAAGTGTTaGCCCTTTGTGGGCTCGAAC +
Preference number: 4 (lower is better)
Translates to: YAGSEPPTRTVVSFQYKPPLRKC*PFVGSN
Trigger: GTTCGAGCCCACAAAGGGTCAACACTTTCTCAGTGG...TGGCTTATACTGGAATGAGACCACTGTACGTGTAGGTGGTTCAGATCCTGCGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR TCA 90 bp TTGACCCTTTGTGGGCTCGAACATAGAAGGACATATGGCTTGGTCCTGTTGCTTCCACTGAGAAAGTGTTaGCCCTTTGTGGGCTCGAAC +
Preference number: 4 (lower is better)
Translates to: LTLCGLEHRRTYGLVLLLPLRKC*PFVGSN
Trigger: GTTCGAGCCCACAAAGGGTCAACACTTTCTCAGTGG...AAGCAACAGGACCAAGCCATATGTCCTTCTATGTTCGAGCCCACAAAGGGTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487088.5
CDS-3UTR TCA 90 bp TGCCATTACGCAGGATCTGAACCACCTACACGTACAGTGGTCTCATTCCAGTATCAGCAATGGCCACGGTaGCCATTCCTTCAGGATGTT +
Preference number: 4 (lower is better)
Translates to: CHYAGSEPPTRTVVSFQYQQWPR*PFLQDV
Trigger: AACATCCTGAAGGAATGGTCACCGTGGCCATTGCTG...ATACTGGAATGAGACCACTGTACGTGTAGGTGGTTCAGATCCTGCGTAATGGCA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR TCA 90 bp ACCCAGGCAGAGGGAAATGTCCAATCTGGGAACTTTTCCTTCAGAGCATCCAGTAGTACCCACATGTGCTaGAGTGCCAAAAGACTGGCA +
Preference number: 4 (lower is better)
Translates to: TQAEGNVQSGNFSFRASSSTHMC*SAKRLA
Trigger: TGCCAGTCTTTTGGCACTTCAGCACATGTGGGTACT...ACTGGATGCTCTGAAGGAAAAGTTCCCAGATTGGACATTTCCCTCTGCCTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489219.5
CDS-3UTR GCA 90 bp AAACACTCCTTCTACAGCTTCCTGAGACAGCAGGCTGGCTTGTGGCCCCCTGGGTCTTATGAAGGCTGTTaGTTTGCACTTCAATCAGTT +
Preference number: 4 (lower is better)
Translates to: KHSFYSFLRQQAGLWPPGSYEGC*FALQSV
Trigger: AACTGATTGAAGTGCAAAGCAACAGCCTTCATAAGA...CCCAGGGGGCCACAAGCCAGCCTGCTGTCTCAGGAAGCTGTAGAAGGAGTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR GCA 90 bp TCAAGTGTCAACAGGCCATGCATCACTGCGCCACAGCTAAACCCTTATAGTGCTCCTTGGGCACCATGCTaGTTGAAGTCCTTATGCACA +
Preference number: 4 (lower is better)
Translates to: SSVNRPCITAPQLNPYSAPWAPC*LKSLCT
Trigger: TGTGCATAAGGACTTCAAGCAGCATGGTGCCCAAGG...AGCACTATAAGGGTTTAGCTGTGGCGCAGTGATGCATGGCCTGTTGACACTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
CDS-3UTR GCA 90 bp CATCCACGTAACATAGGGAGAAACCATGTCACATGGAGTATCCACTGGGCATGTGCCAGCCAAAATGGATaGCAGCACAACATCAGGTGG +
Preference number: 4 (lower is better)
Translates to: HPRNIGRNHVTWSIHWACASQNG*QHNIRW
Trigger: CCACCTGATGTTGTGCTGGCATCCATTTTGGCTGGC...ACATGCCCAGTGGATACTCCATGTGACATGGTTTCTCCCTATGTTACGTGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000489219.5
CDS-3UTR GCA 90 bp GGAGAAACCATGTCACATGGAGTATCCACTGGGCATGTACTTAGAGCTCATCCATATCCAGAACTGCCATaGAGAGGCCTGGAGTCCATG +
Preference number: 4 (lower is better)
Translates to: GETMSHGVSTGHVLRAHPYPELP*RGLESM
Trigger: CATGGACTCCAGGCCTCTGCATGGCAGTTCTGGATA...TGGATGAGCTCTAAGTACATGCCCAGTGGATACTCCATGTGACATGGTTTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000487088.5
ENST00000489219.5
CDS-3UTR GCA 90 bp TTGACCCTTTGTGGGCTCGAACATAGAAGGACATATGGCTTGGTCCTGTTGCTTCAAAGAGATCGTAGGTaGACACCCAGGCAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: LTLCGLEHRRTYGLVLLLQRDRR*TPRQRE
Trigger: TTCCCTCTGCCTGGGTGTGCACCTACGATCTCTTTG...AAGCAACAGGACCAAGCCATATGTCCTTCTATGTTCGAGCCCACAAAGGGTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487088.5
CDS-3UTR GCA 90 bp GGAGAAACCATGTCACATGGAGTATCCACTGGGCATGTACTTAGAGCTCATCCAAGTGTCAACAGGCCATaGATCACTGCGCCACAGCTA +
Preference number: 4 (lower is better)
Translates to: GETMSHGVSTGHVLRAHPSVNRP*ITAPQL
Trigger: TAGCTGTGGCGCAGTGATGCATGGCCTGTTGACACT...TGGATGAGCTCTAAGTACATGCCCAGTGGATACTCCATGTGACATGGTTTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
CDS-3UTR GCA 90 bp ATTTCCTTCCAAGTCATGGAATGTTCTAGTCATATGCTGAAGAAACACTCTCTTTCCACCAGAGGCTCCTaGGCTCGGGCCTCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: ISFQVMECSSHMLKKHSLSTRGS*ARASLS
Trigger: GGAGAGGGAGGCCCGAGCGCAGGAGCCTCTGGTGGA...AAGAGAGTGTTTCTTCAGCATATGACTAGAACATTCCATGACTTGGAAGGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487088.5
CDS-3UTR GCA 90 bp AATGTGAGGGGTTATGTGAGAAATTCCAGTATAATCAAACCCATTGATCCATATCGGTGCCCCGGAGCCTaGGCAGGAGCCGCAAACGGA +
Preference number: 4 (lower is better)
Translates to: NVRGYVRNSSIIKPIDPYRCPGA*AGAANG
Trigger: TCCGTTTGCGGCTCCTGCGCAGGCTCCGGGGCACCG...ATATGGATCAATGGGTTTGATTATACTGGAATTTCTCACATAACCCCTCACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487088.5
CDS-3UTR CCA 90 bp CCCTTTGTGGGCTCGAACATAGAAGGACATATGGCTTGGTCCTGTTGCTTCAAAGCTGGGCTCCATCTCTaGGTTCCAGCTTTACCACAA +
Preference number: 4 (lower is better)
Translates to: PFVGSNIEGHMAWSCCFKAGLHL*VPALPQ
Trigger: TTGTGGTAAAGCTGGAACCCAGAGATGGAGCCCAGC...TTTGAAGCAACAGGACCAAGCCATATGTCCTTCTATGTTCGAGCCCACAAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487088.5
CDS-3UTR CCA 90 bp GTCTTCCCCAGACAGATAGTGGGCAGCAATGGCCACGGTGACCATTCCTTCAGGCACCTGCTCTCTGAATaGAATCTGTTAGAATTCTGT +
Preference number: 4 (lower is better)
Translates to: VFPRQIVGSNGHGDHSFRHLLSE*NLLEFC
Trigger: ACAGAATTCTAACAGATTCCATTCAGAGAGCAGGTG...CCTGAAGGAATGGTCACCGTGGCCATTGCTGCCCACTATCTGTCTGGGGAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR CCA 90 bp GTCTTCCCCAGACAGATAGTGGGCAGCAATGGCCACGGTGACCATTCCTTCAGGCCAGATACTGGGCACTaGCATTCATGTAATAAAATC +
Preference number: 4 (lower is better)
Translates to: VFPRQIVGSNGHGDHSFRPDTGH*HSCNKI
Trigger: GATTTTATTACATGAATGCCAGTGCCCAGTATCTGG...CCTGAAGGAATGGTCACCGTGGCCATTGCTGCCCACTATCTGTCTGGGGAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR CCA 90 bp ACTGCCATGCAGAGGCCTGGAGTCCATGGGAGTAAAAGACAAAGTAGTCTCCTCATGAGGAGGATTTCTTaGAGAAACTTCTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: TAMQRPGVHGSKRQSSLLMRRIS*RNFWGR
Trigger: CCTGCCCCAGAAGTTTCTCCAAGAAATCCTCCTCAT...GAGGAGACTACTTTGTCTTTTACTCCCATGGACTCCAGGCCTCTGCATGGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR CCA 90 bp CTGCCATGCAGAGGCCTGGAGTCCATGGGAGTAAAAGACAAAGTAGTCTCCTCCAGAAACCATGTCACATaGAGTATCCACTGGGCATGT +
Preference number: 4 (lower is better)
Translates to: LPCRGLESMGVKDKVVSSRNHVT*SIHWAC
Trigger: ACATGCCCAGTGGATACTCCATGTGACATGGTTTCT...GGAGGAGACTACTTTGTCTTTTACTCCCATGGACTCCAGGCCTCTGCATGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
3UTR CAA 72 bp CTGGGGTGCCATTGCCAAGAGACCACTGAGAAAGTGTaGACCCTTTGTGGGCTCGAACATAGAAGGACATAT +
Preference number: 4 (lower is better)
Translates to: LGCHCQETTEKV*TLCGLEHRRTY
Trigger: ATATGTCCTTCTATGTTCGAGCCCACAAAGGGTCAACACTTTCTCAGTGGTCTCTTGGCAATGGCACCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487088.5
CDS-3UTR TCA 90 bp CTCACAGTGAGCTCGGATACTATCATTGATCTCAGGAATGTGAGGGGTTATGTGGCACACAGAGCTTTGTaGGCAATGGGAATGCTACCC +
Preference number: 4 (lower is better)
Translates to: LTVSSDTIIDLRNVRGYVAHRAL*AMGMLP
Trigger: GGGTAGCATTCCCATTGCTCACAAAGCTCTGTGTGC...CACATAACCCCTCACATTCCTGAGATCAATGATAGTATCCGAGCTCACTGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487088.5
CDS-3UTR TCA 90 bp TCAAGTGTCAACAGGCCATGCATCACTGCGCCACAGCTAAACCCTTATAGTGCTCTCGGATACTATCATTaGTCTCAGGAATGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: SSVNRPCITAPQLNPYSALGYYH*SQECEG
Trigger: CCCCTCACATTCCTGAGATCAATGATAGTATCCGAG...AGCACTATAAGGGTTTAGCTGTGGCGCAGTGATGCATGGCCTGTTGACACTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
CDS-3UTR TCA 90 bp CCATTGGCTCTGGAGAATCTGAGACACCTCCATCCACACCCACAGCTCAGGTTATCTGTTCTTTGGATATaGGTCGGAAATGAGGAGGAT +
Preference number: 4 (lower is better)
Translates to: PLALENLRHLHPHPQLRLSVLWI*VGNEED
Trigger: ATCCTCCTCATTTCCGACTCATATCCAAAGAACAGA...TAACCTGAGCTGTGGGTGTGGATGGAGGTGTCTCAGATTCTCCAGAGCCAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR TCA 90 bp CAGCCCTATGGCAATCACTTTCCAGTGACCTACACAGAGTTATATTCTCAAGGGCCACTGAGAAAGTGTTaGCCCTTTGTGGGCTCGAAC +
Preference number: 4 (lower is better)
Translates to: QPYGNHFPVTYTELYSQGPLRKC*PFVGSN
Trigger: GTTCGAGCCCACAAAGGGTCAACACTTTCTCAGTGG...CCCTTGAGAATATAACTCTGTGTAGGTCACTGGAAAGTGATTGCCATAGGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
CDS-3UTR TCA 90 bp CTCACAGTGAGCTCGGATACTATCATTGATCTCAGGAATGTGAGGGGTTATGTGCTCCTCCTTTACTTGTaGCTGGGGTGCCATTGCCAA +
Preference number: 4 (lower is better)
Translates to: LTVSSDTIIDLRNVRGYVLLLYL*LGCHCQ
Trigger: TTGGCAATGGCACCCCAGTCACAAGTAAAGGAGGAG...CACATAACCCCTCACATTCCTGAGATCAATGATAGTATCCGAGCTCACTGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487088.5
CDS-3UTR TCA 90 bp CCTCCATCCACACCCACAGCTCAGGTTAGTTGCAAAAGTTACACATCTTCTCTACAGCAATGGCCACGGTaGCCATTCCTTCAGGATGTT +
Preference number: 4 (lower is better)
Translates to: PPSTPTAQVSCKSYTSSLQQWPR*PFLQDV
Trigger: AACATCCTGAAGGAATGGTCACCGTGGCCATTGCTG...TAGAGAAGATGTGTAACTTTTGCAACTAACCTGAGCTGTGGGTGTGGATGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR TCA 90 bp CTGCTGGAACCAAAAAGCCATGAGAGGTACTGCTGTGATACACCTTACAAGCTAGGCAGCTCAGTGCTCTaGGGAAGGAAGTTAAGGTCA +
Preference number: 4 (lower is better)
Translates to: LLEPKSHERYCCDTPYKLGSSVL*GRKLRS
Trigger: TGACCTTAACTTCCTTCCTCAGAGCACTGAGCTGCC...TAGCTTGTAAGGTGTATCACAGCAGTACCTCTCATGGCTTTTTGGTTCCAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR TCA 90 bp CAGCCCTATGGCAATCACTTTCCAGTGACCTACACAGAGTTATATTCTCAAGGGGTCCAGGAAGAGCAATaGTTCCAGTGTGCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: QPYGNHFPVTYTELYSQGVQEEQ*FQCAVL
Trigger: CAGCACTGCACACTGGAATCATTGCTCTTCCTGGAC...CCCTTGAGAATATAACTCTGTGTAGGTCACTGGAAAGTGATTGCCATAGGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR TCA 90 bp GGAGAAACCATGTCACATGGAGTATCCACTGGGCATGTACTTAGAGCTCATCCAGACTTCCAGCATCACTaGGCAGCTAACTGCATCATC +
Preference number: 4 (lower is better)
Translates to: GETMSHGVSTGHVLRAHPDFQHH*AANCII
Trigger: GATGATGCAGTTAGCTGCTCAGTGATGCTGGAAGTC...TGGATGAGCTCTAAGTACATGCCCAGTGGATACTCCATGTGACATGGTTTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000487088.5
ENST00000489219.5
CDS-3UTR TCA 90 bp CTTGTCTTCCCCAGACAGATAGTGGGCAGCAATGGCCACGGTGACCATTCCTTCAGAAATATGACAGCATaGTGCAAGGCTTCTGAAGAT +
Preference number: 4 (lower is better)
Translates to: LVFPRQIVGSNGHGDHSFRNMTA*CKASED
Trigger: ATCTTCAGAAGCCTTGCATCATGCTGTCATATTTCT...GAAGGAATGGTCACCGTGGCCATTGCTGCCCACTATCTGTCTGGGGAAGACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR TCA 90 bp ACTGCCATGCAGAGGCCTGGAGTCCATGGGAGTAAAAGACAAAGTAGTCTCCTCCTTGGTCATGATTGTTaGGGCTGGCAAGTCCAAAAT +
Preference number: 4 (lower is better)
Translates to: TAMQRPGVHGSKRQSSLLLGHDC*GWQVQN
Trigger: ATTTTGGACTTGCCAGCCTCAACAATCATGACCAAG...GAGGAGACTACTTTGTCTTTTACTCCCATGGACTCCAGGCCTCTGCATGGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489219.5
CDS-3UTR GCA 90 bp TGGCTACATTCTTTGAGTTTAGAAAACGAGATAAAGAATTGCTCATATCTTCCCTGCTGCAGCGAGAGCTaGACCAGCGTCCGCAGCGCG +
Preference number: 4 (lower is better)
Translates to: WLHSLSLENEIKNCSYLPCCSES*TSVRSA
Trigger: CGCGCTGCGGACGCTGGTGCAGCTCTCGCTGCAGCA...GGGAAGATATGAGCAATTCTTTATCTCGTTTTCTAAACTCAAAGAATGTAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR GCA 90 bp ACTGCCATGCAGAGGCCTGGAGTCCATGGGAGTAAAAGACAAAGTAGTCTCCTCTGCTTGAAGTCCTTATaGACACAGAGCTTTGTGAGC +
Preference number: 4 (lower is better)
Translates to: TAMQRPGVHGSKRQSSLLCLKSL*TQSFVS
Trigger: GCTCACAAAGCTCTGTGTGCATAAGGACTTCAAGCA...GAGGAGACTACTTTGTCTTTTACTCCCATGGACTCCAGGCCTCTGCATGGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR GCA 90 bp AAACCATGTCACATGGAGTATCCACTGGGCATGTACTTAGAGCTCATCCACAAGGCCAGCCAAAATGGATaGCAGCACAACATCAGGTGG +
Preference number: 4 (lower is better)
Translates to: KPCHMEYPLGMYLELIHKASQNG*QHNIRW
Trigger: CCACCTGATGTTGTGCTGGCATCCATTTTGGCTGGC...CTTGTGGATGAGCTCTAAGTACATGCCCAGTGGATACTCCATGTGACATGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000489219.5
CDS-3UTR GCA 90 bp GAACTGCCATGCAGAGGCCTGGAGTCCATGGGAGTAAAAGACAAAGTAGTCTCCAAAACCACAAAGAGGTaGATTCTCCTCACAGTGAGC +
Preference number: 4 (lower is better)
Translates to: ELPCRGLESMGVKDKVVSKTTKR*ILLTVS
Trigger: GCTCACTGTGAGGAGAATGCACCTCTTTGTGGTTTT...GGAGACTACTTTGTCTTTTACTCCCATGGACTCCAGGCCTCTGCATGGCAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR GCA 90 bp CATCCACGTAACATAGGGAGAAACCATGTCACATGGAGTATCCACTGGGCATGTACTTCTATCCAGAACTaGCATGCAGAGGCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: HPRNIGRNHVTWSIHWACTSIQN*HAEAWS
Trigger: ACTCCAGGCCTCTGCATGGCAGTTCTGGATAGAAGT...ACATGCCCAGTGGATACTCCATGTGACATGGTTTCTCCCTATGTTACGTGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000487088.5
ENST00000489219.5
CDS-3UTR GCA 90 bp CCTCCATCCACACCCACAGCTCAGGTTAGTTGCAAAAGTTACACATCTTCTCTACAAAGAGATCGTAGGTaGACACCCAGGCAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: PPSTPTAQVSCKSYTSSLQRDRR*TPRQRE
Trigger: TTCCCTCTGCCTGGGTGTGCACCTACGATCTCTTTG...TAGAGAAGATGTGTAACTTTTGCAACTAACCTGAGCTGTGGGTGTGGATGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR GCA 90 bp AAACCATGTCACATGGAGTATCCACTGGGCATGTACTTAGAGCTCATCCACAAGCTACAGCCTCAAGAGTaGAATGCTTCTCTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: KPCHMEYPLGMYLELIHKLQPQE*NASLPA
Trigger: GGCTGGGAGAGAAGCATTGCACTCTTGAGGCTGTAG...CTTGTGGATGAGCTCTAAGTACATGCCCAGTGGATACTCCATGTGACATGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR GCA 90 bp TCAAGTGTCAACAGGCCATGCATCACTGCGCCACAGCTAAACCCTTATAGTGCTAAAGCAGCACAGCAGTaGATCTGTGTGTCCACTTGT +
Preference number: 4 (lower is better)
Translates to: SSVNRPCITAPQLNPYSAKAAQQ*ICVSTC
Trigger: ACAAGTGGACACACAGATGCACTGCTGTGCTGCTTT...AGCACTATAAGGGTTTAGCTGTGGCGCAGTGATGCATGGCCTGTTGACACTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR GCA 90 bp TGGGCCCAGTTAGTTTTTAGGGAGTCACAGATTAGGCAGGCAACGAGGGGCATGCGTTTTCTCCGGCAATaGATACTTACTGTGCTCTTT +
Preference number: 4 (lower is better)
Translates to: WAQLVFRESQIRQATRGMRFLRQ*ILTVLF
Trigger: AAAGAGCACAGTAAGTATGCATTGCCGGAGAAAACG...CATGCCCCTCGTTGCCTGCCTAATCTGTGACTCCCTAAAAACTAACTGGGCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR GCA 90 bp TCAAGTGTCAACAGGCCATGCATCACTGCGCCACAGCTAAACCCTTATAGTGCTGCAATGATTCCAGTGTaGAGTGCTGATGCATGTGTG +
Preference number: 4 (lower is better)
Translates to: SSVNRPCITAPQLNPYSAAMIPV*SADACV
Trigger: CACACATGCATCAGCACTGCACACTGGAATCATTGC...AGCACTATAAGGGTTTAGCTGTGGCGCAGTGATGCATGGCCTGTTGACACTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR CCA 90 bp TGCCATTACGCAGGATCTGAACCACCTACACGTACAGTGGTCTCATTCCAGTATGTTCAAGATAATCCCTaGCTTGGAGCGCGTCGAACT +
Preference number: 4 (lower is better)
Translates to: CHYAGSEPPTRTVVSFQYVQDNP*LGARRT
Trigger: AGTTCGACGCGCTCCAAGCCAGGGATTATCTTGAAC...ATACTGGAATGAGACCACTGTACGTGTAGGTGGTTCAGATCCTGCGTAATGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR CCA 90 bp AAACCATGTCACATGGAGTATCCACTGGGCATGTACTTAGAGCTCATCCACAAGGCTGGGCTCCATCTCTaGGTTCCAGCTTTACCACAA +
Preference number: 4 (lower is better)
Translates to: KPCHMEYPLGMYLELIHKAGLHL*VPALPQ
Trigger: TTGTGGTAAAGCTGGAACCCAGAGATGGAGCCCAGC...CTTGTGGATGAGCTCTAAGTACATGCCCAGTGGATACTCCATGTGACATGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000487088.5
ENST00000489219.5
CDS-3UTR CCA 90 bp ACTGCCATGCAGAGGCCTGGAGTCCATGGGAGTAAAAGACAAAGTAGTCTCCTCCAGCACAACATCAGGTaGGATTTCAGAACCACTTCT +
Preference number: 4 (lower is better)
Translates to: TAMQRPGVHGSKRQSSLLQHNIR*DFRTTS
Trigger: AGAAGTGGTTCTGAAATCCCACCTGATGTTGTGCTG...GAGGAGACTACTTTGTCTTTTACTCCCATGGACTCCAGGCCTCTGCATGGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489219.5
CDS-3UTR CCA 90 bp CCATTGGCTCTGGAGAATCTGAGACACCTCCATCCACACCCACAGCTCAGGTTAACTAAGTATGCCATCTaGTCCCTGTTACAAACATCC +
Preference number: 4 (lower is better)
Translates to: PLALENLRHLHPHPQLRLTKYAI*SLLQTS
Trigger: GGATGTTTGTAACAGGGACCAGATGGCATACTTAGT...TAACCTGAGCTGTGGGTGTGGATGGAGGTGTCTCAGATTCTCCAGAGCCAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR TCA 90 bp TGGGCCCAGTTAGTTTTTAGGGAGTCACAGATTAGGCAGGCAACGAGGGGCATGTCTACTGAAATCTTATaGAGGCTGTTGCTTTGCACT +
Preference number: 4 (lower is better)
Translates to: WAQLVFRESQIRQATRGMSTEIL*RLLLCT
Trigger: AGTGCAAAGCAACAGCCTTCATAAGATTTCAGTAGA...CATGCCCCTCGTTGCCTGCCTAATCTGTGACTCCCTAAAAACTAACTGGGCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR TCA 90 bp GAACTGCCATGCAGAGGCCTGGAGTCCATGGGAGTAAAAGACAAAGTAGTCTCCACGAAAGTCAGTATCTaGAGGAATGATTCCACTCTG +
Preference number: 4 (lower is better)
Translates to: ELPCRGLESMGVKDKVVSTKVSI*RNDSTL
Trigger: CAGAGTGGAATCATTCCTTCAGATACTGACTTTCGT...GGAGACTACTTTGTCTTTTACTCCCATGGACTCCAGGCCTCTGCATGGCAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR TCA 90 bp TGGGCCCAGTTAGTTTTTAGGGAGTCACAGATTAGGCAGGCAACGAGGGGCATGTTGTCACCTGCTCTCTaGATGGAATCTGTTAGAATT +
Preference number: 4 (lower is better)
Translates to: WAQLVFRESQIRQATRGMLSPAL*MESVRI
Trigger: AATTCTAACAGATTCCATTCAGAGAGCAGGTGACAA...CATGCCCCTCGTTGCCTGCCTAATCTGTGACTCCCTAAAAACTAACTGGGCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR TCA 90 bp ACTGCCATGCAGAGGCCTGGAGTCCATGGGAGTAAAAGACAAAGTAGTCTCCTCCATGTAGTTTATGATTaGGCCAATACGAGAGGGGTA +
Preference number: 4 (lower is better)
Translates to: TAMQRPGVHGSKRQSSLLHVVYD*ANTRGV
Trigger: TACCCCTCTCGTATTGGCTCAATCATAAACTACATG...GAGGAGACTACTTTGTCTTTTACTCCCATGGACTCCAGGCCTCTGCATGGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR TCA 90 bp AAATGTCCAATCTGGGAACTTTTCCTTCAGAGCATCCAGTTGAGGGGATCTCTTGGGCACCATGCTGCTTaGAGTCCTTATGCACACAGA +
Preference number: 4 (lower is better)
Translates to: KCPIWELFLQSIQLRGSLGHHAA*SPYAHR
Trigger: TCTGTGTGCATAAGGACTTCAAGCAGCATGGTGCCC...AAGAGATCCCCTCAACTGGATGCTCTGAAGGAAAAGTTCCCAGATTGGACATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489219.5
CDS-3UTR TCA 90 bp CTGCCATGCAGAGGCCTGGAGTCCATGGGAGTAAAAGACAAAGTAGTCTCCTCCCAAATACTGCCCAGATaGGGTACAATGCATAAAGAT +
Preference number: 4 (lower is better)
Translates to: LPCRGLESMGVKDKVVSSQILPR*GTMHKD
Trigger: ATCTTTATGCATTGTACCTCATCTGGGCAGTATTTG...GGAGGAGACTACTTTGTCTTTTACTCCCATGGACTCCAGGCCTCTGCATGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489219.5
CDS-3UTR TCA 90 bp GAACTGCCATGCAGAGGCCTGGAGTCCATGGGAGTAAAAGACAAAGTAGTCTCCGTTCTAGTCATATGCTaGAGAAACACTCTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: ELPCRGLESMGVKDKVVSVLVIC*RNTLFG
Trigger: GCCAAAGAGAGTGTTTCTTCAGCATATGACTAGAAC...GGAGACTACTTTGTCTTTTACTCCCATGGACTCCAGGCCTCTGCATGGCAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR TCA 90 bp TGGGCCCAGTTAGTTTTTAGGGAGTCACAGATTAGGCAGGCAACGAGGGGCATGTATAATCAAACCCATTaGTCCATATTCCAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: WAQLVFRESQIRQATRGMYNQTH*SIFQSP
Trigger: GGGACTCTGGAATATGGATCAATGGGTTTGATTATA...CATGCCCCTCGTTGCCTGCCTAATCTGTGACTCCCTAAAAACTAACTGGGCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR TCA 90 bp TGCCATTACGCAGGATCTGAACCACCTACACGTACAGTGGTCTCATTCCAGTATGCATTCTCCTCACAGTaGGCTCGGATACTATCATTG +
Preference number: 4 (lower is better)
Translates to: CHYAGSEPPTRTVVSFQYAFSSQ*ARILSL
Trigger: CAATGATAGTATCCGAGCTCACTGTGAGGAGAATGC...ATACTGGAATGAGACCACTGTACGTGTAGGTGGTTCAGATCCTGCGTAATGGCA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR TCA 90 bp ACTGCCATGCAGAGGCCTGGAGTCCATGGGAGTAAAAGACAAAGTAGTCTCCTCGATATGAGTCGGAAATaGGGAGGATTTCTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: TAMQRPGVHGSKRQSSLLDMSRK*GGFLGE
Trigger: TTCTCCAAGAAATCCTCCTCATTTCCGACTCATATC...GAGGAGACTACTTTGTCTTTTACTCCCATGGACTCCAGGCCTCTGCATGGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR TCA 90 bp GCACACCCAGGCAGAGGGAAATGTCCAATCTGGGAACTTTTCCTTCAGAGCATCTTCAGGATGTTCTTCTaGAACCTGCACTTCTATCCA +
Preference number: 4 (lower is better)
Translates to: AHPGRGKCPIWELFLQSIFRMFF*NLHFYP
Trigger: TGGATAGAAGTGCAGGTTTCAGAAGAACATCCTGAA...GATGCTCTGAAGGAAAAGTTCCCAGATTGGACATTTCCCTCTGCCTGGGTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR TCA 90 bp AAATGTCCAATCTGGGAACTTTTCCTTCAGAGCATCCAGTTGAGGGGATCTCTTCAGCAATGGCCACGGTaGCCATTCCTTCAGGATGTT +
Preference number: 4 (lower is better)
Translates to: KCPIWELFLQSIQLRGSLQQWPR*PFLQDV
Trigger: AACATCCTGAAGGAATGGTCACCGTGGCCATTGCTG...AAGAGATCCCCTCAACTGGATGCTCTGAAGGAAAAGTTCCCAGATTGGACATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR TCA 90 bp ACCCAGGCAGAGGGAAATGTCCAATCTGGGAACTTTTCCTTCAGAGCATCCAGTTATAGTGCTTGGCCCTaGAAAGCGTTAACCCAGAAA +
Preference number: 4 (lower is better)
Translates to: TQAEGNVQSGNFSFRASSYSAWP*KALTQK
Trigger: TTTCTGGGTTAACGCTTTTCAGGGCCAAGCACTATA...ACTGGATGCTCTGAAGGAAAAGTTCCCAGATTGGACATTTCCCTCTGCCTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489219.5
CDS-3UTR TCA 90 bp CAGCCCTATGGCAATCACTTTCCAGTGACCTACACAGAGTTATATTCTCAAGGGAGTACCCACATGTGCTaGAGTGCCAAAAGACTGGCA +
Preference number: 4 (lower is better)
Translates to: QPYGNHFPVTYTELYSQGSTHMC*SAKRLA
Trigger: TGCCAGTCTTTTGGCACTTCAGCACATGTGGGTACT...CCCTTGAGAATATAACTCTGTGTAGGTCACTGGAAAGTGATTGCCATAGGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
CDS-3UTR TCA 90 bp CTTGTCTTCCCCAGACAGATAGTGGGCAGCAATGGCCACGGTGACCATTCCTTCTCATTAACAATGCTCTaGCAGTGTACATCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: LVFPRQIVGSNGHGDHSFSLTML*QCTSFL
Trigger: CAAGAAAGATGTACACTGTCAGAGCATTGTTAATGA...GAAGGAATGGTCACCGTGGCCATTGCTGCCCACTATCTGTCTGGGGAAGACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489219.5
CDS-3UTR TCA 90 bp AAACCATGTCACATGGAGTATCCACTGGGCATGTACTTAGAGCTCATCCACAAGCCTGAAGAAACAGCTTaGCACAGGCTACAGCCTCAA +
Preference number: 4 (lower is better)
Translates to: KPCHMEYPLGMYLELIHKPEETA*HRLQPQ
Trigger: TTGAGGCTGTAGCCTGTGTCAAGCTGTTTCTTCAGG...CTTGTGGATGAGCTCTAAGTACATGCCCAGTGGATACTCCATGTGACATGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR TCA 90 bp TACGCAGGATCTGAACCACCTACACGTACAGTGGTCTCATTCCAGTATAAGCCATGCACAGTTTACCATTaGTCTCACCAATGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: YAGSEPPTRTVVSFQYKPCTVYH*SHQCPH
Trigger: GTGAGGGCATTGGTGAGATCAATGGTAAACTGTGCA...TGGCTTATACTGGAATGAGACCACTGTACGTGTAGGTGGTTCAGATCCTGCGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR TCA 90 bp AAACCATGTCACATGGAGTATCCACTGGGCATGTACTTAGAGCTCATCCACAAGGACTTCCAGCATCACTaGGCAGCTAACTGCATCATC +
Preference number: 4 (lower is better)
Translates to: KPCHMEYPLGMYLELIHKDFQHH*AANCII
Trigger: GATGATGCAGTTAGCTGCTCAGTGATGCTGGAAGTC...CTTGTGGATGAGCTCTAAGTACATGCCCAGTGGATACTCCATGTGACATGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000487088.5
ENST00000489219.5
CDS-3UTR GCA 90 bp TGCCATTACGCAGGATCTGAACCACCTACACGTACAGTGGTCTCATTCCAGTATGCACATTTGAGAGGCTaGCTGAAGAAACAGCTTGAC +
Preference number: 4 (lower is better)
Translates to: CHYAGSEPPTRTVVSFQYAHLRG*LKKQLD
Trigger: GTCAAGCTGTTTCTTCAGGCAGCCTCTCAAATGTGC...ATACTGGAATGAGACCACTGTACGTGTAGGTGGTTCAGATCCTGCGTAATGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR GCA 90 bp CGATTTCTTAAAGCCATTGGCTCTGGAGAATCTGAGACACCTCCATCCACACCCCACCAGAAGAGTACTTaGCTCGCTTTTCCTTGTATG +
Preference number: 4 (lower is better)
Translates to: RFLKAIGSGESETPPSTPHQKST*LAFPCM
Trigger: CATACAAGGAAAAGCGAGGCAAGTACTCTTCTGGTG...GGGTGTGGATGGAGGTGTCTCAGATTCTCCAGAGCCAATGGCTTTAAGAAATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR CCA 90 bp AAACCATGTCACATGGAGTATCCACTGGGCATGTACTTAGAGCTCATCCACAAGGTTCAAGATAATCCCTaGCTTGGAGCGCGTCGAACT +
Preference number: 4 (lower is better)
Translates to: KPCHMEYPLGMYLELIHKVQDNP*LGARRT
Trigger: AGTTCGACGCGCTCCAAGCCAGGGATTATCTTGAAC...CTTGTGGATGAGCTCTAAGTACATGCCCAGTGGATACTCCATGTGACATGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000489219.5
CDS-3UTR CCA 90 bp GGAGAAACCATGTCACATGGAGTATCCACTGGGCATGTACTTAGAGCTCATCCATACAGCCAGCCAAAATaGATGCCAGCACAACATCAG +
Preference number: 4 (lower is better)
Translates to: GETMSHGVSTGHVLRAHPYSQPK*MPAQHQ
Trigger: CTGATGTTGTGCTGGCATCCATTTTGGCTGGCTGTA...TGGATGAGCTCTAAGTACATGCCCAGTGGATACTCCATGTGACATGGTTTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000489219.5
CDS-3UTR CCA 90 bp TGCCATTACGCAGGATCTGAACCACCTACACGTACAGTGGTCTCATTCCAGTATTCCTTTACTTGTGACTaGGGTGCCATTGCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: CHYAGSEPPTRTVVSFQYSFTCD*GAIAKR
Trigger: TCTCTTGGCAATGGCACCCCAGTCACAAGTAAAGGA...ATACTGGAATGAGACCACTGTACGTGTAGGTGGTTCAGATCCTGCGTAATGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR CCA 90 bp CATCCACGTAACATAGGGAGAAACCATGTCACATGGAGTATCCACTGGGCATGTTCCTTTACTTGTGACTaGGGTGCCATTGCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: HPRNIGRNHVTWSIHWACSFTCD*GAIAKR
Trigger: TCTCTTGGCAATGGCACCCCAGTCACAAGTAAAGGA...ACATGCCCAGTGGATACTCCATGTGACATGGTTTCTCCCTATGTTACGTGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000487088.5
ENST00000489219.5
CDS-3UTR CCA 90 bp ACCCAGGCAGAGGGAAATGTCCAATCTGGGAACTTTTCCTTCAGAGCATCCAGTGGGAAATGTCCAATCTaGGAACTTTTCCTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: TQAEGNVQSGNFSFRASSGKCPI*ELFLQS
Trigger: GCTCTGAAGGAAAAGTTCCCAGATTGGACATTTCCC...ACTGGATGCTCTGAAGGAAAAGTTCCCAGATTGGACATTTCCCTCTGCCTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR CCA 90 bp TCAAGTGTCAACAGGCCATGCATCACTGCGCCACAGCTAAACCCTTATAGTGCTAGAAACCATGTCACATaGAGTATCCACTGGGCATGT +
Preference number: 4 (lower is better)
Translates to: SSVNRPCITAPQLNPYSARNHVT*SIHWAC
Trigger: ACATGCCCAGTGGATACTCCATGTGACATGGTTTCT...AGCACTATAAGGGTTTAGCTGTGGCGCAGTGATGCATGGCCTGTTGACACTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
CDS-3UTR CCA 90 bp TACGCAGGATCTGAACCACCTACACGTACAGTGGTCTCATTCCAGTATAAGCCACAATGCCCTCACTGCTaGAACCAAAAAGCCATGAGA +
Preference number: 4 (lower is better)
Translates to: YAGSEPPTRTVVSFQYKPQCPHC*NQKAMR
Trigger: TCTCATGGCTTTTTGGTTCCAGCAGTGAGGGCATTG...TGGCTTATACTGGAATGAGACCACTGTACGTGTAGGTGGTTCAGATCCTGCGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR CCA 90 bp CATCCACGTAACATAGGGAGAAACCATGTCACATGGAGTATCCACTGGGCATGTCTAGAACAAGGCAAGTaGGACCTTTGTCGACACATG +
Preference number: 4 (lower is better)
Translates to: HPRNIGRNHVTWSIHWACLEQGK*DLCRHM
Trigger: CATGTGTCGACAAAGGTCCCACTTGCCTTGTTCTAG...ACATGCCCAGTGGATACTCCATGTGACATGGTTTCTCCCTATGTTACGTGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR TCA 90 bp GAACTGCCATGCAGAGGCCTGGAGTCCATGGGAGTAAAAGACAAAGTAGTCTCCTCTACTGAAATCTTATaGAGGCTGTTGCTTTGCACT +
Preference number: 4 (lower is better)
Translates to: ELPCRGLESMGVKDKVVSSTEIL*RLLLCT
Trigger: AGTGCAAAGCAACAGCCTTCATAAGATTTCAGTAGA...GGAGACTACTTTGTCTTTTACTCCCATGGACTCCAGGCCTCTGCATGGCAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR TCA 90 bp CCATTGGCTCTGGAGAATCTGAGACACCTCCATCCACACCCACAGCTCAGGTTATTACCACAACATTGGTaGTGTTGTCATAATAGCTTG +
Preference number: 4 (lower is better)
Translates to: PLALENLRHLHPHPQLRLLPQHW*CCHNSL
Trigger: CAAGCTATTATGACAACATCACCAATGTTGTGGTAA...TAACCTGAGCTGTGGGTGTGGATGGAGGTGTCTCAGATTCTCCAGAGCCAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR TCA 90 bp CATCCACGTAACATAGGGAGAAACCATGTCACATGGAGTATCCACTGGGCATGTCCACCATGTAGTTTATaGTTGAGCCAATACGAGAGG +
Preference number: 4 (lower is better)
Translates to: HPRNIGRNHVTWSIHWACPPCSL*LSQYER
Trigger: CCTCTCGTATTGGCTCAATCATAAACTACATGGTGG...ACATGCCCAGTGGATACTCCATGTGACATGGTTTCTCCCTATGTTACGTGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000487088.5
ENST00000489219.5
CDS-3UTR TCA 90 bp CGATTTCTTAAAGCCATTGGCTCTGGAGAATCTGAGACACCTCCATCCACACCCGTTCTAGTCATATGCTaGAGAAACACTCTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: RFLKAIGSGESETPPSTPVLVIC*RNTLFG
Trigger: GCCAAAGAGAGTGTTTCTTCAGCATATGACTAGAAC...GGGTGTGGATGGAGGTGTCTCAGATTCTCCAGAGCCAATGGCTTTAAGAAATCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR TCA 90 bp AAACCATGTCACATGGAGTATCCACTGGGCATGTACTTAGAGCTCATCCACAAGCTCGGATACTATCATTaGTCTCAGGAATGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: KPCHMEYPLGMYLELIHKLGYYH*SQECEG
Trigger: CCCCTCACATTCCTGAGATCAATGATAGTATCCGAG...CTTGTGGATGAGCTCTAAGTACATGCCCAGTGGATACTCCATGTGACATGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000487088.5
ENST00000489219.5
CDS-3UTR GCA 90 bp CCATTGGCTCTGGAGAATCTGAGACACCTCCATCCACACCCACAGCTCAGGTTATATTTTGGCTACAGTTaGAGTTCCATACAGACAAAC +
Preference number: 4 (lower is better)
Translates to: PLALENLRHLHPHPQLRLYFGYS*SSIQTN
Trigger: GTTTGTCTGTATGGAACTGCAACTGTAGCCAAAATA...TAACCTGAGCTGTGGGTGTGGATGGAGGTGTCTCAGATTCTCCAGAGCCAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR GCA 90 bp GGAGAAACCATGTCACATGGAGTATCCACTGGGCATGTACTTAGAGCTCATCCATGTGAGCAATGGGAATaGTACCCAGACAGCACTAAT +
Preference number: 4 (lower is better)
Translates to: GETMSHGVSTGHVLRAHPCEQWE*YPDSTN
Trigger: ATTAGTGCTGTCTGGGTAGCATTCCCATTGCTCACA...TGGATGAGCTCTAAGTACATGCCCAGTGGATACTCCATGTGACATGGTTTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000487088.5
ENST00000489219.5
CDS-3UTR GCA 90 bp CATCCACGTAACATAGGGAGAAACCATGTCACATGGAGTATCCACTGGGCATGTTGCTTGAAGTCCTTATaGACACAGAGCTTTGTGAGC +
Preference number: 4 (lower is better)
Translates to: HPRNIGRNHVTWSIHWACCLKSL*TQSFVS
Trigger: GCTCACAAAGCTCTGTGTGCATAAGGACTTCAAGCA...ACATGCCCAGTGGATACTCCATGTGACATGGTTTCTCCCTATGTTACGTGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000487088.5
ENST00000489219.5
CDS-3UTR GCA 90 bp CAGCCCTATGGCAATCACTTTCCAGTGACCTACACAGAGTTATATTCTCAAGGGTTTCCTTGGGCACCATaGTGCTTGAAGTCCTTATGC +
Preference number: 4 (lower is better)
Translates to: QPYGNHFPVTYTELYSQGFPWAP*CLKSLC
Trigger: GCATAAGGACTTCAAGCAGCATGGTGCCCAAGGAAA...CCCTTGAGAATATAACTCTGTGTAGGTCACTGGAAAGTGATTGCCATAGGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
CDS-3UTR GCA 90 bp CCTCCATCCACACCCACAGCTCAGGTTAGTTGCAAAAGTTACACATCTTCTCTATTTCCTTGGGCACCATaGTGCTTGAAGTCCTTATGC +
Preference number: 4 (lower is better)
Translates to: PPSTPTAQVSCKSYTSSLFPWAP*CLKSLC
Trigger: GCATAAGGACTTCAAGCAGCATGGTGCCCAAGGAAA...TAGAGAAGATGTGTAACTTTTGCAACTAACCTGAGCTGTGGGTGTGGATGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR GCA 90 bp CATCCACGTAACATAGGGAGAAACCATGTCACATGGAGTATCCACTGGGCATGTAAAACCACAAAGAGGTaGATTCTCCTCACAGTGAGC +
Preference number: 4 (lower is better)
Translates to: HPRNIGRNHVTWSIHWACKTTKR*ILLTVS
Trigger: GCTCACTGTGAGGAGAATGCACCTCTTTGTGGTTTT...ACATGCCCAGTGGATACTCCATGTGACATGGTTTCTCCCTATGTTACGTGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000487088.5
ENST00000489219.5
CDS-3UTR GCA 90 bp TCAAGTGTCAACAGGCCATGCATCACTGCGCCACAGCTAAACCCTTATAGTGCTTTCCTGATCAGAAAGTaGACTGGAAGATACCAAGGA +
Preference number: 4 (lower is better)
Translates to: SSVNRPCITAPQLNPYSAFLIRK*TGRYQG
Trigger: TCCTTGGTATCTTCCAGTGCACTTTCTGATCAGGAA...AGCACTATAAGGGTTTAGCTGTGGCGCAGTGATGCATGGCCTGTTGACACTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
CDS-3UTR GCA 90 bp AAGGAAAACCACAAAGAGGTGCATTCTCCTCACAGTGAGCTCGGATACTATCATACTTCTATCCAGAACTaGCATGCAGAGGCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: KENHKEVHSPHSELGYYHTSIQN*HAEAWS
Trigger: ACTCCAGGCCTCTGCATGGCAGTTCTGGATAGAAGT...ATGATAGTATCCGAGCTCACTGTGAGGAGAATGCACCTCTTTGTGGTTTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487088.5
CDS-3UTR GCA 90 bp CATCCACGTAACATAGGGAGAAACCATGTCACATGGAGTATCCACTGGGCATGTAGCCATGAGAGGTACTaGTGTGATACACCTTACAAG +
Preference number: 4 (lower is better)
Translates to: HPRNIGRNHVTWSIHWACSHERY*CDTPYK
Trigger: CTTGTAAGGTGTATCACAGCAGTACCTCTCATGGCT...ACATGCCCAGTGGATACTCCATGTGACATGGTTTCTCCCTATGTTACGTGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR CCA 90 bp TCTCTAATGGTACTGCATATGGTGTGTAATCCTAGGAACCCAGTTCAAGTGGTGGTTCAAGATAATCCCTaGCTTGGAGCGCGTCGAACT +
Preference number: 4 (lower is better)
Translates to: SLMVLHMVCNPRNPVQVVVQDNP*LGARRT
Trigger: AGTTCGACGCGCTCCAAGCCAGGGATTATCTTGAAC...CACCACTTGAACTGGGTTCCTAGGATTACACACCATATGCAGTACCATTAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR CCA 90 bp ACTGCCATGCAGAGGCCTGGAGTCCATGGGAGTAAAAGACAAAGTAGTCTCCTCCCGCTGTGTCATACTTaGTGTGATAAATGTATCCAT +
Preference number: 4 (lower is better)
Translates to: TAMQRPGVHGSKRQSSLLPLCHT*CDKCIH
Trigger: ATGGATACATTTATCACACCAAGTATGACACAGCGG...GAGGAGACTACTTTGTCTTTTACTCCCATGGACTCCAGGCCTCTGCATGGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR CCA 90 bp TGCCATTACGCAGGATCTGAACCACCTACACGTACAGTGGTCTCATTCCAGTATCAGCACAACATCAGGTaGGATTTCAGAACCACTTCT +
Preference number: 4 (lower is better)
Translates to: CHYAGSEPPTRTVVSFQYQHNIR*DFRTTS
Trigger: AGAAGTGGTTCTGAAATCCCACCTGATGTTGTGCTG...ATACTGGAATGAGACCACTGTACGTGTAGGTGGTTCAGATCCTGCGTAATGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR CCA 90 bp CATCCACGTAACATAGGGAGAAACCATGTCACATGGAGTATCCACTGGGCATGTTCTTGGAGAAACTTCTaGGGCAGGAAGATACCAGTT +
Preference number: 4 (lower is better)
Translates to: HPRNIGRNHVTWSIHWACSWRNF*GRKIPV
Trigger: AACTGGTATCTTCCTGCCCCAGAAGTTTCTCCAAGA...ACATGCCCAGTGGATACTCCATGTGACATGGTTTCTCCCTATGTTACGTGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000487088.5
ENST00000489219.5
CDS-3UTR CCA 90 bp CAGCCCTATGGCAATCACTTTCCAGTGACCTACACAGAGTTATATTCTCAAGGGATGAGGAGGATTTCTTaGAGAAACTTCTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: QPYGNHFPVTYTELYSQGMRRIS*RNFWGR
Trigger: CCTGCCCCAGAAGTTTCTCCAAGAAATCCTCCTCAT...CCCTTGAGAATATAACTCTGTGTAGGTCACTGGAAAGTGATTGCCATAGGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
CDS-3UTR CCA 90 bp ATGGAAGTCCCTGCAGTAAGTAGGCAACATGCTACCCTTCTATTCAACACAGCAATGAGGAGGATTTCTTaGAGAAACTTCTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: MEVPAVSRQHATLLFNTAMRRIS*RNFWGR
Trigger: CCTGCCCCAGAAGTTTCTCCAAGAAATCCTCCTCAT...TGCTGTGTTGAATAGAAGGGTAGCATGTTGCCTACTTACTGCAGGGACTTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR CCA 90 bp AAACCATGTCACATGGAGTATCCACTGGGCATGTACTTAGAGCTCATCCACAAGATGAGGAGGATTTCTTaGAGAAACTTCTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: KPCHMEYPLGMYLELIHKMRRIS*RNFWGR
Trigger: CCTGCCCCAGAAGTTTCTCCAAGAAATCCTCCTCAT...CTTGTGGATGAGCTCTAAGTACATGCCCAGTGGATACTCCATGTGACATGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000487088.5
ENST00000489219.5
CDS-3UTR TCA 90 bp ACCCAGGCAGAGGGAAATGTCCAATCTGGGAACTTTTCCTTCAGAGCATCCAGTTCTACTGAAATCTTATaGAGGCTGTTGCTTTGCACT +
Preference number: 4 (lower is better)
Translates to: TQAEGNVQSGNFSFRASSSTEIL*RLLLCT
Trigger: AGTGCAAAGCAACAGCCTTCATAAGATTTCAGTAGA...ACTGGATGCTCTGAAGGAAAAGTTCCCAGATTGGACATTTCCCTCTGCCTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR TCA 90 bp TGCCATTACGCAGGATCTGAACCACCTACACGTACAGTGGTCTCATTCCAGTATAGGGTGTTTAGCTGCTaGAACATAAGCTTGAACCAA +
Preference number: 4 (lower is better)
Translates to: CHYAGSEPPTRTVVSFQYRVFSC*NISLNQ
Trigger: TTGGTTCAAGCTTATGTTTCAGCAGCTAAACACCCT...ATACTGGAATGAGACCACTGTACGTGTAGGTGGTTCAGATCCTGCGTAATGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR TCA 90 bp ACCCAGGCAGAGGGAAATGTCCAATCTGGGAACTTTTCCTTCAGAGCATCCAGTTTGTCACCTGCTCTCTaGATGGAATCTGTTAGAATT +
Preference number: 4 (lower is better)
Translates to: TQAEGNVQSGNFSFRASSLSPAL*MESVRI
Trigger: AATTCTAACAGATTCCATTCAGAGAGCAGGTGACAA...ACTGGATGCTCTGAAGGAAAAGTTCCCAGATTGGACATTTCCCTCTGCCTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR TCA 90 bp AAACCATGTCACATGGAGTATCCACTGGGCATGTACTTAGAGCTCATCCACAAGCCACCATGTAGTTTATaGTTGAGCCAATACGAGAGG +
Preference number: 4 (lower is better)
Translates to: KPCHMEYPLGMYLELIHKPPCSL*LSQYER
Trigger: CCTCTCGTATTGGCTCAATCATAAACTACATGGTGG...CTTGTGGATGAGCTCTAAGTACATGCCCAGTGGATACTCCATGTGACATGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000487088.5
ENST00000489219.5
CDS-3UTR TCA 90 bp CCACTGGGCATGTACTTAGAGCTCATCCACAAGATTAAAATACAAAGAGATCGTGCACACAGAGCTTTGTaGGCAATGGGAATGCTACCC +
Preference number: 4 (lower is better)
Translates to: PLGMYLELIHKIKIQRDRAHRAL*AMGMLP
Trigger: GGGTAGCATTCCCATTGCTCACAAAGCTCTGTGTGC...ACGATCTCTTTGTATTTTAATCTTGTGGATGAGCTCTAAGTACATGCCCAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR TCA 90 bp TGCCATTACGCAGGATCTGAACCACCTACACGTACAGTGGTCTCATTCCAGTATGTTCTAGTCATATGCTaGAGAAACACTCTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: CHYAGSEPPTRTVVSFQYVLVIC*RNTLFG
Trigger: GCCAAAGAGAGTGTTTCTTCAGCATATGACTAGAAC...ATACTGGAATGAGACCACTGTACGTGTAGGTGGTTCAGATCCTGCGTAATGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR TCA 90 bp CGATTTCTTAAAGCCATTGGCTCTGGAGAATCTGAGACACCTCCATCCACACCCTATAATCAAACCCATTaGTCCATATTCCAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: RFLKAIGSGESETPPSTPYNQTH*SIFQSP
Trigger: GGGACTCTGGAATATGGATCAATGGGTTTGATTATA...GGGTGTGGATGGAGGTGTCTCAGATTCTCCAGAGCCAATGGCTTTAAGAAATCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR TCA 90 bp AAATGTCCAATCTGGGAACTTTTCCTTCAGAGCATCCAGTTGAGGGGATCTCTTGCATTCTCCTCACAGTaGGCTCGGATACTATCATTG +
Preference number: 4 (lower is better)
Translates to: KCPIWELFLQSIQLRGSLAFSSQ*ARILSL
Trigger: CAATGATAGTATCCGAGCTCACTGTGAGGAGAATGC...AAGAGATCCCCTCAACTGGATGCTCTGAAGGAAAAGTTCCCAGATTGGACATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR TCA 90 bp TGCCATTACGCAGGATCTGAACCACCTACACGTACAGTGGTCTCATTCCAGTATGATACCAGTTTTTCCTaGTCAGAAAGTGCACTGGAA +
Preference number: 4 (lower is better)
Translates to: CHYAGSEPPTRTVVSFQYDTSFS*SESALE
Trigger: TTCCAGTGCACTTTCTGATCAGGAAAAACTGGTATC...ATACTGGAATGAGACCACTGTACGTGTAGGTGGTTCAGATCCTGCGTAATGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR TCA 90 bp TTGACCCTTTGTGGGCTCGAACATAGAAGGACATATGGCTTGGTCCTGTTGCTTGATACCAGTTTTTCCTaGTCAGAAAGTGCACTGGAA +
Preference number: 4 (lower is better)
Translates to: LTLCGLEHRRTYGLVLLLDTSFS*SESALE
Trigger: TTCCAGTGCACTTTCTGATCAGGAAAAACTGGTATC...AAGCAACAGGACCAAGCCATATGTCCTTCTATGTTCGAGCCCACAAAGGGTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487088.5
CDS-3UTR TCA 90 bp CATCCACGTAACATAGGGAGAAACCATGTCACATGGAGTATCCACTGGGCATGTGATATGAGTCGGAAATaGGGAGGATTTCTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: HPRNIGRNHVTWSIHWACDMSRK*GGFLGE
Trigger: TTCTCCAAGAAATCCTCCTCATTTCCGACTCATATC...ACATGCCCAGTGGATACTCCATGTGACATGGTTTCTCCCTATGTTACGTGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000487088.5
ENST00000489219.5
CDS-3UTR TCA 90 bp GGAGAAACCATGTCACATGGAGTATCCACTGGGCATGTACTTAGAGCTCATCCAGATATGAGTCGGAAATaGGGAGGATTTCTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: GETMSHGVSTGHVLRAHPDMSRK*GGFLGE
Trigger: TTCTCCAAGAAATCCTCCTCATTTCCGACTCATATC...TGGATGAGCTCTAAGTACATGCCCAGTGGATACTCCATGTGACATGGTTTCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000487088.5
ENST00000489219.5
CDS-3UTR TCA 90 bp TGCCATTACGCAGGATCTGAACCACCTACACGTACAGTGGTCTCATTCCAGTATTCTGTTCTTTGGATATaGGTCGGAAATGAGGAGGAT +
Preference number: 4 (lower is better)
Translates to: CHYAGSEPPTRTVVSFQYSVLWI*VGNEED
Trigger: ATCCTCCTCATTTCCGACTCATATCCAAAGAACAGA...ATACTGGAATGAGACCACTGTACGTGTAGGTGGTTCAGATCCTGCGTAATGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR TCA 90 bp CATCCACGTAACATAGGGAGAAACCATGTCACATGGAGTATCCACTGGGCATGTTCTGTTCTTTGGATATaGGTCGGAAATGAGGAGGAT +
Preference number: 4 (lower is better)
Translates to: HPRNIGRNHVTWSIHWACSVLWI*VGNEED
Trigger: ATCCTCCTCATTTCCGACTCATATCCAAAGAACAGA...ACATGCCCAGTGGATACTCCATGTGACATGGTTTCTCCCTATGTTACGTGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000487088.5
ENST00000489219.5
CDS-3UTR TCA 90 bp TCAAGTGTCAACAGGCCATGCATCACTGCGCCACAGCTAAACCCTTATAGTGCTCATTACCTCAGTGAATaGTATTTTACCCACCATCCA +
Preference number: 4 (lower is better)
Translates to: SSVNRPCITAPQLNPYSAHYLSE*YFTHHP
Trigger: TGGATGGTGGGTAAAATATCATTCACTGAGGTAATG...AGCACTATAAGGGTTTAGCTGTGGCGCAGTGATGCATGGCCTGTTGACACTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
CDS-3UTR TCA 90 bp TACGCAGGATCTGAACCACCTACACGTACAGTGGTCTCATTCCAGTATAAGCCACCAGTGACAAGAAATTaGCAAACACTCCTTCTACAG +
Preference number: 4 (lower is better)
Translates to: YAGSEPPTRTVVSFQYKPPVTRN*QTLLLQ
Trigger: CTGTAGAAGGAGTGTTTGTCAATTTCTTGTCACTGG...TGGCTTATACTGGAATGAGACCACTGTACGTGTAGGTGGTTCAGATCCTGCGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR TCA 90 bp ACCCAGGCAGAGGGAAATGTCCAATCTGGGAACTTTTCCTTCAGAGCATCCAGTAGAAATATGACAGCATaGTGCAAGGCTTCTGAAGAT +
Preference number: 4 (lower is better)
Translates to: TQAEGNVQSGNFSFRASSRNMTA*CKASED
Trigger: ATCTTCAGAAGCCTTGCATCATGCTGTCATATTTCT...ACTGGATGCTCTGAAGGAAAAGTTCCCAGATTGGACATTTCCCTCTGCCTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR TCA 90 bp CCACTGGGCATGTACTTAGAGCTCATCCACAAGATTAAAATACAAAGAGATCGTGGCAAGTCCAAAATCTaGAGGATAGGCAGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: PLGMYLELIHKIKIQRDRGKSKI*RIGRQA
Trigger: AGCCTGCCTGCCTATCCTTCAGATTTTGGACTTGCC...ACGATCTCTTTGTATTTTAATCTTGTGGATGAGCTCTAAGTACATGCCCAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489219.5
CDS-3UTR TCA 90 bp TTGACCCTTTGTGGGCTCGAACATAGAAGGACATATGGCTTGGTCCTGTTGCTTGTTAATCATGCTGCTTaGAGTCCTTATGCACACAGA +
Preference number: 4 (lower is better)
Translates to: LTLCGLEHRRTYGLVLLLVNHAA*SPYAHR
Trigger: TCTGTGTGCATAAGGACTTCAAGCAGCATGATTAAC...AAGCAACAGGACCAAGCCATATGTCCTTCTATGTTCGAGCCCACAAAGGGTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487088.5
CDS-3UTR GCA 90 bp GCACACCCAGGCAGAGGGAAATGTCCAATCTGGGAACTTTTCCTTCAGAGCATCTCTTATGAAGGCTGTTaGTTTGCACTTCAATCAGTT +
Preference number: 4 (lower is better)
Translates to: AHPGRGKCPIWELFLQSISYEGC*FALQSV
Trigger: AACTGATTGAAGTGCAAAGCAACAGCCTTCATAAGA...GATGCTCTGAAGGAAAAGTTCCCAGATTGGACATTTCCCTCTGCCTGGGTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR GCA 90 bp ATGGAAGTCCCTGCAGTAAGTAGGCAACATGCTACCCTTCTATTCAACACAGCATGTGAGCAATGGGAATaGTACCCAGACAGCACTAAT +
Preference number: 4 (lower is better)
Translates to: MEVPAVSRQHATLLFNTACEQWE*YPDSTN
Trigger: ATTAGTGCTGTCTGGGTAGCATTCCCATTGCTCACA...TGCTGTGTTGAATAGAAGGGTAGCATGTTGCCTACTTACTGCAGGGACTTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR GCA 90 bp ATGGAAGTCCCTGCAGTAAGTAGGCAACATGCTACCCTTCTATTCAACACAGCATGCTTGAAGTCCTTATaGACACAGAGCTTTGTGAGC +
Preference number: 4 (lower is better)
Translates to: MEVPAVSRQHATLLFNTACLKSL*TQSFVS
Trigger: GCTCACAAAGCTCTGTGTGCATAAGGACTTCAAGCA...TGCTGTGTTGAATAGAAGGGTAGCATGTTGCCTACTTACTGCAGGGACTTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR GCA 90 bp GGAGAAACCATGTCACATGGAGTATCCACTGGGCATGTACTTAGAGCTCATCCAAGAGTCCCGTTTAACTaGATTTCCTTCCAAGTCATG +
Preference number: 4 (lower is better)
Translates to: GETMSHGVSTGHVLRAHPRVPFN*ISFQVM
Trigger: CATGACTTGGAAGGAAATGCAGTTAAACGGGACTCT...TGGATGAGCTCTAAGTACATGCCCAGTGGATACTCCATGTGACATGGTTTCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000487088.5
ENST00000489219.5
CDS-3UTR GCA 90 bp GGAGAAACCATGTCACATGGAGTATCCACTGGGCATGTACTTAGAGCTCATCCATTCCTGATCAGAAAGTaGACTGGAAGATACCAAGGA +
Preference number: 4 (lower is better)
Translates to: GETMSHGVSTGHVLRAHPFLIRK*TGRYQG
Trigger: TCCTTGGTATCTTCCAGTGCACTTTCTGATCAGGAA...TGGATGAGCTCTAAGTACATGCCCAGTGGATACTCCATGTGACATGGTTTCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000487088.5
ENST00000489219.5
CDS-3UTR GCA 90 bp CATCCACGTAACATAGGGAGAAACCATGTCACATGGAGTATCCACTGGGCATGTTGTTCTTCTGAAACCTaGACTTCTATCCAGAACTGC +
Preference number: 4 (lower is better)
Translates to: HPRNIGRNHVTWSIHWACCSSET*TSIQNC
Trigger: GCAGTTCTGGATAGAAGTGCAGGTTTCAGAAGAACA...ACATGCCCAGTGGATACTCCATGTGACATGGTTTCTCCCTATGTTACGTGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000487088.5
ENST00000489219.5
CDS-3UTR GCA 90 bp CTGGCTGGAAAACAAAAAGATAGGCCCAGTGCATCAGTAAGATTATACCATGAAGCCTCAAGAGTGCAATaGTTCTCTCCCAGCCCTATG +
Preference number: 4 (lower is better)
Translates to: LAGKQKDRPSASVRLYHEASRVQ*FSPSPM
Trigger: CATAGGGCTGGGAGAGAAGCATTGCACTCTTGAGGC...TTCATGGTATAATCTTACTGATGCACTGGGCCTATCTTTTTGTTTTCCAGCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR GCA 90 bp AAACCATGTCACATGGAGTATCCACTGGGCATGTACTTAGAGCTCATCCACAAGCCTTTTAAGTCCTCATaGTGCCATTACGCAGGATCT +
Preference number: 4 (lower is better)
Translates to: KPCHMEYPLGMYLELIHKPFKSS*CHYAGS
Trigger: AGATCCTGCGTAATGGCAGCATGAGGACTTAAAAGG...CTTGTGGATGAGCTCTAAGTACATGCCCAGTGGATACTCCATGTGACATGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR CCA 90 bp CTGGCTGGAAAACAAAAAGATAGGCCCAGTGCATCAGTAAGATTATACCATGAAGCTGGGCTCCATCTCTaGGTTCCAGCTTTACCACAA +
Preference number: 4 (lower is better)
Translates to: LAGKQKDRPSASVRLYHEAGLHL*VPALPQ
Trigger: TTGTGGTAAAGCTGGAACCCAGAGATGGAGCCCAGC...TTCATGGTATAATCTTACTGATGCACTGGGCCTATCTTTTTGTTTTCCAGCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR CCA 90 bp ACTGCCATGCAGAGGCCTGGAGTCCATGGGAGTAAAAGACAAAGTAGTCTCCTCACAAGAAAACAGCAATaGACAAACAGCGAAATGTCA +
Preference number: 4 (lower is better)
Translates to: TAMQRPGVHGSKRQSSLLTRKQQ*TNSEMS
Trigger: TGACATTTCGCTGTTTGTCCATTGCTGTTTTCTTGT...GAGGAGACTACTTTGTCTTTTACTCCCATGGACTCCAGGCCTCTGCATGGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR CCA 90 bp GAACTGCCATGCAGAGGCCTGGAGTCCATGGGAGTAAAAGACAAAGTAGTCTCCACAAGAAAACAGCAATaGACAAACAGCGAAATGTCA +
Preference number: 4 (lower is better)
Translates to: ELPCRGLESMGVKDKVVSTRKQQ*TNSEMS
Trigger: TGACATTTCGCTGTTTGTCCATTGCTGTTTTCTTGT...GGAGACTACTTTGTCTTTTACTCCCATGGACTCCAGGCCTCTGCATGGCAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR CCA 90 bp TACGCAGGATCTGAACCACCTACACGTACAGTGGTCTCATTCCAGTATAAGCCAGCAATAAATTTTCCTTaGGCACCATGCTGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: YAGSEPPTRTVVSFQYKPAINFP*APCCLK
Trigger: CTTCAAGCAGCATGGTGCCCAAGGAAAATTTATTGC...TGGCTTATACTGGAATGAGACCACTGTACGTGTAGGTGGTTCAGATCCTGCGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR CCA 90 bp ATGGAAGTCCCTGCAGTAAGTAGGCAACATGCTACCCTTCTATTCAACACAGCACAGCACAACATCAGGTaGGATTTCAGAACCACTTCT +
Preference number: 4 (lower is better)
Translates to: MEVPAVSRQHATLLFNTAQHNIR*DFRTTS
Trigger: AGAAGTGGTTCTGAAATCCCACCTGATGTTGTGCTG...TGCTGTGTTGAATAGAAGGGTAGCATGTTGCCTACTTACTGCAGGGACTTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR CCA 90 bp CTGCTGGAACCAAAAAGCCATGAGAGGTACTGCTGTGATACACCTTACAAGCTATCTTGGAGAAACTTCTaGGGCAGGAAGATACCAGTT +
Preference number: 4 (lower is better)
Translates to: LLEPKSHERYCCDTPYKLSWRNF*GRKIPV
Trigger: AACTGGTATCTTCCTGCCCCAGAAGTTTCTCCAAGA...TAGCTTGTAAGGTGTATCACAGCAGTACCTCTCATGGCTTTTTGGTTCCAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR CCA 90 bp TACGCAGGATCTGAACCACCTACACGTACAGTGGTCTCATTCCAGTATAAGCCAGAAGGACATATGGCTTaGTCCTGTTGCTTCAAAAGT +
Preference number: 4 (lower is better)
Translates to: YAGSEPPTRTVVSFQYKPEGHMA*SCCFKS
Trigger: ACTTTTGAAGCAACAGGACCAAGCCATATGTCCTTC...TGGCTTATACTGGAATGAGACCACTGTACGTGTAGGTGGTTCAGATCCTGCGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR CCA 90 bp AAATGTCCAATCTGGGAACTTTTCCTTCAGAGCATCCAGTTGAGGGGATCTCTTTCCTTTACTTGTGACTaGGGTGCCATTGCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: KCPIWELFLQSIQLRGSLSFTCD*GAIAKR
Trigger: TCTCTTGGCAATGGCACCCCAGTCACAAGTAAAGGA...AAGAGATCCCCTCAACTGGATGCTCTGAAGGAAAAGTTCCCAGATTGGACATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR CCA 90 bp CCTCCATCCACACCCACAGCTCAGGTTAGTTGCAAAAGTTACACATCTTCTCTAGGGAAATGTCCAATCTaGGAACTTTTCCTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: PPSTPTAQVSCKSYTSSLGKCPI*ELFLQS
Trigger: GCTCTGAAGGAAAAGTTCCCAGATTGGACATTTCCC...TAGAGAAGATGTGTAACTTTTGCAACTAACCTGAGCTGTGGGTGTGGATGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR CCA 90 bp CCTCCATCCACACCCACAGCTCAGGTTAGTTGCAAAAGTTACACATCTTCTCTAACCCCTGTGGTGGTGTaGCTACATTCTTTGAGTTTA +
Preference number: 4 (lower is better)
Translates to: PPSTPTAQVSCKSYTSSLTPVVV*LHSLSL
Trigger: TAAACTCAAAGAATGTAGCCACACCACCACAGGGGT...TAGAGAAGATGTGTAACTTTTGCAACTAACCTGAGCTGTGGGTGTGGATGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR TCA 90 bp CATCCACGTAACATAGGGAGAAACCATGTCACATGGAGTATCCACTGGGCATGTTCTACTGAAATCTTATaGAGGCTGTTGCTTTGCACT +
Preference number: 4 (lower is better)
Translates to: HPRNIGRNHVTWSIHWACSTEIL*RLLLCT
Trigger: AGTGCAAAGCAACAGCCTTCATAAGATTTCAGTAGA...ACATGCCCAGTGGATACTCCATGTGACATGGTTTCTCCCTATGTTACGTGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000487088.5
ENST00000489219.5
CDS-3UTR TCA 90 bp ACCCAGGCAGAGGGAAATGTCCAATCTGGGAACTTTTCCTTCAGAGCATCCAGTTTACCACAACATTGGTaGTGTTGTCATAATAGCTTG +
Preference number: 4 (lower is better)
Translates to: TQAEGNVQSGNFSFRASSLPQHW*CCHNSL
Trigger: CAAGCTATTATGACAACATCACCAATGTTGTGGTAA...ACTGGATGCTCTGAAGGAAAAGTTCCCAGATTGGACATTTCCCTCTGCCTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR TCA 90 bp CTCACAGTGAGCTCGGATACTATCATTGATCTCAGGAATGTGAGGGGTTATGTGAGGGTGTTTAGCTGCTaGAACATAAGCTTGAACCAA +
Preference number: 4 (lower is better)
Translates to: LTVSSDTIIDLRNVRGYVRVFSC*NISLNQ
Trigger: TTGGTTCAAGCTTATGTTTCAGCAGCTAAACACCCT...CACATAACCCCTCACATTCCTGAGATCAATGATAGTATCCGAGCTCACTGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487088.5
CDS-3UTR TCA 90 bp AAACCATGTCACATGGAGTATCCACTGGGCATGTACTTAGAGCTCATCCACAAGACGAAAGTCAGTATCTaGAGGAATGATTCCACTCTG +
Preference number: 4 (lower is better)
Translates to: KPCHMEYPLGMYLELIHKTKVSI*RNDSTL
Trigger: CAGAGTGGAATCATTCCTTCAGATACTGACTTTCGT...CTTGTGGATGAGCTCTAAGTACATGCCCAGTGGATACTCCATGTGACATGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000487088.5
ENST00000489219.5
CDS-3UTR TCA 90 bp GGAGAAACCATGTCACATGGAGTATCCACTGGGCATGTACTTAGAGCTCATCCATTGTCACCTGCTCTCTaGATGGAATCTGTTAGAATT +
Preference number: 4 (lower is better)
Translates to: GETMSHGVSTGHVLRAHPLSPAL*MESVRI
Trigger: AATTCTAACAGATTCCATTCAGAGAGCAGGTGACAA...TGGATGAGCTCTAAGTACATGCCCAGTGGATACTCCATGTGACATGGTTTCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000487088.5
ENST00000489219.5
CDS-3UTR TCA 90 bp CAGCCCTATGGCAATCACTTTCCAGTGACCTACACAGAGTTATATTCTCAAGGGGAAGTGGTTATACCATaGGAGAGACTGTCCAATAAG +
Preference number: 4 (lower is better)
Translates to: QPYGNHFPVTYTELYSQGEVVIP*ERLSNK
Trigger: CTTATTGGACAGTCTCTCTCATGGTATAACCACTTC...CCCTTGAGAATATAACTCTGTGTAGGTCACTGGAAAGTGATTGCCATAGGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
CDS-3UTR TCA 90 bp CCTCCATCCACACCCACAGCTCAGGTTAGTTGCAAAAGTTACACATCTTCTCTAGAAGTGGTTATACCATaGGAGAGACTGTCCAATAAG +
Preference number: 4 (lower is better)
Translates to: PPSTPTAQVSCKSYTSSLEVVIP*ERLSNK
Trigger: CTTATTGGACAGTCTCTCTCATGGTATAACCACTTC...TAGAGAAGATGTGTAACTTTTGCAACTAACCTGAGCTGTGGGTGTGGATGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR TCA 90 bp GGAGAAACCATGTCACATGGAGTATCCACTGGGCATGTACTTAGAGCTCATCCACAAATACTGCCCAGATaGGGTACAATGCATAAAGAT +
Preference number: 4 (lower is better)
Translates to: GETMSHGVSTGHVLRAHPQILPR*GTMHKD
Trigger: ATCTTTATGCATTGTACCTCATCTGGGCAGTATTTG...TGGATGAGCTCTAAGTACATGCCCAGTGGATACTCCATGTGACATGGTTTCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000489219.5
CDS-3UTR TCA 90 bp AAACCATGTCACATGGAGTATCCACTGGGCATGTACTTAGAGCTCATCCACAAGGATACCAGTTTTTCCTaGTCAGAAAGTGCACTGGAA +
Preference number: 4 (lower is better)
Translates to: KPCHMEYPLGMYLELIHKDTSFS*SESALE
Trigger: TTCCAGTGCACTTTCTGATCAGGAAAAACTGGTATC...CTTGTGGATGAGCTCTAAGTACATGCCCAGTGGATACTCCATGTGACATGGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000487088.5
ENST00000489219.5
CDS-3UTR TCA 90 bp CCTCCATCCACACCCACAGCTCAGGTTAGTTGCAAAAGTTACACATCTTCTCTAGATATGAGTCGGAAATaGGGAGGATTTCTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: PPSTPTAQVSCKSYTSSLDMSRK*GGFLGE
Trigger: TTCTCCAAGAAATCCTCCTCATTTCCGACTCATATC...TAGAGAAGATGTGTAACTTTTGCAACTAACCTGAGCTGTGGGTGTGGATGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR TCA 90 bp AAACCATGTCACATGGAGTATCCACTGGGCATGTACTTAGAGCTCATCCACAAGTTCAGGATGTTCTTCTaGAACCTGCACTTCTATCCA +
Preference number: 4 (lower is better)
Translates to: KPCHMEYPLGMYLELIHKFRMFF*NLHFYP
Trigger: TGGATAGAAGTGCAGGTTTCAGAAGAACATCCTGAA...CTTGTGGATGAGCTCTAAGTACATGCCCAGTGGATACTCCATGTGACATGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000487088.5
ENST00000489219.5
CDS-3UTR TCA 90 bp GGAGAAACCATGTCACATGGAGTATCCACTGGGCATGTACTTAGAGCTCATCCACATTACCTCAGTGAATaGTATTTTACCCACCATCCA +
Preference number: 4 (lower is better)
Translates to: GETMSHGVSTGHVLRAHPHYLSE*YFTHHP
Trigger: TGGATGGTGGGTAAAATATCATTCACTGAGGTAATG...TGGATGAGCTCTAAGTACATGCCCAGTGGATACTCCATGTGACATGGTTTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
CDS-3UTR TCA 90 bp CAGCCCTATGGCAATCACTTTCCAGTGACCTACACAGAGTTATATTCTCAAGGGAGGCAACGAGGGGCATaGTTTAAAAAGCACATCATA +
Preference number: 4 (lower is better)
Translates to: QPYGNHFPVTYTELYSQGRQRGA*FKKHII
Trigger: TATGATGTGCTTTTTAAATCATGCCCCTCGTTGCCT...CCCTTGAGAATATAACTCTGTGTAGGTCACTGGAAAGTGATTGCCATAGGGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR TCA 90 bp TACGCAGGATCTGAACCACCTACACGTACAGTGGTCTCATTCCAGTATAAGCCAAGAAATATGACAGCATaGTGCAAGGCTTCTGAAGAT +
Preference number: 4 (lower is better)
Translates to: YAGSEPPTRTVVSFQYKPRNMTA*CKASED
Trigger: ATCTTCAGAAGCCTTGCATCATGCTGTCATATTTCT...TGGCTTATACTGGAATGAGACCACTGTACGTGTAGGTGGTTCAGATCCTGCGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR TCA 90 bp CATCCACGTAACATAGGGAGAAACCATGTCACATGGAGTATCCACTGGGCATGTAGAAATATGACAGCATaGTGCAAGGCTTCTGAAGAT +
Preference number: 4 (lower is better)
Translates to: HPRNIGRNHVTWSIHWACRNMTA*CKASED
Trigger: ATCTTCAGAAGCCTTGCATCATGCTGTCATATTTCT...ACATGCCCAGTGGATACTCCATGTGACATGGTTTCTCCCTATGTTACGTGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000487088.5
ENST00000489219.5
CDS-3UTR TCA 90 bp GGAGAAACCATGTCACATGGAGTATCCACTGGGCATGTACTTAGAGCTCATCCAACCTTTGTCGACACATaGTTCGATTTCTTAAAGCCA +
Preference number: 4 (lower is better)
Translates to: GETMSHGVSTGHVLRAHPTFVDT*FDFLKP
Trigger: TGGCTTTAAGAAATCGAATCATGTGTCGACAAAGGT...TGGATGAGCTCTAAGTACATGCCCAGTGGATACTCCATGTGACATGGTTTCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR GCA 90 bp ACCCAGGCAGAGGGAAATGTCCAATCTGGGAACTTTTCCTTCAGAGCATCCAGTTATTTTGGCTACAGTTaGAGTTCCATACAGACAAAC +
Preference number: 4 (lower is better)
Translates to: TQAEGNVQSGNFSFRASSYFGYS*SSIQTN
Trigger: GTTTGTCTGTATGGAACTGCAACTGTAGCCAAAATA...ACTGGATGCTCTGAAGGAAAAGTTCCCAGATTGGACATTTCCCTCTGCCTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR GCA 90 bp ATCCCAAGGTGTCTGTTCTTTGGATATGAGTCGGAAATGAGGAGGATTTCTTGGTGTGAGCAATGGGAATaGTACCCAGACAGCACTAAT +
Preference number: 4 (lower is better)
Translates to: IPRCLFFGYESEMRRISWCEQWE*YPDSTN
Trigger: ATTAGTGCTGTCTGGGTAGCATTCCCATTGCTCACA...CCAAGAAATCCTCCTCATTTCCGACTCATATCCAAAGAACAGACACCTTGGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487088.5
CDS-3UTR GCA 90 bp ACTGCCATGCAGAGGCCTGGAGTCCATGGGAGTAAAAGACAAAGTAGTCTCCTCATGGCTTGGTCCTGTTaGTTCAAAAGTCAATTTTAT +
Preference number: 4 (lower is better)
Translates to: TAMQRPGVHGSKRQSSLLMAWSC*FKSQFY
Trigger: ATAAAATTGACTTTTGAAGCAACAGGACCAAGCCAT...GAGGAGACTACTTTGTCTTTTACTCCCATGGACTCCAGGCCTCTGCATGGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000487088.5
CDS-3UTR GCA 90 bp CAGCCCTATGGCAATCACTTTCCAGTGACCTACACAGAGTTATATTCTCAAGGGTGTTCTTCTGAAACCTaGACTTCTATCCAGAACTGC +
Preference number: 4 (lower is better)
Translates to: QPYGNHFPVTYTELYSQGCSSET*TSIQNC
Trigger: GCAGTTCTGGATAGAAGTGCAGGTTTCAGAAGAACA...CCCTTGAGAATATAACTCTGTGTAGGTCACTGGAAAGTGATTGCCATAGGGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
CDS-3UTR GCA 90 bp CAGCCCTATGGCAATCACTTTCCAGTGACCTACACAGAGTTATATTCTCAAGGGTTTAAGTCCTCATGCTaGCATTACGCAGGATCTGAA +
Preference number: 4 (lower is better)
Translates to: QPYGNHFPVTYTELYSQGFKSSC*HYAGSE
Trigger: TTCAGATCCTGCGTAATGGCAGCATGAGGACTTAAA...CCCTTGAGAATATAACTCTGTGTAGGTCACTGGAAAGTGATTGCCATAGGGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR GCA 90 bp TCCAGTGACCTACACAGAGTTATATTCTCAAGGGGAATCATTACCTCAGTGAATTTATTCAGCTCTGGTTaGAGCCCCATCTACATGGGC +
Preference number: 4 (lower is better)
Translates to: SSDLHRVIFSRGIITSVNLFSSG*SPIYMG
Trigger: GCCCATGTAGATGGGGCTGCAACCAGAGCTGAATAA...ATTCACTGAGGTAATGATTCCCCTTGAGAATATAACTCTGTGTAGGTCACTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR GCA 90 bp GGAGAAACCATGTCACATGGAGTATCCACTGGGCATGTACTTAGAGCTCATCCACCTGCAAACCTTATGTaGTACCTGACAGATAAAAGT +
Preference number: 4 (lower is better)
Translates to: GETMSHGVSTGHVLRAHPPANLM*YLTDKS
Trigger: ACTTTTATCTGTCAGGTAGCACATAAGGTTTGCAGG...TGGATGAGCTCTAAGTACATGCCCAGTGGATACTCCATGTGACATGGTTTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR CCA 90 bp CCTAGGAACCCAGTTCAAGTGGTGGATTTGAGTTCTTCAGGAATCGAAGCATCACAGAATTTCATTTTCTaGACTTCCTGTAGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: PRNPVQVVDLSSSGIEASQNFIF*TSCSPG
Trigger: CCCAGGACTACAGGAAGTCCAGAAAATGAAATTCTG...TGATGCTTCGATTCCTGAAGAACTCAAATCCACCACTTGAACTGGGTTCCTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR CCA 90 bp GGTGTGGCTACATTCTTTGAGTTTAGAAAACGAGATAAAGAATTGCTCATATCTGCCAAGACAGCATGCTaGGCTCCATCTCTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: GVATFFEFRKRDKELLISAKTAC*APSLGS
Trigger: GGAACCCAGAGATGGAGCCCAGCATGCTGTCTTGGC...AGATATGAGCAATTCTTTATCTCGTTTTCTAAACTCAAAGAATGTAGCCACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR CCA 90 bp CGATTTCTTAAAGCCATTGGCTCTGGAGAATCTGAGACACCTCCATCCACACCCTTTTCAGGACCTGTTTaGAATACAAGTTCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: RFLKAIGSGESETPPSTPFSGPV*NTSSFP
Trigger: AGGGAAAGAACTTGTATTCCAAACAGGTCCTGAAAA...GGGTGTGGATGGAGGTGTCTCAGATTCTCCAGAGCCAATGGCTTTAAGAAATCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR CCA 90 bp CATCCACGTAACATAGGGAGAAACCATGTCACATGGAGTATCCACTGGGCATGTCCGCTGTGTCATACTTaGTGTGATAAATGTATCCAT +
Preference number: 4 (lower is better)
Translates to: HPRNIGRNHVTWSIHWACPLCHT*CDKCIH
Trigger: ATGGATACATTTATCACACCAAGTATGACACAGCGG...ACATGCCCAGTGGATACTCCATGTGACATGGTTTCTCCCTATGTTACGTGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000487088.5
ENST00000489219.5
CDS-3UTR CCA 90 bp CCTAGGAACCCAGTTCAAGTGGTGGATTTGAGTTCTTCAGGAATCGAAGCATCAGCAATAAATTTTCCTTaGGCACCATGCTGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: PRNPVQVVDLSSSGIEASAINFP*APCCLK
Trigger: CTTCAAGCAGCATGGTGCCCAAGGAAAATTTATTGC...TGATGCTTCGATTCCTGAAGAACTCAAATCCACCACTTGAACTGGGTTCCTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR CCA 90 bp CATCCACGTAACATAGGGAGAAACCATGTCACATGGAGTATCCACTGGGCATGTAAGAAACACTCTCTTTaGCTTCGGATTAGCAGGATT +
Preference number: 4 (lower is better)
Translates to: HPRNIGRNHVTWSIHWACKKHSL*LRISRI
Trigger: AATCCTGCTAATCCGAAGCCAAAGAGAGTGTTTCTT...ACATGCCCAGTGGATACTCCATGTGACATGGTTTCTCCCTATGTTACGTGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000487088.5
ENST00000489219.5
CDS-3UTR CCA 90 bp TCTCTAATGGTACTGCATATGGTGTGTAATCCTAGGAACCCAGTTCAAGTGGTGTCTTGGAGAAACTTCTaGGGCAGGAAGATACCAGTT +
Preference number: 4 (lower is better)
Translates to: SLMVLHMVCNPRNPVQVVSWRNF*GRKIPV
Trigger: AACTGGTATCTTCCTGCCCCAGAAGTTTCTCCAAGA...CACCACTTGAACTGGGTTCCTAGGATTACACACCATATGCAGTACCATTAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR CCA 90 bp GAGACCACTGAGAAAGTGTTGACCCTTTGTGGGCTCGAACATAGAAGGACATATGAAGGACATATGGCTTaGTCCTGTTGCTTCAAAAGT +
Preference number: 4 (lower is better)
Translates to: ETTEKVLTLCGLEHRRTYEGHMA*SCCFKS
Trigger: ACTTTTGAAGCAACAGGACCAAGCCATATGTCCTTC...ATATGTCCTTCTATGTTCGAGCCCACAAAGGGTCAACACTTTCTCAGTGGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487088.5
CDS-3UTR CCA 90 bp AAATGTCCAATCTGGGAACTTTTCCTTCAGAGCATCCAGTTGAGGGGATCTCTTAGAAACCATGTCACATaGAGTATCCACTGGGCATGT +
Preference number: 4 (lower is better)
Translates to: KCPIWELFLQSIQLRGSLRNHVT*SIHWAC
Trigger: ACATGCCCAGTGGATACTCCATGTGACATGGTTTCT...AAGAGATCCCCTCAACTGGATGCTCTGAAGGAAAAGTTCCCAGATTGGACATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR CCA 90 bp AAATGTCCAATCTGGGAACTTTTCCTTCAGAGCATCCAGTTGAGGGGATCTCTTGGGCAGCTATTGAAGTaGATTGTTGGCTTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: KCPIWELFLQSIQLRGSLGQLLK*IVGFVL
Trigger: AAGGACAAAGCCAACAATCCACTTCAATAGCTGCCC...AAGAGATCCCCTCAACTGGATGCTCTGAAGGAAAAGTTCCCAGATTGGACATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489219.5
CDS-3UTR CCA 90 bp TCCAGTGACCTACACAGAGTTATATTCTCAAGGGGAATCATTACCTCAGTGAATGCAGCCCCATCTACATaGGCCCAGTTAGTTTTTAGG +
Preference number: 4 (lower is better)
Translates to: SSDLHRVIFSRGIITSVNAAPST*AQLVFR
Trigger: CCTAAAAACTAACTGGGCCCATGTAGATGGGGCTGC...ATTCACTGAGGTAATGATTCCCCTTGAGAATATAACTCTGTGTAGGTCACTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000339450.10
3UTR CAA 72 bp GTGTGTAATCCTAGGAACCCAGTTCAAGTGGTGGATTaGAGTTCTTCAGGAATCGAAGCATCAGTTTATCCC +
Preference number: 4 (lower is better)
Translates to: VCNPRNPVQVVD*SSSGIEASVYP
Trigger: GGGATAAACTGATGCTTCGATTCCTGAAGAACTCAAATCCACCACTTGAACTGGGTTCCTAGGATTACACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR TCA 90 bp CTGCTGGAACCAAAAAGCCATGAGAGGTACTGCTGTGATACACCTTACAAGCTACCGTTGTACATCTACTaGAATCTTATGAAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: LLEPKSHERYCCDTPYKLPLYIY*NLMKAV
Trigger: AACAGCCTTCATAAGATTTCAGTAGATGTACAACGG...TAGCTTGTAAGGTGTATCACAGCAGTACCTCTCATGGCTTTTTGGTTCCAGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR TCA 90 bp CTGCTGGAACCAAAAAGCCATGAGAGGTACTGCTGTGATACACCTTACAAGCTACAGTATCTGAAGGAATaGTTCCACTCTGAAAAACCT +
Preference number: 4 (lower is better)
Translates to: LLEPKSHERYCCDTPYKLQYLKE*FHSEKP
Trigger: AGGTTTTTCAGAGTGGAATCATTCCTTCAGATACTG...TAGCTTGTAAGGTGTATCACAGCAGTACCTCTCATGGCTTTTTGGTTCCAGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR TCA 90 bp TCTCTAATGGTACTGCATATGGTGTGTAATCCTAGGAACCCAGTTCAAGTGGTGCATGTAGTTTATGATTaGGCCAATACGAGAGGGGTA +
Preference number: 4 (lower is better)
Translates to: SLMVLHMVCNPRNPVQVVHVVYD*ANTRGV
Trigger: TACCCCTCTCGTATTGGCTCAATCATAAACTACATG...CACCACTTGAACTGGGTTCCTAGGATTACACACCATATGCAGTACCATTAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR TCA 90 bp AAATGTCCAATCTGGGAACTTTTCCTTCAGAGCATCCAGTTGAGGGGATCTCTTCATGTAGTTTATGATTaGGCCAATACGAGAGGGGTA +
Preference number: 4 (lower is better)
Translates to: KCPIWELFLQSIQLRGSLHVVYD*ANTRGV
Trigger: TACCCCTCTCGTATTGGCTCAATCATAAACTACATG...AAGAGATCCCCTCAACTGGATGCTCTGAAGGAAAAGTTCCCAGATTGGACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR TCA 90 bp AAACCATGTCACATGGAGTATCCACTGGGCATGTACTTAGAGCTCATCCACAAGTATAATCAAACCCATTaGTCCATATTCCAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: KPCHMEYPLGMYLELIHKYNQTH*SIFQSP
Trigger: GGGACTCTGGAATATGGATCAATGGGTTTGATTATA...CTTGTGGATGAGCTCTAAGTACATGCCCAGTGGATACTCCATGTGACATGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000487088.5
ENST00000489219.5
CDS-3UTR TCA 90 bp CATCCACGTAACATAGGGAGAAACCATGTCACATGGAGTATCCACTGGGCATGTTCATTAACAATGCTCTaGCAGTGTACATCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: HPRNIGRNHVTWSIHWACSLTML*QCTSFL
Trigger: CAAGAAAGATGTACACTGTCAGAGCATTGTTAATGA...ACATGCCCAGTGGATACTCCATGTGACATGGTTTCTCCCTATGTTACGTGGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
CDS-3UTR TCA 90 bp CTGCTGGAACCAAAAAGCCATGAGAGGTACTGCTGTGATACACCTTACAAGCTACAGAATCTACTAATGTaGCAGACAAACGGTATGCTT +
Preference number: 4 (lower is better)
Translates to: LLEPKSHERYCCDTPYKLQNLLM*QTNGML
Trigger: AAGCATACCGTTTGTCTGTCACATTAGTAGATTCTG...TAGCTTGTAAGGTGTATCACAGCAGTACCTCTCATGGCTTTTTGGTTCCAGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR GCA 90 bp CAGCCCTATGGCAATCACTTTCCAGTGACCTACACAGAGTTATATTCTCAAGGGAAACATCTCAAATACTaGCCAGATGAGGTACAATGC +
Preference number: 4 (lower is better)
Translates to: QPYGNHFPVTYTELYSQGKHLKY*PDEVQC
Trigger: GCATTGTACCTCATCTGGGCAGTATTTGAGATGTTT...CCCTTGAGAATATAACTCTGTGTAGGTCACTGGAAAGTGATTGCCATAGGGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
CDS-3UTR GCA 90 bp ATGGAAGTCCCTGCAGTAAGTAGGCAACATGCTACCCTTCTATTCAACACAGCAAAACATCTCAAATACTaGCCAGATGAGGTACAATGC +
Preference number: 4 (lower is better)
Translates to: MEVPAVSRQHATLLFNTAKHLKY*PDEVQC
Trigger: GCATTGTACCTCATCTGGGCAGTATTTGAGATGTTT...TGCTGTGTTGAATAGAAGGGTAGCATGTTGCCTACTTACTGCAGGGACTTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR GCA 90 bp AAGGAAAACCACAAAGAGGTGCATTCTCCTCACAGTGAGCTCGGATACTATCATTTCCTGATCAGAAAGTaGACTGGAAGATACCAAGGA +
Preference number: 4 (lower is better)
Translates to: KENHKEVHSPHSELGYYHFLIRK*TGRYQG
Trigger: TCCTTGGTATCTTCCAGTGCACTTTCTGATCAGGAA...ATGATAGTATCCGAGCTCACTGTGAGGAGAATGCACCTCTTTGTGGTTTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487088.5
CDS-3UTR CCA 90 bp CAGCCCTATGGCAATCACTTTCCAGTGACCTACACAGAGTTATATTCTCAAGGGCACCTGCTCTCTGAATaGAATCTGTTAGAATTCTGT +
Preference number: 4 (lower is better)
Translates to: QPYGNHFPVTYTELYSQGHLLSE*NLLEFC
Trigger: ACAGAATTCTAACAGATTCCATTCAGAGAGCAGGTG...CCCTTGAGAATATAACTCTGTGTAGGTCACTGGAAAGTGATTGCCATAGGGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
CDS-3UTR CCA 90 bp AAACCATGTCACATGGAGTATCCACTGGGCATGTACTTAGAGCTCATCCACAAGCCAGATACTGGGCACTaGCATTCATGTAATAAAATC +
Preference number: 4 (lower is better)
Translates to: KPCHMEYPLGMYLELIHKPDTGH*HSCNKI
Trigger: GATTTTATTACATGAATGCCAGTGCCCAGTATCTGG...CTTGTGGATGAGCTCTAAGTACATGCCCAGTGGATACTCCATGTGACATGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000487088.5
ENST00000489219.5
CDS-3UTR CCA 90 bp CATCCACGTAACATAGGGAGAAACCATGTCACATGGAGTATCCACTGGGCATGTACAAGAAAACAGCAATaGACAAACAGCGAAATGTCA +
Preference number: 4 (lower is better)
Translates to: HPRNIGRNHVTWSIHWACTRKQQ*TNSEMS
Trigger: TGACATTTCGCTGTTTGTCCATTGCTGTTTTCTTGT...ACATGCCCAGTGGATACTCCATGTGACATGGTTTCTCCCTATGTTACGTGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000487088.5
ENST00000489219.5
CDS-3UTR CCA 90 bp TCCAGTGACCTACACAGAGTTATATTCTCAAGGGGAATCATTACCTCAGTGAATTACAGCCAGCCAAAATaGATGCCAGCACAACATCAG +
Preference number: 4 (lower is better)
Translates to: SSDLHRVIFSRGIITSVNYSQPK*MPAQHQ
Trigger: CTGATGTTGTGCTGGCATCCATTTTGGCTGGCTGTA...ATTCACTGAGGTAATGATTCCCCTTGAGAATATAACTCTGTGTAGGTCACTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
CDS-3UTR CCA 90 bp CTGCTGGAACCAAAAAGCCATGAGAGGTACTGCTGTGATACACCTTACAAGCTATTGCTTGACCATTTCTaGCATTTAAATGACCTCCCA +
Preference number: 4 (lower is better)
Translates to: LLEPKSHERYCCDTPYKLLLDHF*HLNDLP
Trigger: TGGGAGGTCATTTAAATGCCAGAAATGGTCAAGCAA...TAGCTTGTAAGGTGTATCACAGCAGTACCTCTCATGGCTTTTTGGTTCCAGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR CCA 90 bp CCACTGGGCATGTACTTAGAGCTCATCCACAAGATTAAAATACAAAGAGATCGTGTTCAAGATAATCCCTaGCAACCCCAATCTGCACCA +
Preference number: 4 (lower is better)
Translates to: PLGMYLELIHKIKIQRDRVQDNP*QPQSAP
Trigger: TGGTGCAGATTGGGGTTGCCAGGGATTATCTTGAAC...ACGATCTCTTTGTATTTTAATCTTGTGGATGAGCTCTAAGTACATGCCCAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487088.5
3UTR CAA 72 bp CAGATAAAAGTAGCAGGAGCCAGACTCTTGAAGCACTaGAGACTGATTTCTACAAAGTCCAGGAAGAGCAAT +
Preference number: 4 (lower is better)
Translates to: QIKVAGARLLKH*RLISTKSRKSN
Trigger: ATTGCTCTTCCTGGACTTTGTAGAAATCAGTCTCAAGTGCTTCAAGAGTCTGGCTCCTGCTACTTTTATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR TCA 90 bp AAACCATGTCACATGGAGTATCCACTGGGCATGTACTTAGAGCTCATCCACAAGTTACCACAACATTGGTaGTGTTGTCATAATAGCTTG +
Preference number: 4 (lower is better)
Translates to: KPCHMEYPLGMYLELIHKLPQHW*CCHNSL
Trigger: CAAGCTATTATGACAACATCACCAATGTTGTGGTAA...CTTGTGGATGAGCTCTAAGTACATGCCCAGTGGATACTCCATGTGACATGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000487088.5
ENST00000489219.5
CDS-3UTR TCA 90 bp CAGCCCTATGGCAATCACTTTCCAGTGACCTACACAGAGTTATATTCTCAAGGGTTACCACAACATTGGTaGTGTTGTCATAATAGCTTG +
Preference number: 4 (lower is better)
Translates to: QPYGNHFPVTYTELYSQGLPQHW*CCHNSL
Trigger: CAAGCTATTATGACAACATCACCAATGTTGTGGTAA...CCCTTGAGAATATAACTCTGTGTAGGTCACTGGAAAGTGATTGCCATAGGGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
CDS-3UTR TCA 90 bp CTGGCTGGAAAACAAAAAGATAGGCCCAGTGCATCAGTAAGATTATACCATGAACCACCATGTAGTTTATaGTTGAGCCAATACGAGAGG +
Preference number: 4 (lower is better)
Translates to: LAGKQKDRPSASVRLYHEPPCSL*LSQYER
Trigger: CCTCTCGTATTGGCTCAATCATAAACTACATGGTGG...TTCATGGTATAATCTTACTGATGCACTGGGCCTATCTTTTTGTTTTCCAGCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR TCA 90 bp TCCAGTGACCTACACAGAGTTATATTCTCAAGGGGAATCATTACCTCAGTGAATCCACCATGTAGTTTATaGTTGAGCCAATACGAGAGG +
Preference number: 4 (lower is better)
Translates to: SSDLHRVIFSRGIITSVNPPCSL*LSQYER
Trigger: CCTCTCGTATTGGCTCAATCATAAACTACATGGTGG...ATTCACTGAGGTAATGATTCCCCTTGAGAATATAACTCTGTGTAGGTCACTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
CDS-3UTR TCA 90 bp GGTGTGGCTACATTCTTTGAGTTTAGAAAACGAGATAAAGAATTGCTCATATCTGCACACAGAGCTTTGTaGGCAATGGGAATGCTACCC +
Preference number: 4 (lower is better)
Translates to: GVATFFEFRKRDKELLISAHRAL*AMGMLP
Trigger: GGGTAGCATTCCCATTGCTCACAAAGCTCTGTGTGC...AGATATGAGCAATTCTTTATCTCGTTTTCTAAACTCAAAGAATGTAGCCACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR TCA 90 bp TGGCTACATTCTTTGAGTTTAGAAAACGAGATAAAGAATTGCTCATATCTTCCCGGGCACCATGCTGCTTaGAGTCCTTATGCACACAGA +
Preference number: 4 (lower is better)
Translates to: WLHSLSLENEIKNCSYLPGHHAA*SPYAHR
Trigger: TCTGTGTGCATAAGGACTTCAAGCAGCATGGTGCCC...GGGAAGATATGAGCAATTCTTTATCTCGTTTTCTAAACTCAAAGAATGTAGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR TCA 90 bp TGGCTACATTCTTTGAGTTTAGAAAACGAGATAAAGAATTGCTCATATCTTCCCCCACTGAGAAAGTGTTaGCCCTTTGTGGGCTCGAAC +
Preference number: 4 (lower is better)
Translates to: WLHSLSLENEIKNCSYLPPLRKC*PFVGSN
Trigger: GTTCGAGCCCACAAAGGGTCAACACTTTCTCAGTGG...GGGAAGATATGAGCAATTCTTTATCTCGTTTTCTAAACTCAAAGAATGTAGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR TCA 90 bp CTGCTGGAACCAAAAAGCCATGAGAGGTACTGCTGTGATACACCTTACAAGCTATTTCTGGCATTTAAATaGCCTCCCAGAATATTACAC +
Preference number: 4 (lower is better)
Translates to: LLEPKSHERYCCDTPYKLFLAFK*PPRILH
Trigger: GTGTAATATTCTGGGAGGTCATTTAAATGCCAGAAA...TAGCTTGTAAGGTGTATCACAGCAGTACCTCTCATGGCTTTTTGGTTCCAGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR GCA 90 bp GAGACCACTGAGAAAGTGTTGACCCTTTGTGGGCTCGAACATAGAAGGACATATAAGAGAGATGAACACTaGTATAATGAGAACGGTAAC +
Preference number: 4 (lower is better)
Translates to: ETTEKVLTLCGLEHRRTYKRDEH*YNENGN
Trigger: GTTACCGTTCTCATTATAGCAGTGTTCATCTCTCTT...ATATGTCCTTCTATGTTCGAGCCCACAAAGGGTCAACACTTTCTCAGTGGTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487088.5
CDS-3UTR GCA 90 bp CCACTGGGCATGTACTTAGAGCTCATCCACAAGATTAAAATACAAAGAGATCGTTGCTTGAAGTCCTTATaGACACAGAGCTTTGTGAGC +
Preference number: 4 (lower is better)
Translates to: PLGMYLELIHKIKIQRDRCLKSL*TQSFVS
Trigger: GCTCACAAAGCTCTGTGTGCATAAGGACTTCAAGCA...ACGATCTCTTTGTATTTTAATCTTGTGGATGAGCTCTAAGTACATGCCCAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR GCA 90 bp CCACTGGGCATGTACTTAGAGCTCATCCACAAGATTAAAATACAAAGAGATCGTAAAACCACAAAGAGGTaGATTCTCCTCACAGTGAGC +
Preference number: 4 (lower is better)
Translates to: PLGMYLELIHKIKIQRDRKTTKR*ILLTVS
Trigger: GCTCACTGTGAGGAGAATGCACCTCTTTGTGGTTTT...ACGATCTCTTTGTATTTTAATCTTGTGGATGAGCTCTAAGTACATGCCCAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR GCA 90 bp CATCCACGTAACATAGGGAGAAACCATGTCACATGGAGTATCCACTGGGCATGTATGGCTTGGTCCTGTTaGTTCAAAAGTCAATTTTAT +
Preference number: 4 (lower is better)
Translates to: HPRNIGRNHVTWSIHWACMAWSC*FKSQFY
Trigger: ATAAAATTGACTTTTGAAGCAACAGGACCAAGCCAT...ACATGCCCAGTGGATACTCCATGTGACATGGTTTCTCCCTATGTTACGTGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000487088.5
CDS-3UTR GCA 90 bp TGGCTACATTCTTTGAGTTTAGAAAACGAGATAAAGAATTGCTCATATCTTCCCTATCCAGAACTGCCATaGAGAGGCCTGGAGTCCATG +
Preference number: 4 (lower is better)
Translates to: WLHSLSLENEIKNCSYLPYPELP*RGLESM
Trigger: CATGGACTCCAGGCCTCTGCATGGCAGTTCTGGATA...GGGAAGATATGAGCAATTCTTTATCTCGTTTTCTAAACTCAAAGAATGTAGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR GCA 90 bp TGCCATTACGCAGGATCTGAACCACCTACACGTACAGTGGTCTCATTCCAGTATACAAAATATAAACCCTaGAAACCTTATGTGCTACCT +
Preference number: 4 (lower is better)
Translates to: CHYAGSEPPTRTVVSFQYTKYKP*KPYVLP
Trigger: AGGTAGCACATAAGGTTTGCAGGGTTTATATTTTGT...ATACTGGAATGAGACCACTGTACGTGTAGGTGGTTCAGATCCTGCGTAATGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR CCA 90 bp GGTGTGGCTACATTCTTTGAGTTTAGAAAACGAGATAAAGAATTGCTCATATCTGCTGGGCTCCATCTCTaGGTTCCAGCTTTACCACAA +
Preference number: 4 (lower is better)
Translates to: GVATFFEFRKRDKELLISAGLHL*VPALPQ
Trigger: TTGTGGTAAAGCTGGAACCCAGAGATGGAGCCCAGC...AGATATGAGCAATTCTTTATCTCGTTTTCTAAACTCAAAGAATGTAGCCACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR CCA 90 bp CTGCTGGAACCAAAAAGCCATGAGAGGTACTGCTGTGATACACCTTACAAGCTATTTTCAGGACCTGTTTaGAATACAAGTTCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: LLEPKSHERYCCDTPYKLFSGPV*NTSSFP
Trigger: AGGGAAAGAACTTGTATTCCAAACAGGTCCTGAAAA...TAGCTTGTAAGGTGTATCACAGCAGTACCTCTCATGGCTTTTTGGTTCCAGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR CCA 90 bp TCTCTAATGGTACTGCATATGGTGTGTAATCCTAGGAACCCAGTTCAAGTGGTGCCAGATACTGGGCACTaGCATTCATGTAATAAAATC +
Preference number: 4 (lower is better)
Translates to: SLMVLHMVCNPRNPVQVVPDTGH*HSCNKI
Trigger: GATTTTATTACATGAATGCCAGTGCCCAGTATCTGG...CACCACTTGAACTGGGTTCCTAGGATTACACACCATATGCAGTACCATTAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR CCA 90 bp CTGCTGGAACCAAAAAGCCATGAGAGGTACTGCTGTGATACACCTTACAAGCTAACAAGAAAACAGCAATaGACAAACAGCGAAATGTCA +
Preference number: 4 (lower is better)
Translates to: LLEPKSHERYCCDTPYKLTRKQQ*TNSEMS
Trigger: TGACATTTCGCTGTTTGTCCATTGCTGTTTTCTTGT...TAGCTTGTAAGGTGTATCACAGCAGTACCTCTCATGGCTTTTTGGTTCCAGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR CCA 90 bp AAATGTCCAATCTGGGAACTTTTCCTTCAGAGCATCCAGTTGAGGGGATCTCTTAAGAAACACTCTCTTTaGCTTCGGATTAGCAGGATT +
Preference number: 4 (lower is better)
Translates to: KCPIWELFLQSIQLRGSLKKHSL*LRISRI
Trigger: AATCCTGCTAATCCGAAGCCAAAGAGAGTGTTTCTT...AAGAGATCCCCTCAACTGGATGCTCTGAAGGAAAAGTTCCCAGATTGGACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR CCA 90 bp CCACTGGGCATGTACTTAGAGCTCATCCACAAGATTAAAATACAAAGAGATCGTTCTTGGAGAAACTTCTaGGGCAGGAAGATACCAGTT +
Preference number: 4 (lower is better)
Translates to: PLGMYLELIHKIKIQRDRSWRNF*GRKIPV
Trigger: AACTGGTATCTTCCTGCCCCAGAAGTTTCTCCAAGA...ACGATCTCTTTGTATTTTAATCTTGTGGATGAGCTCTAAGTACATGCCCAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR CCA 90 bp TGCCATTACGCAGGATCTGAACCACCTACACGTACAGTGGTCTCATTCCAGTATGTTAAGGTCATGTACTaGCACAAACAATATTCTGAA +
Preference number: 4 (lower is better)
Translates to: CHYAGSEPPTRTVVSFQYVKVMY*HKQYSE
Trigger: TTCAGAATATTGTTTGTGCCAGTACATGACCTTAAC...ATACTGGAATGAGACCACTGTACGTGTAGGTGGTTCAGATCCTGCGTAATGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR TCA 90 bp CCACTGGGCATGTACTTAGAGCTCATCCACAAGATTAAAATACAAAGAGATCGTAGGGTGTTTAGCTGCTaGAACATAAGCTTGAACCAA +
Preference number: 4 (lower is better)
Translates to: PLGMYLELIHKIKIQRDRRVFSC*NISLNQ
Trigger: TTGGTTCAAGCTTATGTTTCAGCAGCTAAACACCCT...ACGATCTCTTTGTATTTTAATCTTGTGGATGAGCTCTAAGTACATGCCCAGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR TCA 90 bp CTGGCTGGAAAACAAAAAGATAGGCCCAGTGCATCAGTAAGATTATACCATGAACATGTAGTTTATGATTaGGCCAATACGAGAGGGGTA +
Preference number: 4 (lower is better)
Translates to: LAGKQKDRPSASVRLYHEHVVYD*ANTRGV
Trigger: TACCCCTCTCGTATTGGCTCAATCATAAACTACATG...TTCATGGTATAATCTTACTGATGCACTGGGCCTATCTTTTTGTTTTCCAGCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR TCA 90 bp ATTTCCTTCCAAGTCATGGAATGTTCTAGTCATATGCTGAAGAAACACTCTCTTCTCGGATACTATCATTaGTCTCAGGAATGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: ISFQVMECSSHMLKKHSLLGYYH*SQECEG
Trigger: CCCCTCACATTCCTGAGATCAATGATAGTATCCGAG...AAGAGAGTGTTTCTTCAGCATATGACTAGAACATTCCATGACTTGGAAGGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487088.5
CDS-3UTR TCA 90 bp ATTTCCTTCCAAGTCATGGAATGTTCTAGTCATATGCTGAAGAAACACTCTCTTGCATTCTCCTCACAGTaGGCTCGGATACTATCATTG +
Preference number: 4 (lower is better)
Translates to: ISFQVMECSSHMLKKHSLAFSSQ*ARILSL
Trigger: CAATGATAGTATCCGAGCTCACTGTGAGGAGAATGC...AAGAGAGTGTTTCTTCAGCATATGACTAGAACATTCCATGACTTGGAAGGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487088.5
CDS-3UTR TCA 90 bp CCACTGGGCATGTACTTAGAGCTCATCCACAAGATTAAAATACAAAGAGATCGTGATACCAGTTTTTCCTaGTCAGAAAGTGCACTGGAA +
Preference number: 4 (lower is better)
Translates to: PLGMYLELIHKIKIQRDRDTSFS*SESALE
Trigger: TTCCAGTGCACTTTCTGATCAGGAAAAACTGGTATC...ACGATCTCTTTGTATTTTAATCTTGTGGATGAGCTCTAAGTACATGCCCAGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR TCA 90 bp TCCAGTGACCTACACAGAGTTATATTCTCAAGGGGAATCATTACCTCAGTGAATTTCAGGATGTTCTTCTaGAACCTGCACTTCTATCCA +
Preference number: 4 (lower is better)
Translates to: SSDLHRVIFSRGIITSVNFRMFF*NLHFYP
Trigger: TGGATAGAAGTGCAGGTTTCAGAAGAACATCCTGAA...ATTCACTGAGGTAATGATTCCCCTTGAGAATATAACTCTGTGTAGGTCACTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
CDS-3UTR GCA 90 bp ATCCCAAGGTGTCTGTTCTTTGGATATGAGTCGGAAATGAGGAGGATTTCTTGGTCTTATGAAGGCTGTTaGTTTGCACTTCAATCAGTT +
Preference number: 4 (lower is better)
Translates to: IPRCLFFGYESEMRRISWSYEGC*FALQSV
Trigger: AACTGATTGAAGTGCAAAGCAACAGCCTTCATAAGA...CCAAGAAATCCTCCTCATTTCCGACTCATATCCAAAGAACAGACACCTTGGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487088.5
CDS-3UTR GCA 90 bp AAATGTCCAATCTGGGAACTTTTCCTTCAGAGCATCCAGTTGAGGGGATCTCTTAAGAGAGATGAACACTaGTATAATGAGAACGGTAAC +
Preference number: 4 (lower is better)
Translates to: KCPIWELFLQSIQLRGSLKRDEH*YNENGN
Trigger: GTTACCGTTCTCATTATAGCAGTGTTCATCTCTCTT...AAGAGATCCCCTCAACTGGATGCTCTGAAGGAAAAGTTCCCAGATTGGACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR GCA 90 bp TGGCTACATTCTTTGAGTTTAGAAAACGAGATAAAGAATTGCTCATATCTTCCCCCTTGGGCACCATGCTaGTTGAAGTCCTTATGCACA +
Preference number: 4 (lower is better)
Translates to: WLHSLSLENEIKNCSYLPPWAPC*LKSLCT
Trigger: TGTGCATAAGGACTTCAAGCAGCATGGTGCCCAAGG...GGGAAGATATGAGCAATTCTTTATCTCGTTTTCTAAACTCAAAGAATGTAGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR GCA 90 bp CTGGCTGGAAAACAAAAAGATAGGCCCAGTGCATCAGTAAGATTATACCATGAAAGAGTCCCGTTTAACTaGATTTCCTTCCAAGTCATG +
Preference number: 4 (lower is better)
Translates to: LAGKQKDRPSASVRLYHERVPFN*ISFQVM
Trigger: CATGACTTGGAAGGAAATGCAGTTAAACGGGACTCT...TTCATGGTATAATCTTACTGATGCACTGGGCCTATCTTTTTGTTTTCCAGCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR GCA 90 bp TGGCTACATTCTTTGAGTTTAGAAAACGAGATAAAGAATTGCTCATATCTTCCCACTTCTATCCAGAACTaGCATGCAGAGGCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: WLHSLSLENEIKNCSYLPTSIQN*HAEAWS
Trigger: ACTCCAGGCCTCTGCATGGCAGTTCTGGATAGAAGT...GGGAAGATATGAGCAATTCTTTATCTCGTTTTCTAAACTCAAAGAATGTAGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR CCA 90 bp CCACTGGGCATGTACTTAGAGCTCATCCACAAGATTAAAATACAAAGAGATCGTGCAATAAATTTTCCTTaGGCACCATGCTGCTTGAAG +
Preference number: 4 (lower is better)
Translates to: PLGMYLELIHKIKIQRDRAINFP*APCCLK
Trigger: CTTCAAGCAGCATGGTGCCCAAGGAAAATTTATTGC...ACGATCTCTTTGTATTTTAATCTTGTGGATGAGCTCTAAGTACATGCCCAGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489219.5
CDS-3UTR CCA 90 bp GATCTCAGGAATGTGAGGGGTTATGTGAGAAATTCCAGTATAATCAAACCCATTGGGAAATGTCCAATCTaGGAACTTTTCCTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: DLRNVRGYVRNSSIIKPIGKCPI*ELFLQS
Trigger: GCTCTGAAGGAAAAGTTCCCAGATTGGACATTTCCC...AATGGGTTTGATTATACTGGAATTTCTCACATAACCCCTCACATTCCTGAGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487088.5
CDS-3UTR TCA 90 bp TCCAGTGACCTACACAGAGTTATATTCTCAAGGGGAATCATTACCTCAGTGAATCAGTATCTGAAGGAATaGTTCCACTCTGAAAAACCT +
Preference number: 4 (lower is better)
Translates to: SSDLHRVIFSRGIITSVNQYLKE*FHSEKP
Trigger: AGGTTTTTCAGAGTGGAATCATTCCTTCAGATACTG...ATTCACTGAGGTAATGATTCCCCTTGAGAATATAACTCTGTGTAGGTCACTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
CDS-3UTR TCA 90 bp CCACTGGGCATGTACTTAGAGCTCATCCACAAGATTAAAATACAAAGAGATCGTTATAATCAAACCCATTaGTCCATATTCCAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: PLGMYLELIHKIKIQRDRYNQTH*SIFQSP
Trigger: GGGACTCTGGAATATGGATCAATGGGTTTGATTATA...ACGATCTCTTTGTATTTTAATCTTGTGGATGAGCTCTAAGTACATGCCCAGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR TCA 90 bp TGGCTACATTCTTTGAGTTTAGAAAACGAGATAAAGAATTGCTCATATCTTCCCGCATTCTCCTCACAGTaGGCTCGGATACTATCATTG +
Preference number: 4 (lower is better)
Translates to: WLHSLSLENEIKNCSYLPAFSSQ*ARILSL
Trigger: CAATGATAGTATCCGAGCTCACTGTGAGGAGAATGC...GGGAAGATATGAGCAATTCTTTATCTCGTTTTCTAAACTCAAAGAATGTAGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR TCA 90 bp GAGTATCCACTGGGCATGTACTTAGAGCTCATCCACAAGATTAAAATACAAAGATCTGTTCTTTGGATATaGGTCGGAAATGAGGAGGAT +
Preference number: 4 (lower is better)
Translates to: EYPLGMYLELIHKIKIQRSVLWI*VGNEED
Trigger: ATCCTCCTCATTTCCGACTCATATCCAAAGAACAGA...TCTTTGTATTTTAATCTTGTGGATGAGCTCTAAGTACATGCCCAGTGGATACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR TCA 90 bp TCCAGTGACCTACACAGAGTTATATTCTCAAGGGGAATCATTACCTCAGTGAATGCAATCACTTTCCAGTaGCCTACACAGAGTTATATT +
Preference number: 4 (lower is better)
Translates to: SSDLHRVIFSRGIITSVNAITFQ*PTQSYI
Trigger: AATATAACTCTGTGTAGGTCACTGGAAAGTGATTGC...ATTCACTGAGGTAATGATTCCCCTTGAGAATATAACTCTGTGTAGGTCACTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
CDS-3UTR GCA 90 bp TCCAGTGACCTACACAGAGTTATATTCTCAAGGGGAATCATTACCTCAGTGAATAAACATCTCAAATACTaGCCAGATGAGGTACAATGC +
Preference number: 4 (lower is better)
Translates to: SSDLHRVIFSRGIITSVNKHLKY*PDEVQC
Trigger: GCATTGTACCTCATCTGGGCAGTATTTGAGATGTTT...ATTCACTGAGGTAATGATTCCCCTTGAGAATATAACTCTGTGTAGGTCACTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
CDS-3UTR GCA 90 bp GAGTATCCACTGGGCATGTACTTAGAGCTCATCCACAAGATTAAAATACAAAGAAGAGTCCCGTTTAACTaGATTTCCTTCCAAGTCATG +
Preference number: 4 (lower is better)
Translates to: EYPLGMYLELIHKIKIQRRVPFN*ISFQVM
Trigger: CATGACTTGGAAGGAAATGCAGTTAAACGGGACTCT...TCTTTGTATTTTAATCTTGTGGATGAGCTCTAAGTACATGCCCAGTGGATACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR GCA 90 bp GATCTCAGGAATGTGAGGGGTTATGTGAGAAATTCCAGTATAATCAAACCCATTTGTTCTTCTGAAACCTaGACTTCTATCCAGAACTGC +
Preference number: 4 (lower is better)
Translates to: DLRNVRGYVRNSSIIKPICSSET*TSIQNC
Trigger: GCAGTTCTGGATAGAAGTGCAGGTTTCAGAAGAACA...AATGGGTTTGATTATACTGGAATTTCTCACATAACCCCTCACATTCCTGAGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487088.5
CDS-3UTR GCA 90 bp TCTCTAATGGTACTGCATATGGTGTGTAATCCTAGGAACCCAGTTCAAGTGGTGAAAATACAAATGATATaGCTATCTGCAGAGTCACTG +
Preference number: 4 (lower is better)
Translates to: SLMVLHMVCNPRNPVQVVKIQMI*LSAESL
Trigger: CAGTGACTCTGCAGATAGGCATATCATTTGTATTTT...CACCACTTGAACTGGGTTCCTAGGATTACACACCATATGCAGTACCATTAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR CCA 90 bp GTGGTGTGGCTACATTCTTTGAGTTTAGAAAACGAGATAAAGAATTGCTCATATTACAGCCAGCCAAAATaGATGCCAGCACAACATCAG +
Preference number: 4 (lower is better)
Translates to: VVWLHSLSLENEIKNCSYYSQPK*MPAQHQ
Trigger: CTGATGTTGTGCTGGCATCCATTTTGGCTGGCTGTA...ATATGAGCAATTCTTTATCTCGTTTTCTAAACTCAAAGAATGTAGCCACACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR CCA 90 bp TCCAGTGACCTACACAGAGTTATATTCTCAAGGGGAATCATTACCTCAGTGAATGAAGTGCCAAAAGACTaGCATTTTCAAGTGTCAACA +
Preference number: 4 (lower is better)
Translates to: SSDLHRVIFSRGIITSVNEVPKD*HFQVST
Trigger: TGTTGACACTTGAAAATGCCAGTCTTTTGGCACTTC...ATTCACTGAGGTAATGATTCCCCTTGAGAATATAACTCTGTGTAGGTCACTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
CDS-3UTR TCA 90 bp CTGGCTGGAAAACAAAAAGATAGGCCCAGTGCATCAGTAAGATTATACCATGAAGAATCATTACCTCAGTaGATGATATTTTACCCACCA +
Preference number: 4 (lower is better)
Translates to: LAGKQKDRPSASVRLYHEESLPQ*MIFYPP
Trigger: TGGTGGGTAAAATATCATTCACTGAGGTAATGATTC...TTCATGGTATAATCTTACTGATGCACTGGGCCTATCTTTTTGTTTTCCAGCCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR TCA 90 bp CCACTGGGCATGTACTTAGAGCTCATCCACAAGATTAAAATACAAAGAGATCGTGAATCATTACCTCAGTaGATGATATTTTACCCACCA +
Preference number: 4 (lower is better)
Translates to: PLGMYLELIHKIKIQRDRESLPQ*MIFYPP
Trigger: TGGTGGGTAAAATATCATTCACTGAGGTAATGATTC...ACGATCTCTTTGTATTTTAATCTTGTGGATGAGCTCTAAGTACATGCCCAGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489219.5
CDS-3UTR GCA 90 bp TCCAGTGACCTACACAGAGTTATATTCTCAAGGGGAATCATTACCTCAGTGAATAAGAGAGATGAACACTaGTATAATGAGAACGGTAAC +
Preference number: 4 (lower is better)
Translates to: SSDLHRVIFSRGIITSVNKRDEH*YNENGN
Trigger: GTTACCGTTCTCATTATAGCAGTGTTCATCTCTCTT...ATTCACTGAGGTAATGATTCCCCTTGAGAATATAACTCTGTGTAGGTCACTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
CDS-3UTR GCA 90 bp CTGGCTGGAAAACAAAAAGATAGGCCCAGTGCATCAGTAAGATTATACCATGAATATTTTGGCTACAGTTaGAGTTCCATACAGACAAAC +
Preference number: 4 (lower is better)
Translates to: LAGKQKDRPSASVRLYHEYFGYS*SSIQTN
Trigger: GTTTGTCTGTATGGAACTGCAACTGTAGCCAAAATA...TTCATGGTATAATCTTACTGATGCACTGGGCCTATCTTTTTGTTTTCCAGCCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR GCA 90 bp TGGCTACATTCTTTGAGTTTAGAAAACGAGATAAAGAATTGCTCATATCTTCCCAAAACCACAAAGAGGTaGATTCTCCTCACAGTGAGC +
Preference number: 4 (lower is better)
Translates to: WLHSLSLENEIKNCSYLPKTTKR*ILLTVS
Trigger: GCTCACTGTGAGGAGAATGCACCTCTTTGTGGTTTT...GGGAAGATATGAGCAATTCTTTATCTCGTTTTCTAAACTCAAAGAATGTAGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR GCA 90 bp GAGTATCCACTGGGCATGTACTTAGAGCTCATCCACAAGATTAAAATACAAAGAAGGCAGGCAGGCTGTTaGTTCAAAAGTCAATTTTAT +
Preference number: 4 (lower is better)
Translates to: EYPLGMYLELIHKIKIQRRQAGC*FKSQFY
Trigger: ATAAAATTGACTTTTGAAGCAACAGCCTGCCTGCCT...TCTTTGTATTTTAATCTTGTGGATGAGCTCTAAGTACATGCCCAGTGGATACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000489219.5
CDS-3UTR CCA 90 bp CCACTGGGCATGTACTTAGAGCTCATCCACAAGATTAAAATACAAAGAGATCGTTTTTCAGGACCTGTTTaGAATACAAGTTCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: PLGMYLELIHKIKIQRDRFSGPV*NTSSFP
Trigger: AGGGAAAGAACTTGTATTCCAAACAGGTCCTGAAAA...ACGATCTCTTTGTATTTTAATCTTGTGGATGAGCTCTAAGTACATGCCCAGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR CCA 90 bp GAGTATCCACTGGGCATGTACTTAGAGCTCATCCACAAGATTAAAATACAAAGACCGCTGTGTCATACTTaGTGTGATAAATGTATCCAT +
Preference number: 4 (lower is better)
Translates to: EYPLGMYLELIHKIKIQRPLCHT*CDKCIH
Trigger: ATGGATACATTTATCACACCAAGTATGACACAGCGG...TCTTTGTATTTTAATCTTGTGGATGAGCTCTAAGTACATGCCCAGTGGATACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR CCA 90 bp GAGTATCCACTGGGCATGTACTTAGAGCTCATCCACAAGATTAAAATACAAAGACACCTGCTCTCTGAATaGAATCTGTTAGAATTCTGT +
Preference number: 4 (lower is better)
Translates to: EYPLGMYLELIHKIKIQRHLLSE*NLLEFC
Trigger: ACAGAATTCTAACAGATTCCATTCAGAGAGCAGGTG...TCTTTGTATTTTAATCTTGTGGATGAGCTCTAAGTACATGCCCAGTGGATACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR CCA 90 bp GAGTATCCACTGGGCATGTACTTAGAGCTCATCCACAAGATTAAAATACAAAGACCAGATACTGGGCACTaGCATTCATGTAATAAAATC +
Preference number: 4 (lower is better)
Translates to: EYPLGMYLELIHKIKIQRPDTGH*HSCNKI
Trigger: GATTTTATTACATGAATGCCAGTGCCCAGTATCTGG...TCTTTGTATTTTAATCTTGTGGATGAGCTCTAAGTACATGCCCAGTGGATACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR CCA 90 bp GAGTATCCACTGGGCATGTACTTAGAGCTCATCCACAAGATTAAAATACAAAGAAAGAAACACTCTCTTTaGCTTCGGATTAGCAGGATT +
Preference number: 4 (lower is better)
Translates to: EYPLGMYLELIHKIKIQRKKHSL*LRISRI
Trigger: AATCCTGCTAATCCGAAGCCAAAGAGAGTGTTTCTT...TCTTTGTATTTTAATCTTGTGGATGAGCTCTAAGTACATGCCCAGTGGATACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR CCA 90 bp TGGCTACATTCTTTGAGTTTAGAAAACGAGATAAAGAATTGCTCATATCTTCCCAGAAACCATGTCACATaGAGTATCCACTGGGCATGT +
Preference number: 4 (lower is better)
Translates to: WLHSLSLENEIKNCSYLPRNHVT*SIHWAC
Trigger: ACATGCCCAGTGGATACTCCATGTGACATGGTTTCT...GGGAAGATATGAGCAATTCTTTATCTCGTTTTCTAAACTCAAAGAATGTAGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR CCA 90 bp GAGTATCCACTGGGCATGTACTTAGAGCTCATCCACAAGATTAAAATACAAAGAGAAGTGCCAAAAGACTaGCATTTTCAAGTGTCAACA +
Preference number: 4 (lower is better)
Translates to: EYPLGMYLELIHKIKIQREVPKD*HFQVST
Trigger: TGTTGACACTTGAAAATGCCAGTCTTTTGGCACTTC...TCTTTGTATTTTAATCTTGTGGATGAGCTCTAAGTACATGCCCAGTGGATACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000489219.5
CDS-3UTR TCA 90 bp GTGGTGTGGCTACATTCTTTGAGTTTAGAAAACGAGATAAAGAATTGCTCATATAGGGTGTTTAGCTGCTaGAACATAAGCTTGAACCAA +
Preference number: 4 (lower is better)
Translates to: VVWLHSLSLENEIKNCSYRVFSC*NISLNQ
Trigger: TTGGTTCAAGCTTATGTTTCAGCAGCTAAACACCCT...ATATGAGCAATTCTTTATCTCGTTTTCTAAACTCAAAGAATGTAGCCACACCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR TCA 90 bp ATTTCCTTCCAAGTCATGGAATGTTCTAGTCATATGCTGAAGAAACACTCTCTTCAGTATCTGAAGGAATaGTTCCACTCTGAAAAACCT +
Preference number: 4 (lower is better)
Translates to: ISFQVMECSSHMLKKHSLQYLKE*FHSEKP
Trigger: AGGTTTTTCAGAGTGGAATCATTCCTTCAGATACTG...AAGAGAGTGTTTCTTCAGCATATGACTAGAACATTCCATGACTTGGAAGGAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487088.5
CDS-3UTR TCA 90 bp AATGTGAGGGGTTATGTGAGAAATTCCAGTATAATCAAACCCATTGATCCATATGTTCTAGTCATATGCTaGAGAAACACTCTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: NVRGYVRNSSIIKPIDPYVLVIC*RNTLFG
Trigger: GCCAAAGAGAGTGTTTCTTCAGCATATGACTAGAAC...ATATGGATCAATGGGTTTGATTATACTGGAATTTCTCACATAACCCCTCACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487088.5
CDS-3UTR TCA 90 bp GTGGTGTGGCTACATTCTTTGAGTTTAGAAAACGAGATAAAGAATTGCTCATATTTCAGGATGTTCTTCTaGAACCTGCACTTCTATCCA +
Preference number: 4 (lower is better)
Translates to: VVWLHSLSLENEIKNCSYFRMFF*NLHFYP
Trigger: TGGATAGAAGTGCAGGTTTCAGAAGAACATCCTGAA...ATATGAGCAATTCTTTATCTCGTTTTCTAAACTCAAAGAATGTAGCCACACCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR GCA 90 bp GAGTATCCACTGGGCATGTACTTAGAGCTCATCCACAAGATTAAAATACAAAGATATTTTGGCTACAGTTaGAGTTCCATACAGACAAAC +
Preference number: 4 (lower is better)
Translates to: EYPLGMYLELIHKIKIQRYFGYS*SSIQTN
Trigger: GTTTGTCTGTATGGAACTGCAACTGTAGCCAAAATA...TCTTTGTATTTTAATCTTGTGGATGAGCTCTAAGTACATGCCCAGTGGATACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR GCA 90 bp TGGCTACATTCTTTGAGTTTAGAAAACGAGATAAAGAATTGCTCATATCTTCCCAGAGTCCCGTTTAACTaGATTTCCTTCCAAGTCATG +
Preference number: 4 (lower is better)
Translates to: WLHSLSLENEIKNCSYLPRVPFN*ISFQVM
Trigger: CATGACTTGGAAGGAAATGCAGTTAAACGGGACTCT...GGGAAGATATGAGCAATTCTTTATCTCGTTTTCTAAACTCAAAGAATGTAGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR GCA 90 bp TCCAGTGACCTACACAGAGTTATATTCTCAAGGGGAATCATTACCTCAGTGAATAATGCATACTTACTGTaGTCTTTCTATTCAGACAGA +
Preference number: 4 (lower is better)
Translates to: SSDLHRVIFSRGIITSVNNAYLL*SFYSDR
Trigger: TCTGTCTGAATAGAAAGAGCACAGTAAGTATGCATT...ATTCACTGAGGTAATGATTCCCCTTGAGAATATAACTCTGTGTAGGTCACTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR CCA 90 bp TGGCTACATTCTTTGAGTTTAGAAAACGAGATAAAGAATTGCTCATATCTTCCCGAAGGACATATGGCTTaGTCCTGTTGCTTCAAAAGT +
Preference number: 4 (lower is better)
Translates to: WLHSLSLENEIKNCSYLPEGHMA*SCCFKS
Trigger: ACTTTTGAAGCAACAGGACCAAGCCATATGTCCTTC...GGGAAGATATGAGCAATTCTTTATCTCGTTTTCTAAACTCAAAGAATGTAGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR TCA 90 bp TGGCTACATTCTTTGAGTTTAGAAAACGAGATAAAGAATTGCTCATATCTTCCCCAGTATCTGAAGGAATaGTTCCACTCTGAAAAACCT +
Preference number: 4 (lower is better)
Translates to: WLHSLSLENEIKNCSYLPQYLKE*FHSEKP
Trigger: AGGTTTTTCAGAGTGGAATCATTCCTTCAGATACTG...GGGAAGATATGAGCAATTCTTTATCTCGTTTTCTAAACTCAAAGAATGTAGCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR TCA 90 bp GTGGTGTGGCTACATTCTTTGAGTTTAGAAAACGAGATAAAGAATTGCTCATATCAAATACTGCCCAGATaGGGTACAATGCATAAAGAT +
Preference number: 4 (lower is better)
Translates to: VVWLHSLSLENEIKNCSYQILPR*GTMHKD
Trigger: ATCTTTATGCATTGTACCTCATCTGGGCAGTATTTG...ATATGAGCAATTCTTTATCTCGTTTTCTAAACTCAAAGAATGTAGCCACACCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR GCA 90 bp GTGGTGTGGCTACATTCTTTGAGTTTAGAAAACGAGATAAAGAATTGCTCATATAATGATATGCCTATCTaGAGAGTCACTGGGAGAAAT +
Preference number: 4 (lower is better)
Translates to: VVWLHSLSLENEIKNCSYNDMPI*RVTGRN
Trigger: ATTTCTCCCAGTGACTCTGCAGATAGGCATATCATT...ATATGAGCAATTCTTTATCTCGTTTTCTAAACTCAAAGAATGTAGCCACACCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR CCA 90 bp TGGCTACATTCTTTGAGTTTAGAAAACGAGATAAAGAATTGCTCATATCTTCCCCCGCTGTGTCATACTTaGTGTGATAAATGTATCCAT +
Preference number: 4 (lower is better)
Translates to: WLHSLSLENEIKNCSYLPPLCHT*CDKCIH
Trigger: ATGGATACATTTATCACACCAAGTATGACACAGCGG...GGGAAGATATGAGCAATTCTTTATCTCGTTTTCTAAACTCAAAGAATGTAGCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR CCA 90 bp TGGCTACATTCTTTGAGTTTAGAAAACGAGATAAAGAATTGCTCATATCTTCCCCACCTGCTCTCTGAATaGAATCTGTTAGAATTCTGT +
Preference number: 4 (lower is better)
Translates to: WLHSLSLENEIKNCSYLPHLLSE*NLLEFC
Trigger: ACAGAATTCTAACAGATTCCATTCAGAGAGCAGGTG...GGGAAGATATGAGCAATTCTTTATCTCGTTTTCTAAACTCAAAGAATGTAGCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR GCA 90 bp GTGGTGTGGCTACATTCTTTGAGTTTAGAAAACGAGATAAAGAATTGCTCATATTCTTATGAAGGCTGTTaGTTTGCACTTCAATCAGTT +
Preference number: 4 (lower is better)
Translates to: VVWLHSLSLENEIKNCSYSYEGC*FALQSV
Trigger: AACTGATTGAAGTGCAAAGCAACAGCCTTCATAAGA...ATATGAGCAATTCTTTATCTCGTTTTCTAAACTCAAAGAATGTAGCCACACCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR GCA 90 bp GTGGTGTGGCTACATTCTTTGAGTTTAGAAAACGAGATAAAGAATTGCTCATATAAGAGAGATGAACACTaGTATAATGAGAACGGTAAC +
Preference number: 4 (lower is better)
Translates to: VVWLHSLSLENEIKNCSYKRDEH*YNENGN
Trigger: GTTACCGTTCTCATTATAGCAGTGTTCATCTCTCTT...ATATGAGCAATTCTTTATCTCGTTTTCTAAACTCAAAGAATGTAGCCACACCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR GCA 90 bp GGTGTGGCTACATTCTTTGAGTTTAGAAAACGAGATAAAGAATTGCTCATATCTACAGCTCAGGTTAGTTaGAAAAGTTACACATCTTCT +
Preference number: 4 (lower is better)
Translates to: GVATFFEFRKRDKELLISTAQVS*KSYTSS
Trigger: AGAAGATGTGTAACTTTTGCAACTAACCTGAGCTGT...AGATATGAGCAATTCTTTATCTCGTTTTCTAAACTCAAAGAATGTAGCCACACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462592.5
3UTR CAA 72 bp ATTAAACTAACCCCTGTGGTGGTGTGGCTACATTCTTaGAGTTTAGAAAACGAGATAAAGAATTGCTCATAT +
Preference number: 4 (lower is better)
Translates to: IKLTPVVVWLHS*SLENEIKNCSY
Trigger: ATATGAGCAATTCTTTATCTCGTTTTCTAAACTCAAAGAATGTAGCCACACCACCACAGGGGTTAGTTTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR GCA 90 bp GGTGTGGCTACATTCTTTGAGTTTAGAAAACGAGATAAAGAATTGCTCATATCTATGGCTTGGTCCTGTTaGTTCAAAAGTCAATTTTAT +
Preference number: 4 (lower is better)
Translates to: GVATFFEFRKRDKELLISMAWSC*FKSQFY
Trigger: ATAAAATTGACTTTTGAAGCAACAGGACCAAGCCAT...AGATATGAGCAATTCTTTATCTCGTTTTCTAAACTCAAAGAATGTAGCCACACC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS GCA 90 bp CGCCGCTACCCCCGGGGCTCCTCTTCCGCGTCCTCCCGCCGCCGCTaGACCCATCCACCAGAGGCTCCTGCGCTCGGGCCTCCCTCTCCG +
Preference number: 5 (lower is better)
Translates to: RRYPRGSSSASSRRR*THPPEAPALGPPSP
Trigger: CGGAGAGGGAGGCCCGAGCGCAGGAGCCTCTGGTGGATGGGTGCAGCGGCGGCGGGAGGACGCGGAAGAGGAGCCCCGGGGGTAGCGGCG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000475005.1
ENST00000487088.5
ENST00000489219.5
CDS GCA 90 bp AGCGAGTCCCAGCGGTCCGGCAGGGGCGGGTGCACACAGGTGCGGTaGCCCGGAGCCTGCGCAGGAGCCGCAAACGGACGCGCGGGCCGT +
Preference number: 5 (lower is better)
Translates to: SESQRSGRGGCTQVR*PGACAGAANGRAGR
Trigger: ACGGCCCGCGCGTCCGTTTGCGGCTCCTGCGCAGGCTCCGGGGCACCGCACCTGTGTGCACCCGCCCCTGCCGGACCGCTGGGACTCGCT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487088.5
CDS GCA 90 bp GGGTCAGCGAGTCCCAGCGGTCCGGCAGGGGCGGGTGCACACAGGTaGGGTGCCCCGGAGCCTGCGCAGGAGCCGCAAACGGACGCGCGG +
Preference number: 5 (lower is better)
Translates to: GSASPSGPAGAGAHR*GAPEPAQEPQTDAR
Trigger: CCGCGCGTCCGTTTGCGGCTCCTGCGCAGGCTCCGGGGCACCGCACCTGTGTGCACCCGCCCCTGCCGGACCGCTGGGACTCGCTGACCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487088.5
CDS CCA 90 bp ACGGACGCGCGGGCCGTGCCAGGAGGGAGCGGCCGGTACCTGGCTTaGAGCGCGTCGAACTCCCCGCGGTGTCCAGCGGCCCCGCGTAGC +
Preference number: 5 (lower is better)
Translates to: TDARAVPGGSGRYLA*SASNSPRCPAAPRS
Trigger: GCTACGCGGGGCCGCTGGACACCGCGGGGAGTTCGACGCGCTCCAAGCCAGGTACCGGCCGCTCCCTCCTGGCACGGCCCGCGCGTCCGT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487088.5
CDS CCA 90 bp CGCAAACGGACGCGCGGGCCGTGCCAGGAGGGAGCGGCCGGTACCTaGCTTGGAGCGCGTCGAACTCCCCGCGGTGTCCAGCGGCCCCGC +
Preference number: 5 (lower is better)
Translates to: RKRTRGPCQEGAAGT*LGARRTPRGVQRPR
Trigger: GCGGGGCCGCTGGACACCGCGGGGAGTTCGACGCGCTCCAAGCCAGGTACCGGCCGCTCCCTCCTGGCACGGCCCGCGCGTCCGTTTGCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487088.5
CDS GCA 90 bp GTGCCCCGGAGCCTGCGCAGGAGCCGCAAACGGACGCGCGGGCCGTaGCAGGAGGGAGCGGCCGGTACCTGGCTTGGAGCGCGTCGAACT +
Preference number: 5 (lower is better)
Translates to: VPRSLRRSRKRTRGP*QEGAAGTWLGARRT
Trigger: AGTTCGACGCGCTCCAAGCCAGGTACCGGCCGCTCCCTCCTGGCACGGCCCGCGCGTCCGTTTGCGGCTCCTGCGCAGGCTCCGGGGCAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487088.5
CDS GCA 90 bp GGTGGCGCGGCCGCCGCTCCCTCTCGACGCTCTACTCCGACGCGGTaGCGCCTCACAGCAGCCGACTCAGAACCCCACTCCATGGCCACG +
Preference number: 5 (lower is better)
Translates to: GGAAAAPSRRSTPTR*RLTAADSEPHSMAT
Trigger: CGTGGCCATGGAGTGGGGTTCTGAGTCGGCTGCTGTGAGGCGGCACCGCGTCGGAGTAGAGCGTCGAGAGGGAGCGGCGGCCGCGCCACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000475005.1
ENST00000489219.5
CDS-3UTR CAA 90 bp GTCTTCCCCAGACAGATAGTGGGCAGCAATGGCCACGGTGACCATTCCTTCAGGAAGATAATCCCTGGCTaGGAGCGCGTCGAACTCCCC +
Preference number: 5 (lower is better)
Translates to: VFPRQIVGSNGHGDHSFRKIIPG*ERVELP
Trigger: GGGGAGTTCGACGCGCTCCAAGCCAGGGATTATCTT...CCTGAAGGAATGGTCACCGTGGCCATTGCTGCCCACTATCTGTCTGGGGAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489219.5
CDS-3UTR CAA 90 bp AAACCATGTCACATGGAGTATCCACTGGGCATGTACTTAGAGCTCATCCACAAGCGGCCGGTACCTGGCTaGGAGCGCGTCGAACTCCCC +
Preference number: 5 (lower is better)
Translates to: KPCHMEYPLGMYLELIHKRPVPG*ERVELP
Trigger: GGGGAGTTCGACGCGCTCCAAGCCAGGTACCGGCCG...CTTGTGGATGAGCTCTAAGTACATGCCCAGTGGATACTCCATGTGACATGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487088.5
CDS-3UTR CAA 90 bp AAACACTCCTTCTACAGCTTCCTGAGACAGCAGGCTGGCTTGTGGCCCCCTGGGTGGCACCTGGTGAGTTaGCTACTGAGTCAAAATGAC +
Preference number: 5 (lower is better)
Translates to: KHSFYSFLRQQAGLWPPGWHLVS*LLSQND
Trigger: GTCATTTTGACTCAGTAGCAAACTCACCAGGTGCCA...CCCAGGGGGCCACAAGCCAGCCTGCTGTCTCAGGAAGCTGTAGAAGGAGTGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR CAA 90 bp TCAAGTGTCAACAGGCCATGCATCACTGCGCCACAGCTAAACCCTTATAGTGCTAAGATAATCCCTGGCTaGGAGCGCGTCGAACTCCCC +
Preference number: 5 (lower is better)
Translates to: SSVNRPCITAPQLNPYSAKIIPG*ERVELP
Trigger: GGGGAGTTCGACGCGCTCCAAGCCAGGGATTATCTT...AGCACTATAAGGGTTTAGCTGTGGCGCAGTGATGCATGGCCTGTTGACACTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
CDS-3UTR CAA 90 bp CATCCACGTAACATAGGGAGAAACCATGTCACATGGAGTATCCACTGGGCATGTAAGATAATCCCTGGCTaGGAGCGCGTCGAACTCCCC +
Preference number: 5 (lower is better)
Translates to: HPRNIGRNHVTWSIHWACKIIPG*ERVELP
Trigger: GGGGAGTTCGACGCGCTCCAAGCCAGGGATTATCTT...ACATGCCCAGTGGATACTCCATGTGACATGGTTTCTCCCTATGTTACGTGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000489219.5
CDS-3UTR CAA 90 bp GAACTGCCATGCAGAGGCCTGGAGTCCATGGGAGTAAAAGACAAAGTAGTCTCCCGCCGAGCAAAGTCCTaGGTAAGTGAGGGTAACAAG +
Preference number: 5 (lower is better)
Translates to: ELPCRGLESMGVKDKVVSRRAKS*VSEGNK
Trigger: CTTGTTACCCTCACTTACCAAGGACTTTGCTCGGCG...GGAGACTACTTTGTCTTTTACTCCCATGGACTCCAGGCCTCTGCATGGCAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR CAA 90 bp GCACACCCAGGCAGAGGGAAATGTCCAATCTGGGAACTTTTCCTTCAGAGCATCTGGGCACCATGCTGCTaGAAGTCCTTATGCACACAG +
Preference number: 5 (lower is better)
Translates to: AHPGRGKCPIWELFLQSIWAPCC*KSLCTQ
Trigger: CTGTGTGCATAAGGACTTCAAGCAGCATGGTGCCCA...GATGCTCTGAAGGAAAAGTTCCCAGATTGGACATTTCCCTCTGCCTGGGTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489219.5
CDS-3UTR CAA 90 bp CCATTGGCTCTGGAGAATCTGAGACACCTCCATCCACACCCACAGCTCAGGTTAAATGAGGAGGATTTCTaGGAGAAACTTCTGGGGCAG +
Preference number: 5 (lower is better)
Translates to: PLALENLRHLHPHPQLRLNEEDF*EKLLGQ
Trigger: CTGCCCCAGAAGTTTCTCCAAGAAATCCTCCTCATT...TAACCTGAGCTGTGGGTGTGGATGGAGGTGTCTCAGATTCTCCAGAGCCAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR CAA 90 bp GAACTGCCATGCAGAGGCCTGGAGTCCATGGGAGTAAAAGACAAAGTAGTCTCCCTTCAGAGCATCCAGTaGAGGGGATCTCTTGTCTTC +
Preference number: 5 (lower is better)
Translates to: ELPCRGLESMGVKDKVVSLQSIQ*RGSLVF
Trigger: GAAGACAAGAGATCCCCTCAACTGGATGCTCTGAAG...GGAGACTACTTTGTCTTTTACTCCCATGGACTCCAGGCCTCTGCATGGCAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR CAA 90 bp ACACTCCTTCTACAGCTTCCTGAGACAGCAGGCTGGCTTGTGGCCCCCTGGGTGAGTGGATTGTTGGCTTaGTCCTTAAGGTCATATAAA +
Preference number: 5 (lower is better)
Translates to: TLLLQLPETAGWLVAPWVSGLLA*SLRSYK
Trigger: TTTATATGACCTTAAGGACAAAGCCAACAATCCACT...CACCCAGGGGGCCACAAGCCAGCCTGCTGTCTCAGGAAGCTGTAGAAGGAGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR CAA 90 bp AAACACTCCTTCTACAGCTTCCTGAGACAGCAGGCTGGCTTGTGGCCCCCTGGGCATGAAGGACTAACCTaGTATAACACAAGACTCCTA +
Preference number: 5 (lower is better)
Translates to: KHSFYSFLRQQAGLWPPGHEGLT*YNTRLL
Trigger: TAGGAGTCTTGTGTTATACAAGGTTAGTCCTTCATG...CCCAGGGGGCCACAAGCCAGCCTGCTGTCTCAGGAAGCTGTAGAAGGAGTGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR CAA 90 bp CTGCCATGCAGAGGCCTGGAGTCCATGGGAGTAAAAGACAAAGTAGTCTCCTCCTGGCACCTGGTGAGTTaGCTACTGAGTCAAAATGAC +
Preference number: 5 (lower is better)
Translates to: LPCRGLESMGVKDKVVSSWHLVS*LLSQND
Trigger: GTCATTTTGACTCAGTAGCAAACTCACCAGGTGCCA...GGAGGAGACTACTTTGTCTTTTACTCCCATGGACTCCAGGCCTCTGCATGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR CAA 90 bp AAACACTCCTTCTACAGCTTCCTGAGACAGCAGGCTGGCTTGTGGCCCCCTGGGATGAAGGCTGTTGCTTaGCACTTCAATCAGTTTAAT +
Preference number: 5 (lower is better)
Translates to: KHSFYSFLRQQAGLWPPGMKAVA*HFNQFN
Trigger: ATTAAACTGATTGAAGTGCAAAGCAACAGCCTTCAT...CCCAGGGGGCCACAAGCCAGCCTGCTGTCTCAGGAAGCTGTAGAAGGAGTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR CAA 90 bp AAACACTCCTTCTACAGCTTCCTGAGACAGCAGGCTGGCTTGTGGCCCCCTGGGTTATTTTGGCTACAGTaGCAGTTCCATACAGACAAA +
Preference number: 5 (lower is better)
Translates to: KHSFYSFLRQQAGLWPPGLFWLQ*QFHTDK
Trigger: TTTGTCTGTATGGAACTGCAACTGTAGCCAAAATAA...CCCAGGGGGCCACAAGCCAGCCTGCTGTCTCAGGAAGCTGTAGAAGGAGTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR CAA 90 bp ACCCAGGCAGAGGGAAATGTCCAATCTGGGAACTTTTCCTTCAGAGCATCCAGTCTTCAGAGCATCCAGTaGAGGGGATCTCTTGTCTTC +
Preference number: 5 (lower is better)
Translates to: TQAEGNVQSGNFSFRASSLQSIQ*RGSLVF
Trigger: GAAGACAAGAGATCCCCTCAACTGGATGCTCTGAAG...ACTGGATGCTCTGAAGGAAAAGTTCCCAGATTGGACATTTCCCTCTGCCTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR CAA 90 bp CTGCCATGCAGAGGCCTGGAGTCCATGGGAGTAAAAGACAAAGTAGTCTCCTCCCAGTGTACATCTTTCTaGATCCTAAAGGGGCAGCTA +
Preference number: 5 (lower is better)
Translates to: LPCRGLESMGVKDKVVSSQCTSF*ILKGQL
Trigger: TAGCTGCCCCTTTAGGATCAAGAAAGATGTACACTG...GGAGGAGACTACTTTGTCTTTTACTCCCATGGACTCCAGGCCTCTGCATGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489219.5
CDS-3UTR CAA 90 bp GCACACCCAGGCAGAGGGAAATGTCCAATCTGGGAACTTTTCCTTCAGAGCATCTGGCACCTGGTGAGTTaGCTACTGAGTCAAAATGAC +
Preference number: 5 (lower is better)
Translates to: AHPGRGKCPIWELFLQSIWHLVS*LLSQND
Trigger: GTCATTTTGACTCAGTAGCAAACTCACCAGGTGCCA...GATGCTCTGAAGGAAAAGTTCCCAGATTGGACATTTCCCTCTGCCTGGGTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS TCA 90 bp GCCCAGGTACAAAACAACACCCATTACCACCATGTAGTTTATGATTaGGCCAATACGAGAGGGGTAGGCAATGACAAACAGGCCCAGCAC +
Preference number: 5 (lower is better)
Translates to: AQVQNNTHYHHVVYD*ANTRGVGNDKQAQH
Trigger: GTGCTGGGCCTGTTTGTCATTGCCTACCCCTCTCGTATTGGCTCAATCATAAACTACATGGTGGTAATGGGTGTTGTTTTGTACCTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000214893.9
ENST00000339450.10
ENST00000462592.5
ENST00000487088.5
ENST00000489219.5
CDS-3UTR CAA 90 bp CAGCCCTATGGCAATCACTTTCCAGTGACCTACACAGAGTTATATTCTCAAGGGCGCCGAGCAAAGTCCTaGGTAAGTGAGGGTAACAAG +
Preference number: 5 (lower is better)
Translates to: QPYGNHFPVTYTELYSQGRRAKS*VSEGNK
Trigger: CTTGTTACCCTCACTTACCAAGGACTTTGCTCGGCG...CCCTTGAGAATATAACTCTGTGTAGGTCACTGGAAAGTGATTGCCATAGGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
CDS-3UTR CAA 90 bp CTGCCATGCAGAGGCCTGGAGTCCATGGGAGTAAAAGACAAAGTAGTCTCCTCCAGCAATAAATTTTCCTaGGGCACCATGCTGCTTGAA +
Preference number: 5 (lower is better)
Translates to: LPCRGLESMGVKDKVVSSSNKFS*GTMLLE
Trigger: TTCAAGCAGCATGGTGCCCAAGGAAAATTTATTGCT...GGAGGAGACTACTTTGTCTTTTACTCCCATGGACTCCAGGCCTCTGCATGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489219.5
CDS-3UTR CAA 90 bp GGAGAAACCATGTCACATGGAGTATCCACTGGGCATGTACTTAGAGCTCATCCAACCACTGAGAAAGTGTaGACCCTTTGTGGGCTCGAA +
Preference number: 5 (lower is better)
Translates to: GETMSHGVSTGHVLRAHPTTEKV*TLCGLE
Trigger: TTCGAGCCCACAAAGGGTCAACACTTTCTCAGTGGT...TGGATGAGCTCTAAGTACATGCCCAGTGGATACTCCATGTGACATGGTTTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000487088.5
ENST00000489219.5
CDS-3UTR CAA 90 bp CATCCACGTAACATAGGGAGAAACCATGTCACATGGAGTATCCACTGGGCATGTCTTCAGAGCATCCAGTaGAGGGGATCTCTTGTCTTC +
Preference number: 5 (lower is better)
Translates to: HPRNIGRNHVTWSIHWACLQSIQ*RGSLVF
Trigger: GAAGACAAGAGATCCCCTCAACTGGATGCTCTGAAG...ACATGCCCAGTGGATACTCCATGTGACATGGTTTCTCCCTATGTTACGTGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000487088.5
ENST00000489219.5
CDS-3UTR CAA 90 bp GTCTTCCCCAGACAGATAGTGGGCAGCAATGGCCACGGTGACCATTCCTTCAGGAGTGGATTGTTGGCTTaGTCCTTAAGGTCATATAAA +
Preference number: 5 (lower is better)
Translates to: VFPRQIVGSNGHGDHSFRSGLLA*SLRSYK
Trigger: TTTATATGACCTTAAGGACAAAGCCAACAATCCACT...CCTGAAGGAATGGTCACCGTGGCCATTGCTGCCCACTATCTGTCTGGGGAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489219.5
CDS-3UTR CAA 90 bp AAACCATGTCACATGGAGTATCCACTGGGCATGTACTTAGAGCTCATCCACAAGGTTATTCAGCTCTGGTaGCAGCCCCATCTACATGGG +
Preference number: 5 (lower is better)
Translates to: KPCHMEYPLGMYLELIHKVIQLW*QPHLHG
Trigger: CCCATGTAGATGGGGCTGCAACCAGAGCTGAATAAC...CTTGTGGATGAGCTCTAAGTACATGCCCAGTGGATACTCCATGTGACATGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR CAA 90 bp TCAAGTGTCAACAGGCCATGCATCACTGCGCCACAGCTAAACCCTTATAGTGCTGAAACCATGACTGGCTaGCAAGACATTTTCCTCAGC +
Preference number: 5 (lower is better)
Translates to: SSVNRPCITAPQLNPYSAETMTG*QDIFLS
Trigger: GCTGAGGAAAATGTCTTGCAAGCCAGTCATGGTTTC...AGCACTATAAGGGTTTAGCTGTGGCGCAGTGATGCATGGCCTGTTGACACTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
CDS CCA 90 bp AATCATTGTACAGCCAGCCAAAATGGATGCCAGCACAACATCAGGTaGGATTTCAGAACCACTTCTCCCGAGGATAGGGGTAAACATCTC +
Preference number: 5 (lower is better)
Translates to: NHCTASQNGCQHNIR*DFRTTSPEDRGKHL
Trigger: GAGATGTTTACCCCTATCCTCGGGAGAAGTGGTTCTGAAATCCCACCTGATGTTGTGCTGGCATCCATTTTGGCTGGCTGTACAATGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000214893.9
ENST00000339450.10
ENST00000462592.5
ENST00000489219.5
CDS-3UTR CAA 90 bp TCTCTAATGGTACTGCATATGGTGTGTAATCCTAGGAACCCAGTTCAAGTGGTGTGGGCACCATGCTGCTaGAAGTCCTTATGCACACAG +
Preference number: 5 (lower is better)
Translates to: SLMVLHMVCNPRNPVQVVWAPCC*KSLCTQ
Trigger: CTGTGTGCATAAGGACTTCAAGCAGCATGGTGCCCA...CACCACTTGAACTGGGTTCCTAGGATTACACACCATATGCAGTACCATTAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR CAA 90 bp TCAAGTGTCAACAGGCCATGCATCACTGCGCCACAGCTAAACCCTTATAGTGCTAGAAGGACATATGGCTaGGTCCTGTTGCTTCAAAAG +
Preference number: 5 (lower is better)
Translates to: SSVNRPCITAPQLNPYSARRTYG*VLLLQK
Trigger: CTTTTGAAGCAACAGGACCAAGCCATATGTCCTTCT...AGCACTATAAGGGTTTAGCTGTGGCGCAGTGATGCATGGCCTGTTGACACTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR CAA 90 bp TACGCAGGATCTGAACCACCTACACGTACAGTGGTCTCATTCCAGTATAAGCCAGAAACCATGACTGGCTaGCAAGACATTTTCCTCAGC +
Preference number: 5 (lower is better)
Translates to: YAGSEPPTRTVVSFQYKPETMTG*QDIFLS
Trigger: GCTGAGGAAAATGTCTTGCAAGCCAGTCATGGTTTC...TGGCTTATACTGGAATGAGACCACTGTACGTGTAGGTGGTTCAGATCCTGCGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR CAA 90 bp TCAAGTGTCAACAGGCCATGCATCACTGCGCCACAGCTAAACCCTTATAGTGCTAGCAATAAATTTTCCTaGGGCACCATGCTGCTTGAA +
Preference number: 5 (lower is better)
Translates to: SSVNRPCITAPQLNPYSASNKFS*GTMLLE
Trigger: TTCAAGCAGCATGGTGCCCAAGGAAAATTTATTGCT...AGCACTATAAGGGTTTAGCTGTGGCGCAGTGATGCATGGCCTGTTGACACTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
CDS-3UTR CAA 90 bp CAGCCCTATGGCAATCACTTTCCAGTGACCTACACAGAGTTATATTCTCAAGGGAGGACGAGAGAATCATaGTACAGCCAGCCAAAATGG +
Preference number: 5 (lower is better)
Translates to: QPYGNHFPVTYTELYSQGRTRES*YSQPKW
Trigger: CCATTTTGGCTGGCTGTACAATGATTCTCTCGTCCT...CCCTTGAGAATATAACTCTGTGTAGGTCACTGGAAAGTGATTGCCATAGGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
CDS-3UTR CAA 90 bp ATGGAAGTCCCTGCAGTAAGTAGGCAACATGCTACCCTTCTATTCAACACAGCAAGGACGAGAGAATCATaGTACAGCCAGCCAAAATGG +
Preference number: 5 (lower is better)
Translates to: MEVPAVSRQHATLLFNTARTRES*YSQPKW
Trigger: CCATTTTGGCTGGCTGTACAATGATTCTCTCGTCCT...TGCTGTGTTGAATAGAAGGGTAGCATGTTGCCTACTTACTGCAGGGACTTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR CAA 90 bp CAGCCCTATGGCAATCACTTTCCAGTGACCTACACAGAGTTATATTCTCAAGGGAATGAGGAGGATTTCTaGGAGAAACTTCTGGGGCAG +
Preference number: 5 (lower is better)
Translates to: QPYGNHFPVTYTELYSQGNEEDF*EKLLGQ
Trigger: CTGCCCCAGAAGTTTCTCCAAGAAATCCTCCTCATT...CCCTTGAGAATATAACTCTGTGTAGGTCACTGGAAAGTGATTGCCATAGGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
CDS-3UTR CAA 90 bp GAGACCACTGAGAAAGTGTTGACCCTTTGTGGGCTCGAACATAGAAGGACATATAATGAGGAGGATTTCTaGGAGAAACTTCTGGGGCAG +
Preference number: 5 (lower is better)
Translates to: ETTEKVLTLCGLEHRRTYNEEDF*EKLLGQ
Trigger: CTGCCCCAGAAGTTTCTCCAAGAAATCCTCCTCATT...ATATGTCCTTCTATGTTCGAGCCCACAAAGGGTCAACACTTTCTCAGTGGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487088.5
CDS-3UTR CAA 90 bp GGAGAAACCATGTCACATGGAGTATCCACTGGGCATGTACTTAGAGCTCATCCAAGAAGGACATATGGCTaGGTCCTGTTGCTTCAAAAG +
Preference number: 5 (lower is better)
Translates to: GETMSHGVSTGHVLRAHPRRTYG*VLLLQK
Trigger: CTTTTGAAGCAACAGGACCAAGCCATATGTCCTTCT...TGGATGAGCTCTAAGTACATGCCCAGTGGATACTCCATGTGACATGGTTTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000487088.5
CDS-3UTR CAA 90 bp CATCCACGTAACATAGGGAGAAACCATGTCACATGGAGTATCCACTGGGCATGTCAGTGTACATCTTTCTaGATCCTAAAGGGGCAGCTA +
Preference number: 5 (lower is better)
Translates to: HPRNIGRNHVTWSIHWACQCTSF*ILKGQL
Trigger: TAGCTGCCCCTTTAGGATCAAGAAAGATGTACACTG...ACATGCCCAGTGGATACTCCATGTGACATGGTTTCTCCCTATGTTACGTGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
CDS-3UTR CAA 90 bp TGGGCCCAGTTAGTTTTTAGGGAGTCACAGATTAGGCAGGCAACGAGGGGCATGATCTTACTACTGACCTaGTACAATACCAAAGCTTCA +
Preference number: 5 (lower is better)
Translates to: WAQLVFRESQIRQATRGMILLLT*YNTKAS
Trigger: TGAAGCTTTGGTATTGTACAAGGTCAGTAGTAAGAT...CATGCCCCTCGTTGCCTGCCTAATCTGTGACTCCCTAAAAACTAACTGGGCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR CAA 90 bp ATGGAAGTCCCTGCAGTAAGTAGGCAACATGCTACCCTTCTATTCAACACAGCATGGCACCTGGTGAGTTaGCTACTGAGTCAAAATGAC +
Preference number: 5 (lower is better)
Translates to: MEVPAVSRQHATLLFNTAWHLVS*LLSQND
Trigger: GTCATTTTGACTCAGTAGCAAACTCACCAGGTGCCA...TGCTGTGTTGAATAGAAGGGTAGCATGTTGCCTACTTACTGCAGGGACTTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS GCA 90 bp AATAAAATAGGACGAGAGAATCATTGTACAGCCAGCCAAAATGGATaGCAGCACAACATCAGGTGGGATTTCAGAACCACTTCTCCCGAG +
Preference number: 5 (lower is better)
Translates to: NKIGRENHCTASQNG*QHNIRWDFRTTSPE
Trigger: CTCGGGAGAAGTGGTTCTGAAATCCCACCTGATGTTGTGCTGGCATCCATTTTGGCTGGCTGTACAATGATTCTCTCGTCCTATTTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000214893.9
ENST00000339450.10
ENST00000462592.5
ENST00000489219.5
CDS-3UTR CAA 90 bp TCCAGTGACCTACACAGAGTTATATTCTCAAGGGGAATCATTACCTCAGTGAATTGGGCACCATGCTGCTaGAAGTCCTTATGCACACAG +
Preference number: 5 (lower is better)
Translates to: SSDLHRVIFSRGIITSVNWAPCC*KSLCTQ
Trigger: CTGTGTGCATAAGGACTTCAAGCAGCATGGTGCCCA...ATTCACTGAGGTAATGATTCCCCTTGAGAATATAACTCTGTGTAGGTCACTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
CDS-3UTR CAA 90 bp AAATGTCCAATCTGGGAACTTTTCCTTCAGAGCATCCAGTTGAGGGGATCTCTTAATGAGGAGGATTTCTaGGAGAAACTTCTGGGGCAG +
Preference number: 5 (lower is better)
Translates to: KCPIWELFLQSIQLRGSLNEEDF*EKLLGQ
Trigger: CTGCCCCAGAAGTTTCTCCAAGAAATCCTCCTCATT...AAGAGATCCCCTCAACTGGATGCTCTGAAGGAAAAGTTCCCAGATTGGACATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR CAA 90 bp GAGACCACTGAGAAAGTGTTGACCCTTTGTGGGCTCGAACATAGAAGGACATATAGAAGGACATATGGCTaGGTCCTGTTGCTTCAAAAG +
Preference number: 5 (lower is better)
Translates to: ETTEKVLTLCGLEHRRTYRRTYG*VLLLQK
Trigger: CTTTTGAAGCAACAGGACCAAGCCATATGTCCTTCT...ATATGTCCTTCTATGTTCGAGCCCACAAAGGGTCAACACTTTCTCAGTGGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487088.5
CDS-3UTR CAA 90 bp CAGCCCTATGGCAATCACTTTCCAGTGACCTACACAGAGTTATATTCTCAAGGGAGAGACAAAGCACATTaGAGAGGCTGCCTGAAGAAA +
Preference number: 5 (lower is better)
Translates to: QPYGNHFPVTYTELYSQGRDKAH*RGCLKK
Trigger: TTTCTTCAGGCAGCCTCTCAAATGTGCTTTGTCTCT...CCCTTGAGAATATAACTCTGTGTAGGTCACTGGAAAGTGATTGCCATAGGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR CAA 90 bp TCTCTAATGGTACTGCATATGGTGTGTAATCCTAGGAACCCAGTTCAAGTGGTGGAAACCATGACTGGCTaGCAAGACATTTTCCTCAGC +
Preference number: 5 (lower is better)
Translates to: SLMVLHMVCNPRNPVQVVETMTG*QDIFLS
Trigger: GCTGAGGAAAATGTCTTGCAAGCCAGTCATGGTTTC...CACCACTTGAACTGGGTTCCTAGGATTACACACCATATGCAGTACCATTAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR CAA 90 bp GGAGAAACCATGTCACATGGAGTATCCACTGGGCATGTACTTAGAGCTCATCCAGATTTCTTAAAGCCATaGGCTCTGGAGAATCTGAGA +
Preference number: 5 (lower is better)
Translates to: GETMSHGVSTGHVLRAHPDFLKP*ALENLR
Trigger: TCTCAGATTCTCCAGAGCCAATGGCTTTAAGAAATC...TGGATGAGCTCTAAGTACATGCCCAGTGGATACTCCATGTGACATGGTTTCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR CAA 90 bp CCTAGGAACCCAGTTCAAGTGGTGGATTTGAGTTCTTCAGGAATCGAAGCATCAACACCAGAAGAGTACTaGCCTCGCTTTTCCTTGTAT +
Preference number: 5 (lower is better)
Translates to: PRNPVQVVDLSSSGIEASTPEEY*PRFSLY
Trigger: ATACAAGGAAAAGCGAGGCAAGTACTCTTCTGGTGT...TGATGCTTCGATTCCTGAAGAACTCAAATCCACCACTTGAACTGGGTTCCTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS TCA 90 bp TCCTGGAATGTTCCCAAAATCCCTGTAGATACGAAAGTCAGTATCTaGAGGAATGATTCCACTCTGAAAAACCTCCTGAGCCACCACAGA +
Preference number: 5 (lower is better)
Translates to: SWNVPKIPVDTKVSI*RNDSTLKNLLSHHR
Trigger: TCTGTGGTGGCTCAGGAGGTTTTTCAGAGTGGAATCATTCCTTCAGATACTGACTTTCGTATCTACAGGGATTTTGGGAACATTCCAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000214893.9
ENST00000339450.10
ENST00000462592.5
ENST00000487088.5
ENST00000489219.5
CDS TCA 90 bp ACCTGGAATGTTCCCAAAATCCCTGTAGATACGAAAGTCAGTATCTaGAGGAATGATTCCACTCTGAAAAACCTCCTGAGCCACCACAGA +
Preference number: 5 (lower is better)
Translates to: TWNVPKIPVDTKVSI*RNDSTLKNLLSHHR
Trigger: TCTGTGGTGGCTCAGGAGGTTTTTCAGAGTGGAATCATTCCTTCAGATACTGACTTTCGTATCTACAGGGATTTTGGGAACATTCCAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475005.1
CDS-3UTR CAA 90 bp GAGTATCCACTGGGCATGTACTTAGAGCTCATCCACAAGATTAAAATACAAAGACGCCGAGCAAAGTCCTaGGTAAGTGAGGGTAACAAG +
Preference number: 5 (lower is better)
Translates to: EYPLGMYLELIHKIKIQRRRAKS*VSEGNK
Trigger: CTTGTTACCCTCACTTACCAAGGACTTTGCTCGGCG...TCTTTGTATTTTAATCTTGTGGATGAGCTCTAAGTACATGCCCAGTGGATACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR CAA 90 bp ATGGAAGTCCCTGCAGTAAGTAGGCAACATGCTACCCTTCTATTCAACACAGCAAGCAATAAATTTTCCTaGGGCACCATGCTGCTTGAA +
Preference number: 5 (lower is better)
Translates to: MEVPAVSRQHATLLFNTASNKFS*GTMLLE
Trigger: TTCAAGCAGCATGGTGCCCAAGGAAAATTTATTGCT...TGCTGTGTTGAATAGAAGGGTAGCATGTTGCCTACTTACTGCAGGGACTTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR CAA 90 bp CTGGCTGGAAAACAAAAAGATAGGCCCAGTGCATCAGTAAGATTATACCATGAAACCACTGAGAAAGTGTaGACCCTTTGTGGGCTCGAA +
Preference number: 5 (lower is better)
Translates to: LAGKQKDRPSASVRLYHETTEKV*TLCGLE
Trigger: TTCGAGCCCACAAAGGGTCAACACTTTCTCAGTGGT...TTCATGGTATAATCTTACTGATGCACTGGGCCTATCTTTTTGTTTTCCAGCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR CAA 90 bp TCCAGTGACCTACACAGAGTTATATTCTCAAGGGGAATCATTACCTCAGTGAATACCACTGAGAAAGTGTaGACCCTTTGTGGGCTCGAA +
Preference number: 5 (lower is better)
Translates to: SSDLHRVIFSRGIITSVNTTEKV*TLCGLE
Trigger: TTCGAGCCCACAAAGGGTCAACACTTTCTCAGTGGT...ATTCACTGAGGTAATGATTCCCCTTGAGAATATAACTCTGTGTAGGTCACTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
CDS-3UTR CAA 90 bp CTGGCTGGAAAACAAAAAGATAGGCCCAGTGCATCAGTAAGATTATACCATGAAGCAGGAGCCAGACTCTaGAAGCACTTGAGACTGATT +
Preference number: 5 (lower is better)
Translates to: LAGKQKDRPSASVRLYHEAGARL*KHLRLI
Trigger: AATCAGTCTCAAGTGCTTCAAGAGTCTGGCTCCTGC...TTCATGGTATAATCTTACTGATGCACTGGGCCTATCTTTTTGTTTTCCAGCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR CAA 90 bp CATCCACGTAACATAGGGAGAAACCATGTCACATGGAGTATCCACTGGGCATGTACCAGTGACAAGAAATaGACAAACACTCCTTCTACA +
Preference number: 5 (lower is better)
Translates to: HPRNIGRNHVTWSIHWACTSDKK*TNTPST
Trigger: TGTAGAAGGAGTGTTTGTCAATTTCTTGTCACTGGT...ACATGCCCAGTGGATACTCCATGTGACATGGTTTCTCCCTATGTTACGTGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR CAA 90 bp AAATGTCCAATCTGGGAACTTTTCCTTCAGAGCATCCAGTTGAGGGGATCTCTTAGAAGGACATATGGCTaGGTCATGATTGTTGAGGCT +
Preference number: 5 (lower is better)
Translates to: KCPIWELFLQSIQLRGSLRRTYG*VMIVEA
Trigger: AGCCTCAACAATCATGACCAAGCCATATGTCCTTCT...AAGAGATCCCCTCAACTGGATGCTCTGAAGGAAAAGTTCCCAGATTGGACATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489219.5
CDS TCA 90 bp TGCAAGACATTTTCCTCAGCACCATTAAAGAGAAATATGACAGCATaGTGCAAGGCTTCTGAAGATGTTGACAAGACGCGAAGGACTTCC +
Preference number: 5 (lower is better)
Translates to: CKTFSSAPLKRNMTA*CKASEDVDKTRRTS
Trigger: GGAAGTCCTTCGCGTCTTGTCAACATCTTCAGAAGCCTTGCATCATGCTGTCATATTTCTCTTTAATGGTGCTGAGGAAAATGTCTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000475005.1
ENST00000487088.5
ENST00000489219.5
CDS-3UTR CAA 90 bp AAACCATGTCACATGGAGTATCCACTGGGCATGTACTTAGAGCTCATCCACAAGATTTTCAGGACCTGTTaGGAATACAAGTTCTTTCCC +
Preference number: 5 (lower is better)
Translates to: KPCHMEYPLGMYLELIHKIFRTC*EYKFFP
Trigger: GGGAAAGAACTTGTATTCCAAACAGGTCCTGAAAAT...CTTGTGGATGAGCTCTAAGTACATGCCCAGTGGATACTCCATGTGACATGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000487088.5
ENST00000489219.5
CDS-3UTR CAA 90 bp CAGCCCTATGGCAATCACTTTCCAGTGACCTACACAGAGTTATATTCTCAAGGGATTTTCAGGACCTGTTaGGAATACAAGTTCTTTCCC +
Preference number: 5 (lower is better)
Translates to: QPYGNHFPVTYTELYSQGIFRTC*EYKFFP
Trigger: GGGAAAGAACTTGTATTCCAAACAGGTCCTGAAAAT...CCCTTGAGAATATAACTCTGTGTAGGTCACTGGAAAGTGATTGCCATAGGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
CDS-3UTR CAA 90 bp CATCCACGTAACATAGGGAGAAACCATGTCACATGGAGTATCCACTGGGCATGTTTATTTTGGCTACAGTaGCAGTTCCATACAGACAAA +
Preference number: 5 (lower is better)
Translates to: HPRNIGRNHVTWSIHWACLFWLQ*QFHTDK
Trigger: TTTGTCTGTATGGAACTGCAACTGTAGCCAAAATAA...ACATGCCCAGTGGATACTCCATGTGACATGGTTTCTCCCTATGTTACGTGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000487088.5
ENST00000489219.5
CDS GCA 90 bp TTCAGAACCACTTCTCCCGAGGATAGGGGTAAACATCTCAAATACTaGCCAGATGAGGTACAATGCATAAAGATAAGGAATAAACATCCC +
Preference number: 5 (lower is better)
Translates to: FRTTSPEDRGKHLKY*PDEVQCIKIRNKHP
Trigger: GGGATGTTTATTCCTTATCTTTATGCATTGTACCTCATCTGGGCAGTATTTGAGATGTTTACCCCTATCCTCGGGAGAAGTGGTTCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000214893.9
ENST00000339450.10
ENST00000462592.5
ENST00000489219.5
CDS-3UTR CAA 90 bp ATGGAAGTCCCTGCAGTAAGTAGGCAACATGCTACCCTTCTATTCAACACAGCAATGAAGGCTGTTGCTTaGCACTTCAATCAGTTTAAT +
Preference number: 5 (lower is better)
Translates to: MEVPAVSRQHATLLFNTAMKAVA*HFNQFN
Trigger: ATTAAACTGATTGAAGTGCAAAGCAACAGCCTTCAT...TGCTGTGTTGAATAGAAGGGTAGCATGTTGCCTACTTACTGCAGGGACTTCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR CAA 90 bp GAGACCACTGAGAAAGTGTTGACCCTTTGTGGGCTCGAACATAGAAGGACATATTTATTTTGGCTACAGTaGCAGTTCCATACAGACAAA +
Preference number: 5 (lower is better)
Translates to: ETTEKVLTLCGLEHRRTYLFWLQ*QFHTDK
Trigger: TTTGTCTGTATGGAACTGCAACTGTAGCCAAAATAA...ATATGTCCTTCTATGTTCGAGCCCACAAAGGGTCAACACTTTCTCAGTGGTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487088.5
CDS-3UTR CAA 90 bp TGGCTACATTCTTTGAGTTTAGAAAACGAGATAAAGAATTGCTCATATCTTCCCCGCCGAGCAAAGTCCTaGGTAAGTGAGGGTAACAAG +
Preference number: 5 (lower is better)
Translates to: WLHSLSLENEIKNCSYLPRRAKS*VSEGNK
Trigger: CTTGTTACCCTCACTTACCAAGGACTTTGCTCGGCG...GGGAAGATATGAGCAATTCTTTATCTCGTTTTCTAAACTCAAAGAATGTAGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS-3UTR CAA 90 bp CTGGCTGGAAAACAAAAAGATAGGCCCAGTGCATCAGTAAGATTATACCATGAATTGCACAGTTTACCATaGATCTCACCAATGCCCTCA +
Preference number: 5 (lower is better)
Translates to: LAGKQKDRPSASVRLYHELHSLP*ISPMPS
Trigger: TGAGGGCATTGGTGAGATCAATGGTAAACTGTGCAA...TTCATGGTATAATCTTACTGATGCACTGGGCCTATCTTTTTGTTTTCCAGCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS-3UTR CAA 90 bp GATCTCAGGAATGTGAGGGGTTATGTGAGAAATTCCAGTATAATCAAACCCATTGAAACCATGACTGGCTaGCAAGACATTTTCCTCAGC +
Preference number: 5 (lower is better)
Translates to: DLRNVRGYVRNSSIIKPIETMTG*QDIFLS
Trigger: GCTGAGGAAAATGTCTTGCAAGCCAGTCATGGTTTC...AATGGGTTTGATTATACTGGAATTTCTCACATAACCCCTCACATTCCTGAGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487088.5
CDS-3UTR CAA 90 bp TGGCTACATTCTTTGAGTTTAGAAAACGAGATAAAGAATTGCTCATATCTTCCCACCACTGAGAAAGTGTaGACCCTTTGTGGGCTCGAA +
Preference number: 5 (lower is better)
Translates to: WLHSLSLENEIKNCSYLPTTEKV*TLCGLE
Trigger: TTCGAGCCCACAAAGGGTCAACACTTTCTCAGTGGT...GGGAAGATATGAGCAATTCTTTATCTCGTTTTCTAAACTCAAAGAATGTAGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462592.5
CDS TCA 90 bp ATGCTAAAAGAGCCTGTGGGCCGTTGTACATCTACTGAAATCTTATaGAGGCTGTTGCTTTGCACTTCAATCAGTTTAATCTGTTCCAAA +
Preference number: 5 (lower is better)
Translates to: MLKEPVGRCTSTEIL*RLLLCTSISLICSK
Trigger: TTTGGAACAGATTAAACTGATTGAAGTGCAAAGCAACAGCCTTCATAAGATTTCAGTAGATGTACAACGGCCCACAGGCTCTTTTAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000214893.9
ENST00000339450.10
ENST00000462592.5
ENST00000475005.1
ENST00000487088.5
ENST00000489219.5
CDS-3UTR CAA 90 bp TCCAGTGACCTACACAGAGTTATATTCTCAAGGGGAATCATTACCTCAGTGAATATTTTCAGGACCTGTTaGGAATACAAGTTCTTTCCC +
Preference number: 5 (lower is better)
Translates to: SSDLHRVIFSRGIITSVNIFRTC*EYKFFP
Trigger: GGGAAAGAACTTGTATTCCAAACAGGTCCTGAAAAT...ATTCACTGAGGTAATGATTCCCCTTGAGAATATAACTCTGTGTAGGTCACTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339450.10
ENST00000489219.5
CDS-3UTR CAA 90 bp CCACTGGGCATGTACTTAGAGCTCATCCACAAGATTAAAATACAAAGAGATCGTATTTTCAGGACCTGTTaGGAATACAAGTTCTTTCCC +
Preference number: 5 (lower is better)
Translates to: PLGMYLELIHKIKIQRDRIFRTC*EYKFFP
Trigger: GGGAAAGAACTTGTATTCCAAACAGGTCCTGAAAAT...ACGATCTCTTTGTATTTTAATCTTGTGGATGAGCTCTAAGTACATGCCCAGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS-3UTR CAA 90 bp TCCAGTGACCTACACAGAGTTATATTCTCAAGGGGAATCATTACCTCAGTGAATAGACTCTTGAAGCACTaGAGACTGATTTCTACAAAG +
Preference number: 5 (lower is better)
Translates to: SSDLHRVIFSRGIITSVNRLLKH*RLISTK
Trigger: CTTTGTAGAAATCAGTCTCAAGTGCTTCAAGAGTCT...ATTCACTGAGGTAATGATTCCCCTTGAGAATATAACTCTGTGTAGGTCACTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339450.10
CDS TCA 90 bp CAAGAAATCAATGCTAAAAGAGCCTGTGGGCCGTTGTACATCTACTaGAATCTTATGAAGGCTGTTGCTTTGCACTTCAATCAGTTTAAT +
Preference number: 5 (lower is better)
Translates to: QEINAKRACGPLYIY*NLMKAVALHFNQFN
Trigger: ATTAAACTGATTGAAGTGCAAAGCAACAGCCTTCATAAGATTTCAGTAGATGTACAACGGCCCACAGGCTCTTTTAGCATTGATTTCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000214893.9
ENST00000339450.10
ENST00000462592.5
ENST00000475005.1
ENST00000487088.5
ENST00000489219.5
CDS-3UTR CAA 90 bp CCACTGGGCATGTACTTAGAGCTCATCCACAAGATTAAAATACAAAGAGATCGTTTATTTTGGCTACAGTaGCAGTTCCATACAGACAAA +
Preference number: 5 (lower is better)
Translates to: PLGMYLELIHKIKIQRDRLFWLQ*QFHTDK
Trigger: TTTGTCTGTATGGAACTGCAACTGTAGCCAAAATAA...ACGATCTCTTTGTATTTTAATCTTGTGGATGAGCTCTAAGTACATGCCCAGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487088.5
ENST00000489219.5
CDS TCA 90 bp AATTTGCTTTTGATAAATAAATGCTGCACAGTAGGCCGTAACCATTaGCAATATACCTGGAATGTTCCCAAAATCCCTGTAGATACGAAA +
Preference number: 5 (lower is better)
Translates to: NLLLINKCCTVGRNH*QYTWNVPKIPVDTK
Trigger: TTTCGTATCTACAGGGATTTTGGGAACATTCCAGGTATATTGTCAATGGTTACGGCCTACTGTGCAGCATTTATTTATCAAAAGCAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475005.1
CDS GCA 72 bp AGGGGCGGGTGCACACAGGTGCGGTGCCCCGGAGCCTaGGCAGGAGCCGCAAACGGACGCGCGGGCCGTGCC +
Preference number: 6 (lower is better)
Translates to: RGGCTQVRCPGA*AGAANGRAGRA
Trigger: GGCACGGCCCGCGCGTCCGTTTGCGGCTCCTGCGCAGGCTCCGGGGCACCGCACCTGTGTGCACCCGCCCCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487088.5
CDS CCA 72 bp CGGGCCGTGCCAGGAGGGAGCGGCCGGTACCTGGCTTaGAGCGCGTCGAACTCCCCGCGGTGTCCAGCGGCC +
Preference number: 6 (lower is better)
Translates to: RAVPGGSGRYLA*SASNSPRCPAA
Trigger: GGCCGCTGGACACCGCGGGGAGTTCGACGCGCTCCAAGCCAGGTACCGGCCGCTCCCTCCTGGCACGGCCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487088.5
CDS CAA 72 bp GCGGGCCGTGCCAGGAGGGAGCGGCCGGTACCTGGCTaGGAGCGCGTCGAACTCCCCGCGGTGTCCAGCGGC +
Preference number: 6 (lower is better)
Translates to: AGRARRERPVPG*ERVELPAVSSG
Trigger: GCCGCTGGACACCGCGGGGAGTTCGACGCGCTCCAAGCCAGGTACCGGCCGCTCCCTCCTGGCACGGCCCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487088.5
CDS GCA 72 bp TCCCCGCGGTGTCCAGCGGCCCCGCGTAGCACGAGCTaGTGCAGCGAGAGCTGCACCAGCGTCCGCAGCGCG +
Preference number: 6 (lower is better)
Translates to: SPRCPAAPRSTS*CSESCTSVRSA
Trigger: CGCGCTGCGGACGCTGGTGCAGCTCTCGCTGCAGCAGCTCGTGCTACGCGGGGCCGCTGGACACCGCGGGGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000214893.9
ENST00000339450.10
ENST00000462592.5
ENST00000475005.1
ENST00000487088.5
ENST00000489219.5
CDS GCA 72 bp AGCCTGCGCAGGAGCCGCAAACGGACGCGCGGGCCGTaGCAGGAGGGAGCGGCCGGTACCTGGCTTGGAGCG +
Preference number: 6 (lower is better)
Translates to: SLRRSRKRTRGP*QEGAAGTWLGA
Trigger: CGCTCCAAGCCAGGTACCGGCCGCTCCCTCCTGGCACGGCCCGCGCGTCCGTTTGCGGCTCCTGCGCAGGCT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487088.5
CDS GCA 72 bp AGTCCCAGCGGTCCGGCAGGGGCGGGTGCACACAGGTaGGGTGCCCCGGAGCCTGCGCAGGAGCCGCAAACG +
Preference number: 6 (lower is better)
Translates to: SPSGPAGAGAHR*GAPEPAQEPQT
Trigger: CGTTTGCGGCTCCTGCGCAGGCTCCGGGGCACCGCACCTGTGTGCACCCGCCCCTGCCGGACCGCTGGGACT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487088.5
CDS GCA 72 bp CCGCGGTGTCCAGCGGCCCCGCGTAGCACGAGCTGCTaGAGCGAGAGCTGCACCAGCGTCCGCAGCGCGATC +
Preference number: 6 (lower is better)
Translates to: PRCPAAPRSTSC*SESCTSVRSAI
Trigger: GATCGCGCTGCGGACGCTGGTGCAGCTCTCGCTGCAGCAGCTCGTGCTACGCGGGGCCGCTGGACACCGCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000214893.9
ENST00000339450.10
ENST00000462592.5
ENST00000475005.1
ENST00000487088.5
ENST00000489219.5
CDS GCA 72 bp GCCGCCGCTCCCTCTCGACGCTCTACTCCGACGCGGTaGCGCCTCACAGCAGCCGACTCAGAACCCCACTCC +
Preference number: 6 (lower is better)
Translates to: AAAPSRRSTPTR*RLTAADSEPHS
Trigger: GGAGTGGGGTTCTGAGTCGGCTGCTGTGAGGCGGCACCGCGTCGGAGTAGAGCGTCGAGAGGGAGCGGCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000475005.1
ENST00000489219.5
CDS CCA 72 bp ACAGCCAGCCAAAATGGATGCCAGCACAACATCAGGTaGGATTTCAGAACCACTTCTCCCGAGGATAGGGGT +
Preference number: 6 (lower is better)
Translates to: TASQNGCQHNIR*DFRTTSPEDRG
Trigger: ACCCCTATCCTCGGGAGAAGTGGTTCTGAAATCCCACCTGATGTTGTGCTGGCATCCATTTTGGCTGGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000214893.9
ENST00000339450.10
ENST00000462592.5
ENST00000489219.5
CDS GCA 72 bp GGACGAGAGAATCATTGTACAGCCAGCCAAAATGGATaGCAGCACAACATCAGGTGGGATTTCAGAACCACT +
Preference number: 6 (lower is better)
Translates to: GRENHCTASQNG*QHNIRWDFRTT
Trigger: AGTGGTTCTGAAATCCCACCTGATGTTGTGCTGGCATCCATTTTGGCTGGCTGTACAATGATTCTCTCGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000214893.9
ENST00000339450.10
ENST00000462592.5
ENST00000489219.5
CDS TCA 72 bp TTGGTCATGATTGTTGAGGCTGGCAAGTCCAAAATCTaGAGGATAGGCAGGCAGGCTGTTGCTTCAAAAGTC +
Preference number: 6 (lower is better)
Translates to: LVMIVEAGKSKI*RIGRQAVASKV
Trigger: GACTTTTGAAGCAACAGCCTGCCTGCCTATCCTTCAGATTTTGGACTTGCCAGCCTCAACAATCATGACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489219.5
CDS TCA 72 bp GTGGGCTCGAACATAGAAGGACATATGGCTTGGTCATaGTTGTTGAGGCTGGCAAGTCCAAAATCTGAAGGA +
Preference number: 6 (lower is better)
Translates to: VGSNIEGHMAWS*LLRLASPKSEG
Trigger: TCCTTCAGATTTTGGACTTGCCAGCCTCAACAATCATGACCAAGCCATATGTCCTTCTATGTTCGAGCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489219.5
CDS CAA 72 bp ACCCTTTGTGGGCTCGAACATAGAAGGACATATGGCTaGGTCATGATTGTTGAGGCTGGCAAGTCCAAAATC +
Preference number: 6 (lower is better)
Translates to: TLCGLEHRRTYG*VMIVEAGKSKI
Trigger: GATTTTGGACTTGCCAGCCTCAACAATCATGACCAAGCCATATGTCCTTCTATGTTCGAGCCCACAAAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489219.5
CDS CCA 72 bp AATAGGACGAGAGAATCATTGTACAGCCAGCCAAAATaGATGCCAGCACAACATCAGGTGGGATTTCAGAAC +
Preference number: 6 (lower is better)
Translates to: NRTRESLYSQPK*MPAQHQVGFQN
Trigger: GTTCTGAAATCCCACCTGATGTTGTGCTGGCATCCATTTTGGCTGGCTGTACAATGATTCTCTCGTCCTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000214893.9
ENST00000339450.10
ENST00000462592.5
ENST00000489219.5
CDS CAA 72 bp TACCCAGACAGCACTAATAAACGCCGAGCAAAGTCCTaGGTAAGTGAGGGTAACAAGAAAACAGCAATGGAC +
Preference number: 6 (lower is better)
Translates to: YPDSTNKRRAKS*VSEGNKKTAMD
Trigger: GTCCATTGCTGTTTTCTTGTTACCCTCACTTACCAAGGACTTTGCTCGGCGTTTATTAGTGCTGTCTGGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000214893.9
ENST00000339450.10
ENST00000462592.5
ENST00000487088.5
ENST00000489219.5
CDS TCA 72 bp CAAAACAACACCCATTACCACCATGTAGTTTATGATTaGGCCAATACGAGAGGGGTAGGCAATGACAAACAG +
Preference number: 6 (lower is better)
Translates to: QNNTHYHHVVYD*ANTRGVGNDKQ
Trigger: CTGTTTGTCATTGCCTACCCCTCTCGTATTGGCTCAATCATAAACTACATGGTGGTAATGGGTGTTGTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000214893.9
ENST00000339450.10
ENST00000462592.5
ENST00000487088.5
ENST00000489219.5
CDS TCA 72 bp AATGCTAAAAGAGCCTGTGGGCCGTTGTACATCTACTaGAATCTTATGAAGGCTGTTGCTTTGCACTTCAAT +
Preference number: 6 (lower is better)
Translates to: NAKRACGPLYIY*NLMKAVALHFN
Trigger: ATTGAAGTGCAAAGCAACAGCCTTCATAAGATTTCAGTAGATGTACAACGGCCCACAGGCTCTTTTAGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000214893.9
ENST00000339450.10
ENST00000462592.5
ENST00000475005.1
ENST00000487088.5
ENST00000489219.5
CDS TCA 72 bp TTTTCCTCAGCACCATTAAAGAGAAATATGACAGCATaGTGCAAGGCTTCTGAAGATGTTGACAAGACGCGA +
Preference number: 6 (lower is better)
Translates to: FSSAPLKRNMTA*CKASEDVDKTR
Trigger: TCGCGTCTTGTCAACATCTTCAGAAGCCTTGCATCATGCTGTCATATTTCTCTTTAATGGTGCTGAGGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339450.10
ENST00000462592.5
ENST00000475005.1
ENST00000487088.5
ENST00000489219.5
CDS TCA 72 bp TTGATAAATAAATGCTGCACAGTAGGCCGTAACCATTaGCAATATACCTGGAATGTTCCCAAAATCCCTGTA +
Preference number: 6 (lower is better)
Translates to: LINKCCTVGRNH*QYTWNVPKIPV
Trigger: TACAGGGATTTTGGGAACATTCCAGGTATATTGTCAATGGTTACGGCCTACTGTGCAGCATTTATTTATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475005.1