RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ERMN (Homo sapiens)

Ensembl gene IDs: ENSG00000136541

Ensembl transcript IDs: ENST00000397283.6, ENST00000409216.5, ENST00000409395.3, ENST00000409925.1, ENST00000410096.6, ENST00000411762.5, ENST00000419116.2, ENST00000420317.5, ENST00000420719.6

Found 263 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCTTCCCTAAGGTTGGCTGCTCATCAGGTGTCACAGCTTGGGAACTaGCACTGCTCAGTGGGGAGTCCTCACTTGCATCACCTTCCTCTT +
Preference number: 1 (lower is better)
Translates to: SSLRLAAHQVSQLGN*HCSVGSPHLHHLPL
Trigger: AAGAGGAAGGTGATGCAAGTGAGGACTCCCCACTGAGCAGTGCCAGTTCCCAAGCTGTGACACCTGATGAGCAGCCAACCTTAGGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409395.3
3UTR CCA 90 bp TCACTCTTCTTCCCTAAGGTTGGCTGCTCATCAGGTGTCACAGCTTaGGAACTGGCACTGCTCAGTGGGGAGTCCTCACTTGCATCACCT +
Preference number: 1 (lower is better)
Translates to: SLFFPKVGCSSGVTA*ELALLSGESSLASP
Trigger: AGGTGATGCAAGTGAGGACTCCCCACTGAGCAGTGCCAGTTCCCAAGCTGTGACACCTGATGAGCAGCCAACCTTAGGGAAGAAGAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409395.3
3UTR CCA 90 bp CAAACCTTCTGCTCCTCATCATGTTTAGAATGTAACATGTCAGCTTaGCTAGGTTTTCGAAATCCCAGCCATTCAATTTCAGCTGCCTGG +
Preference number: 1 (lower is better)
Translates to: QTFCSSSCLECNMSA*LGFRNPSHSISAAW
Trigger: CCAGGCAGCTGAAATTGAATGGCTGGGATTTCGAAAACCTAGCCAAGCTGACATGTTACATTCTAAACATGATGAGGAGCAGAAGGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409395.3
3UTR CAA 90 bp ATCTGGAATAAGCATTTCTGGAGATATCACTCTTCTTCCCTAAGGTaGGCTGCTCATCAGGTGTCACAGCTTGGGAACTGGCACTGCTCA +
Preference number: 2 (lower is better)
Translates to: IWNKHFWRYHSSSLR*AAHQVSQLGNWHCS
Trigger: TGAGCAGTGCCAGTTCCCAAGCTGTGACACCTGATGAGCAGCCAACCTTAGGGAAGAAGAGTGATATCTCCAGAAATGCTTATTCCAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409395.3
3UTR-3UTR GCA 90 bp CCTTCTGTCTTCTTATTTCCTGGTTACTGCCACTCAGAGGAATCTTCTCCCACTTCCTCTTTGAGAGGCTaGTCAGTAATCCTCTCCTTC +
Preference number: 2 (lower is better)
Translates to: PSVFLFPGYCHSEESSPTSSLRG*SVILSF
Trigger: GAAGGAGAGGATTACTGAGCAGCCTCTCAAAGAGGA...AGTGGGAGAAGATTCCTCTGAGTGGCAGTAACCAGGAAATAAGAAGACAGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409216.5
ENST00000409395.3
3UTR-3UTR TCA 90 bp TGGAATAAGCATTTCTGGAGATATCACTCTTCTTCCCTAAGGTTGGCTGCTCATGGAATCTTCTCCCACTaGTGCCCTTCTCTGAATGTC +
Preference number: 2 (lower is better)
Translates to: WNKHFWRYHSSSLRLAAHGIFSH*CPSLNV
Trigger: GACATTCAGAGAAGGGCATCAGTGGGAGAAGATTCC...ATGAGCAGCCAACCTTAGGGAAGAAGAGTGATATCTCCAGAAATGCTTATTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409395.3
3UTR-3UTR GCA 90 bp GGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCTATCCTGACTGACAATTaGTCATCTCCCTCTGAGAGA +
Preference number: 2 (lower is better)
Translates to: GLFPHYSTVKKRVNFHLPILTDN*SSPSER
Trigger: TCTCTCAGAGGGAGATGAGCAATTGTCAGTCAGGAT...AGGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
3UTR-3UTR TCA 90 bp TTGAATCACAAAAGCTCAAGTAAACCTTCATGTGTAGCTACCAGTTTGTGTTCTTCATTCATTGTCTGGTaGGAGCACAGAGCTAAGAGG +
Preference number: 2 (lower is better)
Translates to: LNHKSSSKPSCVATSLCSSFIVW*EHRAKR
Trigger: CCTCTTAGCTCTGTGCTCTCACCAGACAATGAATGA...AGAACACAAACTGGTAGCTACACATGAAGGTTTACTTGAGCTTTTGTGATTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
3UTR-3UTR GCA 90 bp TTGAATCACAAAAGCTCAAGTAAACCTTCATGTGTAGCTACCAGTTTGTGTTCTTTTATAGCCGAATTATaGCAGATTCCCCCAGGGGAC +
Preference number: 2 (lower is better)
Translates to: LNHKSSSKPSCVATSLCSFIAEL*QIPPGD
Trigger: GTCCCCTGGGGGAATCTGGCATAATTCGGCTATAAA...AGAACACAAACTGGTAGCTACACATGAAGGTTTACTTGAGCTTTTGTGATTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
3UTR-3UTR GCA 90 bp GGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCTCCATTCAATTTCAGCTaGCTGGTGACCTTTGTTCTT +
Preference number: 2 (lower is better)
Translates to: GLFPHYSTVKKRVNFHLPPFNFS*LVTFVL
Trigger: AAGAACAAAGGTCACCAGGCAGCTGAAATTGAATGG...AGGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409395.3
3UTR-3UTR GCA 90 bp TTGAATCACAAAAGCTCAAGTAAACCTTCATGTGTAGCTACCAGTTTGTGTTCTATCCTGACTGACAATTaGTCATCTCCCTCTGAGAGA +
Preference number: 2 (lower is better)
Translates to: LNHKSSSKPSCVATSLCSILTDN*SSPSER
Trigger: TCTCTCAGAGGGAGATGAGCAATTGTCAGTCAGGAT...AGAACACAAACTGGTAGCTACACATGAAGGTTTACTTGAGCTTTTGTGATTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
3UTR-3UTR CCA 90 bp GGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCTAAAGGCACAGAATTTTaGAAGGCTTATTGCCAGAGT +
Preference number: 2 (lower is better)
Translates to: GLFPHYSTVKKRVNFHLPKGTEF*KAYCQS
Trigger: ACTCTGGCAATAAGCCTTCCAAAATTCTGTGCCTTT...AGGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
3UTR CAA 90 bp CCACTGATGCCCTTCTCTGAATGTCATTTCATCAGCACTAGTTTCTaGGAGAGAAAGATCTGTGATAGCCTTATGAACAATAAAGAGTTT +
Preference number: 2 (lower is better)
Translates to: PLMPFSECHFISTSF*ERKICDSLMNNKEF
Trigger: AAACTCTTTATTGTTCATAAGGCTATCACAGATCTTTCTCTCCAAGAAACTAGTGCTGATGAAATGACATTCAGAGAAGGGCATCAGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409395.3
3UTR-3UTR TCA 90 bp GGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCTCACATTATTCTACAGTaGAAAAGAGAGTCAACTTCC +
Preference number: 2 (lower is better)
Translates to: GLFPHYSTVKKRVNFHLPHIILQ*KRESTS
Trigger: GGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTG...AGGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
3UTR-3UTR GCA 90 bp CTAGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCTTATTTCCTGGTTACTaGCACTCAGAGGAATCTTCT +
Preference number: 2 (lower is better)
Translates to: LGLFPHYSTVKKRVNFHLLFPGY*HSEESS
Trigger: AGAAGATTCCTCTGAGTGGCAGTAACCAGGAAATAA...GAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409395.3
3UTR-3UTR GCA 90 bp GAATTAGCTTTTCCTTTAGTGGGCATGAGAATTTCTCAGTTCCAGTTAGTTTATTGGGGAGTCCTCACTTaGATCACCTTCCTCTTTAAA +
Preference number: 2 (lower is better)
Translates to: ELAFPLVGMRISQFQLVYWGVLT*ITFLFK
Trigger: TTTAAAGAGGAAGGTGATGCAAGTGAGGACTCCCCA...ATAAACTAACTGGAACTGAGAAATTCTCATGCCCACTAAAGGAAAAGCTAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409395.3
3UTR-3UTR GCA 90 bp TTGAATCACAAAAGCTCAAGTAAACCTTCATGTGTAGCTACCAGTTTGTGTTCTTTTTGGAAGGCTTATTaGCAGAGTCTGCAAAATCAA +
Preference number: 2 (lower is better)
Translates to: LNHKSSSKPSCVATSLCSFWKAY*QSLQNQ
Trigger: TTGATTTTGCAGACTCTGGCAATAAGCCTTCCAAAA...AGAACACAAACTGGTAGCTACACATGAAGGTTTACTTGAGCTTTTGTGATTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
3UTR-3UTR GCA 90 bp TTGAATCACAAAAGCTCAAGTAAACCTTCATGTGTAGCTACCAGTTTGTGTTCTCCCACTAAAAATACATaGTCACGCTCTACTTTGAAA +
Preference number: 2 (lower is better)
Translates to: LNHKSSSKPSCVATSLCSPTKNT*SRSTLK
Trigger: TTTCAAAGTAGAGCGTGAGCATGTATTTTTAGTGGG...AGAACACAAACTGGTAGCTACACATGAAGGTTTACTTGAGCTTTTGTGATTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
3UTR-3UTR CCA 90 bp TTGAATCACAAAAGCTCAAGTAAACCTTCATGTGTAGCTACCAGTTTGTGTTCTGGTAGGTTAAAAACATaGTCCTGTTATGTGATAGAT +
Preference number: 2 (lower is better)
Translates to: LNHKSSSKPSCVATSLCSGRLKT*SCYVID
Trigger: ATCTATCACATAACAGGACCATGTTTTTAACCTACC...AGAACACAAACTGGTAGCTACACATGAAGGTTTACTTGAGCTTTTGTGATTCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
3UTR-3UTR CCA 90 bp TTGAATCACAAAAGCTCAAGTAAACCTTCATGTGTAGCTACCAGTTTGTGTTCTATCCATCATCTCTGTTaGAATAACTCAAAATACAGG +
Preference number: 2 (lower is better)
Translates to: LNHKSSSKPSCVATSLCSIHHLC*NNSKYR
Trigger: CCTGTATTTTGAGTTATTCCAACAGAGATGATGGAT...AGAACACAAACTGGTAGCTACACATGAAGGTTTACTTGAGCTTTTGTGATTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
3UTR-3UTR CCA 90 bp GAATTAGCTTTTCCTTTAGTGGGCATGAGAATTTCTCAGTTCCAGTTAGTTTATTGGAATAAGCATTTCTaGAGATATCACTCTTCTTCC +
Preference number: 2 (lower is better)
Translates to: ELAFPLVGMRISQFQLVYWNKHF*RYHSSS
Trigger: GGAAGAAGAGTGATATCTCCAGAAATGCTTATTCCA...ATAAACTAACTGGAACTGAGAAATTCTCATGCCCACTAAAGGAAAAGCTAATTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409395.3
3UTR CCA 72 bp AGGTTGGCTGCTCATCAGGTGTCACAGCTTGGGAACTaGCACTGCTCAGTGGGGAGTCCTCACTTGCATCAC +
Preference number: 3 (lower is better)
Translates to: RLAAHQVSQLGN*HCSVGSPHLHH
Trigger: GTGATGCAAGTGAGGACTCCCCACTGAGCAGTGCCAGTTCCCAAGCTGTGACACCTGATGAGCAGCCAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409395.3
3UTR CCA 72 bp TTCCCTAAGGTTGGCTGCTCATCAGGTGTCACAGCTTaGGAACTGGCACTGCTCAGTGGGGAGTCCTCACTT +
Preference number: 3 (lower is better)
Translates to: FPKVGCSSGVTA*ELALLSGESSL
Trigger: AAGTGAGGACTCCCCACTGAGCAGTGCCAGTTCCCAAGCTGTGACACCTGATGAGCAGCCAACCTTAGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409395.3
3UTR CCA 72 bp ATCAGGTGTCACAGCTTGGGAACTGGCACTGCTCAGTaGGGAGTCCTCACTTGCATCACCTTCCTCTTTAAA +
Preference number: 3 (lower is better)
Translates to: IRCHSLGTGTAQ*GVLTCITFLFK
Trigger: TTTAAAGAGGAAGGTGATGCAAGTGAGGACTCCCCACTGAGCAGTGCCAGTTCCCAAGCTGTGACACCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409395.3
3UTR GCA 72 bp TTTCTGGAGATATCACTCTTCTTCCCTAAGGTTGGCTaGTCATCAGGTGTCACAGCTTGGGAACTGGCACTG +
Preference number: 3 (lower is better)
Translates to: FLEISLFFPKVG*SSGVTAWELAL
Trigger: CAGTGCCAGTTCCCAAGCTGTGACACCTGATGAGCAGCCAACCTTAGGGAAGAAGAGTGATATCTCCAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409395.3
3UTR CCA 72 bp CTCTGTGGCTTTCAACTCTGTGGCTTTCGTGTAAGATaGCGGTATAGGGCCATGGACACCAATGCCAAAGAA +
Preference number: 3 (lower is better)
Translates to: LCGFQLCGFRVR*RYRAMDTNAKE
Trigger: TTCTTTGGCATTGGTGTCCATGGCCCTATACCGCCATCTTACACGAAAGCCACAGAGTTGAAAGCCACAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
3UTR GCA 72 bp GCTAGGTTTTCGAAATCCCAGCCATTCAATTTCAGCTaGCTGGTGACCTTTGTTCTTCCTGTCCTCATCTTC +
Preference number: 3 (lower is better)
Translates to: ARFSKSQPFNFS*LVTFVLPVLIF
Trigger: GAAGATGAGGACAGGAAGAACAAAGGTCACCAGGCAGCTGAAATTGAATGGCTGGGATTTCGAAAACCTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409395.3
3UTR TCA 72 bp AAGACTCAAATGGCCAACCATCACCATTATGTTACCTaGGGTCACTTAACTCTGTGGCTTTCAACTCTGTGG +
Preference number: 3 (lower is better)
Translates to: KTQMANHHHYVT*GHLTLWLSTLW
Trigger: CCACAGAGTTGAAAGCCACAGAGTTAAGTGACCTCAGGTAACATAATGGTGATGGTTGGCCATTTGAGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
3UTR CCA 72 bp CCCACCTCTAGTTCTACAGGAATCCATCATCTCTGTTaGAATAACTCAAAATACAGGCTCTTGATGGTAGGT +
Preference number: 3 (lower is better)
Translates to: PTSSSTGIHHLC*NNSKYRLLMVG
Trigger: ACCTACCATCAAGAGCCTGTATTTTGAGTTATTCCAACAGAGATGATGGATTCCTGTAGAACTAGAGGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
3UTR CCA 72 bp CAGACCTTTGTCTTTCCTAGGTTACAAAGACTCAAATaGCCAACCATCACCATTATGTTACCTGAGGTCACT +
Preference number: 3 (lower is better)
Translates to: QTFVFPRLQRLK*PTITIMLPEVT
Trigger: AGTGACCTCAGGTAACATAATGGTGATGGTTGGCCATTTGAGTCTTTGTAACCTAGGAAAGACAAAGGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
3UTR CCA 72 bp TGCTCCTCATCATGTTTAGAATGTAACATGTCAGCTTaGCTAGGTTTTCGAAATCCCAGCCATTCAATTTCA +
Preference number: 3 (lower is better)
Translates to: CSSSCLECNMSA*LGFRNPSHSIS
Trigger: TGAAATTGAATGGCTGGGATTTCGAAAACCTAGCCAAGCTGACATGTTACATTCTAAACATGATGAGGAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409395.3
3UTR-3UTR CAA 90 bp TTGAATCACAAAAGCTCAAGTAAACCTTCATGTGTAGCTACCAGTTTGTGTTCTATTTTGGAAGGCTTATaGCCAGAGTCTGCAAAATCA +
Preference number: 3 (lower is better)
Translates to: LNHKSSSKPSCVATSLCSILEGL*PESAKS
Trigger: TGATTTTGCAGACTCTGGCAATAAGCCTTCCAAAAT...AGAACACAAACTGGTAGCTACACATGAAGGTTTACTTGAGCTTTTGTGATTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
CDS-3UTR CCA 90 bp AGGAATCTTCTCCCACTGATGCCACAAAATAGCTGGGCGTGGTGTCAGGTGCCTGAATCGCTTGAACCCTaGAGACAGAGGTTGCAGTCT +
Preference number: 4 (lower is better)
Translates to: RNLLPLMPQNSWAWCQVPESLEP*RQRLQS
Trigger: AGACTGCAACCTCTGTCTCCAGGGTTCAAGCGATTC...AGGCACCTGACACCACGCCCAGCTATTTTGTGGCATCAGTGGGAGAAGATTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409925.1
CDS-3UTR TCA 90 bp TTCCTGGTTACTGCCACTCAGAGGAATCTTCTCCCACTGATGCCCTGTAATCCCGTCATGATGTGCGGTTaGATCCGATCTGGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: FLVTATQRNLLPLMPCNPVMMCG*IRSGER
Trigger: TCTCTCTCCAGATCGGATTCAACCGCACATCATGAC...GGGATTACAGGGCATCAGTGGGAGAAGATTCCTCTGAGTGGCAGTAACCAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409216.5
CDS-3UTR GCA 90 bp CTGGTTACTGCCACTCAGAGGAATCTTCTCCCACTGATGCCCTGTAATCCCAGTACAGAGGTTGCAGTCTaGCGAGATTGCACCATTGCA +
Preference number: 4 (lower is better)
Translates to: LVTATQRNLLPLMPCNPSTEVAV*RDCTIA
Trigger: TGCAATGGTGCAATCTCGGCAGACTGCAACCTCTGT...ACTGGGATTACAGGGCATCAGTGGGAGAAGATTCCTCTGAGTGGCAGTAACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409216.5
CDS-3UTR CCA 90 bp TTCCTGGTTACTGCCACTCAGAGGAATCTTCTCCCACTGATGCCACAAAATAGCTTCTACCCTGTAGTGTaGCAGGGGGCTGTCCACATC +
Preference number: 4 (lower is better)
Translates to: FLVTATQRNLLPLMPQNSFYPVV*QGAVHI
Trigger: GATGTGGACAGCCCCCTGCCACACTACAGGGTAGAA...GCTATTTTGTGGCATCAGTGGGAGAAGATTCCTCTGAGTGGCAGTAACCAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409925.1
CDS-3UTR CCA 90 bp CTGGTTACTGCCACTCAGAGGAATCTTCTCCCACTGATGCCCTGTAATCCCAGTGAATCGCTTGAACCCTaGAGACAGAGGTTGCAGTCT +
Preference number: 4 (lower is better)
Translates to: LVTATQRNLLPLMPCNPSESLEP*RQRLQS
Trigger: AGACTGCAACCTCTGTCTCCAGGGTTCAAGCGATTC...ACTGGGATTACAGGGCATCAGTGGGAGAAGATTCCTCTGAGTGGCAGTAACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409216.5
CDS-3UTR CCA 90 bp AAGCATTTCTGGAGATATCACTCTTCTTCCCTAAGGTTGGCTGCTCATCAGGTGACTGGCACTGCTCAGTaGGGAGTCCTCACTTGCATC +
Preference number: 4 (lower is better)
Translates to: KHFWRYHSSSLRLAAHQVTGTAQ*GVLTCI
Trigger: GATGCAAGTGAGGACTCCCCACTGAGCAGTGCCAGT...CACCTGATGAGCAGCCAACCTTAGGGAAGAAGAGTGATATCTCCAGAAATGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409395.3
CDS-3UTR CCA 90 bp TTCCTGGTTACTGCCACTCAGAGGAATCTTCTCCCACTGATGCCCTGTAATCCCCGGTTGAATCCGATCTaGAGAGAGAGCTTTAGGGAA +
Preference number: 4 (lower is better)
Translates to: FLVTATQRNLLPLMPCNPRLNPI*RESFRE
Trigger: TTCCCTAAAGCTCTCTCTCCAGATCGGATTCAACCG...GGGATTACAGGGCATCAGTGGGAGAAGATTCCTCTGAGTGGCAGTAACCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409216.5
CDS-3UTR CCA 90 bp CTGGTTACTGCCACTCAGAGGAATCTTCTCCCACTGATGCCACAAAATAGCTGGCAAAATAGCTGGGCGTaGTGTCAGGTGCCTGTAATC +
Preference number: 4 (lower is better)
Translates to: LVTATQRNLLPLMPQNSWQNSWA*CQVPVI
Trigger: GATTACAGGCACCTGACACCACGCCCAGCTATTTTG...CCAGCTATTTTGTGGCATCAGTGGGAGAAGATTCCTCTGAGTGGCAGTAACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409925.1
CDS-3UTR TCA 90 bp TTCTTATTTCCTGGTTACTGCCACTCAGAGGAATCTTCTCCCACTGATGCCCTGCCTCCATGGATGAGTTaGGCAGCATGTTCCCTTGTA +
Preference number: 4 (lower is better)
Translates to: FLFPGYCHSEESSPTDALPPWMS*AACSLV
Trigger: TACAAGGGAACATGCTGCTCAACTCATCCATGGAGG...CAGGGCATCAGTGGGAGAAGATTCCTCTGAGTGGCAGTAACCAGGAAATAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409216.5
CDS-3UTR GCA 90 bp TTCTTATTTCCTGGTTACTGCCACTCAGAGGAATCTTCTCCCACTGATGCCCTGACTTCCTTTGGTGAGTaGACCTTCCAGACTGGGTTC +
Preference number: 4 (lower is better)
Translates to: FLFPGYCHSEESSPTDALTSFGE*TFQTGF
Trigger: GAACCCAGTCTGGAAGGTGCACTCACCAAAGGAAGT...CAGGGCATCAGTGGGAGAAGATTCCTCTGAGTGGCAGTAACCAGGAAATAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409216.5
CDS-3UTR CCA 90 bp TCCTTCTGTCTTCTTATTTCCTGGTTACTGCCACTCAGAGGAATCTTCTCCCACGTGCACCTTCCAGACTaGGTTCTACCCTGTAGTGTG +
Preference number: 4 (lower is better)
Translates to: SFCLLISWLLPLRGIFSHVHLPD*VLPCSV
Trigger: CACACTACAGGGTAGAACCCAGTCTGGAAGGTGCAC...GTGGGAGAAGATTCCTCTGAGTGGCAGTAACCAGGAAATAAGAAGACAGAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409216.5
ENST00000409395.3
CDS-3UTR TCA 90 bp CCTTCTGTCTTCTTATTTCCTGGTTACTGCCACTCAGAGGAATCTTCTCCCACTCCGGAACATCTGTCATaGTGTGCGGTTGAATCCGAT +
Preference number: 4 (lower is better)
Translates to: PSVFLFPGYCHSEESSPTPEHLS*CAVESD
Trigger: ATCGGATTCAACCGCACATCATGACAGATGTTCCGG...AGTGGGAGAAGATTCCTCTGAGTGGCAGTAACCAGGAAATAAGAAGACAGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409216.5
ENST00000409395.3
CDS-3UTR TCA 90 bp TCTTCTTATTTCCTGGTTACTGCCACTCAGAGGAATCTTCTCCCACTGATGCCACCTCCATGGATGAGTTaGGCAGCATGTTCCCTTGTA +
Preference number: 4 (lower is better)
Translates to: SSYFLVTATQRNLLPLMPPPWMS*AACSLV
Trigger: TACAAGGGAACATGCTGCTCAACTCATCCATGGAGG...TGGCATCAGTGGGAGAAGATTCCTCTGAGTGGCAGTAACCAGGAAATAAGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409925.1
CDS-3UTR GCA 90 bp GGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCTCTTGGGAACTGGCACTaGTCAGTGGGGAGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: GLFPHYSTVKKRVNFHLPLGNWH*SVGSPH
Trigger: GTGAGGACTCCCCACTGAGCAGTGCCAGTTCCCAAG...AGGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR GCA 90 bp AAAAGAGAGTCAACTTCCACCTCCCTCCAAGTGATAACTCAAATAAGGCATAGACTTGGGAACTGGCACTaGTCAGTGGGGAGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: KRESTSTSLQVITQIRHRLGNWH*SVGSPH
Trigger: GTGAGGACTCCCCACTGAGCAGTGCCAGTTCCCAAG...TCTATGCCTTATTTGAGTTATCACTTGGAGGGAGGTGGAAGTTGACTCTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR GCA 90 bp AGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCCTTGGGAACTGGCACTaGTCAGTGGGGAGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: RVISTLFYSEKESQLPPPLGNWH*SVGSPH
Trigger: GTGAGGACTCCCCACTGAGCAGTGCCAGTTCCCAAG...GGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR GCA 90 bp CATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCTCCAAGTGATAACCTTGGGAACTGGCACTaGTCAGTGGGGAGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: HYSTVKKRVNFHLPPSDNLGNWH*SVGSPH
Trigger: GTGAGGACTCCCCACTGAGCAGTGCCAGTTCCCAAG...GTTATCACTTGGAGGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR GCA 90 bp TCTTATTTCCTGGTTACTGCCACTCAGAGGAATCTTCTCCCACTGATGCCACAAACAGAGGTTGCAGTCTaGCGAGATTGCACCATTGCA +
Preference number: 4 (lower is better)
Translates to: SYFLVTATQRNLLPLMPQTEVAV*RDCTIA
Trigger: TGCAATGGTGCAATCTCGGCAGACTGCAACCTCTGT...TTGTGGCATCAGTGGGAGAAGATTCCTCTGAGTGGCAGTAACCAGGAAATAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409925.1
CDS-3UTR CCA 90 bp ATCTTCTTCCTCTTTGAGAGGCTGCTCAGTAATCCTCTCCTTCTGTCTTCTTATTTCTACCCTGTAGTGTaGCAGGGGGCTGTCCACATC +
Preference number: 4 (lower is better)
Translates to: IFFLFERLLSNPLLLSSYFYPVV*QGAVHI
Trigger: GATGTGGACAGCCCCCTGCCACACTACAGGGTAGAA...ATAAGAAGACAGAAGGAGAGGATTACTGAGCAGCCTCTCAAAGAGGAAGAAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409216.5
ENST00000409395.3
CDS-3UTR CCA 90 bp TTATTTCCTGGTTACTGCCACTCAGAGGAATCTTCTCCCACTGATGCCACAAAAGTGCACCTTCCAGACTaGGTTCTACCCTGTAGTGTG +
Preference number: 4 (lower is better)
Translates to: LFPGYCHSEESSPTDATKVHLPD*VLPCSV
Trigger: CACACTACAGGGTAGAACCCAGTCTGGAAGGTGCAC...TTTTGTGGCATCAGTGGGAGAAGATTCCTCTGAGTGGCAGTAACCAGGAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409925.1
CDS-3UTR TCA 90 bp TCATCTTCTTCCTCTTTGAGAGGCTGCTCAGTAATCCTCTCCTTCTGTCTTCTTTTTGTCCTCCATGGATaGGTTGAGCAGCATGTTCCC +
Preference number: 4 (lower is better)
Translates to: SSSSSLRGCSVILSFCLLFVLHG*VEQHVP
Trigger: GGGAACATGCTGCTCAACTCATCCATGGAGGACAAA...AAGAAGACAGAAGGAGAGGATTACTGAGCAGCCTCTCAAAGAGGAAGAAGATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409216.5
ENST00000409395.3
CDS-3UTR TCA 90 bp TTATTTCCTGGTTACTGCCACTCAGAGGAATCTTCTCCCACTGATGCCACAAAATTTGTCCTCCATGGATaGGTTGAGCAGCATGTTCCC +
Preference number: 4 (lower is better)
Translates to: LFPGYCHSEESSPTDATKFVLHG*VEQHVP
Trigger: GGGAACATGCTGCTCAACTCATCCATGGAGGACAAA...TTTTGTGGCATCAGTGGGAGAAGATTCCTCTGAGTGGCAGTAACCAGGAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409925.1
CDS-3UTR TCA 90 bp TCATCTTCTTCCTCTTTGAGAGGCTGCTCAGTAATCCTCTCCTTCTGTCTTCTTGGAATCTTCTCCCACTaGTGCCCTTCTCTGAATGTC +
Preference number: 4 (lower is better)
Translates to: SSSSSLRGCSVILSFCLLGIFSH*CPSLNV
Trigger: GACATTCAGAGAAGGGCATCAGTGGGAGAAGATTCC...AAGAAGACAGAAGGAGAGGATTACTGAGCAGCCTCTCAAAGAGGAAGAAGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409395.3
CDS-3UTR TCA 90 bp TTATTTCCTGGTTACTGCCACTCAGAGGAATCTTCTCCCACTGATGCCACAAAAGGAATCTTCTCCCACTaGTGCCACAAAATAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LFPGYCHSEESSPTDATKGIFSH*CHKIAG
Trigger: CCCAGCTATTTTGTGGCATCAGTGGGAGAAGATTCC...TTTTGTGGCATCAGTGGGAGAAGATTCCTCTGAGTGGCAGTAACCAGGAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409925.1
CDS-3UTR GCA 90 bp TTATTTCCTGGTTACTGCCACTCAGAGGAATCTTCTCCCACTGATGCCACAAAAACTTCCTTTGGTGAGTaGACCTTCCAGACTGGGTTC +
Preference number: 4 (lower is better)
Translates to: LFPGYCHSEESSPTDATKTSFGE*TFQTGF
Trigger: GAACCCAGTCTGGAAGGTGCACTCACCAAAGGAAGT...TTTTGTGGCATCAGTGGGAGAAGATTCCTCTGAGTGGCAGTAACCAGGAAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409925.1
CDS-3UTR CCA 90 bp AAAAGAGAGTCAACTTCCACCTCCCTCCAAGTGATAACTCAAATAAGGCATAGATTCTACCCTGTAGTGTaGCAGGGGGCTGTCCACATC +
Preference number: 4 (lower is better)
Translates to: KRESTSTSLQVITQIRHRFYPVV*QGAVHI
Trigger: GATGTGGACAGCCCCCTGCCACACTACAGGGTAGAA...TCTATGCCTTATTTGAGTTATCACTTGGAGGGAGGTGGAAGTTGACTCTCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR CCA 90 bp AGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCACTGGCACTGCTCAGTaGGGAGTCCTCACTTGCATC +
Preference number: 4 (lower is better)
Translates to: RVISTLFYSEKESQLPPPTGTAQ*GVLTCI
Trigger: GATGCAAGTGAGGACTCCCCACTGAGCAGTGCCAGT...GGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR CCA 90 bp AAAAGAGAGTCAACTTCCACCTCCCTCCAAGTGATAACTCAAATAAGGCATAGAACTGGCACTGCTCAGTaGGGAGTCCTCACTTGCATC +
Preference number: 4 (lower is better)
Translates to: KRESTSTSLQVITQIRHRTGTAQ*GVLTCI
Trigger: GATGCAAGTGAGGACTCCCCACTGAGCAGTGCCAGT...TCTATGCCTTATTTGAGTTATCACTTGGAGGGAGGTGGAAGTTGACTCTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR CCA 90 bp AGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCTCACAGCTTGGGAACTaGCACTGCTCAGTGGGGAGT +
Preference number: 4 (lower is better)
Translates to: RVISTLFYSEKESQLPPPSQLGN*HCSVGS
Trigger: ACTCCCCACTGAGCAGTGCCAGTTCCCAAGCTGTGA...GGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR CCA 90 bp CATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCTCCAAGTGATAACTCACAGCTTGGGAACTaGCACTGCTCAGTGGGGAGT +
Preference number: 4 (lower is better)
Translates to: HYSTVKKRVNFHLPPSDNSQLGN*HCSVGS
Trigger: ACTCCCCACTGAGCAGTGCCAGTTCCCAAGCTGTGA...GTTATCACTTGGAGGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR CCA 90 bp CCTTCTGTCTTCTTATTTCCTGGTTACTGCCACTCAGAGGAATCTTCTCCCACTCGGTTGAATCCGATCTaGAGAGAGAGCTTTAGGGAA +
Preference number: 4 (lower is better)
Translates to: PSVFLFPGYCHSEESSPTRLNPI*RESFRE
Trigger: TTCCCTAAAGCTCTCTCTCCAGATCGGATTCAACCG...AGTGGGAGAAGATTCCTCTGAGTGGCAGTAACCAGGAAATAAGAAGACAGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409216.5
ENST00000409395.3
CDS-3UTR TCA 90 bp TCCTTCTGTCTTCTTATTTCCTGGTTACTGCCACTCAGAGGAATCTTCTCCCACACACTCCGTCTTCTCTaGATGTCATTTCATCAGCAC +
Preference number: 4 (lower is better)
Translates to: SFCLLISWLLPLRGIFSHTLRLL*MSFHQH
Trigger: GTGCTGATGAAATGACATTCAGAGAAGACGGAGTGT...GTGGGAGAAGATTCCTCTGAGTGGCAGTAACCAGGAAATAAGAAGACAGAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409216.5
CDS-3UTR TCA 90 bp TTCTTATTTCCTGGTTACTGCCACTCAGAGGAATCTTCTCCCACTGATGCCACAACACTCCGTCTTCTCTaGATGTCATTTCATCAGCAC +
Preference number: 4 (lower is better)
Translates to: FLFPGYCHSEESSPTDATTLRLL*MSFHQH
Trigger: GTGCTGATGAAATGACATTCAGAGAAGACGGAGTGT...TGTGGCATCAGTGGGAGAAGATTCCTCTGAGTGGCAGTAACCAGGAAATAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409925.1
CDS-3UTR GCA 90 bp CTGGTTACTGCCACTCAGAGGAATCTTCTCCCACTGATGCCACAAAATAGCTGGTTATTTCCTGGTTACTaGCACTCAGAGGAATCTTCT +
Preference number: 4 (lower is better)
Translates to: LVTATQRNLLPLMPQNSWLFPGY*HSEESS
Trigger: AGAAGATTCCTCTGAGTGGCAGTAACCAGGAAATAA...CCAGCTATTTTGTGGCATCAGTGGGAGAAGATTCCTCTGAGTGGCAGTAACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409925.1
CDS-3UTR GCA 90 bp ATCTTCTTCCTCTTTGAGAGGCTGCTCAGTAATCCTCTCCTTCTGTCTTCTTATTTCCCTAAGGTTGGCTaGTCATCAGGTGTCACAGCT +
Preference number: 4 (lower is better)
Translates to: IFFLFERLLSNPLLLSSYFPKVG*SSGVTA
Trigger: AGCTGTGACACCTGATGAGCAGCCAACCTTAGGGAA...ATAAGAAGACAGAAGGAGAGGATTACTGAGCAGCCTCTCAAAGAGGAAGAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409395.3
CDS-3UTR CCA 90 bp GGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCTGTGCAGATGTTTCCTTaGACCAGAGATCCCACAGGG +
Preference number: 4 (lower is better)
Translates to: GLFPHYSTVKKRVNFHLPVQMFP*TRDPTG
Trigger: CCCTGTGGGATCTCTGGTCCAAGGAAACATCTGCAC...AGGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397283.6
CDS-3UTR CCA 90 bp TCATCTTCTTCCTCTTTGAGAGGCTGCTCAGTAATCCTCTCCTTCTGTCTTCTTCCATTACACTCAGCCTaGGTAAATGTAGCCGGAACA +
Preference number: 4 (lower is better)
Translates to: SSSSSLRGCSVILSFCLLPLHSA*VNVAGT
Trigger: TGTTCCGGCTACATTTACCCAGGCTGAGTGTAATGG...AAGAAGACAGAAGGAGAGGATTACTGAGCAGCCTCTCAAAGAGGAAGAAGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409216.5
ENST00000409395.3
CDS-3UTR CCA 90 bp CTAGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCTTCTACCCTGTAGTGTaGCAGGGGGCTGTCCACATC +
Preference number: 4 (lower is better)
Translates to: LGLFPHYSTVKKRVNFHLFYPVV*QGAVHI
Trigger: GATGTGGACAGCCCCCTGCCACACTACAGGGTAGAA...GAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR CCA 90 bp ACCTTCTGCTCCTCATCATGTTTAGAATGTAACATGTCAGCTTGGCTAGGTTTTGTGCACCTTCCAGACTaGGTTCTACCCTGTAGTGTG +
Preference number: 4 (lower is better)
Translates to: TFCSSSCLECNMSAWLGFVHLPD*VLPCSV
Trigger: CACACTACAGGGTAGAACCCAGTCTGGAAGGTGCAC...AAAACCTAGCCAAGCTGACATGTTACATTCTAAACATGATGAGGAGCAGAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409395.3
CDS-3UTR CCA 90 bp AAAAGAGAGTCAACTTCCACCTCCCTCCAAGTGATAACTCAAATAAGGCATAGAGTGCACCTTCCAGACTaGGTTCTACCCTGTAGTGTG +
Preference number: 4 (lower is better)
Translates to: KRESTSTSLQVITQIRHRVHLPD*VLPCSV
Trigger: CACACTACAGGGTAGAACCCAGTCTGGAAGGTGCAC...TCTATGCCTTATTTGAGTTATCACTTGGAGGGAGGTGGAAGTTGACTCTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR CCA 90 bp CTAGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCTCACAGCTTGGGAACTaGCACTGCTCAGTGGGGAGT +
Preference number: 4 (lower is better)
Translates to: LGLFPHYSTVKKRVNFHLSQLGN*HCSVGS
Trigger: ACTCCCCACTGAGCAGTGCCAGTTCCCAAGCTGTGA...GAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR CCA 90 bp AGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCTCAGGTGTCACAGCTTaGGAACTGGCACTGCTCAGT +
Preference number: 4 (lower is better)
Translates to: RVISTLFYSEKESQLPPPSGVTA*ELALLS
Trigger: ACTGAGCAGTGCCAGTTCCCAAGCTGTGACACCTGA...GGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR CCA 90 bp CATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCTCCAAGTGATAACTCAGGTGTCACAGCTTaGGAACTGGCACTGCTCAGT +
Preference number: 4 (lower is better)
Translates to: HYSTVKKRVNFHLPPSDNSGVTA*ELALLS
Trigger: ACTGAGCAGTGCCAGTTCCCAAGCTGTGACACCTGA...GTTATCACTTGGAGGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR TCA 90 bp AAAAGAGAGTCAACTTCCACCTCCCTCCAAGTGATAACTCAAATAAGGCATAGAGTCATGATGTGCGGTTaGATCCGATCTGGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: KRESTSTSLQVITQIRHRVMMCG*IRSGER
Trigger: TCTCTCTCCAGATCGGATTCAACCGCACATCATGAC...TCTATGCCTTATTTGAGTTATCACTTGGAGGGAGGTGGAAGTTGACTCTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR TCA 90 bp ACCTTCTGCTCCTCATCATGTTTAGAATGTAACATGTCAGCTTGGCTAGGTTTTGTCATGATGTGCGGTTaGATCCGATCTGGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: TFCSSSCLECNMSAWLGFVMMCG*IRSGER
Trigger: TCTCTCTCCAGATCGGATTCAACCGCACATCATGAC...AAAACCTAGCCAAGCTGACATGTTACATTCTAAACATGATGAGGAGCAGAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409395.3
CDS-3UTR TCA 90 bp AGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCGTCATGATGTGCGGTTaGATCCGATCTGGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: RVISTLFYSEKESQLPPPVMMCG*IRSGER
Trigger: TCTCTCTCCAGATCGGATTCAACCGCACATCATGAC...GGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR TCA 90 bp CATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCTCCAAGTGATAACCCGGAACATCTGTCATaGTGTGCGGTTGAATCCGAT +
Preference number: 4 (lower is better)
Translates to: HYSTVKKRVNFHLPPSDNPEHLS*CAVESD
Trigger: ATCGGATTCAACCGCACATCATGACAGATGTTCCGG...GTTATCACTTGGAGGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR TCA 90 bp AAAAGAGAGTCAACTTCCACCTCCCTCCAAGTGATAACTCAAATAAGGCATAGACCTCCATGGATGAGTTaGGCAGCATGTTCCCTTGTA +
Preference number: 4 (lower is better)
Translates to: KRESTSTSLQVITQIRHRPPWMS*AACSLV
Trigger: TACAAGGGAACATGCTGCTCAACTCATCCATGGAGG...TCTATGCCTTATTTGAGTTATCACTTGGAGGGAGGTGGAAGTTGACTCTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR TCA 90 bp GGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCTCCTCCATGGATGAGTTaGGCAGCATGTTCCCTTGTA +
Preference number: 4 (lower is better)
Translates to: GLFPHYSTVKKRVNFHLPPPWMS*AACSLV
Trigger: TACAAGGGAACATGCTGCTCAACTCATCCATGGAGG...AGGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR TCA 90 bp GGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCTTTTGTCCTCCATGGATaGGTTGAGCAGCATGTTCCC +
Preference number: 4 (lower is better)
Translates to: GLFPHYSTVKKRVNFHLPFVLHG*VEQHVP
Trigger: GGGAACATGCTGCTCAACTCATCCATGGAGGACAAA...AGGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR TCA 90 bp AAAAGAGAGTCAACTTCCACCTCCCTCCAAGTGATAACTCAAATAAGGCATAGATTTGTCCTCCATGGATaGGTTGAGCAGCATGTTCCC +
Preference number: 4 (lower is better)
Translates to: KRESTSTSLQVITQIRHRFVLHG*VEQHVP
Trigger: GGGAACATGCTGCTCAACTCATCCATGGAGGACAAA...TCTATGCCTTATTTGAGTTATCACTTGGAGGGAGGTGGAAGTTGACTCTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR TCA 90 bp AGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCGGAATCTTCTCCCACTaGTGCCCTTCTCTGAATGTC +
Preference number: 4 (lower is better)
Translates to: RVISTLFYSEKESQLPPPGIFSH*CPSLNV
Trigger: GACATTCAGAGAAGGGCATCAGTGGGAGAAGATTCC...GGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR GCA 90 bp AGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCACTTCCTTTGGTGAGTaGACCTTCCAGACTGGGTTC +
Preference number: 4 (lower is better)
Translates to: RVISTLFYSEKESQLPPPTSFGE*TFQTGF
Trigger: GAACCCAGTCTGGAAGGTGCACTCACCAAAGGAAGT...GGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR GCA 90 bp GGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCTACTTCCTTTGGTGAGTaGACCTTCCAGACTGGGTTC +
Preference number: 4 (lower is better)
Translates to: GLFPHYSTVKKRVNFHLPTSFGE*TFQTGF
Trigger: GAACCCAGTCTGGAAGGTGCACTCACCAAAGGAAGT...AGGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR GCA 90 bp TTCTTATTTCCTGGTTACTGCCACTCAGAGGAATCTTCTCCCACTGATGCCCTGTTATTTCCTGGTTACTaGCACTCAGAGGAATCTTCT +
Preference number: 4 (lower is better)
Translates to: FLFPGYCHSEESSPTDALLFPGY*HSEESS
Trigger: AGAAGATTCCTCTGAGTGGCAGTAACCAGGAAATAA...CAGGGCATCAGTGGGAGAAGATTCCTCTGAGTGGCAGTAACCAGGAAATAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409216.5
CDS-3UTR GCA 90 bp ATCTTCTTCCTCTTTGAGAGGCTGCTCAGTAATCCTCTCCTTCTGTCTTCTTATTCCTCTTTGAGAGGCTaGTCAGTAATCCTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: IFFLFERLLSNPLLLSSYSSLRG*SVILSF
Trigger: GAAGGAGAGGATTACTGAGCAGCCTCTCAAAGAGGA...ATAAGAAGACAGAAGGAGAGGATTACTGAGCAGCCTCTCAAAGAGGAAGAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409216.5
ENST00000409395.3
CDS-3UTR GCA 90 bp CATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCTCCAAGTGATAACTTCCCTAAGGTTGGCTaGTCATCAGGTGTCACAGCT +
Preference number: 4 (lower is better)
Translates to: HYSTVKKRVNFHLPPSDNFPKVG*SSGVTA
Trigger: AGCTGTGACACCTGATGAGCAGCCAACCTTAGGGAA...GTTATCACTTGGAGGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR GCA 90 bp AAAAGAGAGTCAACTTCCACCTCCCTCCAAGTGATAACTCAAATAAGGCATAGATTCCCTAAGGTTGGCTaGTCATCAGGTGTCACAGCT +
Preference number: 4 (lower is better)
Translates to: KRESTSTSLQVITQIRHRFPKVG*SSGVTA
Trigger: AGCTGTGACACCTGATGAGCAGCCAACCTTAGGGAA...TCTATGCCTTATTTGAGTTATCACTTGGAGGGAGGTGGAAGTTGACTCTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR GCA 90 bp AAAAGAGAGTCAACTTCCACCTCCCTCCAAGTGATAACTCAAATAAGGCATAGACCCCAGGGGACTGACTaGTTAGTGCTTATCACACAA +
Preference number: 4 (lower is better)
Translates to: KRESTSTSLQVITQIRHRPQGTD*LVLITQ
Trigger: TTGTGTGATAAGCACTAAGCAGTCAGTCCCCTGGGG...TCTATGCCTTATTTGAGTTATCACTTGGAGGGAGGTGGAAGTTGACTCTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
CDS-3UTR CCA 90 bp TCCTTCTGTCTTCTTATTTCCTGGTTACTGCCACTCAGAGGAATCTTCTCCCACTGTAACATGTCAGCTTaGCTAGGTTTTCGAAATCCC +
Preference number: 4 (lower is better)
Translates to: SFCLLISWLLPLRGIFSHCNMSA*LGFRNP
Trigger: GGGATTTCGAAAACCTAGCCAAGCTGACATGTTACA...GTGGGAGAAGATTCCTCTGAGTGGCAGTAACCAGGAAATAAGAAGACAGAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409395.3
CDS-3UTR CCA 90 bp CTAGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCTCAGGTGTCACAGCTTaGGAACTGGCACTGCTCAGT +
Preference number: 4 (lower is better)
Translates to: LGLFPHYSTVKKRVNFHLSGVTA*ELALLS
Trigger: ACTGAGCAGTGCCAGTTCCCAAGCTGTGACACCTGA...GAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR TCA 90 bp CTAGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCGGAACATCTGTCATaGTGTGCGGTTGAATCCGAT +
Preference number: 4 (lower is better)
Translates to: LGLFPHYSTVKKRVNFHLPEHLS*CAVESD
Trigger: ATCGGATTCAACCGCACATCATGACAGATGTTCCGG...GAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR TCA 90 bp CTAGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCGGAATCTTCTCCCACTaGTGCCCTTCTCTGAATGTC +
Preference number: 4 (lower is better)
Translates to: LGLFPHYSTVKKRVNFHLGIFSH*CPSLNV
Trigger: GACATTCAGAGAAGGGCATCAGTGGGAGAAGATTCC...GAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR TCA 90 bp CATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCTCCAAGTGATAACTCATTCATTGTCTGGTaGGAGCACAGAGCTAAGAGG +
Preference number: 4 (lower is better)
Translates to: HYSTVKKRVNFHLPPSDNSFIVW*EHRAKR
Trigger: CCTCTTAGCTCTGTGCTCTCACCAGACAATGAATGA...GTTATCACTTGGAGGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
CDS-3UTR GCA 90 bp TTGAATCACAAAAGCTCAAGTAAACCTTCATGTGTAGCTACCAGTTTGTGTTCTCATCCCTGGCCTGTGTaGAGATGTTTCCTTGGACCA +
Preference number: 4 (lower is better)
Translates to: LNHKSSSKPSCVATSLCSHPWPV*RCFLGP
Trigger: TGGTCCAAGGAAACATCTGCACACAGGCCAGGGATG...AGAACACAAACTGGTAGCTACACATGAAGGTTTACTTGAGCTTTTGTGATTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397283.6
CDS-3UTR GCA 90 bp GGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCTTCCTCTTTGAGAGGCTaGTCAGTAATCCTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: GLFPHYSTVKKRVNFHLPSSLRG*SVILSF
Trigger: GAAGGAGAGGATTACTGAGCAGCCTCTCAAAGAGGA...AGGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR GCA 90 bp TGGAATAAGCATTTCTGGAGATATCACTCTTCTTCCCTAAGGTTGGCTGCTCATTGGGGAGTCCTCACTTaGATCACCTTCCTCTTTAAA +
Preference number: 4 (lower is better)
Translates to: WNKHFWRYHSSSLRLAAHWGVLT*ITFLFK
Trigger: TTTAAAGAGGAAGGTGATGCAAGTGAGGACTCCCCA...ATGAGCAGCCAACCTTAGGGAAGAAGAGTGATATCTCCAGAAATGCTTATTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409395.3
CDS-3UTR GCA 90 bp GGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCTTTTATAGCCGAATTATaGCAGATTCCCCCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: GLFPHYSTVKKRVNFHLPFIAEL*QIPPGD
Trigger: GTCCCCTGGGGGAATCTGGCATAATTCGGCTATAAA...AGGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
CDS-3UTR CCA 90 bp TATCTAGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACGCTAAGCGCCATCCCTaGCCTGTGTGCAGATGTTTC +
Preference number: 4 (lower is better)
Translates to: YLGLFPHYSTVKKRVNFHAKRHP*PVCRCF
Trigger: GAAACATCTGCACACAGGCCAGGGATGGCGCTTAGC...GTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCTAGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397283.6
CDS-3UTR CCA 90 bp TATTTCCTGGTTACTGCCACTCAGAGGAATCTTCTCCCACTGATGCCACAAAATTTGACCGTTTTCAGGTaGTTTATCCCCATTACACTC +
Preference number: 4 (lower is better)
Translates to: YFLVTATQRNLLPLMPQNLTVFR*FIPITL
Trigger: GAGTGTAATGGGGATAAACCACCTGAAAACGGTCAA...ATTTTGTGGCATCAGTGGGAGAAGATTCCTCTGAGTGGCAGTAACCAGGAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409925.1
CDS-3UTR CCA 90 bp GAATTAGCTTTTCCTTTAGTGGGCATGAGAATTTCTCAGTTCCAGTTAGTTTATTTCTACCCTGTAGTGTaGCAGGGGGCTGTCCACATC +
Preference number: 4 (lower is better)
Translates to: ELAFPLVGMRISQFQLVYFYPVV*QGAVHI
Trigger: GATGTGGACAGCCCCCTGCCACACTACAGGGTAGAA...ATAAACTAACTGGAACTGAGAAATTCTCATGCCCACTAAAGGAAAAGCTAATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409395.3
CDS-3UTR CCA 90 bp TATCTAGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACTTCTACCCTGTAGTGTaGCAGGGGGCTGTCCACATC +
Preference number: 4 (lower is better)
Translates to: YLGLFPHYSTVKKRVNFHFYPVV*QGAVHI
Trigger: GATGTGGACAGCCCCCTGCCACACTACAGGGTAGAA...GTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCTAGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR CCA 90 bp GGTTTTAATACCAGACTTTCCATCACTCCAATGTACAGGAAGAAAGATACCAAAGTGCACCTTCCAGACTaGGTTCTACCCTGTAGTGTG +
Preference number: 4 (lower is better)
Translates to: GFNTRLSITPMYRKKDTKVHLPD*VLPCSV
Trigger: CACACTACAGGGTAGAACCCAGTCTGGAAGGTGCAC...TTTGGTATCTTTCTTCCTGTACATTGGAGTGATGGAAAGTCTGGTATTAAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
CDS-3UTR CCA 90 bp TTCTTATTTCCTGGTTACTGCCACTCAGAGGAATCTTCTCCCACTGATGCCCTGTCAGCACTAGTTTCTTaGAGAGAAAGATCTGTGATA +
Preference number: 4 (lower is better)
Translates to: FLFPGYCHSEESSPTDALSALVS*RERSVI
Trigger: TATCACAGATCTTTCTCTCCAAGAAACTAGTGCTGA...CAGGGCATCAGTGGGAGAAGATTCCTCTGAGTGGCAGTAACCAGGAAATAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409216.5
CDS-3UTR CCA 90 bp TATCTAGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACACTGGCACTGCTCAGTaGGGAGTCCTCACTTGCATC +
Preference number: 4 (lower is better)
Translates to: YLGLFPHYSTVKKRVNFHTGTAQ*GVLTCI
Trigger: GATGCAAGTGAGGACTCCCCACTGAGCAGTGCCAGT...GTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCTAGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR CCA 90 bp TATCTAGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACTCACAGCTTGGGAACTaGCACTGCTCAGTGGGGAGT +
Preference number: 4 (lower is better)
Translates to: YLGLFPHYSTVKKRVNFHSQLGN*HCSVGS
Trigger: ACTCCCCACTGAGCAGTGCCAGTTCCCAAGCTGTGA...GTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCTAGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR CCA 90 bp TTGAATCACAAAAGCTCAAGTAAACCTTCATGTGTAGCTACCAGTTTGTGTTCTGGCTTTCGTGTAAGATaGCGGTATAGGGCCATGGAC +
Preference number: 4 (lower is better)
Translates to: LNHKSSSKPSCVATSLCSGFRVR*RYRAMD
Trigger: GTCCATGGCCCTATACCGCCATCTTACACGAAAGCC...AGAACACAAACTGGTAGCTACACATGAAGGTTTACTTGAGCTTTTGTGATTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
CDS-3UTR CCA 90 bp GGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCTTGGCTTTCAACTCTGTaGCTTTCGTGTAAGATGGCG +
Preference number: 4 (lower is better)
Translates to: GLFPHYSTVKKRVNFHLPWLSTL*LSCKMA
Trigger: CGCCATCTTACACGAAAGCCACAGAGTTGAAAGCCA...AGGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
CDS-3UTR CCA 90 bp AGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCCGGTTGAATCCGATCTaGAGAGAGAGCTTTAGGGAA +
Preference number: 4 (lower is better)
Translates to: RVISTLFYSEKESQLPPPRLNPI*RESFRE
Trigger: TTCCCTAAAGCTCTCTCTCCAGATCGGATTCAACCG...GGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR CCA 90 bp CATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCTCCAAGTGATAACCGGTTGAATCCGATCTaGAGAGAGAGCTTTAGGGAA +
Preference number: 4 (lower is better)
Translates to: HYSTVKKRVNFHLPPSDNRLNPI*RESFRE
Trigger: TTCCCTAAAGCTCTCTCTCCAGATCGGATTCAACCG...GTTATCACTTGGAGGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR TCA 90 bp GGTTTTAATACCAGACTTTCCATCACTCCAATGTACAGGAAGAAAGATACCAAACCGGAACATCTGTCATaGTGTGCGGTTGAATCCGAT +
Preference number: 4 (lower is better)
Translates to: GFNTRLSITPMYRKKDTKPEHLS*CAVESD
Trigger: ATCGGATTCAACCGCACATCATGACAGATGTTCCGG...TTTGGTATCTTTCTTCCTGTACATTGGAGTGATGGAAAGTCTGGTATTAAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
CDS-3UTR TCA 90 bp TCCTTCTGTCTTCTTATTTCCTGGTTACTGCCACTCAGAGGAATCTTCTCCCACTTAGTGATTGTTTGTTaGCCGTTTTCAGGTGGTTTA +
Preference number: 4 (lower is better)
Translates to: SFCLLISWLLPLRGIFSHLVIVC*PFSGGL
Trigger: TAAACCACCTGAAAACGGTCAACAAACAATCACTAA...GTGGGAGAAGATTCCTCTGAGTGGCAGTAACCAGGAAATAAGAAGACAGAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409216.5
ENST00000409395.3
CDS-3UTR TCA 90 bp TTCTTATTTCCTGGTTACTGCCACTCAGAGGAATCTTCTCCCACTGATGCCACATTAGTGATTGTTTGTTaGCCGTTTTCAGGTGGTTTA +
Preference number: 4 (lower is better)
Translates to: FLFPGYCHSEESSPTDATLVIVC*PFSGGL
Trigger: TAAACCACCTGAAAACGGTCAACAAACAATCACTAA...TGTGGCATCAGTGGGAGAAGATTCCTCTGAGTGGCAGTAACCAGGAAATAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409925.1
CDS-3UTR TCA 90 bp TTGAATCACAAAAGCTCAAGTAAACCTTCATGTGTAGCTACCAGTTTGTGTTCTCCTCCATGGATGAGTTaGGCAGCATGTTCCCTTGTA +
Preference number: 4 (lower is better)
Translates to: LNHKSSSKPSCVATSLCSPPWMS*AACSLV
Trigger: TACAAGGGAACATGCTGCTCAACTCATCCATGGAGG...AGAACACAAACTGGTAGCTACACATGAAGGTTTACTTGAGCTTTTGTGATTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
CDS-3UTR TCA 90 bp GGTTTTAATACCAGACTTTCCATCACTCCAATGTACAGGAAGAAAGATACCAAATTTGTCCTCCATGGATaGGTTGAGCAGCATGTTCCC +
Preference number: 4 (lower is better)
Translates to: GFNTRLSITPMYRKKDTKFVLHG*VEQHVP
Trigger: GGGAACATGCTGCTCAACTCATCCATGGAGGACAAA...TTTGGTATCTTTCTTCCTGTACATTGGAGTGATGGAAAGTCTGGTATTAAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
CDS-3UTR TCA 90 bp GGTTTTAATACCAGACTTTCCATCACTCCAATGTACAGGAAGAAAGATACCAAAGGAATCTTCTCCCACTaGTGCCCTTCTCTGAATGTC +
Preference number: 4 (lower is better)
Translates to: GFNTRLSITPMYRKKDTKGIFSH*CPSLNV
Trigger: GACATTCAGAGAAGGGCATCAGTGGGAGAAGATTCC...TTTGGTATCTTTCTTCCTGTACATTGGAGTGATGGAAAGTCTGGTATTAAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
CDS-3UTR TCA 90 bp CTAGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCTCATTCATTGTCTGGTaGGAGCACAGAGCTAAGAGG +
Preference number: 4 (lower is better)
Translates to: LGLFPHYSTVKKRVNFHLSFIVW*EHRAKR
Trigger: CCTCTTAGCTCTGTGCTCTCACCAGACAATGAATGA...GAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
CDS-3UTR GCA 90 bp CTAGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCTCCTCTTTGAGAGGCTaGTCAGTAATCCTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LGLFPHYSTVKKRVNFHLSSLRG*SVILSF
Trigger: GAAGGAGAGGATTACTGAGCAGCCTCTCAAAGAGGA...GAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR GCA 90 bp AAAAGAGAGTCAACTTCCACCTCCCTCCAAGTGATAACTCAAATAAGGCATAGATGGGGAGTCCTCACTTaGATCACCTTCCTCTTTAAA +
Preference number: 4 (lower is better)
Translates to: KRESTSTSLQVITQIRHRWGVLT*ITFLFK
Trigger: TTTAAAGAGGAAGGTGATGCAAGTGAGGACTCCCCA...TCTATGCCTTATTTGAGTTATCACTTGGAGGGAGGTGGAAGTTGACTCTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR GCA 90 bp AGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCTGGGGAGTCCTCACTTaGATCACCTTCCTCTTTAAA +
Preference number: 4 (lower is better)
Translates to: RVISTLFYSEKESQLPPPWGVLT*ITFLFK
Trigger: TTTAAAGAGGAAGGTGATGCAAGTGAGGACTCCCCA...GGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR GCA 90 bp GGTTTTAATACCAGACTTTCCATCACTCCAATGTACAGGAAGAAAGATACCAAACCCCAGGGGACTGACTaGTTAGTGCTTATCACACAA +
Preference number: 4 (lower is better)
Translates to: GFNTRLSITPMYRKKDTKPQGTD*LVLITQ
Trigger: TTGTGTGATAAGCACTAAGCAGTCAGTCCCCTGGGG...TTTGGTATCTTTCTTCCTGTACATTGGAGTGATGGAAAGTCTGGTATTAAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
CDS-3UTR GCA 90 bp CTAGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCTTTATAGCCGAATTATaGCAGATTCCCCCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: LGLFPHYSTVKKRVNFHLFIAEL*QIPPGD
Trigger: GTCCCCTGGGGGAATCTGGCATAATTCGGCTATAAA...GAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
CDS-3UTR GCA 90 bp AAAAGAGAGTCAACTTCCACCTCCCTCCAAGTGATAACTCAAATAAGGCATAGAATCCTGACTGACAATTaGTCATCTCCCTCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: KRESTSTSLQVITQIRHRILTDN*SSPSER
Trigger: TCTCTCAGAGGGAGATGAGCAATTGTCAGTCAGGAT...TCTATGCCTTATTTGAGTTATCACTTGGAGGGAGGTGGAAGTTGACTCTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
CDS-3UTR CCA 90 bp AGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCCGGTTGAATCCGATCTaGAGAGAGAGTCTTCATAAC +
Preference number: 4 (lower is better)
Translates to: RVISTLFYSEKESQLPPPRLNPI*RESLHN
Trigger: GTTATGAAGACTCTCTCTCCAGATCGGATTCAACCG...GGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397283.6
CDS-3UTR CCA 90 bp TCTTCTTCCTCTTTGAGAGGCTGCTCAGTAATCCTCTCCTTCTGTCTTCTTATTTTGACCGTTTTCAGGTaGTTTATCCCCATTACACTC +
Preference number: 4 (lower is better)
Translates to: SSSSLRGCSVILSFCLLILTVFR*FIPITL
Trigger: GAGTGTAATGGGGATAAACCACCTGAAAACGGTCAA...AATAAGAAGACAGAAGGAGAGGATTACTGAGCAGCCTCTCAAAGAGGAAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409216.5
ENST00000409395.3
CDS-3UTR CCA 90 bp TATCTAGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACGTGCACCTTCCAGACTaGGTTCTACCCTGTAGTGTG +
Preference number: 4 (lower is better)
Translates to: YLGLFPHYSTVKKRVNFHVHLPD*VLPCSV
Trigger: CACACTACAGGGTAGAACCCAGTCTGGAAGGTGCAC...GTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCTAGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR CCA 90 bp TCTTCTTATTTCCTGGTTACTGCCACTCAGAGGAATCTTCTCCCACTGATGCCATCAGCACTAGTTTCTTaGAGAGAAAGATCTGTGATA +
Preference number: 4 (lower is better)
Translates to: SSYFLVTATQRNLLPLMPSALVS*RERSVI
Trigger: TATCACAGATCTTTCTCTCCAAGAAACTAGTGCTGA...TGGCATCAGTGGGAGAAGATTCCTCTGAGTGGCAGTAACCAGGAAATAAGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409925.1
CDS-3UTR CCA 90 bp TATCTAGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACGGCTTTCGTGTAAGATaGCGGTATAGGGCCATGGAC +
Preference number: 4 (lower is better)
Translates to: YLGLFPHYSTVKKRVNFHGFRVR*RYRAMD
Trigger: GTCCATGGCCCTATACCGCCATCTTACACGAAAGCC...GTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCTAGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
CDS-3UTR TCA 90 bp TCATCTTCTTCCTCTTTGAGAGGCTGCTCAGTAATCCTCTCCTTCTGTCTTCTTTTAGTGATTGTTTGTTaGCCGTTTTCAGGTGGTTTA +
Preference number: 4 (lower is better)
Translates to: SSSSSLRGCSVILSFCLLLVIVC*PFSGGL
Trigger: TAAACCACCTGAAAACGGTCAACAAACAATCACTAA...AAGAAGACAGAAGGAGAGGATTACTGAGCAGCCTCTCAAAGAGGAAGAAGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409216.5
ENST00000409395.3
CDS-3UTR GCA 90 bp ATCTTCTTCCTCTTTGAGAGGCTGCTCAGTAATCCTCTCCTTCTGTCTTCTTATTTATTTCCTGGTTACTaGCACTCAGAGGAATCTTCT +
Preference number: 4 (lower is better)
Translates to: IFFLFERLLSNPLLLSSYLFPGY*HSEESS
Trigger: AGAAGATTCCTCTGAGTGGCAGTAACCAGGAAATAA...ATAAGAAGACAGAAGGAGAGGATTACTGAGCAGCCTCTCAAAGAGGAAGAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409216.5
ENST00000409395.3
CDS-3UTR GCA 90 bp TTGAATCACAAAAGCTCAAGTAAACCTTCATGTGTAGCTACCAGTTTGTGTTCTTCCTCTTTGAGAGGCTaGTCAGTAATCCTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LNHKSSSKPSCVATSLCSSSLRG*SVILSF
Trigger: GAAGGAGAGGATTACTGAGCAGCCTCTCAAAGAGGA...AGAACACAAACTGGTAGCTACACATGAAGGTTTACTTGAGCTTTTGTGATTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
CDS-3UTR GCA 90 bp ACCTTCTGCTCCTCATCATGTTTAGAATGTAACATGTCAGCTTGGCTAGGTTTTCCATTCAATTTCAGCTaGCTGGTGACCTTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: TFCSSSCLECNMSAWLGFPFNFS*LVTFVL
Trigger: AAGAACAAAGGTCACCAGGCAGCTGAAATTGAATGG...AAAACCTAGCCAAGCTGACATGTTACATTCTAAACATGATGAGGAGCAGAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409395.3
CDS-3UTR GCA 90 bp AGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCCCATTCAATTTCAGCTaGCTGGTGACCTTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: RVISTLFYSEKESQLPPPPFNFS*LVTFVL
Trigger: AAGAACAAAGGTCACCAGGCAGCTGAAATTGAATGG...GGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR GCA 90 bp CTAGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCTGGGGAGTCCTCACTTaGATCACCTTCCTCTTTAAA +
Preference number: 4 (lower is better)
Translates to: LGLFPHYSTVKKRVNFHLWGVLT*ITFLFK
Trigger: TTTAAAGAGGAAGGTGATGCAAGTGAGGACTCCCCA...GAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR GCA 90 bp CTAGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCATCCTGACTGACAATTaGTCATCTCCCTCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: LGLFPHYSTVKKRVNFHLILTDN*SSPSER
Trigger: TCTCTCAGAGGGAGATGAGCAATTGTCAGTCAGGAT...GAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
CDS-3UTR CCA 90 bp GGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCTTTGACCGTTTTCAGGTaGTTTATCCCCATTACACTC +
Preference number: 4 (lower is better)
Translates to: GLFPHYSTVKKRVNFHLPLTVFR*FIPITL
Trigger: GAGTGTAATGGGGATAAACCACCTGAAAACGGTCAA...AGGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR CCA 90 bp TCCTCATCATGTTTAGAATGTAACATGTCAGCTTGGCTAGGTTTTCGAAATCCCTTGACCGTTTTCAGGTaGTTTATCCCCATTACACTC +
Preference number: 4 (lower is better)
Translates to: SSSCLECNMSAWLGFRNPLTVFR*FIPITL
Trigger: GAGTGTAATGGGGATAAACCACCTGAAAACGGTCAA...GGGATTTCGAAAACCTAGCCAAGCTGACATGTTACATTCTAAACATGATGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409395.3
CDS-3UTR CCA 90 bp AGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCTGTAACATGTCAGCTTaGCTAGGTTTTCGAAATCCC +
Preference number: 4 (lower is better)
Translates to: RVISTLFYSEKESQLPPPCNMSA*LGFRNP
Trigger: GGGATTTCGAAAACCTAGCCAAGCTGACATGTTACA...GGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR CCA 90 bp GGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCTAGACAGAAAGTTGTCTaGGGTCACAGCTGTCAAATA +
Preference number: 4 (lower is better)
Translates to: GLFPHYSTVKKRVNFHLPRQKVV*GHSCQI
Trigger: TATTTGACAGCTGTGACCCCAGACAACTTTCTGTCT...AGGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409395.3
CDS-3UTR TCA 90 bp ATCTTCTTCCTCTTTGAGAGGCTGCTCAGTAATCCTCTCCTTCTGTCTTCTTATCACATTATTCTACAGTaGAAAAGAGAGTCAACTTCC +
Preference number: 4 (lower is better)
Translates to: IFFLFERLLSNPLLLSSYHIILQ*KRESTS
Trigger: GGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTG...ATAAGAAGACAGAAGGAGAGGATTACTGAGCAGCCTCTCAAAGAGGAAGAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409395.3
CDS-3UTR TCA 90 bp TTGAATCACAAAAGCTCAAGTAAACCTTCATGTGTAGCTACCAGTTTGTGTTCTCACCATTATGTTACCTaGGGTCACTTAACTCTGTGG +
Preference number: 4 (lower is better)
Translates to: LNHKSSSKPSCVATSLCSHHYVT*GHLTLW
Trigger: CCACAGAGTTAAGTGACCTCAGGTAACATAATGGTG...AGAACACAAACTGGTAGCTACACATGAAGGTTTACTTGAGCTTTTGTGATTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
CDS-3UTR TCA 90 bp GGTTTTAATACCAGACTTTCCATCACTCCAATGTACAGGAAGAAAGATACCAAAATCCCCCATGCAATCTaGATCAGACCTTTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: GFNTRLSITPMYRKKDTKIPHAI*IRPLSF
Trigger: GAAAGACAAAGGTCTGATTCAGATTGCATGGGGGAT...TTTGGTATCTTTCTTCCTGTACATTGGAGTGATGGAAAGTCTGGTATTAAAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
CDS-3UTR TCA 90 bp CTAGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCACCACCCCTGAACTTTaGATCACAAAAGCTCAAGTA +
Preference number: 4 (lower is better)
Translates to: LGLFPHYSTVKKRVNFHLTTPEL*ITKAQV
Trigger: TACTTGAGCTTTTGTGATTCAAAGTTCAGGGGTGGT...GAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
CDS-3UTR GCA 90 bp AAAAGAGAGTCAACTTCCACCTCCCTCCAAGTGATAACTCAAATAAGGCATAGATTATTTCCTGGTTACTaGCACTCAGAGGAATCTTCT +
Preference number: 4 (lower is better)
Translates to: KRESTSTSLQVITQIRHRLFPGY*HSEESS
Trigger: AGAAGATTCCTCTGAGTGGCAGTAACCAGGAAATAA...TCTATGCCTTATTTGAGTTATCACTTGGAGGGAGGTGGAAGTTGACTCTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR GCA 90 bp AGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCTTATTTCCTGGTTACTaGCACTCAGAGGAATCTTCT +
Preference number: 4 (lower is better)
Translates to: RVISTLFYSEKESQLPPPLFPGY*HSEESS
Trigger: AGAAGATTCCTCTGAGTGGCAGTAACCAGGAAATAA...GGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR GCA 90 bp CATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCTCCAAGTGATAACTCATCCCAAACCTTCTaGTCCTCATCATGTTTAGAA +
Preference number: 4 (lower is better)
Translates to: HYSTVKKRVNFHLPPSDNSSQTF*SSSCLE
Trigger: TTCTAAACATGATGAGGAGCAGAAGGTTTGGGATGA...GTTATCACTTGGAGGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR GCA 90 bp GGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCTTCATCCCAAACCTTCTaGTCCTCATCATGTTTAGAA +
Preference number: 4 (lower is better)
Translates to: GLFPHYSTVKKRVNFHLPSSQTF*SSSCLE
Trigger: TTCTAAACATGATGAGGAGCAGAAGGTTTGGGATGA...AGGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR CCA 90 bp TATCTAGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCCATTACACTCAGCCTaGGTAAATGTAGCCGGAACA +
Preference number: 4 (lower is better)
Translates to: YLGLFPHYSTVKKRVNFHPLHSA*VNVAGT
Trigger: TGTTCCGGCTACATTTACCCAGGCTGAGTGTAATGG...GTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCTAGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR CCA 90 bp TGGAATAAGCATTTCTGGAGATATCACTCTTCTTCCCTAAGGTTGGCTGCTCATTGGAATAAGCATTTCTaGAGATATCACTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: WNKHFWRYHSSSLRLAAHWNKHF*RYHSSS
Trigger: GGAAGAAGAGTGATATCTCCAGAAATGCTTATTCCA...ATGAGCAGCCAACCTTAGGGAAGAAGAGTGATATCTCCAGAAATGCTTATTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409395.3
CDS-3UTR CCA 90 bp AGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCAAAGGCACAGAATTTTaGAAGGCTTATTGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: RVISTLFYSEKESQLPPPKGTEF*KAYCQS
Trigger: ACTCTGGCAATAAGCCTTCCAAAATTCTGTGCCTTT...GGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
CDS-3UTR CCA 90 bp CATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCTCCAAGTGATAACAAAGGCACAGAATTTTaGAAGGCTTATTGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: HYSTVKKRVNFHLPPSDNKGTEF*KAYCQS
Trigger: ACTCTGGCAATAAGCCTTCCAAAATTCTGTGCCTTT...GTTATCACTTGGAGGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
CDS-3UTR CCA 90 bp TATCTAGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACTGGCTTTCAACTCTGTaGCTTTCGTGTAAGATGGCG +
Preference number: 4 (lower is better)
Translates to: YLGLFPHYSTVKKRVNFHWLSTL*LSCKMA
Trigger: CGCCATCTTACACGAAAGCCACAGAGTTGAAAGCCA...GTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCTAGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
CDS-3UTR TCA 90 bp CTAGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCTTCATAACAGTCTTCTaGGGTAGGTGCTGTTGTTAT +
Preference number: 4 (lower is better)
Translates to: LGLFPHYSTVKKRVNFHLFITVF*GRCCCY
Trigger: ATAACAACAGCACCTACCTCAGAAGACTGTTATGAA...GAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397283.6
CDS-3UTR TCA 90 bp AAAAGAGAGTCAACTTCCACCTCCCTCCAAGTGATAACTCAAATAAGGCATAGATTAGTGATTGTTTGTTaGCCGTTTTCAGGTGGTTTA +
Preference number: 4 (lower is better)
Translates to: KRESTSTSLQVITQIRHRLVIVC*PFSGGL
Trigger: TAAACCACCTGAAAACGGTCAACAAACAATCACTAA...TCTATGCCTTATTTGAGTTATCACTTGGAGGGAGGTGGAAGTTGACTCTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR TCA 90 bp AGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCTTAGTGATTGTTTGTTaGCCGTTTTCAGGTGGTTTA +
Preference number: 4 (lower is better)
Translates to: RVISTLFYSEKESQLPPPLVIVC*PFSGGL
Trigger: TAAACCACCTGAAAACGGTCAACAAACAATCACTAA...GGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR TCA 90 bp AGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCCACATTATTCTACAGTaGAAAAGAGAGTCAACTTCC +
Preference number: 4 (lower is better)
Translates to: RVISTLFYSEKESQLPPPHIILQ*KRESTS
Trigger: GGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTG...GGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR TCA 90 bp CATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCTCCAAGTGATAACCACATTATTCTACAGTaGAAAAGAGAGTCAACTTCC +
Preference number: 4 (lower is better)
Translates to: HYSTVKKRVNFHLPPSDNHIILQ*KRESTS
Trigger: GGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTG...GTTATCACTTGGAGGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR TCA 90 bp TATCTAGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCACCATTATGTTACCTaGGGTCACTTAACTCTGTGG +
Preference number: 4 (lower is better)
Translates to: YLGLFPHYSTVKKRVNFHHHYVT*GHLTLW
Trigger: CCACAGAGTTAAGTGACCTCAGGTAACATAATGGTG...GTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCTAGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
CDS-3UTR TCA 90 bp TATCTAGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACATCCCCCATGCAATCTaGATCAGACCTTTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: YLGLFPHYSTVKKRVNFHIPHAI*IRPLSF
Trigger: GAAAGACAAAGGTCTGATTCAGATTGCATGGGGGAT...GTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCTAGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
CDS-3UTR GCA 90 bp GGTTTTAATACCAGACTTTCCATCACTCCAATGTACAGGAAGAAAGATACCAAACCATTCAATTTCAGCTaGCTGGTGACCTTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: GFNTRLSITPMYRKKDTKPFNFS*LVTFVL
Trigger: AAGAACAAAGGTCACCAGGCAGCTGAAATTGAATGG...TTTGGTATCTTTCTTCCTGTACATTGGAGTGATGGAAAGTCTGGTATTAAAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
CDS-3UTR GCA 90 bp CTAGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCTCATCCCAAACCTTCTaGTCCTCATCATGTTTAGAA +
Preference number: 4 (lower is better)
Translates to: LGLFPHYSTVKKRVNFHLSSQTF*SSSCLE
Trigger: TTCTAAACATGATGAGGAGCAGAAGGTTTGGGATGA...GAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR GCA 90 bp AAAAGAGAGTCAACTTCCACCTCCCTCCAAGTGATAACTCAAATAAGGCATAGATTTTGGAAGGCTTATTaGCAGAGTCTGCAAAATCAA +
Preference number: 4 (lower is better)
Translates to: KRESTSTSLQVITQIRHRFWKAY*QSLQNQ
Trigger: TTGATTTTGCAGACTCTGGCAATAAGCCTTCCAAAA...TCTATGCCTTATTTGAGTTATCACTTGGAGGGAGGTGGAAGTTGACTCTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
CDS-3UTR GCA 90 bp CATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCTCCAAGTGATAACGTTAAAAATCCCCCATaGAATCTGAATCAGACCTTT +
Preference number: 4 (lower is better)
Translates to: HYSTVKKRVNFHLPPSDNVKNPP*NLNQTF
Trigger: AAAGGTCTGATTCAGATTGCATGGGGGATTTTTAAC...GTTATCACTTGGAGGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
CDS-3UTR CCA 90 bp TCCTCATCATGTTTAGAATGTAACATGTCAGCTTGGCTAGGTTTTCGAAATCCCTCAGCACTAGTTTCTTaGAGAGAAAGATCTGTGATA +
Preference number: 4 (lower is better)
Translates to: SSSCLECNMSAWLGFRNPSALVS*RERSVI
Trigger: TATCACAGATCTTTCTCTCCAAGAAACTAGTGCTGA...GGGATTTCGAAAACCTAGCCAAGCTGACATGTTACATTCTAAACATGATGAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409395.3
CDS-3UTR CCA 90 bp GGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCTTCAGCACTAGTTTCTTaGAGAGAAAGATCTGTGATA +
Preference number: 4 (lower is better)
Translates to: GLFPHYSTVKKRVNFHLPSALVS*RERSVI
Trigger: TATCACAGATCTTTCTCTCCAAGAAACTAGTGCTGA...AGGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
CDS-3UTR CCA 90 bp TTGAATCACAAAAGCTCAAGTAAACCTTCATGTGTAGCTACCAGTTTGTGTTCTTGTAACATGTCAGCTTaGCTAGGTTTTCGAAATCCC +
Preference number: 4 (lower is better)
Translates to: LNHKSSSKPSCVATSLCSCNMSA*LGFRNP
Trigger: GGGATTTCGAAAACCTAGCCAAGCTGACATGTTACA...AGAACACAAACTGGTAGCTACACATGAAGGTTTACTTGAGCTTTTGTGATTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
CDS-3UTR CCA 90 bp GGTTTTAATACCAGACTTTCCATCACTCCAATGTACAGGAAGAAAGATACCAAATGTAACATGTCAGCTTaGCTAGGTTTTCGAAATCCC +
Preference number: 4 (lower is better)
Translates to: GFNTRLSITPMYRKKDTKCNMSA*LGFRNP
Trigger: GGGATTTCGAAAACCTAGCCAAGCTGACATGTTACA...TTTGGTATCTTTCTTCCTGTACATTGGAGTGATGGAAAGTCTGGTATTAAAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
CDS-3UTR CCA 90 bp AGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCTGGAATAAGCATTTCTaGAGATATCACTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: RVISTLFYSEKESQLPPPWNKHF*RYHSSS
Trigger: GGAAGAAGAGTGATATCTCCAGAAATGCTTATTCCA...GGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR CCA 90 bp AGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCTTACAAAGACTCAAATaGCCAACCATCACCATTATG +
Preference number: 4 (lower is better)
Translates to: RVISTLFYSEKESQLPPPLQRLK*PTITIM
Trigger: CATAATGGTGATGGTTGGCCATTTGAGTCTTTGTAA...GGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
CDS-3UTR CCA 90 bp AAAAGAGAGTCAACTTCCACCTCCCTCCAAGTGATAACTCAAATAAGGCATAGATTACAAAGACTCAAATaGCCAACCATCACCATTATG +
Preference number: 4 (lower is better)
Translates to: KRESTSTSLQVITQIRHRLQRLK*PTITIM
Trigger: CATAATGGTGATGGTTGGCCATTTGAGTCTTTGTAA...TCTATGCCTTATTTGAGTTATCACTTGGAGGGAGGTGGAAGTTGACTCTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
3UTR CAA 72 bp CCCTTCTCTGAATGTCATTTCATCAGCACTAGTTTCTaGGAGAGAAAGATCTGTGATAGCCTTATGAACAAT +
Preference number: 4 (lower is better)
Translates to: PFSECHFISTSF*ERKICDSLMNN
Trigger: ATTGTTCATAAGGCTATCACAGATCTTTCTCTCCAAGAAACTAGTGCTGATGAAATGACATTCAGAGAAGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409395.3
CDS-3UTR TCA 90 bp TATCTAGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACACCACCCCTGAACTTTaGATCACAAAAGCTCAAGTA +
Preference number: 4 (lower is better)
Translates to: YLGLFPHYSTVKKRVNFHTTPEL*ITKAQV
Trigger: TACTTGAGCTTTTGTGATTCAAAGTTCAGGGGTGGT...GTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCTAGATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
CDS-3UTR GCA 90 bp TATCTAGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCCATTCAATTTCAGCTaGCTGGTGACCTTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: YLGLFPHYSTVKKRVNFHPFNFS*LVTFVL
Trigger: AAGAACAAAGGTCACCAGGCAGCTGAAATTGAATGG...GTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCTAGATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR GCA 90 bp CTAGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCTTTTGGAAGGCTTATTaGCAGAGTCTGCAAAATCAA +
Preference number: 4 (lower is better)
Translates to: LGLFPHYSTVKKRVNFHLFWKAY*QSLQNQ
Trigger: TTGATTTTGCAGACTCTGGCAATAAGCCTTCCAAAA...GAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
CDS-3UTR GCA 90 bp CTAGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCCACTAAAAATACATaGTCACGCTCTACTTTGAAA +
Preference number: 4 (lower is better)
Translates to: LGLFPHYSTVKKRVNFHLPTKNT*SRSTLK
Trigger: TTTCAAAGTAGAGCGTGAGCATGTATTTTTAGTGGG...GAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
CDS-3UTR CCA 90 bp TATCTAGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACTTGACCGTTTTCAGGTaGTTTATCCCCATTACACTC +
Preference number: 4 (lower is better)
Translates to: YLGLFPHYSTVKKRVNFHLTVFR*FIPITL
Trigger: GAGTGTAATGGGGATAAACCACCTGAAAACGGTCAA...GTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCTAGATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR CCA 90 bp CATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCTCCAAGTGATAACATCCATCATCTCTGTTaGAATAACTCAAAATACAGG +
Preference number: 4 (lower is better)
Translates to: HYSTVKKRVNFHLPPSDNIHHLC*NNSKYR
Trigger: CCTGTATTTTGAGTTATTCCAACAGAGATGATGGAT...GTTATCACTTGGAGGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
CDS-3UTR CCA 90 bp GGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCTATCCATCATCTCTGTTaGAATAACTCAAAATACAGG +
Preference number: 4 (lower is better)
Translates to: GLFPHYSTVKKRVNFHLPIHHLC*NNSKYR
Trigger: CCTGTATTTTGAGTTATTCCAACAGAGATGATGGAT...AGGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
CDS-3UTR GCA 90 bp TTGAATCACAAAAGCTCAAGTAAACCTTCATGTGTAGCTACCAGTTTGTGTTCTGTTAAAAATCCCCCATaGAATCTGAATCAGACCTTT +
Preference number: 4 (lower is better)
Translates to: LNHKSSSKPSCVATSLCSVKNPP*NLNQTF
Trigger: AAAGGTCTGATTCAGATTGCATGGGGGATTTTTAAC...AGAACACAAACTGGTAGCTACACATGAAGGTTTACTTGAGCTTTTGTGATTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
CDS-3UTR CCA 90 bp GGTTTTAATACCAGACTTTCCATCACTCCAATGTACAGGAAGAAAGATACCAAATCAGCACTAGTTTCTTaGAGAGAAAGATCTGTGATA +
Preference number: 4 (lower is better)
Translates to: GFNTRLSITPMYRKKDTKSALVS*RERSVI
Trigger: TATCACAGATCTTTCTCTCCAAGAAACTAGTGCTGA...TTTGGTATCTTTCTTCCTGTACATTGGAGTGATGGAAAGTCTGGTATTAAAACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
CDS-3UTR CCA 90 bp TTGAATCACAAAAGCTCAAGTAAACCTTCATGTGTAGCTACCAGTTTGTGTTCTTGGAATAAGCATTTCTaGAGATATCACTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: LNHKSSSKPSCVATSLCSWNKHF*RYHSSS
Trigger: GGAAGAAGAGTGATATCTCCAGAAATGCTTATTCCA...AGAACACAAACTGGTAGCTACACATGAAGGTTTACTTGAGCTTTTGTGATTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
CDS-3UTR TCA 90 bp TATCTAGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACTTAGTGATTGTTTGTTaGCCGTTTTCAGGTGGTTTA +
Preference number: 4 (lower is better)
Translates to: YLGLFPHYSTVKKRVNFHLVIVC*PFSGGL
Trigger: TAAACCACCTGAAAACGGTCAACAAACAATCACTAA...GTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCTAGATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR CCA 90 bp TATCTAGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACTGGAATAAGCATTTCTaGAGATATCACTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: YLGLFPHYSTVKKRVNFHWNKHF*RYHSSS
Trigger: GGAAGAAGAGTGATATCTCCAGAAATGCTTATTCCA...GTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCTAGATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR CCA 90 bp TATCTAGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACGGTAGGTTAAAAACATaGTCCTGTTATGTGATAGAT +
Preference number: 4 (lower is better)
Translates to: YLGLFPHYSTVKKRVNFHGRLKT*SCYVID
Trigger: ATCTATCACATAACAGGACCATGTTTTTAACCTACC...GTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCTAGATA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
CDS GCA 90 bp AGAGTTTGCAGCACAGATGAAGCTAAGCGCCATCCCTGGCCTGTGTaGAGATGTTTCCTTGGACCAGAGATCCCACAGGGGTTCGGCATT +
Preference number: 5 (lower is better)
Translates to: RVCSTDEAKRHPWPV*RCFLGPEIPQGFGI
Trigger: AATGCCGAACCCCTGTGGGATCTCTGGTCCAAGGAAACATCTGCACACAGGCCAGGGATGGCGCTTAGCTTCATCTGTGCTGCAAACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397283.6
CDS CCA 90 bp CTACTGATGAGAGTTTGCAGCACAGATGAAGCTAAGCGCCATCCCTaGCCTGTGTGCAGATGTTTCCTTGGACCAGAGATCCCACAGGGG +
Preference number: 5 (lower is better)
Translates to: LLMRVCSTDEAKRHP*PVCRCFLGPEIPQG
Trigger: CCCCTGTGGGATCTCTGGTCCAAGGAAACATCTGCACACAGGCCAGGGATGGCGCTTAGCTTCATCTGTGCTGCAAACTCTCATCAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397283.6
CDS GCA 90 bp TCAGCTAGTAAGGTCACAGAGCCAGCAAGCCTACTGATGAGAGTTTaGAGCACAGATGAAGCTAAGCGCCATCCCTGGCCTGTGTGCAGA +
Preference number: 5 (lower is better)
Translates to: SASKVTEPASLLMRV*STDEAKRHPWPVCR
Trigger: TCTGCACACAGGCCAGGGATGGCGCTTAGCTTCATCTGTGCTGCAAACTCTCATCAGTAGGCTTGCTGGCTCTGTGACCTTACTAGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397283.6
CDS CCA 90 bp TCCTTTGGTGAGTGCACCTTCCAGACTGGGTTCTACCCTGTAGTGTaGCAGGGGGCTGTCCACATCAGTCAATTCCTCACTGATTTTAGT +
Preference number: 5 (lower is better)
Translates to: SFGECTFQTGFYPVV*QGAVHISQFLTDFS
Trigger: ACTAAAATCAGTGAGGAATTGACTGATGTGGACAGCCCCCTGCCACACTACAGGGTAGAACCCAGTCTGGAAGGTGCACTCACCAAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000397283.6
ENST00000409216.5
ENST00000409395.3
ENST00000409925.1
ENST00000410096.6
ENST00000411762.5
ENST00000419116.2
ENST00000420317.5
ENST00000420719.6
CDS-3UTR CAA 90 bp TTCCTGGTTACTGCCACTCAGAGGAATCTTCTCCCACTGATGCCACAAAATAGCAGGCAGGAGAATCGCTaGAACCCTGGAGACAGAGGT +
Preference number: 5 (lower is better)
Translates to: FLVTATQRNLLPLMPQNSRQENR*NPGDRG
Trigger: ACCTCTGTCTCCAGGGTTCAAGCGATTCTCCTGCCT...GCTATTTTGTGGCATCAGTGGGAGAAGATTCCTCTGAGTGGCAGTAACCAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409925.1
CDS-3UTR CAA 90 bp CCTTCTGTCTTCTTATTTCCTGGTTACTGCCACTCAGAGGAATCTTCTCCCACTAGGCAGGAGAATCGCTaGAACCCTGGAGACAGAGGT +
Preference number: 5 (lower is better)
Translates to: PSVFLFPGYCHSEESSPTRQENR*NPGDRG
Trigger: ACCTCTGTCTCCAGGGTTCAAGCGATTCTCCTGCCT...AGTGGGAGAAGATTCCTCTGAGTGGCAGTAACCAGGAAATAAGAAGACAGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409216.5
CDS TCA 90 bp TCAGCCTGGGTAAATGTAGCCGGAACATCTGTCATGATGTGCGGTTaGATCCGATCTGGAGAGAGAGCTTTAAAAGTGTGTCTAGGGCTG +
Preference number: 5 (lower is better)
Translates to: SAWVNVAGTSVMMCG*IRSGERALKVCLGL
Trigger: CAGCCCTAGACACACTTTTAAAGCTCTCTCTCCAGATCGGATTCAACCGCACATCATGACAGATGTTCCGGCTACATTTACCCAGGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411762.5
CDS-3UTR CAA 90 bp TTCTTATTTCCTGGTTACTGCCACTCAGAGGAATCTTCTCCCACTGATGCCCTGTGTCATGATGTGCGGTaGAATCCGATCTGGAGAGAG +
Preference number: 5 (lower is better)
Translates to: FLFPGYCHSEESSPTDALCHDVR*NPIWRE
Trigger: CTCTCTCCAGATCGGATTCAACCGCACATCATGACA...CAGGGCATCAGTGGGAGAAGATTCCTCTGAGTGGCAGTAACCAGGAAATAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409216.5
CDS-3UTR CAA 90 bp TTCCTGGTTACTGCCACTCAGAGGAATCTTCTCCCACTGATGCCCTGTAATCCCTCATCTTCTTCCTCTTaGAGAGGCTGCTCAGTAATC +
Preference number: 5 (lower is better)
Translates to: FLVTATQRNLLPLMPCNPSSSSS*RGCSVI
Trigger: GATTACTGAGCAGCCTCTCAAAGAGGAAGAAGATGA...GGGATTACAGGGCATCAGTGGGAGAAGATTCCTCTGAGTGGCAGTAACCAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409216.5
CDS-3UTR CAA 90 bp AGGAATCTTCTCCCACTGATGCCACAAAATAGCTGGGCGTGGTGTCAGGTGCCTATCAGCACTAGTTTCTaGGAGAGAAAGATCTGTGAT +
Preference number: 5 (lower is better)
Translates to: RNLLPLMPQNSWAWCQVPISTSF*ERKICD
Trigger: ATCACAGATCTTTCTCTCCAAGAAACTAGTGCTGAT...AGGCACCTGACACCACGCCCAGCTATTTTGTGGCATCAGTGGGAGAAGATTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409925.1
CDS-3UTR CAA 90 bp CTTCTGTCTTCTTATTTCCTGGTTACTGCCACTCAGAGGAATCTTCTCCCACTGCAAAAGCAAGAGGATTaGTCAGATCTGCCAGGAGCC +
Preference number: 5 (lower is better)
Translates to: LLSSYFLVTATQRNLLPLQKQED*SDLPGA
Trigger: GGCTCCTGGCAGATCTGACAAATCCTCTTGCTTTTG...CAGTGGGAGAAGATTCCTCTGAGTGGCAGTAACCAGGAAATAAGAAGACAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409395.3
CDS-3UTR CAA 90 bp TTCCTGGTTACTGCCACTCAGAGGAATCTTCTCCCACTGATGCCCTGTAATCCCGATTTTAGTGATTGTTaGTTGACCGTTTTCAGGTGG +
Preference number: 5 (lower is better)
Translates to: FLVTATQRNLLPLMPCNPDFSDC*LTVFRW
Trigger: CCACCTGAAAACGGTCAACAAACAATCACTAAAATC...GGGATTACAGGGCATCAGTGGGAGAAGATTCCTCTGAGTGGCAGTAACCAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409216.5
CDS-3UTR CAA 90 bp TCATCTTCTTCCTCTTTGAGAGGCTGCTCAGTAATCCTCTCCTTCTGTCTTCTTTCCTCCATGGATGAGTaGAGCAGCATGTTCCCTTGT +
Preference number: 5 (lower is better)
Translates to: SSSSSLRGCSVILSFCLLSSMDE*SSMFPC
Trigger: ACAAGGGAACATGCTGCTCAACTCATCCATGGAGGA...AAGAAGACAGAAGGAGAGGATTACTGAGCAGCCTCTCAAAGAGGAAGAAGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409216.5
ENST00000409395.3
CDS-3UTR CAA 90 bp TATTTCCTGGTTACTGCCACTCAGAGGAATCTTCTCCCACTGATGCCACAAAATTCCTCCATGGATGAGTaGAGCAGCATGTTCCCTTGT +
Preference number: 5 (lower is better)
Translates to: YFLVTATQRNLLPLMPQNSSMDE*SSMFPC
Trigger: ACAAGGGAACATGCTGCTCAACTCATCCATGGAGGA...ATTTTGTGGCATCAGTGGGAGAAGATTCCTCTGAGTGGCAGTAACCAGGAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409925.1
CDS-3UTR CAA 90 bp AGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCATCAGGTGTCACAGCTaGGGAACTGGCACTGCTCAG +
Preference number: 5 (lower is better)
Translates to: RVISTLFYSEKESQLPPPIRCHS*GTGTAQ
Trigger: CTGAGCAGTGCCAGTTCCCAAGCTGTGACACCTGAT...GGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR CAA 90 bp CATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCTCCAAGTGATAACATCAGGTGTCACAGCTaGGGAACTGGCACTGCTCAG +
Preference number: 5 (lower is better)
Translates to: HYSTVKKRVNFHLPPSDNIRCHS*GTGTAQ
Trigger: CTGAGCAGTGCCAGTTCCCAAGCTGTGACACCTGAT...GTTATCACTTGGAGGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR CAA 90 bp ACCTTCTGCTCCTCATCATGTTTAGAATGTAACATGTCAGCTTGGCTAGGTTTTTCGGGAGACAGAAAGTaGTCTGGGGTCACAGCTGTC +
Preference number: 5 (lower is better)
Translates to: TFCSSSCLECNMSAWLGFSGDRK*SGVTAV
Trigger: GACAGCTGTGACCCCAGACAACTTTCTGTCTCCCGA...AAAACCTAGCCAAGCTGACATGTTACATTCTAAACATGATGAGGAGCAGAAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409395.3
CDS-3UTR CAA 90 bp CATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCTCCAAGTGATAACTGTGCAGATGTTTCCTaGGACCAGAGATCCCACAGG +
Preference number: 5 (lower is better)
Translates to: HYSTVKKRVNFHLPPSDNCADVS*DQRSHR
Trigger: CCTGTGGGATCTCTGGTCCAAGGAAACATCTGCACA...GTTATCACTTGGAGGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397283.6
CDS-3UTR CAA 90 bp CTAGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCATCAGGTGTCACAGCTaGGGAACTGGCACTGCTCAG +
Preference number: 5 (lower is better)
Translates to: LGLFPHYSTVKKRVNFHLIRCHS*GTGTAQ
Trigger: CTGAGCAGTGCCAGTTCCCAAGCTGTGACACCTGAT...GAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR CAA 90 bp AAAAGAGAGTCAACTTCCACCTCCCTCCAAGTGATAACTCAAATAAGGCATAGATTCGGCATTAGCACCTaGGCAGTAGAGACAGTTGTG +
Preference number: 5 (lower is better)
Translates to: KRESTSTSLQVITQIRHRFGIST*AVETVV
Trigger: CACAACTGTCTCTACTGCCAAGGTGCTAATGCCGAA...TCTATGCCTTATTTGAGTTATCACTTGGAGGGAGGTGGAAGTTGACTCTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397283.6
CDS-3UTR CAA 90 bp CATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCTCCAAGTGATAACTCCTCCATGGATGAGTaGAGCAGCATGTTCCCTTGT +
Preference number: 5 (lower is better)
Translates to: HYSTVKKRVNFHLPPSDNSSMDE*SSMFPC
Trigger: ACAAGGGAACATGCTGCTCAACTCATCCATGGAGGA...GTTATCACTTGGAGGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR CAA 90 bp AAAAGAGAGTCAACTTCCACCTCCCTCCAAGTGATAACTCAAATAAGGCATAGATCCTCCATGGATGAGTaGAGCAGCATGTTCCCTTGT +
Preference number: 5 (lower is better)
Translates to: KRESTSTSLQVITQIRHRSSMDE*SSMFPC
Trigger: ACAAGGGAACATGCTGCTCAACTCATCCATGGAGGA...TCTATGCCTTATTTGAGTTATCACTTGGAGGGAGGTGGAAGTTGACTCTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR CAA 90 bp TCCTCATCATGTTTAGAATGTAACATGTCAGCTTGGCTAGGTTTTCGAAATCCCTCTTCTTCCCTAAGGTaGGCTGCTCATCAGGTGTCA +
Preference number: 5 (lower is better)
Translates to: SSSCLECNMSAWLGFRNPSSSLR*AAHQVS
Trigger: TGACACCTGATGAGCAGCCAACCTTAGGGAAGAAGA...GGGATTTCGAAAACCTAGCCAAGCTGACATGTTACATTCTAAACATGATGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409395.3
CDS-3UTR CAA 90 bp CATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCTCCAAGTGATAACTCTTCTTCCCTAAGGTaGGCTGCTCATCAGGTGTCA +
Preference number: 5 (lower is better)
Translates to: HYSTVKKRVNFHLPPSDNSSSLR*AAHQVS
Trigger: TGACACCTGATGAGCAGCCAACCTTAGGGAAGAAGA...GTTATCACTTGGAGGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR CAA 90 bp AGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCTCTTCTTCCCTAAGGTaGGCTGCTCATCAGGTGTCA +
Preference number: 5 (lower is better)
Translates to: RVISTLFYSEKESQLPPPSSSLR*AAHQVS
Trigger: TGACACCTGATGAGCAGCCAACCTTAGGGAAGAAGA...GGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR CAA 90 bp CTAGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCTGTCATGATGTGCGGTaGAATCCGATCTGGAGAGAG +
Preference number: 5 (lower is better)
Translates to: LGLFPHYSTVKKRVNFHLCHDVR*NPIWRE
Trigger: CTCTCTCCAGATCGGATTCAACCGCACATCATGACA...GAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR CAA 90 bp TCCTTCTGTCTTCTTATTTCCTGGTTACTGCCACTCAGAGGAATCTTCTCCCACATCAGCACTAGTTTCTaGGAGAGAAAGATCTGTGAT +
Preference number: 5 (lower is better)
Translates to: SFCLLISWLLPLRGIFSHISTSF*ERKICD
Trigger: ATCACAGATCTTTCTCTCCAAGAAACTAGTGCTGAT...GTGGGAGAAGATTCCTCTGAGTGGCAGTAACCAGGAAATAAGAAGACAGAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409216.5
ENST00000409395.3
CDS-3UTR CAA 90 bp TGGAATAAGCATTTCTGGAGATATCACTCTTCTTCCCTAAGGTTGGCTGCTCATCAGCCTTTTAGCATTTaGTCCTCCATGGATGAGTTG +
Preference number: 5 (lower is better)
Translates to: WNKHFWRYHSSSLRLAAHQPFSI*SSMDEL
Trigger: CAACTCATCCATGGAGGACAAAATGCTAAAAGGCTG...ATGAGCAGCCAACCTTAGGGAAGAAGAGTGATATCTCCAGAAATGCTTATTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409395.3
CDS-3UTR CAA 90 bp TCCTTCTGTCTTCTTATTTCCTGGTTACTGCCACTCAGAGGAATCTTCTCCCACTTTAGTGATTGTTTGTaGACCGTTTTCAGGTGGTTT +
Preference number: 5 (lower is better)
Translates to: SFCLLISWLLPLRGIFSHFSDCL*TVFRWF
Trigger: AAACCACCTGAAAACGGTCAACAAACAATCACTAAA...GTGGGAGAAGATTCCTCTGAGTGGCAGTAACCAGGAAATAAGAAGACAGAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409216.5
ENST00000409395.3
CDS-3UTR CAA 90 bp TCTTATTTCCTGGTTACTGCCACTCAGAGGAATCTTCTCCCACTGATGCCACAATTTAGTGATTGTTTGTaGACCGTTTTCAGGTGGTTT +
Preference number: 5 (lower is better)
Translates to: SYFLVTATQRNLLPLMPQFSDCL*TVFRWF
Trigger: AAACCACCTGAAAACGGTCAACAAACAATCACTAAA...TTGTGGCATCAGTGGGAGAAGATTCCTCTGAGTGGCAGTAACCAGGAAATAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409925.1
CDS-3UTR CAA 90 bp TATTTCCTGGTTACTGCCACTCAGAGGAATCTTCTCCCACTGATGCCACAAAATGATTTTAGTGATTGTTaGTTGACCGTTTTCAGGTGG +
Preference number: 5 (lower is better)
Translates to: YFLVTATQRNLLPLMPQNDFSDC*LTVFRW
Trigger: CCACCTGAAAACGGTCAACAAACAATCACTAAAATC...ATTTTGTGGCATCAGTGGGAGAAGATTCCTCTGAGTGGCAGTAACCAGGAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409925.1
CDS-3UTR CAA 90 bp TTGAATCACAAAAGCTCAAGTAAACCTTCATGTGTAGCTACCAGTTTGTGTTCTTCCTCCATGGATGAGTaGAGCAGCATGTTCCCTTGT +
Preference number: 5 (lower is better)
Translates to: LNHKSSSKPSCVATSLCSSSMDE*SSMFPC
Trigger: ACAAGGGAACATGCTGCTCAACTCATCCATGGAGGA...AGAACACAAACTGGTAGCTACACATGAAGGTTTACTTGAGCTTTTGTGATTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
CDS-3UTR CAA 90 bp CCTTCTGTCTTCTTATTTCCTGGTTACTGCCACTCAGAGGAATCTTCTCCCACTTTTTCTTTTAGCATTTaGTCCTCCATGGATGAGTTG +
Preference number: 5 (lower is better)
Translates to: PSVFLFPGYCHSEESSPTFSFSI*SSMDEL
Trigger: CAACTCATCCATGGAGGACAAAATGCTAAAAGAAAA...AGTGGGAGAAGATTCCTCTGAGTGGCAGTAACCAGGAAATAAGAAGACAGAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409216.5
CDS-3UTR CAA 90 bp TCTTATTTCCTGGTTACTGCCACTCAGAGGAATCTTCTCCCACTGATGCCACAATTTTCTTTTAGCATTTaGTCCTCCATGGATGAGTTG +
Preference number: 5 (lower is better)
Translates to: SYFLVTATQRNLLPLMPQFSFSI*SSMDEL
Trigger: CAACTCATCCATGGAGGACAAAATGCTAAAAGAAAA...TTGTGGCATCAGTGGGAGAAGATTCCTCTGAGTGGCAGTAACCAGGAAATAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409925.1
CDS-3UTR CAA 90 bp TCCTCATCATGTTTAGAATGTAACATGTCAGCTTGGCTAGGTTTTCGAAATCCCTCATCTTCTTCCTCTTaGAGAGGCTGCTCAGTAATC +
Preference number: 5 (lower is better)
Translates to: SSSCLECNMSAWLGFRNPSSSSS*RGCSVI
Trigger: GATTACTGAGCAGCCTCTCAAAGAGGAAGAAGATGA...GGGATTTCGAAAACCTAGCCAAGCTGACATGTTACATTCTAAACATGATGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409395.3
CDS-3UTR CAA 90 bp CATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCTCCAAGTGATAACTCATCTTCTTCCTCTTaGAGAGGCTGCTCAGTAATC +
Preference number: 5 (lower is better)
Translates to: HYSTVKKRVNFHLPPSDNSSSSS*RGCSVI
Trigger: GATTACTGAGCAGCCTCTCAAAGAGGAAGAAGATGA...GTTATCACTTGGAGGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR CAA 90 bp TCATCTTCTTCCTCTTTGAGAGGCTGCTCAGTAATCCTCTCCTTCTGTCTTCTTATAAGATACCTGCTCTaGCCTTCAAGTCCTATAGTT +
Preference number: 5 (lower is better)
Translates to: SSSSSLRGCSVILSFCLLIRYLL*PSSPIV
Trigger: AACTATAGGACTTGAAGGCAAGAGCAGGTATCTTAT...AAGAAGACAGAAGGAGAGGATTACTGAGCAGCCTCTCAAAGAGGAAGAAGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409216.5
ENST00000409395.3
CDS-3UTR CAA 90 bp TATCTAGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACTGTCATGATGTGCGGTaGAATCCGATCTGGAGAGAG +
Preference number: 5 (lower is better)
Translates to: YLGLFPHYSTVKKRVNFHCHDVR*NPIWRE
Trigger: CTCTCTCCAGATCGGATTCAACCGCACATCATGACA...GTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCTAGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR CAA 90 bp CTAGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCTCATCTTCTTCCTCTTaGAGAGGCTGCTCAGTAATC +
Preference number: 5 (lower is better)
Translates to: LGLFPHYSTVKKRVNFHLSSSSS*RGCSVI
Trigger: GATTACTGAGCAGCCTCTCAAAGAGGAAGAAGATGA...GAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR CAA 90 bp TATCTAGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACTCTTCTTCCCTAAGGTaGGCTGCTCATCAGGTGTCA +
Preference number: 5 (lower is better)
Translates to: YLGLFPHYSTVKKRVNFHSSSLR*AAHQVS
Trigger: TGACACCTGATGAGCAGCCAACCTTAGGGAAGAAGA...GTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCTAGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR CAA 90 bp GGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCTTTCATAGTTCATTCATaGTCTGGTGAGAGCACAGAG +
Preference number: 5 (lower is better)
Translates to: GLFPHYSTVKKRVNFHLPFIVHS*SGESTE
Trigger: CTCTGTGCTCTCACCAGACAATGAATGAACTATGAA...AGGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
CDS-3UTR CAA 90 bp AAAAGAGAGTCAACTTCCACCTCCCTCCAAGTGATAACTCAAATAAGGCATAGAGATTTTAGTGATTGTTaGTTGACCGTTTTCAGGTGG +
Preference number: 5 (lower is better)
Translates to: KRESTSTSLQVITQIRHRDFSDC*LTVFRW
Trigger: CCACCTGAAAACGGTCAACAAACAATCACTAAAATC...TCTATGCCTTATTTGAGTTATCACTTGGAGGGAGGTGGAAGTTGACTCTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR CAA 90 bp AGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCGATTTTAGTGATTGTTaGTTGACCGTTTTCAGGTGG +
Preference number: 5 (lower is better)
Translates to: RVISTLFYSEKESQLPPPDFSDC*LTVFRW
Trigger: CCACCTGAAAACGGTCAACAAACAATCACTAAAATC...GGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR CAA 90 bp AGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCATTTTGGAAGGCTTATaGCCAGAGTCTGCAAAATCA +
Preference number: 5 (lower is better)
Translates to: RVISTLFYSEKESQLPPPILEGL*PESAKS
Trigger: TGATTTTGCAGACTCTGGCAATAAGCCTTCCAAAAT...GGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
CDS-3UTR CAA 90 bp GGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCTATAAGATACCTGCTCTaGCCTTCAAGTCCTATAGTT +
Preference number: 5 (lower is better)
Translates to: GLFPHYSTVKKRVNFHLPIRYLL*PSSPIV
Trigger: AACTATAGGACTTGAAGGCAAGAGCAGGTATCTTAT...AGGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR CAA 90 bp AAAAGAGAGTCAACTTCCACCTCCCTCCAAGTGATAACTCAAATAAGGCATAGAATAAGATACCTGCTCTaGCCTTCAAGTCCTATAGTT +
Preference number: 5 (lower is better)
Translates to: KRESTSTSLQVITQIRHRIRYLL*PSSPIV
Trigger: AACTATAGGACTTGAAGGCAAGAGCAGGTATCTTAT...TCTATGCCTTATTTGAGTTATCACTTGGAGGGAGGTGGAAGTTGACTCTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR CAA 90 bp AGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCTTTAGTGATTGTTTGTaGACCGTTTTCAGGTGGTTT +
Preference number: 5 (lower is better)
Translates to: RVISTLFYSEKESQLPPPFSDCL*TVFRWF
Trigger: AAACCACCTGAAAACGGTCAACAAACAATCACTAAA...GGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR CAA 90 bp GGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCTTTTAGTGATTGTTTGTaGACCGTTTTCAGGTGGTTT +
Preference number: 5 (lower is better)
Translates to: GLFPHYSTVKKRVNFHLPFSDCL*TVFRWF
Trigger: AAACCACCTGAAAACGGTCAACAAACAATCACTAAA...AGGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR CAA 90 bp AAAAGAGAGTCAACTTCCACCTCCCTCCAAGTGATAACTCAAATAAGGCATAGATTTAGTGATTGTTTGTaGACCGTTTTCAGGTGGTTT +
Preference number: 5 (lower is better)
Translates to: KRESTSTSLQVITQIRHRFSDCL*TVFRWF
Trigger: AAACCACCTGAAAACGGTCAACAAACAATCACTAAA...TCTATGCCTTATTTGAGTTATCACTTGGAGGGAGGTGGAAGTTGACTCTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR CAA 90 bp CTAGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCGATTTTAGTGATTGTTaGTTGACCGTTTTCAGGTGG +
Preference number: 5 (lower is better)
Translates to: LGLFPHYSTVKKRVNFHLDFSDC*LTVFRW
Trigger: CCACCTGAAAACGGTCAACAAACAATCACTAAAATC...GAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR CAA 90 bp CATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCCCTCCAAGTGATAACTTTTCTTTTAGCATTTaGTCCTCCATGGATGAGTTG +
Preference number: 5 (lower is better)
Translates to: HYSTVKKRVNFHLPPSDNFSFSI*SSMDEL
Trigger: CAACTCATCCATGGAGGACAAAATGCTAAAAGAAAA...GTTATCACTTGGAGGGAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
CDS-3UTR CAA 90 bp TATCTAGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACTCATCTTCTTCCTCTTaGAGAGGCTGCTCAGTAATC +
Preference number: 5 (lower is better)
Translates to: YLGLFPHYSTVKKRVNFHSSSSS*RGCSVI
Trigger: GATTACTGAGCAGCCTCTCAAAGAGGAAGAAGATGA...GTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCTAGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR CAA 90 bp CTAGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCTTTAGTGATTGTTTGTaGACCGTTTTCAGGTGGTTT +
Preference number: 5 (lower is better)
Translates to: LGLFPHYSTVKKRVNFHLFSDCL*TVFRWF
Trigger: AAACCACCTGAAAACGGTCAACAAACAATCACTAAA...GAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR CAA 90 bp CTAGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACCTCTTTTCTTTTAGCATTTaGTCCTCCATGGATGAGTTG +
Preference number: 5 (lower is better)
Translates to: LGLFPHYSTVKKRVNFHLFSFSI*SSMDEL
Trigger: CAACTCATCCATGGAGGACAAAATGCTAAAAGAAAA...GAGGTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
CDS TCA 90 bp TCATCAGCACTAGTTTCTTGGAGAGAAAGATCTGTGATAGCCTTATaGACAATAAAGAGTTTCTCTTCTTTTAGCATTTTGTCCTCCATG +
Preference number: 5 (lower is better)
Translates to: SSALVSWRERSVIAL*TIKSFSSFSILSSM
Trigger: CATGGAGGACAAAATGCTAAAAGAAGAGAAACTCTTTATTGTTCATAAGGCTATCACAGATCTTTCTCTCCAAGAAACTAGTGCTGATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419116.2
CDS-3UTR CAA 90 bp TATCTAGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACATCAGCACTAGTTTCTaGGAGAGAAAGATCTGTGAT +
Preference number: 5 (lower is better)
Translates to: YLGLFPHYSTVKKRVNFHISTSF*ERKICD
Trigger: ATCACAGATCTTTCTCTCCAAGAAACTAGTGCTGAT...GTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCTAGATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397283.6
ENST00000409395.3
ENST00000410096.6
CDS-3UTR CAA 90 bp TATCTAGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACATTTTGGAAGGCTTATaGCCAGAGTCTGCAAAATCA +
Preference number: 5 (lower is better)
Translates to: YLGLFPHYSTVKKRVNFHILEGL*PESAKS
Trigger: TGATTTTGCAGACTCTGGCAATAAGCCTTCCAAAAT...GTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCTAGATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397283.6
ENST00000410096.6
CDS-3UTR CAA 90 bp TATCTAGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACATAAGATACCTGCTCTaGCCTTCAAGTCCTATAGTT +
Preference number: 5 (lower is better)
Translates to: YLGLFPHYSTVKKRVNFHIRYLL*PSSPIV
Trigger: AACTATAGGACTTGAAGGCAAGAGCAGGTATCTTAT...GTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCTAGATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409395.3
ENST00000410096.6
ENST00000420719.6
CDS-3UTR CAA 90 bp TATCTAGGGTTATTTCCACATTATTCTACAGTGAAAAAGAGAGTCAACTTCCACGTTTCTTTTAGCATTTaGTCCTCCATGGATGAGTTG +
Preference number: 5 (lower is better)
Translates to: YLGLFPHYSTVKKRVNFHVSFSI*SSMDEL
Trigger: CAACTCATCCATGGAGGACAAAATGCTAAAAGAAAC...GTGGAAGTTGACTCTCTTTTTCACTGTAGAATAATGTGGAAATAACCCTAGATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420719.6
CDS CAA 90 bp CAGATGAAGCTAAGCGCCATCCCTGGCCTGTGTGCAGATGTTTCCTaGGACCAGAGATCCCACAGGGGTTCGGCATTAGCACCTTGGCAG +
Preference number: 6 (lower is better)
Translates to: QMKLSAIPGLCADVS*DQRSHRGSALAPWQ
Trigger: CTGCCAAGGTGCTAATGCCGAACCCCTGTGGGATCTCTGGTCCAAGGAAACATCTGCACACAGGCCAGGGATGGCGCTTAGCTTCATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397283.6
CDS GCA 72 bp AGCACAGATGAAGCTAAGCGCCATCCCTGGCCTGTGTaGAGATGTTTCCTTGGACCAGAGATCCCACAGGGG +
Preference number: 6 (lower is better)
Translates to: STDEAKRHPWPV*RCFLGPEIPQG
Trigger: CCCCTGTGGGATCTCTGGTCCAAGGAAACATCTGCACACAGGCCAGGGATGGCGCTTAGCTTCATCTGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397283.6
CDS CAA 72 bp CTAAGCGCCATCCCTGGCCTGTGTGCAGATGTTTCCTaGGACCAGAGATCCCACAGGGGTTCGGCATTAGCA +
Preference number: 6 (lower is better)
Translates to: LSAIPGLCADVS*DQRSHRGSALA
Trigger: TGCTAATGCCGAACCCCTGTGGGATCTCTGGTCCAAGGAAACATCTGCACACAGGCCAGGGATGGCGCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397283.6
CDS CCA 72 bp GAGTGCACCTTCCAGACTGGGTTCTACCCTGTAGTGTaGCAGGGGGCTGTCCACATCAGTCAATTCCTCACT +
Preference number: 6 (lower is better)
Translates to: ECTFQTGFYPVV*QGAVHISQFLT
Trigger: AGTGAGGAATTGACTGATGTGGACAGCCCCCTGCCACACTACAGGGTAGAACCCAGTCTGGAAGGTGCACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000397283.6
ENST00000409216.5
ENST00000409395.3
ENST00000409925.1
ENST00000410096.6
ENST00000411762.5
ENST00000419116.2
ENST00000420317.5
ENST00000420719.6
CDS CCA 72 bp AGAGTTTGCAGCACAGATGAAGCTAAGCGCCATCCCTaGCCTGTGTGCAGATGTTTCCTTGGACCAGAGATC +
Preference number: 6 (lower is better)
Translates to: RVCSTDEAKRHP*PVCRCFLGPEI
Trigger: GATCTCTGGTCCAAGGAAACATCTGCACACAGGCCAGGGATGGCGCTTAGCTTCATCTGTGCTGCAAACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397283.6
CDS CAA 90 bp CTCAGCCTGGGTAAATGTAGCCGGAACATCTGTCATGATGTGCGGTaGAATCCGATCTGGAGAGAGAGTCTTCATAACAGTCTTCTGAGG +
Preference number: 6 (lower is better)
Translates to: LSLGKCSRNICHDVR*NPIWRESLHNSLLR
Trigger: CCTCAGAAGACTGTTATGAAGACTCTCTCTCCAGATCGGATTCAACCGCACATCATGACAGATGTTCCGGCTACATTTACCCAGGCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397283.6
CDS CAA 90 bp CTCAGCCTGGGTAAATGTAGCCGGAACATCTGTCATGATGTGCGGTaGAATCCGATCTGGAGAGAGAGCTTTAAAAGTGTGTCTAGGGCT +
Preference number: 6 (lower is better)
Translates to: LSLGKCSRNICHDVR*NPIWRESFKSVSRA
Trigger: AGCCCTAGACACACTTTTAAAGCTCTCTCTCCAGATCGGATTCAACCGCACATCATGACAGATGTTCCGGCTACATTTACCCAGGCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411762.5
CDS CCA 72 bp CCGTTTTCAGGTGGTTTATCCCCATTACACTCAGCCTaGGTAAATGTAGCCGGAACATCTGTCATGATGTGC +
Preference number: 6 (lower is better)
Translates to: PFSGGLSPLHSA*VNVAGTSVMMC
Trigger: GCACATCATGACAGATGTTCCGGCTACATTTACCCAGGCTGAGTGTAATGGGGATAAACCACCTGAAAACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000397283.6
ENST00000409216.5
ENST00000409395.3
ENST00000409925.1
ENST00000410096.6
ENST00000411762.5
ENST00000419116.2
ENST00000420317.5
ENST00000420719.6
CDS TCA 72 bp GTAAATGTAGCCGGAACATCTGTCATGATGTGCGGTTaGATCCGATCTGGAGAGAGAGCTTTAGGGAAACTG +
Preference number: 6 (lower is better)
Translates to: VNVAGTSVMMCG*IRSGERALGKL
Trigger: CAGTTTCCCTAAAGCTCTCTCTCCAGATCGGATTCAACCGCACATCATGACAGATGTTCCGGCTACATTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409216.5
ENST00000409395.3
ENST00000410096.6
ENST00000419116.2
ENST00000420719.6
CDS CAA 72 bp GGTAAATGTAGCCGGAACATCTGTCATGATGTGCGGTaGAATCCGATCTGGAGAGAGAGCTTTAGGGAAACT +
Preference number: 6 (lower is better)
Translates to: GKCSRNICHDVR*NPIWRESFRET
Trigger: AGTTTCCCTAAAGCTCTCTCTCCAGATCGGATTCAACCGCACATCATGACAGATGTTCCGGCTACATTTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409216.5
ENST00000409395.3
ENST00000410096.6
ENST00000419116.2
ENST00000420719.6
CDS CAA 72 bp CCCATTCAGGTCTATATCAGGGACAACACCTCACTCTaGTATAATCCCCTCTCCCTTGTCCTTGGAAGACAT +
Preference number: 6 (lower is better)
Translates to: PIQVYIRDNTSL*YNPLSLVLGRH
Trigger: ATGTCTTCCAAGGACAAGGGAGAGGGGATTATACAAGAGTGAGGTGTTGTCCCTGATATAGACCTGAATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411762.5
CDS CAA 72 bp GGTCACAGCTGTCAAATAGACCAGCCTTTTAGCATTTaGTCCTCCATGGATGAGTTGAGCAGCATGTTCCCT +
Preference number: 6 (lower is better)
Translates to: GHSCQIDQPFSI*SSMDELSSMFP
Trigger: AGGGAACATGCTGCTCAACTCATCCATGGAGGACAAAATGCTAAAAGGCTGGTCTATTTGACAGCTGTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409395.3
CDS TCA 72 bp GTAAATGTAGCCGGAACATCTGTCATGATGTGCGGTTaGATCCGATCTGGAGAGAGAGTCTTCATAACAGTC +
Preference number: 6 (lower is better)
Translates to: VNVAGTSVMMCG*IRSGERVFITV
Trigger: GACTGTTATGAAGACTCTCTCTCCAGATCGGATTCAACCGCACATCATGACAGATGTTCCGGCTACATTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397283.6
CDS CAA 72 bp GGTAAATGTAGCCGGAACATCTGTCATGATGTGCGGTaGAATCCGATCTGGAGAGAGAGTCTTCATAACAGT +
Preference number: 6 (lower is better)
Translates to: GKCSRNICHDVR*NPIWRESLHNS
Trigger: ACTGTTATGAAGACTCTCTCTCCAGATCGGATTCAACCGCACATCATGACAGATGTTCCGGCTACATTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397283.6
CDS CAA 90 bp GTTGTCTGGGGTCACAGCTGTCAAATAGACCAGCCTTTTAGCATTTaGTCCTCCATGGATGAGTTGAGCAGCATGTTCCCTTGTAATTTT +
Preference number: 6 (lower is better)
Translates to: VVWGHSCQIDQPFSI*SSMDELSSMFPCNF
Trigger: AAAATTACAAGGGAACATGCTGCTCAACTCATCCATGGAGGACAAAATGCTAAAAGGCTGGTCTATTTGACAGCTGTGACCCCAGACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409395.3
CDS TCA 72 bp GTAAATGTAGCCGGAACATCTGTCATGATGTGCGGTTaGATCCGATCTGGAGAGAGAGCTTTAAAAGTGTGT +
Preference number: 6 (lower is better)
Translates to: VNVAGTSVMMCG*IRSGERALKVC
Trigger: ACACACTTTTAAAGCTCTCTCTCCAGATCGGATTCAACCGCACATCATGACAGATGTTCCGGCTACATTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411762.5
CDS CAA 72 bp GTCTTCTCTGAATGTCATTTCATCAGCACTAGTTTCTaGGAGAGAAAGATCTGTGATAGCCTTATGAACAAT +
Preference number: 6 (lower is better)
Translates to: VFSECHFISTSF*ERKICDSLMNN
Trigger: ATTGTTCATAAGGCTATCACAGATCTTTCTCTCCAAGAAACTAGTGCTGATGAAATGACATTCAGAGAAGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409216.5
ENST00000409925.1
CDS TCA 72 bp CTAGTTTCTTGGAGAGAAAGATCTGTGATAGCCTTATaGACAATAAAGAGTTTCTCTTCTGGGTTTTCTTTT +
Preference number: 6 (lower is better)
Translates to: LVSWRERSVIAL*TIKSFSSGFSF
Trigger: AAAAGAAAACCCAGAAGAGAAACTCTTTATTGTTCATAAGGCTATCACAGATCTTTCTCTCCAAGAAACTAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397283.6
ENST00000409216.5
ENST00000409925.1
ENST00000410096.6
ENST00000411762.5
ENST00000420317.5