RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ERMAP (Homo sapiens)

Ensembl gene IDs: ENSG00000164010

Ensembl transcript IDs: ENST00000328249.3, ENST00000372514.7, ENST00000372517.8, ENST00000470938.1, ENST00000487556.6, ENST00000642150.1, ENST00000643061.1, ENST00000645239.1, ENST00000647120.1

Found 343 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATAGCCTTTGGACAGGACCATCAGCTTTTTCCTTGCCTTCGGACTTaGATTAAACATCATCTCTTCCTTGGCGTCAAGCCTGCTGCCATC +
Preference number: 1 (lower is better)
Translates to: IAFGQDHQLFPCLRT*IKHHLFLGVKPAAI
Trigger: GATGGCAGCAGGCTTGACGCCAAGGAAGAGATGATGTTTAATTCAAGTCCGAAGGCAAGGAAAAAGCTGATGGTCCTGTCCAAAGGCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR CCA 90 bp CTTGAGGGCAGGATGAGGCAGAGAAAGTGTCTTCTAAATAACCCCTaGAGTAGCGAACTCTTTTCCCTGAACCTGTGCTGTATCTTGGTA +
Preference number: 1 (lower is better)
Translates to: LEGRMRQRKCLLNNP*SSELFSLNLCCILV
Trigger: TACCAAGATACAGCACAGGTTCAGGGAAAAGAGTTCGCTACTCCAGGGGTTATTTAGAAGACACTTTCTCTGCCTCATCCTGCCCTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR TCA 90 bp TGTATCTTGGTAACACATATTCAACATCTCCACCTGCACCTAAACTaGTTGTTTGGTTTCCAGGAATCCTCCCTCCAGGTCACTGGGAGC +
Preference number: 1 (lower is better)
Translates to: CILVTHIQHLHLHLN*LFGFQESSLQVTGS
Trigger: GCTCCCAGTGACCTGGAGGGAGGATTCCTGGAAACCAAACAATCAGTTTAGGTGCAGGTGGAGATGTTGAATATGTGTTACCAAGATACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR CCA 90 bp GGTAACACATATTCAACATCTCCACCTGCACCTAAACTGATTGTTTaGTTTCCAGGAATCCTCCCTCCAGGTCACTGGGAGCTTCAATTC +
Preference number: 1 (lower is better)
Translates to: GNTYSTSPPAPKLIV*FPGILPPGHWELQF
Trigger: GAATTGAAGCTCCCAGTGACCTGGAGGGAGGATTCCTGGAAACCAAACAATCAGTTTAGGTGCAGGTGGAGATGTTGAATATGTGTTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR CCA 90 bp CCTAAACTGATTGTTTGGTTTCCAGGAATCCTCCCTCCAGGTCACTaGGAGCTTCAATTCCTTAGAAGAAAGGTAAGCTTCAGAACTGAG +
Preference number: 1 (lower is better)
Translates to: PKLIVWFPGILPPGH*ELQFLRRKVSFRTE
Trigger: CTCAGTTCTGAAGCTTACCTTTCTTCTAAGGAATTGAAGCTCCCAGTGACCTGGAGGGAGGATTCCTGGAAACCAAACAATCAGTTTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR TCA 90 bp ACCAATATCTCCATGGTTAGGCCAGATCGCATATATGATGTGACTTaGAAGCGACGAGGCTTCTGCAATACACACCCAAAAATCAAGGTC +
Preference number: 1 (lower is better)
Translates to: TNISMVRPDRIYDVT*KRRGFCNTHPKIKV
Trigger: GACCTTGATTTTTGGGTGTGTATTGCAGAAGCCTCGTCGCTTTCAAGTCACATCATATATGCGATCTGGCCTAACCATGGAGATATTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR GCA 90 bp ACTGTGATAGTTAATCTTATGTATCCACTTAACTGGGTCACAAGATaGCCAGCTATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGG +
Preference number: 1 (lower is better)
Translates to: TVIVNLMYPLNWVTR*PAIWSNIILSVPVR
Trigger: CCTCACAGGAACACTCAGAATAATGTTTGACCAAATAGCTGGGCATCTTGTGACCCAGTTAAGTGGATACATAAGATTAACTATCACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR CCA 90 bp AATCTTATGTATCCACTTAACTGGGTCACAAGATGCCCAGCTATTTaGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAAT +
Preference number: 1 (lower is better)
Translates to: NLMYPLNWVTRCPAI*SNIILSVPVRVFLN
Trigger: ATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAATAGCTGGGCATCTTGTGACCCAGTTAAGTGGATACATAAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR-3UTR TCA 90 bp AGACTGAGTAATGCAGACTGTCCTCCCAAATGTGGGCGGGCCTTGCTGAATCAGGGGGCCATAACTTCTTaGCTAAAGCTTGAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: RLSNADCPPKCGRALLNQGAITS*LKLEGR
Trigger: CCTGCCCTCAAGCTTTAGTCAAGAAGTTATGGCCCC...CTGATTCAGCAAGGCCCGCCCACATTTGGGAGGACAGTCTGCATTACTCAGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR-3UTR TCA 90 bp CGAACTCTTTTCCCTGAACCTGTGCTGTATCTTGGTAACACATATTCAACATCTGTTGGGCCAGGCGACTaGAGTCCAGGGTGCTGGGCT +
Preference number: 2 (lower is better)
Translates to: RTLFPEPVLYLGNTYSTSVGPGD*SPGCWA
Trigger: AGCCCAGCACCCTGGACTTCAGTCGCCTGGCCCAAC...AGATGTTGAATATGTGTTACCAAGATACAGCACAGGTTCAGGGAAAAGAGTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR-3UTR TCA 90 bp CATCAGCTCTCATGGGACTCCATCTTGCTGACTTATCCTGCAGATCTTGGGATTGGGGCCATAACTTCTTaGCTAAAGCTTGAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: HQLSWDSILLTYPADLGIGAITS*LKLEGR
Trigger: CCTGCCCTCAAGCTTTAGTCAAGAAGTTATGGCCCC...AATCCCAAGATCTGCAGGATAAGTCAGCAAGATGGAGTCCCATGAGAGCTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR-3UTR CCA 90 bp AGACTGAGTAATGCAGACTGTCCTCCCAAATGTGGGCGGGCCTTGCTGAATCAGGCCACTTTTTCTAGCTaGACCTCTCTGAATCTCAGA +
Preference number: 2 (lower is better)
Translates to: RLSNADCPPKCGRALLNQATFSS*TSLNLR
Trigger: TCTGAGATTCAGAGAGGTCCAGCTAGAAAAAGTGGC...CTGATTCAGCAAGGCCCGCCCACATTTGGGAGGACAGTCTGCATTACTCAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR-3UTR TCA 90 bp ATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATGACATTGTTGGGCCAGGCGACTaGAGTCCAGGGTGCTGGGCT +
Preference number: 2 (lower is better)
Translates to: IWSNIILSVPVRVFLNDIVGPGD*SPGCWA
Trigger: AGCCCAGCACCCTGGACTTCAGTCGCCTGGCCCAAC...AATGTCATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR-3UTR CCA 90 bp CCAGCTATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATTCCAGGGTGCTGGGCTaGATGGTGATGGGAGCAGGT +
Preference number: 2 (lower is better)
Translates to: PAIWSNIILSVPVRVFLNSRVLG*MVMGAG
Trigger: ACCTGCTCCCATCACCATCCAGCCCAGCACCCTGGA...ATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAATAGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR-3UTR CCA 90 bp AGACTGAGTAATGCAGACTGTCCTCCCAAATGTGGGCGGGCCTTGCTGAATCAGAAAAGGGTCTGGATTTaGGTTAAGGTGAAGAGACGT +
Preference number: 2 (lower is better)
Translates to: RLSNADCPPKCGRALLNQKRVWI*VKVKRR
Trigger: ACGTCTCTTCACCTTAACCCAAATCCAGACCCTTTT...CTGATTCAGCAAGGCCCGCCCACATTTGGGAGGACAGTCTGCATTACTCAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR-3UTR CCA 90 bp CATCAGCTCTCATGGGACTCCATCTTGCTGACTTATCCTGCAGATCTTGGGATTCTCCCTCCAGGTCACTaGGAGCTTCAATTCCTTAGA +
Preference number: 2 (lower is better)
Translates to: HQLSWDSILLTYPADLGILPPGH*ELQFLR
Trigger: TCTAAGGAATTGAAGCTCCCAGTGACCTGGAGGGAG...AATCCCAAGATCTGCAGGATAAGTCAGCAAGATGGAGTCCCATGAGAGCTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR-3UTR TCA 90 bp ACTGTGATAGTTAATCTTATGTATCCACTTAACTGGGTCACAAGATGCCCAGCTAACAGACTGAGCCTCTaGAGGTCTGGGCCAAGGTCA +
Preference number: 2 (lower is better)
Translates to: TVIVNLMYPLNWVTRCPANRLSL*RSGPRS
Trigger: TGACCTTGGCCCAGACCTTCAGAGGCTCAGTCTGTT...AGCTGGGCATCTTGTGACCCAGTTAAGTGGATACATAAGATTAACTATCACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR-3UTR GCA 90 bp CATCAGCTCTCATGGGACTCCATCTTGCTGACTTATCCTGCAGATCTTGGGATTAAGCGACGAGGCTTCTaGAATACACACCCAAAAATC +
Preference number: 2 (lower is better)
Translates to: HQLSWDSILLTYPADLGIKRRGF*NTHPKI
Trigger: GATTTTTGGGTGTGTATTGCAGAAGCCTCGTCGCTT...AATCCCAAGATCTGCAGGATAAGTCAGCAAGATGGAGTCCCATGAGAGCTGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR-3UTR CCA 90 bp ATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATGACATTTCCAGGGTGCTGGGCTaGATGGTGATGGGAGCAGGT +
Preference number: 2 (lower is better)
Translates to: IWSNIILSVPVRVFLNDISRVLG*MVMGAG
Trigger: ACCTGCTCCCATCACCATCCAGCCCAGCACCCTGGA...AATGTCATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR-3UTR CCA 90 bp TCTCCACCTGCACCTAAACTGATTGTTTGGTTTCCAGGAATCCTCCCTCCAGGTAAAAGGGTCTGGATTTaGGTTAAGGTGAAGAGACGT +
Preference number: 2 (lower is better)
Translates to: SPPAPKLIVWFPGILPPGKRVWI*VKVKRR
Trigger: ACGTCTCTTCACCTTAACCCAAATCCAGACCCTTTT...ACCTGGAGGGAGGATTCCTGGAAACCAAACAATCAGTTTAGGTGCAGGTGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR-3UTR CCA 90 bp TCTCCACCTGCACCTAAACTGATTGTTTGGTTTCCAGGAATCCTCCCTCCAGGTAACCACAAAAGGGTCTaGATTTGGGTTAAGGTGAAG +
Preference number: 2 (lower is better)
Translates to: SPPAPKLIVWFPGILPPGNHKRV*IWVKVK
Trigger: CTTCACCTTAACCCAAATCCAGACCCTTTTGTGGTT...ACCTGGAGGGAGGATTCCTGGAAACCAAACAATCAGTTTAGGTGCAGGTGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR-3UTR CCA 90 bp TCTCCACCTGCACCTAAACTGATTGTTTGGTTTCCAGGAATCCTCCCTCCAGGTTTCAGAACTGAGGCCTaGGAGAAAAGTGGTACAAAT +
Preference number: 2 (lower is better)
Translates to: SPPAPKLIVWFPGILPPGFRTEA*EKSGTN
Trigger: ATTTGTACCACTTTTCTCCCAGGCCTCAGTTCTGAA...ACCTGGAGGGAGGATTCCTGGAAACCAAACAATCAGTTTAGGTGCAGGTGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR-3UTR CCA 90 bp CATCAGCTCTCATGGGACTCCATCTTGCTGACTTATCCTGCAGATCTTGGGATTCCTAAACTGATTGTTTaGTTTCCAGGAATCCTCCCT +
Preference number: 2 (lower is better)
Translates to: HQLSWDSILLTYPADLGIPKLIV*FPGILP
Trigger: AGGGAGGATTCCTGGAAACCAAACAATCAGTTTAGG...AATCCCAAGATCTGCAGGATAAGTCAGCAAGATGGAGTCCCATGAGAGCTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR-3UTR TCA 90 bp ATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATGACATTTGTTTCCCAGCTCCCTaGTGTGCTCCTGGGGCTTTT +
Preference number: 2 (lower is better)
Translates to: IWSNIILSVPVRVFLNDICFPAP*CAPGAF
Trigger: AAAAGCCCCAGGAGCACATCAGGGAGCTGGGAAACA...AATGTCATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR-3UTR TCA 90 bp ATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATGACATTAACAGACTGAGCCTCTaGAGGTCTGGGCCAAGGTCA +
Preference number: 2 (lower is better)
Translates to: IWSNIILSVPVRVFLNDINRLSL*RSGPRS
Trigger: TGACCTTGGCCCAGACCTTCAGAGGCTCAGTCTGTT...AATGTCATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR-3UTR TCA 90 bp CATCAGCTCTCATGGGACTCCATCTTGCTGACTTATCCTGCAGATCTTGGGATTGTTGGCACAACAGATTaGTTCATAAGACAGTCACAA +
Preference number: 2 (lower is better)
Translates to: HQLSWDSILLTYPADLGIVGTTD*FIRQSQ
Trigger: TTGTGACTGTCTTATGAATCAATCTGTTGTGCCAAC...AATCCCAAGATCTGCAGGATAAGTCAGCAAGATGGAGTCCCATGAGAGCTGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR-3UTR TCA 90 bp CAATACACACCCAAAAATCAAGGTCATTATTTCATCCTCACACCTAGTCTACCACTAGCTGGACCTCTCTaGATCTCAGAAAGGGTTGGC +
Preference number: 2 (lower is better)
Translates to: QYTPKNQGHYFILTPSLPLAGPL*ISERVG
Trigger: GCCAACCCTTTCTGAGATTCAGAGAGGTCCAGCTAG...TGGTAGACTAGGTGTGAGGATGAAATAATGACCTTGATTTTTGGGTGTGTATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR-3UTR GCA 90 bp CATCAGCTCTCATGGGACTCCATCTTGCTGACTTATCCTGCAGATCTTGGGATTTTTTCCCTGAACCTGTaGTGTATCTTGGTAACACAT +
Preference number: 2 (lower is better)
Translates to: HQLSWDSILLTYPADLGIFSLNL*CILVTH
Trigger: ATGTGTTACCAAGATACAGCACAGGTTCAGGGAAAA...AATCCCAAGATCTGCAGGATAAGTCAGCAAGATGGAGTCCCATGAGAGCTGATG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR-3UTR CCA 90 bp CATCAGCTCTCATGGGACTCCATCTTGCTGACTTATCCTGCAGATCTTGGGATTAAGCTTCTACGTTGGTaGTTAAAACTGCCACTTTTT +
Preference number: 2 (lower is better)
Translates to: HQLSWDSILLTYPADLGIKLLRW*LKLPLF
Trigger: AAAAAGTGGCAGTTTTAACCACCAACGTAGAAGCTT...AATCCCAAGATCTGCAGGATAAGTCAGCAAGATGGAGTCCCATGAGAGCTGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR-3UTR CCA 90 bp CATCAGCTCTCATGGGACTCCATCTTGCTGACTTATCCTGCAGATCTTGGGATTAAAAAGCTTCTACGTTaGTGGTTAAAACTGCCACTT +
Preference number: 2 (lower is better)
Translates to: HQLSWDSILLTYPADLGIKKLLR*WLKLPL
Trigger: AAGTGGCAGTTTTAACCACCAACGTAGAAGCTTTTT...AATCCCAAGATCTGCAGGATAAGTCAGCAAGATGGAGTCCCATGAGAGCTGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR-3UTR TCA 90 bp ACTGTGATAGTTAATCTTATGTATCCACTTAACTGGGTCACAAGATGCCCAGCTATATATGATGTGACTTaGAAGCGACGAGGCTTCTGC +
Preference number: 2 (lower is better)
Translates to: TVIVNLMYPLNWVTRCPAIYDVT*KRRGFC
Trigger: GCAGAAGCCTCGTCGCTTTCAAGTCACATCATATAT...AGCTGGGCATCTTGTGACCCAGTTAAGTGGATACATAAGATTAACTATCACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR-3UTR TCA 90 bp CCAGCTATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATATCGCATATATGATGTaGCTTGAAAGCGACGAGGCT +
Preference number: 2 (lower is better)
Translates to: PAIWSNIILSVPVRVFLNIAYMM*LESDEA
Trigger: AGCCTCGTCGCTTTCAAGTCACATCATATATGCGAT...ATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAATAGCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR-3UTR CCA 90 bp ATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATGACATTCTCCCTCCAGGTCACTaGGAGCTTCAATTCCTTAGA +
Preference number: 2 (lower is better)
Translates to: IWSNIILSVPVRVFLNDILPPGH*ELQFLR
Trigger: TCTAAGGAATTGAAGCTCCCAGTGACCTGGAGGGAG...AATGTCATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR-3UTR TCA 90 bp ATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATGACATTAGGGCAACATACAGCTaGGTTCTCTGCAACTGTGTT +
Preference number: 2 (lower is better)
Translates to: IWSNIILSVPVRVFLNDIRATYS*VLCNCV
Trigger: AACACAGTTGCAGAGAACTCAGCTGTATGTTGCCCT...AATGTCATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR-3UTR GCA 90 bp ACTGTGATAGTTAATCTTATGTATCCACTTAACTGGGTCACAAGATGCCCAGCTCTTGCTGACTTATCCTaGAGATCTTGGGATTTAACC +
Preference number: 2 (lower is better)
Translates to: TVIVNLMYPLNWVTRCPALADLS*RSWDLT
Trigger: GGTTAAATCCCAAGATCTGCAGGATAAGTCAGCAAG...AGCTGGGCATCTTGTGACCCAGTTAAGTGGATACATAAGATTAACTATCACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR-3UTR GCA 90 bp CCAGCTATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATCTTGCTGACTTATCCTaGAGATCTTGGGATTTAACC +
Preference number: 2 (lower is better)
Translates to: PAIWSNIILSVPVRVFLNLADLS*RSWDLT
Trigger: GGTTAAATCCCAAGATCTGCAGGATAAGTCAGCAAG...ATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAATAGCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR-3UTR CCA 90 bp ACTGTGATAGTTAATCTTATGTATCCACTTAACTGGGTCACAAGATGCCCAGCTCTTCTAAATAACCCCTaGAGTAGCGAACTCTTTTCC +
Preference number: 2 (lower is better)
Translates to: TVIVNLMYPLNWVTRCPALLNNP*SSELFS
Trigger: GGAAAAGAGTTCGCTACTCCAGGGGTTATTTAGAAG...AGCTGGGCATCTTGTGACCCAGTTAAGTGGATACATAAGATTAACTATCACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR-3UTR CCA 90 bp CAATACACACCCAAAAATCAAGGTCATTATTTCATCCTCACACCTAGTCTACCACCTAAACTGATTGTTTaGTTTCCAGGAATCCTCCCT +
Preference number: 2 (lower is better)
Translates to: QYTPKNQGHYFILTPSLPPKLIV*FPGILP
Trigger: AGGGAGGATTCCTGGAAACCAAACAATCAGTTTAGG...TGGTAGACTAGGTGTGAGGATGAAATAATGACCTTGATTTTTGGGTGTGTATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR-3UTR CCA 90 bp CAATACACACCCAAAAATCAAGGTCATTATTTCATCCTCACACCTAGTCTACCACTTCTAAATAACCCCTaGAGTAGCGAACTCTTTTCC +
Preference number: 2 (lower is better)
Translates to: QYTPKNQGHYFILTPSLPLLNNP*SSELFS
Trigger: GGAAAAGAGTTCGCTACTCCAGGGGTTATTTAGAAG...TGGTAGACTAGGTGTGAGGATGAAATAATGACCTTGATTTTTGGGTGTGTATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR-3UTR TCA 90 bp CCAGCTATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATTACCAACTTCCTATTTaGAATCAATACTCTCCAACC +
Preference number: 2 (lower is better)
Translates to: PAIWSNIILSVPVRVFLNYQLPI*NQYSPT
Trigger: GGTTGGAGAGTATTGATTTCAAATAGGAAGTTGGTA...ATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAATAGCTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR-3UTR CCA 90 bp ATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATGACATTTTCAGAACTGAGGCCTaGGAGAAAAGTGGTACAAAT +
Preference number: 2 (lower is better)
Translates to: IWSNIILSVPVRVFLNDIFRTEA*EKSGTN
Trigger: ATTTGTACCACTTTTCTCCCAGGCCTCAGTTCTGAA...AATGTCATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR-3UTR TCA 90 bp ATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATGACATTCTAACGGAGAACTTCTaGCAAACAGAAAGATACAGT +
Preference number: 2 (lower is better)
Translates to: IWSNIILSVPVRVFLNDILTENF*QTERYS
Trigger: ACTGTATCTTTCTGTTTGTCAGAAGTTCTCCGTTAG...AATGTCATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR-3UTR TCA 90 bp ATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATGACATTTACCAACTTCCTATTTaGAATCAATACTCTCCAACC +
Preference number: 2 (lower is better)
Translates to: IWSNIILSVPVRVFLNDIYQLPI*NQYSPT
Trigger: GGTTGGAGAGTATTGATTTCAAATAGGAAGTTGGTA...AATGTCATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR TCA 72 bp CAGCTGAGTTCTCTGCAACTGTGTTTCCCAGCTCCCTaGTGTGCTCCTGGGGCTTTTCAGGATTATAGCAAC +
Preference number: 3 (lower is better)
Translates to: QLSSLQLCFPAP*CAPGAFQDYSN
Trigger: GTTGCTATAATCCTGAAAAGCCCCAGGAGCACATCAGGGAGCTGGGAAACACAGTTGCAGAGAACTCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR-3UTR CAA 90 bp AATAACCCCTGGAGTAGCGAACTCTTTTCCCTGAACCTGTGCTGTATCTTGGTATCCATAATCATGGGGTaGGGCCAGGCGACTGAAGTC +
Preference number: 3 (lower is better)
Translates to: NNPWSSELFSLNLCCILVSIIMG*GQATEV
Trigger: GACTTCAGTCGCCTGGCCCAACCCCATGATTATGGA...TACCAAGATACAGCACAGGTTCAGGGAAAAGAGTTCGCTACTCCAGGGGTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR CCA 72 bp TATTCAACATCTCCACCTGCACCTAAACTGATTGTTTaGTTTCCAGGAATCCTCCCTCCAGGTCACTGGGAG +
Preference number: 3 (lower is better)
Translates to: YSTSPPAPKLIV*FPGILPPGHWE
Trigger: CTCCCAGTGACCTGGAGGGAGGATTCCTGGAAACCAAACAATCAGTTTAGGTGCAGGTGGAGATGTTGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR CCA 72 bp GCTGCCATCAGACTGGAACTAAACCATCAGCTCTCATaGGACTCCATCTTGCTGACTTATCCTGCAGATCTT +
Preference number: 3 (lower is better)
Translates to: AAIRLELNHQLS*DSILLTYPADL
Trigger: AAGATCTGCAGGATAAGTCAGCAAGATGGAGTCCCATGAGAGCTGATGGTTTAGTTCCAGTCTGATGGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR-3UTR CAA 90 bp CGAACTCTTTTCCCTGAACCTGTGCTGTATCTTGGTAACACATATTCAACATCTTCCATAATCATGGGGTaGGGCCAGGCGACTGAAGTC +
Preference number: 3 (lower is better)
Translates to: RTLFPEPVLYLGNTYSTSSIIMG*GQATEV
Trigger: GACTTCAGTCGCCTGGCCCAACCCCATGATTATGGA...AGATGTTGAATATGTGTTACCAAGATACAGCACAGGTTCAGGGAAAAGAGTTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR CCA 72 bp AGGATGAGGCAGAGAAAGTGTCTTCTAAATAACCCCTaGAGTAGCGAACTCTTTTCCCTGAACCTGTGCTGT +
Preference number: 3 (lower is better)
Translates to: RMRQRKCLLNNP*SSELFSLNLCC
Trigger: ACAGCACAGGTTCAGGGAAAAGAGTTCGCTACTCCAGGGGTTATTTAGAAGACACTTTCTCTGCCTCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR-3UTR CAA 90 bp CCAGCTATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATAACATCATCTCTTCCTaGGCGTCAAGCCTGCTGCCA +
Preference number: 3 (lower is better)
Translates to: PAIWSNIILSVPVRVFLNNIISS*ASSLLP
Trigger: TGGCAGCAGGCTTGACGCCAAGGAAGAGATGATGTT...ATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAATAGCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR TCA 72 bp ATATCTCCATGGTTAGGCCAGATCGCATATATGATGTaGCTTGAAAGCGACGAGGCTTCTGCAATACACACC +
Preference number: 3 (lower is better)
Translates to: ISPWLGQIAYMM*LESDEASAIHT
Trigger: GGTGTGTATTGCAGAAGCCTCGTCGCTTTCAAGTCACATCATATATGCGATCTGGCCTAACCATGGAGATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR CCA 72 bp TCTACGTTGGTGGTTAAAACTGCCACTTTTTCTAGCTaGACCTCTCTGAATCTCAGAAAGGGTTGGCACAAC +
Preference number: 3 (lower is better)
Translates to: STLVVKTATFSS*TSLNLRKGWHN
Trigger: GTTGTGCCAACCCTTTCTGAGATTCAGAGAGGTCCAGCTAGAAAAAGTGGCAGTTTTAACCACCAACGTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR CCA 72 bp TATCCACTTAACTGGGTCACAAGATGCCCAGCTATTTaGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTG +
Preference number: 3 (lower is better)
Translates to: YPLNWVTRCPAI*SNIILSVPVRV
Trigger: CACCCTCACAGGAACACTCAGAATAATGTTTGACCAAATAGCTGGGCATCTTGTGACCCAGTTAAGTGGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR-3UTR CAA 90 bp CATCAGCTCTCATGGGACTCCATCTTGCTGACTTATCCTGCAGATCTTGGGATTACAAATACTCAAGTATaGCAGTACAATGGTCTTGTG +
Preference number: 3 (lower is better)
Translates to: HQLSWDSILLTYPADLGITNTQV*QYNGLV
Trigger: CACAAGACCATTGTACTGCAATACTTGAGTATTTGT...AATCCCAAGATCTGCAGGATAAGTCAGCAAGATGGAGTCCCATGAGAGCTGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR-3UTR CAA 90 bp CATCAGCTCTCATGGGACTCCATCTTGCTGACTTATCCTGCAGATCTTGGGATTCTGCCCCAATATATATaGATTCTGTTTCTCTGGAAA +
Preference number: 3 (lower is better)
Translates to: HQLSWDSILLTYPADLGILPQYI*ILFLWK
Trigger: TTTCCAGAGAAACAGAATCAATATATATTGGGGCAG...AATCCCAAGATCTGCAGGATAAGTCAGCAAGATGGAGTCCCATGAGAGCTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR-3UTR CAA 90 bp CCAGCTATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATTCATGGGACTCCATCTaGCTGACTTATCCTGCAGAT +
Preference number: 3 (lower is better)
Translates to: PAIWSNIILSVPVRVFLNSWDSI*LTYPAD
Trigger: ATCTGCAGGATAAGTCAGCAAGATGGAGTCCCATGA...ATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAATAGCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR TCA 72 bp TGTTTCTCAATGACATTAACATTCAAATCAGTAGACTaGGTAATGCAGACTGTCCTCCCAAATGTGGGCGGG +
Preference number: 3 (lower is better)
Translates to: CFSMTLTFKSVD*VMQTVLPNVGG
Trigger: CCCGCCCACATTTGGGAGGACAGTCTGCATTACTCAGTCTACTGATTTGAATGTTAATGTCATTGAGAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR CCA 72 bp AGTGGTACAAATAGAAACCACAAAAGGGTCTGGATTTaGGTTAAGGTGAAGAGACGTTCCATAATCATGGGG +
Preference number: 3 (lower is better)
Translates to: SGTNRNHKRVWI*VKVKRRSIIMG
Trigger: CCCCATGATTATGGAACGTCTCTTCACCTTAACCCAAATCCAGACCCTTTTGTGGTTTCTATTTGTACCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR-3UTR CAA 90 bp CCAGCTATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATGGTTGGCACAACAGATaGATTCATAAGACAGTCACA +
Preference number: 3 (lower is better)
Translates to: PAIWSNIILSVPVRVFLNGWHNR*IHKTVT
Trigger: TGTGACTGTCTTATGAATCAATCTGTTGTGCCAACC...ATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAATAGCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR CCA 72 bp GAGAAAAGTGGTACAAATAGAAACCACAAAAGGGTCTaGATTTGGGTTAAGGTGAAGAGACGTTCCATAATC +
Preference number: 3 (lower is better)
Translates to: EKSGTNRNHKRV*IWVKVKRRSII
Trigger: GATTATGGAACGTCTCTTCACCTTAACCCAAATCCAGACCCTTTTGTGGTTTCTATTTGTACCACTTTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR-3UTR CAA 90 bp CCAGCTATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATAACCTGTGCTGTATCTaGGTAACACATATTCAACAT +
Preference number: 3 (lower is better)
Translates to: PAIWSNIILSVPVRVFLNNLCCI*VTHIQH
Trigger: ATGTTGAATATGTGTTACCAAGATACAGCACAGGTT...ATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAATAGCTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR-3UTR CAA 90 bp ACTGTGATAGTTAATCTTATGTATCCACTTAACTGGGTCACAAGATGCCCAGCTAACCTGTGCTGTATCTaGGTAACACATATTCAACAT +
Preference number: 3 (lower is better)
Translates to: TVIVNLMYPLNWVTRCPANLCCI*VTHIQH
Trigger: ATGTTGAATATGTGTTACCAAGATACAGCACAGGTT...AGCTGGGCATCTTGTGACCCAGTTAAGTGGATACATAAGATTAACTATCACAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR-3UTR CAA 90 bp CCAGCTATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATCTGCCCCAATATATATaGATTCTGTTTCTCTGGAAA +
Preference number: 3 (lower is better)
Translates to: PAIWSNIILSVPVRVFLNLPQYI*ILFLWK
Trigger: TTTCCAGAGAAACAGAATCAATATATATTGGGGCAG...ATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAATAGCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR-3UTR CAA 90 bp ATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATGACATTAACCTAAGAGGCTGTTaGCTACACAAATACTCAAGT +
Preference number: 3 (lower is better)
Translates to: IWSNIILSVPVRVFLNDINLRGC*LHKYSS
Trigger: ACTTGAGTATTTGTGTAGCAAACAGCCTCTTAGGTT...AATGTCATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR GCA 72 bp GTTAATCTTATGTATCCACTTAACTGGGTCACAAGATaGCCAGCTATTTGGTCAAACATTATTCTGAGTGTT +
Preference number: 3 (lower is better)
Translates to: VNLMYPLNWVTR*PAIWSNIILSV
Trigger: AACACTCAGAATAATGTTTGACCAAATAGCTGGGCATCTTGTGACCCAGTTAAGTGGATACATAAGATTAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR-3UTR CAA 90 bp ATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATGACATTACAAATACTCAAGTATaGCAGTACAATGGTCTTGTG +
Preference number: 3 (lower is better)
Translates to: IWSNIILSVPVRVFLNDITNTQV*QYNGLV
Trigger: CACAAGACCATTGTACTGCAATACTTGAGTATTTGT...AATGTCATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CCA 90 bp AGACTGAGTAATGCAGACTGTCCTCCCAAATGTGGGCGGGCCTTGCTGAATCAGGCCACCTCACCTCCTTaGGTACCGTCCCGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: RLSNADCPPKCGRALLNQATSPP*VPSRAR
Trigger: TCTGGCCCGGGACGGTACCCAAGGAGGTGAGGTGGC...CTGATTCAGCAAGGCCCGCCCACATTTGGGAGGACAGTCTGCATTACTCAGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CCA 90 bp AGACTGAGTAATGCAGACTGTCCTCCCAAATGTGGGCGGGCCTTGCTGAATCAGCCGGCATCCCCTGCGTaGCCTGACACATGCACAGAC +
Preference number: 4 (lower is better)
Translates to: RLSNADCPPKCGRALLNQPASPA*PDTCTD
Trigger: GTCTGTGCATGTGTCAGGCCACGCAGGGGATGCCGG...CTGATTCAGCAAGGCCCGCCCACATTTGGGAGGACAGTCTGCATTACTCAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR TCA 90 bp TCTCCACCTGCACCTAAACTGATTGTTTGGTTTCCAGGAATCCTCCCTCCAGGTGTTGGGCCAGGCGACTaGAGTCCAGGGTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: SPPAPKLIVWFPGILPPGVGPGD*SPGCWA
Trigger: AGCCCAGCACCCTGGACTTCAGTCGCCTGGCCCAAC...ACCTGGAGGGAGGATTCCTGGAAACCAAACAATCAGTTTAGGTGCAGGTGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR GCA 90 bp CATCAGCTCTCATGGGACTCCATCTTGCTGACTTATCCTGCAGATCTTGGGATTGGGCCACGTGGAACTTaGCGGCATCCCCTGCGTGGC +
Preference number: 4 (lower is better)
Translates to: HQLSWDSILLTYPADLGIGPRGT*RHPLRG
Trigger: GCCACGCAGGGGATGCCGGCAAGTTCCACGTGGCCC...AATCCCAAGATCTGCAGGATAAGTCAGCAAGATGGAGTCCCATGAGAGCTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR GCA 90 bp AGACTGAGTAATGCAGACTGTCCTCCCAAATGTGGGCGGGCCTTGCTGAATCAGGCGTGGCCTGACACATaGACAGACAGCCGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: RLSNADCPPKCGRALLNQAWPDT*TDSRRK
Trigger: CTTCCTCCGGCTGTCTGTGCATGTGTCAGGCCACGC...CTGATTCAGCAAGGCCCGCCCACATTTGGGAGGACAGTCTGCATTACTCAGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CCA 90 bp AGACTGAGTAATGCAGACTGTCCTCCCAAATGTGGGCGGGCCTTGCTGAATCAGTCCAGGGTGCTGGGCTaGATGGTGATGGGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: RLSNADCPPKCGRALLNQSRVLG*MVMGAG
Trigger: ACCTGCTCCCATCACCATCCAGCCCAGCACCCTGGA...CTGATTCAGCAAGGCCCGCCCACATTTGGGAGGACAGTCTGCATTACTCAGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR TCA 90 bp CATCAGCTCTCATGGGACTCCATCTTGCTGACTTATCCTGCAGATCTTGGGATTGTTGGGCCAGGCGACTaGAGTCCAGGGTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: HQLSWDSILLTYPADLGIVGPGD*SPGCWA
Trigger: AGCCCAGCACCCTGGACTTCAGTCGCCTGGCCCAAC...AATCCCAAGATCTGCAGGATAAGTCAGCAAGATGGAGTCCCATGAGAGCTGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR GCA 90 bp AATAACCCCTGGAGTAGCGAACTCTTTTCCCTGAACCTGTGCTGTATCTTGGTACCCGGAGGCGTTGTCTaGGACTCGGCGGAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: NNPWSSELFSLNLCCILVPGGVV*DSAEAP
Trigger: TGGAGCCTCCGCCGAGTCGCAGACAACGCCTCCGGG...TACCAAGATACAGCACAGGTTCAGGGAAAAGAGTTCGCTACTCCAGGGGTTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372517.8
CDS-3UTR CCA 90 bp CATCAGCTCTCATGGGACTCCATCTTGCTGACTTATCCTGCAGATCTTGGGATTGCCACCTCACCTCCTTaGGTACCGTCCCGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: HQLSWDSILLTYPADLGIATSPP*VPSRAR
Trigger: TCTGGCCCGGGACGGTACCCAAGGAGGTGAGGTGGC...AATCCCAAGATCTGCAGGATAAGTCAGCAAGATGGAGTCCCATGAGAGCTGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CCA 90 bp AATAACCCCTGGAGTAGCGAACTCTTTTCCCTGAACCTGTGCTGTATCTTGGTAGGAGCGCTGCGGGAATaGGGACCGCAGCCACCTCAC +
Preference number: 4 (lower is better)
Translates to: NNPWSSELFSLNLCCILVGALRE*GPQPPH
Trigger: GTGAGGTGGCTGCGGTCCCCATTCCCGCAGCGCTCC...TACCAAGATACAGCACAGGTTCAGGGAAAAGAGTTCGCTACTCCAGGGGTTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR TCA 90 bp AGACTGAGTAATGCAGACTGTCCTCCCAAATGTGGGCGGGCCTTGCTGAATCAGACAGACTCAACAGACTaGGCCTCTGAAGGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: RLSNADCPPKCGRALLNQTDSTD*ASEGLG
Trigger: GCCCAGACCTTCAGAGGCTCAGTCTGTTGAGTCTGT...CTGATTCAGCAAGGCCCGCCCACATTTGGGAGGACAGTCTGCATTACTCAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR GCA 90 bp CATCAGCTCTCATGGGACTCCATCTTGCTGACTTATCCTGCAGATCTTGGGATTAGAGCAGCTCGGCTGTaGCCCCTAGTAGGGCCACGT +
Preference number: 4 (lower is better)
Translates to: HQLSWDSILLTYPADLGIRAARL*PLVGPR
Trigger: ACGTGGCCCTACTAGGGGGCACAGCCGAGCTGCTCT...AATCCCAAGATCTGCAGGATAAGTCAGCAAGATGGAGTCCCATGAGAGCTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR GCA 90 bp AGACTGAGTAATGCAGACTGTCCTCCCAAATGTGGGCGGGCCTTGCTGAATCAGAACACTCCTTCCCCATaGAGAGAGACCAGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: RLSNADCPPKCGRALLNQNTPSP*RETREQ
Trigger: CTGCTCCCTGGTCTCTCTGCATGGGGAAGGAGTGTT...CTGATTCAGCAAGGCCCGCCCACATTTGGGAGGACAGTCTGCATTACTCAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR TCA 90 bp AGACTGAGTAATGCAGACTGTCCTCCCAAATGTGGGCGGGCCTTGCTGAATCAGCCCCTTCCTGCTCACTaGCTCACTACATACTCCAAG +
Preference number: 4 (lower is better)
Translates to: RLSNADCPPKCGRALLNQPLPAH*LTTYSK
Trigger: CTTGGAGTATGTAGTGAGTCAGTGAGCAGGAAGGGG...CTGATTCAGCAAGGCCCGCCCACATTTGGGAGGACAGTCTGCATTACTCAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR GCA 90 bp TCTCCACCTGCACCTAAACTGATTGTTTGGTTTCCAGGAATCCTCCCTCCAGGTGATGGGGCTGCAACCTaGAGGATCACGGTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: SPPAPKLIVWFPGILPPGDGAAT*RITVSS
Trigger: AGAGGACACCGTGATCCTGCAGGTTGCAGCCCCATC...ACCTGGAGGGAGGATTCCTGGAAACCAAACAATCAGTTTAGGTGCAGGTGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR GCA 90 bp TCTCCACCTGCACCTAAACTGATTGTTTGGTTTCCAGGAATCCTCCCTCCAGGTTGGGTCCAGGGTCACTaGCACAAAATGCAACCGGGC +
Preference number: 4 (lower is better)
Translates to: SPPAPKLIVWFPGILPPGWVQGH*HKMQPG
Trigger: GCCCGGTTGCATTTTGTGGCAGTGACCCTGGACCCA...ACCTGGAGGGAGGATTCCTGGAAACCAAACAATCAGTTTAGGTGCAGGTGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR GCA 90 bp AGACTGAGTAATGCAGACTGTCCTCCCAAATGTGGGCGGGCCTTGCTGAATCAGTTGTCAGGTACAGGCTaGCGTCTGTCTCCAAGCCTT +
Preference number: 4 (lower is better)
Translates to: RLSNADCPPKCGRALLNQLSGTG*RLSPSL
Trigger: AAGGCTTGGAGACAGACGGCAGCCTGTACCTGACAA...CTGATTCAGCAAGGCCCGCCCACATTTGGGAGGACAGTCTGCATTACTCAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CCA 90 bp AGACTGAGTAATGCAGACTGTCCTCCCAAATGTGGGCGGGCCTTGCTGAATCAGCTGGAGTTTGCAAGCTaGGAACACTCCTTCCCCATG +
Preference number: 4 (lower is better)
Translates to: RLSNADCPPKCGRALLNQLEFAS*EHSFPM
Trigger: CATGGGGAAGGAGTGTTCCCAGCTTGCAAACTCCAG...CTGATTCAGCAAGGCCCGCCCACATTTGGGAGGACAGTCTGCATTACTCAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR TCA 90 bp AATAACCCCTGGAGTAGCGAACTCTTTTCCCTGAACCTGTGCTGTATCTTGGTACCATCCCGGAATATGTaGACAGCCTGGGAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: NNPWSSELFSLNLCCILVPSRNM*TAWERC
Trigger: GCAGCGCTCCCAGGCTGTTCACATATTCCGGGATGG...TACCAAGATACAGCACAGGTTCAGGGAAAAGAGTTCGCTACTCCAGGGGTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR GCA 90 bp CGAACTCTTTTCCCTGAACCTGTGCTGTATCTTGGTAACACATATTCAACATCTACAGCCTGGGAGCGCTaGGGGAATGGGGACCGCAGC +
Preference number: 4 (lower is better)
Translates to: RTLFPEPVLYLGNTYSTSTAWER*GNGDRS
Trigger: GCTGCGGTCCCCATTCCCGCAGCGCTCCCAGGCTGT...AGATGTTGAATATGTGTTACCAAGATACAGCACAGGTTCAGGGAAAAGAGTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR GCA 90 bp AATAACCCCTGGAGTAGCGAACTCTTTTCCCTGAACCTGTGCTGTATCTTGGTACCCCACAGATGGGGCTaGAACCTGCAGGATCACGGT +
Preference number: 4 (lower is better)
Translates to: NNPWSSELFSLNLCCILVPHRWG*NLQDHG
Trigger: ACCGTGATCCTGCAGGTTGCAGCCCCATCTGTGGGG...TACCAAGATACAGCACAGGTTCAGGGAAAAGAGTTCGCTACTCCAGGGGTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR GCA 90 bp AGACTGAGTAATGCAGACTGTCCTCCCAAATGTGGGCGGGCCTTGCTGAATCAGGGCAAAGCTGGAGTTTaGAAGCTGGGAACACTCCTT +
Preference number: 4 (lower is better)
Translates to: RLSNADCPPKCGRALLNQGKAGV*KLGTLL
Trigger: AAGGAGTGTTCCCAGCTTGCAAACTCCAGCTTTGCC...CTGATTCAGCAAGGCCCGCCCACATTTGGGAGGACAGTCTGCATTACTCAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CCA 90 bp AGACTGAGTAATGCAGACTGTCCTCCCAAATGTGGGCGGGCCTTGCTGAATCAGCTTTCCCTTCTGGCCTaGGGACAATTGATTCCTCTG +
Preference number: 4 (lower is better)
Translates to: RLSNADCPPKCGRALLNQLSLLA*GQLIPL
Trigger: CAGAGGAATCAATTGTCCCCAGGCCAGAAGGGAAAG...CTGATTCAGCAAGGCCCGCCCACATTTGGGAGGACAGTCTGCATTACTCAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CCA 90 bp AGACTGAGTAATGCAGACTGTCCTCCCAAATGTGGGCGGGCCTTGCTGAATCAGACATCTCCATTAGCATaGCCTTTCCCTTCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: RLSNADCPPKCGRALLNQTSPLA*PFPSGL
Trigger: CAGGCCAGAAGGGAAAGGCCATGCTAATGGAGATGT...CTGATTCAGCAAGGCCCGCCCACATTTGGGAGGACAGTCTGCATTACTCAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CCA 90 bp AGACTGAGTAATGCAGACTGTCCTCCCAAATGTGGGCGGGCCTTGCTGAATCAGCTCCCTCCAGGTCACTaGGAGCTTCAATTCCTTAGA +
Preference number: 4 (lower is better)
Translates to: RLSNADCPPKCGRALLNQLPPGH*ELQFLR
Trigger: TCTAAGGAATTGAAGCTCCCAGTGACCTGGAGGGAG...CTGATTCAGCAAGGCCCGCCCACATTTGGGAGGACAGTCTGCATTACTCAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CCA 90 bp AATAACCCCTGGAGTAGCGAACTCTTTTCCCTGAACCTGTGCTGTATCTTGGTAGGCTCCAACTTCCAGTaGCCCGGTCGGGAAAGGTAC +
Preference number: 4 (lower is better)
Translates to: NNPWSSELFSLNLCCILVGSNFQ*PGRERY
Trigger: GTACCTTTCCCGACCGGGCCACTGGAAGTTGGAGCC...TACCAAGATACAGCACAGGTTCAGGGAAAAGAGTTCGCTACTCCAGGGGTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372517.8
CDS-3UTR CCA 90 bp AGACTGAGTAATGCAGACTGTCCTCCCAAATGTGGGCGGGCCTTGCTGAATCAGGAAGGCCTAGGGATGTaGGCCGGGAAAAGTTCATAT +
Preference number: 4 (lower is better)
Translates to: RLSNADCPPKCGRALLNQEGLGM*AGKSSY
Trigger: ATATGAACTTTTCCCGGCCCACATCCCTAGGCCTTC...CTGATTCAGCAAGGCCCGCCCACATTTGGGAGGACAGTCTGCATTACTCAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372514.7
CDS-3UTR TCA 90 bp TCTCCACCTGCACCTAAACTGATTGTTTGGTTTCCAGGAATCCTCCCTCCAGGTCAAGGATCTGCAGAGTaGCACTTCCCTCTTGGGCAT +
Preference number: 4 (lower is better)
Translates to: SPPAPKLIVWFPGILPPGQGSAE*HFPLGH
Trigger: ATGCCCAAGAGGGAAGTGTCACTCTGCAGATCCTTG...ACCTGGAGGGAGGATTCCTGGAAACCAAACAATCAGTTTAGGTGCAGGTGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR TCA 90 bp CATCAGCTCTCATGGGACTCCATCTTGCTGACTTATCCTGCAGATCTTGGGATTAGTGGCAGCCAGTCGTaGAGTACTCAGAGCCTAGGA +
Preference number: 4 (lower is better)
Translates to: HQLSWDSILLTYPADLGISGSQS*STQSLG
Trigger: TCCTAGGCTCTGAGTACTTCACGACTGGCTGCCACT...AATCCCAAGATCTGCAGGATAAGTCAGCAAGATGGAGTCCCATGAGAGCTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR TCA 90 bp TCTCCACCTGCACCTAAACTGATTGTTTGGTTTCCAGGAATCCTCCCTCCAGGTAGGTCTGCGGGGATGTaGGAGCTTCATACTCATTCC +
Preference number: 4 (lower is better)
Translates to: SPPAPKLIVWFPGILPPGRSAGM*ELHTHS
Trigger: GGAATGAGTATGAAGCTCTCACATCCCCGCAGACCT...ACCTGGAGGGAGGATTCCTGGAAACCAAACAATCAGTTTAGGTGCAGGTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR TCA 90 bp AGACTGAGTAATGCAGACTGTCCTCCCAAATGTGGGCGGGCCTTGCTGAATCAGAGGGCAACATACAGCTaGGTTCTCTGCAACTGTGTT +
Preference number: 4 (lower is better)
Translates to: RLSNADCPPKCGRALLNQRATYS*VLCNCV
Trigger: AACACAGTTGCAGAGAACTCAGCTGTATGTTGCCCT...CTGATTCAGCAAGGCCCGCCCACATTTGGGAGGACAGTCTGCATTACTCAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR GCA 90 bp TCTCCACCTGCACCTAAACTGATTGTTTGGTTTCCAGGAATCCTCCCTCCAGGTGATGAGTTTGGGATGTaGTGTGTCTGGGTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: SPPAPKLIVWFPGILPPGDEFGM*CVWVQG
Trigger: ACCCTGGACCCAGACACAGCACATCCCAAACTCATC...ACCTGGAGGGAGGATTCCTGGAAACCAAACAATCAGTTTAGGTGCAGGTGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR GCA 90 bp AATAACCCCTGGAGTAGCGAACTCTTTTCCCTGAACCTGTGCTGTATCTTGGTAAGGCGGAAGGAGGTCTaGGGGGATGTGAGAGCTTCA +
Preference number: 4 (lower is better)
Translates to: NNPWSSELFSLNLCCILVRRKEV*GDVRAS
Trigger: TGAAGCTCTCACATCCCCGCAGACCTCCTTCCGCCT...TACCAAGATACAGCACAGGTTCAGGGAAAAGAGTTCGCTACTCCAGGGGTTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CCA 90 bp CGAACTCTTTTCCCTGAACCTGTGCTGTATCTTGGTAACACATATTCAACATCTGACTCCCAAGCCTCTTaGTCGGCGGCTCCAGCGACC +
Preference number: 4 (lower is better)
Translates to: RTLFPEPVLYLGNTYSTSDSQAS*SAAPAT
Trigger: GGTCGCTGGAGCCGCCGACCAAGAGGCTTGGGAGTC...AGATGTTGAATATGTGTTACCAAGATACAGCACAGGTTCAGGGAAAAGAGTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372517.8
CDS-3UTR CCA 90 bp TCTCCACCTGCACCTAAACTGATTGTTTGGTTTCCAGGAATCCTCCCTCCAGGTCATCCGAACACCTTCTaGATCAGGGACGCTTGTTCC +
Preference number: 4 (lower is better)
Translates to: SPPAPKLIVWFPGILPPGHPNTF*IRDACS
Trigger: GGAACAAGCGTCCCTGATCCAGAAGGTGTTCGGATG...ACCTGGAGGGAGGATTCCTGGAAACCAAACAATCAGTTTAGGTGCAGGTGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR TCA 90 bp CATCAGCTCTCATGGGACTCCATCTTGCTGACTTATCCTGCAGATCTTGGGATTGGCTCTTCTCCAGCCTaGGTTTGCTGCAGCTCTTTT +
Preference number: 4 (lower is better)
Translates to: HQLSWDSILLTYPADLGIGSSPA*VCCSSF
Trigger: AAAAGAGCTGCAGCAAACTCAGGCTGGAGAAGAGCC...AATCCCAAGATCTGCAGGATAAGTCAGCAAGATGGAGTCCCATGAGAGCTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR TCA 90 bp AGACTGAGTAATGCAGACTGTCCTCCCAAATGTGGGCGGGCCTTGCTGAATCAGATCGCATATATGATGTaGCTTGAAAGCGACGAGGCT +
Preference number: 4 (lower is better)
Translates to: RLSNADCPPKCGRALLNQIAYMM*LESDEA
Trigger: AGCCTCGTCGCTTTCAAGTCACATCATATATGCGAT...CTGATTCAGCAAGGCCCGCCCACATTTGGGAGGACAGTCTGCATTACTCAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR GCA 90 bp ATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATGACATTGGGCCACGTGGAACTTaGCGGCATCCCCTGCGTGGC +
Preference number: 4 (lower is better)
Translates to: IWSNIILSVPVRVFLNDIGPRGT*RHPLRG
Trigger: GCCACGCAGGGGATGCCGGCAAGTTCCACGTGGCCC...AATGTCATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR GCA 90 bp CGAACTCTTTTCCCTGAACCTGTGCTGTATCTTGGTAACACATATTCAACATCTAGAGCAGCTCGGCTGTaGCCCCTAGTAGGGCCACGT +
Preference number: 4 (lower is better)
Translates to: RTLFPEPVLYLGNTYSTSRAARL*PLVGPR
Trigger: ACGTGGCCCTACTAGGGGGCACAGCCGAGCTGCTCT...AGATGTTGAATATGTGTTACCAAGATACAGCACAGGTTCAGGGAAAAGAGTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR GCA 90 bp CATCAGCTCTCATGGGACTCCATCTTGCTGACTTATCCTGCAGATCTTGGGATTCGCACGTCAAGGATCTaGAGAGTGACACTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: HQLSWDSILLTYPADLGIRTSRI*RVTLPS
Trigger: AGAGGGAAGTGTCACTCTGCAGATCCTTGACGTGCG...AATCCCAAGATCTGCAGGATAAGTCAGCAAGATGGAGTCCCATGAGAGCTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR GCA 90 bp CATCAGCTCTCATGGGACTCCATCTTGCTGACTTATCCTGCAGATCTTGGGATTGTCACTGCCACAAAATaGAACCGGGCTCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: HQLSWDSILLTYPADLGIVTATK*NRALLQ
Trigger: CTGGAGAAGAGCCCGGTTGCATTTTGTGGCAGTGAC...AATCCCAAGATCTGCAGGATAAGTCAGCAAGATGGAGTCCCATGAGAGCTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR GCA 90 bp TCTCCACCTGCACCTAAACTGATTGTTTGGTTTCCAGGAATCCTCCCTCCAGGTTGGCGTCAAGCCTGCTaGCATCAGACTGGAACTAAA +
Preference number: 4 (lower is better)
Translates to: SPPAPKLIVWFPGILPPGWRQAC*HQTGTK
Trigger: TTTAGTTCCAGTCTGATGGCAGCAGGCTTGACGCCA...ACCTGGAGGGAGGATTCCTGGAAACCAAACAATCAGTTTAGGTGCAGGTGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR GCA 90 bp AATAACCCCTGGAGTAGCGAACTCTTTTCCCTGAACCTGTGCTGTATCTTGGTACCTTGGCGTCAAGCCTaGTGCCATCAGACTGGAACT +
Preference number: 4 (lower is better)
Translates to: NNPWSSELFSLNLCCILVPWRQA*CHQTGT
Trigger: AGTTCCAGTCTGATGGCAGCAGGCTTGACGCCAAGG...TACCAAGATACAGCACAGGTTCAGGGAAAAGAGTTCGCTACTCCAGGGGTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CCA 90 bp CATCAGCTCTCATGGGACTCCATCTTGCTGACTTATCCTGCAGATCTTGGGATTAATCCCCACACACCGTaGAGGCTCTTTAAGGCGGAA +
Preference number: 4 (lower is better)
Translates to: HQLSWDSILLTYPADLGINPHTP*RLFKAE
Trigger: TTCCGCCTTAAAGAGCCTCCACGGTGTGTGGGGATT...AATCCCAAGATCTGCAGGATAAGTCAGCAAGATGGAGTCCCATGAGAGCTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CCA 90 bp TCTCCACCTGCACCTAAACTGATTGTTTGGTTTCCAGGAATCCTCCCTCCAGGTTCTCACAGGCAAAGCTaGAGTTTGCAAGCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: SPPAPKLIVWFPGILPPGSHRQS*SLQAGN
Trigger: GTTCCCAGCTTGCAAACTCCAGCTTTGCCTGTGAGA...ACCTGGAGGGAGGATTCCTGGAAACCAAACAATCAGTTTAGGTGCAGGTGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR TCA 90 bp CCAGCTATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATCCATCCCGGAATATGTaGACAGCCTGGGAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: PAIWSNIILSVPVRVFLNPSRNM*TAWERC
Trigger: GCAGCGCTCCCAGGCTGTTCACATATTCCGGGATGG...ATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAATAGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR TCA 90 bp AGACTGAGTAATGCAGACTGTCCTCCCAAATGTGGGCGGGCCTTGCTGAATCAGTTCTTTAGCATGGTCTaGAAGAAGATTGTCCACCTC +
Preference number: 4 (lower is better)
Translates to: RLSNADCPPKCGRALLNQFFSMV*KKIVHL
Trigger: GAGGTGGACAATCTTCTTTCAGACCATGCTAAAGAA...CTGATTCAGCAAGGCCCGCCCACATTTGGGAGGACAGTCTGCATTACTCAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR TCA 90 bp AATAACCCCTGGAGTAGCGAACTCTTTTCCCTGAACCTGTGCTGTATCTTGGTACCCCTTCCTGCTCACTaGCTCACTACATACTCCAAG +
Preference number: 4 (lower is better)
Translates to: NNPWSSELFSLNLCCILVPLPAH*LTTYSK
Trigger: CTTGGAGTATGTAGTGAGTCAGTGAGCAGGAAGGGG...TACCAAGATACAGCACAGGTTCAGGGAAAAGAGTTCGCTACTCCAGGGGTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR TCA 90 bp AATAACCCCTGGAGTAGCGAACTCTTTTCCCTGAACCTGTGCTGTATCTTGGTACTAGCTGGACCTCTCTaGATCTCAGAAAGGGTTGGC +
Preference number: 4 (lower is better)
Translates to: NNPWSSELFSLNLCCILVLAGPL*ISERVG
Trigger: GCCAACCCTTTCTGAGATTCAGAGAGGTCCAGCTAG...TACCAAGATACAGCACAGGTTCAGGGAAAAGAGTTCGCTACTCCAGGGGTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR GCA 90 bp CGAACTCTTTTCCCTGAACCTGTGCTGTATCTTGGTAACACATATTCAACATCTGCGTGGCCTGACACATaGACAGACAGCCGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: RTLFPEPVLYLGNTYSTSAWPDT*TDSRRK
Trigger: CTTCCTCCGGCTGTCTGTGCATGTGTCAGGCCACGC...AGATGTTGAATATGTGTTACCAAGATACAGCACAGGTTCAGGGAAAAGAGTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CCA 90 bp ACTGTGATAGTTAATCTTATGTATCCACTTAACTGGGTCACAAGATGCCCAGCTCCTAGTAGGGCCACGTaGAACTTGCCGGCATCCCCT +
Preference number: 4 (lower is better)
Translates to: TVIVNLMYPLNWVTRCPAPSRAT*NLPASP
Trigger: AGGGGATGCCGGCAAGTTCCACGTGGCCCTACTAGG...AGCTGGGCATCTTGTGACCCAGTTAAGTGGATACATAAGATTAACTATCACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CCA 90 bp CCAGCTATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATCCTAGTAGGGCCACGTaGAACTTGCCGGCATCCCCT +
Preference number: 4 (lower is better)
Translates to: PAIWSNIILSVPVRVFLNPSRAT*NLPASP
Trigger: AGGGGATGCCGGCAAGTTCCACGTGGCCCTACTAGG...ATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAATAGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CCA 90 bp AGACTGAGTAATGCAGACTGTCCTCCCAAATGTGGGCGGGCCTTGCTGAATCAGAGCCTTACACATCTTTaGTCCTCAGAAAGGATGAGT +
Preference number: 4 (lower is better)
Translates to: RLSNADCPPKCGRALLNQSLTHL*SSERMS
Trigger: ACTCATCCTTTCTGAGGACCAAAGATGTGTAAGGCT...CTGATTCAGCAAGGCCCGCCCACATTTGGGAGGACAGTCTGCATTACTCAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CCA 90 bp AATAACCCCTGGAGTAGCGAACTCTTTTCCCTGAACCTGTGCTGTATCTTGGTAAATCCCCACACACCGTaGAGGCTCTTTAAGGCGGAA +
Preference number: 4 (lower is better)
Translates to: NNPWSSELFSLNLCCILVNPHTP*RLFKAE
Trigger: TTCCGCCTTAAAGAGCCTCCACGGTGTGTGGGGATT...TACCAAGATACAGCACAGGTTCAGGGAAAAGAGTTCGCTACTCCAGGGGTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CCA 90 bp CATCAGCTCTCATGGGACTCCATCTTGCTGACTTATCCTGCAGATCTTGGGATTACATCTCCATTAGCATaGCCTTTCCCTTCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: HQLSWDSILLTYPADLGITSPLA*PFPSGL
Trigger: CAGGCCAGAAGGGAAAGGCCATGCTAATGGAGATGT...AATCCCAAGATCTGCAGGATAAGTCAGCAAGATGGAGTCCCATGAGAGCTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CCA 90 bp AGACTGAGTAATGCAGACTGTCCTCCCAAATGTGGGCGGGCCTTGCTGAATCAGCCTAAACTGATTGTTTaGTTTCCAGGAATCCTCCCT +
Preference number: 4 (lower is better)
Translates to: RLSNADCPPKCGRALLNQPKLIV*FPGILP
Trigger: AGGGAGGATTCCTGGAAACCAAACAATCAGTTTAGG...CTGATTCAGCAAGGCCCGCCCACATTTGGGAGGACAGTCTGCATTACTCAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CCA 90 bp CAATACACACCCAAAAATCAAGGTCATTATTTCATCCTCACACCTAGTCTACCACCGGCATCCCCTGCGTaGCCTGACACATGCACAGAC +
Preference number: 4 (lower is better)
Translates to: QYTPKNQGHYFILTPSLPPASPA*PDTCTD
Trigger: GTCTGTGCATGTGTCAGGCCACGCAGGGGATGCCGG...TGGTAGACTAGGTGTGAGGATGAAATAATGACCTTGATTTTTGGGTGTGTATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR TCA 90 bp CATCAGCTCTCATGGGACTCCATCTTGCTGACTTATCCTGCAGATCTTGGGATTGCCAGATCGCATATATaGTGTGACTTGAAAGCGACG +
Preference number: 4 (lower is better)
Translates to: HQLSWDSILLTYPADLGIARSHI*CDLKAT
Trigger: CGTCGCTTTCAAGTCACATCATATATGCGATCTGGC...AATCCCAAGATCTGCAGGATAAGTCAGCAAGATGGAGTCCCATGAGAGCTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR TCA 90 bp AGACTGAGTAATGCAGACTGTCCTCCCAAATGTGGGCGGGCCTTGCTGAATCAGCTAACGGAGAACTTCTaGCAAACAGAAAGATACAGT +
Preference number: 4 (lower is better)
Translates to: RLSNADCPPKCGRALLNQLTENF*QTERYS
Trigger: ACTGTATCTTTCTGTTTGTCAGAAGTTCTCCGTTAG...CTGATTCAGCAAGGCCCGCCCACATTTGGGAGGACAGTCTGCATTACTCAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR GCA 90 bp CGAACTCTTTTCCCTGAACCTGTGCTGTATCTTGGTAACACATATTCAACATCTTGGGTCCAGGGTCACTaGCACAAAATGCAACCGGGC +
Preference number: 4 (lower is better)
Translates to: RTLFPEPVLYLGNTYSTSWVQGH*HKMQPG
Trigger: GCCCGGTTGCATTTTGTGGCAGTGACCCTGGACCCA...AGATGTTGAATATGTGTTACCAAGATACAGCACAGGTTCAGGGAAAAGAGTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR GCA 90 bp CGAACTCTTTTCCCTGAACCTGTGCTGTATCTTGGTAACACATATTCAACATCTAGGCGGAAGGAGGTCTaGGGGGATGTGAGAGCTTCA +
Preference number: 4 (lower is better)
Translates to: RTLFPEPVLYLGNTYSTSRRKEV*GDVRAS
Trigger: TGAAGCTCTCACATCCCCGCAGACCTCCTTCCGCCT...AGATGTTGAATATGTGTTACCAAGATACAGCACAGGTTCAGGGAAAAGAGTTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR GCA 90 bp AATAACCCCTGGAGTAGCGAACTCTTTTCCCTGAACCTGTGCTGTATCTTGGTATGGCGTCAAGCCTGCTaGCATCAGACTGGAACTAAA +
Preference number: 4 (lower is better)
Translates to: NNPWSSELFSLNLCCILVWRQAC*HQTGTK
Trigger: TTTAGTTCCAGTCTGATGGCAGCAGGCTTGACGCCA...TACCAAGATACAGCACAGGTTCAGGGAAAAGAGTTCGCTACTCCAGGGGTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CCA 90 bp TCTCCACCTGCACCTAAACTGATTGTTTGGTTTCCAGGAATCCTCCCTCCAGGTCTGCCTAATAGCCTTTaGACAGGACCATCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: SPPAPKLIVWFPGILPPGLPNSL*TGPSAF
Trigger: AAAAGCTGATGGTCCTGTCCAAAGGCTATTAGGCAG...ACCTGGAGGGAGGATTCCTGGAAACCAAACAATCAGTTTAGGTGCAGGTGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR TCA 90 bp CATCAGCTCTCATGGGACTCCATCTTGCTGACTTATCCTGCAGATCTTGGGATTCACTCCGGAGTTTCTTaGCAGCTTTATGGAGTTTTC +
Preference number: 4 (lower is better)
Translates to: HQLSWDSILLTYPADLGIHSGVS*QLYGVF
Trigger: GAAAACTCCATAAAGCTGTCAAGAAACTCCGGAGTG...AATCCCAAGATCTGCAGGATAAGTCAGCAAGATGGAGTCCCATGAGAGCTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR TCA 90 bp CCAGCTATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATGTGTCCATTGGCAGGTaGGGCAGTAACCTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: PAIWSNIILSVPVRVFLNVSIGR*GSNLPL
Trigger: AAGGGGAAGGTTACTGCCTCACCTGCCAATGGACAC...ATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAATAGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR TCA 90 bp ACTGTGATAGTTAATCTTATGTATCCACTTAACTGGGTCACAAGATGCCCAGCTGTGTCCATTGGCAGGTaGGGCAGTAACCTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: TVIVNLMYPLNWVTRCPAVSIGR*GSNLPL
Trigger: AAGGGGAAGGTTACTGCCTCACCTGCCAATGGACAC...AGCTGGGCATCTTGTGACCCAGTTAAGTGGATACATAAGATTAACTATCACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR TCA 90 bp CGAACTCTTTTCCCTGAACCTGTGCTGTATCTTGGTAACACATATTCAACATCTAAAAAGAAGGAGCCTTaGGCTCCTGAAGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: RTLFPEPVLYLGNTYSTSKKKEP*APEGLG
Trigger: GCCCAGCCCTTCAGGAGCTCAAGGCTCCTTCTTTTT...AGATGTTGAATATGTGTTACCAAGATACAGCACAGGTTCAGGGAAAAGAGTTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR TCA 90 bp CCAGCTATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATAAAAAGAAGGAGCCTTaGGCTCCTGAAGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: PAIWSNIILSVPVRVFLNKKKEP*APEGLG
Trigger: GCCCAGCCCTTCAGGAGCTCAAGGCTCCTTCTTTTT...ATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAATAGCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR TCA 90 bp CGAACTCTTTTCCCTGAACCTGTGCTGTATCTTGGTAACACATATTCAACATCTTGTTTCCCAGCTCCCTaGTGTGCTCCTGGGGCTTTT +
Preference number: 4 (lower is better)
Translates to: RTLFPEPVLYLGNTYSTSCFPAP*CAPGAF
Trigger: AAAAGCCCCAGGAGCACATCAGGGAGCTGGGAAACA...AGATGTTGAATATGTGTTACCAAGATACAGCACAGGTTCAGGGAAAAGAGTTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR TCA 90 bp CCAGCTATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATAACAGACTGAGCCTCTaGAGGTCTGGGCCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: PAIWSNIILSVPVRVFLNNRLSL*RSGPRS
Trigger: TGACCTTGGCCCAGACCTTCAGAGGCTCAGTCTGTT...ATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAATAGCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR TCA 90 bp CGAACTCTTTTCCCTGAACCTGTGCTGTATCTTGGTAACACATATTCAACATCTACAGACTCAACAGACTaGGCCTCTGAAGGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: RTLFPEPVLYLGNTYSTSTDSTD*ASEGLG
Trigger: GCCCAGACCTTCAGAGGCTCAGTCTGTTGAGTCTGT...AGATGTTGAATATGTGTTACCAAGATACAGCACAGGTTCAGGGAAAAGAGTTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR GCA 90 bp ATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATGACATTCCCCACAGATGGGGCTaGAACCTGCAGGATCACGGT +
Preference number: 4 (lower is better)
Translates to: IWSNIILSVPVRVFLNDIPHRWG*NLQDHG
Trigger: ACCGTGATCCTGCAGGTTGCAGCCCCATCTGTGGGG...AATGTCATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR GCA 90 bp CCAGCTATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATCCTTGGCGTCAAGCCTaGTGCCATCAGACTGGAACT +
Preference number: 4 (lower is better)
Translates to: PAIWSNIILSVPVRVFLNPWRQA*CHQTGT
Trigger: AGTTCCAGTCTGATGGCAGCAGGCTTGACGCCAAGG...ATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAATAGCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CCA 90 bp AATAACCCCTGGAGTAGCGAACTCTTTTCCCTGAACCTGTGCTGTATCTTGGTAATCAGATCTTCATCCTaGTCCTTCCCATCCCGGAAT +
Preference number: 4 (lower is better)
Translates to: NNPWSSELFSLNLCCILVIRSSS*SFPSRN
Trigger: ATTCCGGGATGGGAAGGACCAGGATGAAGATCTGAT...TACCAAGATACAGCACAGGTTCAGGGAAAAGAGTTCGCTACTCCAGGGGTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CCA 90 bp AATAACCCCTGGAGTAGCGAACTCTTTTCCCTGAACCTGTGCTGTATCTTGGTAACGAAATCAAATCTCTaGGGGTTGTCAGGTACAGGC +
Preference number: 4 (lower is better)
Translates to: NNPWSSELFSLNLCCILVTKSNL*GLSGTG
Trigger: GCCTGTACCTGACAACCCCCAGAGATTTGATTTCGT...TACCAAGATACAGCACAGGTTCAGGGAAAAGAGTTCGCTACTCCAGGGGTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CCA 90 bp TCTCCACCTGCACCTAAACTGATTGTTTGGTTTCCAGGAATCCTCCCTCCAGGTTGGGAGCAGGTAATGTaGCATATCCCTAAAAAGAAG +
Preference number: 4 (lower is better)
Translates to: SPPAPKLIVWFPGILPPGWEQVM*HIPKKK
Trigger: CTTCTTTTTAGGGATATGCCACATTACCTGCTCCCA...ACCTGGAGGGAGGATTCCTGGAAACCAAACAATCAGTTTAGGTGCAGGTGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CCA 90 bp TCTCCACCTGCACCTAAACTGATTGTTTGGTTTCCAGGAATCCTCCCTCCAGGTCTTCTAAATAACCCCTaGAGTAGCGAACTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: SPPAPKLIVWFPGILPPGLLNNP*SSELFS
Trigger: GGAAAAGAGTTCGCTACTCCAGGGGTTATTTAGAAG...ACCTGGAGGGAGGATTCCTGGAAACCAAACAATCAGTTTAGGTGCAGGTGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CCA 90 bp CATCAGCTCTCATGGGACTCCATCTTGCTGACTTATCCTGCAGATCTTGGGATTGCCACTTTTTCTAGCTaGACCTCTCTGAATCTCAGA +
Preference number: 4 (lower is better)
Translates to: HQLSWDSILLTYPADLGIATFSS*TSLNLR
Trigger: TCTGAGATTCAGAGAGGTCCAGCTAGAAAAAGTGGC...AATCCCAAGATCTGCAGGATAAGTCAGCAAGATGGAGTCCCATGAGAGCTGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR TCA 90 bp CCAGCTATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATCAAGGATCTGCAGAGTaGCACTTCCCTCTTGGGCAT +
Preference number: 4 (lower is better)
Translates to: PAIWSNIILSVPVRVFLNQGSAE*HFPLGH
Trigger: ATGCCCAAGAGGGAAGTGTCACTCTGCAGATCCTTG...ATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAATAGCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR TCA 90 bp ACTGTGATAGTTAATCTTATGTATCCACTTAACTGGGTCACAAGATGCCCAGCTGGCTCTTCTCCAGCCTaGGTTTGCTGCAGCTCTTTT +
Preference number: 4 (lower is better)
Translates to: TVIVNLMYPLNWVTRCPAGSSPA*VCCSSF
Trigger: AAAAGAGCTGCAGCAAACTCAGGCTGGAGAAGAGCC...AGCTGGGCATCTTGTGACCCAGTTAAGTGGATACATAAGATTAACTATCACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR TCA 90 bp CAATACACACCCAAAAATCAAGGTCATTATTTCATCCTCACACCTAGTCTACCATGTTTCCCAGCTCCCTaGTGTGCTCCTGGGGCTTTT +
Preference number: 4 (lower is better)
Translates to: QYTPKNQGHYFILTPSLPCFPAP*CAPGAF
Trigger: AAAAGCCCCAGGAGCACATCAGGGAGCTGGGAAACA...TGGTAGACTAGGTGTGAGGATGAAATAATGACCTTGATTTTTGGGTGTGTATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR TCA 90 bp TCTCCACCTGCACCTAAACTGATTGTTTGGTTTCCAGGAATCCTCCCTCCAGGTGTTGGCACAACAGATTaGTTCATAAGACAGTCACAA +
Preference number: 4 (lower is better)
Translates to: SPPAPKLIVWFPGILPPGVGTTD*FIRQSQ
Trigger: TTGTGACTGTCTTATGAATCAATCTGTTGTGCCAAC...ACCTGGAGGGAGGATTCCTGGAAACCAAACAATCAGTTTAGGTGCAGGTGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR TCA 90 bp AATAACCCCTGGAGTAGCGAACTCTTTTCCCTGAACCTGTGCTGTATCTTGGTAATATATGATGTGACTTaGAAGCGACGAGGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: NNPWSSELFSLNLCCILVIYDVT*KRRGFC
Trigger: GCAGAAGCCTCGTCGCTTTCAAGTCACATCATATAT...TACCAAGATACAGCACAGGTTCAGGGAAAAGAGTTCGCTACTCCAGGGGTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR TCA 90 bp TCTCCACCTGCACCTAAACTGATTGTTTGGTTTCCAGGAATCCTCCCTCCAGGTTTCTCTGGAAAACCTTaGCTAATACAGGAACTAACG +
Preference number: 4 (lower is better)
Translates to: SPPAPKLIVWFPGILPPGFSGKP*LIQELT
Trigger: CGTTAGTTCCTGTATTAGTCAAGGTTTTCCAGAGAA...ACCTGGAGGGAGGATTCCTGGAAACCAAACAATCAGTTTAGGTGCAGGTGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR GCA 90 bp ATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATGACATTGATGGGGCTGCAACCTaGAGGATCACGGTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: IWSNIILSVPVRVFLNDIDGAAT*RITVSS
Trigger: AGAGGACACCGTGATCCTGCAGGTTGCAGCCCCATC...AATGTCATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR GCA 90 bp ACTGTGATAGTTAATCTTATGTATCCACTTAACTGGGTCACAAGATGCCCAGCTGTCACTGCCACAAAATaGAACCGGGCTCTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: TVIVNLMYPLNWVTRCPAVTATK*NRALLQ
Trigger: CTGGAGAAGAGCCCGGTTGCATTTTGTGGCAGTGAC...AGCTGGGCATCTTGTGACCCAGTTAAGTGGATACATAAGATTAACTATCACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR GCA 90 bp CGAACTCTTTTCCCTGAACCTGTGCTGTATCTTGGTAACACATATTCAACATCTTTGTCAGGTACAGGCTaGCGTCTGTCTCCAAGCCTT +
Preference number: 4 (lower is better)
Translates to: RTLFPEPVLYLGNTYSTSLSGTG*RLSPSL
Trigger: AAGGCTTGGAGACAGACGGCAGCCTGTACCTGACAA...AGATGTTGAATATGTGTTACCAAGATACAGCACAGGTTCAGGGAAAAGAGTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CCA 90 bp CCAGCTATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATGTGACACTTCCCTCTTaGGCATCTCTCACTAGCACC +
Preference number: 4 (lower is better)
Translates to: PAIWSNIILSVPVRVFLNVTLPS*ASLTST
Trigger: GGTGCTAGTGAGAGATGCCCAAGAGGGAAGTGTCAC...ATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAATAGCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CCA 90 bp CCAGCTATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATCTGGAGTTTGCAAGCTaGGAACACTCCTTCCCCATG +
Preference number: 4 (lower is better)
Translates to: PAIWSNIILSVPVRVFLNLEFAS*EHSFPM
Trigger: CATGGGGAAGGAGTGTTCCCAGCTTGCAAACTCCAG...ATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAATAGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR TCA 90 bp ATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATGACATTAGTGGCAGCCAGTCGTaGAGTACTCAGAGCCTAGGA +
Preference number: 4 (lower is better)
Translates to: IWSNIILSVPVRVFLNDISGSQS*STQSLG
Trigger: TCCTAGGCTCTGAGTACTTCACGACTGGCTGCCACT...AATGTCATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR GCA 90 bp ATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATGACATTAACACTCCTTCCCCATaGAGAGAGACCAGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: IWSNIILSVPVRVFLNDINTPSP*RETREQ
Trigger: CTGCTCCCTGGTCTCTCTGCATGGGGAAGGAGTGTT...AATGTCATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CCA 90 bp AATAACCCCTGGAGTAGCGAACTCTTTTCCCTGAACCTGTGCTGTATCTTGGTAAGCCTTACACATCTTTaGTCCTCAGAAAGGATGAGT +
Preference number: 4 (lower is better)
Translates to: NNPWSSELFSLNLCCILVSLTHL*SSERMS
Trigger: ACTCATCCTTTCTGAGGACCAAAGATGTGTAAGGCT...TACCAAGATACAGCACAGGTTCAGGGAAAAGAGTTCGCTACTCCAGGGGTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CCA 90 bp CGAACTCTTTTCCCTGAACCTGTGCTGTATCTTGGTAACACATATTCAACATCTCTTTCCCTTCTGGCCTaGGGACAATTGATTCCTCTG +
Preference number: 4 (lower is better)
Translates to: RTLFPEPVLYLGNTYSTSLSLLA*GQLIPL
Trigger: CAGAGGAATCAATTGTCCCCAGGCCAGAAGGGAAAG...AGATGTTGAATATGTGTTACCAAGATACAGCACAGGTTCAGGGAAAAGAGTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CCA 90 bp AATAACCCCTGGAGTAGCGAACTCTTTTCCCTGAACCTGTGCTGTATCTTGGTATGGGAGCAGGTAATGTaGCATATCCCTAAAAAGAAG +
Preference number: 4 (lower is better)
Translates to: NNPWSSELFSLNLCCILVWEQVM*HIPKKK
Trigger: CTTCTTTTTAGGGATATGCCACATTACCTGCTCCCA...TACCAAGATACAGCACAGGTTCAGGGAAAAGAGTTCGCTACTCCAGGGGTTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CCA 90 bp AATAACCCCTGGAGTAGCGAACTCTTTTCCCTGAACCTGTGCTGTATCTTGGTAAAAAGGGTCTGGATTTaGGTTAAGGTGAAGAGACGT +
Preference number: 4 (lower is better)
Translates to: NNPWSSELFSLNLCCILVKRVWI*VKVKRR
Trigger: ACGTCTCTTCACCTTAACCCAAATCCAGACCCTTTT...TACCAAGATACAGCACAGGTTCAGGGAAAAGAGTTCGCTACTCCAGGGGTTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CCA 90 bp AATAACCCCTGGAGTAGCGAACTCTTTTCCCTGAACCTGTGCTGTATCTTGGTATTCAGAACTGAGGCCTaGGAGAAAAGTGGTACAAAT +
Preference number: 4 (lower is better)
Translates to: NNPWSSELFSLNLCCILVFRTEA*EKSGTN
Trigger: ATTTGTACCACTTTTCTCCCAGGCCTCAGTTCTGAA...TACCAAGATACAGCACAGGTTCAGGGAAAAGAGTTCGCTACTCCAGGGGTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CCA 90 bp CGAACTCTTTTCCCTGAACCTGTGCTGTATCTTGGTAACACATATTCAACATCTCTCCCTCCAGGTCACTaGGAGCTTCAATTCCTTAGA +
Preference number: 4 (lower is better)
Translates to: RTLFPEPVLYLGNTYSTSLPPGH*ELQFLR
Trigger: TCTAAGGAATTGAAGCTCCCAGTGACCTGGAGGGAG...AGATGTTGAATATGTGTTACCAAGATACAGCACAGGTTCAGGGAAAAGAGTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CCA 90 bp TCTCCACCTGCACCTAAACTGATTGTTTGGTTTCCAGGAATCCTCCCTCCAGGTAAAAAGCTTCTACGTTaGTGGTTAAAACTGCCACTT +
Preference number: 4 (lower is better)
Translates to: SPPAPKLIVWFPGILPPGKKLLR*WLKLPL
Trigger: AAGTGGCAGTTTTAACCACCAACGTAGAAGCTTTTT...ACCTGGAGGGAGGATTCCTGGAAACCAAACAATCAGTTTAGGTGCAGGTGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
3UTR CAA 72 bp AGTAGCGAACTCTTTTCCCTGAACCTGTGCTGTATCTaGGTAACACATATTCAACATCTCCACCTGCACCTA +
Preference number: 4 (lower is better)
Translates to: SSELFSLNLCCI*VTHIQHLHLHL
Trigger: TAGGTGCAGGTGGAGATGTTGAATATGTGTTACCAAGATACAGCACAGGTTCAGGGAAAAGAGTTCGCTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR TCA 90 bp ATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATGACATTAGGTCTGCGGGGATGTaGGAGCTTCATACTCATTCC +
Preference number: 4 (lower is better)
Translates to: IWSNIILSVPVRVFLNDIRSAGM*ELHTHS
Trigger: GGAATGAGTATGAAGCTCTCACATCCCCGCAGACCT...AATGTCATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR TCA 90 bp ATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATGACATTGGGGCCATAACTTCTTaGCTAAAGCTTGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: IWSNIILSVPVRVFLNDIGAITS*LKLEGR
Trigger: CCTGCCCTCAAGCTTTAGTCAAGAAGTTATGGCCCC...AATGTCATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR TCA 90 bp ACTGTGATAGTTAATCTTATGTATCCACTTAACTGGGTCACAAGATGCCCAGCTAGGGCAACATACAGCTaGGTTCTCTGCAACTGTGTT +
Preference number: 4 (lower is better)
Translates to: TVIVNLMYPLNWVTRCPARATYS*VLCNCV
Trigger: AACACAGTTGCAGAGAACTCAGCTGTATGTTGCCCT...AGCTGGGCATCTTGTGACCCAGTTAAGTGGATACATAAGATTAACTATCACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR TCA 90 bp ATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATGACATTCTAGCTGGACCTCTCTaGATCTCAGAAAGGGTTGGC +
Preference number: 4 (lower is better)
Translates to: IWSNIILSVPVRVFLNDILAGPL*ISERVG
Trigger: GCCAACCCTTTCTGAGATTCAGAGAGGTCCAGCTAG...AATGTCATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR TCA 90 bp ACTGTGATAGTTAATCTTATGTATCCACTTAACTGGGTCACAAGATGCCCAGCTGCCAGATCGCATATATaGTGTGACTTGAAAGCGACG +
Preference number: 4 (lower is better)
Translates to: TVIVNLMYPLNWVTRCPAARSHI*CDLKAT
Trigger: CGTCGCTTTCAAGTCACATCATATATGCGATCTGGC...AGCTGGGCATCTTGTGACCCAGTTAAGTGGATACATAAGATTAACTATCACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR GCA 90 bp ATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATGACATTCGCACGTCAAGGATCTaGAGAGTGACACTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: IWSNIILSVPVRVFLNDIRTSRI*RVTLPS
Trigger: AGAGGGAAGTGTCACTCTGCAGATCCTTGACGTGCG...AATGTCATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR GCA 90 bp ATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATGACATTGATGAGTTTGGGATGTaGTGTGTCTGGGTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: IWSNIILSVPVRVFLNDIDEFGM*CVWVQG
Trigger: ACCCTGGACCCAGACACAGCACATCCCAAACTCATC...AATGTCATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR GCA 90 bp CAATACACACCCAAAAATCAAGGTCATTATTTCATCCTCACACCTAGTCTACCAGGCAAAGCTGGAGTTTaGAAGCTGGGAACACTCCTT +
Preference number: 4 (lower is better)
Translates to: QYTPKNQGHYFILTPSLPGKAGV*KLGTLL
Trigger: AAGGAGTGTTCCCAGCTTGCAAACTCCAGCTTTGCC...TGGTAGACTAGGTGTGAGGATGAAATAATGACCTTGATTTTTGGGTGTGTATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CCA 90 bp CCAGCTATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATATCAGATCTTCATCCTaGTCCTTCCCATCCCGGAAT +
Preference number: 4 (lower is better)
Translates to: PAIWSNIILSVPVRVFLNIRSSS*SFPSRN
Trigger: ATTCCGGGATGGGAAGGACCAGGATGAAGATCTGAT...ATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAATAGCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CCA 90 bp ATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATGACATTGTGACACTTCCCTCTTaGGCATCTCTCACTAGCACC +
Preference number: 4 (lower is better)
Translates to: IWSNIILSVPVRVFLNDIVTLPS*ASLTST
Trigger: GGTGCTAGTGAGAGATGCCCAAGAGGGAAGTGTCAC...AATGTCATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CCA 90 bp CATCAGCTCTCATGGGACTCCATCTTGCTGACTTATCCTGCAGATCTTGGGATTAGATGCCCAGCTATTTaGTCAAACATTATTCTGAGT +
Preference number: 4 (lower is better)
Translates to: HQLSWDSILLTYPADLGIRCPAI*SNIILS
Trigger: ACTCAGAATAATGTTTGACCAAATAGCTGGGCATCT...AATCCCAAGATCTGCAGGATAAGTCAGCAAGATGGAGTCCCATGAGAGCTGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CCA 90 bp CAATACACACCCAAAAATCAAGGTCATTATTTCATCCTCACACCTAGTCTACCATCTCACAGGCAAAGCTaGAGTTTGCAAGCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: QYTPKNQGHYFILTPSLPSHRQS*SLQAGN
Trigger: GTTCCCAGCTTGCAAACTCCAGCTTTGCCTGTGAGA...TGGTAGACTAGGTGTGAGGATGAAATAATGACCTTGATTTTTGGGTGTGTATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR TCA 90 bp ACTGTGATAGTTAATCTTATGTATCCACTTAACTGGGTCACAAGATGCCCAGCTCAGAGCCTAGGATGCTaGCAACGAAATCAAATCTCT +
Preference number: 4 (lower is better)
Translates to: TVIVNLMYPLNWVTRCPAQSLGC*QRNQIS
Trigger: AGAGATTTGATTTCGTTGTCAGCATCCTAGGCTCTG...AGCTGGGCATCTTGTGACCCAGTTAAGTGGATACATAAGATTAACTATCACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR TCA 90 bp CCAGCTATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATCAGAGCCTAGGATGCTaGCAACGAAATCAAATCTCT +
Preference number: 4 (lower is better)
Translates to: PAIWSNIILSVPVRVFLNQSLGC*QRNQIS
Trigger: AGAGATTTGATTTCGTTGTCAGCATCCTAGGCTCTG...ATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAATAGCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR TCA 90 bp CGAACTCTTTTCCCTGAACCTGTGCTGTATCTTGGTAACACATATTCAACATCTATCGCATATATGATGTaGCTTGAAAGCGACGAGGCT +
Preference number: 4 (lower is better)
Translates to: RTLFPEPVLYLGNTYSTSIAYMM*LESDEA
Trigger: AGCCTCGTCGCTTTCAAGTCACATCATATATGCGAT...AGATGTTGAATATGTGTTACCAAGATACAGCACAGGTTCAGGGAAAAGAGTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR GCA 90 bp ACTGTGATAGTTAATCTTATGTATCCACTTAACTGGGTCACAAGATGCCCAGCTAAGCGACGAGGCTTCTaGAATACACACCCAAAAATC +
Preference number: 4 (lower is better)
Translates to: TVIVNLMYPLNWVTRCPAKRRGF*NTHPKI
Trigger: GATTTTTGGGTGTGTATTGCAGAAGCCTCGTCGCTT...AGCTGGGCATCTTGTGACCCAGTTAAGTGGATACATAAGATTAACTATCACAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CCA 90 bp CAATACACACCCAAAAATCAAGGTCATTATTTCATCCTCACACCTAGTCTACCAACGAAATCAAATCTCTaGGGGTTGTCAGGTACAGGC +
Preference number: 4 (lower is better)
Translates to: QYTPKNQGHYFILTPSLPTKSNL*GLSGTG
Trigger: GCCTGTACCTGACAACCCCCAGAGATTTGATTTCGT...TGGTAGACTAGGTGTGAGGATGAAATAATGACCTTGATTTTTGGGTGTGTATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CCA 90 bp CGAACTCTTTTCCCTGAACCTGTGCTGTATCTTGGTAACACATATTCAACATCTGCCACTTTTTCTAGCTaGACCTCTCTGAATCTCAGA +
Preference number: 4 (lower is better)
Translates to: RTLFPEPVLYLGNTYSTSATFSS*TSLNLR
Trigger: TCTGAGATTCAGAGAGGTCCAGCTAGAAAAAGTGGC...AGATGTTGAATATGTGTTACCAAGATACAGCACAGGTTCAGGGAAAAGAGTTCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CCA 90 bp CAATACACACCCAAAAATCAAGGTCATTATTTCATCCTCACACCTAGTCTACCACTGCCTAATAGCCTTTaGACAGGACCATCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: QYTPKNQGHYFILTPSLPLPNSL*TGPSAF
Trigger: AAAAGCTGATGGTCCTGTCCAAAGGCTATTAGGCAG...TGGTAGACTAGGTGTGAGGATGAAATAATGACCTTGATTTTTGGGTGTGTATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR TCA 90 bp ATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATGACATTCACTCCGGAGTTTCTTaGCAGCTTTATGGAGTTTTC +
Preference number: 4 (lower is better)
Translates to: IWSNIILSVPVRVFLNDIHSGVS*QLYGVF
Trigger: GAAAACTCCATAAAGCTGTCAAGAAACTCCGGAGTG...AATGTCATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR TCA 90 bp CCAGCTATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATGTTGGCACAACAGATTaGTTCATAAGACAGTCACAA +
Preference number: 4 (lower is better)
Translates to: PAIWSNIILSVPVRVFLNVGTTD*FIRQSQ
Trigger: TTGTGACTGTCTTATGAATCAATCTGTTGTGCCAAC...ATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAATAGCTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR TCA 90 bp ACTGTGATAGTTAATCTTATGTATCCACTTAACTGGGTCACAAGATGCCCAGCTCTAACGGAGAACTTCTaGCAAACAGAAAGATACAGT +
Preference number: 4 (lower is better)
Translates to: TVIVNLMYPLNWVTRCPALTENF*QTERYS
Trigger: ACTGTATCTTTCTGTTTGTCAGAAGTTCTCCGTTAG...AGCTGGGCATCTTGTGACCCAGTTAAGTGGATACATAAGATTAACTATCACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR GCA 90 bp ACTGTGATAGTTAATCTTATGTATCCACTTAACTGGGTCACAAGATGCCCAGCTTTTTCCCTGAACCTGTaGTGTATCTTGGTAACACAT +
Preference number: 4 (lower is better)
Translates to: TVIVNLMYPLNWVTRCPAFSLNL*CILVTH
Trigger: ATGTGTTACCAAGATACAGCACAGGTTCAGGGAAAA...AGCTGGGCATCTTGTGACCCAGTTAAGTGGATACATAAGATTAACTATCACAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR GCA 90 bp CAATACACACCCAAAAATCAAGGTCATTATTTCATCCTCACACCTAGTCTACCACTTGCTGACTTATCCTaGAGATCTTGGGATTTAACC +
Preference number: 4 (lower is better)
Translates to: QYTPKNQGHYFILTPSLPLADLS*RSWDLT
Trigger: GGTTAAATCCCAAGATCTGCAGGATAAGTCAGCAAG...TGGTAGACTAGGTGTGAGGATGAAATAATGACCTTGATTTTTGGGTGTGTATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CCA 90 bp CGAACTCTTTTCCCTGAACCTGTGCTGTATCTTGGTAACACATATTCAACATCTGTGAAAGTAAAGATGTaGGACTTGTTGGTCACATTG +
Preference number: 4 (lower is better)
Translates to: RTLFPEPVLYLGNTYSTSVKVKM*DLLVTL
Trigger: CAATGTGACCAACAAGTCCCACATCTTTACTTTCAC...AGATGTTGAATATGTGTTACCAAGATACAGCACAGGTTCAGGGAAAAGAGTTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CCA 90 bp ATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATGACATTAAAAGGGTCTGGATTTaGGTTAAGGTGAAGAGACGT +
Preference number: 4 (lower is better)
Translates to: IWSNIILSVPVRVFLNDIKRVWI*VKVKRR
Trigger: ACGTCTCTTCACCTTAACCCAAATCCAGACCCTTTT...AATGTCATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CCA 90 bp ATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATGACATTAACCACAAAAGGGTCTaGATTTGGGTTAAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: IWSNIILSVPVRVFLNDINHKRV*IWVKVK
Trigger: CTTCACCTTAACCCAAATCCAGACCCTTTTGTGGTT...AATGTCATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CCA 90 bp ATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATGACATTCTTCTAAATAACCCCTaGAGTAGCGAACTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: IWSNIILSVPVRVFLNDILLNNP*SSELFS
Trigger: GGAAAAGAGTTCGCTACTCCAGGGGTTATTTAGAAG...AATGTCATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CCA 90 bp ACTGTGATAGTTAATCTTATGTATCCACTTAACTGGGTCACAAGATGCCCAGCTAAGCTTCTACGTTGGTaGTTAAAACTGCCACTTTTT +
Preference number: 4 (lower is better)
Translates to: TVIVNLMYPLNWVTRCPAKLLRW*LKLPLF
Trigger: AAAAAGTGGCAGTTTTAACCACCAACGTAGAAGCTT...AGCTGGGCATCTTGTGACCCAGTTAAGTGGATACATAAGATTAACTATCACAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CCA 90 bp ACTGTGATAGTTAATCTTATGTATCCACTTAACTGGGTCACAAGATGCCCAGCTAAAAAGCTTCTACGTTaGTGGTTAAAACTGCCACTT +
Preference number: 4 (lower is better)
Translates to: TVIVNLMYPLNWVTRCPAKKLLR*WLKLPL
Trigger: AAGTGGCAGTTTTAACCACCAACGTAGAAGCTTTTT...AGCTGGGCATCTTGTGACCCAGTTAAGTGGATACATAAGATTAACTATCACAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR TCA 90 bp CAATACACACCCAAAAATCAAGGTCATTATTTCATCCTCACACCTAGTCTACCATACCAACTTCCTATTTaGAATCAATACTCTCCAACC +
Preference number: 4 (lower is better)
Translates to: QYTPKNQGHYFILTPSLPYQLPI*NQYSPT
Trigger: GGTTGGAGAGTATTGATTTCAAATAGGAAGTTGGTA...TGGTAGACTAGGTGTGAGGATGAAATAATGACCTTGATTTTTGGGTGTGTATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR TCA 90 bp ATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATGACATTTTCTCTGGAAAACCTTaGCTAATACAGGAACTAACG +
Preference number: 4 (lower is better)
Translates to: IWSNIILSVPVRVFLNDIFSGKP*LIQELT
Trigger: CGTTAGTTCCTGTATTAGTCAAGGTTTTCCAGAGAA...AATGTCATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR GCA 90 bp ATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATGACATTTTTTCCCTGAACCTGTaGTGTATCTTGGTAACACAT +
Preference number: 4 (lower is better)
Translates to: IWSNIILSVPVRVFLNDIFSLNL*CILVTH
Trigger: ATGTGTTACCAAGATACAGCACAGGTTCAGGGAAAA...AATGTCATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAAT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CCA 90 bp ATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATGACATTGTGAAAGTAAAGATGTaGGACTTGTTGGTCACATTG +
Preference number: 4 (lower is better)
Translates to: IWSNIILSVPVRVFLNDIVKVKM*DLLVTL
Trigger: CAATGTGACCAACAAGTCCCACATCTTTACTTTCAC...AATGTCATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CCA 90 bp CAATACACACCCAAAAATCAAGGTCATTATTTCATCCTCACACCTAGTCTACCAAAGCTTCTACGTTGGTaGTTAAAACTGCCACTTTTT +
Preference number: 4 (lower is better)
Translates to: QYTPKNQGHYFILTPSLPKLLRW*LKLPLF
Trigger: AAAAAGTGGCAGTTTTAACCACCAACGTAGAAGCTT...TGGTAGACTAGGTGTGAGGATGAAATAATGACCTTGATTTTTGGGTGTGTATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR TCA 90 bp ATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATGACATTAAAGTTCATATTTTATaGAATATGAGAGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: IWSNIILSVPVRVFLNDIKVHIL*NMRGQG
Trigger: GCCCTGGCCTCTCATATTTCATAAAATATGAACTTT...AATGTCATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372514.7
CDS CCA 90 bp TCCCGGAGGCGTTGTCTGCGACTCGGCGGAGGCTCCAACTTCCAGTaGCCCGGTCGGGAAAGGTACAGACTCCCAAGCCTCTTGGTCGGC +
Preference number: 5 (lower is better)
Translates to: SRRRCLRLGGGSNFQ*PGRERYRLPSLLVG
Trigger: GCCGACCAAGAGGCTTGGGAGTCTGTACCTTTCCCGACCGGGCCACTGGAAGTTGGAGCCTCCGCCGAGTCGCAGACAACGCCTCCGGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000372517.8
ENST00000487556.6
ENST00000642150.1
ENST00000643061.1
ENST00000645239.1
ENST00000647120.1
CDS CCA 90 bp GAGAGAGGGCAGAGCAGCTCGGCTGTGCCCCCTAGTAGGGCCACGTaGAACTTGCCGGCATCCCCTGCGTGGCCTGACACATGCACAGAC +
Preference number: 5 (lower is better)
Translates to: ERGQSSSAVPPSRAT*NLPASPAWPDTCTD
Trigger: GTCTGTGCATGTGTCAGGCCACGCAGGGGATGCCGGCAAGTTCCACGTGGCCCTACTAGGGGGCACAGCCGAGCTGCTCTGCCCTCTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372514.7
ENST00000372517.8
ENST00000642150.1
CDS GCA 90 bp GGCGTGACAGAGGGTATAACCCAGGAGCCGAGGCCGAGACGGTATTaGTGGTGCTCTGGGATCACAAAGGCCGGGGCTCCAATCCCAGCT +
Preference number: 5 (lower is better)
Translates to: GVTEGITQEPRPRRY*WCSGITKAGAPIPA
Trigger: AGCTGGGATTGGAGCCCCGGCCTTTGTGATCCCAGAGCACCAGCAATACCGTCTCGGCCTCGGCTCCTGGGTTATACCCTCTGTCACGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328249.3
CDS CCA 90 bp ACTTCCAGTGGCCCGGTCGGGAAAGGTACAGACTCCCAAGCCTCTTaGTCGGCGGCTCCAGCGACCGCCATTTTCCTCCAGGAGAGGGAA +
Preference number: 5 (lower is better)
Translates to: TSSGPVGKGTDSQAS*SAAPATAIFLQERE
Trigger: TTCCCTCTCCTGGAGGAAAATGGCGGTCGCTGGAGCCGCCGACCAAGAGGCTTGGGAGTCTGTACCTTTCCCGACCGGGCCACTGGAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372517.8
ENST00000487556.6
ENST00000643061.1
ENST00000645239.1
ENST00000647120.1
CDS TCA 90 bp TCCGGCATCAGATCTTCATCCTGGTCCTTCCCATCCCGGAATATGTaGACAGCCTGGGAGCGCTGCGGGAATGGGGACCGCAGCCACCTC +
Preference number: 5 (lower is better)
Translates to: SGIRSSSWSFPSRNM*TAWERCGNGDRSHL
Trigger: GAGGTGGCTGCGGTCCCCATTCCCGCAGCGCTCCCAGGCTGTTCACATATTCCGGGATGGGAAGGACCAGGATGAAGATCTGATGCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328249.3
ENST00000372514.7
ENST00000372517.8
ENST00000642150.1
CDS GCA 90 bp TACTTGTCTCACACCTCACACTCTGTTCCTCCCGGAGGCGTTGTCTaGGACTCGGCGGAGGCTCCAACTTCCAGTGGCCCGGTCGGGAAA +
Preference number: 5 (lower is better)
Translates to: YLSHTSHSVPPGGVV*DSAEAPTSSGPVGK
Trigger: TTTCCCGACCGGGCCACTGGAAGTTGGAGCCTCCGCCGAGTCGCAGACAACGCCTCCGGGAGGAACAGAGTGTGAGGTGTGAGACAAGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487556.6
CDS CCA 90 bp GTGACAGAGGGTATAACCCAGGAGCCGAGGCCGAGACGGTATTGCTaGTGCTCTGGGATCACAAAGGCCGGGGCTCCAATCCCAGCTCTG +
Preference number: 5 (lower is better)
Translates to: VTEGITQEPRPRRYC*CSGITKAGAPIPAL
Trigger: CAGAGCTGGGATTGGAGCCCCGGCCTTTGTGATCCCAGAGCACCAGCAATACCGTCTCGGCCTCGGCTCCTGGGTTATACCCTCTGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328249.3
CDS TCA 90 bp ACAAGGCCAACTGGGAGGGACGGCAGGAGAAAGCTTGGGAAGGGATaGGGAAGAGGATATCCCGGGGACGGACAGAGCCCAGGAAGGACT +
Preference number: 5 (lower is better)
Translates to: TRPTGRDGRRKLGKG*GRGYPGDGQSPGRT
Trigger: AGTCCTTCCTGGGCTCTGTCCGTCCCCGGGATATCCTCTTCCTCATCCCTTCCCAAGCTTTCTCCTGCCGTCCCTCCCAGTTGGCCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328249.3
ENST00000643061.1
CDS GCA 90 bp ACAGAGGGTATAACCCAGGAGCCGAGGCCGAGACGGTATTGCTGGTaGTCTGGGATCACAAAGGCCGGGGCTCCAATCCCAGCTCTGCTA +
Preference number: 5 (lower is better)
Translates to: TEGITQEPRPRRYCW*SGITKAGAPIPALL
Trigger: TAGCAGAGCTGGGATTGGAGCCCCGGCCTTTGTGATCCCAGAGCACCAGCAATACCGTCTCGGCCTCGGCTCCTGGGTTATACCCTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328249.3
CDS GCA 90 bp CACAGGCAAAGCTGGAGTTTGCAAGCTGGGAACACTCCTTCCCCATaGAGAGAGACCAGGGAGCAGGCAAGCGCATCAGGAAGGCCCTCC +
Preference number: 5 (lower is better)
Translates to: HRQSWSLQAGNTPSP*RETREQASASGRPS
Trigger: GGAGGGCCTTCCTGATGCGCTTGCCTGCTCCCTGGTCTCTCTGCATGGGGAAGGAGTGTTCCCAGCTTGCAAACTCCAGCTTTGCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372517.8
ENST00000643061.1
ENST00000647120.1
CDS-3UTR CAA 90 bp AGACTGAGTAATGCAGACTGTCCTCCCAAATGTGGGCGGGCCTTGCTGAATCAGAGCCACCTCACCTCCTaGGGTACCGTCCCGGGCCAG +
Preference number: 5 (lower is better)
Translates to: RLSNADCPPKCGRALLNQSHLTS*GTVPGQ
Trigger: CTGGCCCGGGACGGTACCCAAGGAGGTGAGGTGGCT...CTGATTCAGCAAGGCCCGCCCACATTTGGGAGGACAGTCTGCATTACTCAGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS GCA 90 bp CACAGGCAAAGCTGGAGTTTGCAAGCTGGGAACACTCCTTCCCCATaGAGAGAGACCAGGGAGCAGGCAAGCGCATCAGGAAGGCCTAGG +
Preference number: 5 (lower is better)
Translates to: HRQSWSLQAGNTPSP*RETREQASASGRPR
Trigger: CCTAGGCCTTCCTGATGCGCTTGCCTGCTCCCTGGTCTCTCTGCATGGGGAAGGAGTGTTCCCAGCTTGCAAACTCCAGCTTTGCCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372514.7
CDS GCA 90 bp CACAGGCAAAGCTGGAGTTTGCAAGCTGGGAACACTCCTTCCCCATaGAGAGAGACCAGGGAGCAGGCAAGCGCATCAGGAAGGCCTGGA +
Preference number: 5 (lower is better)
Translates to: HRQSWSLQAGNTPSP*RETREQASASGRPG
Trigger: TCCAGGCCTTCCTGATGCGCTTGCCTGCTCCCTGGTCTCTCTGCATGGGGAAGGAGTGTTCCCAGCTTGCAAACTCCAGCTTTGCCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645239.1
CDS GCA 90 bp CACAGGCAAAGCTGGAGTTTGCAAGCTGGGAACACTCCTTCCCCATaGAGAGAGACCAGGGAGCAGGCAAGCGCATCAGGAAGGCCTTCA +
Preference number: 5 (lower is better)
Translates to: HRQSWSLQAGNTPSP*RETREQASASGRPS
Trigger: TGAAGGCCTTCCTGATGCGCTTGCCTGCTCCCTGGTCTCTCTGCATGGGGAAGGAGTGTTCCCAGCTTGCAAACTCCAGCTTTGCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470938.1
ENST00000487556.6
CDS-3UTR CAA 90 bp TCTCCACCTGCACCTAAACTGATTGTTTGGTTTCCAGGAATCCTCCCTCCAGGTAGCCACCTCACCTCCTaGGGTACCGTCCCGGGCCAG +
Preference number: 5 (lower is better)
Translates to: SPPAPKLIVWFPGILPPGSHLTS*GTVPGQ
Trigger: CTGGCCCGGGACGGTACCCAAGGAGGTGAGGTGGCT...ACCTGGAGGGAGGATTCCTGGAAACCAAACAATCAGTTTAGGTGCAGGTGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CAA 90 bp AATAACCCCTGGAGTAGCGAACTCTTTTCCCTGAACCTGTGCTGTATCTTGGTAGCCCTCCCGGAGGCGTaGTCTGCGACTCGGCGGAGG +
Preference number: 5 (lower is better)
Translates to: NNPWSSELFSLNLCCILVALPEA*SATRRR
Trigger: CCTCCGCCGAGTCGCAGACAACGCCTCCGGGAGGGC...TACCAAGATACAGCACAGGTTCAGGGAAAAGAGTTCGCTACTCCAGGGGTTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372517.8
CDS CCA 90 bp GGCACCTTCTGGATCAGGGACGCTTGTTCCTCTCACAGGCAAAGCTaGAGTTTGCAAGCTGGGAACACTCCTTCCCCATGCAGAGAGACC +
Preference number: 5 (lower is better)
Translates to: GTFWIRDACSSHRQS*SLQAGNTPSPCRET
Trigger: GGTCTCTCTGCATGGGGAAGGAGTGTTCCCAGCTTGCAAACTCCAGCTTTGCCTGTGAGAGGAACAAGCGTCCCTGATCCAGAAGGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487556.6
ENST00000647120.1
CDS CCA 90 bp AACACCTTCTGGATCAGGGACGCTTGTTCCTCTCACAGGCAAAGCTaGAGTTTGCAAGCTGGGAACACTCCCTCCCGGAGGCGTTGTCTG +
Preference number: 5 (lower is better)
Translates to: NTFWIRDACSSHRQS*SLQAGNTPSRRRCL
Trigger: CAGACAACGCCTCCGGGAGGGAGTGTTCCCAGCTTGCAAACTCCAGCTTTGCCTGTGAGAGGAACAAGCGTCCCTGATCCAGAAGGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642150.1
CDS-3UTR CAA 90 bp CATCAGCTCTCATGGGACTCCATCTTGCTGACTTATCCTGCAGATCTTGGGATTAGGGCCACGTGGAACTaGCCGGCATCCCCTGCGTGG +
Preference number: 5 (lower is better)
Translates to: HQLSWDSILLTYPADLGIRATWN*PASPAW
Trigger: CCACGCAGGGGATGCCGGCAAGTTCCACGTGGCCCT...AATCCCAAGATCTGCAGGATAAGTCAGCAAGATGGAGTCCCATGAGAGCTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS CCA 90 bp TCCTCAAGGCGCACGTCAAGGATCTGCAGAGTGACACTTCCCTCTTaGGCATCTCTCACTAGCACCGTCCTCCCCTTATATTCCGGCATC +
Preference number: 5 (lower is better)
Translates to: SSRRTSRICRVTLPS*ASLTSTVLPLYSGI
Trigger: GATGCCGGAATATAAGGGGAGGACGGTGCTAGTGAGAGATGCCCAAGAGGGAAGTGTCACTCTGCAGATCCTTGACGTGCGCCTTGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328249.3
ENST00000372514.7
ENST00000372517.8
ENST00000642150.1
CDS CCA 90 bp ACCACCTTCTGGATCAGGGACGCTTGTTCCTCTCACAGGCAAAGCTaGAGTTTGCAAGCTGGGAACACTCCTTCCCCATGCAGAGAGACC +
Preference number: 5 (lower is better)
Translates to: TTFWIRDACSSHRQS*SLQAGNTPSPCRET
Trigger: GGTCTCTCTGCATGGGGAAGGAGTGTTCCCAGCTTGCAAACTCCAGCTTTGCCTGTGAGAGGAACAAGCGTCCCTGATCCAGAAGGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470938.1
CDS CCA 90 bp CCGAACTTCTGGATCAGGGACGCTTGTTCCTCTCACAGGCAAAGCTaGAGTTTGCAAGCTGGGAACACTCCTTCCCCATGCAGAGAGACC +
Preference number: 5 (lower is better)
Translates to: PNFWIRDACSSHRQS*SLQAGNTPSPCRET
Trigger: GGTCTCTCTGCATGGGGAAGGAGTGTTCCCAGCTTGCAAACTCCAGCTTTGCCTGTGAGAGGAACAAGCGTCCCTGATCCAGAAGTTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645239.1
CDS TCA 90 bp GAGAGACCAGGGAGCAGGCAAGCGCATCAGGAAGGCCTTCAGCTCTaGGCTGTATTCGACATGATTCCTCTGAGTGTTCCCAATGGGAGT +
Preference number: 5 (lower is better)
Translates to: ERPGSRQAHQEGLQL*AVFDMIPLSVPNGS
Trigger: ACTCCCATTGGGAACACTCAGAGGAATCATGTCGAATACAGCTCAGAGCTGAAGGCCTTCCTGATGCGCTTGCCTGCTCCCTGGTCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470938.1
ENST00000487556.6
CDS CCA 90 bp AACACCTTCTGGATCAGGGACGCTTGTTCCTCTCACAGGCAAAGCTaGAGTTTGCAAGCTGGGAACACTCCTTCCCCATGCAGAGAGACC +
Preference number: 5 (lower is better)
Translates to: NTFWIRDACSSHRQS*SLQAGNTPSPCRET
Trigger: GGTCTCTCTGCATGGGGAAGGAGTGTTCCCAGCTTGCAAACTCCAGCTTTGCCTGTGAGAGGAACAAGCGTCCCTGATCCAGAAGGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372514.7
ENST00000372517.8
ENST00000643061.1
CDS-3UTR CAA 90 bp AGACTGAGTAATGCAGACTGTCCTCCCAAATGTGGGCGGGCCTTGCTGAATCAGTCAAATCTCTGGGGGTaGTCAGGTACAGGCTGCCGT +
Preference number: 5 (lower is better)
Translates to: RLSNADCPPKCGRALLNQSNLWG*SGTGCR
Trigger: ACGGCAGCCTGTACCTGACAACCCCCAGAGATTTGA...CTGATTCAGCAAGGCCCGCCCACATTTGGGAGGACAGTCTGCATTACTCAGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS CCA 90 bp GAGAGACCAGGGAGCAGGCAAGCGCATCAGGAAGGCCTAGGGATGTaGGCCGGGAAAAGTTCATATTTTATGAAATATGAGAGGCCAGGG +
Preference number: 5 (lower is better)
Translates to: ERPGSRQAHQEGLGM*AGKSSYFMKYERPG
Trigger: CCCTGGCCTCTCATATTTCATAAAATATGAACTTTTCCCGGCCCACATCCCTAGGCCTTCCTGATGCGCTTGCCTGCTCCCTGGTCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372514.7
CDS-3UTR CAA 90 bp TCTCCACCTGCACCTAAACTGATTGTTTGGTTTCCAGGAATCCTCCCTCCAGGTACATCGGTAAGACCCTaGGTCCTCAAGGCGCACGTC +
Preference number: 5 (lower is better)
Translates to: SPPAPKLIVWFPGILPPGTSVRP*VLKAHV
Trigger: GACGTGCGCCTTGAGGACCAAGGGTCTTACCGATGT...ACCTGGAGGGAGGATTCCTGGAAACCAAACAATCAGTTTAGGTGCAGGTGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CAA 90 bp AGACTGAGTAATGCAGACTGTCCTCCCAAATGTGGGCGGGCCTTGCTGAATCAGAGGCAAAGCTGGAGTTaGCAAGCTGGGAACACTCCT +
Preference number: 5 (lower is better)
Translates to: RLSNADCPPKCGRALLNQRQSWS*QAGNTP
Trigger: AGGAGTGTTCCCAGCTTGCAAACTCCAGCTTTGCCT...CTGATTCAGCAAGGCCCGCCCACATTTGGGAGGACAGTCTGCATTACTCAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS TCA 90 bp ATATCACATGTACCAGGCAGGGAAAGAGGATCAGAAACTCCTACCTaGCACATGCACAGACAGCCGGAGGAAGACGAGAGGGATGAGGCA +
Preference number: 5 (lower is better)
Translates to: ISHVPGRERGSETPT*HMHRQPEEDERDEA
Trigger: TGCCTCATCCCTCTCGTCTTCCTCCGGCTGTCTGTGCATGTGTCAGGTAGGAGTTTCTGATCCTCTTTCCCTGCCTGGTACATGTGATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328249.3
ENST00000643061.1
CDS TCA 90 bp GTCCAGGGTCACTGCCACAAAATGCAACCGGGCTCTTCTCCAGCCTaGGTTTGCTGCAGCTCTTTTCAACTTCAGTTCACTCCGGAGTTT +
Preference number: 5 (lower is better)
Translates to: VQGHCHKMQPGSSPA*VCCSSFQLQFTPEF
Trigger: AAACTCCGGAGTGAACTGAAGTTGAAAAGAGCTGCAGCAAACTCAGGCTGGAGAAGAGCCCGGTTGCATTTTGTGGCAGTGACCCTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000328249.3
ENST00000372514.7
ENST00000372517.8
ENST00000487556.6
CDS-3UTR CAA 90 bp TCTCCACCTGCACCTAAACTGATTGTTTGGTTTCCAGGAATCCTCCCTCCAGGTTCCATAATCATGGGGTaGGGCCAGGCGACTGAAGTC +
Preference number: 5 (lower is better)
Translates to: SPPAPKLIVWFPGILPPGSIIMG*GQATEV
Trigger: GACTTCAGTCGCCTGGCCCAACCCCATGATTATGGA...ACCTGGAGGGAGGATTCCTGGAAACCAAACAATCAGTTTAGGTGCAGGTGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS GCA 90 bp GCCAGGCTTGGGAAATGCCTGTTTCAAGCCAATCTTTGCCCAAGATaGAGCCTGGAGGTTTCCCTGACAGCCTTTTCCAGTTTGACTCTT +
Preference number: 5 (lower is better)
Translates to: ARLGKCLFQANLCPR*SLEVSLTAFSSLTL
Trigger: AAGAGTCAAACTGGAAAAGGCTGTCAGGGAAACCTCCAGGCTGCATCTTGGGCAAAGATTGGCTTGAAACAGGCATTTCCCAAGCCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328249.3
CDS CCA 90 bp GTGAAGTACTCAGAGCCTAGGATGCTGACAACGAAATCAAATCTCTaGGGGTTGTCAGGTACAGGCTGCCGTCTGTCTCCAAGCCTTACA +
Preference number: 5 (lower is better)
Translates to: VKYSEPRMLTTKSNL*GLSGTGCRLSPSLT
Trigger: TGTAAGGCTTGGAGACAGACGGCAGCCTGTACCTGACAACCCCCAGAGATTTGATTTCGTTGTCAGCATCCTAGGCTCTGAGTACTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328249.3
ENST00000372514.7
ENST00000372517.8
ENST00000487556.6
CDS-3UTR CAA 90 bp AATAACCCCTGGAGTAGCGAACTCTTTTCCCTGAACCTGTGCTGTATCTTGGTAACATCGGTAAGACCCTaGGTCCTCAAGGCGCACGTC +
Preference number: 5 (lower is better)
Translates to: NNPWSSELFSLNLCCILVTSVRP*VLKAHV
Trigger: GACGTGCGCCTTGAGGACCAAGGGTCTTACCGATGT...TACCAAGATACAGCACAGGTTCAGGGAAAAGAGTTCGCTACTCCAGGGGTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CAA 90 bp CATCAGCTCTCATGGGACTCCATCTTGCTGACTTATCCTGCAGATCTTGGGATTTCAAATCTCTGGGGGTaGTCAGGTACAGGCTGCCGT +
Preference number: 5 (lower is better)
Translates to: HQLSWDSILLTYPADLGISNLWG*SGTGCR
Trigger: ACGGCAGCCTGTACCTGACAACCCCCAGAGATTTGA...AATCCCAAGATCTGCAGGATAAGTCAGCAAGATGGAGTCCCATGAGAGCTGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CAA 90 bp AGACTGAGTAATGCAGACTGTCCTCCCAAATGTGGGCGGGCCTTGCTGAATCAGAGGGGGCCAGAGAAATaGTGGGTGAAAGTAAAGATG +
Preference number: 5 (lower is better)
Translates to: RLSNADCPPKCGRALLNQRGPEK*WVKVKM
Trigger: CATCTTTACTTTCACCCACAATTTCTCTGGCCCCCT...CTGATTCAGCAAGGCCCGCCCACATTTGGGAGGACAGTCTGCATTACTCAGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CAA 90 bp AGACTGAGTAATGCAGACTGTCCTCCCAAATGTGGGCGGGCCTTGCTGAATCAGTCATGGGACTCCATCTaGCTGACTTATCCTGCAGAT +
Preference number: 5 (lower is better)
Translates to: RLSNADCPPKCGRALLNQSWDSI*LTYPAD
Trigger: ATCTGCAGGATAAGTCAGCAAGATGGAGTCCCATGA...CTGATTCAGCAAGGCCCGCCCACATTTGGGAGGACAGTCTGCATTACTCAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CAA 90 bp CCAGCTATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATAGACTCCCAAGCCTCTaGGTCGGCGGCTCCAGCGAC +
Preference number: 5 (lower is better)
Translates to: PAIWSNIILSVPVRVFLNRLPSL*VGGSSD
Trigger: GTCGCTGGAGCCGCCGACCAAGAGGCTTGGGAGTCT...ATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAATAGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372517.8
CDS TCA 90 bp ACAAAGGCCGGGGCTCCAATCCCAGCTCTGCTACTTACCTCCTTGTaGTACTGTGACCGAACTTCTCTGAGACTGTGTTTCTTCATCTTC +
Preference number: 5 (lower is better)
Translates to: TKAGAPIPALLLTSL*YCDRTSLRLCFFIF
Trigger: GAAGATGAAGAAACACAGTCTCAGAGAAGTTCGGTCACAGTATCACAAGGAGGTAAGTAGCAGAGCTGGGATTGGAGCCCCGGCCTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328249.3
CDS GCA 90 bp ATGCTGACAACGAAATCAAATCTCTGGGGGTTGTCAGGTACAGGCTaGCGTCTGTCTCCAAGCCTTACACATCTTTGGTCCTCAGAAAGG +
Preference number: 5 (lower is better)
Translates to: MLTTKSNLWGLSGTG*RLSPSLTHLWSSER
Trigger: CCTTTCTGAGGACCAAAGATGTGTAAGGCTTGGAGACAGACGGCAGCCTGTACCTGACAACCCCCAGAGATTTGATTTCGTTGTCAGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328249.3
ENST00000372514.7
ENST00000372517.8
ENST00000487556.6
CDS-3UTR CAA 90 bp AATAACCCCTGGAGTAGCGAACTCTTTTCCCTGAACCTGTGCTGTATCTTGGTACTGGATCAGGGACGCTaGTTCCTCTCACAGGCAAAG +
Preference number: 5 (lower is better)
Translates to: NNPWSSELFSLNLCCILVLDQGR*FLSQAK
Trigger: CTTTGCCTGTGAGAGGAACAAGCGTCCCTGATCCAG...TACCAAGATACAGCACAGGTTCAGGGAAAAGAGTTCGCTACTCCAGGGGTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS TCA 90 bp CGGGGCTCCAATCCCAGCTCTGCTACTTACCTCCTTGTGATACTGTaGCCGAACTTCTCTGAGACTGTGTTTCTTCATCTTCAAAATGGG +
Preference number: 5 (lower is better)
Translates to: RGSNPSSATYLLVIL*PNFSETVFLHLQNG
Trigger: CCCATTTTGAAGATGAAGAAACACAGTCTCAGAGAAGTTCGGTCACAGTATCACAAGGAGGTAAGTAGCAGAGCTGGGATTGGAGCCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328249.3
CDS CCA 90 bp GGGATTATGGTGAGGGTTGAAAGAGGTAAATGCTCACACAGAGGCTaGCGTGTTAAGTCTCTAAATGCCGTGAGTGAGGATGTCAGTGCA +
Preference number: 5 (lower is better)
Translates to: GIMVRVERGKCSHRG*RVKSLNAVSEDVSA
Trigger: TGCACTGACATCCTCACTCACGGCATTTAGAGACTTAACACGCCAGCCTCTGTGTGAGCATTTACCTCTTTCAACCCTCACCATAATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328249.3
CDS GCA 90 bp TTAATAAGGATCCTGTCCTCCTGGACCCCATCTAAGGAAATGTCATaGCTGGGTGATAAAAGGGACTTCCAGATGGCTTCACCTATGGGA +
Preference number: 5 (lower is better)
Translates to: LIRILSSWTPSKEMS*LGDKRDFQMASPMG
Trigger: TCCCATAGGTGAAGCCATCTGGAAGTCCCTTTTATCACCCAGGCATGACATTTCCTTAGATGGGGTCCAGGAGGACAGGATCCTTATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642150.1
CDS CCA 90 bp CAGAACCCCAAAAGACATAATGTTTCCAGCCAAGCTTCCTTATTCTaGGGACGCCAATATCACATGTACCAGGCAGGGAAAGAGGATCAG +
Preference number: 5 (lower is better)
Translates to: QNPKRHNVSSQASLF*GRQYHMYQAGKEDQ
Trigger: CTGATCCTCTTTCCCTGCCTGGTACATGTGATATTGGCGTCCCCAGAATAAGGAAGCTTGGCTGGAAACATTATGTCTTTTGGGGTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328249.3
ENST00000643061.1
CDS CCA 90 bp GGTAGTAAAGAAGAGTTCACCTTGAGGGACACATCTCCATTAGCATaGCCTTTCCCTTCTGGCCTGGGGACAATTGATTCCTCTGATTTG +
Preference number: 5 (lower is better)
Translates to: GSKEEFTLRDTSPLA*PFPSGLGTIDSSDL
Trigger: CAAATCAGAGGAATCAATTGTCCCCAGGCCAGAAGGGAAAGGCCATGCTAATGGAGATGTGTCCCTCAAGGTGAACTCTTCTTTACTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328249.3
ENST00000372514.7
ENST00000372517.8
ENST00000487556.6
CDS-3UTR CAA 90 bp AGACTGAGTAATGCAGACTGTCCTCCCAAATGTGGGCGGGCCTTGCTGAATCAGAACCTAAGAGGCTGTTaGCTACACAAATACTCAAGT +
Preference number: 5 (lower is better)
Translates to: RLSNADCPPKCGRALLNQNLRGC*LHKYSS
Trigger: ACTTGAGTATTTGTGTAGCAAACAGCCTCTTAGGTT...CTGATTCAGCAAGGCCCGCCCACATTTGGGAGGACAGTCTGCATTACTCAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CAA 90 bp CATCAGCTCTCATGGGACTCCATCTTGCTGACTTATCCTGCAGATCTTGGGATTTCATGGGACTCCATCTaGCTGACTTATCCTGCAGAT +
Preference number: 5 (lower is better)
Translates to: HQLSWDSILLTYPADLGISWDSI*LTYPAD
Trigger: ATCTGCAGGATAAGTCAGCAAGATGGAGTCCCATGA...AATCCCAAGATCTGCAGGATAAGTCAGCAAGATGGAGTCCCATGAGAGCTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CAA 90 bp AATAACCCCTGGAGTAGCGAACTCTTTTCCCTGAACCTGTGCTGTATCTTGGTACTGGCCTGGGGACAATaGATTCCTCTGATTTGTGTA +
Preference number: 5 (lower is better)
Translates to: NNPWSSELFSLNLCCILVLAWGQ*IPLICV
Trigger: TACACAAATCAGAGGAATCAATTGTCCCCAGGCCAG...TACCAAGATACAGCACAGGTTCAGGGAAAAGAGTTCGCTACTCCAGGGGTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS CCA 90 bp AAGTACTGCTCCAGCATATTCAGTTTAATAAGGATCCTGTCCTCCTaGACCCCATCTAAGGAAATGTCATGCCTGGGTGATAAAAGGGAC +
Preference number: 5 (lower is better)
Translates to: KYCSSIFSLIRILSS*TPSKEMSCLGDKRD
Trigger: GTCCCTTTTATCACCCAGGCATGACATTTCCTTAGATGGGGTCCAGGAGGACAGGATCCTTATTAAACTGAATATGCTGGAGCAGTACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642150.1
CDS-3UTR CAA 90 bp CATCAGCTCTCATGGGACTCCATCTTGCTGACTTATCCTGCAGATCTTGGGATTTCACTCCGGAGTTTCTaGACAGCTTTATGGAGTTTT +
Preference number: 5 (lower is better)
Translates to: HQLSWDSILLTYPADLGISLRSF*TALWSF
Trigger: AAAACTCCATAAAGCTGTCAAGAAACTCCGGAGTGA...AATCCCAAGATCTGCAGGATAAGTCAGCAAGATGGAGTCCCATGAGAGCTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CAA 90 bp CGAACTCTTTTCCCTGAACCTGTGCTGTATCTTGGTAACACATATTCAACATCTAACATCATCTCTTCCTaGGCGTCAAGCCTGCTGCCA +
Preference number: 5 (lower is better)
Translates to: RTLFPEPVLYLGNTYSTSNIISS*ASSLLP
Trigger: TGGCAGCAGGCTTGACGCCAAGGAAGAGATGATGTT...AGATGTTGAATATGTGTTACCAAGATACAGCACAGGTTCAGGGAAAAGAGTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CAA 90 bp AATAACCCCTGGAGTAGCGAACTCTTTTCCCTGAACCTGTGCTGTATCTTGGTAAAAGAAGAGTTCACCTaGAGGGACACATCTCCATTA +
Preference number: 5 (lower is better)
Translates to: NNPWSSELFSLNLCCILVKEEFT*RDTSPL
Trigger: TAATGGAGATGTGTCCCTCAAGGTGAACTCTTCTTT...TACCAAGATACAGCACAGGTTCAGGGAAAAGAGTTCGCTACTCCAGGGGTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CAA 90 bp TCTCCACCTGCACCTAAACTGATTGTTTGGTTTCCAGGAATCCTCCCTCCAGGTAACCTGTGCTGTATCTaGGTAACACATATTCAACAT +
Preference number: 5 (lower is better)
Translates to: SPPAPKLIVWFPGILPPGNLCCI*VTHIQH
Trigger: ATGTTGAATATGTGTTACCAAGATACAGCACAGGTT...ACCTGGAGGGAGGATTCCTGGAAACCAAACAATCAGTTTAGGTGCAGGTGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CAA 90 bp ATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATGACATTCTGGATCAGGGACGCTaGTTCCTCTCACAGGCAAAG +
Preference number: 5 (lower is better)
Translates to: IWSNIILSVPVRVFLNDILDQGR*FLSQAK
Trigger: CTTTGCCTGTGAGAGGAACAAGCGTCCCTGATCCAG...AATGTCATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS TCA 90 bp CAGCTCTGCTACTTACCTCCTTGTGATACTGTGACCGAACTTCTCTaGGACTGTGTTTCTTCATCTTCAAAATGGGTAAAAGAACTGTGC +
Preference number: 5 (lower is better)
Translates to: QLCYLPPCDTVTELL*DCVSSSSKWVKELC
Trigger: GCACAGTTCTTTTACCCATTTTGAAGATGAAGAAACACAGTCTCAGAGAAGTTCGGTCACAGTATCACAAGGAGGTAAGTAGCAGAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328249.3
CDS-3UTR CAA 90 bp CCAGCTATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATTTCTCCAGCCTGAGTTaGCTGCAGCTCTTTTCAACT +
Preference number: 5 (lower is better)
Translates to: PAIWSNIILSVPVRVFLNFSSLS*LQLFST
Trigger: AGTTGAAAAGAGCTGCAGCAAACTCAGGCTGGAGAA...ATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAATAGCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CAA 90 bp ATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATGACATTAGGCAAAGCTGGAGTTaGCAAGCTGGGAACACTCCT +
Preference number: 5 (lower is better)
Translates to: IWSNIILSVPVRVFLNDIRQSWS*QAGNTP
Trigger: AGGAGTGTTCCCAGCTTGCAAACTCCAGCTTTGCCT...AATGTCATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CAA 90 bp CGAACTCTTTTCCCTGAACCTGTGCTGTATCTTGGTAACACATATTCAACATCTAAGCCTTACACATCTTaGGTCCTCAGAAAGGATGAG +
Preference number: 5 (lower is better)
Translates to: RTLFPEPVLYLGNTYSTSKPYTS*VLRKDE
Trigger: CTCATCCTTTCTGAGGACCAAAGATGTGTAAGGCTT...AGATGTTGAATATGTGTTACCAAGATACAGCACAGGTTCAGGGAAAAGAGTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CAA 90 bp CCAGCTATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATAAGCCTTACACATCTTaGGTCCTCAGAAAGGATGAG +
Preference number: 5 (lower is better)
Translates to: PAIWSNIILSVPVRVFLNKPYTS*VLRKDE
Trigger: CTCATCCTTTCTGAGGACCAAAGATGTGTAAGGCTT...ATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAATAGCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CAA 90 bp CGAACTCTTTTCCCTGAACCTGTGCTGTATCTTGGTAACACATATTCAACATCTACTCCAAGAATCCATTaGGTCTTGTCTCCCACATAC +
Preference number: 5 (lower is better)
Translates to: RTLFPEPVLYLGNTYSTSTPRIH*VLSPTY
Trigger: GTATGTGGGAGACAAGACCAAATGGATTCTTGGAGT...AGATGTTGAATATGTGTTACCAAGATACAGCACAGGTTCAGGGAAAAGAGTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CAA 90 bp AATAACCCCTGGAGTAGCGAACTCTTTTCCCTGAACCTGTGCTGTATCTTGGTAAACCTGTGCTGTATCTaGGTAACACATATTCAACAT +
Preference number: 5 (lower is better)
Translates to: NNPWSSELFSLNLCCILVNLCCI*VTHIQH
Trigger: ATGTTGAATATGTGTTACCAAGATACAGCACAGGTT...TACCAAGATACAGCACAGGTTCAGGGAAAAGAGTTCGCTACTCCAGGGGTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CAA 90 bp AATAACCCCTGGAGTAGCGAACTCTTTTCCCTGAACCTGTGCTGTATCTTGGTAACAAATACTCAAGTATaGCAGTACAATGGTCTTGTG +
Preference number: 5 (lower is better)
Translates to: NNPWSSELFSLNLCCILVTNTQV*QYNGLV
Trigger: CACAAGACCATTGTACTGCAATACTTGAGTATTTGT...TACCAAGATACAGCACAGGTTCAGGGAAAAGAGTTCGCTACTCCAGGGGTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CAA 90 bp CCAGCTATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATACTCAGATTTCCAACTaGGATCAGACATCGGTAAGA +
Preference number: 5 (lower is better)
Translates to: PAIWSNIILSVPVRVFLNTQISN*DQTSVR
Trigger: TCTTACCGATGTCTGATCCAAGTTGGAAATCTGAGT...ATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAATAGCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CAA 90 bp CGAACTCTTTTCCCTGAACCTGTGCTGTATCTTGGTAACACATATTCAACATCTTCACTCCGGAGTTTCTaGACAGCTTTATGGAGTTTT +
Preference number: 5 (lower is better)
Translates to: RTLFPEPVLYLGNTYSTSSLRSF*TALWSF
Trigger: AAAACTCCATAAAGCTGTCAAGAAACTCCGGAGTGA...AGATGTTGAATATGTGTTACCAAGATACAGCACAGGTTCAGGGAAAAGAGTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CAA 90 bp ATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATGACATTTTCTCCAGCCTGAGTTaGCTGCAGCTCTTTTCAACT +
Preference number: 5 (lower is better)
Translates to: IWSNIILSVPVRVFLNDIFSSLS*LQLFST
Trigger: AGTTGAAAAGAGCTGCAGCAAACTCAGGCTGGAGAA...AATGTCATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CAA 90 bp ATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATGACATTAGGGGGCCAGAGAAATaGTGGGTGAAAGTAAAGATG +
Preference number: 5 (lower is better)
Translates to: IWSNIILSVPVRVFLNDIRGPEK*WVKVKM
Trigger: CATCTTTACTTTCACCCACAATTTCTCTGGCCCCCT...AATGTCATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CAA 90 bp ATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATGACATTCTGGCCTGGGGACAATaGATTCCTCTGATTTGTGTA +
Preference number: 5 (lower is better)
Translates to: IWSNIILSVPVRVFLNDILAWGQ*IPLICV
Trigger: TACACAAATCAGAGGAATCAATTGTCCCCAGGCCAG...AATGTCATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CAA 90 bp ACTGTGATAGTTAATCTTATGTATCCACTTAACTGGGTCACAAGATGCCCAGCTAAAGAAGAGTTCACCTaGAGGGACACATCTCCATTA +
Preference number: 5 (lower is better)
Translates to: TVIVNLMYPLNWVTRCPAKEEFT*RDTSPL
Trigger: TAATGGAGATGTGTCCCTCAAGGTGAACTCTTCTTT...AGCTGGGCATCTTGTGACCCAGTTAAGTGGATACATAAGATTAACTATCACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CAA 90 bp CGAACTCTTTTCCCTGAACCTGTGCTGTATCTTGGTAACACATATTCAACATCTGGTTGGCACAACAGATaGATTCATAAGACAGTCACA +
Preference number: 5 (lower is better)
Translates to: RTLFPEPVLYLGNTYSTSGWHNR*IHKTVT
Trigger: TGTGACTGTCTTATGAATCAATCTGTTGTGCCAACC...AGATGTTGAATATGTGTTACCAAGATACAGCACAGGTTCAGGGAAAAGAGTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CAA 90 bp CAATACACACCCAAAAATCAAGGTCATTATTTCATCCTCACACCTAGTCTACCAACTCAGATTTCCAACTaGGATCAGACATCGGTAAGA +
Preference number: 5 (lower is better)
Translates to: QYTPKNQGHYFILTPSLPTQISN*DQTSVR
Trigger: TCTTACCGATGTCTGATCCAAGTTGGAAATCTGAGT...TGGTAGACTAGGTGTGAGGATGAAATAATGACCTTGATTTTTGGGTGTGTATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CAA 90 bp ATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATGACATTACTCCAAGAATCCATTaGGTCTTGTCTCCCACATAC +
Preference number: 5 (lower is better)
Translates to: IWSNIILSVPVRVFLNDITPRIH*VLSPTY
Trigger: GTATGTGGGAGACAAGACCAAATGGATTCTTGGAGT...AATGTCATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CAA 90 bp CAATACACACCCAAAAATCAAGGTCATTATTTCATCCTCACACCTAGTCTACCAGGTTGGCACAACAGATaGATTCATAAGACAGTCACA +
Preference number: 5 (lower is better)
Translates to: QYTPKNQGHYFILTPSLPGWHNR*IHKTVT
Trigger: TGTGACTGTCTTATGAATCAATCTGTTGTGCCAACC...TGGTAGACTAGGTGTGAGGATGAAATAATGACCTTGATTTTTGGGTGTGTATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CAA 90 bp CCAGCTATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATACAAATACTCAAGTATaGCAGTACAATGGTCTTGTG +
Preference number: 5 (lower is better)
Translates to: PAIWSNIILSVPVRVFLNTNTQV*QYNGLV
Trigger: CACAAGACCATTGTACTGCAATACTTGAGTATTTGT...ATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAATAGCTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS-3UTR CAA 90 bp CGAACTCTTTTCCCTGAACCTGTGCTGTATCTTGGTAACACATATTCAACATCTCTGCCCCAATATATATaGATTCTGTTTCTCTGGAAA +
Preference number: 5 (lower is better)
Translates to: RTLFPEPVLYLGNTYSTSLPQYI*ILFLWK
Trigger: TTTCCAGAGAAACAGAATCAATATATATTGGGGCAG...AGATGTTGAATATGTGTTACCAAGATACAGCACAGGTTCAGGGAAAAGAGTTCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS CCA 90 bp GGTAATCAGTTGAACGTGAATGTTCTCTGTATTTATACTGGCTATTaGTACTTCTGTCAAGATTTCCTTTTTCAAAGCACTGTGGCAAAC +
Preference number: 5 (lower is better)
Translates to: GNQLNVNVLCIYTGY*YFCQDFLFQSTVAN
Trigger: GTTTGCCACAGTGCTTTGAAAAAGGAAATCTTGACAGAAGTACCAATAGCCAGTATAAATACAGAGAACATTCACGTTCAACTGATTACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645239.1
CDS-3UTR CAA 90 bp ATTTGGTCAAACATTATTCTGAGTGTTCCTGTGAGGGTGTTTCTCAATGACATTCTGCCCCAATATATATaGATTCTGTTTCTCTGGAAA +
Preference number: 5 (lower is better)
Translates to: IWSNIILSVPVRVFLNDILPQYI*ILFLWK
Trigger: TTTCCAGAGAAACAGAATCAATATATATTGGGGCAG...AATGTCATTGAGAAACACCCTCACAGGAACACTCAGAATAATGTTTGACCAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372514.7
ENST00000372517.8
CDS CAA 90 bp GGGCAGAGCAGCTCGGCTGTGCCCCCTAGTAGGGCCACGTGGAACTaGCCGGCATCCCCTGCGTGGCCTGACACATGCACAGACAGCCGG +
Preference number: 6 (lower is better)
Translates to: GQSSSAVPPSRATWN*PASPAWPDTCTDSR
Trigger: CCGGCTGTCTGTGCATGTGTCAGGCCACGCAGGGGATGCCGGCAAGTTCCACGTGGCCCTACTAGGGGGCACAGCCGAGCTGCTCTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372514.7
ENST00000372517.8
ENST00000642150.1
CDS GCA 72 bp CAAGCGCATCAGGAAGGCCCTCCCGGAGGCGTTGTCTaGGACTCGGCGGAGGCTCCAACTTCCAGTGGCCCG +
Preference number: 6 (lower is better)
Translates to: QAHQEGPPGGVV*DSAEAPTSSGP
Trigger: CGGGCCACTGGAAGTTGGAGCCTCCGCCGAGTCGCAGACAACGCCTCCGGGAGGGCCTTCCTGATGCGCTTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372517.8
ENST00000643061.1
ENST00000647120.1
CDS GCA 72 bp GCTCGGCTGTGCCCCCTAGTAGGGCCACGTGGAACTTaGCGGCATCCCCTGCGTGGCCTGACACATGCACAG +
Preference number: 6 (lower is better)
Translates to: ARLCPLVGPRGT*RHPLRGLTHAQ
Trigger: CTGTGCATGTGTCAGGCCACGCAGGGGATGCCGGCAAGTTCCACGTGGCCCTACTAGGGGGCACAGCCGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372514.7
ENST00000372517.8
ENST00000642150.1
CDS GCA 72 bp TGCAAGCTGGGAACACTCCCTCCCGGAGGCGTTGTCTaGGACTCGGCGGAGGCTCCAACTTCCAGTGGCCCG +
Preference number: 6 (lower is better)
Translates to: CKLGTLPPGGVV*DSAEAPTSSGP
Trigger: CGGGCCACTGGAAGTTGGAGCCTCCGCCGAGTCGCAGACAACGCCTCCGGGAGGGAGTGTTCCCAGCTTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642150.1
CDS CCA 72 bp CAGAGCAGCTCGGCTGTGCCCCCTAGTAGGGCCACGTaGAACTTGCCGGCATCCCCTGCGTGGCCTGGACAA +
Preference number: 6 (lower is better)
Translates to: QSSSAVPPSRAT*NLPASPAWPGQ
Trigger: TTGTCCAGGCCACGCAGGGGATGCCGGCAAGTTCCACGTGGCCCTACTAGGGGGCACAGCCGAGCTGCTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328249.3
CDS CCA 72 bp CAGAGCAGCTCGGCTGTGCCCCCTAGTAGGGCCACGTaGAACTTGCCGGCATCCCCTGCGTGGCCTGACACA +
Preference number: 6 (lower is better)
Translates to: QSSSAVPPSRAT*NLPASPAWPDT
Trigger: TGTGTCAGGCCACGCAGGGGATGCCGGCAAGTTCCACGTGGCCCTACTAGGGGGCACAGCCGAGCTGCTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372514.7
ENST00000372517.8
ENST00000642150.1
CDS CAA 72 bp GCAGGCAAGCGCATCAGGAAGGCCCTCCCGGAGGCGTaGTCTGCGACTCGGCGGAGGCTCCAACTTCCAGTG +
Preference number: 6 (lower is better)
Translates to: AGKRIRKALPEA*SATRRRLQLPV
Trigger: CACTGGAAGTTGGAGCCTCCGCCGAGTCGCAGACAACGCCTCCGGGAGGGCCTTCCTGATGCGCTTGCCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372517.8
ENST00000643061.1
ENST00000647120.1
CDS GCA 72 bp CACACCTCACACTCTGTTCCTCCCGGAGGCGTTGTCTaGGACTCGGCGGAGGCTCCAACTTCCAGTGGCCCG +
Preference number: 6 (lower is better)
Translates to: HTSHSVPPGGVV*DSAEAPTSSGP
Trigger: CGGGCCACTGGAAGTTGGAGCCTCCGCCGAGTCGCAGACAACGCCTCCGGGAGGAACAGAGTGTGAGGTGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487556.6
CDS CCA 72 bp GGCCCGGTCGGGAAAGGTACAGACTCCCAAGCCTCTTaGTCGGCGGCTCCAGCGACCGCCATTTTCCTCCAG +
Preference number: 6 (lower is better)
Translates to: GPVGKGTDSQAS*SAAPATAIFLQ
Trigger: CTGGAGGAAAATGGCGGTCGCTGGAGCCGCCGACCAAGAGGCTTGGGAGTCTGTACCTTTCCCGACCGGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372517.8
ENST00000487556.6
ENST00000643061.1
ENST00000645239.1
ENST00000647120.1
CDS CAA 72 bp AGCTCGGCTGTGCCCCCTAGTAGGGCCACGTGGAACTaGCCGGCATCCCCTGCGTGGCCTGACACATGCACA +
Preference number: 6 (lower is better)
Translates to: SSAVPPSRATWN*PASPAWPDTCT
Trigger: TGTGCATGTGTCAGGCCACGCAGGGGATGCCGGCAAGTTCCACGTGGCCCTACTAGGGGGCACAGCCGAGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372514.7
ENST00000372517.8
ENST00000642150.1
CDS CCA 72 bp GATATCCCGGGGACGGACAGAGCCCAGGAAGGACTCTaGAAAGGATTGCCAGGGCCGGGGGAACAGAACCCC +
Preference number: 6 (lower is better)
Translates to: DIPGTDRAQEGL*KGLPGPGEQNP
Trigger: GGGGTTCTGTTCCCCCGGCCCTGGCAATCCTTTCCAGAGTCCTTCCTGGGCTCTGTCCGTCCCCGGGATATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328249.3
ENST00000643061.1
CDS CCA 72 bp CGTTGTCTGCGACTCGGCGGAGGCTCCAACTTCCAGTaGCCCGGTCGGGAAAGGTACAGACTCCCAAGCCTC +
Preference number: 6 (lower is better)
Translates to: RCLRLGGGSNFQ*PGRERYRLPSL
Trigger: GAGGCTTGGGAGTCTGTACCTTTCCCGACCGGGCCACTGGAAGTTGGAGCCTCCGCCGAGTCGCAGACAACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000372517.8
ENST00000487556.6
ENST00000642150.1
ENST00000643061.1
ENST00000645239.1
ENST00000647120.1
CDS CAA 72 bp TGGCCCGGTCGGGAAAGGTACAGACTCCCAAGCCTCTaGGTCGGCGGCTCCAGCGACCGCCATTTTCCTCCA +
Preference number: 6 (lower is better)
Translates to: WPGRERYRLPSL*VGGSSDRHFPP
Trigger: TGGAGGAAAATGGCGGTCGCTGGAGCCGCCGACCAAGAGGCTTGGGAGTCTGTACCTTTCCCGACCGGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372517.8
ENST00000487556.6
ENST00000643061.1
ENST00000645239.1
ENST00000647120.1
CDS CAA 90 bp TGGCGTGACAGAGGGTATAACCCAGGAGCCGAGGCCGAGACGGTATaGCTGGTGCTCTGGGATCACAAAGGCCGGGGCTCCAATCCCAGC +
Preference number: 6 (lower is better)
Translates to: WRDRGYNPGAEAETV*LVLWDHKGRGSNPS
Trigger: GCTGGGATTGGAGCCCCGGCCTTTGTGATCCCAGAGCACCAGCAATACCGTCTCGGCCTCGGCTCCTGGGTTATACCCTCTGTCACGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328249.3
CDS CAA 90 bp AACTTCCAGTGGCCCGGTCGGGAAAGGTACAGACTCCCAAGCCTCTaGGTCGGCGGCTCCAGCGACCGCCATTTTCCTCCAGGAGAGGGA +
Preference number: 6 (lower is better)
Translates to: NFQWPGRERYRLPSL*VGGSSDRHFPPGEG
Trigger: TCCCTCTCCTGGAGGAAAATGGCGGTCGCTGGAGCCGCCGACCAAGAGGCTTGGGAGTCTGTACCTTTCCCGACCGGGCCACTGGAAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372517.8
ENST00000487556.6
ENST00000643061.1
ENST00000645239.1
ENST00000647120.1
CDS GCA 72 bp GAGGGTATAACCCAGGAGCCGAGGCCGAGACGGTATTaGTGGTGCTCTGGGATCACAAAGGCCGGGGCTCCA +
Preference number: 6 (lower is better)
Translates to: EGITQEPRPRRY*WCSGITKAGAP
Trigger: TGGAGCCCCGGCCTTTGTGATCCCAGAGCACCAGCAATACCGTCTCGGCCTCGGCTCCTGGGTTATACCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328249.3
CDS CAA 72 bp AGAGGGTATAACCCAGGAGCCGAGGCCGAGACGGTATaGCTGGTGCTCTGGGATCACAAAGGCCGGGGCTCC +
Preference number: 6 (lower is better)
Translates to: RGYNPGAEAETV*LVLWDHKGRGS
Trigger: GGAGCCCCGGCCTTTGTGATCCCAGAGCACCAGCAATACCGTCTCGGCCTCGGCTCCTGGGTTATACCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328249.3
CDS GCA 72 bp ATAACCCAGGAGCCGAGGCCGAGACGGTATTGCTGGTaGTCTGGGATCACAAAGGCCGGGGCTCCAATCCCA +
Preference number: 6 (lower is better)
Translates to: ITQEPRPRRYCW*SGITKAGAPIP
Trigger: TGGGATTGGAGCCCCGGCCTTTGTGATCCCAGAGCACCAGCAATACCGTCTCGGCCTCGGCTCCTGGGTTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328249.3
CDS CCA 72 bp GGTATAACCCAGGAGCCGAGGCCGAGACGGTATTGCTaGTGCTCTGGGATCACAAAGGCCGGGGCTCCAATC +
Preference number: 6 (lower is better)
Translates to: GITQEPRPRRYC*CSGITKAGAPI
Trigger: GATTGGAGCCCCGGCCTTTGTGATCCCAGAGCACCAGCAATACCGTCTCGGCCTCGGCTCCTGGGTTATACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328249.3
CDS CAA 72 bp TGTCTCACACCTCACACTCTGTTCCTCCCGGAGGCGTaGTCTGCGACTCGGCGGAGGCTCCAACTTCCAGTG +
Preference number: 6 (lower is better)
Translates to: CLTPHTLFLPEA*SATRRRLQLPV
Trigger: CACTGGAAGTTGGAGCCTCCGCCGAGTCGCAGACAACGCCTCCGGGAGGAACAGAGTGTGAGGTGTGAGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487556.6
CDS TCA 72 bp AGATCTTCATCCTGGTCCTTCCCATCCCGGAATATGTaGACAGCCTGGGAGCGCTGCGGGAATGGGGACCGC +
Preference number: 6 (lower is better)
Translates to: RSSSWSFPSRNM*TAWERCGNGDR
Trigger: GCGGTCCCCATTCCCGCAGCGCTCCCAGGCTGTTCACATATTCCGGGATGGGAAGGACCAGGATGAAGATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328249.3
ENST00000372514.7
ENST00000372517.8
ENST00000642150.1
CDS GCA 72 bp GGGACGCTTGTTCCTCTCACAGGCAAAGCTGGAGTTTaGAAGCTGGGAACACTCCCTCCCGGAGGCGTTGTC +
Preference number: 6 (lower is better)
Translates to: GTLVPLTGKAGV*KLGTLPPGGVV
Trigger: GACAACGCCTCCGGGAGGGAGTGTTCCCAGCTTGCAAACTCCAGCTTTGCCTGTGAGAGGAACAAGCGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642150.1
CDS CAA 72 bp TCTCACCCTCTAAAACCTAGTAGCCTCCCGGAGGCGTaGTCTGCGACTCGGCGGAGGCTCCAACTTCCAGTG +
Preference number: 6 (lower is better)
Translates to: SHPLKPSSLPEA*SATRRRLQLPV
Trigger: CACTGGAAGTTGGAGCCTCCGCCGAGTCGCAGACAACGCCTCCGGGAGGCTACTAGGTTTTAGAGGGTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645239.1
CDS GCA 72 bp AGCTGGAGTTTGCAAGCTGGGAACACTCCTTCCCCATaGAGAGAGACCAGGGAGCAGGCAAGCGCATCAGGA +
Preference number: 6 (lower is better)
Translates to: SWSLQAGNTPSP*RETREQASASG
Trigger: TCCTGATGCGCTTGCCTGCTCCCTGGTCTCTCTGCATGGGGAAGGAGTGTTCCCAGCTTGCAAACTCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000372514.7
ENST00000372517.8
ENST00000470938.1
ENST00000487556.6
ENST00000643061.1
ENST00000645239.1
ENST00000647120.1
CDS TCA 72 bp GTACCAGGCAGGGAAAGAGGATCAGAAACTCCTACCTaGCACATGCACAGACAGCCGGAGGAAGACGAGAGG +
Preference number: 6 (lower is better)
Translates to: VPGRERGSETPT*HMHRQPEEDER
Trigger: CCTCTCGTCTTCCTCCGGCTGTCTGTGCATGTGTCAGGTAGGAGTTTCTGATCCTCTTTCCCTGCCTGGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328249.3
ENST00000643061.1
CDS TCA 72 bp GGGAGCAGGCAAGCGCATCAGGAAGGCCTTCAGCTCTaGGCTGTATTCGACATGATTCCTCTGAGTGTTCCC +
Preference number: 6 (lower is better)
Translates to: GSRQAHQEGLQL*AVFDMIPLSVP
Trigger: GGGAACACTCAGAGGAATCATGTCGAATACAGCTCAGAGCTGAAGGCCTTCCTGATGCGCTTGCCTGCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470938.1
ENST00000487556.6
CDS GCA 72 bp ACACACCGTGGAGGCTCTTTAAGGCGGAAGGAGGTCTaGGGGGATGTGAGAGCTTCATACTCATTCCCACGA +
Preference number: 6 (lower is better)
Translates to: THRGGSLRRKEV*GDVRASYSFPR
Trigger: TCGTGGGAATGAGTATGAAGCTCTCACATCCCCGCAGACCTCCTTCCGCCTTAAAGAGCCTCCACGGTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328249.3
ENST00000372514.7
ENST00000372517.8
ENST00000487556.6
CDS GCA 72 bp GGGACGCTTGTTCCTCTCACAGGCAAAGCTGGAGTTTaGAAGCTGGGAACACTCCTTCCCCATGCAGAGAGA +
Preference number: 6 (lower is better)
Translates to: GTLVPLTGKAGV*KLGTLLPHAER
Trigger: TCTCTCTGCATGGGGAAGGAGTGTTCCCAGCTTGCAAACTCCAGCTTTGCCTGTGAGAGGAACAAGCGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000372514.7
ENST00000372517.8
ENST00000470938.1
ENST00000487556.6
ENST00000643061.1
ENST00000645239.1
ENST00000647120.1
CDS CAA 90 bp GGTGTCCAAGGCCAGGCTTGGGAAATGCCTGTTTCAAGCCAATCTTaGCCCAAGATGCAGCCTGGAGGTTTCCCTGACAGCCTTTTCCAG +
Preference number: 6 (lower is better)
Translates to: GVQGQAWEMPVSSQS*PKMQPGGFPDSLFQ
Trigger: CTGGAAAAGGCTGTCAGGGAAACCTCCAGGCTGCATCTTGGGCAAAGATTGGCTTGAAACAGGCATTTCCCAAGCCTGGCCTTGGACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328249.3
CDS CAA 90 bp TCCTTCAGCTCTGGGGCCTTCGGGGGTAGTAAAGAAGAGTTCACCTaGAGGGACACATCTCCATTAGCATGGCCTTTCCCTTCTGGCCTG +
Preference number: 6 (lower is better)
Translates to: SFSSGAFGGSKEEFT*RDTSPLAWPFPSGL
Trigger: CAGGCCAGAAGGGAAAGGCCATGCTAATGGAGATGTGTCCCTCAAGGTGAACTCTTCTTTACTACCCCCGAAGGCCCCAGAGCTGAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000328249.3
ENST00000372514.7
ENST00000372517.8
ENST00000487556.6
CDS CCA 72 bp CGCACGTCAAGGATCTGCAGAGTGACACTTCCCTCTTaGGCATCTCTCACTAGCACCGTCCTCCCCTTATAT +
Preference number: 6 (lower is better)
Translates to: RTSRICRVTLPS*ASLTSTVLPLY
Trigger: ATATAAGGGGAGGACGGTGCTAGTGAGAGATGCCCAAGAGGGAAGTGTCACTCTGCAGATCCTTGACGTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328249.3
ENST00000372514.7
ENST00000372517.8
ENST00000642150.1
CDS CAA 72 bp CCATCTCCATCCGAACACCTTCTGGATCAGGGACGCTaGTTCCTCTCACAGGCAAAGCTGGAGTTTGCAAGC +
Preference number: 6 (lower is better)
Translates to: PSPSEHLLDQGR*FLSQAKLEFAS
Trigger: GCTTGCAAACTCCAGCTTTGCCTGTGAGAGGAACAAGCGTCCCTGATCCAGAAGGTGTTCGGATGGAGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372514.7
ENST00000372517.8
ENST00000642150.1
ENST00000643061.1
CDS CAA 72 bp TCGCCATCTCCATCCGAACTTCTGGATCAGGGACGCTaGTTCCTCTCACAGGCAAAGCTGGAGTTTGCAAGC +
Preference number: 6 (lower is better)
Translates to: SPSPSELLDQGR*FLSQAKLEFAS
Trigger: GCTTGCAAACTCCAGCTTTGCCTGTGAGAGGAACAAGCGTCCCTGATCCAGAAGTTCGGATGGAGATGGCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645239.1
CDS CAA 90 bp ATGAAGAGAGAGAGGAGGACTCACCACCTTCTGGATCAGGGACGCTaGTTCCTCTCACAGGCAAAGCTGGAGTTTGCAAGCTGGGAACAC +
Preference number: 6 (lower is better)
Translates to: MKRERRTHHLLDQGR*FLSQAKLEFASWEH
Trigger: GTGTTCCCAGCTTGCAAACTCCAGCTTTGCCTGTGAGAGGAACAAGCGTCCCTGATCCAGAAGGTGGTGAGTCCTCCTCTCTCTCTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470938.1
CDS CCA 72 bp TCAGAGCCTAGGATGCTGACAACGAAATCAAATCTCTaGGGGTTGTCAGGTACAGGCTGCCGTCTGTCTCCA +
Preference number: 6 (lower is better)
Translates to: SEPRMLTTKSNL*GLSGTGCRLSP
Trigger: TGGAGACAGACGGCAGCCTGTACCTGACAACCCCCAGAGATTTGATTTCGTTGTCAGCATCCTAGGCTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328249.3
ENST00000372514.7
ENST00000372517.8
ENST00000487556.6
CDS CAA 72 bp CCTAGGATGCTGACAACGAAATCAAATCTCTGGGGGTaGTCAGGTACAGGCTGCCGTCTGTCTCCAAGCCTT +
Preference number: 6 (lower is better)
Translates to: PRMLTTKSNLWG*SGTGCRLSPSL
Trigger: AAGGCTTGGAGACAGACGGCAGCCTGTACCTGACAACCCCCAGAGATTTGATTTCGTTGTCAGCATCCTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328249.3
ENST00000372514.7
ENST00000372517.8
ENST00000487556.6
CDS CAA 90 bp TGCAACCTGCAGGATCACGGTGTCCTCTTTACTCAGATTTCCAACTaGGATCAGACATCGGTAAGACCCTTGGTCCTCAAGGCGCACGTC +
Preference number: 6 (lower is better)
Translates to: CNLQDHGVLFTQISN*DQTSVRPLVLKAHV
Trigger: GACGTGCGCCTTGAGGACCAAGGGTCTTACCGATGTCTGATCCAAGTTGGAAATCTGAGTAAAGAGGACACCGTGATCCTGCAGGTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328249.3
ENST00000372514.7
ENST00000372517.8
ENST00000642150.1
CDS TCA 72 bp GGGGCTCCAATCCCAGCTCTGCTACTTACCTCCTTGTaGTACTGTGACCGAACTTCTCTGAGACTGTGTTTC +
Preference number: 6 (lower is better)
Translates to: GAPIPALLLTSL*YCDRTSLRLCF
Trigger: GAAACACAGTCTCAGAGAAGTTCGGTCACAGTATCACAAGGAGGTAAGTAGCAGAGCTGGGATTGGAGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328249.3
CDS GCA 72 bp GGGAAATGCCTGTTTCAAGCCAATCTTTGCCCAAGATaGAGCCTGGAGGTTTCCCTGACAGCCTTTTCCAGT +
Preference number: 6 (lower is better)
Translates to: GKCLFQANLCPR*SLEVSLTAFSS
Trigger: ACTGGAAAAGGCTGTCAGGGAAACCTCCAGGCTGCATCTTGGGCAAAGATTGGCTTGAAACAGGCATTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328249.3
CDS CAA 72 bp CAGATTTCCAACTTGGATCAGACATCGGTAAGACCCTaGGTCCTCAAGGCGCACGTCAAGGATCTGCAGAGT +
Preference number: 6 (lower is better)
Translates to: QISNLDQTSVRP*VLKAHVKDLQS
Trigger: ACTCTGCAGATCCTTGACGTGCGCCTTGAGGACCAAGGGTCTTACCGATGTCTGATCCAAGTTGGAAATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328249.3
ENST00000372514.7
ENST00000372517.8
ENST00000642150.1
CDS CAA 90 bp CTCTTTACTCAGATTTCCAACTTGGATCAGACATCGGTAAGACCCTaGGTCCTCAAGGCGCACGTCAAGGATCTGCAGAGTGACACTTCC +
Preference number: 6 (lower is better)
Translates to: LFTQISNLDQTSVRP*VLKAHVKDLQSDTS
Trigger: GGAAGTGTCACTCTGCAGATCCTTGACGTGCGCCTTGAGGACCAAGGGTCTTACCGATGTCTGATCCAAGTTGGAAATCTGAGTAAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328249.3
ENST00000372514.7
ENST00000372517.8
ENST00000642150.1
CDS CAA 90 bp TACTCAGAGCCTAGGATGCTGACAACGAAATCAAATCTCTGGGGGTaGTCAGGTACAGGCTGCCGTCTGTCTCCAAGCCTTACACATCTT +
Preference number: 6 (lower is better)
Translates to: YSEPRMLTTKSNLWG*SGTGCRLSPSLTHL
Trigger: AAGATGTGTAAGGCTTGGAGACAGACGGCAGCCTGTACCTGACAACCCCCAGAGATTTGATTTCGTTGTCAGCATCCTAGGCTCTGAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000328249.3
ENST00000372514.7
ENST00000372517.8
ENST00000487556.6
CDS CAA 90 bp TGCTTCCTGGGATTACCTCCTAAATACACTCTTGAACTGAAGTACTaGTCTCACACCTCACACTCTGTTCCTCCCGGAGGCGTTGTCTGC +
Preference number: 6 (lower is better)
Translates to: CFLGLPPKYTLELKY*SHTSHSVPPGGVVC
Trigger: GCAGACAACGCCTCCGGGAGGAACAGAGTGTGAGGTGTGAGACAAGTACTTCAGTTCAAGAGTGTATTTAGGAGGTAATCCCAGGAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487556.6
CDS TCA 72 bp CACTGCCACAAAATGCAACCGGGCTCTTCTCCAGCCTaGGTTTGCTGCAGCTCTTTTCAACTTCAGTTCACT +
Preference number: 6 (lower is better)
Translates to: HCHKMQPGSSPA*VCCSSFQLQFT
Trigger: AGTGAACTGAAGTTGAAAAGAGCTGCAGCAAACTCAGGCTGGAGAAGAGCCCGGTTGCATTTTGTGGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000328249.3
ENST00000372514.7
ENST00000372517.8
ENST00000487556.6
ENST00000647120.1
CDS GCA 72 bp ATCCTGTCCTCCTGGACCCCATCTAAGGAAATGTCATaGCTGGGTGATAAAAGGGACTTCCAGATGGCTTCA +
Preference number: 6 (lower is better)
Translates to: ILSSWTPSKEMS*LGDKRDFQMAS
Trigger: TGAAGCCATCTGGAAGTCCCTTTTATCACCCAGGCATGACATTTCCTTAGATGGGGTCCAGGAGGACAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642150.1
CDS CCA 72 bp GGGAGCAGGCAAGCGCATCAGGAAGGCCTAGGGATGTaGGCCGGGAAAAGTTCATATTTTATGAAATATGAG +
Preference number: 6 (lower is better)
Translates to: GSRQAHQEGLGM*AGKSSYFMKYE
Trigger: CTCATATTTCATAAAATATGAACTTTTCCCGGCCCACATCCCTAGGCCTTCCTGATGCGCTTGCCTGCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372514.7
CDS CAA 72 bp TACAGGCTGCCGTCTGTCTCCAAGCCTTACACATCTTaGGTCCTCAGAAAGGATGAGTTTGGGATGTGCTGT +
Preference number: 6 (lower is better)
Translates to: YRLPSVSKPYTS*VLRKDEFGMCC
Trigger: ACAGCACATCCCAAACTCATCCTTTCTGAGGACCAAAGATGTGTAAGGCTTGGAGACAGACGGCAGCCTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328249.3
ENST00000372514.7
ENST00000372517.8
ENST00000487556.6
CDS GCA 72 bp TTTTTACAGTTGGTGTCCAAGGCCAGGCTTGGGAAATaGCTGTTTCAAGCCAATCTTTGCCCAAGATGCAGC +
Preference number: 6 (lower is better)
Translates to: FLQLVSKARLGK*LFQANLCPRCS
Trigger: GCTGCATCTTGGGCAAAGATTGGCTTGAAACAGGCATTTCCCAAGCCTGGCCTTGGACACCAACTGTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328249.3
CDS CCA 72 bp GTGAGGGTTGAAAGAGGTAAATGCTCACACAGAGGCTaGCGTGTTAAGTCTCTAAATGCCGTGAGTGAGGAT +
Preference number: 6 (lower is better)
Translates to: VRVERGKCSHRG*RVKSLNAVSED
Trigger: ATCCTCACTCACGGCATTTAGAGACTTAACACGCCAGCCTCTGTGTGAGCATTTACCTCTTTCAACCCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328249.3
CDS CAA 72 bp CAGGATCACGGTGTCCTCTTTACTCAGATTTCCAACTaGGATCAGACATCGGTAAGACCCTTGGTCCTCAAG +
Preference number: 6 (lower is better)
Translates to: QDHGVLFTQISN*DQTSVRPLVLK
Trigger: CTTGAGGACCAAGGGTCTTACCGATGTCTGATCCAAGTTGGAAATCTGAGTAAAGAGGACACCGTGATCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000328249.3
ENST00000372514.7
ENST00000372517.8
ENST00000642150.1
CDS TCA 72 bp GCTTCCTGGGATTACCTCCTAAATACACTCTTGAACTaGAGTACTTGTCTCACACCTCACACTCTGTTCTGG +
Preference number: 6 (lower is better)
Translates to: ASWDYLLNTLLN*STCLTPHTLFW
Trigger: CCAGAACAGAGTGTGAGGTGTGAGACAAGTACTTCAGTTCAAGAGTGTATTTAGGAGGTAATCCCAGGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470938.1
CDS CCA 72 bp TCCAGCATATTCAGTTTAATAAGGATCCTGTCCTCCTaGACCCCATCTAAGGAAATGTCATGCCTGGGTGAT +
Preference number: 6 (lower is better)
Translates to: SSIFSLIRILSS*TPSKEMSCLGD
Trigger: ATCACCCAGGCATGACATTTCCTTAGATGGGGTCCAGGAGGACAGGATCCTTATTAAACTGAATATGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642150.1
CDS CAA 72 bp TTCCCTTCTGGCCTGGGGACAATTGATTCCTCTGATTaGTGTAGTTCTGAACAAATGACTAGAGGTGCTGTG +
Preference number: 6 (lower is better)
Translates to: FPSGLGTIDSSD*CSSEQMTRGAV
Trigger: CACAGCACCTCTAGTCATTTGTTCAGAACTACACAAATCAGAGGAATCAATTGTCCCCAGGCCAGAAGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000328249.3
ENST00000372514.7
ENST00000372517.8
ENST00000487556.6
CDS CAA 72 bp GGATTACCTCCTAAATACACTCTTGAACTGAAGTACTaGTCTCACACCTCACACTCTGTTCTGGGGGTGTAC +
Preference number: 6 (lower is better)
Translates to: GLPPKYTLELKY*SHTSHSVLGVY
Trigger: GTACACCCCCAGAACAGAGTGTGAGGTGTGAGACAAGTACTTCAGTTCAAGAGTGTATTTAGGAGGTAATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470938.1
CDS TCA 72 bp AATCCCAGCTCTGCTACTTACCTCCTTGTGATACTGTaGCCGAACTTCTCTGAGACTGTGTTTCTTCATCTT +
Preference number: 6 (lower is better)
Translates to: NPSSATYLLVIL*PNFSETVFLHL
Trigger: AAGATGAAGAAACACAGTCTCAGAGAAGTTCGGTCACAGTATCACAAGGAGGTAAGTAGCAGAGCTGGGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328249.3
CDS TCA 72 bp AGCAAAAGTGTCAGCAGAAGGAGCTTGTGCCATGGATaGGGAGCAAAACTTACTGACAGCTTTATGGAGTTT +
Preference number: 6 (lower is better)
Translates to: SKSVSRRSLCHG*GAKLTDSFMEF
Trigger: AAACTCCATAAAGCTGTCAGTAAGTTTTGCTCCTCATCCATGGCACAAGCTCCTTCTGCTGACACTTTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642150.1
CDS CCA 72 bp AAAAGACATAATGTTTCCAGCCAAGCTTCCTTATTCTaGGGACGCCAATATCACATGTACCAGGCAGGGAAA +
Preference number: 6 (lower is better)
Translates to: KRHNVSSQASLF*GRQYHMYQAGK
Trigger: TTTCCCTGCCTGGTACATGTGATATTGGCGTCCCCAGAATAAGGAAGCTTGGCTGGAAACATTATGTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328249.3
ENST00000643061.1
CDS CAA 90 bp TGCTTCCTGGGATTACCTCCTAAATACACTCTTGAACTGAAGTACTaGTCTCACACCTCACACTCTGTTCTGGGGGTGTACAAATTAAGA +
Preference number: 6 (lower is better)
Translates to: CFLGLPPKYTLELKY*SHTSHSVLGVYKLR
Trigger: TCTTAATTTGTACACCCCCAGAACAGAGTGTGAGGTGTGAGACAAGTACTTCAGTTCAAGAGTGTATTTAGGAGGTAATCCCAGGAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470938.1
CDS TCA 72 bp CAAACGGGATCTCACTTGATCCTCCCAATAAACTCATaGATGAAGAAGGTGGCAATCATCAATCCCCACTTT +
Preference number: 6 (lower is better)
Translates to: QTGSHLILPINS*MKKVAIINPHF
Trigger: AAAGTGGGGATTGATGATTGCCACCTTCTTCATTCATGAGTTTATTGGGAGGATCAAGTGAGATCCCGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645239.1
CDS CCA 72 bp GGTACTTCTGTCAAGATTTCCTTTTTCAAAGCACTGTaGCAAACGGGATCTCACTTGATCCTCCCAATAAAC +
Preference number: 6 (lower is better)
Translates to: GTSVKISFFKAL*QTGSHLILPIN
Trigger: GTTTATTGGGAGGATCAAGTGAGATCCCGTTTGCCACAGTGCTTTGAAAAAGGAAATCTTGACAGAAGTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645239.1
CDS GCA 72 bp AAAGAGGTCCTCACACATGAAATGATGGAGAAGTACTaGTCCAGCATATTCAGTTTAATAAGGATCCTGTCC +
Preference number: 6 (lower is better)
Translates to: KEVLTHEMMEKY*SSIFSLIRILS
Trigger: GGACAGGATCCTTATTAAACTGAATATGCTGGAGCAGTACTTCTCCATCATTTCATGTGTGAGGACCTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642150.1
CDS TCA 72 bp TACTTACCTCCTTGTGATACTGTGACCGAACTTCTCTaGGACTGTGTTTCTTCATCTTCAAAATGGGTAAAA +
Preference number: 6 (lower is better)
Translates to: YLPPCDTVTELL*DCVSSSSKWVK
Trigger: TTTTACCCATTTTGAAGATGAAGAAACACAGTCTCAGAGAAGTTCGGTCACAGTATCACAAGGAGGTAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328249.3
CDS CAA 72 bp TGGCAATCATCAATCCCCACTTTTCGAATTAAGAAATaGAGCCTCGGAATTCGAATTCTGAGCAATTCCAAT +
Preference number: 6 (lower is better)
Translates to: WQSSIPTFRIKK*SLGIRILSNSN
Trigger: ATTGGAATTGCTCAGAATTCGAATTCCGAGGCTCAATTTCTTAATTCGAAAAGTGGGGATTGATGATTGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645239.1
CDS GCA 72 bp CAGGTTGTTTCACAGAGCACTAGGATATTCATTCACTaGTATATAGTAGACCATTATATAAATCTACCAACA +
Preference number: 6 (lower is better)
Translates to: QVVSQSTRIFIH*YIVDHYINLPT
Trigger: TGTTGGTAGATTTATATAATGGTCTACTATATAGCAGTGAATGAATATCCTAGTGCTCTGTGAAACAACCTG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470938.1
CDS CCA 72 bp TTGAACGTGAATGTTCTCTGTATTTATACTGGCTATTaGTACTTCTGTCAAGATTTCCTTTTTCAAAGCACT +
Preference number: 6 (lower is better)
Translates to: LNVNVLCIYTGY*YFCQDFLFQST
Trigger: AGTGCTTTGAAAAAGGAAATCTTGACAGAAGTACCAATAGCCAGTATAAATACAGAGAACATTCACGTTCAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645239.1