Pregenerated sensors for ERLNC1 (Homo sapiens)
Ensembl gene IDs: ENSG00000230550Ensembl transcript IDs: ENST00000433869.1, ENST00000654104.1, ENST00000658822.1, ENST00000663115.1
Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TCAGTCACTGAATACTCTTTCTCGTGTTCTGGCCCCTGGGCTGGGTaGGGGAGTGATCGGTCTGTCCTGTGGGAAGGTGAGAGAGGGCCG | + |
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Preference number: 5 (lower is better) Translates to: SVTEYSFSCSGPWAG*GSDRSVLWEGERGP Trigger: CGGCCCTCTCTCACCTTCCCACAGGACAGACCGATCACTCCCTCACCCAGCCCAGGGGCCAGAACACGAGAAAGAGTATTCAGTGACTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000433869.1 ENST00000654104.1 ENST00000658822.1 ENST00000663115.1 |
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| CDS TCA 90 bp | TCCTCTCTTCCTTCTCCAGAGGGGGCAGAGGAGTGCCTCAGTCACTaGATACTCTTTCTCGTGTTCTGGCCCCTGGGCTGGGTGAGGGAG | + |
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Preference number: 5 (lower is better) Translates to: SSLPSPEGAEECLSH*ILFLVFWPLGWVRE Trigger: CTCCCTCACCCAGCCCAGGGGCCAGAACACGAGAAAGAGTATTCAGTGACTGAGGCACTCCTCTGCCCCCTCTGGAGAAGGAAGAGAGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000433869.1 ENST00000654104.1 ENST00000658822.1 ENST00000663115.1 |
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| CDS GCA 90 bp | CCATATCACCTCTCCCAGCAGACTCCCTGGACTCAGAGAGGCCTTTaGAGAACCTCTGAGGGGCACCCAGGCCTTCAGAGAGAGTGCACA | + |
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Preference number: 5 (lower is better) Translates to: PYHLSQQTPWTQRGL*RTSEGHPGLQRECT Trigger: TGTGCACTCTCTCTGAAGGCCTGGGTGCCCCTCAGAGGTTCTGCAAAGGCCTCTCTGAGTCCAGGGAGTCTGCTGGGAGAGGTGATATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000654104.1 ENST00000658822.1 ENST00000663115.1 |
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| CDS CCA 90 bp | CACATCTTACGCAGACCTGTCGGCACAGATAAACTCCAGGAAGCATaGGGGAGGCCTCCCCCATATCACCTCTCCCAGCAGACTCCCTGG | + |
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Preference number: 5 (lower is better) Translates to: HILRRPVGTDKLQEA*GRPPPYHLSQQTPW Trigger: CCAGGGAGTCTGCTGGGAGAGGTGATATGGGGGAGGCCTCCCCCATGCTTCCTGGAGTTTATCTGTGCCGACAGGTCTGCGTAAGATGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000654104.1 ENST00000658822.1 ENST00000663115.1 |
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| CDS CCA 90 bp | CCACTGCTCCTGTTGCCCTTGTTCTTAGTCTGGAATCCCCAGGTCTaGACACTCGTTCTCACCTGCCTTGTCCTTTCCCTGTGTCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: PLLLLPLFLVWNPQV*TLVLTCLVLSLCLL Trigger: AAGGAGACACAGGGAAAGGACAAGGCAGGTGAGAACGAGTGTCCAGACCTGGGGATTCCAGACTAAGAACAAGGGCAACAGGAGCAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000433869.1 ENST00000654104.1 ENST00000658822.1 |
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| CDS TCA 90 bp | CCTCAGTTTCCCAATGGGGCTGGACTAGATAACCTCAGATCTTCTTaGGCTTTGACCTTCTCAAAGCCTGGAAGGGACCCTGTCCTCTCT | + |
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Preference number: 5 (lower is better) Translates to: PQFPNGAGLDNLRSS*ALTFSKPGRDPVLS Trigger: AGAGAGGACAGGGTCCCTTCCAGGCTTTGAGAAGGTCAAAGCTCAAGAAGATCTGAGGTTATCTAGTCCAGCCCCATTGGGAAACTGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000433869.1 ENST00000654104.1 ENST00000658822.1 ENST00000663115.1 |
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| CDS TCA 90 bp | CAGGGATGCCCTCAGTCAGTGACTTTTATGCTCTGCCTCATGCTTTaGCGCCCATGTCTTTATCAGCTTCCTAGCATAACCAGAGGAGTC | + |
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Preference number: 5 (lower is better) Translates to: QGCPQSVTFMLCLML*RPCLYQLPSITRGV Trigger: GACTCCTCTGGTTATGCTAGGAAGCTGATAAAGACATGGGCGTCAAAGCATGAGGCAGAGCATAAAAGTCACTGACTGAGGGCATCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000433869.1 ENST00000654104.1 ENST00000658822.1 ENST00000663115.1 |
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| CDS TCA 90 bp | GTTCGATTTGGATCCTTGGACGGGCCAAGGACTGCTTTCCTTAAATaGAGAAGTAAAGGATCCAGCAGTGCAAGAGGTATCTGGAGGCTT | + |
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Preference number: 5 (lower is better) Translates to: VRFGSLDGPRTAFLK*RSKGSSSARGIWRL Trigger: AAGCCTCCAGATACCTCTTGCACTGCTGGATCCTTTACTTCTTCATTTAAGGAAAGCAGTCCTTGGCCCGTCCAAGGATCCAAATCGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000654104.1 ENST00000658822.1 ENST00000663115.1 |
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| CDS TCA 90 bp | GCCACAAAGCAAGCATGCTCTTCATTGAAGGCTTTAATGTTCCTTTaGCAGTGTAGGAGTGAGCTAAAGAAGCTCTTAGTTTGCTTTCTC | + |
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Preference number: 5 (lower is better) Translates to: ATKQACSSLKALMFL*QCRSELKKLLVCFL Trigger: GAGAAAGCAAACTAAGAGCTTCTTTAGCTCACTCCTACACTGTCAAAGGAACATTAAAGCCTTCAATGAAGAGCATGCTTGCTTTGTGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000433869.1 ENST00000654104.1 |
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| CDS CCA 72 bp | CCAGGGCACTACTCTTCCTCCTGGGGAGGATCTTTGTaGGAGTCAGCTCGACTTAGGGAGCTGCACCGCCTC | + |
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Preference number: 6 (lower is better) Translates to: PGHYSSSWGGSL*ESARLRELHRL Trigger: GAGGCGGTGCAGCTCCCTAAGTCGAGCTGACTCCCACAAAGATCCTCCCCAGGAGGAAGAGTAGTGCCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000433869.1 ENST00000654104.1 ENST00000658822.1 |
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| CDS CCA 72 bp | CGCAGACCTGTCGGCACAGATAAACTCCAGGAAGCATaGGGGAGGCCTCCCCCATATCACCTCTCCCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: RRPVGTDKLQEA*GRPPPYHLSQQ Trigger: CTGCTGGGAGAGGTGATATGGGGGAGGCCTCCCCCATGCTTCCTGGAGTTTATCTGTGCCGACAGGTCTGCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000654104.1 ENST00000658822.1 ENST00000663115.1 |
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| CDS TCA 72 bp | CCTTCTCCAGAGGGGGCAGAGGAGTGCCTCAGTCACTaGATACTCTTTCTCGTGTTCTGGCCCCTGGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: PSPEGAEECLSH*ILFLVFWPLGW Trigger: CCAGCCCAGGGGCCAGAACACGAGAAAGAGTATTCAGTGACTGAGGCACTCCTCTGCCCCCTCTGGAGAAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000433869.1 ENST00000654104.1 ENST00000658822.1 ENST00000663115.1 |
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| CDS GCA 72 bp | CTGCCTCCTCAAGAGAGCTCCATTGCTCCAGCTCCCTaGCAGGGCACTACTCTTCCTCCTGGGGAGGATCTT | + |
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Preference number: 6 (lower is better) Translates to: LPPQESSIAPAP*QGTTLPPGEDL Trigger: AAGATCCTCCCCAGGAGGAAGAGTAGTGCCCTGGCAGGGAGCTGGAGCAATGGAGCTCTCTTGAGGAGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000433869.1 ENST00000654104.1 ENST00000658822.1 |
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| CDS GCA 72 bp | CTCTTGCTACCCTCTGCCTCCTCAAGAGAGCTCCATTaGTCCAGCTCCCTGCCAGGGCACTACTCTTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: LLLPSASSRELH*SSSLPGHYSSS Trigger: GGAGGAAGAGTAGTGCCCTGGCAGGGAGCTGGAGCAATGGAGCTCTCTTGAGGAGGCAGAGGGTAGCAAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658822.1 |
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| CDS TCA 72 bp | GAATACTCTTTCTCGTGTTCTGGCCCCTGGGCTGGGTaGGGGAGTGATCGGTCTGTCCTGTGGGAAGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: EYSFSCSGPWAG*GSDRSVLWEGE Trigger: CTCACCTTCCCACAGGACAGACCGATCACTCCCTCACCCAGCCCAGGGGCCAGAACACGAGAAAGAGTATTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000433869.1 ENST00000654104.1 ENST00000658822.1 ENST00000663115.1 |
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| CDS TCA 72 bp | GACAGAGGGAGTGATGAGGCTCAGATTCAGGGCTCTTaGGGCCAAGCACCTGTCTATCAGCCCTCCTTTCAC | + |
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Preference number: 6 (lower is better) Translates to: DRGSDEAQIQGS*GQAPVYQPSFH Trigger: GTGAAAGGAGGGCTGATAGACAGGTGCTTGGCCTCAAGAGCCCTGAATCTGAGCCTCATCACTCCCTCTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000654104.1 ENST00000658822.1 ENST00000663115.1 |
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| CDS CAA 90 bp | GGCCAAGCACCTGTCTATCAGCCCTCCTTTCACTGGCTACCTTTTTaGCCACTGCCCAGCCTTTCTGCAGATGTCCCTAAGGTAGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: GQAPVYQPSFHWLPF*PLPSLSADVPKVEV Trigger: CACCTCTACCTTAGGGACATCTGCAGAAAGGCTGGGCAGTGGCAAAAAAGGTAGCCAGTGAAAGGAGGGCTGATAGACAGGTGCTTGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000654104.1 ENST00000658822.1 ENST00000663115.1 |
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| CDS CCA 72 bp | CTGTTGCCCTTGTTCTTAGTCTGGAATCCCCAGGTCTaGACACTCGTTCTCACCTGCCTTGTCCTTTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: LLPLFLVWNPQV*TLVLTCLVLSL Trigger: CAGGGAAAGGACAAGGCAGGTGAGAACGAGTGTCCAGACCTGGGGATTCCAGACTAAGAACAAGGGCAACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000433869.1 ENST00000654104.1 ENST00000658822.1 |
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| CDS CCA 72 bp | CCTCAGATCTTCTTGAGCTTTGACCTTCTCAAAGCCTaGAAGGGACCCTGTCCTCTCTTCCTTCTCCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: PQIFLSFDLLKA*KGPCPLFLLQR Trigger: CCTCTGGAGAAGGAAGAGAGGACAGGGTCCCTTCCAGGCTTTGAGAAGGTCAAAGCTCAAGAAGATCTGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000433869.1 ENST00000654104.1 ENST00000658822.1 ENST00000663115.1 |
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| CDS TCA 72 bp | CCCAATGGGGCTGGACTAGATAACCTCAGATCTTCTTaGGCTTTGACCTTCTCAAAGCCTGGAAGGGACCCT | + |
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Preference number: 6 (lower is better) Translates to: PNGAGLDNLRSS*ALTFSKPGRDP Trigger: AGGGTCCCTTCCAGGCTTTGAGAAGGTCAAAGCTCAAGAAGATCTGAGGTTATCTAGTCCAGCCCCATTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000433869.1 ENST00000654104.1 ENST00000658822.1 ENST00000663115.1 |
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