RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ERLIN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000107566

Ensembl transcript IDs: ENST00000370408.2, ENST00000407654.7, ENST00000421367.7

Found 210 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTGGCTGCCCAGGACGTCAGTGGAATCCTGATCTCCTGGGGGAGGTaGCAGCTGGAGAAACAACTTGGATTTAAGCATCTCTGGGCCAGG +
Preference number: 1 (lower is better)
Translates to: LAAQDVSGILISWGR*QLEKQLGFKHLWAR
Trigger: CCTGGCCCAGAGATGCTTAAATCCAAGTTGTTTCTCCAGCTGTCACCTCCCCCAGGAGATCAGGATTCCACTGACGTCCTGGGCAGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR CCA 90 bp CTGGGGAACTTCAGCGGCCTGGATCTTAATCACATGGATGAAGGCTaGGACTGGATCCCAAAGAAAGGGCCTGGGTCCCAGGTGCAATCA +
Preference number: 1 (lower is better)
Translates to: LGNFSGLDLNHMDEG*DWIPKKGPGSQVQS
Trigger: TGATTGCACCTGGGACCCAGGCCCTTTCTTTGGGATCCAGTCCCAGCCTTCATCCATGTGATTAAGATCCAGGCCGCTGAAGTTCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR CCA 90 bp AACTTCAGCGGCCTGGATCTTAATCACATGGATGAAGGCTGGGACTaGATCCCAAAGAAAGGGCCTGGGTCCCAGGTGCAATCAGTCTTC +
Preference number: 1 (lower is better)
Translates to: NFSGLDLNHMDEGWD*IPKKGPGSQVQSVF
Trigger: GAAGACTGATTGCACCTGGGACCCAGGCCCTTTCTTTGGGATCCAGTCCCAGCCTTCATCCATGTGATTAAGATCCAGGCCGCTGAAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR CCA 90 bp AAGATCATTTCCTGGGGAACTTCAGCGGCCTGGATCTTAATCACATaGATGAAGGCTGGGACTGGATCCCAAAGAAAGGGCCTGGGTCCC +
Preference number: 1 (lower is better)
Translates to: KIISWGTSAAWILIT*MKAGTGSQRKGLGP
Trigger: GGGACCCAGGCCCTTTCTTTGGGATCCAGTCCCAGCCTTCATCCATGTGATTAAGATCCAGGCCGCTGAAGTTCCCCAGGAAATGATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR CCA 90 bp TACAAGGAGGTGGCTGTGGCTAAAACCAGGTACCTTAGTCAAGCATaGCCTGCGGCAGTGATGCTGACAGTCATCAACCCAATGCAGGGA +
Preference number: 1 (lower is better)
Translates to: YKEVAVAKTRYLSQA*PAAVMLTVINPMQG
Trigger: TCCCTGCATTGGGTTGATGACTGTCAGCATCACTGCCGCAGGCCATGCTTGACTAAGGTACCTGGTTTTAGCCACAGCCACCTCCTTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR GCA 90 bp TGGTTGGGTAGCAAAGCTCAGGTCCCTGCAGGCCACCACCCTGACTaGAGGAAAACAGAAAGGTGCAAATCGTATCAAGTAAAAGGTTGC +
Preference number: 1 (lower is better)
Translates to: WLGSKAQVPAGHHPD*RKTERCKSYQVKGC
Trigger: GCAACCTTTTACTTGATACGATTTGCACCTTTCTGTTTTCCTGCAGTCAGGGTGGTGGCCTGCAGGGACCTGAGCTTTGCTACCCAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR CCA 90 bp CTTGATAAGACTGTGGCTGAAAAGACCATTTGTGTGTCAGACAGCTaGCTCTATCCTCCAATCAGTGGAGCACCCAGGACTATCGCAGGA +
Preference number: 1 (lower is better)
Translates to: LDKTVAEKTICVSDS*LYPPISGAPRTIAG
Trigger: TCCTGCGATAGTCCTGGGTGCTCCACTGATTGGAGGATAGAGCCAGCTGTCTGACACACAAATGGTCTTTTCAGCCACAGTCTTATCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
3UTR CCA 90 bp AGGTTGCTCAAGTGGAAGATCATTTCCTGGGGAACTTCAGCGGCCTaGATCTTAATCACATGGATGAAGGCTGGGACTGGATCCCAAAGA +
Preference number: 1 (lower is better)
Translates to: RLLKWKIISWGTSAA*ILITWMKAGTGSQR
Trigger: TCTTTGGGATCCAGTCCCAGCCTTCATCCATGTGATTAAGATCCAGGCCGCTGAAGTTCCCCAGGAAATGATCTTCCACTTGAGCAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR TCA 90 bp TGCTCCTATTTGTGGTTAAAACCCTGTCCCACTCTTGGCCAGAGCTaGAAGGTAACATACAAGGAGGTGGCTGTGGCTAAAACCAGGTAC +
Preference number: 1 (lower is better)
Translates to: CSYLWLKPCPTLGQS*KVTYKEVAVAKTRY
Trigger: GTACCTGGTTTTAGCCACAGCCACCTCCTTGTATGTTACCTTTCAGCTCTGGCCAAGAGTGGGACAGGGTTTTAACCACAAATAGGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR CCA 90 bp GAATACAAGAAACTAGTGATTAGGAATCTCTATGAGGAATCTGGTTaGGTAGCAAAGCTCAGGTCCCTGCAGGCCACCACCCTGACTGCA +
Preference number: 1 (lower is better)
Translates to: EYKKLVIRNLYEESG*VAKLRSLQATTLTA
Trigger: TGCAGTCAGGGTGGTGGCCTGCAGGGACCTGAGCTTTGCTACCCAACCAGATTCCTCATAGAGATTCCTAATCACTAGTTTCTTGTATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR CCA 90 bp TGTTTCTCATGGAAAATTAAATTCACTGGCTGCCCAGGACGTCAGTaGAATCCTGATCTCCTGGGGGAGGTGACAGCTGGAGAAACAACT +
Preference number: 1 (lower is better)
Translates to: CFSWKIKFTGCPGRQ*NPDLLGEVTAGETT
Trigger: AGTTGTTTCTCCAGCTGTCACCTCCCCCAGGAGATCAGGATTCCACTGACGTCCTGGGCAGCCAGTGAATTTAATTTTCCATGAGAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR GCA 90 bp CAGGTCCCTGCAGGCCACCACCCTGACTGCAGGAAAACAGAAAGGTaGAAATCGTATCAAGTAAAAGGTTGCTCAAGTGGAAGATCATTT +
Preference number: 1 (lower is better)
Translates to: QVPAGHHPDCRKTER*KSYQVKGCSSGRSF
Trigger: AAATGATCTTCCACTTGAGCAACCTTTTACTTGATACGATTTGCACCTTTCTGTTTTCCTGCAGTCAGGGTGGTGGCCTGCAGGGACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR TCA 90 bp GCAATCAGTCTTCTTGAACTTACCATCTCCTTCTCAGTCATCTCTTaGATGGTGGCTGAGCATACATTTCCCCGGGGGACGAATGTAAAC +
Preference number: 1 (lower is better)
Translates to: AISLLELTISFSVIS*MVAEHTFPRGTNVN
Trigger: GTTTACATTCGTCCCCCGGGGAAATGTATGCTCAGCCACCATTCAAGAGATGACTGAGAAGGAGATGGTAAGTTCAAGAAGACTGATTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR GCA 90 bp TTGTTGAGCTTCAACATAGCGTACACAAGAGTTGTCTTAACAAGCTaGACAAACTCAGGCCGAACTACGCAGCACACTGCTCCAGAAAAG +
Preference number: 1 (lower is better)
Translates to: LLSFNIAYTRVVLTS*TNSGRTTQHTAPEK
Trigger: CTTTTCTGGAGCAGTGTGCTGCGTAGTTCGGCCTGAGTTTGTGCAGCTTGTTAAGACAACTCTTGTGTACGCTATGTTGAAGCTCAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR GCA 90 bp AATTATGATACAATACTGTGCAGCAAGTCACTAGGAATTGCATGCTaGTCCTATTTGTGGTTAAAACCCTGTCCCACTCTTGGCCAGAGC +
Preference number: 1 (lower is better)
Translates to: NYDTILCSKSLGIAC*SYLWLKPCPTLGQS
Trigger: GCTCTGGCCAAGAGTGGGACAGGGTTTTAACCACAAATAGGAGCAGCATGCAATTCCTAGTGACTTGCTGCACAGTATTGTATCATAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR CCA 90 bp CAAATCGTATCAAGTAAAAGGTTGCTCAAGTGGAAGATCATTTCCTaGGGAACTTCAGCGGCCTGGATCTTAATCACATGGATGAAGGCT +
Preference number: 1 (lower is better)
Translates to: QIVSSKRLLKWKIIS*GTSAAWILITWMKA
Trigger: AGCCTTCATCCATGTGATTAAGATCCAGGCCGCTGAAGTTCCCCAGGAAATGATCTTCCACTTGAGCAACCTTTTACTTGATACGATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR GCA 90 bp TGTAATTATGATACAATACTGTGCAGCAAGTCACTAGGAATTGCATaGTGCTCCTATTTGTGGTTAAAACCCTGTCCCACTCTTGGCCAG +
Preference number: 1 (lower is better)
Translates to: CNYDTILCSKSLGIA*CSYLWLKPCPTLGQ
Trigger: CTGGCCAAGAGTGGGACAGGGTTTTAACCACAAATAGGAGCAGCATGCAATTCCTAGTGACTTGCTGCACAGTATTGTATCATAATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR-3UTR TCA 90 bp TTGCCAAAAGGAACACCCCGAAAGACGGCCAGCCTCAGAGCTGAGAGGGCACAGACGTCAGTGGAATCCTaGTCTCCTGGGGGAGGTGAC +
Preference number: 2 (lower is better)
Translates to: LPKGTPRKTASLRAERAQTSVES*SPGGGD
Trigger: GTCACCTCCCCCAGGAGATCAGGATTCCACTGACGT...CTGTGCCCTCTCAGCTCTGAGGCTGGCCGTCTTTCGGGGTGTTCCTTTTGGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR-3UTR CCA 90 bp TTGCCAAAAGGAACACCCCGAAAGACGGCCAGCCTCAGAGCTGAGAGGGCACAGAAGGCCCCAGAGCTTTaGCTCAGAGCAAAGGTTTCA +
Preference number: 2 (lower is better)
Translates to: LPKGTPRKTASLRAERAQKAPEL*LRAKVS
Trigger: TGAAACCTTTGCTCTGAGCCAAAGCTCTGGGGCCTT...CTGTGCCCTCTCAGCTCTGAGGCTGGCCGTCTTTCGGGGTGTTCCTTTTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR-3UTR TCA 90 bp GGGAACTTCAGCGGCCTGGATCTTAATCACATGGATGAAGGCTGGGACTGGATCCTCTTGAATGGTGGCTaGGCATACATTTCCCCGGGG +
Preference number: 2 (lower is better)
Translates to: GNFSGLDLNHMDEGWDWILLNGG*AYISPG
Trigger: CCCCGGGGAAATGTATGCTCAGCCACCATTCAAGAG...GATCCAGTCCCAGCCTTCATCCATGTGATTAAGATCCAGGCCGCTGAAGTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR-3UTR TCA 90 bp GGTAGCAAAGCTCAGGTCCCTGCAGGCCACCACCCTGACTGCAGGAAAACAGAACCTTGGGCCACATCTTaGTATGGAGAACATTTCCAC +
Preference number: 2 (lower is better)
Translates to: GSKAQVPAGHHPDCRKTEPWATS*YGEHFH
Trigger: GTGGAAATGTTCTCCATATCAAGATGTGGCCCAAGG...TTCTGTTTTCCTGCAGTCAGGGTGGTGGCCTGCAGGGACCTGAGCTTTGCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR-3UTR CCA 90 bp GCTAAAACCAGGTACCTTAGTCAAGCATGGCCTGCGGCAGTGATGCTGACAGTCCTATCCTCCAATCAGTaGAGCACCCAGGACTATCGC +
Preference number: 2 (lower is better)
Translates to: AKTRYLSQAWPAAVMLTVLSSNQ*STQDYR
Trigger: GCGATAGTCCTGGGTGCTCCACTGATTGGAGGATAG...GACTGTCAGCATCACTGCCGCAGGCCATGCTTGACTAAGGTACCTGGTTTTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR-3UTR TCA 90 bp GCTCTATCCTCCAATCAGTGGAGCACCCAGGACTATCGCAGGAGAGGTGGAACACCTTGGGCCACATCTTaGTATGGAGAACATTTCCAC +
Preference number: 2 (lower is better)
Translates to: ALSSNQWSTQDYRRRGGTPWATS*YGEHFH
Trigger: GTGGAAATGTTCTCCATATCAAGATGTGGCCCAAGG...TGTTCCACCTCTCCTGCGATAGTCCTGGGTGCTCCACTGATTGGAGGATAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
3UTR-3UTR GCA 90 bp GGGCTCCAGATAAACAATCTTAAGGAGCATCAGTGTGCTTGTGACCATGGCAGCGGCCACCACCCTGACTaGAGGAAAACAGAAAGGTGC +
Preference number: 2 (lower is better)
Translates to: GLQINNLKEHQCACDHGSGHHPD*RKTERC
Trigger: GCACCTTTCTGTTTTCCTGCAGTCAGGGTGGTGGCC...GCTGCCATGGTCACAAGCACACTGATGCTCCTTAAGATTGTTTATCTGGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR-3UTR CCA 90 bp TGGGCCAGGTGGGAAGGAGACAATGATGACCAAGGATGCTTTCTAGGTGACTTTCCCAAAGAAAGGGCCTaGGTCCCAGGTGCAATCAGT +
Preference number: 2 (lower is better)
Translates to: WARWEGDNDDQGCFLGDFPKERA*VPGAIS
Trigger: ACTGATTGCACCTGGGACCCAGGCCCTTTCTTTGGG...AAAGTCACCTAGAAAGCATCCTTGGTCATCATTGTCTCCTTCCCACCTGGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR-3UTR TCA 90 bp GGGAACTTCAGCGGCCTGGATCTTAATCACATGGATGAAGGCTGGGACTGGATCTTCTCAGTCATCTCTTaGATGGTGGCTGAGCATACA +
Preference number: 2 (lower is better)
Translates to: GNFSGLDLNHMDEGWDWIFSVIS*MVAEHT
Trigger: TGTATGCTCAGCCACCATTCAAGAGATGACTGAGAA...GATCCAGTCCCAGCCTTCATCCATGTGATTAAGATCCAGGCCGCTGAAGTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR-3UTR CCA 90 bp GGGAGGCACACTCCTCACACATGGGAGTTTAAGCAGAAGTGCTTTAAGACTTCAGATGAAGGCTGGGACTaGATCCCAAAGAAAGGGCCT +
Preference number: 2 (lower is better)
Translates to: GRHTPHTWEFKQKCFKTSDEGWD*IPKKGP
Trigger: AGGCCCTTTCTTTGGGATCCAGTCCCAGCCTTCATC...TGAAGTCTTAAAGCACTTCTGCTTAAACTCCCATGTGTGAGGAGTGTGCCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR-3UTR CCA 90 bp GGGAGGCACACTCCTCACACATGGGAGTTTAAGCAGAAGTGCTTTAAGACTTCAGGATTTAAGCATCTCTaGGCCAGGTGGGAAGGAGAC +
Preference number: 2 (lower is better)
Translates to: GRHTPHTWEFKQKCFKTSGFKHL*ARWEGD
Trigger: GTCTCCTTCCCACCTGGCCCAGAGATGCTTAAATCC...TGAAGTCTTAAAGCACTTCTGCTTAAACTCCCATGTGTGAGGAGTGTGCCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR-3UTR TCA 90 bp TGGGCCAGGTGGGAAGGAGACAATGATGACCAAGGATGCTTTCTAGGTGACTTTACTCTTGGCCAGAGCTaGAAGGTAACATACAAGGAG +
Preference number: 2 (lower is better)
Translates to: WARWEGDNDDQGCFLGDFTLGQS*KVTYKE
Trigger: CTCCTTGTATGTTACCTTTCAGCTCTGGCCAAGAGT...AAAGTCACCTAGAAAGCATCCTTGGTCATCATTGTCTCCTTCCCACCTGGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR-3UTR CCA 90 bp CAGAGCTTTGGCTCAGAGCAAAGGTTTCATCTCACCCCAACTTCAAACCAAGCCGGAACTTCAGCGGCCTaGATCTTAATCACATGGATG +
Preference number: 2 (lower is better)
Translates to: QSFGSEQRFHLTPTSNQAGTSAA*ILITWM
Trigger: CATCCATGTGATTAAGATCCAGGCCGCTGAAGTTCC...GGCTTGGTTTGAAGTTGGGGTGAGATGAAACCTTTGCTCTGAGCCAAAGCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR-3UTR GCA 90 bp GCTAAAACCAGGTACCTTAGTCAAGCATGGCCTGCGGCAGTGATGCTGACAGTCTGTTTAACATTCCAGTaGAGGCAGTATCTTAGCATC +
Preference number: 2 (lower is better)
Translates to: AKTRYLSQAWPAAVMLTVCLTFQ*RQYLSI
Trigger: GATGCTAAGATACTGCCTGCACTGGAATGTTAAACA...GACTGTCAGCATCACTGCCGCAGGCCATGCTTGACTAAGGTACCTGGTTTTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR-3UTR CCA 90 bp AGACCATTTGTGTGTCAGACAGCTGGCTCTATCCTCCAATCAGTGGAGCACCCAGGCCACATCTTGATATaGAGAACATTTCCACCTCTT +
Preference number: 2 (lower is better)
Translates to: RPFVCQTAGSILQSVEHPGHILI*RTFPPL
Trigger: AAGAGGTGGAAATGTTCTCCATATCAAGATGTGGCC...TGGGTGCTCCACTGATTGGAGGATAGAGCCAGCTGTCTGACACACAAATGGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
3UTR-3UTR GCA 90 bp ACAGGGAGGCACACTCCTCACACATGGGAGTTTAAGCAGAAGTGCTTTAAGACTATTAAATTCACTGGCTaGCCAGGACGTCAGTGGAAT +
Preference number: 2 (lower is better)
Translates to: TGRHTPHTWEFKQKCFKTIKFTG*PGRQWN
Trigger: ATTCCACTGACGTCCTGGGCAGCCAGTGAATTTAAT...AGTCTTAAAGCACTTCTGCTTAAACTCCCATGTGTGAGGAGTGTGCCTCCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR-3UTR CCA 90 bp CAGAGCTTTGGCTCAGAGCAAAGGTTTCATCTCACCCCAACTTCAAACCAAGCCGGCCACATCTTGATATaGAGAACATTTCCACCTCTT +
Preference number: 2 (lower is better)
Translates to: QSFGSEQRFHLTPTSNQAGHILI*RTFPPL
Trigger: AAGAGGTGGAAATGTTCTCCATATCAAGATGTGGCC...GGCTTGGTTTGAAGTTGGGGTGAGATGAAACCTTTGCTCTGAGCCAAAGCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR-3UTR CCA 90 bp GAAGATCATTTCCTGGGGAACTTCAGCGGCCTGGATCTTAATCACATGGATGAATGTGTGTCAGACAGCTaGCTCTATCCTCCAATCAGT +
Preference number: 2 (lower is better)
Translates to: EDHFLGNFSGLDLNHMDECVSDS*LYPPIS
Trigger: ACTGATTGGAGGATAGAGCCAGCTGTCTGACACACA...TTCATCCATGTGATTAAGATCCAGGCCGCTGAAGTTCCCCAGGAAATGATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR-3UTR CCA 90 bp GGGAGGCACACTCCTCACACATGGGAGTTTAAGCAGAAGTGCTTTAAGACTTCATCATCTCTTGAATGGTaGCTGAGCATACATTTCCCC +
Preference number: 2 (lower is better)
Translates to: GRHTPHTWEFKQKCFKTSSSLEW*LSIHFP
Trigger: GGGGAAATGTATGCTCAGCCACCATTCAAGAGATGA...TGAAGTCTTAAAGCACTTCTGCTTAAACTCCCATGTGTGAGGAGTGTGCCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR-3UTR TCA 90 bp CACAAGAGTTGTCTTAACAAGCTGCACAAACTCAGGCCGAACTACGCAGCACACAGGATGCTTTCTAGGTaGCTTTTTGTTCCACACTAT +
Preference number: 2 (lower is better)
Translates to: HKSCLNKLHKLRPNYAAHRMLSR*LFVPHY
Trigger: ATAGTGTGGAACAAAAAGTCACCTAGAAAGCATCCT...GTGTGCTGCGTAGTTCGGCCTGAGTTTGTGCAGCTTGTTAAGACAACTCTTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR-3UTR TCA 90 bp GGGAGGCACACTCCTCACACATGGGAGTTTAAGCAGAAGTGCTTTAAGACTTCAAAGCACAGAGGTCAATaGTCCAGATTTTCCACAACA +
Preference number: 2 (lower is better)
Translates to: GRHTPHTWEFKQKCFKTSKHRGQ*SRFSTT
Trigger: TGTTGTGGAAAATCTGGATCATTGACCTCTGTGCTT...TGAAGTCTTAAAGCACTTCTGCTTAAACTCCCATGTGTGAGGAGTGTGCCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR-3UTR GCA 90 bp ACAGGGAGGCACACTCCTCACACATGGGAGTTTAAGCAGAAGTGCTTTAAGACTTCTCCATATTACAAATaGCTCTATAGGATAAGGCCC +
Preference number: 2 (lower is better)
Translates to: TGRHTPHTWEFKQKCFKTSPYYK*LYRIRP
Trigger: GGGCCTTATCCTATAGAGGCATTTGTAATATGGAGA...AGTCTTAAAGCACTTCTGCTTAAACTCCCATGTGTGAGGAGTGTGCCTCCCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR-3UTR CCA 90 bp CTTTCCCAAATAAAGTGTTTGGCACAACCAACAAACTGTCATGAGACTGACAGGCACATGGATGAAGGCTaGGACTGGATCCCAAAGAAA +
Preference number: 2 (lower is better)
Translates to: LSQIKCLAQPTNCHETDRHMDEG*DWIPKK
Trigger: TTTCTTTGGGATCCAGTCCCAGCCTTCATCCATGTG...CCTGTCAGTCTCATGACAGTTTGTTGGTTGTGCCAAACACTTTATTTGGGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR-3UTR CCA 90 bp GAGGTCAATGATCCAGATTTTCCACAACAATCATCTGCAGCAACAATTCGACAGTGGATCTTAATCACATaGATGAAGGCTGGGACTGGA +
Preference number: 2 (lower is better)
Translates to: EVNDPDFPQQSSAATIRQWILIT*MKAGTG
Trigger: TCCAGTCCCAGCCTTCATCCATGTGATTAAGATCCA...CTGTCGAATTGTTGCTGCAGATGATTGTTGTGGAAAATCTGGATCATTGACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR-3UTR CCA 90 bp CTTAGCATCAGACTTTCCTCATTCATGAGTAGCAGTTTAGAAAGGAATACATATCTATCCTCCAATCAGTaGAGCACCCAGGACTATCGC +
Preference number: 2 (lower is better)
Translates to: LSIRLSSFMSSSLERNTYLSSNQ*STQDYR
Trigger: GCGATAGTCCTGGGTGCTCCACTGATTGGAGGATAG...ATATGTATTCCTTTCTAAACTGCTACTCATGAATGAGGAAAGTCTGATGCTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
3UTR-3UTR CCA 90 bp CTTTCCCAAATAAAGTGTTTGGCACAACCAACAAACTGTCATGAGACTGACAGGTTGTTCCACACTATGTaGGCTCCAGATAAACAATCT +
Preference number: 2 (lower is better)
Translates to: LSQIKCLAQPTNCHETDRLFHTM*APDKQS
Trigger: AGATTGTTTATCTGGAGCCCACATAGTGTGGAACAA...CCTGTCAGTCTCATGACAGTTTGTTGGTTGTGCCAAACACTTTATTTGGGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR CCA 72 bp TTCAGCGGCCTGGATCTTAATCACATGGATGAAGGCTaGGACTGGATCCCAAAGAAAGGGCCTGGGTCCCAG +
Preference number: 3 (lower is better)
Translates to: FSGLDLNHMDEG*DWIPKKGPGSQ
Trigger: CTGGGACCCAGGCCCTTTCTTTGGGATCCAGTCCCAGCCTTCATCCATGTGATTAAGATCCAGGCCGCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR-3UTR CAA 90 bp GGCTCTATCCTCCAATCAGTGGAGCACCCAGGACTATCGCAGGAGAGGTGGAACTTCCCACTTAACCCCTaGGGCCACATCTTGATATGG +
Preference number: 3 (lower is better)
Translates to: GSILQSVEHPGLSQERWNFPLNP*GHILIW
Trigger: CCATATCAAGATGTGGCCCAAGGGGTTAAGTGGGAA...GTTCCACCTCTCCTGCGATAGTCCTGGGTGCTCCACTGATTGGAGGATAGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
3UTR CCA 72 bp TTGTGTGTCAGACAGCTGGCTCTATCCTCCAATCAGTaGAGCACCCAGGACTATCGCAGGAGAGGTGGAACA +
Preference number: 3 (lower is better)
Translates to: LCVRQLALSSNQ*STQDYRRRGGT
Trigger: TGTTCCACCTCTCCTGCGATAGTCCTGGGTGCTCCACTGATTGGAGGATAGAGCCAGCTGTCTGACACACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
3UTR CCA 72 bp TCCTGGGGAACTTCAGCGGCCTGGATCTTAATCACATaGATGAAGGCTGGGACTGGATCCCAAAGAAAGGGC +
Preference number: 3 (lower is better)
Translates to: SWGTSAAWILIT*MKAGTGSQRKG
Trigger: GCCCTTTCTTTGGGATCCAGTCCCAGCCTTCATCCATGTGATTAAGATCCAGGCCGCTGAAGTTCCCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR CCA 72 bp GTGGCTGTGGCTAAAACCAGGTACCTTAGTCAAGCATaGCCTGCGGCAGTGATGCTGACAGTCATCAACCCA +
Preference number: 3 (lower is better)
Translates to: VAVAKTRYLSQA*PAAVMLTVINP
Trigger: TGGGTTGATGACTGTCAGCATCACTGCCGCAGGCCATGCTTGACTAAGGTACCTGGTTTTAGCCACAGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR CCA 72 bp TGGAAAATTAAATTCACTGGCTGCCCAGGACGTCAGTaGAATCCTGATCTCCTGGGGGAGGTGACAGCTGGA +
Preference number: 3 (lower is better)
Translates to: WKIKFTGCPGRQ*NPDLLGEVTAG
Trigger: TCCAGCTGTCACCTCCCCCAGGAGATCAGGATTCCACTGACGTCCTGGGCAGCCAGTGAATTTAATTTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR-3UTR CAA 90 bp ACCATTTGTGTGTCAGACAGCTGGCTCTATCCTCCAATCAGTGGAGCACCCAGGCCCTTGGGCCACATCTaGATATGGAGAACATTTCCA +
Preference number: 3 (lower is better)
Translates to: TICVSDSWLYPPISGAPRPLGHI*IWRTFP
Trigger: TGGAAATGTTCTCCATATCAAGATGTGGCCCAAGGG...CCTGGGTGCTCCACTGATTGGAGGATAGAGCCAGCTGTCTGACACACAAATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
3UTR-3UTR CAA 90 bp GGGAGGCACACTCCTCACACATGGGAGTTTAAGCAGAAGTGCTTTAAGACTTCATCCAGGGCCATCACTTaGGGGCAACAGCTTTTGCTC +
Preference number: 3 (lower is better)
Translates to: GRHTPHTWEFKQKCFKTSSRAIT*GQQLLL
Trigger: GAGCAAAAGCTGTTGCCCCAAAGTGATGGCCCTGGA...TGAAGTCTTAAAGCACTTCTGCTTAAACTCCCATGTGTGAGGAGTGTGCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR CCA 72 bp ACTGTGGCTGAAAAGACCATTTGTGTGTCAGACAGCTaGCTCTATCCTCCAATCAGTGGAGCACCCAGGACT +
Preference number: 3 (lower is better)
Translates to: TVAEKTICVSDS*LYPPISGAPRT
Trigger: AGTCCTGGGTGCTCCACTGATTGGAGGATAGAGCCAGCTGTCTGACACACAAATGGTCTTTTCAGCCACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
3UTR CCA 72 bp AAGTGGAAGATCATTTCCTGGGGAACTTCAGCGGCCTaGATCTTAATCACATGGATGAAGGCTGGGACTGGA +
Preference number: 3 (lower is better)
Translates to: KWKIISWGTSAA*ILITWMKAGTG
Trigger: TCCAGTCCCAGCCTTCATCCATGTGATTAAGATCCAGGCCGCTGAAGTTCCCCAGGAAATGATCTTCCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR CCA 72 bp CTGCTCCTATTTGTGGTTAAAACCCTGTCCCACTCTTaGCCAGAGCTGAAAGGTAACATACAAGGAGGTGGC +
Preference number: 3 (lower is better)
Translates to: LLLFVVKTLSHS*PELKGNIQGGG
Trigger: GCCACCTCCTTGTATGTTACCTTTCAGCTCTGGCCAAGAGTGGGACAGGGTTTTAACCACAAATAGGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR GCA 72 bp AGGCACACTCCTCACACATGGGAGTTTAAGCAGAAGTaGTTTAAGACTTCACAGCGGCATTTCCCTGTTCCT +
Preference number: 3 (lower is better)
Translates to: RHTPHTWEFKQK*FKTSQRHFPVP
Trigger: AGGAACAGGGAAATGCCGCTGTGAAGTCTTAAAGCACTTCTGCTTAAACTCCCATGTGTGAGGAGTGTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR-3UTR CAA 90 bp GAAAAGACCATTTGTGTGTCAGACAGCTGGCTCTATCCTCCAATCAGTGGAGCACCCTTGGGCCACATCTaGATATGGAGAACATTTCCA +
Preference number: 3 (lower is better)
Translates to: EKTICVSDSWLYPPISGAPLGHI*IWRTFP
Trigger: TGGAAATGTTCTCCATATCAAGATGTGGCCCAAGGG...TGCTCCACTGATTGGAGGATAGAGCCAGCTGTCTGACACACAAATGGTCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
3UTR GCA 72 bp TTCAACATAGCGTACACAAGAGTTGTCTTAACAAGCTaGACAAACTCAGGCCGAACTACGCAGCACACTGCT +
Preference number: 3 (lower is better)
Translates to: FNIAYTRVVLTS*TNSGRTTQHTA
Trigger: AGCAGTGTGCTGCGTAGTTCGGCCTGAGTTTGTGCAGCTTGTTAAGACAACTCTTGTGTACGCTATGTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR CCA 72 bp TCAAGTAAAAGGTTGCTCAAGTGGAAGATCATTTCCTaGGGAACTTCAGCGGCCTGGATCTTAATCACATGG +
Preference number: 3 (lower is better)
Translates to: SSKRLLKWKIIS*GTSAAWILITW
Trigger: CCATGTGATTAAGATCCAGGCCGCTGAAGTTCCCCAGGAAATGATCTTCCACTTGAGCAACCTTTTACTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR GCA 72 bp ACAATACTGTGCAGCAAGTCACTAGGAATTGCATGCTaGTCCTATTTGTGGTTAAAACCCTGTCCCACTCTT +
Preference number: 3 (lower is better)
Translates to: TILCSKSLGIAC*SYLWLKPCPTL
Trigger: AAGAGTGGGACAGGGTTTTAACCACAAATAGGAGCAGCATGCAATTCCTAGTGACTTGCTGCACAGTATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR-3UTR CAA 90 bp GAGGTCAATGATCCAGATTTTCCACAACAATCATCTGCAGCAACAATTCGACAGGGTCCCATGACTTTTTaGTTGAGCTTCAACATAGCG +
Preference number: 3 (lower is better)
Translates to: EVNDPDFPQQSSAATIRQGPMTF*LSFNIA
Trigger: CGCTATGTTGAAGCTCAACAAAAAAGTCATGGGACC...CTGTCGAATTGTTGCTGCAGATGATTGTTGTGGAAAATCTGGATCATTGACCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR-3UTR CAA 90 bp CTTAGCATCAGACTTTCCTCATTCATGAGTAGCAGTTTAGAAAGGAATACATATTTCCCACTTAACCCCTaGGGCCACATCTTGATATGG +
Preference number: 3 (lower is better)
Translates to: LSIRLSSFMSSSLERNTYFPLNP*GHILIW
Trigger: CCATATCAAGATGTGGCCCAAGGGGTTAAGTGGGAA...ATATGTATTCCTTTCTAAACTGCTACTCATGAATGAGGAAAGTCTGATGCTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
CDS-3UTR TCA 90 bp GCTCTATCCTCCAATCAGTGGAGCACCCAGGACTATCGCAGGAGAGGTGGAACACGTTCCTCCGATCAGTaGCGCATCGCCCCCGCCCGC +
Preference number: 4 (lower is better)
Translates to: ALSSNQWSTQDYRRRGGTRSSDQ*RIAPAR
Trigger: GCGGGCGGGGGCGATGCGTCACTGATCGGAGGAACG...TGTTCCACCTCTCCTGCGATAGTCCTGGGTGCTCCACTGATTGGAGGATAGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407654.7
CDS-3UTR TCA 90 bp GCTCTATCCTCCAATCAGTGGAGCACCCAGGACTATCGCAGGAGAGGTGGAACACGCTCTCTCGCAGGCTaGGCCGGGGAGTCCAGTACC +
Preference number: 4 (lower is better)
Translates to: ALSSNQWSTQDYRRRGGTRSLAG*AGESST
Trigger: GGTACTGGACTCCCCGGCTCAGCCTGCGAGAGAGCG...TGTTCCACCTCTCCTGCGATAGTCCTGGGTGCTCCACTGATTGGAGGATAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR TCA 90 bp TGGGCCAGGTGGGAAGGAGACAATGATGACCAAGGATGCTTTCTAGGTGACTTTCGCCTCACCGATCAGTaGCGCATCGCCCCCGCCCGC +
Preference number: 4 (lower is better)
Translates to: WARWEGDNDDQGCFLGDFRLTDQ*RIAPAR
Trigger: GCGGGCGGGGGCGATGCGTCACTGATCGGTGAGGCG...AAAGTCACCTAGAAAGCATCCTTGGTCATCATTGTCTCCTTCCCACCTGGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR TCA 90 bp TGGGCCAGGTGGGAAGGAGACAATGATGACCAAGGATGCTTTCTAGGTGACTTTGGCCAGCCTCAGAGCTaGGAGGGCACAGGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: WARWEGDNDDQGCFLGDFGQPQS*EGTGRH
Trigger: GTGCCTCCCTGTGCCCTCTCAGCTCTGAGGCTGGCC...AAAGTCACCTAGAAAGCATCCTTGGTCATCATTGTCTCCTTCCCACCTGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR TCA 90 bp GGGAACTTCAGCGGCCTGGATCTTAATCACATGGATGAAGGCTGGGACTGGATCACGTCAGTGGAATCCTaGTCTCCTGGGGGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: GNFSGLDLNHMDEGWDWITSVES*SPGGGD
Trigger: GTCACCTCCCCCAGGAGATCAGGATTCCACTGACGT...GATCCAGTCCCAGCCTTCATCCATGTGATTAAGATCCAGGCCGCTGAAGTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR CCA 90 bp GCTCTATCCTCCAATCAGTGGAGCACCCAGGACTATCGCAGGAGAGGTGGAACACCTCAATCTTGTGGATaGAGGCGTAGAGCAGGACAG +
Preference number: 4 (lower is better)
Translates to: ALSSNQWSTQDYRRRGGTPQSCG*RRRAGQ
Trigger: CTGTCCTGCTCTACGCCTCCATCCACAAGATTGAGG...TGTTCCACCTCTCCTGCGATAGTCCTGGGTGCTCCACTGATTGGAGGATAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
CDS-3UTR CCA 90 bp GCTGTGGCTAAAACCAGGTACCTTAGTCAAGCATGGCCTGCGGCAGTGATGCTGCCAGGGCCATCACTTTaGGGCAACAGCTTTTGCTCA +
Preference number: 4 (lower is better)
Translates to: AVAKTRYLSQAWPAAVMLPGPSL*GNSFCS
Trigger: TGAGCAAAAGCTGTTGCCCCAAAGTGATGGCCCTGG...CAGCATCACTGCCGCAGGCCATGCTTGACTAAGGTACCTGGTTTTAGCCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR CCA 90 bp ACCATTTGTGTGTCAGACAGCTGGCTCTATCCTCCAATCAGTGGAGCACCCAGGCCTCAATCTTGTGGATaGAGGCGTAGAGCAGGACAG +
Preference number: 4 (lower is better)
Translates to: TICVSDSWLYPPISGAPRPQSCG*RRRAGQ
Trigger: CTGTCCTGCTCTACGCCTCCATCCACAAGATTGAGG...CCTGGGTGCTCCACTGATTGGAGGATAGAGCCAGCTGTCTGACACACAAATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
CDS-3UTR CCA 90 bp GGCTCTATCCTCCAATCAGTGGAGCACCCAGGACTATCGCAGGAGAGGTGGAACTGTGTGTCAGACAGCTaGCTCTATCCTCCAATCAGT +
Preference number: 4 (lower is better)
Translates to: GSILQSVEHPGLSQERWNCVSDS*LYPPIS
Trigger: ACTGATTGGAGGATAGAGCCAGCTGTCTGACACACA...GTTCCACCTCTCCTGCGATAGTCCTGGGTGCTCCACTGATTGGAGGATAGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
CDS-3UTR CCA 90 bp GGTAGCAAAGCTCAGGTCCCTGCAGGCCACCACCCTGACTGCAGGAAAACAGAATGTGTGTCAGACAGCTaGCTCTATCCTCCAATCAGT +
Preference number: 4 (lower is better)
Translates to: GSKAQVPAGHHPDCRKTECVSDS*LYPPIS
Trigger: ACTGATTGGAGGATAGAGCCAGCTGTCTGACACACA...TTCTGTTTTCCTGCAGTCAGGGTGGTGGCCTGCAGGGACCTGAGCTTTGCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR CCA 90 bp CACAAGAGTTGTCTTAACAAGCTGCACAAACTCAGGCCGAACTACGCAGCACACCTCATTCTTCCCTTCTaGCTGAGCCCGCTGACCCCT +
Preference number: 4 (lower is better)
Translates to: HKSCLNKLHKLRPNYAAHLILPF*LSPLTP
Trigger: AGGGGTCAGCGGGCTCAGCCAGAAGGGAAGAATGAG...GTGTGCTGCGTAGTTCGGCCTGAGTTTGTGCAGCTTGTTAAGACAACTCTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR CCA 90 bp GCTAAAACCAGGTACCTTAGTCAAGCATGGCCTGCGGCAGTGATGCTGACAGTCGATGAAGGCTGGGACTaGATCCCAAAGAAAGGGCCT +
Preference number: 4 (lower is better)
Translates to: AKTRYLSQAWPAAVMLTVDEGWD*IPKKGP
Trigger: AGGCCCTTTCTTTGGGATCCAGTCCCAGCCTTCATC...GACTGTCAGCATCACTGCCGCAGGCCATGCTTGACTAAGGTACCTGGTTTTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR TCA 90 bp GTGTGTCAGACAGCTGGCTCTATCCTCCAATCAGTGGAGCACCCAGGACTATCGACCAGAACCCGGGCTTaGGTCATATTCATTCTCGTT +
Preference number: 4 (lower is better)
Translates to: VCQTAGSILQSVEHPGLSTRTRA*VIFILV
Trigger: AACGAGAATGAATATGACTCAAGCCCGGGTTCTGGT...CGATAGTCCTGGGTGCTCCACTGATTGGAGGATAGAGCCAGCTGTCTGACACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
CDS-3UTR TCA 90 bp GCTCTATCCTCCAATCAGTGGAGCACCCAGGACTATCGCAGGAGAGGTGGAACAACTCTTGGCCAGAGCTaGAAGGTAACATACAAGGAG +
Preference number: 4 (lower is better)
Translates to: ALSSNQWSTQDYRRRGGTTLGQS*KVTYKE
Trigger: CTCCTTGTATGTTACCTTTCAGCTCTGGCCAAGAGT...TGTTCCACCTCTCCTGCGATAGTCCTGGGTGCTCCACTGATTGGAGGATAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR GCA 90 bp GCTCTATCCTCCAATCAGTGGAGCACCCAGGACTATCGCAGGAGAGGTGGAACATCCGGGGTCAACTTGTaGTTGTTTGAGGTGGCATAT +
Preference number: 4 (lower is better)
Translates to: ALSSNQWSTQDYRRRGGTSGVNL*LFEVAY
Trigger: ATATGCCACCTCAAACAAGCACAAGTTGACCCCGGA...TGTTCCACCTCTCCTGCGATAGTCCTGGGTGCTCCACTGATTGGAGGATAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
CDS-3UTR GCA 90 bp GTGTGTCAGACAGCTGGCTCTATCCTCCAATCAGTGGAGCACCCAGGACTATCGTCCGGGGTCAACTTGTaGTTGTTTGAGGTGGCATAT +
Preference number: 4 (lower is better)
Translates to: VCQTAGSILQSVEHPGLSSGVNL*LFEVAY
Trigger: ATATGCCACCTCAAACAAGCACAAGTTGACCCCGGA...CGATAGTCCTGGGTGCTCCACTGATTGGAGGATAGAGCCAGCTGTCTGACACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
CDS-3UTR GCA 90 bp TTGATAAGACTGTGGCTGAAAAGACCATTTGTGTGTCAGACAGCTGGCTCTATCCCAGTGGGCCGCCCCTaGTCGGTGAGCTTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: LIRLWLKRPFVCQTAGSIPVGRP*SVSFLK
Trigger: TTTCAGGAAGCTCACCGAGCAGGGGCGGCCCACTGG...GATAGAGCCAGCTGTCTGACACACAAATGGTCTTTTCAGCCACAGTCTTATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR CCA 90 bp GACAGCTGGAGAAACAACTTGGATTTAAGCATCTCTGGGCCAGGTGGGAAGGAGTGGAAGATCATTTCCTaGGGAACTTCAGCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: DSWRNNLDLSISGPGGKEWKIIS*GTSAAW
Trigger: CCAGGCCGCTGAAGTTCCCCAGGAAATGATCTTCCA...CTCCTTCCCACCTGGCCCAGAGATGCTTAAATCCAAGTTGTTTCTCCAGCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR TCA 90 bp GCTAAAACCAGGTACCTTAGTCAAGCATGGCCTGCGGCAGTGATGCTGACAGTCACCAGAACCCGGGCTTaGGTCATATTCATTCTCGTT +
Preference number: 4 (lower is better)
Translates to: AKTRYLSQAWPAAVMLTVTRTRA*VIFILV
Trigger: AACGAGAATGAATATGACTCAAGCCCGGGTTCTGGT...GACTGTCAGCATCACTGCCGCAGGCCATGCTTGACTAAGGTACCTGGTTTTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR TCA 90 bp ACCATTTGTGTGTCAGACAGCTGGCTCTATCCTCCAATCAGTGGAGCACCCAGGCCTTGGGCCACATCTTaGTATGGAGAACATTTCCAC +
Preference number: 4 (lower is better)
Translates to: TICVSDSWLYPPISGAPRPWATS*YGEHFH
Trigger: GTGGAAATGTTCTCCATATCAAGATGTGGCCCAAGG...CCTGGGTGCTCCACTGATTGGAGGATAGAGCCAGCTGTCTGACACACAAATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
CDS-3UTR TCA 90 bp TTGCCAAAAGGAACACCCCGAAAGACGGCCAGCCTCAGAGCTGAGAGGGCACAGAGGATGCTTTCTAGGTaGCTTTTTGTTCCACACTAT +
Preference number: 4 (lower is better)
Translates to: LPKGTPRKTASLRAERAQRMLSR*LFVPHY
Trigger: ATAGTGTGGAACAAAAAGTCACCTAGAAAGCATCCT...CTGTGCCCTCTCAGCTCTGAGGCTGGCCGTCTTTCGGGGTGTTCCTTTTGGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR TCA 90 bp GCTAAAACCAGGTACCTTAGTCAAGCATGGCCTGCGGCAGTGATGCTGACAGTCGACAGGCCTGACAGCTaGAAGATTTCTAGAAGTGGT +
Preference number: 4 (lower is better)
Translates to: AKTRYLSQAWPAAVMLTVDRPDS*KISRSG
Trigger: ACCACTTCTAGAAATCTTTCAGCTGTCAGGCCTGTC...GACTGTCAGCATCACTGCCGCAGGCCATGCTTGACTAAGGTACCTGGTTTTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR GCA 90 bp GGCTCTATCCTCCAATCAGTGGAGCACCCAGGACTATCGCAGGAGAGGTGGAACAACATTTCCACCTCTTaGATCAACCTGTGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: GSILQSVEHPGLSQERWNNISTS*INLCSL
Trigger: AAGAGAGCACAGGTTGATGCAAGAGGTGGAAATGTT...GTTCCACCTCTCCTGCGATAGTCCTGGGTGCTCCACTGATTGGAGGATAGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
CDS-3UTR GCA 90 bp AAGCATCTCTGGGCCAGGTGGGAAGGAGACAATGATGACCAAGGATGCTTTCTACAGTCATCAACCCAATaGAGGGAATGCAAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: KHLWARWEGDNDDQGCFLQSSTQ*RECKAP
Trigger: TGGGGCCTTGCATTCCCTGCATTGGGTTGATGACTG...TAGAAAGCATCCTTGGTCATCATTGTCTCCTTCCCACCTGGCCCAGAGATGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR GCA 90 bp GCTGTGGCTAAAACCAGGTACCTTAGTCAAGCATGGCCTGCGGCAGTGATGCTGGTTGTCTTAACAAGCTaGACAAACTCAGGCCGAACT +
Preference number: 4 (lower is better)
Translates to: AVAKTRYLSQAWPAAVMLVVLTS*TNSGRT
Trigger: AGTTCGGCCTGAGTTTGTGCAGCTTGTTAAGACAAC...CAGCATCACTGCCGCAGGCCATGCTTGACTAAGGTACCTGGTTTTAGCCACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR CCA 90 bp CACAAGAGTTGTCTTAACAAGCTGCACAAACTCAGGCCGAACTACGCAGCACACCTATCCTCCAATCAGTaGAGCACCCAGGACTATCGC +
Preference number: 4 (lower is better)
Translates to: HKSCLNKLHKLRPNYAAHLSSNQ*STQDYR
Trigger: GCGATAGTCCTGGGTGCTCCACTGATTGGAGGATAG...GTGTGCTGCGTAGTTCGGCCTGAGTTTGTGCAGCTTGTTAAGACAACTCTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR CCA 90 bp GATAAGACTGTGGCTGAAAAGACCATTTGTGTGTCAGACAGCTGGCTCTATCCTAGGGTCGCTCCCGGGTaGAAGGCACTAACTGAGAAG +
Preference number: 4 (lower is better)
Translates to: DKTVAEKTICVSDSWLYPRVAPG*KALTEK
Trigger: CTTCTCAGTTAGTGCCTTCCACCCGGGAGCGACCCT...AGGATAGAGCCAGCTGTCTGACACACAAATGGTCTTTTCAGCCACAGTCTTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR CCA 90 bp GAAAAGACCATTTGTGTGTCAGACAGCTGGCTCTATCCTCCAATCAGTGGAGCACATTCTCGTTCCTCCTaGGAGCGGGAGAAAAGGACC +
Preference number: 4 (lower is better)
Translates to: EKTICVSDSWLYPPISGAHSRSS*EREKRT
Trigger: GGTCCTTTTCTCCCGCTCCCAGGAGGAACGAGAATG...TGCTCCACTGATTGGAGGATAGAGCCAGCTGTCTGACACACAAATGGTCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR CCA 90 bp GAAAAGACCATTTGTGTGTCAGACAGCTGGCTCTATCCTCCAATCAGTGGAGCACCCAAAGAAAGGGCCTaGGTCCCAGGTGCAATCAGT +
Preference number: 4 (lower is better)
Translates to: EKTICVSDSWLYPPISGAPKERA*VPGAIS
Trigger: ACTGATTGCACCTGGGACCCAGGCCCTTTCTTTGGG...TGCTCCACTGATTGGAGGATAGAGCCAGCTGTCTGACACACAAATGGTCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR CCA 90 bp GCTAAAACCAGGTACCTTAGTCAAGCATGGCCTGCGGCAGTGATGCTGACAGTCCACATGGATGAAGGCTaGGACTGGATCCCAAAGAAA +
Preference number: 4 (lower is better)
Translates to: AKTRYLSQAWPAAVMLTVHMDEG*DWIPKK
Trigger: TTTCTTTGGGATCCAGTCCCAGCCTTCATCCATGTG...GACTGTCAGCATCACTGCCGCAGGCCATGCTTGACTAAGGTACCTGGTTTTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR CCA 90 bp ACCATTTGTGTGTCAGACAGCTGGCTCTATCCTCCAATCAGTGGAGCACCCAGGGGAACTTCAGCGGCCTaGATCTTAATCACATGGATG +
Preference number: 4 (lower is better)
Translates to: TICVSDSWLYPPISGAPRGTSAA*ILITWM
Trigger: CATCCATGTGATTAAGATCCAGGCCGCTGAAGTTCC...CCTGGGTGCTCCACTGATTGGAGGATAGAGCCAGCTGTCTGACACACAAATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR TCA 90 bp GCTCTATCCTCCAATCAGTGGAGCACCCAGGACTATCGCAGGAGAGGTGGAACATCCATCACTTTCTGCTaGAACCGAATTTTTGCCACT +
Preference number: 4 (lower is better)
Translates to: ALSSNQWSTQDYRRRGGTSITFC*NRIFAT
Trigger: AGTGGCAAAAATTCGGTTTCAGCAGAAAGTGATGGA...TGTTCCACCTCTCCTGCGATAGTCCTGGGTGCTCCACTGATTGGAGGATAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
CDS-3UTR TCA 90 bp CTAGTGATTAGGAATCTCTATGAGGAATCTGGTTGGGTAGCAAAGCTCAGGTCCCTCTTGAATGGTGGCTaGGCATACATTTCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: LVIRNLYEESGWVAKLRSLLNGG*AYISPG
Trigger: CCCCGGGGAAATGTATGCTCAGCCACCATTCAAGAG...GGACCTGAGCTTTGCTACCCAACCAGATTCCTCATAGAGATTCCTAATCACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR GCA 90 bp GTGTGTCAGACAGCTGGCTCTATCCTCCAATCAGTGGAGCACCCAGGACTATCGTCCACAACAATCATCTaGAGCAACAATTCGACAGGT +
Preference number: 4 (lower is better)
Translates to: VCQTAGSILQSVEHPGLSSTTII*SNNSTG
Trigger: ACCTGTCGAATTGTTGCTGCAGATGATTGTTGTGGA...CGATAGTCCTGGGTGCTCCACTGATTGGAGGATAGAGCCAGCTGTCTGACACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR CCA 90 bp ACCATTTGTGTGTCAGACAGCTGGCTCTATCCTCCAATCAGTGGAGCACCCAGGTGCTGCTCCTATTTGTaGTTAAAACCCTGTCCCACT +
Preference number: 4 (lower is better)
Translates to: TICVSDSWLYPPISGAPRCCSYL*LKPCPT
Trigger: AGTGGGACAGGGTTTTAACCACAAATAGGAGCAGCA...CCTGGGTGCTCCACTGATTGGAGGATAGAGCCAGCTGTCTGACACACAAATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR CCA 90 bp GAAAAGACCATTTGTGTGTCAGACAGCTGGCTCTATCCTCCAATCAGTGGAGCAGGATTTAAGCATCTCTaGGCCAGGTGGGAAGGAGAC +
Preference number: 4 (lower is better)
Translates to: EKTICVSDSWLYPPISGAGFKHL*ARWEGD
Trigger: GTCTCCTTCCCACCTGGCCCAGAGATGCTTAAATCC...TGCTCCACTGATTGGAGGATAGAGCCAGCTGTCTGACACACAAATGGTCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR CCA 90 bp GTAAATCTGAAGAGTCCGTATAATGATTGTTCCCACTTAACCCCTTGGGCCACATGCCCAGGACGTCAGTaGAATCCTGATCTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: VNLKSPYNDCSHLTPWATCPGRQ*NPDLLG
Trigger: CCCCAGGAGATCAGGATTCCACTGACGTCCTGGGCA...TGTGGCCCAAGGGGTTAAGTGGGAACAATCATTATACGGACTCTTCAGATTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR CAA 72 bp TGCAGCAAGTCACTAGGAATTGCATGCTGCTCCTATTaGTGGTTAAAACCCTGTCCCACTCTTGGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: CSKSLGIACCSY*WLKPCPTLGQS
Trigger: GCTCTGGCCAAGAGTGGGACAGGGTTTTAACCACAAATAGGAGCAGCATGCAATTCCTAGTGACTTGCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR TCA 90 bp TGGGCCAGGTGGGAAGGAGACAATGATGACCAAGGATGCTTTCTAGGTGACTTTGGTCAATATAGATCATaGCCCCACCACTTGTTCCAC +
Preference number: 4 (lower is better)
Translates to: WARWEGDNDDQGCFLGDFGQYRS*PHHLFH
Trigger: GTGGAACAAGTGGTGGGGTCATGATCTATATTGACC...AAAGTCACCTAGAAAGCATCCTTGGTCATCATTGTCTCCTTCCCACCTGGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR TCA 90 bp GAGGTCAATGATCCAGATTTTCCACAACAATCATCTGCAGCAACAATTCGACAGGTGGAAGGCACTAACTaGGAAGAAGCCCAGCCGCAG +
Preference number: 4 (lower is better)
Translates to: EVNDPDFPQQSSAATIRQVEGTN*EEAQPQ
Trigger: CTGCGGCTGGGCTTCTTCTCAGTTAGTGCCTTCCAC...CTGTCGAATTGTTGCTGCAGATGATTGTTGTGGAAAATCTGGATCATTGACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR GCA 90 bp TTGCCAAAAGGAACACCCCGAAAGACGGCCAGCCTCAGAGCTGAGAGGGCACAGTTGTGCAATCTTCTCTaGTTCTATAACTGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: LPKGTPRKTASLRAERAQLCNLL*FYNCLF
Trigger: AAAAAGGCAGTTATAGAAGCAGAGAAGATTGCACAA...CTGTGCCCTCTCAGCTCTGAGGCTGGCCGTCTTTCGGGGTGTTCCTTTTGGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR GCA 90 bp GGTAGCAAAGCTCAGGTCCCTGCAGGCCACCACCCTGACTGCAGGAAAACAGAACTAGGAATTGCATGCTaGTCCTATTTGTGGTTAAAA +
Preference number: 4 (lower is better)
Translates to: GSKAQVPAGHHPDCRKTELGIAC*SYLWLK
Trigger: TTTTAACCACAAATAGGAGCAGCATGCAATTCCTAG...TTCTGTTTTCCTGCAGTCAGGGTGGTGGCCTGCAGGGACCTGAGCTTTGCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR CCA 90 bp ACCATTTGTGTGTCAGACAGCTGGCTCTATCCTCCAATCAGTGGAGCACCCAGGGGCCACATCTTGATATaGAGAACATTTCCACCTCTT +
Preference number: 4 (lower is better)
Translates to: TICVSDSWLYPPISGAPRGHILI*RTFPPL
Trigger: AAGAGGTGGAAATGTTCTCCATATCAAGATGTGGCC...CCTGGGTGCTCCACTGATTGGAGGATAGAGCCAGCTGTCTGACACACAAATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
CDS-3UTR CCA 90 bp GGGCTCCAGATAAACAATCTTAAGGAGCATCAGTGTGCTTGTGACCATGGCAGCACAAGGAGGTGGCTGTaGCTAAAACCAGGTACCTTA +
Preference number: 4 (lower is better)
Translates to: GLQINNLKEHQCACDHGSTRRWL*LKPGTL
Trigger: TAAGGTACCTGGTTTTAGCCACAGCCACCTCCTTGT...GCTGCCATGGTCACAAGCACACTGATGCTCCTTAAGATTGTTTATCTGGAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR GCA 90 bp GGCTCTATCCTCCAATCAGTGGAGCACCCAGGACTATCGCAGGAGAGGTGGAACTTGTGCAATCTTCTCTaGTTCTATAACTGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: GSILQSVEHPGLSQERWNLCNLL*FYNCLF
Trigger: AAAAAGGCAGTTATAGAAGCAGAGAAGATTGCACAA...GTTCCACCTCTCCTGCGATAGTCCTGGGTGCTCCACTGATTGGAGGATAGAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
CDS-3UTR GCA 90 bp GAAGATCATTTCCTGGGGAACTTCAGCGGCCTGGATCTTAATCACATGGATGAACTCTCGGGCCAGGAATaGAGCATCTTCGATTTCAGA +
Preference number: 4 (lower is better)
Translates to: EDHFLGNFSGLDLNHMDELSGQE*SIFDFR
Trigger: TCTGAAATCGAAGATGCTGCATTCCTGGCCCGAGAG...TTCATCCATGTGATTAAGATCCAGGCCGCTGAAGTTCCCCAGGAAATGATCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR GCA 90 bp GGGAACTTCAGCGGCCTGGATCTTAATCACATGGATGAAGGCTGGGACTGGATCTGTTTAACATTCCAGTaGAGGCAGTATCTTAGCATC +
Preference number: 4 (lower is better)
Translates to: GNFSGLDLNHMDEGWDWICLTFQ*RQYLSI
Trigger: GATGCTAAGATACTGCCTGCACTGGAATGTTAAACA...GATCCAGTCCCAGCCTTCATCCATGTGATTAAGATCCAGGCCGCTGAAGTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR GCA 90 bp GAGGTCAATGATCCAGATTTTCCACAACAATCATCTGCAGCAACAATTCGACAGGGCCACCACCCTGACTaGAGGAAAACAGAAAGGTGC +
Preference number: 4 (lower is better)
Translates to: EVNDPDFPQQSSAATIRQGHHPD*RKTERC
Trigger: GCACCTTTCTGTTTTCCTGCAGTCAGGGTGGTGGCC...CTGTCGAATTGTTGCTGCAGATGATTGTTGTGGAAAATCTGGATCATTGACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR CCA 90 bp GGCTCTATCCTCCAATCAGTGGAGCACCCAGGACTATCGCAGGAGAGGTGGAACTGGTTCAGCTCATGGTaGATTTTATTGAAGATTAAG +
Preference number: 4 (lower is better)
Translates to: GSILQSVEHPGLSQERWNWFSSW*ILLKIK
Trigger: CTTAATCTTCAATAAAATCCACCATGAGCTGAACCA...GTTCCACCTCTCCTGCGATAGTCCTGGGTGCTCCACTGATTGGAGGATAGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
CDS-3UTR CCA 90 bp TTGATAAGACTGTGGCTGAAAAGACCATTTGTGTGTCAGACAGCTGGCTCTATCCTATCCTCCAATCAGTaGAGCACCCAGGACTATCGC +
Preference number: 4 (lower is better)
Translates to: LIRLWLKRPFVCQTAGSILSSNQ*STQDYR
Trigger: GCGATAGTCCTGGGTGCTCCACTGATTGGAGGATAG...GATAGAGCCAGCTGTCTGACACACAAATGGTCTTTTCAGCCACAGTCTTATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
CDS-3UTR CCA 90 bp TGCAGCAAGTCACTAGGAATTGCATGCTGCTCCTATTTGTGGTTAAAACCCTGTACCCTGTCCCACTCTTaGCCAGAGCTGAAAGGTAAC +
Preference number: 4 (lower is better)
Translates to: CSKSLGIACCSYLWLKPCTLSHS*PELKGN
Trigger: GTTACCTTTCAGCTCTGGCCAAGAGTGGGACAGGGT...ACAGGGTTTTAACCACAAATAGGAGCAGCATGCAATTCCTAGTGACTTGCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR CCA 90 bp ACAGGGAGGCACACTCCTCACACATGGGAGTTTAAGCAGAAGTGCTTTAAGACTGGGGGAGGTGACAGCTaGAGAAACAACTTGGATTTA +
Preference number: 4 (lower is better)
Translates to: TGRHTPHTWEFKQKCFKTGGGDS*RNNLDL
Trigger: TAAATCCAAGTTGTTTCTCCAGCTGTCACCTCCCCC...AGTCTTAAAGCACTTCTGCTTAAACTCCCATGTGTGAGGAGTGTGCCTCCCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR TCA 90 bp CAGAGCTTTGGCTCAGAGCAAAGGTTTCATCTCACCCCAACTTCAAACCAAGCCTCCATCACTTTCTGCTaGAACCGAATTTTTGCCACT +
Preference number: 4 (lower is better)
Translates to: QSFGSEQRFHLTPTSNQASITFC*NRIFAT
Trigger: AGTGGCAAAAATTCGGTTTCAGCAGAAAGTGATGGA...GGCTTGGTTTGAAGTTGGGGTGAGATGAAACCTTTGCTCTGAGCCAAAGCTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR TCA 90 bp GAAAAGACCATTTGTGTGTCAGACAGCTGGCTCTATCCTCCAATCAGTGGAGCACAACTTGTGCTTGTTTaGGGTGGCATATTTGTGTGC +
Preference number: 4 (lower is better)
Translates to: EKTICVSDSWLYPPISGAQLVLV*GGIFVC
Trigger: GCACACAAATATGCCACCTCAAACAAGCACAAGTTG...TGCTCCACTGATTGGAGGATAGAGCCAGCTGTCTGACACACAAATGGTCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
CDS-3UTR TCA 90 bp CTAGTGATTAGGAATCTCTATGAGGAATCTGGTTGGGTAGCAAAGCTCAGGTCCCCTTGGGCCACATCTTaGTATGGAGAACATTTCCAC +
Preference number: 4 (lower is better)
Translates to: LVIRNLYEESGWVAKLRSPWATS*YGEHFH
Trigger: GTGGAAATGTTCTCCATATCAAGATGTGGCCCAAGG...GGACCTGAGCTTTGCTACCCAACCAGATTCCTCATAGAGATTCCTAATCACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR GCA 90 bp GGGAACTTCAGCGGCCTGGATCTTAATCACATGGATGAAGGCTGGGACTGGATCCACGATATCAAACACTaGATAAGGAGCCAACATATT +
Preference number: 4 (lower is better)
Translates to: GNFSGLDLNHMDEGWDWIHDIKH*IRSQHI
Trigger: AATATGTTGGCTCCTTATGCAGTGTTTGATATCGTG...GATCCAGTCCCAGCCTTCATCCATGTGATTAAGATCCAGGCCGCTGAAGTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR GCA 90 bp ACCATTTGTGTGTCAGACAGCTGGCTCTATCCTCCAATCAGTGGAGCACCCAGGTCTTTCTGCAGAGCTTaGTTCAGGTTTTCATCTATT +
Preference number: 4 (lower is better)
Translates to: TICVSDSWLYPPISGAPRSFCRA*FRFSSI
Trigger: AATAGATGAAAACCTGAAGCAAGCTCTGCAGAAAGA...CCTGGGTGCTCCACTGATTGGAGGATAGAGCCAGCTGTCTGACACACAAATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
CDS-3UTR GCA 90 bp GCTCTATCCTCCAATCAGTGGAGCACCCAGGACTATCGCAGGAGAGGTGGAACAAACCTTTTGTTTCTGTaGAGCTATAAGGAGTTTTGT +
Preference number: 4 (lower is better)
Translates to: ALSSNQWSTQDYRRRGGTNLLFL*SYKEFC
Trigger: ACAAAACTCCTTATAGCTGCACAGAAACAAAAGGTT...TGTTCCACCTCTCCTGCGATAGTCCTGGGTGCTCCACTGATTGGAGGATAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
CDS-3UTR GCA 90 bp GTGTGTCAGACAGCTGGCTCTATCCTCCAATCAGTGGAGCACCCAGGACTATCGTATGATACAATACTGTaGAGCAAGTCACTAGGAATT +
Preference number: 4 (lower is better)
Translates to: VCQTAGSILQSVEHPGLSYDTIL*SKSLGI
Trigger: AATTCCTAGTGACTTGCTGCACAGTATTGTATCATA...CGATAGTCCTGGGTGCTCCACTGATTGGAGGATAGAGCCAGCTGTCTGACACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR GCA 90 bp GAAAAGACCATTTGTGTGTCAGACAGCTGGCTCTATCCTCCAATCAGTGGAGCAATTAAATTCACTGGCTaGCCAGGACGTCAGTGGAAT +
Preference number: 4 (lower is better)
Translates to: EKTICVSDSWLYPPISGAIKFTG*PGRQWN
Trigger: ATTCCACTGACGTCCTGGGCAGCCAGTGAATTTAAT...TGCTCCACTGATTGGAGGATAGAGCCAGCTGTCTGACACACAAATGGTCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR GCA 90 bp AGACCATTTGTGTGTCAGACAGCTGGCTCTATCCTCCAATCAGTGGAGCACCCATCTCCATATTACAAATaGCTCTATAGGATAAGGCCC +
Preference number: 4 (lower is better)
Translates to: RPFVCQTAGSILQSVEHPSPYYK*LYRIRP
Trigger: GGGCCTTATCCTATAGAGGCATTTGTAATATGGAGA...TGGGTGCTCCACTGATTGGAGGATAGAGCCAGCTGTCTGACACACAAATGGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR GCA 90 bp GGAATTGCATGCTGCTCCTATTTGTGGTTAAAACCCTGTCCCACTCTTGGCCAGGAGTTTAAGCAGAAGTaGTTTAAGACTTCACAGCGG +
Preference number: 4 (lower is better)
Translates to: GIACCSYLWLKPCPTLGQEFKQK*FKTSQR
Trigger: CCGCTGTGAAGTCTTAAAGCACTTCTGCTTAAACTC...CTGGCCAAGAGTGGGACAGGGTTTTAACCACAAATAGGAGCAGCATGCAATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR CCA 90 bp TTGATAAGACTGTGGCTGAAAAGACCATTTGTGTGTCAGACAGCTGGCTCTATCAAGGCCCCAGAGCTTTaGCTCAGAGCAAAGGTTTCA +
Preference number: 4 (lower is better)
Translates to: LIRLWLKRPFVCQTAGSIKAPEL*LRAKVS
Trigger: TGAAACCTTTGCTCTGAGCCAAAGCTCTGGGGCCTT...GATAGAGCCAGCTGTCTGACACACAAATGGTCTTTTCAGCCACAGTCTTATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR TCA 90 bp TTGATAAGACTGTGGCTGAAAAGACCATTTGTGTGTCAGACAGCTGGCTCTATCGGTCAATATAGATCATaGCCCCACCACTTGTTCCAC +
Preference number: 4 (lower is better)
Translates to: LIRLWLKRPFVCQTAGSIGQYRS*PHHLFH
Trigger: GTGGAACAAGTGGTGGGGTCATGATCTATATTGACC...GATAGAGCCAGCTGTCTGACACACAAATGGTCTTTTCAGCCACAGTCTTATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
CDS-3UTR TCA 90 bp CAGAGCTTTGGCTCAGAGCAAAGGTTTCATCTCACCCCAACTTCAAACCAAGCCATATTTCAAAGCACATaGGGAGTCCACGAACATGTT +
Preference number: 4 (lower is better)
Translates to: QSFGSEQRFHLTPTSNQAIFQST*GVHEHV
Trigger: AACATGTTCGTGGACTCCTCATGTGCTTTGAAATAT...GGCTTGGTTTGAAGTTGGGGTGAGATGAAACCTTTGCTCTGAGCCAAAGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR GCA 90 bp TGGGCCAGGTGGGAAGGAGACAATGATGACCAAGGATGCTTTCTAGGTGACTTTGGTCTTGTCATAATCTaGAGTATAGTTCCTCACGAT +
Preference number: 4 (lower is better)
Translates to: WARWEGDNDDQGCFLGDFGLVII*SIVPHD
Trigger: ATCGTGAGGAACTATACTGCAGATTATGACAAGACC...AAAGTCACCTAGAAAGCATCCTTGGTCATCATTGTCTCCTTCCCACCTGGCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR GCA 90 bp ACCATTTGTGTGTCAGACAGCTGGCTCTATCCTCCAATCAGTGGAGCACCCAGGAATTTTTGCCACTTGTaGAATCTTCTCTGCTTCTAT +
Preference number: 4 (lower is better)
Translates to: TICVSDSWLYPPISGAPRNFCHL*NLLCFY
Trigger: ATAGAAGCAGAGAAGATTGCACAAGTGGCAAAAATT...CCTGGGTGCTCCACTGATTGGAGGATAGAGCCAGCTGTCTGACACACAAATGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
CDS-3UTR GCA 90 bp ACAGGGAGGCACACTCCTCACACATGGGAGTTTAAGCAGAAGTGCTTTAAGACTAACATTTCCACCTCTTaGATCAACCTGTGCTCTCTT +
Preference number: 4 (lower is better)
Translates to: TGRHTPHTWEFKQKCFKTNISTS*INLCSL
Trigger: AAGAGAGCACAGGTTGATGCAAGAGGTGGAAATGTT...AGTCTTAAAGCACTTCTGCTTAAACTCCCATGTGTGAGGAGTGTGCCTCCCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR GCA 90 bp AGACCATTTGTGTGTCAGACAGCTGGCTCTATCCTCCAATCAGTGGAGCACCCAAATGATGACCAAGGATaGTTTCTAGGTGACTTTTTG +
Preference number: 4 (lower is better)
Translates to: RPFVCQTAGSILQSVEHPNDDQG*FLGDFL
Trigger: CAAAAAGTCACCTAGAAAGCATCCTTGGTCATCATT...TGGGTGCTCCACTGATTGGAGGATAGAGCCAGCTGTCTGACACACAAATGGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR CCA 90 bp GAAGATCATTTCCTGGGGAACTTCAGCGGCCTGGATCTTAATCACATGGATGAATCATCTCTTGAATGGTaGCTGAGCATACATTTCCCC +
Preference number: 4 (lower is better)
Translates to: EDHFLGNFSGLDLNHMDESSLEW*LSIHFP
Trigger: GGGGAAATGTATGCTCAGCCACCATTCAAGAGATGA...TTCATCCATGTGATTAAGATCCAGGCCGCTGAAGTTCCCCAGGAAATGATCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR CCA 90 bp ACAGGGAGGCACACTCCTCACACATGGGAGTTTAAGCAGAAGTGCTTTAAGACTCAGTCATCTCTTGAATaGTGGCTGAGCATACATTTC +
Preference number: 4 (lower is better)
Translates to: TGRHTPHTWEFKQKCFKTQSSLE*WLSIHF
Trigger: GAAATGTATGCTCAGCCACCATTCAAGAGATGACTG...AGTCTTAAAGCACTTCTGCTTAAACTCCCATGTGTGAGGAGTGTGCCTCCCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR CCA 90 bp GAAGATCATTTCCTGGGGAACTTCAGCGGCCTGGATCTTAATCACATGGATGAATGGATCTTAATCACATaGATGAAGGCTGGGACTGGA +
Preference number: 4 (lower is better)
Translates to: EDHFLGNFSGLDLNHMDEWILIT*MKAGTG
Trigger: TCCAGTCCCAGCCTTCATCCATGTGATTAAGATCCA...TTCATCCATGTGATTAAGATCCAGGCCGCTGAAGTTCCCCAGGAAATGATCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR CCA 90 bp TGCAAATCGTATCAAGTAAAAGGTTGCTCAAGTGGAAGATCATTTCCTGGGGAATACCTTAGTCAAGCATaGCCTGCGGCAGTGATGCTG +
Preference number: 4 (lower is better)
Translates to: CKSYQVKGCSSGRSFPGEYLSQA*PAAVML
Trigger: CAGCATCACTGCCGCAGGCCATGCTTGACTAAGGTA...TTCCCCAGGAAATGATCTTCCACTTGAGCAACCTTTTACTTGATACGATTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR TCA 90 bp TGCAGCAAGTCACTAGGAATTGCATGCTGCTCCTATTTGTGGTTAAAACCCTGTCAACTTGTGCTTGTTTaGGGTGGCATATTTGTGTGC +
Preference number: 4 (lower is better)
Translates to: CSKSLGIACCSYLWLKPCQLVLV*GGIFVC
Trigger: GCACACAAATATGCCACCTCAAACAAGCACAAGTTG...ACAGGGTTTTAACCACAAATAGGAGCAGCATGCAATTCCTAGTGACTTGCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR TCA 90 bp GTAAATCTGAAGAGTCCGTATAATGATTGTTCCCACTTAACCCCTTGGGCCACATCTCTTTGTTTTGGATaGCGTTCTCTCCAGAGGGTT +
Preference number: 4 (lower is better)
Translates to: VNLKSPYNDCSHLTPWATSLCFG*RSLQRV
Trigger: AACCCTCTGGAGAGAACGTCATCCAAAACAAAGAGA...TGTGGCCCAAGGGGTTAAGTGGGAACAATCATTATACGGACTCTTCAGATTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
CDS-3UTR TCA 90 bp TTGATAAGACTGTGGCTGAAAAGACCATTTGTGTGTCAGACAGCTGGCTCTATCTCTCTTTGTTTTGGATaGCGTTCTCTCCAGAGGGTT +
Preference number: 4 (lower is better)
Translates to: LIRLWLKRPFVCQTAGSISLCFG*RSLQRV
Trigger: AACCCTCTGGAGAGAACGTCATCCAAAACAAAGAGA...GATAGAGCCAGCTGTCTGACACACAAATGGTCTTTTCAGCCACAGTCTTATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
CDS-3UTR GCA 90 bp GAAAAGACCATTTGTGTGTCAGACAGCTGGCTCTATCCTCCAATCAGTGGAGCAGGTCTTGTCATAATCTaGAGTATAGTTCCTCACGAT +
Preference number: 4 (lower is better)
Translates to: EKTICVSDSWLYPPISGAGLVII*SIVPHD
Trigger: ATCGTGAGGAACTATACTGCAGATTATGACAAGACC...TGCTCCACTGATTGGAGGATAGAGCCAGCTGTCTGACACACAAATGGTCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
CDS-3UTR GCA 90 bp GAAAAGACCATTTGTGTGTCAGACAGCTGGCTCTATCCTCCAATCAGTGGAGCATCACTAGGAATTGCATaGTGCTCCTATTTGTGGTTA +
Preference number: 4 (lower is better)
Translates to: EKTICVSDSWLYPPISGASLGIA*CSYLWL
Trigger: TAACCACAAATAGGAGCAGCATGCAATTCCTAGTGA...TGCTCCACTGATTGGAGGATAGAGCCAGCTGTCTGACACACAAATGGTCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR TCA 90 bp GAGGTCAATGATCCAGATTTTCCACAACAATCATCTGCAGCAACAATTCGACAGTTCTCAGTCATCTCTTaGATGGTGGCTGAGCATACA +
Preference number: 4 (lower is better)
Translates to: EVNDPDFPQQSSAATIRQFSVIS*MVAEHT
Trigger: TGTATGCTCAGCCACCATTCAAGAGATGACTGAGAA...CTGTCGAATTGTTGCTGCAGATGATTGTTGTGGAAAATCTGGATCATTGACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR TCA 90 bp TGCAGCAAGTCACTAGGAATTGCATGCTGCTCCTATTTGTGGTTAAAACCCTGTAAGCACAGAGGTCAATaGTCCAGATTTTCCACAACA +
Preference number: 4 (lower is better)
Translates to: CSKSLGIACCSYLWLKPCKHRGQ*SRFSTT
Trigger: TGTTGTGGAAAATCTGGATCATTGACCTCTGTGCTT...ACAGGGTTTTAACCACAAATAGGAGCAGCATGCAATTCCTAGTGACTTGCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR GCA 90 bp AAGCATCTCTGGGCCAGGTGGGAAGGAGACAATGATGACCAAGGATGCTTTCTAAATTTTTGCCACTTGTaGAATCTTCTCTGCTTCTAT +
Preference number: 4 (lower is better)
Translates to: KHLWARWEGDNDDQGCFLNFCHL*NLLCFY
Trigger: ATAGAAGCAGAGAAGATTGCACAAGTGGCAAAAATT...TAGAAAGCATCCTTGGTCATCATTGTCTCCTTCCCACCTGGCCCAGAGATGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR GCA 90 bp GATAAGACTGTGGCTGAAAAGACCATTTGTGTGTCAGACAGCTGGCTCTATCCTTGTTTAACATTCCAGTaGAGGCAGTATCTTAGCATC +
Preference number: 4 (lower is better)
Translates to: DKTVAEKTICVSDSWLYPCLTFQ*RQYLSI
Trigger: GATGCTAAGATACTGCCTGCACTGGAATGTTAAACA...AGGATAGAGCCAGCTGTCTGACACACAAATGGTCTTTTCAGCCACAGTCTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
CDS-3UTR CCA 90 bp TTGATAAGACTGTGGCTGAAAAGACCATTTGTGTGTCAGACAGCTGGCTCTATCTGTGCTTGTTTGAGGTaGCATATTTGTGTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: LIRLWLKRPFVCQTAGSICACLR*HICVQH
Trigger: ATGCTGCACACAAATATGCCACCTCAAACAAGCACA...GATAGAGCCAGCTGTCTGACACACAAATGGTCTTTTCAGCCACAGTCTTATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
CDS-3UTR TCA 90 bp TTGATAAGACTGTGGCTGAAAAGACCATTTGTGTGTCAGACAGCTGGCTCTATCATATTTCAAAGCACATaGGGAGTCCACGAACATGTT +
Preference number: 4 (lower is better)
Translates to: LIRLWLKRPFVCQTAGSIIFQST*GVHEHV
Trigger: AACATGTTCGTGGACTCCTCATGTGCTTTGAAATAT...GATAGAGCCAGCTGTCTGACACACAAATGGTCTTTTCAGCCACAGTCTTATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
CDS-3UTR GCA 90 bp GATAAGACTGTGGCTGAAAAGACCATTTGTGTGTCAGACAGCTGGCTCTATCCTCACGATATCAAACACTaGATAAGGAGCCAACATATT +
Preference number: 4 (lower is better)
Translates to: DKTVAEKTICVSDSWLYPHDIKH*IRSQHI
Trigger: AATATGTTGGCTCCTTATGCAGTGTTTGATATCGTG...AGGATAGAGCCAGCTGTCTGACACACAAATGGTCTTTTCAGCCACAGTCTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
CDS-3UTR GCA 90 bp GTAAATCTGAAGAGTCCGTATAATGATTGTTCCCACTTAACCCCTTGGGCCACAAGGTTTAAGTCTTTCTaGAGAGCTTGCTTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: VNLKSPYNDCSHLTPWATRFKSF*RACFRF
Trigger: AAACCTGAAGCAAGCTCTGCAGAAAGACTTAAACCT...TGTGGCCCAAGGGGTTAAGTGGGAACAATCATTATACGGACTCTTCAGATTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
CDS-3UTR GCA 90 bp GTAAATCTGAAGAGTCCGTATAATGATTGTTCCCACTTAACCCCTTGGGCCACACTGAAACCGAATTTTTaGCACTTGTGCAATCTTCTC +
Preference number: 4 (lower is better)
Translates to: VNLKSPYNDCSHLTPWATLKPNF*HLCNLL
Trigger: GAGAAGATTGCACAAGTGGCAAAAATTCGGTTTCAG...TGTGGCCCAAGGGGTTAAGTGGGAACAATCATTATACGGACTCTTCAGATTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
CDS-3UTR CCA 90 bp ACAGGGAGGCACACTCCTCACACATGGGAGTTTAAGCAGAAGTGCTTTAAGACTTGGTTCAGCTCATGGTaGATTTTATTGAAGATTAAG +
Preference number: 4 (lower is better)
Translates to: TGRHTPHTWEFKQKCFKTWFSSW*ILLKIK
Trigger: CTTAATCTTCAATAAAATCCACCATGAGCTGAACCA...AGTCTTAAAGCACTTCTGCTTAAACTCCCATGTGTGAGGAGTGTGCCTCCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR CCA 90 bp GAGGTCAATGATCCAGATTTTCCACAACAATCATCTGCAGCAACAATTCGACAGGGCCACATCTTGATATaGAGAACATTTCCACCTCTT +
Preference number: 4 (lower is better)
Translates to: EVNDPDFPQQSSAATIRQGHILI*RTFPPL
Trigger: AAGAGGTGGAAATGTTCTCCATATCAAGATGTGGCC...CTGTCGAATTGTTGCTGCAGATGATTGTTGTGGAAAATCTGGATCATTGACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR CAA 72 bp GACAATGATGACCAAGGATGCTTTCTAGGTGACTTTTaGTTCCACACTATGTGGGCTCCAGATAAACAATCT +
Preference number: 4 (lower is better)
Translates to: DNDDQGCFLGDF*FHTMWAPDKQS
Trigger: AGATTGTTTATCTGGAGCCCACATAGTGTGGAACAAAAAGTCACCTAGAAAGCATCCTTGGTCATCATTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
3UTR CAA 72 bp ATTCAAATCTGGGCTTTCCTTTCCCAAATAAAGTGTTaGGCACAACCAACAAACTGTCATGAGACTGACAGG +
Preference number: 4 (lower is better)
Translates to: IQIWAFLSQIKC*AQPTNCHETDR
Trigger: CCTGTCAGTCTCATGACAGTTTGTTGGTTGTGCCAAACACTTTATTTGGGAAAGGAAAGCCCAGATTTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR GCA 90 bp CCATATTACAAATGCCTCTATAGGATAAGGCCCAGGGGAAAGACCCATTCAAATCTGAAACCGAATTTTTaGCACTTGTGCAATCTTCTC +
Preference number: 4 (lower is better)
Translates to: PYYKCLYRIRPRGKTHSNLKPNF*HLCNLL
Trigger: GAGAAGATTGCACAAGTGGCAAAAATTCGGTTTCAG...ATTTGAATGGGTCTTTCCCCTGGGCCTTATCCTATAGAGGCATTTGTAATATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR GCA 90 bp CTTAGCATCAGACTTTCCTCATTCATGAGTAGCAGTTTAGAAAGGAATACATATCTCTCGGGCCAGGAATaGAGCATCTTCGATTTCAGA +
Preference number: 4 (lower is better)
Translates to: LSIRLSSFMSSSLERNTYLSGQE*SIFDFR
Trigger: TCTGAAATCGAAGATGCTGCATTCCTGGCCCGAGAG...ATATGTATTCCTTTCTAAACTGCTACTCATGAATGAGGAAAGTCTGATGCTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
CDS-3UTR GCA 90 bp TGCAAATCGTATCAAGTAAAAGGTTGCTCAAGTGGAAGATCATTTCCTGGGGAAAACTACGCAGCACACTaGTCCAGAAAAGTTAAACTG +
Preference number: 4 (lower is better)
Translates to: CKSYQVKGCSSGRSFPGENYAAH*SRKVKL
Trigger: CAGTTTAACTTTTCTGGAGCAGTGTGCTGCGTAGTT...TTCCCCAGGAAATGATCTTCCACTTGAGCAACCTTTTACTTGATACGATTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR CCA 90 bp GAGGTCAATGATCCAGATTTTCCACAACAATCATCTGCAGCAACAATTCGACAGTTGTTCCACACTATGTaGGCTCCAGATAAACAATCT +
Preference number: 4 (lower is better)
Translates to: EVNDPDFPQQSSAATIRQLFHTM*APDKQS
Trigger: AGATTGTTTATCTGGAGCCCACATAGTGTGGAACAA...CTGTCGAATTGTTGCTGCAGATGATTGTTGTGGAAAATCTGGATCATTGACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR GCA 90 bp TGCAAATCGTATCAAGTAAAAGGTTGCTCAAGTGGAAGATCATTTCCTGGGGAAAGGTTTAAGTCTTTCTaGAGAGCTTGCTTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: CKSYQVKGCSSGRSFPGERFKSF*RACFRF
Trigger: AAACCTGAAGCAAGCTCTGCAGAAAGACTTAAACCT...TTCCCCAGGAAATGATCTTCCACTTGAGCAACCTTTTACTTGATACGATTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR GCA 90 bp TTGATAAGACTGTGGCTGAAAAGACCATTTGTGTGTCAGACAGCTGGCTCTATCAACCTTTTGTTTCTGTaGAGCTATAAGGAGTTTTGT +
Preference number: 4 (lower is better)
Translates to: LIRLWLKRPFVCQTAGSINLLFL*SYKEFC
Trigger: ACAAAACTCCTTATAGCTGCACAGAAACAAAAGGTT...GATAGAGCCAGCTGTCTGACACACAAATGGTCTTTTCAGCCACAGTCTTATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
CDS TCA 90 bp GGCTCGCGAGGAAAGCCGACCCCTCGGCCGCGCCTCACCGATCAGTaGCGCATCGCCCCCGCCCGCACGTGCAGCCGACTCCCGCGCCGA +
Preference number: 5 (lower is better)
Translates to: GSRGKPTPRPRLTDQ*RIAPARTCSRLPRR
Trigger: TCGGCGCGGGAGTCGGCTGCACGTGCGGGCGGGGGCGATGCGTCACTGATCGGTGAGGCGCGGCCGAGGGGTCGGCTTTCCTCGCGAGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370408.2
ENST00000421367.7
CDS TCA 90 bp GAAACTCCCTCTCCCAAGGGTCGCTCCCGGGTGGAAGGCACTAACTaGGAAGAAGCCCAGCCGCAGGCTCGCGAGGAAAGCCGACCCCTC +
Preference number: 5 (lower is better)
Translates to: ETPSPKGRSRVEGTN*EEAQPQAREESRPL
Trigger: GAGGGGTCGGCTTTCCTCGCGAGCCTGCGGCTGGGCTTCTTCTCAGTTAGTGCCTTCCACCCGGGAGCGACCCTTGGGAGAGGGAGTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS CCA 90 bp TCGGTGAGCTTCCTGAAACTCCCTCTCCCAAGGGTCGCTCCCGGGTaGAAGGCACTAACTGAGAAGAAGCCCAGCCGCAGGCTCGCGAGG +
Preference number: 5 (lower is better)
Translates to: SVSFLKLPLPRVAPG*KALTEKKPSRRLAR
Trigger: CCTCGCGAGCCTGCGGCTGGGCTTCTTCTCAGTTAGTGCCTTCCACCCGGGAGCGACCCTTGGGAGAGGGAGTTTCAGGAAGCTCACCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS CCA 90 bp CTCCCCTGTAGTACACAGCCAGATGGCCCTCCTCAATCTTGTGGATaGAGGCGTAGAGCAGGACAGCCACCAACCCCACCACTGCAGCCA +
Preference number: 5 (lower is better)
Translates to: LPCSTQPDGPPQSCG*RRRAGQPPTPPLQP
Trigger: TGGCTGCAGTGGTGGGGTTGGTGGCTGTCCTGCTCTACGCCTCCATCCACAAGATTGAGGAGGGCCATCTGGCTGTGTACTACAGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370408.2
ENST00000407654.7
ENST00000421367.7
CDS-3UTR CAA 90 bp GGGCTCCAGATAAACAATCTTAAGGAGCATCAGTGTGCTTGTGACCATGGCAGCGAGCCCGCTGACCCCTaGCCAACTCCTCCGCCCCCG +
Preference number: 5 (lower is better)
Translates to: GLQINNLKEHQCACDHGSEPADP*PTPPPP
Trigger: CGGGGGCGGAGGAGTTGGCAAGGGGTCAGCGGGCTC...GCTGCCATGGTCACAAGCACACTGATGCTCCTTAAGATTGTTTATCTGGAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS GCA 90 bp CTTGTGGATGGAGGCGTAGAGCAGGACAGCCACCAACCCCACCACTaGAGCCACCAGAACCCGGGCTTGAGTCATATTCATTCTCGTTCC +
Preference number: 5 (lower is better)
Translates to: LVDGGVEQDSHQPHH*SHQNPGLSHIHSRS
Trigger: GGAACGAGAATGAATATGACTCAAGCCCGGGTTCTGGTGGCTGCAGTGGTGGGGTTGGTGGCTGTCCTGCTCTACGCCTCCATCCACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370408.2
ENST00000407654.7
ENST00000421367.7
CDS CCA 90 bp AGCCACCAGAACCCGGGCTTGAGTCATATTCATTCTCGTTCCTCCTaGGAGCGGGAGAAAAGGACCCTCAGTCCCGTGAGTGACAGGTCC +
Preference number: 5 (lower is better)
Translates to: SHQNPGLSHIHSRSS*EREKRTLSPVSDRS
Trigger: GGACCTGTCACTCACGGGACTGAGGGTCCTTTTCTCCCGCTCCCAGGAGGAACGAGAATGAATATGACTCAAGCCCGGGTTCTGGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR CAA 90 bp GGCTCTATCCTCCAATCAGTGGAGCACCCAGGACTATCGCAGGAGAGGTGGAACCCCTTGGGCCACATCTaGATATGGAGAACATTTCCA +
Preference number: 5 (lower is better)
Translates to: GSILQSVEHPGLSQERWNPLGHI*IWRTFP
Trigger: TGGAAATGTTCTCCATATCAAGATGTGGCCCAAGGG...GTTCCACCTCTCCTGCGATAGTCCTGGGTGCTCCACTGATTGGAGGATAGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
CDS-3UTR CAA 90 bp ACCATTTGTGTGTCAGACAGCTGGCTCTATCCTCCAATCAGTGGAGCACCCAGGCACCAGAACCCGGGCTaGAGTCATATTCATTCTCGT +
Preference number: 5 (lower is better)
Translates to: TICVSDSWLYPPISGAPRHQNPG*SHIHSR
Trigger: ACGAGAATGAATATGACTCAAGCCCGGGTTCTGGTG...CCTGGGTGCTCCACTGATTGGAGGATAGAGCCAGCTGTCTGACACACAAATGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
CDS-3UTR CAA 90 bp GGGAACTTCAGCGGCCTGGATCTTAATCACATGGATGAAGGCTGGGACTGGATCCACCAGAACCCGGGCTaGAGTCATATTCATTCTCGT +
Preference number: 5 (lower is better)
Translates to: GNFSGLDLNHMDEGWDWIHQNPG*SHIHSR
Trigger: ACGAGAATGAATATGACTCAAGCCCGGGTTCTGGTG...GATCCAGTCCCAGCCTTCATCCATGTGATTAAGATCCAGGCCGCTGAAGTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR CAA 90 bp GGCTCTATCCTCCAATCAGTGGAGCACCCAGGACTATCGCAGGAGAGGTGGAACTGTGCTCTCTTTGTTTaGGATGACGTTCTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: GSILQSVEHPGLSQERWNCALFV*DDVLSR
Trigger: TCTGGAGAGAACGTCATCCAAAACAAAGAGAGCACA...GTTCCACCTCTCCTGCGATAGTCCTGGGTGCTCCACTGATTGGAGGATAGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
CDS-3UTR CAA 90 bp AAGCATCTCTGGGCCAGGTGGGAAGGAGACAATGATGACCAAGGATGCTTTCTATCCAGGGCCATCACTTaGGGGCAACAGCTTTTGCTC +
Preference number: 5 (lower is better)
Translates to: KHLWARWEGDNDDQGCFLSRAIT*GQQLLL
Trigger: GAGCAAAAGCTGTTGCCCCAAAGTGATGGCCCTGGA...TAGAAAGCATCCTTGGTCATCATTGTCTCCTTCCCACCTGGCCCAGAGATGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR CAA 90 bp GGCTCTATCCTCCAATCAGTGGAGCACCCAGGACTATCGCAGGAGAGGTGGAACGCTGAAACCGAATTTTaGCCACTTGTGCAATCTTCT +
Preference number: 5 (lower is better)
Translates to: GSILQSVEHPGLSQERWNAETEF*PLVQSS
Trigger: AGAAGATTGCACAAGTGGCAAAAATTCGGTTTCAGC...GTTCCACCTCTCCTGCGATAGTCCTGGGTGCTCCACTGATTGGAGGATAGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
CDS-3UTR CAA 90 bp GCTCTATCCTCCAATCAGTGGAGCACCCAGGACTATCGCAGGAGAGGTGGAACATGTGCTCTCTTTGTTTaGGATGACGTTCTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: ALSSNQWSTQDYRRRGGTCALFV*DDVLSR
Trigger: TCTGGAGAGAACGTCATCCAAAACAAAGAGAGCACA...TGTTCCACCTCTCCTGCGATAGTCCTGGGTGCTCCACTGATTGGAGGATAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
CDS-3UTR CAA 90 bp GCTCTATCCTCCAATCAGTGGAGCACCCAGGACTATCGCAGGAGAGGTGGAACACAACCTGTGCTCTCTTaGTTTTGGATGACGTTCTCT +
Preference number: 5 (lower is better)
Translates to: ALSSNQWSTQDYRRRGGTQPVLS*FWMTFS
Trigger: AGAGAACGTCATCCAAAACAAAGAGAGCACAGGTTG...TGTTCCACCTCTCCTGCGATAGTCCTGGGTGCTCCACTGATTGGAGGATAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
CDS-3UTR CAA 90 bp AGACCATTTGTGTGTCAGACAGCTGGCTCTATCCTCCAATCAGTGGAGCACCCATTCCCACTTAACCCCTaGGGCCACATCTTGATATGG +
Preference number: 5 (lower is better)
Translates to: RPFVCQTAGSILQSVEHPFPLNP*GHILIW
Trigger: CCATATCAAGATGTGGCCCAAGGGGTTAAGTGGGAA...TGGGTGCTCCACTGATTGGAGGATAGAGCCAGCTGTCTGACACACAAATGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
CDS CCA 90 bp GGAGAACATTTCCACCTCTTGCATCAACCTGTGCTCTCTTTGTTTTaGATGACGTTCTCTCCAGAGGGTTCAAGAGCCTCCTTAGAGGGG +
Preference number: 5 (lower is better)
Translates to: GEHFHLLHQPVLSLF*MTFSPEGSRASLEG
Trigger: CCCCTCTAAGGAGGCTCTTGAACCCTCTGGAGAGAACGTCATCCAAAACAAAGAGAGCACAGGTTGATGCAAGAGGTGGAAATGTTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
CDS-3UTR CAA 90 bp ACCATTTGTGTGTCAGACAGCTGGCTCTATCCTCCAATCAGTGGAGCACCCAGGATGGCTTCTGGGATTTaGGGTTTTGTAACACGCACA +
Preference number: 5 (lower is better)
Translates to: TICVSDSWLYPPISGAPRMASGI*GFVTRT
Trigger: TGTGCGTGTTACAAAACCCAAAATCCCAGAAGCCAT...CCTGGGTGCTCCACTGATTGGAGGATAGAGCCAGCTGTCTGACACACAAATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
CDS-3UTR CAA 90 bp TGGGCCAGGTGGGAAGGAGACAATGATGACCAAGGATGCTTTCTAGGTGACTTTTTCCCACTTAACCCCTaGGGCCACATCTTGATATGG +
Preference number: 5 (lower is better)
Translates to: WARWEGDNDDQGCFLGDFFPLNP*GHILIW
Trigger: CCATATCAAGATGTGGCCCAAGGGGTTAAGTGGGAA...AAAGTCACCTAGAAAGCATCCTTGGTCATCATTGTCTCCTTCCCACCTGGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR CAA 90 bp CAGAGCTTTGGCTCAGAGCAAAGGTTTCATCTCACCCCAACTTCAAACCAAGCCGCATGCTGCTCCTATTaGTGGTTAAAACCCTGTCCC +
Preference number: 5 (lower is better)
Translates to: QSFGSEQRFHLTPTSNQAACCSY*WLKPCP
Trigger: GGGACAGGGTTTTAACCACAAATAGGAGCAGCATGC...GGCTTGGTTTGAAGTTGGGGTGAGATGAAACCTTTGCTCTGAGCCAAAGCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR CAA 90 bp TGGGCCAGGTGGGAAGGAGACAATGATGACCAAGGATGCTTTCTAGGTGACTTTGGGGTCAACTTGTGCTaGTTTGAGGTGGCATATTTG +
Preference number: 5 (lower is better)
Translates to: WARWEGDNDDQGCFLGDFGVNLC*FEVAYL
Trigger: CAAATATGCCACCTCAAACAAGCACAAGTTGACCCC...AAAGTCACCTAGAAAGCATCCTTGGTCATCATTGTCTCCTTCCCACCTGGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR CAA 90 bp GTGTGTCAGACAGCTGGCTCTATCCTCCAATCAGTGGAGCACCCAGGACTATCGTCCCAAATAAAGTGTTaGGCACAACCAACAAACTGT +
Preference number: 5 (lower is better)
Translates to: VCQTAGSILQSVEHPGLSSQIKC*AQPTNC
Trigger: ACAGTTTGTTGGTTGTGCCAAACACTTTATTTGGGA...CGATAGTCCTGGGTGCTCCACTGATTGGAGGATAGAGCCAGCTGTCTGACACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR CAA 90 bp AGACCATTTGTGTGTCAGACAGCTGGCTCTATCCTCCAATCAGTGGAGCACCCAGTCTTTCTGCAGAGCTaGCTTCAGGTTTTCATCTAT +
Preference number: 5 (lower is better)
Translates to: RPFVCQTAGSILQSVEHPVFLQS*LQVFIY
Trigger: ATAGATGAAAACCTGAAGCAAGCTCTGCAGAAAGAC...TGGGTGCTCCACTGATTGGAGGATAGAGCCAGCTGTCTGACACACAAATGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
CDS-3UTR CAA 90 bp AAGCATCTCTGGGCCAGGTGGGAAGGAGACAATGATGACCAAGGATGCTTTCTAAGCTGGAGAAACAACTaGGATTTAAGCATCTCTGGG +
Preference number: 5 (lower is better)
Translates to: KHLWARWEGDNDDQGCFLSWRNN*DLSISG
Trigger: CCCAGAGATGCTTAAATCCAAGTTGTTTCTCCAGCT...TAGAAAGCATCCTTGGTCATCATTGTCTCCTTCCCACCTGGCCCAGAGATGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR CAA 90 bp GCGTACACAAGAGTTGTCTTAACAAGCTGCACAAACTCAGGCCGAACTACGCAGGTCTTTCTGCAGAGCTaGCTTCAGGTTTTCATCTAT +
Preference number: 5 (lower is better)
Translates to: AYTRVVLTSCTNSGRTTQVFLQS*LQVFIY
Trigger: ATAGATGAAAACCTGAAGCAAGCTCTGCAGAAAGAC...CTGCGTAGTTCGGCCTGAGTTTGTGCAGCTTGTTAAGACAACTCTTGTGTACGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR CAA 90 bp CTTAGCATCAGACTTTCCTCATTCATGAGTAGCAGTTTAGAAAGGAATACATATTCTCCCTCCGGAAACTaGGCGCTCTCTCGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: LSIRLSSFMSSSLERNTYSPSGN*ALSRRL
Trigger: CAGCCTGCGAGAGAGCGCCAAGTTTCCGGAGGGAGA...ATATGTATTCCTTTCTAAACTGCTACTCATGAATGAGGAAAGTCTGATGCTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS TCA 90 bp AGTCCGTATAATGATTGTTCCCACTTAACCCCTTGGGCCACATCTTaGTATGGAGAACATTTCCACCTCTTGCATCAACCTGTGCTCTCT +
Preference number: 5 (lower is better)
Translates to: SPYNDCSHLTPWATS*YGEHFHLLHQPVLS
Trigger: AGAGAGCACAGGTTGATGCAAGAGGTGGAAATGTTCTCCATATCAAGATGTGGCCCAAGGGGTTAAGTGGGAACAATCATTATACGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
CDS-3UTR CAA 90 bp GTAAATCTGAAGAGTCCGTATAATGATTGTTCCCACTTAACCCCTTGGGCCACACCGAATTTTTGCCACTaGTGCAATCTTCTCTGCTTC +
Preference number: 5 (lower is better)
Translates to: VNLKSPYNDCSHLTPWATPNFCH*CNLLCF
Trigger: GAAGCAGAGAAGATTGCACAAGTGGCAAAAATTCGG...TGTGGCCCAAGGGGTTAAGTGGGAACAATCATTATACGGACTCTTCAGATTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
CDS-3UTR CAA 90 bp GTAAATCTGAAGAGTCCGTATAATGATTGTTCCCACTTAACCCCTTGGGCCACACAACCTGTGCTCTCTTaGTTTTGGATGACGTTCTCT +
Preference number: 5 (lower is better)
Translates to: VNLKSPYNDCSHLTPWATQPVLS*FWMTFS
Trigger: AGAGAACGTCATCCAAAACAAAGAGAGCACAGGTTG...TGTGGCCCAAGGGGTTAAGTGGGAACAATCATTATACGGACTCTTCAGATTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
CDS-3UTR CAA 90 bp CCATATTACAAATGCCTCTATAGGATAAGGCCCAGGGGAAAGACCCATTCAAATCCCTTGGGCCACATCTaGATATGGAGAACATTTCCA +
Preference number: 5 (lower is better)
Translates to: PYYKCLYRIRPRGKTHSNPLGHI*IWRTFP
Trigger: TGGAAATGTTCTCCATATCAAGATGTGGCCCAAGGG...ATTTGAATGGGTCTTTCCCCTGGGCCTTATCCTATAGAGGCATTTGTAATATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR CAA 90 bp CTAGTGATTAGGAATCTCTATGAGGAATCTGGTTGGGTAGCAAAGCTCAGGTCCGTGCAATCAGTCTTCTaGAACTTACCATCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: LVIRNLYEESGWVAKLRSVQSVF*NLPSPS
Trigger: AGAAGGAGATGGTAAGTTCAAGAAGACTGATTGCAC...GGACCTGAGCTTTGCTACCCAACCAGATTCCTCATAGAGATTCCTAATCACTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR CAA 90 bp CTAGTGATTAGGAATCTCTATGAGGAATCTGGTTGGGTAGCAAAGCTCAGGTCCTTTCTAGGTGACTTTTaGTTCCACACTATGTGGGCT +
Preference number: 5 (lower is better)
Translates to: LVIRNLYEESGWVAKLRSFLGDF*FHTMWA
Trigger: AGCCCACATAGTGTGGAACAAAAAGTCACCTAGAAA...GGACCTGAGCTTTGCTACCCAACCAGATTCCTCATAGAGATTCCTAATCACTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR CAA 90 bp TGCAGCAAGTCACTAGGAATTGCATGCTGCTCCTATTTGTGGTTAAAACCCTGTGGTCCCATGACTTTTTaGTTGAGCTTCAACATAGCG +
Preference number: 5 (lower is better)
Translates to: CSKSLGIACCSYLWLKPCGPMTF*LSFNIA
Trigger: CGCTATGTTGAAGCTCAACAAAAAAGTCATGGGACC...ACAGGGTTTTAACCACAAATAGGAGCAGCATGCAATTCCTAGTGACTTGCTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR CAA 90 bp GAGGTCAATGATCCAGATTTTCCACAACAATCATCTGCAGCAACAATTCGACAGCCGAATTTTTGCCACTaGTGCAATCTTCTCTGCTTC +
Preference number: 5 (lower is better)
Translates to: EVNDPDFPQQSSAATIRQPNFCH*CNLLCF
Trigger: GAAGCAGAGAAGATTGCACAAGTGGCAAAAATTCGG...CTGTCGAATTGTTGCTGCAGATGATTGTTGTGGAAAATCTGGATCATTGACCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR CAA 90 bp TCCCAGGTGCAATCAGTCTTCTTGAACTTACCATCTCCTTCTCAGTCATCTCTTGCTGAAACCGAATTTTaGCCACTTGTGCAATCTTCT +
Preference number: 5 (lower is better)
Translates to: SQVQSVFLNLPSPSQSSLAETEF*PLVQSS
Trigger: AGAAGATTGCACAAGTGGCAAAAATTCGGTTTCAGC...AAGAGATGACTGAGAAGGAGATGGTAAGTTCAAGAAGACTGATTGCACCTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR CAA 90 bp TCCCAGGTGCAATCAGTCTTCTTGAACTTACCATCTCCTTCTCAGTCATCTCTTGATTACAGTGTATATTaGCCAAAAGGAACACCCCGA +
Preference number: 5 (lower is better)
Translates to: SQVQSVFLNLPSPSQSSLDYSVY*PKGTPR
Trigger: TCGGGGTGTTCCTTTTGGCAAATATACACTGTAATC...AAGAGATGACTGAGAAGGAGATGGTAAGTTCAAGAAGACTGATTGCACCTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS-3UTR CAA 90 bp CTTAGCATCAGACTTTCCTCATTCATGAGTAGCAGTTTAGAAAGGAATACATATTATTCCGGGGTCAACTaGTGCTTGTTTGAGGTGGCA +
Preference number: 5 (lower is better)
Translates to: LSIRLSSFMSSSLERNTYYSGVN*CLFEVA
Trigger: TGCCACCTCAAACAAGCACAAGTTGACCCCGGAATA...ATATGTATTCCTTTCTAAACTGCTACTCATGAATGAGGAAAGTCTGATGCTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
CDS-3UTR CAA 90 bp CTTAGCATCAGACTTTCCTCATTCATGAGTAGCAGTTTAGAAAGGAATACATATGGGGTCAACTTGTGCTaGTTTGAGGTGGCATATTTG +
Preference number: 5 (lower is better)
Translates to: LSIRLSSFMSSSLERNTYGVNLC*FEVAYL
Trigger: CAAATATGCCACCTCAAACAAGCACAAGTTGACCCC...ATATGTATTCCTTTCTAAACTGCTACTCATGAATGAGGAAAGTCTGATGCTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
CDS TCA 72 bp GGAAAGCCGACCCCTCGGCCGCGCCTCACCGATCAGTaGCGCATCGCCCCCGCCCGCACGTGCAGCCGACTC +
Preference number: 6 (lower is better)
Translates to: GKPTPRPRLTDQ*RIAPARTCSRL
Trigger: GAGTCGGCTGCACGTGCGGGCGGGGGCGATGCGTCACTGATCGGTGAGGCGCGGCCGAGGGGTCGGCTTTCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370408.2
ENST00000421367.7
CDS GCA 72 bp CTCATTCTTCCCTTCTGGCTGAGCCCGCTGACCCCTTaGCAACTCCTCCGCCCCCGGAGGCCAGTGGGCCGC +
Preference number: 6 (lower is better)
Translates to: LILPFWLSPLTP*QLLRPRRPVGR
Trigger: GCGGCCCACTGGCCTCCGGGGGCGGAGGAGTTGGCAAGGGGTCAGCGGGCTCAGCCAGAAGGGAAGAATGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS CAA 72 bp CCTCATTCTTCCCTTCTGGCTGAGCCCGCTGACCCCTaGCCAACTCCTCCGCCCCCGGAGGCCAGTGGGCCG +
Preference number: 6 (lower is better)
Translates to: PHSSLLAEPADP*PTPPPPEASGP
Trigger: CGGCCCACTGGCCTCCGGGGGCGGAGGAGTTGGCAAGGGGTCAGCGGGCTCAGCCAGAAGGGAAGAATGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS CAA 72 bp CACCCCCTCCAGTTTCTACCCTCTCCCTCCGGAAACTaGGCGCTCTCTCGCAGGCTGAGCCGGGGAGTCCAG +
Preference number: 6 (lower is better)
Translates to: HPLQFLPSPSGN*ALSRRLSRGVQ
Trigger: CTGGACTCCCCGGCTCAGCCTGCGAGAGAGCGCCAAGTTTCCGGAGGGAGAGGGTAGAAACTGGAGGGGGTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS TCA 72 bp TCTCCCAAGGGTCGCTCCCGGGTGGAAGGCACTAACTaGGAAGAAGCCCAGCCGCAGGCTCGCGAGGAAAGC +
Preference number: 6 (lower is better)
Translates to: SPKGRSRVEGTN*EEAQPQAREES
Trigger: GCTTTCCTCGCGAGCCTGCGGCTGGGCTTCTTCTCAGTTAGTGCCTTCCACCCGGGAGCGACCCTTGGGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS TCA 72 bp CCTCCTGGGAGCGGGAGAAAAGGACCCTCAGTCCCGTaGGTGACAGGTCCACCCCCTCCAGTTTCTACCCTC +
Preference number: 6 (lower is better)
Translates to: PPGSGRKGPSVP*VTGPPPPVSTL
Trigger: GAGGGTAGAAACTGGAGGGGGTGGACCTGTCACTCACGGGACTGAGGGTCCTTTTCTCCCGCTCCCAGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS CCA 72 bp TTCCTGAAACTCCCTCTCCCAAGGGTCGCTCCCGGGTaGAAGGCACTAACTGAGAAGAAGCCCAGCCGCAGG +
Preference number: 6 (lower is better)
Translates to: FLKLPLPRVAPG*KALTEKKPSRR
Trigger: CCTGCGGCTGGGCTTCTTCTCAGTTAGTGCCTTCCACCCGGGAGCGACCCTTGGGAGAGGGAGTTTCAGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS CCA 72 bp AGTACACAGCCAGATGGCCCTCCTCAATCTTGTGGATaGAGGCGTAGAGCAGGACAGCCACCAACCCCACCA +
Preference number: 6 (lower is better)
Translates to: STQPDGPPQSCG*RRRAGQPPTPP
Trigger: TGGTGGGGTTGGTGGCTGTCCTGCTCTACGCCTCCATCCACAAGATTGAGGAGGGCCATCTGGCTGTGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370408.2
ENST00000407654.7
ENST00000421367.7
CDS CCA 72 bp AACCCGGGCTTGAGTCATATTCATTCTCGTTCCTCCTaGGAGCGGGAGAAAAGGACCCTCAGTCCCGTGAGT +
Preference number: 6 (lower is better)
Translates to: NPGLSHIHSRSS*EREKRTLSPVS
Trigger: ACTCACGGGACTGAGGGTCCTTTTCTCCCGCTCCCAGGAGGAACGAGAATGAATATGACTCAAGCCCGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421367.7
CDS CCA 72 bp TTGTTCCCACTTAACCCCTTGGGCCACATCTTGATATaGAGAACATTTCCACCTCTTGCATCAACCTGTGCT +
Preference number: 6 (lower is better)
Translates to: LFPLNPLGHILI*RTFPPLASTCA
Trigger: AGCACAGGTTGATGCAAGAGGTGGAAATGTTCTCCATATCAAGATGTGGCCCAAGGGGTTAAGTGGGAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
CDS TCA 72 bp AATGATTGTTCCCACTTAACCCCTTGGGCCACATCTTaGTATGGAGAACATTTCCACCTCTTGCATCAACCT +
Preference number: 6 (lower is better)
Translates to: NDCSHLTPWATS*YGEHFHLLHQP
Trigger: AGGTTGATGCAAGAGGTGGAAATGTTCTCCATATCAAGATGTGGCCCAAGGGGTTAAGTGGGAACAATCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407654.7
ENST00000421367.7
CDS GCA 72 bp CATCACTTTCTGCTGAAACCGAATTTTTGCCACTTGTaGAATCTTCTCTGCTTCTATAACTGCCTTTTTCCT +
Preference number: 6 (lower is better)
Translates to: HHFLLKPNFCHL*NLLCFYNCLFP
Trigger: AGGAAAAAGGCAGTTATAGAAGCAGAGAAGATTGCACAAGTGGCAAAAATTCGGTTTCAGCAGAAAGTGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370408.2
ENST00000407654.7
ENST00000421367.7
CDS GCA 72 bp TTCTTTTTCCATCACTTTCTGCTGAAACCGAATTTTTaGCACTTGTGCAATCTTCTCTGCTTCTATAACTGC +
Preference number: 6 (lower is better)
Translates to: FFFHHFLLKPNF*HLCNLLCFYNC
Trigger: GCAGTTATAGAAGCAGAGAAGATTGCACAAGTGGCAAAAATTCGGTTTCAGCAGAAAGTGATGGAAAAAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370408.2
ENST00000407654.7
ENST00000421367.7
CDS CAA 72 bp TTCCATCACTTTCTGCTGAAACCGAATTTTTGCCACTaGTGCAATCTTCTCTGCTTCTATAACTGCCTTTTT +
Preference number: 6 (lower is better)
Translates to: FHHFLLKPNFCH*CNLLCFYNCLF
Trigger: AAAAAGGCAGTTATAGAAGCAGAGAAGATTGCACAAGTGGCAAAAATTCGGTTTCAGCAGAAAGTGATGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370408.2
ENST00000407654.7
ENST00000421367.7