RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ERLEC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000068912

Ensembl transcript IDs: ENST00000185150.9, ENST00000378239.5, ENST00000405123.7, ENST00000494373.1

Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AATAAGAGTTTCTTGAGATTAACAAGGGTGAGGACAACTCCCATGTaGGCCTCTACCATGTGCCCAGTTTCTAGTTTAACTACTTGCAGA +
Preference number: 1 (lower is better)
Translates to: NKSFLRLTRVRTTPM*ASTMCPVSSLTTCR
Trigger: TCTGCAAGTAGTTAAACTAGAAACTGGGCACATGGTAGAGGCTCACATGGGAGTTGTCCTCACCCTTGTTAATCTCAAGAAACTCTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185150.9
ENST00000378239.5
3UTR-3UTR GCA 90 bp GTTAGAGTAAACCATTCTGAGTCTCAGAAGCATCACCAACTGTCTACATCAGATTCTAGTTTAACTACTTaGAGAGAGCAGTTGCTATAT +
Preference number: 2 (lower is better)
Translates to: VRVNHSESQKHHQLSTSDSSLTT*REQLLY
Trigger: ATATAGCAACTGCTCTCTGCAAGTAGTTAAACTAGA...ATCTGATGTAGACAGTTGGTGATGCTTCTGAGACTCAGAATGGTTTACTCTAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185150.9
ENST00000378239.5
3UTR-3UTR CCA 90 bp GTTAGAGTAAACCATTCTGAGTCTCAGAAGCATCACCAACTGTCTACATCAGATTATAATGAGACACAGTaGGACAGAAATTATCATGAC +
Preference number: 2 (lower is better)
Translates to: VRVNHSESQKHHQLSTSDYNETQ*DRNYHD
Trigger: GTCATGATAATTTCTGTCCCACTGTGTCTCATTATA...ATCTGATGTAGACAGTTGGTGATGCTTCTGAGACTCAGAATGGTTTACTCTAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185150.9
ENST00000378239.5
3UTR CAA 90 bp TCTACCATGTGCCCAGTTTCTAGTTTAACTACTTGCAGAGAGCAGTaGCTATATAAAAATCTGTTGAAAGGATTTCAGGTACTAGAATTT +
Preference number: 2 (lower is better)
Translates to: STMCPVSSLTTCREQ*LYKNLLKGFQVLEF
Trigger: AAATTCTAGTACCTGAAATCCTTTCAACAGATTTTTATATAGCAACTGCTCTCTGCAAGTAGTTAAACTAGAAACTGGGCACATGGTAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000185150.9
ENST00000378239.5
CDS-3UTR TCA 90 bp TCCTTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACAATGTCATCGCTGAGTTaGGGAAGGGCTCGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: SFRRGPMAENSIMRHSGTMSSLS*GRARPP
Trigger: CGGCGGCCGAGCCCTTCCTCAACTCAGCGATGACAT...TGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR TCA 90 bp TCCTTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACACGGTGCCGGGCCAGTTaGCTCGGAAAGGGATGTCAT +
Preference number: 4 (lower is better)
Translates to: SFRRGPMAENSIMRHSGTRCRAS*LGKGCH
Trigger: ATGACATCCCTTTCCGAGTCAACTGGCCCGGCACCG...TGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR TCA 90 bp ATACCATCCTTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTATGTCATCGCTGAGTTaGGGAAGGGCTCGGCCGCCG +
Preference number: 4 (lower is better)
Translates to: IPSFRRGPMAENSIMRHSMSSLS*GRARPP
Trigger: CGGCGGCCGAGCCCTTCCTCAACTCAGCGATGACAT...ACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAAGGATGGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR TCA 90 bp TCCTTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACAAAGGGATGTCATCGCTaGGTTGAGGAAGGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: SFRRGPMAENSIMRHSGTKGCHR*VEEGLG
Trigger: GCCGAGCCCTTCCTCAACTCAGCGATGACATCCCTT...TGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR TCA 90 bp TTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACAGAACGGTGCCGGGCCAGTTaGCTCGGAAAGGGATGTCAT +
Preference number: 4 (lower is better)
Translates to: FRRGPMAENSIMRHSGTERCRAS*LGKGCH
Trigger: ATGACATCCCTTTCCGAGTCAACTGGCCCGGCACCG...TTCTGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR TCA 90 bp TCCTTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACAGGGTTGTCCCAACAGTaGGCACTGGCTGAGAGCCAA +
Preference number: 4 (lower is better)
Translates to: SFRRGPMAENSIMRHSGTGLSQQ*ALAESQ
Trigger: TTGGCTCTCAGCCAGTGCTCACTGTTGGGACAACCC...TGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185150.9
ENST00000405123.7
CDS-3UTR TCA 90 bp AGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACAGAAATTATCAAGGGATGTCATCGCTaGGTTGAGGAAGGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: RGPMAENSIMRHSGTEIIKGCHR*VEEGLG
Trigger: GCCGAGCCCTTCCTCAACTCAGCGATGACATCCCTT...GATAATTTCTGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR TCA 90 bp TTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACAGAAGGGTTGTCCCAACAGTaGGCACTGGCTGAGAGCCAA +
Preference number: 4 (lower is better)
Translates to: FRRGPMAENSIMRHSGTEGLSQQ*ALAESQ
Trigger: TTGGCTCTCAGCCAGTGCTCACTGTTGGGACAACCC...TTCTGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185150.9
ENST00000405123.7
CDS-3UTR TCA 90 bp GTTAGAGTAAACCATTCTGAGTCTCAGAAGCATCACCAACTGTCTACATCAGATAAGGGATGTCATCGCTaGGTTGAGGAAGGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: VRVNHSESQKHHQLSTSDKGCHR*VEEGLG
Trigger: GCCGAGCCCTTCCTCAACTCAGCGATGACATCCCTT...ATCTGATGTAGACAGTTGGTGATGCTTCTGAGACTCAGAATGGTTTACTCTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185150.9
ENST00000378239.5
CDS-3UTR TCA 90 bp TCCTTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACAACAGTGAGCACTGGCTaGGAGCCAATAGCAATCGAC +
Preference number: 4 (lower is better)
Translates to: SFRRGPMAENSIMRHSGTTVSTG*EPIAID
Trigger: GTCGATTGCTATTGGCTCTCAGCCAGTGCTCACTGT...TGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185150.9
ENST00000405123.7
CDS-3UTR TCA 90 bp AGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACAGAAATTATCACAGTGAGCACTGGCTaGGAGCCAATAGCAATCGAC +
Preference number: 4 (lower is better)
Translates to: RGPMAENSIMRHSGTEIITVSTG*EPIAID
Trigger: GTCGATTGCTATTGGCTCTCAGCCAGTGCTCACTGT...GATAATTTCTGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185150.9
ENST00000405123.7
CDS-3UTR TCA 90 bp ATACCATCCTTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTAGGACAACTCCCATGTaGGCCTCTACCATGTGCCCA +
Preference number: 4 (lower is better)
Translates to: IPSFRRGPMAENSIMRHSRTTPM*ASTMCP
Trigger: TGGGCACATGGTAGAGGCTCACATGGGAGTTGTCCT...ACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAAGGATGGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185150.9
ENST00000378239.5
CDS-3UTR TCA 90 bp GTTAGAGTAAACCATTCTGAGTCTCAGAAGCATCACCAACTGTCTACATCAGATAGGACAACTCCCATGTaGGCCTCTACCATGTGCCCA +
Preference number: 4 (lower is better)
Translates to: VRVNHSESQKHHQLSTSDRTTPM*ASTMCP
Trigger: TGGGCACATGGTAGAGGCTCACATGGGAGTTGTCCT...ATCTGATGTAGACAGTTGGTGATGCTTCTGAGACTCAGAATGGTTTACTCTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185150.9
ENST00000378239.5
CDS-3UTR TCA 90 bp TCCTTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACAGTACATCACAGTACTTaGTCTGGGCCGGTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: SFRRGPMAENSIMRHSGTVHHST*SGPVLF
Trigger: AAACAGAACCGGCCCAGATCAAGTACTGTGATGTAC...TGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR GCA 90 bp TTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACAGAACTTAGTATTTCTTCCTaGTGCTCCAGCTGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: FRRGPMAENSIMRHSGTELSISS*CSSCLR
Trigger: CCTGAGGCAGCTGGAGCAGCAGGAAGAAATACTAAG...TTCTGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR TCA 90 bp ATACCATCCTTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTCTGATTCTTTGCACCTaGCTGTCTGGGTACCATCGT +
Preference number: 4 (lower is better)
Translates to: IPSFRRGPMAENSIMRHSLILCT*LSGYHR
Trigger: ACGATGGTACCCAGACAGTCAGGTGCAAAGAATCAG...ACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAAGGATGGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405123.7
CDS-3UTR GCA 90 bp GTTAGAGTAAACCATTCTGAGTCTCAGAAGCATCACCAACTGTCTACATCAGATCTTAGTATTTCTTCCTaGTGCTCCAGCTGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: VRVNHSESQKHHQLSTSDLSISS*CSSCLR
Trigger: CCTGAGGCAGCTGGAGCAGCAGGAAGAAATACTAAG...ATCTGATGTAGACAGTTGGTGATGCTTCTGAGACTCAGAATGGTTTACTCTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185150.9
ENST00000378239.5
CDS-3UTR CCA 90 bp TCCTTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACATCCCACAGGATAGTATaGTGTCATCTGACCTTCGAT +
Preference number: 4 (lower is better)
Translates to: SFRRGPMAENSIMRHSGTSHRIV*CHLTFD
Trigger: ATCGAAGGTCAGATGACACCATACTATCCTGTGGGA...TGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR CCA 90 bp TCCTTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACATCAATATGCTCTTCTTaGTTCCATGTCCCGACAACC +
Preference number: 4 (lower is better)
Translates to: SFRRGPMAENSIMRHSGTSICSS*FHVPTT
Trigger: GGTTGTCGGGACATGGAACCAAGAAGAGCATATTGA...TGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR TCA 90 bp ATACCATCCTTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGTACATCACAGTACTTaGTCTGGGCCGGTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: IPSFRRGPMAENSIMRHSVHHST*SGPVLF
Trigger: AAACAGAACCGGCCCAGATCAAGTACTGTGATGTAC...ACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAAGGATGGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR TCA 90 bp GTTAGAGTAAACCATTCTGAGTCTCAGAAGCATCACCAACTGTCTACATCAGATGTACATCACAGTACTTaGTCTGGGCCGGTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: VRVNHSESQKHHQLSTSDVHHST*SGPVLF
Trigger: AAACAGAACCGGCCCAGATCAAGTACTGTGATGTAC...ATCTGATGTAGACAGTTGGTGATGCTTCTGAGACTCAGAATGGTTTACTCTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185150.9
ENST00000378239.5
CDS-3UTR CCA 90 bp AGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACAGAAATTATCTCACAGTACTTGATCTaGGCCGGTTCTGTTTCAAAC +
Preference number: 4 (lower is better)
Translates to: RGPMAENSIMRHSGTEIISQYLI*AGSVSN
Trigger: GTTTGAAACAGAACCGGCCCAGATCAAGTACTGTGA...GATAATTTCTGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR CCA 90 bp TTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACAGAATCACAGTACTTGATCTaGGCCGGTTCTGTTTCAAAC +
Preference number: 4 (lower is better)
Translates to: FRRGPMAENSIMRHSGTESQYLI*AGSVSN
Trigger: GTTTGAAACAGAACCGGCCCAGATCAAGTACTGTGA...TTCTGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR CCA 90 bp TCCTTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACACGACTTGTGGATCGCTaGAAATCTCTCTTCTTTAGT +
Preference number: 4 (lower is better)
Translates to: SFRRGPMAENSIMRHSGTRLVDR*KSLFFS
Trigger: ACTAAAGAAGAGAGATTTCCAGCGATCCACAAGTCG...TGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185150.9
ENST00000405123.7
CDS-3UTR CCA 90 bp AGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACAGAAATTATCGTCAATTTGGATATGTaGGTTGTCCCAACAGTGAGC +
Preference number: 4 (lower is better)
Translates to: RGPMAENSIMRHSGTEIIVNLDM*VVPTVS
Trigger: GCTCACTGTTGGGACAACCCACATATCCAAATTGAC...GATAATTTCTGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185150.9
ENST00000405123.7
CDS-3UTR CCA 90 bp TTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACAGAATCAATATGCTCTTCTTaGTTCCATGTCCCGACAACC +
Preference number: 4 (lower is better)
Translates to: FRRGPMAENSIMRHSGTESICSS*FHVPTT
Trigger: GGTTGTCGGGACATGGAACCAAGAAGAGCATATTGA...TTCTGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR TCA 90 bp TTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACAGAAAACCTATATTTAGGATaGCTGCACAAGAGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: FRRGPMAENSIMRHSGTENLYLG*LHKSGV
Trigger: GACACCACTCTTGTGCAGTCATCCTAAATATAGGTT...TTCTGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR TCA 90 bp TTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACAGAAAAGAGGTCCAATGGCTaGGAACTCTATAATGAGACA +
Preference number: 4 (lower is better)
Translates to: FRRGPMAENSIMRHSGTEKRSNG*ELYNET
Trigger: TGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTT...TTCTGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR GCA 90 bp TCCTTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACAGTCATTCACAGGAGATaGTCTGAACCTATATTTAGG +
Preference number: 4 (lower is better)
Translates to: SFRRGPMAENSIMRHSGTVIHRR*SEPIFR
Trigger: CCTAAATATAGGTTCAGAGCATCTCCTGTGAATGAC...TGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR CCA 90 bp ATACCATCCTTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTTCCCACAGGATAGTATaGTGTCATCTGACCTTCGAT +
Preference number: 4 (lower is better)
Translates to: IPSFRRGPMAENSIMRHSSHRIV*CHLTFD
Trigger: ATCGAAGGTCAGATGACACCATACTATCCTGTGGGA...ACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAAGGATGGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR CCA 90 bp ATACCATCCTTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTTCACAGTACTTGATCTaGGCCGGTTCTGTTTCAAAC +
Preference number: 4 (lower is better)
Translates to: IPSFRRGPMAENSIMRHSSQYLI*AGSVSN
Trigger: GTTTGAAACAGAACCGGCCCAGATCAAGTACTGTGA...ACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAAGGATGGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR CCA 90 bp TTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACAGAAATAGCAATCGACTTGTaGATCGCTGGAAATCTCTCT +
Preference number: 4 (lower is better)
Translates to: FRRGPMAENSIMRHSGTEIAIDL*IAGNLS
Trigger: AGAGAGATTTCCAGCGATCCACAAGTCGATTGCTAT...TTCTGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185150.9
ENST00000405123.7
CDS-3UTR CCA 90 bp ATACCATCCTTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGTCAATTTGGATATGTaGGTTGTCCCAACAGTGAGC +
Preference number: 4 (lower is better)
Translates to: IPSFRRGPMAENSIMRHSVNLDM*VVPTVS
Trigger: GCTCACTGTTGGGACAACCCACATATCCAAATTGAC...ACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAAGGATGGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185150.9
ENST00000405123.7
CDS-3UTR TCA 90 bp GTTAGAGTAAACCATTCTGAGTCTCAGAAGCATCACCAACTGTCTACATCAGATAACCTATATTTAGGATaGCTGCACAAGAGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: VRVNHSESQKHHQLSTSDNLYLG*LHKSGV
Trigger: GACACCACTCTTGTGCAGTCATCCTAAATATAGGTT...ATCTGATGTAGACAGTTGGTGATGCTTCTGAGACTCAGAATGGTTTACTCTAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185150.9
ENST00000378239.5
CDS-3UTR TCA 90 bp ATACCATCCTTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTAACCTATATTTAGGATaGCTGCACAAGAGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: IPSFRRGPMAENSIMRHSNLYLG*LHKSGV
Trigger: GACACCACTCTTGTGCAGTCATCCTAAATATAGGTT...ACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAAGGATGGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR TCA 90 bp TTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACAGAATGGAGATCCTGGCAGTaGTTGACAAAATATGTCATT +
Preference number: 4 (lower is better)
Translates to: FRRGPMAENSIMRHSGTEWRSWQ*LTKYVI
Trigger: AATGACATATTTTGTCAATCACTGCCAGGATCTCCA...TTCTGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR TCA 90 bp AGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACAGAAATTATCTGGAGATCCTGGCAGTaGTTGACAAAATATGTCATT +
Preference number: 4 (lower is better)
Translates to: RGPMAENSIMRHSGTEIIWRSWQ*LTKYVI
Trigger: AATGACATATTTTGTCAATCACTGCCAGGATCTCCA...GATAATTTCTGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR TCA 90 bp TCCTTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACATATACAGTAACAGCATaGGGTGAATCTGATTCTTTG +
Preference number: 4 (lower is better)
Translates to: SFRRGPMAENSIMRHSGTYTVTA*GESDSL
Trigger: CAAAGAATCAGATTCACCTCATGCTGTTACTGTATA...TGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR TCA 90 bp ATACCATCCTTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTAAGAGGTCCAATGGCTaGGAACTCTATAATGAGACA +
Preference number: 4 (lower is better)
Translates to: IPSFRRGPMAENSIMRHSKRSNG*ELYNET
Trigger: TGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTT...ACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAAGGATGGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR TCA 90 bp GTTAGAGTAAACCATTCTGAGTCTCAGAAGCATCACCAACTGTCTACATCAGATAAGAGGTCCAATGGCTaGGAACTCTATAATGAGACA +
Preference number: 4 (lower is better)
Translates to: VRVNHSESQKHHQLSTSDKRSNG*ELYNET
Trigger: TGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTT...ATCTGATGTAGACAGTTGGTGATGCTTCTGAGACTCAGAATGGTTTACTCTAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185150.9
ENST00000378239.5
CDS-3UTR GCA 90 bp TCCTTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACAAGCGAGACAAATGTCTaGCTCAGAAGTTTATCAATA +
Preference number: 4 (lower is better)
Translates to: SFRRGPMAENSIMRHSGTSETNV*LRSLSI
Trigger: TATTGATAAACTTCTGAGGCAGACATTTGTCTCGCT...TGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR GCA 90 bp TCCTTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACAGGCTGGACTCTAACTTaGTTGGATGAGATTTATTTT +
Preference number: 4 (lower is better)
Translates to: SFRRGPMAENSIMRHSGTGWTLT*LDEIYF
Trigger: AAAATAAATCTCATCCAAGCAAGTTAGAGTCCAGCC...TGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185150.9
ENST00000378239.5
CDS-3UTR CCA 90 bp TTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACAGAACTCCAAAAGCTCTCTTaGATTAGGGCCTTTATAATC +
Preference number: 4 (lower is better)
Translates to: FRRGPMAENSIMRHSGTELQKLS*IRAFII
Trigger: GATTATAAAGGCCCTAATCCAAGAGAGCTTTTGGAG...TTCTGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR CCA 90 bp AGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACAGAAATTATCCTCCAAAAGCTCTCTTaGATTAGGGCCTTTATAATC +
Preference number: 4 (lower is better)
Translates to: RGPMAENSIMRHSGTEIILQKLS*IRAFII
Trigger: GATTATAAAGGCCCTAATCCAAGAGAGCTTTTGGAG...GATAATTTCTGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR CCA 90 bp TTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACAGAAATGACTGCACAAGAGTaGTGTCAAAATGACAACTTC +
Preference number: 4 (lower is better)
Translates to: FRRGPMAENSIMRHSGTEMTAQE*CQNDNF
Trigger: GAAGTTGTCATTTTGACACCACTCTTGTGCAGTCAT...TTCTGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR CCA 90 bp ATACCATCCTTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTCGACTTGTGGATCGCTaGAAATCTCTCTTCTTTAGT +
Preference number: 4 (lower is better)
Translates to: IPSFRRGPMAENSIMRHSRLVDR*KSLFFS
Trigger: ACTAAAGAAGAGAGATTTCCAGCGATCCACAAGTCG...ACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAAGGATGGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185150.9
ENST00000405123.7
CDS-3UTR CCA 90 bp ATACCATCCTTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTATAGCAATCGACTTGTaGATCGCTGGAAATCTCTCT +
Preference number: 4 (lower is better)
Translates to: IPSFRRGPMAENSIMRHSIAIDL*IAGNLS
Trigger: AGAGAGATTTCCAGCGATCCACAAGTCGATTGCTAT...ACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAAGGATGGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185150.9
ENST00000405123.7
CDS-3UTR TCA 90 bp TTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACAGAATGCTTAGATTCAGGATaGCATATGTACATCACAGTA +
Preference number: 4 (lower is better)
Translates to: FRRGPMAENSIMRHSGTECLDSG*HMYITV
Trigger: TACTGTGATGTACATATGTCATCCTGAATCTAAGCA...TTCTGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR TCA 90 bp AGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACAGAAATTATCTGCTTAGATTCAGGATaGCATATGTACATCACAGTA +
Preference number: 4 (lower is better)
Translates to: RGPMAENSIMRHSGTEIICLDSG*HMYITV
Trigger: TACTGTGATGTACATATGTCATCCTGAATCTAAGCA...GATAATTTCTGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR TCA 90 bp AGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACAGAAATTATCAGAGTGGTGTCAAAATaGCAACTTCATATTCACAAG +
Preference number: 4 (lower is better)
Translates to: RGPMAENSIMRHSGTEIIRVVSK*QLHIHK
Trigger: CTTGTGAATATGAAGTTGTCATTTTGACACCACTCT...GATAATTTCTGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR TCA 90 bp AGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACAGAAATTATCTATACAGTAACAGCATaGGGTGAATCTGATTCTTTG +
Preference number: 4 (lower is better)
Translates to: RGPMAENSIMRHSGTEIIYTVTA*GESDSL
Trigger: CAAAGAATCAGATTCACCTCATGCTGTTACTGTATA...GATAATTTCTGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR GCA 90 bp GTTAGAGTAAACCATTCTGAGTCTCAGAAGCATCACCAACTGTCTACATCAGATTTAGCCCATTCAATATaGTCTTCTTGGTTCCATGTC +
Preference number: 4 (lower is better)
Translates to: VRVNHSESQKHHQLSTSDLAHSI*SSWFHV
Trigger: GACATGGAACCAAGAAGAGCATATTGAATGGGCTAA...ATCTGATGTAGACAGTTGGTGATGCTTCTGAGACTCAGAATGGTTTACTCTAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185150.9
ENST00000378239.5
CDS-3UTR GCA 90 bp ATACCATCCTTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTTTAGCCCATTCAATATaGTCTTCTTGGTTCCATGTC +
Preference number: 4 (lower is better)
Translates to: IPSFRRGPMAENSIMRHSLAHSI*SSWFHV
Trigger: GACATGGAACCAAGAAGAGCATATTGAATGGGCTAA...ACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAAGGATGGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR GCA 90 bp TTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACAGAAAGCGAGACAAATGTCTaGCTCAGAAGTTTATCAATA +
Preference number: 4 (lower is better)
Translates to: FRRGPMAENSIMRHSGTESETNV*LRSLSI
Trigger: TATTGATAAACTTCTGAGGCAGACATTTGTCTCGCT...TTCTGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR CCA 90 bp GTTAGAGTAAACCATTCTGAGTCTCAGAAGCATCACCAACTGTCTACATCAGATCTCCAAAAGCTCTCTTaGATTAGGGCCTTTATAATC +
Preference number: 4 (lower is better)
Translates to: VRVNHSESQKHHQLSTSDLQKLS*IRAFII
Trigger: GATTATAAAGGCCCTAATCCAAGAGAGCTTTTGGAG...ATCTGATGTAGACAGTTGGTGATGCTTCTGAGACTCAGAATGGTTTACTCTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185150.9
ENST00000378239.5
CDS-3UTR CCA 90 bp AGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACAGAAATTATCGTTTCTTTCTCTTCATaGTACTGCCGAATGTGTTTT +
Preference number: 4 (lower is better)
Translates to: RGPMAENSIMRHSGTEIIVSFSS*YCRMCF
Trigger: AAAACACATTCGGCAGTACCATGAAGAGAAAGAAAC...GATAATTTCTGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR CCA 90 bp ATACCATCCTTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTATGACTGCACAAGAGTaGTGTCAAAATGACAACTTC +
Preference number: 4 (lower is better)
Translates to: IPSFRRGPMAENSIMRHSMTAQE*CQNDNF
Trigger: GAAGTTGTCATTTTGACACCACTCTTGTGCAGTCAT...ACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAAGGATGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR TCA 90 bp ATACCATCCTTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTTGCTTAGATTCAGGATaGCATATGTACATCACAGTA +
Preference number: 4 (lower is better)
Translates to: IPSFRRGPMAENSIMRHSCLDSG*HMYITV
Trigger: TACTGTGATGTACATATGTCATCCTGAATCTAAGCA...ACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAAGGATGGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR GCA 90 bp ATACCATCCTTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTAGCGAGACAAATGTCTaGCTCAGAAGTTTATCAATA +
Preference number: 4 (lower is better)
Translates to: IPSFRRGPMAENSIMRHSSETNV*LRSLSI
Trigger: TATTGATAAACTTCTGAGGCAGACATTTGTCTCGCT...ACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAAGGATGGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR GCA 90 bp GTTAGAGTAAACCATTCTGAGTCTCAGAAGCATCACCAACTGTCTACATCAGATGGCTGGACTCTAACTTaGTTGGATGAGATTTATTTT +
Preference number: 4 (lower is better)
Translates to: VRVNHSESQKHHQLSTSDGWTLT*LDEIYF
Trigger: AAAATAAATCTCATCCAAGCAAGTTAGAGTCCAGCC...ATCTGATGTAGACAGTTGGTGATGCTTCTGAGACTCAGAATGGTTTACTCTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185150.9
ENST00000378239.5
CDS-3UTR GCA 90 bp TTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACAGAATCTAGTTTAACTACTTaGAGAGAGCAGTTGCTATAT +
Preference number: 4 (lower is better)
Translates to: FRRGPMAENSIMRHSGTESSLTT*REQLLY
Trigger: ATATAGCAACTGCTCTCTGCAAGTAGTTAAACTAGA...TTCTGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185150.9
ENST00000378239.5
CDS-3UTR CCA 90 bp GTTAGAGTAAACCATTCTGAGTCTCAGAAGCATCACCAACTGTCTACATCAGATGTTTCTTTCTCTTCATaGTACTGCCGAATGTGTTTT +
Preference number: 4 (lower is better)
Translates to: VRVNHSESQKHHQLSTSDVSFSS*YCRMCF
Trigger: AAAACACATTCGGCAGTACCATGAAGAGAAAGAAAC...ATCTGATGTAGACAGTTGGTGATGCTTCTGAGACTCAGAATGGTTTACTCTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185150.9
ENST00000378239.5
CDS-3UTR CCA 90 bp AGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACAGAAATTATCTATAATGAGACACAGTaGGACAGAAATTATCATGAC +
Preference number: 4 (lower is better)
Translates to: RGPMAENSIMRHSGTEIIYNETQ*DRNYHD
Trigger: GTCATGATAATTTCTGTCCCACTGTGTCTCATTATA...GATAATTTCTGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR GCA 90 bp ATACCATCCTTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTTCTAGTTTAACTACTTaGAGAGAGCAGTTGCTATAT +
Preference number: 4 (lower is better)
Translates to: IPSFRRGPMAENSIMRHSSSLTT*REQLLY
Trigger: ATATAGCAACTGCTCTCTGCAAGTAGTTAAACTAGA...ACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAAGGATGGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185150.9
ENST00000378239.5
3UTR CAA 72 bp TGCCCAGTTTCTAGTTTAACTACTTGCAGAGAGCAGTaGCTATATAAAAATCTGTTGAAAGGATTTCAGGTA +
Preference number: 4 (lower is better)
Translates to: CPVSSLTTCREQ*LYKNLLKGFQV
Trigger: TACCTGAAATCCTTTCAACAGATTTTTATATAGCAACTGCTCTCTGCAAGTAGTTAAACTAGAAACTGGGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000185150.9
ENST00000378239.5
CDS CCA 90 bp CCACAACCTCCTCTGCTCCAGGAGGAGAGGAGGAGGAGGAGGAGGTaGAGGAGGAGGCGGCGGGACTATAAAGCGCCCGGGTATCACCGG +
Preference number: 5 (lower is better)
Translates to: PQPPLLQEERRRRRR*RRRRRDYKAPGYHR
Trigger: CCGGTGATACCCGGGCGCTTTATAGTCCCGCCGCCTCCTCCTCCACCTCCTCCTCCTCCTCCTCTCCTCCTGGAGCAGAGGAGGTTGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
ENST00000494373.1
CDS-3UTR CAA 90 bp TCCTTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACAGATGTCATCGCTGAGTaGAGGAAGGGCTCGGCCGCC +
Preference number: 5 (lower is better)
Translates to: SFRRGPMAENSIMRHSGTDVIAE*RKGSAA
Trigger: GGCGGCCGAGCCCTTCCTCAACTCAGCGATGACATC...TGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR CAA 90 bp AGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACAGAAATTATCGATGTCATCGCTGAGTaGAGGAAGGGCTCGGCCGCC +
Preference number: 5 (lower is better)
Translates to: RGPMAENSIMRHSGTEIIDVIAE*RKGSAA
Trigger: GGCGGCCGAGCCCTTCCTCAACTCAGCGATGACATC...GATAATTTCTGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR CAA 90 bp TTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACAGAATCGGTGCCGGGCCAGTaGACTCGGAAAGGGATGTCA +
Preference number: 5 (lower is better)
Translates to: FRRGPMAENSIMRHSGTESVPGQ*TRKGMS
Trigger: TGACATCCCTTTCCGAGTCAACTGGCCCGGCACCGA...TTCTGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR CAA 90 bp AGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACAGAAATTATCTCGGTGCCGGGCCAGTaGACTCGGAAAGGGATGTCA +
Preference number: 5 (lower is better)
Translates to: RGPMAENSIMRHSGTEIISVPGQ*TRKGMS
Trigger: TGACATCCCTTTCCGAGTCAACTGGCCCGGCACCGA...GATAATTTCTGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR CAA 90 bp GTTAGAGTAAACCATTCTGAGTCTCAGAAGCATCACCAACTGTCTACATCAGATTCGGTGCCGGGCCAGTaGACTCGGAAAGGGATGTCA +
Preference number: 5 (lower is better)
Translates to: VRVNHSESQKHHQLSTSDSVPGQ*TRKGMS
Trigger: TGACATCCCTTTCCGAGTCAACTGGCCCGGCACCGA...ATCTGATGTAGACAGTTGGTGATGCTTCTGAGACTCAGAATGGTTTACTCTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185150.9
ENST00000378239.5
CDS TCA 90 bp CTCCAGCTGCCTCAGGGTGAGGGGCTTAAATGGAGATCCTGGCAGTaGTTGACAAAATATGTCATTCACAGGAGATGCTCTGAACCTATA +
Preference number: 5 (lower is better)
Translates to: LQLPQGEGLKWRSWQ*LTKYVIHRRCSEPI
Trigger: TATAGGTTCAGAGCATCTCCTGTGAATGACATATTTTGTCAATCACTGCCAGGATCTCCATTTAAGCCCCTCACCCTGAGGCAGCTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS TCA 90 bp TCTGTCAATTTGGATATGTGGGTTGTCCCAACAGTGAGCACTGGCTaGGAGCCAATAGCAATCGACTTGTGGATCGCTGGAAATCTCTCT +
Preference number: 5 (lower is better)
Translates to: SVNLDMWVVPTVSTG*EPIAIDLWIAGNLS
Trigger: AGAGAGATTTCCAGCGATCCACAAGTCGATTGCTATTGGCTCTCAGCCAGTGCTCACTGTTGGGACAACCCACATATCCAAATTGACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185150.9
ENST00000405123.7
CDS-3UTR CAA 90 bp TCCTTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACACTGGGTACCATCGTCTaGAAGATGATAAGCTCTAGC +
Preference number: 5 (lower is better)
Translates to: SFRRGPMAENSIMRHSGTLGTIV*KMISSS
Trigger: GCTAGAGCTTATCATCTTCAAGACGATGGTACCCAG...TGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR CAA 90 bp TCCTTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACAGGTGAATCTGATTCTTaGCACCTGACTGTCTGGGTA +
Preference number: 5 (lower is better)
Translates to: SFRRGPMAENSIMRHSGTGESDS*HLTVWV
Trigger: TACCCAGACAGTCAGGTGCAAAGAATCAGATTCACC...TGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405123.7
CDS-3UTR CAA 90 bp TCCTTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACATATATAAAACTCCAGTaGTGGGCAGAGAGAACTCGG +
Preference number: 5 (lower is better)
Translates to: SFRRGPMAENSIMRHSGTYIKLQ*WAERTR
Trigger: CCGAGTTCTCTCTGCCCACAACTGGAGTTTTATATA...TGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR CAA 90 bp AGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACAGAAATTATCTGTACATCACAGTACTaGATCTGGGCCGGTTCTGTT +
Preference number: 5 (lower is better)
Translates to: RGPMAENSIMRHSGTEIICTSQY*IWAGSV
Trigger: AACAGAACCGGCCCAGATCAAGTACTGTGATGTACA...GATAATTTCTGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR CAA 90 bp AGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACAGAAATTATCCCAATAGCAATCGACTaGTGGATCGCTGGAAATCTC +
Preference number: 5 (lower is better)
Translates to: RGPMAENSIMRHSGTEIIPIAID*WIAGNL
Trigger: GAGATTTCCAGCGATCCACAAGTCGATTGCTATTGG...GATAATTTCTGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185150.9
ENST00000405123.7
CDS-3UTR CAA 90 bp TTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACAGAACCAATAGCAATCGACTaGTGGATCGCTGGAAATCTC +
Preference number: 5 (lower is better)
Translates to: FRRGPMAENSIMRHSGTEPIAID*WIAGNL
Trigger: GAGATTTCCAGCGATCCACAAGTCGATTGCTATTGG...TTCTGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185150.9
ENST00000405123.7
CDS-3UTR CAA 90 bp AGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACAGAAATTATCCTGGGTACCATCGTCTaGAAGATGATAAGCTCTAGC +
Preference number: 5 (lower is better)
Translates to: RGPMAENSIMRHSGTEIILGTIV*KMISSS
Trigger: GCTAGAGCTTATCATCTTCAAGACGATGGTACCCAG...GATAATTTCTGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR CAA 90 bp TTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACAGAATATATAAAACTCCAGTaGTGGGCAGAGAGAACTCGG +
Preference number: 5 (lower is better)
Translates to: FRRGPMAENSIMRHSGTEYIKLQ*WAERTR
Trigger: CCGAGTTCTCTCTGCCCACAACTGGAGTTTTATATA...TTCTGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR CAA 90 bp AGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACAGAAATTATCTATATAAAACTCCAGTaGTGGGCAGAGAGAACTCGG +
Preference number: 5 (lower is better)
Translates to: RGPMAENSIMRHSGTEIIYIKLQ*WAERTR
Trigger: CCGAGTTCTCTCTGCCCACAACTGGAGTTTTATATA...GATAATTTCTGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR CAA 90 bp GTTAGAGTAAACCATTCTGAGTCTCAGAAGCATCACCAACTGTCTACATCAGATTGTACATCACAGTACTaGATCTGGGCCGGTTCTGTT +
Preference number: 5 (lower is better)
Translates to: VRVNHSESQKHHQLSTSDCTSQY*IWAGSV
Trigger: AACAGAACCGGCCCAGATCAAGTACTGTGATGTACA...ATCTGATGTAGACAGTTGGTGATGCTTCTGAGACTCAGAATGGTTTACTCTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185150.9
ENST00000378239.5
CDS-3UTR CAA 90 bp AGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACAGAAATTATCTTCAATATGCTCTTCTaGGTTCCATGTCCCGACAAC +
Preference number: 5 (lower is better)
Translates to: RGPMAENSIMRHSGTEIIFNMLF*VPCPDN
Trigger: GTTGTCGGGACATGGAACCAAGAAGAGCATATTGAA...GATAATTTCTGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR CAA 90 bp TTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACAGAATTCAATATGCTCTTCTaGGTTCCATGTCCCGACAAC +
Preference number: 5 (lower is better)
Translates to: FRRGPMAENSIMRHSGTEFNMLF*VPCPDN
Trigger: GTTGTCGGGACATGGAACCAAGAAGAGCATATTGAA...TTCTGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR CAA 90 bp GTTAGAGTAAACCATTCTGAGTCTCAGAAGCATCACCAACTGTCTACATCAGATCTGGGTACCATCGTCTaGAAGATGATAAGCTCTAGC +
Preference number: 5 (lower is better)
Translates to: VRVNHSESQKHHQLSTSDLGTIV*KMISSS
Trigger: GCTAGAGCTTATCATCTTCAAGACGATGGTACCCAG...ATCTGATGTAGACAGTTGGTGATGCTTCTGAGACTCAGAATGGTTTACTCTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185150.9
ENST00000378239.5
CDS-3UTR CAA 90 bp TCCTTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACAGGTGAATCTGATTCTTaGCACTTTAGTTTTACAGTC +
Preference number: 5 (lower is better)
Translates to: SFRRGPMAENSIMRHSGTGESDS*HFSFTV
Trigger: GACTGTAAAACTAAAGTGCAAAGAATCAGATTCACC...TGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185150.9
ENST00000378239.5
CDS TCA 90 bp AATTTCATGCTTAGATTCAGGATGACATATGTACATCACAGTACTTaGTCTGGGCCGGTTCTGTTTCAAACTACAAGGTGTACCATTTCC +
Preference number: 5 (lower is better)
Translates to: NFMLRFRMTYVHHST*SGPVLFQTTRCTIS
Trigger: GGAAATGGTACACCTTGTAGTTTGAAACAGAACCGGCCCAGATCAAGTACTGTGATGTACATATGTCATCCTGAATCTAAGCATGAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS TCA 90 bp GTTGTAACTTCAGCTACTGAAAGAATTTCATGCTTAGATTCAGGATaGCATATGTACATCACAGTACTTGATCTGGGCCGGTTCTGTTTC +
Preference number: 5 (lower is better)
Translates to: VVTSATERISCLDSG*HMYITVLDLGRFCF
Trigger: GAAACAGAACCGGCCCAGATCAAGTACTGTGATGTACATATGTCATCCTGAATCTAAGCATGAAATTCTTTCAGTAGCTGAAGTTACAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS-3UTR CAA 90 bp AGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACAGAAATTATCGGTGAATCTGATTCTTaGCACTTTAGTTTTACAGTC +
Preference number: 5 (lower is better)
Translates to: RGPMAENSIMRHSGTEIIGESDS*HFSFTV
Trigger: GACTGTAAAACTAAAGTGCAAAGAATCAGATTCACC...GATAATTTCTGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185150.9
ENST00000378239.5
CDS-3UTR CAA 90 bp TTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACAGAATGGACTCTAACTTGCTaGGATGAGATTTATTTTGGA +
Preference number: 5 (lower is better)
Translates to: FRRGPMAENSIMRHSGTEWTLTC*DEIYFG
Trigger: TCCAAAATAAATCTCATCCAAGCAAGTTAGAGTCCA...TTCTGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185150.9
ENST00000378239.5
CDS-3UTR CAA 90 bp TTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTGGGACAGAAACTTGCAGAGAGCAGTaGCTATATAAAAATCTGTTG +
Preference number: 5 (lower is better)
Translates to: FRRGPMAENSIMRHSGTETCREQ*LYKNLL
Trigger: CAACAGATTTTTATATAGCAACTGCTCTCTGCAAGT...TTCTGTCCCACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000185150.9
ENST00000378239.5
CDS-3UTR CAA 90 bp ATACCATCCTTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTTGGATGAGATTTATTTaGGAATCACAGTATCCAAGC +
Preference number: 5 (lower is better)
Translates to: IPSFRRGPMAENSIMRHSWMRFI*ESQYPS
Trigger: GCTTGGATACTGTGATTCCAAAATAAATCTCATCCA...ACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAAGGATGGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185150.9
ENST00000378239.5
CDS-3UTR CAA 90 bp GTTAGAGTAAACCATTCTGAGTCTCAGAAGCATCACCAACTGTCTACATCAGATTGGATGAGATTTATTTaGGAATCACAGTATCCAAGC +
Preference number: 5 (lower is better)
Translates to: VRVNHSESQKHHQLSTSDWMRFI*ESQYPS
Trigger: GCTTGGATACTGTGATTCCAAAATAAATCTCATCCA...ATCTGATGTAGACAGTTGGTGATGCTTCTGAGACTCAGAATGGTTTACTCTAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185150.9
ENST00000378239.5
CDS-3UTR CAA 90 bp ATACCATCCTTTAGAAGAGGTCCAATGGCTGAGAACTCTATAATGAGACACAGTACTTGCAGAGAGCAGTaGCTATATAAAAATCTGTTG +
Preference number: 5 (lower is better)
Translates to: IPSFRRGPMAENSIMRHSTCREQ*LYKNLL
Trigger: CAACAGATTTTTATATAGCAACTGCTCTCTGCAAGT...ACTGTGTCTCATTATAGAGTTCTCAGCCATTGGACCTCTTCTAAAGGATGGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000185150.9
ENST00000378239.5
CDS CAA 90 bp CTCGGTGCCGGGCCAGTTGACTCGGAAAGGGATGTCATCGCTGAGTaGAGGAAGGGCTCGGCCGCCGCCGGACGCCTCCAGGAGGCCGCA +
Preference number: 6 (lower is better)
Translates to: LGAGPVDSERDVIAE*RKGSAAAGRLQEAA
Trigger: TGCGGCCTCCTGGAGGCGTCCGGCGGCGGCCGAGCCCTTCCTCAACTCAGCGATGACATCCCTTTCCGAGTCAACTGGCCCGGCACCGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
ENST00000494373.1
CDS CCA 72 bp CCTCTGCTCCAGGAGGAGAGGAGGAGGAGGAGGAGGTaGAGGAGGAGGCGGCGGGACTATAAAGCGCCCGGG +
Preference number: 6 (lower is better)
Translates to: PLLQEERRRRRR*RRRRRDYKAPG
Trigger: CCCGGGCGCTTTATAGTCCCGCCGCCTCCTCCTCCACCTCCTCCTCCTCCTCCTCTCCTCCTGGAGCAGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
ENST00000494373.1
CDS CAA 72 bp GGGCCAGTTGACTCGGAAAGGGATGTCATCGCTGAGTaGAGGAAGGGCTCGGCCGCCGCCGGACGCCTCCAG +
Preference number: 6 (lower is better)
Translates to: GPVDSERDVIAE*RKGSAAAGRLQ
Trigger: CTGGAGGCGTCCGGCGGCGGCCGAGCCCTTCCTCAACTCAGCGATGACATCCCTTTCCGAGTCAACTGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
ENST00000494373.1
CDS TCA 72 bp TTGGATATGTGGGTTGTCCCAACAGTGAGCACTGGCTaGGAGCCAATAGCAATCGACTTGTGGATCGCTGGA +
Preference number: 6 (lower is better)
Translates to: LDMWVVPTVSTG*EPIAIDLWIAG
Trigger: TCCAGCGATCCACAAGTCGATTGCTATTGGCTCTCAGCCAGTGCTCACTGTTGGGACAACCCACATATCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185150.9
ENST00000405123.7
CDS TCA 72 bp CCTCAGGGTGAGGGGCTTAAATGGAGATCCTGGCAGTaGTTGACAAAATATGTCATTCACAGGAGATGCTCT +
Preference number: 6 (lower is better)
Translates to: PQGEGLKWRSWQ*LTKYVIHRRCS
Trigger: AGAGCATCTCCTGTGAATGACATATTTTGTCAATCACTGCCAGGATCTCCATTTAAGCCCCTCACCCTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS TCA 72 bp CTTAGATTCAGGATGACATATGTACATCACAGTACTTaGTCTGGGCCGGTTCTGTTTCAAACTACAAGGTGT +
Preference number: 6 (lower is better)
Translates to: LRFRMTYVHHST*SGPVLFQTTRC
Trigger: ACACCTTGTAGTTTGAAACAGAACCGGCCCAGATCAAGTACTGTGATGTACATATGTCATCCTGAATCTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7
CDS CCA 72 bp ATTCAGGATGACATATGTACATCACAGTACTTGATCTaGGCCGGTTCTGTTTCAAACTACAAGGTGTACCAT +
Preference number: 6 (lower is better)
Translates to: IQDDICTSQYLI*AGSVSNYKVYH
Trigger: ATGGTACACCTTGTAGTTTGAAACAGAACCGGCCCAGATCAAGTACTGTGATGTACATATGTCATCCTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000185150.9
ENST00000378239.5
ENST00000405123.7