Pregenerated sensors for ERICH6B (Homo sapiens)
Ensembl gene IDs: ENSG00000165837Ensembl transcript IDs: ENST00000298738.3, ENST00000378977.2, ENST00000482992.1, ENST00000504261.5
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | TTTTTCCCTGGAGCTCCCAAGGTCTCCAACTTCCTAAGGCATTTGGTGGATGCCCCAGGCTCCCGCGCGTaGATCCACCGCGATCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: FFPGAPKVSNFLRHLVDAPGSRA*IHRDLR Trigger: CCTGAGATCGCGGTGGATGCACGCGCGGGAGCCTGG...GGCATCCACCAAATGCCTTAGGAAGTTGGAGACCTTGGGAGCTCCAGGGAAAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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| CDS-3UTR TCA 90 bp | AGCTCCCAAGGTCTCCAACTTCCTAAGGCATTTGGTGGATGCCAGATAAGCCCCAAGAAGGTGGTCACCTaGGAGGGGCCAGCGTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: SSQGLQLPKAFGGCQISPKKVVT*EGPASG Trigger: TCCAGACGCTGGCCCCTCTCAGGTGACCACCTTCTT...GGGGCTTATCTGGCATCCACCAAATGCCTTAGGAAGTTGGAGACCTTGGGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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| CDS-3UTR CCA 90 bp | AGCTCCCAAGGTCTCCAACTTCCTAAGGCATTTGGTGGATGCCAGATAAGCCCCAGAGGGGCCAGCGTCTaGACTCCTTGCATCACGAAG | + |
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Preference number: 4 (lower is better) Translates to: SSQGLQLPKAFGGCQISPRGASV*TPCITK Trigger: CTTCGTGATGCAAGGAGTCCAGACGCTGGCCCCTCT...GGGGCTTATCTGGCATCCACCAAATGCCTTAGGAAGTTGGAGACCTTGGGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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| CDS-3UTR CCA 90 bp | TTTTTCCCTGGAGCTCCCAAGGTCTCCAACTTCCTAAGGCATTTGGTGGATGCCGATCTTCTGGGCTGTTaGGCCGGGTTCTGCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: FFPGAPKVSNFLRHLVDADLLGC*AGFCLQ Trigger: CTGGAGGCAGAACCCGGCCCAACAGCCCAGAAGATC...GGCATCCACCAAATGCCTTAGGAAGTTGGAGACCTTGGGAGCTCCAGGGAAAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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| CDS-3UTR CCA 90 bp | TTTTTCCCTGGAGCTCCCAAGGTCTCCAACTTCCTAAGGCATTTGGTGGATGCCTTCAAGGAGATGGGCTaGACAGGGGGTGCGTGGACA | + |
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Preference number: 4 (lower is better) Translates to: FFPGAPKVSNFLRHLVDAFKEMG*TGGAWT Trigger: TGTCCACGCACCCCCTGTCCAGCCCATCTCCTTGAA...GGCATCCACCAAATGCCTTAGGAAGTTGGAGACCTTGGGAGCTCCAGGGAAAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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| CDS-3UTR CCA 90 bp | AGCTCCCAAGGTCTCCAACTTCCTAAGGCATTTGGTGGATGCCAGATAAGCCCCCAGTTCCAGGCCTTCTaGCGTTTGTCTTTGGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: SSQGLQLPKAFGGCQISPQFQAF*RLSLGK Trigger: CTTCCCCAAAGACAAACGCCAGAAGGCCTGGAACTG...GGGGCTTATCTGGCATCCACCAAATGCCTTAGGAAGTTGGAGACCTTGGGAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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| CDS-3UTR CCA 90 bp | AGCTCCCAAGGTCTCCAACTTCCTAAGGCATTTGGTGGATGCCAGATAAGCCCCTGGACAGGGGGTGCGTaGACATGGATGTTCAGATTC | + |
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Preference number: 4 (lower is better) Translates to: SSQGLQLPKAFGGCQISPWTGGA*TWMFRF Trigger: GAATCTGAACATCCATGTCCACGCACCCCCTGTCCA...GGGGCTTATCTGGCATCCACCAAATGCCTTAGGAAGTTGGAGACCTTGGGAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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| CDS-3UTR CCA 90 bp | AGCTCCCAAGGTCTCCAACTTCCTAAGGCATTTGGTGGATGCCAGATAAGCCCCTTTCCAGATCAGGGGTaGTCGCGTAATTCAGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: SSQGLQLPKAFGGCQISPFPDQG*SRNSGA Trigger: GGCTCCTGAATTACGCGACCACCCCTGATCTGGAAA...GGGGCTTATCTGGCATCCACCAAATGCCTTAGGAAGTTGGAGACCTTGGGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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| CDS-3UTR TCA 90 bp | AGCTCCCAAGGTCTCCAACTTCCTAAGGCATTTGGTGGATGCCAGATAAGCCCCTGTCAGGGGGTAAACTaGGTCCAAGCCAAGAGAGTT | + |
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Preference number: 4 (lower is better) Translates to: SSQGLQLPKAFGGCQISPCQGVN*VQAKRV Trigger: AACTCTCTTGGCTTGGACTCAGTTTACCCCCTGACA...GGGGCTTATCTGGCATCCACCAAATGCCTTAGGAAGTTGGAGACCTTGGGAGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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| CDS-3UTR GCA 90 bp | TTTTTCCCTGGAGCTCCCAAGGTCTCCAACTTCCTAAGGCATTTGGTGGATGCCGTGGTGAACTCCTTCTaGAGCAGCCAACGTCACTTT | + |
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Preference number: 4 (lower is better) Translates to: FFPGAPKVSNFLRHLVDAVVNSF*SSQRHF Trigger: AAAGTGACGTTGGCTGCTGCAGAAGGAGTTCACCAC...GGCATCCACCAAATGCCTTAGGAAGTTGGAGACCTTGGGAGCTCCAGGGAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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| CDS-3UTR CCA 90 bp | TTTTTCCCTGGAGCTCCCAAGGTCTCCAACTTCCTAAGGCATTTGGTGGATGCCTCTGGCGTTTGTCTTTaGGGAAGTAGTAGCCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: FFPGAPKVSNFLRHLVDASGVCL*GSSSPG Trigger: ACCTGGGCTACTACTTCCCCAAAGACAAACGCCAGA...GGCATCCACCAAATGCCTTAGGAAGTTGGAGACCTTGGGAGCTCCAGGGAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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| CDS-3UTR TCA 90 bp | AGCTCCCAAGGTCTCCAACTTCCTAAGGCATTTGGTGGATGCCAGATAAGCCCCCCTGGATGTACTCATTaGTTTTCAAGGAGATGGGCT | + |
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Preference number: 4 (lower is better) Translates to: SSQGLQLPKAFGGCQISPPGCTH*FSRRWA Trigger: AGCCCATCTCCTTGAAAATCAATGAGTACATCCAGG...GGGGCTTATCTGGCATCCACCAAATGCCTTAGGAAGTTGGAGACCTTGGGAGCT 50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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| CDS-3UTR CCA 90 bp | AGCTCCCAAGGTCTCCAACTTCCTAAGGCATTTGGTGGATGCCAGATAAGCCCCCAGAGACTCTCCCTCTaGAGAAAATGGAGATTCATC | + |
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Preference number: 4 (lower is better) Translates to: SSQGLQLPKAFGGCQISPQRLSL*RKWRFI Trigger: GATGAATCTCCATTTTCTCCAGAGGGAGAGTCTCTG...GGGGCTTATCTGGCATCCACCAAATGCCTTAGGAAGTTGGAGACCTTGGGAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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| CDS-3UTR CCA 90 bp | TTTTTCCCTGGAGCTCCCAAGGTCTCCAACTTCCTAAGGCATTTGGTGGATGCCTTCGCTCAGCACCTCTaGGATCACAAACTTGTACCT | + |
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Preference number: 4 (lower is better) Translates to: FFPGAPKVSNFLRHLVDAFAQHL*DHKLVP Trigger: AGGTACAAGTTTGTGATCCCAGAGGTGCTGAGCGAA...GGCATCCACCAAATGCCTTAGGAAGTTGGAGACCTTGGGAGCTCCAGGGAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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| CDS-3UTR CCA 90 bp | AGCTCCCAAGGTCTCCAACTTCCTAAGGCATTTGGTGGATGCCAGATAAGCCCCGTTCTGCCTCCAGGATaGTTTTCTTCTTCATTTCGC | + |
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Preference number: 4 (lower is better) Translates to: SSQGLQLPKAFGGCQISPVLPPG*FSSSFR Trigger: GCGAAATGAAGAAGAAAACCATCCTGGAGGCAGAAC...GGGGCTTATCTGGCATCCACCAAATGCCTTAGGAAGTTGGAGACCTTGGGAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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| CDS-3UTR CCA 90 bp | GTTTACTTCAAATCAAGGAGCCACGACAGGTCCCAAATTACAAACCAACTCTCAAGGACCCGGATCTTCTaGGCTGTTGGGCCGGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: VYFKSRSHDRSQITNQLSRTRIF*AVGPGS Trigger: AGAACCCGGCCCAACAGCCCAGAAGATCCGGGTCCT...TGAGAGTTGGTTTGTAATTTGGGACCTGTCGTGGCTCCTTGATTTGAAGTAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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| CDS-3UTR TCA 90 bp | GTTTACTTCAAATCAAGGAGCCACGACAGGTCCCAAATTACAAACCAACTCTCAGGAAGTCGTAGGTGGTaGACTCCTTCTGCAGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: VYFKSRSHDRSQITNQLSGSRRW*TPSAAA Trigger: GGCTGCTGCAGAAGGAGTTCACCACCTACGACTTCC...TGAGAGTTGGTTTGTAATTTGGGACCTGTCGTGGCTCCTTGATTTGAAGTAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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| CDS-3UTR TCA 90 bp | CCAAAAATGTTTACTTCAAATCAAGGAGCCACGACAGGTCCCAAATTACAAACCGGAGTTGTGGGAGGGTaGGGAGGTGATGCTCCTGAT | + |
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Preference number: 4 (lower is better) Translates to: PKMFTSNQGATTGPKLQTGVVGG*GGDAPD Trigger: ATCAGGAGCATCACCTCCTCACCCTCCCACAACTCC...GGTTTGTAATTTGGGACCTGTCGTGGCTCCTTGATTTGAAGTAAACATTTTTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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| CDS-3UTR TCA 90 bp | TTTTTCCCTGGAGCTCCCAAGGTCTCCAACTTCCTAAGGCATTTGGTGGATGCCGATGCTCCTGATAACTaGTTATTTTCAGCAGACATG | + |
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Preference number: 4 (lower is better) Translates to: FFPGAPKVSNFLRHLVDADAPDN*LFSADM Trigger: CATGTCTGCTGAAAATAATCAGTTATCAGGAGCATC...GGCATCCACCAAATGCCTTAGGAAGTTGGAGACCTTGGGAGCTCCAGGGAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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| CDS-3UTR CCA 90 bp | AAAATGTTTACTTCAAATCAAGGAGCCACGACAGGTCCCAAATTACAAACCAACGGACAGTCAAGAAGGTaGTCACCTGAGAGGGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: KMFTSNQGATTGPKLQTNGQSRR*SPERGQ Trigger: CTGGCCCCTCTCAGGTGACCACCTTCTTGACTGTCC...GTTGGTTTGTAATTTGGGACCTGTCGTGGCTCCTTGATTTGAAGTAAACATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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| CDS-3UTR CCA 90 bp | TTACTTCAAATCAAGGAGCCACGACAGGTCCCAAATTACAAACCAACTCTCATAGGGGGTGCGTGGACATaGATGTTCAGATTCCACCAG | + |
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Preference number: 4 (lower is better) Translates to: LLQIKEPRQVPNYKPTLIGGAWT*MFRFHQ Trigger: CTGGTGGAATCTGAACATCCATGTCCACGCACCCCC...TATGAGAGTTGGTTTGTAATTTGGGACCTGTCGTGGCTCCTTGATTTGAAGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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| CDS-3UTR CCA 90 bp | TTTTTCCCTGGAGCTCCCAAGGTCTCCAACTTCCTAAGGCATTTGGTGGATGCCTCACAAACTTGTACCTaGTGCCCAGGTTTAAACAAA | + |
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Preference number: 4 (lower is better) Translates to: FFPGAPKVSNFLRHLVDASQTCT*CPGLNK Trigger: TTTGTTTAAACCTGGGCACCAGGTACAAGTTTGTGA...GGCATCCACCAAATGCCTTAGGAAGTTGGAGACCTTGGGAGCTCCAGGGAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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| CDS-3UTR TCA 90 bp | TTACTTCAAATCAAGGAGCCACGACAGGTCCCAAATTACAAACCAACTCTCATAGAAGGTAGCATTGCCTaGGTTGTTGATAAGGGCCCG | + |
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Preference number: 4 (lower is better) Translates to: LLQIKEPRQVPNYKPTLIEGSIA*VVDKGP Trigger: CGGGCCCTTATCAACAACTCAGGCAATGCTACCTTC...TATGAGAGTTGGTTTGTAATTTGGGACCTGTCGTGGCTCCTTGATTTGAAGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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| CDS-3UTR GCA 90 bp | GTTTACTTCAAATCAAGGAGCCACGACAGGTCCCAAATTACAAACCAACTCTCAAGCGTCTGGACTCCTTaGATCACGAAGAAGCATGGT | + |
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Preference number: 4 (lower is better) Translates to: VYFKSRSHDRSQITNQLSSVWTP*ITKKHG Trigger: ACCATGCTTCTTCGTGATGCAAGGAGTCCAGACGCT...TGAGAGTTGGTTTGTAATTTGGGACCTGTCGTGGCTCCTTGATTTGAAGTAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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| CDS-3UTR GCA 90 bp | TTACTTCAAATCAAGGAGCCACGACAGGTCCCAAATTACAAACCAACTCTCATATGTTGGGCCGGGTTCTaGCTCCAGGATGGTTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: LLQIKEPRQVPNYKPTLICWAGF*LQDGFL Trigger: AAGAAAACCATCCTGGAGGCAGAACCCGGCCCAACA...TATGAGAGTTGGTTTGTAATTTGGGACCTGTCGTGGCTCCTTGATTTGAAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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| CDS-3UTR GCA 90 bp | GTTTACTTCAAATCAAGGAGCCACGACAGGTCCCAAATTACAAACCAACTCTCAAAGGCATTTGGTGGATaGCAGATAAGCCCCGCCTTA | + |
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Preference number: 4 (lower is better) Translates to: VYFKSRSHDRSQITNQLSKAFGG*QISPAL Trigger: TAAGGCGGGGCTTATCTGGCATCCACCAAATGCCTT...TGAGAGTTGGTTTGTAATTTGGGACCTGTCGTGGCTCCTTGATTTGAAGTAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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| CDS-3UTR CCA 90 bp | AAAATGTTTACTTCAAATCAAGGAGCCACGACAGGTCCCAAATTACAAACCAACACCAGTCTGTCTGACTaGCCTGGCTCCTCCTGTACA | + |
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Preference number: 4 (lower is better) Translates to: KMFTSNQGATTGPKLQTNTSLSD*PGSSCT Trigger: TGTACAGGAGGAGCCAGGCCAGTCAGACAGACTGGT...GTTGGTTTGTAATTTGGGACCTGTCGTGGCTCCTTGATTTGAAGTAAACATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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| CDS-3UTR TCA 90 bp | CCAAAAATGTTTACTTCAAATCAAGGAGCCACGACAGGTCCCAAATTACAAACCCATAGCCAGGTTTCCTaGTGGATAATGTATCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: PKMFTSNQGATTGPKLQTHSQVS*WIMYLA Trigger: GGCCAGATACATTATCCATCAGGAAACCTGGCTATG...GGTTTGTAATTTGGGACCTGTCGTGGCTCCTTGATTTGAAGTAAACATTTTTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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| CDS-3UTR GCA 90 bp | CCAAAAATGTTTACTTCAAATCAAGGAGCCACGACAGGTCCCAAATTACAAACCTATTTTCAGCAGACATaGTGGGGAAGTCGTAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: PKMFTSNQGATTGPKLQTYFQQT*WGSRRW Trigger: CCACCTACGACTTCCCCAGCATGTCTGCTGAAAATA...GGTTTGTAATTTGGGACCTGTCGTGGCTCCTTGATTTGAAGTAAACATTTTTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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| CDS-3UTR CCA 90 bp | TTACTTCAAATCAAGGAGCCACGACAGGTCCCAAATTACAAACCAACTCTCATAACTCAGAAGACTCTGTaGCAGATTCAGAGACAGGAG | + |
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Preference number: 4 (lower is better) Translates to: LLQIKEPRQVPNYKPTLITQKTL*QIQRQE Trigger: CTCCTGTCTCTGAATCTGCCACAGAGTCTTCTGAGT...TATGAGAGTTGGTTTGTAATTTGGGACCTGTCGTGGCTCCTTGATTTGAAGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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| CDS-3UTR CCA 90 bp | AAAATGTTTACTTCAAATCAAGGAGCCACGACAGGTCCCAAATTACAAACCAACAGTAGTAGCCCAGGTTaGAGCTCAGGTTCAACCAGA | + |
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Preference number: 4 (lower is better) Translates to: KMFTSNQGATTGPKLQTNSSSPG*SSGSTR Trigger: TCTGGTTGAACCTGAGCTCCAACCTGGGCTACTACT...GTTGGTTTGTAATTTGGGACCTGTCGTGGCTCCTTGATTTGAAGTAAACATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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| CDS-3UTR TCA 90 bp | CCAAAAATGTTTACTTCAAATCAAGGAGCCACGACAGGTCCCAAATTACAAACCAGTATCCTCTTTCTCTaGAGGCAAGTTCTGTGTGGA | + |
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Preference number: 4 (lower is better) Translates to: PKMFTSNQGATTGPKLQTSILFL*RQVLCG Trigger: TCCACACAGAACTTGCCTTCAGAGAAAGAGGATACT...GGTTTGTAATTTGGGACCTGTCGTGGCTCCTTGATTTGAAGTAAACATTTTTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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| CDS-3UTR TCA 90 bp | TTACTTCAAATCAAGGAGCCACGACAGGTCCCAAATTACAAACCAACTCTCATACTTGTTGTCCATCAGTaGTATACTGACGGCCTCTAT | + |
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Preference number: 4 (lower is better) Translates to: LLQIKEPRQVPNYKPTLILVVHQ*YTDGLY Trigger: ATAGAGGCCGTCAGTATATCACTGATGGACAACAAG...TATGAGAGTTGGTTTGTAATTTGGGACCTGTCGTGGCTCCTTGATTTGAAGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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| CDS-3UTR TCA 90 bp | GTTTACTTCAAATCAAGGAGCCACGACAGGTCCCAAATTACAAACCAACTCTCATCTTCCAGTTCATTGTaGGCAGCCATTTCTTTGATT | + |
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Preference number: 4 (lower is better) Translates to: VYFKSRSHDRSQITNQLSSSSSL*AAISLI Trigger: AATCAAAGAAATGGCTGCTCACAATGAACTGGAAGA...TGAGAGTTGGTTTGTAATTTGGGACCTGTCGTGGCTCCTTGATTTGAAGTAAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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| CDS-3UTR GCA 90 bp | GTTTACTTCAAATCAAGGAGCCACGACAGGTCCCAAATTACAAACCAACTCTCATTCGTGGTGGTTTCTTaGTCTGTTTCTGATTTCGAT | + |
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Preference number: 4 (lower is better) Translates to: VYFKSRSHDRSQITNQLSFVVVS*SVSDFD Trigger: ATCGAAATCAGAAACAGAGCAAGAAACCACCACGAA...TGAGAGTTGGTTTGTAATTTGGGACCTGTCGTGGCTCCTTGATTTGAAGTAAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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| CDS-3UTR GCA 90 bp | CCAAAAATGTTTACTTCAAATCAAGGAGCCACGACAGGTCCCAAATTACAAACCCAAACTTGTACCTGGTaGCCAGGTTTAAACAAATCT | + |
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Preference number: 4 (lower is better) Translates to: PKMFTSNQGATTGPKLQTQTCTW*PGLNKS Trigger: AGATTTGTTTAAACCTGGGCACCAGGTACAAGTTTG...GGTTTGTAATTTGGGACCTGTCGTGGCTCCTTGATTTGAAGTAAACATTTTTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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| CDS-3UTR CCA 90 bp | CCAAAAATGTTTACTTCAAATCAAGGAGCCACGACAGGTCCCAAATTACAAACCCTTCCAGCTTGTCAATaGACTCATCTGTTATACCAT | + |
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Preference number: 4 (lower is better) Translates to: PKMFTSNQGATTGPKLQTLPACQ*THLLYH Trigger: ATGGTATAACAGATGAGTCCATTGACAAGCTGGAAG...GGTTTGTAATTTGGGACCTGTCGTGGCTCCTTGATTTGAAGTAAACATTTTTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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| CDS-3UTR CCA 90 bp | CCAAAAATGTTTACTTCAAATCAAGGAGCCACGACAGGTCCCAAATTACAAACCAAGATGATCTTATCCTaGCTCCTTATTTGTACCTGG | + |
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Preference number: 4 (lower is better) Translates to: PKMFTSNQGATTGPKLQTKMILS*LLICTW Trigger: CCAGGTACAAATAAGGAGCCAGGATAAGATCATCTT...GGTTTGTAATTTGGGACCTGTCGTGGCTCCTTGATTTGAAGTAAACATTTTTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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| CDS-3UTR CCA 90 bp | TTACTTCAAATCAAGGAGCCACGACAGGTCCCAAATTACAAACCAACTCTCATACATCACGAAGAAGCATaGTTTGTGATGAATAACTTG | + |
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Preference number: 4 (lower is better) Translates to: LLQIKEPRQVPNYKPTLIHHEEA*FVMNNL Trigger: CAAGTTATTCATCACAAACCATGCTTCTTCGTGATG...TATGAGAGTTGGTTTGTAATTTGGGACCTGTCGTGGCTCCTTGATTTGAAGTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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| CDS TCA 90 bp | GCCAGCCGGGCTGTGCACCTAAATGTCTGTCTGGGAGGAGCAGGCTaGGAAGTCTTGCAGTCTGCAGGACACCGAGGAATCGTATGTGGG | + |
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Preference number: 5 (lower is better) Translates to: ASRAVHLNVCLGGAG*EVLQSAGHRGIVCG Trigger: CCCACATACGATTCCTCGGTGTCCTGCAGACTGCAAGACTTCTCAGCCTGCTCCTCCCAGACAGACATTTAGGTGCACAGCCCGGCTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504261.5 |
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| CDS TCA 90 bp | GAAGGGGTAGCGAAAGTCAACGGGACAGTCAAGAAGGTGGTCACCTaGGAGGGGCCAGCGTCTGGACTCCTTGCATCACGAAGAAGCATG | + |
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Preference number: 5 (lower is better) Translates to: EGVAKVNGTVKKVVT*EGPASGLLASRRSM Trigger: CATGCTTCTTCGTGATGCAAGGAGTCCAGACGCTGGCCCCTCTCAGGTGACCACCTTCTTGACTGTCCCGTTGACTTTCGCTACCCCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000298738.3 ENST00000378977.2 |
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| CDS GCA 90 bp | TTTCCCCAGAAGGACCCGGATCTTCTGGGCTGTTGGGCCGGGTTCTaGCTCCAGGATGGTTTTCTTCTTCATTTCGCTCAGCACCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: FPQKDPDLLGCWAGF*LQDGFLLHFAQHLW Trigger: CCAGAGGTGCTGAGCGAAATGAAGAAGAAAACCATCCTGGAGGCAGAACCCGGCCCAACAGCCCAGAAGATCCGGGTCCTTCTGGGGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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| CDS GCA 90 bp | CCTAAATGTCTGTCTGGGAGGAGCAGGCTGAGAAGTCTTGCAGTCTaGAGGACACCGAGGAATCGTATGTGGGAACGTCCCCGAGAACCA | + |
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Preference number: 5 (lower is better) Translates to: PKCLSGRSRLRSLAV*RTPRNRMWERPREP Trigger: TGGTTCTCGGGGACGTTCCCACATACGATTCCTCGGTGTCCTGCAGACTGCAAGACTTCTCAGCCTGCTCCTCCCAGACAGACATTTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504261.5 |
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| CDS CCA 90 bp | GGACCCGGATCTTCTGGGCTGTTGGGCCGGGTTCTGCCTCCAGGATaGTTTTCTTCTTCATTTCGCTCAGCACCTCTGGGATCACAAACT | + |
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Preference number: 5 (lower is better) Translates to: GPGSSGLLGRVLPPG*FSSSFRSAPLGSQT Trigger: AGTTTGTGATCCCAGAGGTGCTGAGCGAAATGAAGAAGAAAACCATCCTGGAGGCAGAACCCGGCCCAACAGCCCAGAAGATCCGGGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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| CDS-3UTR CAA 90 bp | AGCTCCCAAGGTCTCCAACTTCCTAAGGCATTTGGTGGATGCCAGATAAGCCCCGCATTGCCTGAGTTGTaGATAAGGGCCCGGATCCTC | + |
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Preference number: 5 (lower is better) Translates to: SSQGLQLPKAFGGCQISPALPEL*IRARIL Trigger: GAGGATCCGGGCCCTTATCAACAACTCAGGCAATGC...GGGGCTTATCTGGCATCCACCAAATGCCTTAGGAAGTTGGAGACCTTGGGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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| CDS GCA 90 bp | CTGGATGTACTCATTGATTTTCAAGGAGATGGGCTGGACAGGGGGTaGGTGGACATGGATGTTCAGATTCCACCAGTTCCAGGCCTTCTG | + |
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Preference number: 5 (lower is better) Translates to: LDVLIDFQGDGLDRG*VDMDVQIPPVPGLL Trigger: CAGAAGGCCTGGAACTGGTGGAATCTGAACATCCATGTCCACGCACCCCCTGTCCAGCCCATCTCCTTGAAAATCAATGAGTACATCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000298738.3 ENST00000482992.1 |
||
| CDS CCA 90 bp | TCATTGATTTTCAAGGAGATGGGCTGGACAGGGGGTGCGTGGACATaGATGTTCAGATTCCACCAGTTCCAGGCCTTCTGGCGTTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SLIFKEMGWTGGAWT*MFRFHQFQAFWRLS Trigger: AGACAAACGCCAGAAGGCCTGGAACTGGTGGAATCTGAACATCCATGTCCACGCACCCCCTGTCCAGCCCATCTCCTTGAAAATCAATGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000298738.3 ENST00000482992.1 |
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| CDS CCA 90 bp | ATGTACTCATTGATTTTCAAGGAGATGGGCTGGACAGGGGGTGCGTaGACATGGATGTTCAGATTCCACCAGTTCCAGGCCTTCTGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: MYSLIFKEMGWTGGA*TWMFRFHQFQAFWR Trigger: ACGCCAGAAGGCCTGGAACTGGTGGAATCTGAACATCCATGTCCACGCACCCCCTGTCCAGCCCATCTCCTTGAAAATCAATGAGTACAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000298738.3 ENST00000482992.1 |
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| CDS CCA 90 bp | TGGGATGCAGACAGGAGAGCCAGCACGTGGTGGAAAATGGTGGAGTaGTGCCTACCTTCACGTCTCCTCTTAATCCGTAAGATTGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: WDADRRASTWWKMVE*CLPSRLLLIRKIVS Trigger: GGAAACAATCTTACGGATTAAGAGGAGACGTGAAGGTAGGCACCACTCCACCATTTTCCACCACGTGCTGGCTCTCCTGTCTGCATCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378977.2 |
||
| CDS-3UTR CAA 90 bp | TTTTTCCCTGGAGCTCCCAAGGTCTCCAACTTCCTAAGGCATTTGGTGGATGCCGTAGCATTGCCTGAGTaGTTGATAAGGGCCCGGATC | + |
|
Preference number: 5 (lower is better) Translates to: FFPGAPKVSNFLRHLVDAVALPE*LIRARI Trigger: GATCCGGGCCCTTATCAACAACTCAGGCAATGCTAC...GGCATCCACCAAATGCCTTAGGAAGTTGGAGACCTTGGGAGCTCCAGGGAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000298738.3 |
||
| CDS GCA 90 bp | CCCTGGAGCTCCCAAGGTCTCCAACTTCCTAAGGCATTTGGTGGATaGCAGATAAGCCCCGCCTTAAAACCAGAGTTTAGAGAGCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: PWSSQGLQLPKAFGG*QISPALKPEFREHL Trigger: AAGATGCTCTCTAAACTCTGGTTTTAAGGCGGGGCTTATCTGGCATCCACCAAATGCCTTAGGAAGTTGGAGACCTTGGGAGCTCCAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298738.3 |
||
| CDS GCA 90 bp | GATGCAGACAGGAGAGCCAGCACGTGGTGGAAAATGGTGGAGTGGTaGCTACCTTCACGTCTCCTCTTAATCCGTAAGATTGTTTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: DADRRASTWWKMVEW*LPSRLLLIRKIVSL Trigger: CAAGGAAACAATCTTACGGATTAAGAGGAGACGTGAAGGTAGGCACCACTCCACCATTTTCCACCACGTGCTGGCTCTCCTGTCTGCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378977.2 |
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| CDS CCA 90 bp | GGATGTTCAGATTCCACCAGTTCCAGGCCTTCTGGCGTTTGTCTTTaGGGAAGTAGTAGCCCAGGTTGGAGCTCAGGTTCAACCAGATAT | + |
|
Preference number: 5 (lower is better) Translates to: GCSDSTSSRPSGVCL*GSSSPGWSSGSTRY Trigger: ATATCTGGTTGAACCTGAGCTCCAACCTGGGCTACTACTTCCCCAAAGACAAACGCCAGAAGGCCTGGAACTGGTGGAATCTGAACATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000298738.3 ENST00000482992.1 |
||
| CDS-3UTR CAA 90 bp | GTTTACTTCAAATCAAGGAGCCACGACAGGTCCCAAATTACAAACCAACTCTCAGGATCTTCTGGGCTGTaGGGCCGGGTTCTGCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VYFKSRSHDRSQITNQLSGSSGL*GRVLPP Trigger: TGGAGGCAGAACCCGGCCCAACAGCCCAGAAGATCC...TGAGAGTTGGTTTGTAATTTGGGACCTGTCGTGGCTCCTTGATTTGAAGTAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298738.3 |
||
| CDS CCA 90 bp | TTAAAGATTTTACGGCAGTTCTGTCGTAGCACCAGTCTGTCTGACTaGCCTGGCTCCTCCTGTACAATGTCAGAAGCAACTCAGAAGACT | + |
|
Preference number: 5 (lower is better) Translates to: LKILRQFCRSTSLSD*PGSSCTMSEATQKT Trigger: AGTCTTCTGAGTTGCTTCTGACATTGTACAGGAGGAGCCAGGCCAGTCAGACAGACTGGTGCTACGACAGAACTGCCGTAAAATCTTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298738.3 ENST00000378977.2 |
||
| CDS CCA 90 bp | CTTATTTGTACCTGGATGTACTCATTGATTTTCAAGGAGATGGGCTaGACAGGGGGTGCGTGGACATGGATGTTCAGATTCCACCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LICTWMYSLIFKEMG*TGGAWTWMFRFHQF Trigger: GAACTGGTGGAATCTGAACATCCATGTCCACGCACCCCCTGTCCAGCCCATCTCCTTGAAAATCAATGAGTACATCCAGGTACAAATAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000298738.3 ENST00000482992.1 |
||
| CDS-3UTR CAA 90 bp | TTACTTCAAATCAAGGAGCCACGACAGGTCCCAAATTACAAACCAACTCTCATACAGCGTCTGGACTCCTaGCATCACGAAGAAGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: LLQIKEPRQVPNYKPTLIQRLDS*HHEEAW Trigger: CCATGCTTCTTCGTGATGCAAGGAGTCCAGACGCTG...TATGAGAGTTGGTTTGTAATTTGGGACCTGTCGTGGCTCCTTGATTTGAAGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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| CDS-3UTR CAA 90 bp | AGCTCCCAAGGTCTCCAACTTCCTAAGGCATTTGGTGGATGCCAGATAAGCCCCATCAGGAAAGAGAATTaGATAGACATTCTTGTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SSQGLQLPKAFGGCQISPIRKEN*IDILVG Trigger: CCCAACAAGAATGTCTATCAAATTCTCTTTCCTGAT...GGGGCTTATCTGGCATCCACCAAATGCCTTAGGAAGTTGGAGACCTTGGGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298738.3 |
||
| CDS GCA 90 bp | CGTAGACATTTTAGGTGCCAATATATGTCAATACGAGCATCCCTGTaGTTCTGTGGATACTGTATCTGGCCTGTCCCATCAGGAAAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: RRHFRCQYMSIRASL*FCGYCIWPVPSGKR Trigger: TCTCTTTCCTGATGGGACAGGCCAGATACAGTATCCACAGAAGCACAGGGATGCTCGTATTGACATATATTGGCACCTAAAATGTCTACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000482992.1 ENST00000504261.5 |
||
| CDS-3UTR CAA 90 bp | GTTTACTTCAAATCAAGGAGCCACGACAGGTCCCAAATTACAAACCAACTCTCATCTGGGATCACAAACTaGTACCTGGTGCCCAGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: VYFKSRSHDRSQITNQLSSGITN*YLVPRF Trigger: AAACCTGGGCACCAGGTACAAGTTTGTGATCCCAGA...TGAGAGTTGGTTTGTAATTTGGGACCTGTCGTGGCTCCTTGATTTGAAGTAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298738.3 |
||
| CDS-3UTR CAA 90 bp | TTTTTCCCTGGAGCTCCCAAGGTCTCCAACTTCCTAAGGCATTTGGTGGATGCCATCTTCTTCAGGTACTaGTTGTCCATCAGTGATATA | + |
|
Preference number: 5 (lower is better) Translates to: FFPGAPKVSNFLRHLVDAIFFRY*LSISDI Trigger: TATATCACTGATGGACAACAAGTACCTGAAGAAGAT...GGCATCCACCAAATGCCTTAGGAAGTTGGAGACCTTGGGAGCTCCAGGGAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000298738.3 |
||
| CDS-3UTR CAA 90 bp | AAAATGTTTACTTCAAATCAAGGAGCCACGACAGGTCCCAAATTACAAACCAACGTTCTGTGTGGAATATaGGGGAGTTGTGGGAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: KMFTSNQGATTGPKLQTNVLCGI*GSCGRV Trigger: CACCCTCCCACAACTCCCCAATATTCCACACAGAAC...GTTGGTTTGTAATTTGGGACCTGTCGTGGCTCCTTGATTTGAAGTAAACATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298738.3 |
||
| CDS TCA 90 bp | CTGTCTCAGGCTTCTCAGGTGTTGGTTTGCTCATTAAATGAAATGTaGAACTGGTCATCTCTGTTAACTTTTGAGCTTCACGTCTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LSQASQVLVCSLNEM*NWSSLLTFELHVSS Trigger: AGAGGAGACGTGAAGCTCAAAAGTTAACAGAGATGACCAGTTTCACATTTCATTTAATGAGCAAACCAACACCTGAGAAGCCTGAGACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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| CDS GCA 90 bp | TTAGTGTTAACATGCTCTTCCGGAGCCAGCTTCGTGGTGGTTTCTTaGTCTGTTTCTGATTTCGATTTTAAAGATTTTACGGCAGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LVLTCSSGASFVVVS*SVSDFDFKDFTAVL Trigger: CAGAACTGCCGTAAAATCTTTAAAATCGAAATCAGAAACAGAGCAAGAAACCACCACGAAGCTGGCTCCGGAAGAGCATGTTAACACTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000298738.3 ENST00000378977.2 |
||
| CDS-3UTR CAA 90 bp | CCAAAAATGTTTACTTCAAATCAAGGAGCCACGACAGGTCCCAAATTACAAACCTCTTCCACTTCCAGCTaGTCAATGGACTCATCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: PKMFTSNQGATTGPKLQTSSTSS*SMDSSV Trigger: AACAGATGAGTCCATTGACAAGCTGGAAGTGGAAGA...GGTTTGTAATTTGGGACCTGTCGTGGCTCCTTGATTTGAAGTAAACATTTTTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000298738.3 |
||
| CDS-3UTR CAA 90 bp | CCAAAAATGTTTACTTCAAATCAAGGAGCCACGACAGGTCCCAAATTACAAACCACCTGGATGTACTCATaGATTTTCAAGGAGATGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PKMFTSNQGATTGPKLQTTWMYS*IFKEMG Trigger: GCCCATCTCCTTGAAAATCAATGAGTACATCCAGGT...GGTTTGTAATTTGGGACCTGTCGTGGCTCCTTGATTTGAAGTAAACATTTTTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298738.3 |
||
| CDS-3UTR CAA 90 bp | GTTTACTTCAAATCAAGGAGCCACGACAGGTCCCAAATTACAAACCAACTCTCAATCCTGGCTCCTTATTaGTACCTGGATGTACTCATT | + |
|
Preference number: 5 (lower is better) Translates to: VYFKSRSHDRSQITNQLSILAPY*YLDVLI Trigger: AATGAGTACATCCAGGTACAAATAAGGAGCCAGGAT...TGAGAGTTGGTTTGTAATTTGGGACCTGTCGTGGCTCCTTGATTTGAAGTAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298738.3 |
||
| CDS-3UTR CAA 90 bp | TTACTTCAAATCAAGGAGCCACGACAGGTCCCAAATTACAAACCAACTCTCATACAGGCTTCTCAGGTGTaGGTTTGCTCATTAAATGAA | + |
|
Preference number: 5 (lower is better) Translates to: LLQIKEPRQVPNYKPTLIQASQV*VCSLNE Trigger: TTCATTTAATGAGCAAACCAACACCTGAGAAGCCTG...TATGAGAGTTGGTTTGTAATTTGGGACCTGTCGTGGCTCCTTGATTTGAAGTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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| CDS-3UTR CAA 90 bp | GTTTACTTCAAATCAAGGAGCCACGACAGGTCCCAAATTACAAACCAACTCTCATTCTTCAGGTACTTGTaGTCCATCAGTGATATACTG | + |
|
Preference number: 5 (lower is better) Translates to: VYFKSRSHDRSQITNQLSFFRYL*SISDIL Trigger: CAGTATATCACTGATGGACAACAAGTACCTGAAGAA...TGAGAGTTGGTTTGTAATTTGGGACCTGTCGTGGCTCCTTGATTTGAAGTAAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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| CDS-3UTR CAA 90 bp | AAAATGTTTACTTCAAATCAAGGAGCCACGACAGGTCCCAAATTACAAACCAACTTTGTGATGAATAACTaGCCTTGGGTTCTTTCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: KMFTSNQGATTGPKLQTNFVMNN*PWVLSD Trigger: ATCTGAAAGAACCCAAGGCAAGTTATTCATCACAAA...GTTGGTTTGTAATTTGGGACCTGTCGTGGCTCCTTGATTTGAAGTAAACATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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| CDS CCA 72 bp | AGGCGGTGGGATGCAGACAGGAGAGCCAGCACGTGGTaGAAAATGGTGGAGTGGTGCCTACCTTCACGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: RRWDADRRASTW*KMVEWCLPSRL Trigger: GAGACGTGAAGGTAGGCACCACTCCACCATTTTCCACCACGTGCTGGCTCTCCTGTCTGCATCCCACCGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378977.2 |
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| CDS TCA 72 bp | GCGAAAGTCAACGGGACAGTCAAGAAGGTGGTCACCTaGGAGGGGCCAGCGTCTGGACTCCTTGCATCACGA | + |
|
Preference number: 6 (lower is better) Translates to: AKVNGTVKKVVT*EGPASGLLASR Trigger: TCGTGATGCAAGGAGTCCAGACGCTGGCCCCTCTCAGGTGACCACCTTCTTGACTGTCCCGTTGACTTTCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298738.3 ENST00000378977.2 |
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| CDS CCA 72 bp | AGTCTTGCAGTCTGCAGGACACCGAGGAATCGTATGTaGGAACGTCCCCGAGAACCACACGAGCGTGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SLAVCRTPRNRM*ERPREPHERAA Trigger: AGCAGCACGCTCGTGTGGTTCTCGGGGACGTTCCCACATACGATTCCTCGGTGTCCTGCAGACTGCAAGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504261.5 |
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| CDS CCA 72 bp | TTCAAGGAGATGGGCTGGACAGGGGGTGCGTGGACATaGATGTTCAGATTCCACCAGTTCCAGGCCTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: FKEMGWTGGAWT*MFRFHQFQAFW Trigger: CCAGAAGGCCTGGAACTGGTGGAATCTGAACATCCATGTCCACGCACCCCCTGTCCAGCCCATCTCCTTGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000298738.3 ENST00000482992.1 |
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| CDS CCA 72 bp | AGCCTATTCATTTTCCCCAGAAGGACCCGGATCTTCTaGGCTGTTGGGCCGGGTTCTGCCTCCAGGATGGTT | + |
|
Preference number: 6 (lower is better) Translates to: SLFIFPRRTRIF*AVGPGSASRMV Trigger: AACCATCCTGGAGGCAGAACCCGGCCCAACAGCCCAGAAGATCCGGGTCCTTCTGGGGAAAATGAATAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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| CDS TCA 72 bp | GCTGTGCACCTAAATGTCTGTCTGGGAGGAGCAGGCTaGGAAGTCTTGCAGTCTGCAGGACACCGAGGAATC | + |
|
Preference number: 6 (lower is better) Translates to: AVHLNVCLGGAG*EVLQSAGHRGI Trigger: GATTCCTCGGTGTCCTGCAGACTGCAAGACTTCTCAGCCTGCTCCTCCCAGACAGACATTTAGGTGCACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000504261.5 |
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| CDS CCA 72 bp | GATTCCACCAGTTCCAGGCCTTCTGGCGTTTGTCTTTaGGGAAGTAGTAGCCCAGGTTGGAGCTCAGGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: DSTSSRPSGVCL*GSSSPGWSSGS Trigger: TGAACCTGAGCTCCAACCTGGGCTACTACTTCCCCAAAGACAAACGCCAGAAGGCCTGGAACTGGTGGAATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000298738.3 ENST00000482992.1 |
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| CDS CCA 72 bp | GACAGGAGAGCCAGCACGTGGTGGAAAATGGTGGAGTaGTGCCTACCTTCACGTCTCCTCTTAATCCGTAAG | + |
|
Preference number: 6 (lower is better) Translates to: DRRASTWWKMVE*CLPSRLLLIRK Trigger: CTTACGGATTAAGAGGAGACGTGAAGGTAGGCACCACTCCACCATTTTCCACCACGTGCTGGCTCTCCTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378977.2 |
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| CDS CCA 72 bp | TTACGGCAGTTCTGTCGTAGCACCAGTCTGTCTGACTaGCCTGGCTCCTCCTGTACAATGTCAGAAGCAACT | + |
|
Preference number: 6 (lower is better) Translates to: LRQFCRSTSLSD*PGSSCTMSEAT Trigger: AGTTGCTTCTGACATTGTACAGGAGGAGCCAGGCCAGTCAGACAGACTGGTGCTACGACAGAACTGCCGTAA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000298738.3 ENST00000378977.2 |
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| CDS GCA 72 bp | TCGTATGTGGGAACGTCCCCGAGAACCACACGAGCGTaGTGCTCAGTGCTGACAGATATCACTATTTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: SYVGTSPRTTRA*CSVLTDITIFI Trigger: GATGAAAATAGTGATATCTGTCAGCACTGAGCAGCACGCTCGTGTGGTTCTCGGGGACGTTCCCACATACGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000504261.5 |
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| CDS CCA 72 bp | ACCTGGATGTACTCATTGATTTTCAAGGAGATGGGCTaGACAGGGGGTGCGTGGACATGGATGTTCAGATTC | + |
|
Preference number: 6 (lower is better) Translates to: TWMYSLIFKEMG*TGGAWTWMFRF Trigger: GAATCTGAACATCCATGTCCACGCACCCCCTGTCCAGCCCATCTCCTTGAAAATCAATGAGTACATCCAGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000298738.3 ENST00000482992.1 |
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| CDS CAA 72 bp | TCCTCTTCCAGATCCTCTTCCTCCTCCAGATACTCTTaGTCCTCCAGAGACTCTCCCTCTGGAGAAAATGGA | + |
|
Preference number: 6 (lower is better) Translates to: SSSRSSSSSRYS*SSRDSPSGENG Trigger: TCCATTTTCTCCAGAGGGAGAGTCTCTGGAGGACAAAGAGTATCTGGAGGAGGAAGAGGATCTGGAAGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298738.3 ENST00000378977.2 |
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| CDS GCA 72 bp | TCCCAAGGTCTCCAACTTCCTAAGGCATTTGGTGGATaGCAGATAAGCCCCGCCTTAAAACCAGAGTTTAGA | + |
|
Preference number: 6 (lower is better) Translates to: SQGLQLPKAFGG*QISPALKPEFR Trigger: TCTAAACTCTGGTTTTAAGGCGGGGCTTATCTGGCATCCACCAAATGCCTTAGGAAGTTGGAGACCTTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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| CDS GCA 72 bp | TATGTGGGAACGTCCCCGAGAACCACACGAGCGTGCTaGTCAGTGCTGACAGATATCACTATTTTCATCATA | + |
|
Preference number: 6 (lower is better) Translates to: YVGTSPRTTRAC*SVLTDITIFII Trigger: TATGATGAAAATAGTGATATCTGTCAGCACTGAGCAGCACGCTCGTGTGGTTCTCGGGGACGTTCCCACATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000504261.5 |
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| CDS CCA 72 bp | GGCCAGCGTCTGGACTCCTTGCATCACGAAGAAGCATaGTTTGTGATGAATAACTTGCCTTGGGTTCTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: GQRLDSLHHEEA*FVMNNLPWVLS Trigger: TGAAAGAACCCAAGGCAAGTTATTCATCACAAACCATGCTTCTTCGTGATGCAAGGAGTCCAGACGCTGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000298738.3 ENST00000378977.2 |
||
| CDS CAA 72 bp | TTATCCTGGCTCCTTATTTGTACCTGGATGTACTCATaGATTTTCAAGGAGATGGGCTGGACAGGGGGTGCG | + |
|
Preference number: 6 (lower is better) Translates to: LSWLLICTWMYS*IFKEMGWTGGA Trigger: CGCACCCCCTGTCCAGCCCATCTCCTTGAAAATCAATGAGTACATCCAGGTACAAATAAGGAGCCAGGATAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000298738.3 ENST00000482992.1 |
||
| CDS CAA 90 bp | AGATACTCTTCCTCTTCCAGATCCTCTTCCTCCTCCAGATACTCTTaGTCCTCCAGAGACTCTCCCTCTGGAGAAAATGGAGATTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: RYSSSSRSSSSSRYS*SSRDSPSGENGDSS Trigger: GGATGAATCTCCATTTTCTCCAGAGGGAGAGTCTCTGGAGGACAAAGAGTATCTGGAGGAGGAAGAGGATCTGGAAGAGGAAGAGTATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298738.3 ENST00000378977.2 |
||
| CDS CAA 90 bp | AAGATGATCTTATCCTGGCTCCTTATTTGTACCTGGATGTACTCATaGATTTTCAAGGAGATGGGCTGGACAGGGGGTGCGTGGACATGG | + |
|
Preference number: 6 (lower is better) Translates to: KMILSWLLICTWMYS*IFKEMGWTGGAWTW Trigger: CCATGTCCACGCACCCCCTGTCCAGCCCATCTCCTTGAAAATCAATGAGTACATCCAGGTACAAATAAGGAGCCAGGATAAGATCATCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000298738.3 ENST00000482992.1 |
||
| CDS GCA 72 bp | GGGGTACATACATGCAGGTTTGTTACCTGGCTGTATTaGATGATGCTGAGGTTTTTCAACCCTTGTGGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: GVHTCRFVTWLY*MMLRFFNPCGS Trigger: GGAACCACAAGGGTTGAAAAACCTCAGCATCATGCAATACAGCCAGGTAACAAACCTGCATGTATGTACCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000504261.5 |
||
| CDS GCA 72 bp | TTTAGGTGCCAATATATGTCAATACGAGCATCCCTGTaGTTCTGTGGATACTGTATCTGGCCTGTCCCATCA | + |
|
Preference number: 6 (lower is better) Translates to: FRCQYMSIRASL*FCGYCIWPVPS Trigger: TGATGGGACAGGCCAGATACAGTATCCACAGAAGCACAGGGATGCTCGTATTGACATATATTGGCACCTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000482992.1 ENST00000504261.5 |
||
| CDS CAA 90 bp | TATCCTCTTTCTCTGAAGGCAAGTTCTGTGTGGAATATTGGGGAGTaGTGGGAGGGTGAGGAGGTGATGCTCCTGATAACTGATTATTTT | + |
|
Preference number: 6 (lower is better) Translates to: YPLSLKASSVWNIGE*WEGEEVMLLITDYF Trigger: AAAATAATCAGTTATCAGGAGCATCACCTCCTCACCCTCCCACAACTCCCCAATATTCCACACAGAACTTGCCTTCAGAGAAAGAGGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298738.3 ENST00000378977.2 |
||
| CDS CAA 90 bp | CTGTTCATAGGTGAAGCAGAAGATGATCTTATCCTGGCTCCTTATTaGTACCTGGATGTACTCATTGATTTTCAAGGAGATGGGCTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: LFIGEAEDDLILAPY*YLDVLIDFQGDGLD Trigger: GTCCAGCCCATCTCCTTGAAAATCAATGAGTACATCCAGGTACAAATAAGGAGCCAGGATAAGATCATCTTCTGCTTCACCTATGAACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298738.3 ENST00000482992.1 |
||
| CDS GCA 72 bp | ACATGCTCTTCCGGAGCCAGCTTCGTGGTGGTTTCTTaGTCTGTTTCTGATTTCGATTTTAAAGATTTTACG | + |
|
Preference number: 6 (lower is better) Translates to: TCSSGASFVVVS*SVSDFDFKDFT Trigger: CGTAAAATCTTTAAAATCGAAATCAGAAACAGAGCAAGAAACCACCACGAAGCTGGCTCCGGAAGAGCATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000298738.3 ENST00000378977.2 |
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| CDS CCA 72 bp | CAGAAGATGATCTTATCCTGGCTCCTTATTTGTACCTaGATGTACTCATTGATTTTCAAGGAGATGGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: QKMILSWLLICT*MYSLIFKEMGW Trigger: CCAGCCCATCTCCTTGAAAATCAATGAGTACATCCAGGTACAAATAAGGAGCCAGGATAAGATCATCTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298738.3 ENST00000482992.1 |
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| CDS CAA 72 bp | AACCAGAGTTTAGAGAGCATCTTCTTCAGGTACTTGTaGTCCATCAGTGATATACTGACGGCCTCTATGAAG | + |
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Preference number: 6 (lower is better) Translates to: NQSLESIFFRYL*SISDILTASMK Trigger: CTTCATAGAGGCCGTCAGTATATCACTGATGGACAACAAGTACCTGAAGAAGATGCTCTCTAAACTCTGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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| CDS TCA 72 bp | CCAACGTCACTTTATTATCAATGTCAGGGGGTAAACTaGGTCCAAGCCAAGAGAGTTTTCAACAATAACAGC | + |
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Preference number: 6 (lower is better) Translates to: PTSLYYQCQGVN*VQAKRVFNNNS Trigger: GCTGTTATTGTTGAAAACTCTCTTGGCTTGGACTCAGTTTACCCCCTGACATTGATAATAAAGTGACGTTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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| CDS CAA 72 bp | GGTGAAGCAGAAGATGATCTTATCCTGGCTCCTTATTaGTACCTGGATGTACTCATTGATTTTCAAGGAGAT | + |
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Preference number: 6 (lower is better) Translates to: GEAEDDLILAPY*YLDVLIDFQGD Trigger: ATCTCCTTGAAAATCAATGAGTACATCCAGGTACAAATAAGGAGCCAGGATAAGATCATCTTCTGCTTCACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298738.3 ENST00000482992.1 |
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| CDS TCA 72 bp | GCTTCTCAGGTGTTGGTTTGCTCATTAAATGAAATGTaGAACTGGTCATCTCTGTTAACTTTTGAGCTTCAC | + |
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Preference number: 6 (lower is better) Translates to: ASQVLVCSLNEM*NWSSLLTFELH Trigger: GTGAAGCTCAAAAGTTAACAGAGATGACCAGTTTCACATTTCATTTAATGAGCAAACCAACACCTGAGAAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298738.3 |
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