Pregenerated sensors for ERICH4 (Homo sapiens)
Ensembl gene IDs: ENSG00000204978Ensembl transcript IDs: ENST00000378187.3
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATCCCCATCTCAGCAGCACACCTGAGGCTCATCTGCGAAAGCACCTaGAACTTCTCTACAACCTCCCACATCACCTCCAAACACATCCTC | + |
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Preference number: 1 (lower is better) Translates to: IPISAAHLRLICEST*NFSTTSHITSKHIL Trigger: GAGGATGTGTTTGGAGGTGATGTGGGAGGTTGTAGAGAAGTTGCAGGTGCTTTCGCAGATGAGCCTCAGGTGTGCTGCTGAGATGGGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378187.3 |
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| 3UTR GCA 90 bp | ATATTTGCAGAGATCCCCATCTCAGCAGCACACCTGAGGCTCATCTaGGAAAGCACCTGCAACTTCTCTACAACCTCCCACATCACCTCC | + |
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Preference number: 1 (lower is better) Translates to: IFAEIPISAAHLRLI*ESTCNFSTTSHITS Trigger: GGAGGTGATGTGGGAGGTTGTAGAGAAGTTGCAGGTGCTTTCGCAGATGAGCCTCAGGTGTGCTGCTGAGATGGGGATCTCTGCAAATAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378187.3 |
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| 3UTR TCA 90 bp | ATAACCATGTGTGTCCGGTGGCTACCATACTGGACAGCGTTGATCTaGAATCGCATCTGTATGCATCACCAGCATATTTGCAGAGATCCC | + |
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Preference number: 1 (lower is better) Translates to: ITMCVRWLPYWTALI*NRICMHHQHICRDP Trigger: GGGATCTCTGCAAATATGCTGGTGATGCATACAGATGCGATTTCAGATCAACGCTGTCCAGTATGGTAGCCACCGGACACACATGGTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378187.3 |
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| 3UTR TCA 90 bp | CATTGCAGGCACCTTCAGAGAAAGCACTTACTAAAGGGGTATACTTaGTTCCACATCTGCTTTGACCTGCAAATCTCCCTTCTCCTTTAC | + |
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Preference number: 1 (lower is better) Translates to: HCRHLQRKHLLKGYT*FHICFDLQISLLLY Trigger: GTAAAGGAGAAGGGAGATTTGCAGGTCAAAGCAGATGTGGAATCAAGTATACCCCTTTAGTAAGTGCTTTCTCTGAAGGTGCCTGCAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378187.3 |
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| 3UTR-3UTR TCA 90 bp | GCACTAAATAACCATGTGTGTCCGGTGGCTACCATACTGGACAGCGTTGATCTGTCTCAGCAGCACACCTaGGGCTCATCTGCGAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: ALNNHVCPVATILDSVDLSQQHT*GSSAKA Trigger: TGCTTTCGCAGATGAGCCTCAGGTGTGCTGCTGAGA...CAGATCAACGCTGTCCAGTATGGTAGCCACCGGACACACATGGTTATTTAGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378187.3 |
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| 3UTR-3UTR GCA 90 bp | GAGGCTCATCTGCGAAAGCACCTGCAACTTCTCTACAACCTCCCACATCACCTCATGCCTAAATATCATTaGAGGCACCTTCAGAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: EAHLRKHLQLLYNLPHHLMPKYH*RHLQRK Trigger: CTTTCTCTGAAGGTGCCTGCAATGATATTTAGGCAT...GAGGTGATGTGGGAGGTTGTAGAGAAGTTGCAGGTGCTTTCGCAGATGAGCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378187.3 |
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| 3UTR-3UTR TCA 90 bp | TCATCTGCAAACACACCCATAGCTCACAGGCCAATGCCTAAATATCATTGCAGGATTCCACATCTGCTTTaGCCTGCAAATCTCCCTTCT | + |
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Preference number: 2 (lower is better) Translates to: SSANTPIAHRPMPKYHCRIPHLL*PANLPS Trigger: AGAAGGGAGATTTGCAGGTCAAAGCAGATGTGGAAT...CCTGCAATGATATTTAGGCATTGGCCTGTGAGCTATGGGTGTGTTTGCAGATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378187.3 |
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| 3UTR-3UTR TCA 90 bp | GCTACCATACTGGACAGCGTTGATCTGAAATCGCATCTGTATGCATCACCAGCACTAAAGGGGTATACTTaGTTCCACATCTGCTTTGAC | + |
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Preference number: 2 (lower is better) Translates to: ATILDSVDLKSHLYASPALKGYT*FHICFD Trigger: GTCAAAGCAGATGTGGAATCAAGTATACCCCTTTAG...TGCTGGTGATGCATACAGATGCGATTTCAGATCAACGCTGTCCAGTATGGTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378187.3 |
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| 3UTR-3UTR GCA 90 bp | AACACACCCATAGCTCACAGGCCAATGCCTAAATATCATTGCAGGCACCTTCAGACATCTGCTTTGACCTaGAAATCTCCCTTCTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: NTPIAHRPMPKYHCRHLQTSALT*KSPFSF Trigger: AAAGGAGAAGGGAGATTTGCAGGTCAAAGCAGATGT...CTGAAGGTGCCTGCAATGATATTTAGGCATTGGCCTGTGAGCTATGGGTGTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378187.3 |
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| 3UTR GCA 72 bp | GAGATCCCCATCTCAGCAGCACACCTGAGGCTCATCTaGGAAAGCACCTGCAACTTCTCTACAACCTCCCAC | + |
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Preference number: 3 (lower is better) Translates to: EIPISAAHLRLI*ESTCNFSTTSH Trigger: GTGGGAGGTTGTAGAGAAGTTGCAGGTGCTTTCGCAGATGAGCCTCAGGTGTGCTGCTGAGATGGGGATCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378187.3 |
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| 3UTR TCA 72 bp | CCATGTGTGTCCGGTGGCTACCATACTGGACAGCGTTaGTCTGAAATCGCATCTGTATGCATCACCAGCATA | + |
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Preference number: 3 (lower is better) Translates to: PCVSGGYHTGQR*SEIASVCITSI Trigger: TATGCTGGTGATGCATACAGATGCGATTTCAGATCAACGCTGTCCAGTATGGTAGCCACCGGACACACATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378187.3 |
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| 3UTR TCA 72 bp | TGTGTCCGGTGGCTACCATACTGGACAGCGTTGATCTaGAATCGCATCTGTATGCATCACCAGCATATTTGC | + |
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Preference number: 3 (lower is better) Translates to: CVRWLPYWTALI*NRICMHHQHIC Trigger: GCAAATATGCTGGTGATGCATACAGATGCGATTTCAGATCAACGCTGTCCAGTATGGTAGCCACCGGACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378187.3 |
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| 3UTR-3UTR CAA 90 bp | TCATCTGCAAACACACCCATAGCTCACAGGCCAATGCCTAAATATCATTGCAGGGATTCCACATCTGCTTaGACCTGCAAATCTCCCTTC | + |
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Preference number: 3 (lower is better) Translates to: SSANTPIAHRPMPKYHCRDSTSA*TCKSPF Trigger: GAAGGGAGATTTGCAGGTCAAAGCAGATGTGGAATC...CCTGCAATGATATTTAGGCATTGGCCTGTGAGCTATGGGTGTGTTTGCAGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378187.3 |
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| 3UTR GCA 72 bp | ACACCCATAGCTCACAGGCCAATGCCTAAATATCATTaGAGGCACCTTCAGAGAAAGCACTTACTAAAGGGG | + |
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Preference number: 3 (lower is better) Translates to: TPIAHRPMPKYH*RHLQRKHLLKG Trigger: CCCCTTTAGTAAGTGCTTTCTCTGAAGGTGCCTGCAATGATATTTAGGCATTGGCCTGTGAGCTATGGGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378187.3 |
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| CDS-3UTR CCA 90 bp | CACCTGAGGCTCATCTGCGAAAGCACCTGCAACTTCTCTACAACCTCCCACATCAGCTGTCCCAGCAGCTaGACATCCACTCGGCGCAGG | + |
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Preference number: 4 (lower is better) Translates to: HLRLICESTCNFSTTSHISCPSS*TSTRRR Trigger: CCTGCGCCGAGTGGATGTCCAGCTGCTGGGACAGCT...GATGTGGGAGGTTGTAGAGAAGTTGCAGGTGCTTTCGCAGATGAGCCTCAGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378187.3 |
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| CDS-3UTR CCA 90 bp | ACCAGCATATTTGCAGAGATCCCCATCTCAGCAGCACACCTGAGGCTCATCTGCAGGTGGATGTGGGGCTaGGCAGGCCTCCAGGTGTTC | + |
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Preference number: 4 (lower is better) Translates to: TSIFAEIPISAAHLRLICRWMWG*AGLQVF Trigger: GAACACCTGGAGGCCTGCCCAGCCCCACATCCACCT...GCAGATGAGCCTCAGGTGTGCTGCTGAGATGGGGATCTCTGCAAATATGCTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378187.3 |
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| CDS-3UTR TCA 90 bp | GAGGCTCATCTGCGAAAGCACCTGCAACTTCTCTACAACCTCCCACATCACCTCGCAGTCCTGAGGGTCTaGCCAGGGATTTCCACTGGG | + |
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Preference number: 4 (lower is better) Translates to: EAHLRKHLQLLYNLPHHLAVLRV*PGISTG Trigger: CCCAGTGGAAATCCCTGGTCAGACCCTCAGGACTGC...GAGGTGATGTGGGAGGTTGTAGAGAAGTTGCAGGTGCTTTCGCAGATGAGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378187.3 |
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| CDS-3UTR TCA 90 bp | ACAACCTCCCACATCACCTCCAAACACATCCTCATGTCATCTGCAAACACACCCGGCACCAGTCCAGCCTaGTTCAGCTGCCTCCACAGT | + |
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Preference number: 4 (lower is better) Translates to: TTSHITSKHILMSSANTPGTSPA*FSCLHS Trigger: ACTGTGGAGGCAGCTGAATCAGGCTGGACTGGTGCC...GGGTGTGTTTGCAGATGACATGAGGATGTGTTTGGAGGTGATGTGGGAGGTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378187.3 |
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| CDS-3UTR TCA 90 bp | ACAACCTCCCACATCACCTCCAAACACATCCTCATGTCATCTGCAAACACACCCCCTCCTCCAATATGGTaGCCAGTTCCTCCCGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: TTSHITSKHILMSSANTPPPPIW*PVPPAA Trigger: CGCTGCGGGAGGAACTGGTCACCATATTGGAGGAGG...GGGTGTGTTTGCAGATGACATGAGGATGTGTTTGGAGGTGATGTGGGAGGTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378187.3 |
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| CDS-3UTR GCA 90 bp | AACACACCCATAGCTCACAGGCCAATGCCTAAATATCATTGCAGGCACCTTCAGGGCACCTCCAGTGTCTaGCCCTGCAGTCCTGAGGGT | + |
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Preference number: 4 (lower is better) Translates to: NTPIAHRPMPKYHCRHLQGTSSV*PCSPEG Trigger: ACCCTCAGGACTGCAGGGGCAGACACTGGAGGTGCC...CTGAAGGTGCCTGCAATGATATTTAGGCATTGGCCTGTGAGCTATGGGTGTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378187.3 |
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| CDS-3UTR GCA 90 bp | AACACACCCATAGCTCACAGGCCAATGCCTAAATATCATTGCAGGCACCTTCAGTCCAGTGTCTGCCCCTaGAGTCCTGAGGGTCTGACC | + |
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Preference number: 4 (lower is better) Translates to: NTPIAHRPMPKYHCRHLQSSVCP*SPEGLT Trigger: GGTCAGACCCTCAGGACTGCAGGGGCAGACACTGGA...CTGAAGGTGCCTGCAATGATATTTAGGCATTGGCCTGTGAGCTATGGGTGTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378187.3 |
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| CDS-3UTR CCA 90 bp | AACACACCCATAGCTCACAGGCCAATGCCTAAATATCATTGCAGGCACCTTCAGACCAGGGATTTCCACTaGGGAGACCTCCCTCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: NTPIAHRPMPKYHCRHLQTRDFH*GDLPQG Trigger: GCCCTGAGGGAGGTCTCCCCAGTGGAAATCCCTGGT...CTGAAGGTGCCTGCAATGATATTTAGGCATTGGCCTGTGAGCTATGGGTGTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378187.3 |
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| CDS-3UTR GCA 90 bp | ACCAGCATATTTGCAGAGATCCCCATCTCAGCAGCACACCTGAGGCTCATCTGCATCTGCGAAAGCACCTaGAACTTCTCTACAACCTCC | + |
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Preference number: 4 (lower is better) Translates to: TSIFAEIPISAAHLRLICICEST*NFSTTS Trigger: GGAGGTTGTAGAGAAGTTGCAGGTGCTTTCGCAGAT...GCAGATGAGCCTCAGGTGTGCTGCTGAGATGGGGATCTCTGCAAATATGCTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378187.3 |
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| CDS-3UTR GCA 90 bp | ACAACCTCCCACATCACCTCCAAACACATCCTCATGTCATCTGCAAACACACCCCACCTGAGGCTCATCTaGGAAAGCACCTGCAACTTC | + |
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Preference number: 4 (lower is better) Translates to: TTSHITSKHILMSSANTPHLRLI*ESTCNF Trigger: GAAGTTGCAGGTGCTTTCGCAGATGAGCCTCAGGTG...GGGTGTGTTTGCAGATGACATGAGGATGTGTTTGGAGGTGATGTGGGAGGTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378187.3 |
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| CDS-3UTR TCA 90 bp | TCATCTGCAAACACACCCATAGCTCACAGGCCAATGCCTAAATATCATTGCAGGTCTCAGCAGCACACCTaGGGCTCATCTGCGAAAGCA | + |
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Preference number: 4 (lower is better) Translates to: SSANTPIAHRPMPKYHCRSQQHT*GSSAKA Trigger: TGCTTTCGCAGATGAGCCTCAGGTGTGCTGCTGAGA...CCTGCAATGATATTTAGGCATTGGCCTGTGAGCTATGGGTGTGTTTGCAGATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378187.3 |
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| CDS-3UTR GCA 90 bp | TGCAGAGATCCCCATCTCAGCAGCACACCTGAGGCTCATCTGCGAAAGCACCTGATGCCTAAATATCATTaGAGGCACCTTCAGAGAAAG | + |
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Preference number: 4 (lower is better) Translates to: CRDPHLSSTPEAHLRKHLMPKYH*RHLQRK Trigger: CTTTCTCTGAAGGTGCCTGCAATGATATTTAGGCAT...CAGGTGCTTTCGCAGATGAGCCTCAGGTGTGCTGCTGAGATGGGGATCTCTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378187.3 |
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| CDS-3UTR GCA 90 bp | ACCAGCATATTTGCAGAGATCCCCATCTCAGCAGCACACCTGAGGCTCATCTGCCATCCTCATGTCATCTaGAAACACACCCATAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: TSIFAEIPISAAHLRLICHPHVI*KHTHSS Trigger: TGAGCTATGGGTGTGTTTGCAGATGACATGAGGATG...GCAGATGAGCCTCAGGTGTGCTGCTGAGATGGGGATCTCTGCAAATATGCTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378187.3 |
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| CDS-3UTR CCA 90 bp | GTTGATCTGAAATCGCATCTGTATGCATCACCAGCATATTTGCAGAGATCCCCAACCATGTGTGTCCGGTaGCTACCATACTGGACAGCG | + |
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Preference number: 4 (lower is better) Translates to: VDLKSHLYASPAYLQRSPTMCVR*LPYWTA Trigger: CGCTGTCCAGTATGGTAGCCACCGGACACACATGGT...TGGGGATCTCTGCAAATATGCTGGTGATGCATACAGATGCGATTTCAGATCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378187.3 |
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| CDS-3UTR GCA 90 bp | TCAGCAGCACACCTGAGGCTCATCTGCGAAAGCACCTGCAACTTCTCTACAACCGAAATCGCATCTGTATaGATCACCAGCATATTTGCA | + |
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Preference number: 4 (lower is better) Translates to: SAAHLRLICESTCNFSTTEIASV*ITSIFA Trigger: TGCAAATATGCTGGTGATGCATACAGATGCGATTTC...GGTTGTAGAGAAGTTGCAGGTGCTTTCGCAGATGAGCCTCAGGTGTGCTGCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378187.3 |
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| CDS-3UTR GCA 90 bp | GCTACCATACTGGACAGCGTTGATCTGAAATCGCATCTGTATGCATCACCAGCAACATCTGCTTTGACCTaGAAATCTCCCTTCTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: ATILDSVDLKSHLYASPATSALT*KSPFSF Trigger: AAAGGAGAAGGGAGATTTGCAGGTCAAAGCAGATGT...TGCTGGTGATGCATACAGATGCGATTTCAGATCAACGCTGTCCAGTATGGTAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378187.3 |
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| CDS-3UTR GCA 90 bp | TCATCTGCAAACACACCCATAGCTCACAGGCCAATGCCTAAATATCATTGCAGGCAGCACATCTCAATTTaGAGTCCCCATGTTTCAAGC | + |
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Preference number: 4 (lower is better) Translates to: SSANTPIAHRPMPKYHCRQHISI*SPHVSS Trigger: GCTTGAAACATGGGGACTGCAAATTGAGATGTGCTG...CCTGCAATGATATTTAGGCATTGGCCTGTGAGCTATGGGTGTGTTTGCAGATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378187.3 |
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| CDS-3UTR TCA 90 bp | CAGGCACCTTCAGAGAAAGCACTTACTAAAGGGGTATACTTGATTCCACATCTGCTAAAGGGGTATACTTaGTTCCACATCTGCTTTGAC | + |
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Preference number: 4 (lower is better) Translates to: QAPSEKALTKGVYLIPHLLKGYT*FHICFD Trigger: GTCAAAGCAGATGTGGAATCAAGTATACCCCTTTAG...CAGATGTGGAATCAAGTATACCCCTTTAGTAAGTGCTTTCTCTGAAGGTGCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378187.3 |
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| CDS TCA 90 bp | CCTCCTCCTCTTCCTTGCTGCTCTCCTCCTCCTCCTCCAATATGGTaGCCAGTTCCTCCCGCAGCGCCCCCATCTCCAGCCCCAGGCTGC | + |
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Preference number: 5 (lower is better) Translates to: PPPLPCCSPPPPPIW*PVPPAAPPSPAPGC Trigger: GCAGCCTGGGGCTGGAGATGGGGGCGCTGCGGGAGGAACTGGTCACCATATTGGAGGAGGAGGAGGAGAGCAGCAAGGAAGAGGAGGAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378187.3 |
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| CDS GCA 90 bp | CCTGATCCACAGCAGACTATCGCAGGCACCTCCAGTGTCTGCCCCTaGAGTCCTGAGGGTCTGACCAGGGATTTCCACTGGGGAGACCTC | + |
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Preference number: 5 (lower is better) Translates to: PDPQQTIAGTSSVCP*SPEGLTRDFHWGDL Trigger: GAGGTCTCCCCAGTGGAAATCCCTGGTCAGACCCTCAGGACTGCAGGGGCAGACACTGGAGGTGCCTGCGATAGTCTGCTGTGGATCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378187.3 |
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| CDS GCA 90 bp | CTCCTCCCTGATCCACAGCAGACTATCGCAGGCACCTCCAGTGTCTaGCCCTGCAGTCCTGAGGGTCTGACCAGGGATTTCCACTGGGGA | + |
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Preference number: 5 (lower is better) Translates to: LLPDPQQTIAGTSSV*PCSPEGLTRDFHWG Trigger: TCCCCAGTGGAAATCCCTGGTCAGACCCTCAGGACTGCAGGGGCAGACACTGGAGGTGCCTGCGATAGTCTGCTGTGGATCAGGGAGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378187.3 |
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| CDS CCA 90 bp | GGCAGAGCCTCAGATCATCATCTCAAAGTCAGGTGGATGTGGGGCTaGGCAGGCCTCCAGGTGTTCCTCCTCCTGCTTCCTCTGGGGCTC | + |
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Preference number: 5 (lower is better) Translates to: GRASDHHLKVRWMWG*AGLQVFLLLLPLGL Trigger: GAGCCCCAGAGGAAGCAGGAGGAGGAACACCTGGAGGCCTGCCCAGCCCCACATCCACCTGACTTTGAGATGATGATCTGAGGCTCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378187.3 |
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| CDS-3UTR CAA 90 bp | TCAGCAGCACACCTGAGGCTCATCTGCGAAAGCACCTGCAACTTCTCTACAACCGATTCCACATCTGCTTaGACCTGCAAATCTCCCTTC | + |
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Preference number: 5 (lower is better) Translates to: SAAHLRLICESTCNFSTTDSTSA*TCKSPF Trigger: GAAGGGAGATTTGCAGGTCAAAGCAGATGTGGAATC...GGTTGTAGAGAAGTTGCAGGTGCTTTCGCAGATGAGCCTCAGGTGTGCTGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378187.3 |
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| CDS-3UTR CAA 90 bp | TGTATGCATCACCAGCATATTTGCAGAGATCCCCATCTCAGCAGCACACCTGAGGCATCACCAGCATATTaGCAGAGATCCCCATCTCAG | + |
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Preference number: 5 (lower is better) Translates to: CMHHQHICRDPHLSSTPEASPAY*QRSPSQ Trigger: CTGAGATGGGGATCTCTGCAAATATGCTGGTGATGC...CTCAGGTGTGCTGCTGAGATGGGGATCTCTGCAAATATGCTGGTGATGCATACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378187.3 |
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| CDS TCA 72 bp | CTTCCTTGCTGCTCTCCTCCTCCTCCTCCAATATGGTaGCCAGTTCCTCCCGCAGCGCCCCCATCTCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: LPCCSPPPPPIW*PVPPAAPPSPA Trigger: GGCTGGAGATGGGGGCGCTGCGGGAGGAACTGGTCACCATATTGGAGGAGGAGGAGGAGAGCAGCAAGGAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378187.3 |
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| CDS GCA 72 bp | CAGCAGACTATCGCAGGCACCTCCAGTGTCTGCCCCTaGAGTCCTGAGGGTCTGACCAGGGATTTCCACTGG | + |
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Preference number: 6 (lower is better) Translates to: QQTIAGTSSVCP*SPEGLTRDFHW Trigger: CCAGTGGAAATCCCTGGTCAGACCCTCAGGACTGCAGGGGCAGACACTGGAGGTGCCTGCGATAGTCTGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378187.3 |
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| CDS GCA 72 bp | GATCCACAGCAGACTATCGCAGGCACCTCCAGTGTCTaGCCCTGCAGTCCTGAGGGTCTGACCAGGGATTTC | + |
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Preference number: 6 (lower is better) Translates to: DPQQTIAGTSSV*PCSPEGLTRDF Trigger: GAAATCCCTGGTCAGACCCTCAGGACTGCAGGGGCAGACACTGGAGGTGCCTGCGATAGTCTGCTGTGGATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378187.3 |
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| CDS CCA 72 bp | ACTGGCAGAGCCTCAGATCATCATCTCAAAGTCAGGTaGATGTGGGGCTGGGCAGGCCTCCAGGTGTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: TGRASDHHLKVR*MWGWAGLQVFL Trigger: GAGGAACACCTGGAGGCCTGCCCAGCCCCACATCCACCTGACTTTGAGATGATGATCTGAGGCTCTGCCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378187.3 |
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| CDS CCA 72 bp | TCAGATCATCATCTCAAAGTCAGGTGGATGTGGGGCTaGGCAGGCCTCCAGGTGTTCCTCCTCCTGCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: SDHHLKVRWMWG*AGLQVFLLLLP Trigger: AGGAAGCAGGAGGAGGAACACCTGGAGGCCTGCCCAGCCCCACATCCACCTGACTTTGAGATGATGATCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378187.3 |
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