RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ERICH3 (Homo sapiens)

Ensembl gene IDs: ENSG00000178965

Ensembl transcript IDs: ENST00000326665.10, ENST00000420661.6, ENST00000433746.2, ENST00000479666.1, ENST00000614534.1

Found 410 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCTACAGATCTACTTGAGCTATTCTCAAGGTGCTTACTGAGCTACTaGCCAGGGCTGACAGATTGGGAATCATCTCAGACAAGCGCAACC +
Preference number: 1 (lower is better)
Translates to: PTDLLELFSRCLLSY*PGLTDWESSQTSAT
Trigger: GGTTGCGCTTGTCTGAGATGATTCCCAATCTGTCAGCCCTGGTCAGTAGCTCAGTAAGCACCTTGAGAATAGCTCAAGTAGATCTGTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326665.10
3UTR TCA 90 bp AATGTTAGGTGTGTAGAATGTGTAACAGCCTCACAAGTTTCTCCATaGGGAACCACTGCTTCTAAGAAGGGTCCTACAGATCTACTTGAG +
Preference number: 1 (lower is better)
Translates to: NVRCVECVTASQVSP*GTTASKKGPTDLLE
Trigger: CTCAAGTAGATCTGTAGGACCCTTCTTAGAAGCAGTGGTTCCTCATGGAGAAACTTGTGAGGCTGTTACACATTCTACACACCTAACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326665.10
3UTR CAA 90 bp GCTATTCTCAAGGTGCTTACTGAGCTACTGACCAGGGCTGACAGATaGGGAATCATCTCAGACAAGCGCAACCAGCAACTAAAGAGGAGA +
Preference number: 2 (lower is better)
Translates to: AILKVLTELLTRADR*GIISDKRNQQLKRR
Trigger: TCTCCTCTTTAGTTGCTGGTTGCGCTTGTCTGAGATGATTCCCAATCTGTCAGCCCTGGTCAGTAGCTCAGTAAGCACCTTGAGAATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326665.10
3UTR-3UTR TCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAAGCTACTGACCAGGGCTaGCAGATTGGGAATCATCTC +
Preference number: 2 (lower is better)
Translates to: QNASVVGFPTETNPQYNQATDQG*QIGNHL
Trigger: GAGATGATTCCCAATCTGTCAGCCCTGGTCAGTAGC...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
3UTR-3UTR TCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAATGCTTACTGAGCTACTaGCCAGGGCTGACAGATTGG +
Preference number: 2 (lower is better)
Translates to: QNASVVGFPTETNPQYNQCLLSY*PGLTDW
Trigger: CCAATCTGTCAGCCCTGGTCAGTAGCTCAGTAAGCA...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
3UTR-3UTR CCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAACCAGGGCTGACAGATTaGGAATCATCTCAGACAAGC +
Preference number: 2 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQPGLTD*ESSQTS
Trigger: GCTTGTCTGAGATGATTCCCAATCTGTCAGCCCTGG...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326665.10
3UTR-3UTR TCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAAGACTGGGCCTTCCAGTaGTCTTTGGTAAAAGTCAAG +
Preference number: 2 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQDWAFQ*SLVKVK
Trigger: CTTGACTTTTACCAAAGATCACTGGAAGGCCCAGTC...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
3UTR-3UTR GCA 90 bp TTTCAAGTAGTTTGCCTTTGTAGACACAAAGGTTTTCCCCACCACAGTGCTGCTTTTCTCGGCCCTTTCTaGTATCCTCAAGTAAGTATC +
Preference number: 2 (lower is better)
Translates to: FQVVCLCRHKGFPHHSAAFLGPF*YPQVSI
Trigger: GATACTTACTTGAGGATAGCAGAAAGGGCCGAGAAA...AGCAGCACTGTGGTGGGGAAAACCTTTGTGTCTACAAAGGCAAACTACTTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000479666.1
3UTR-3UTR TCA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAAATGTCTTCAGGGAAATaGAAACCCCTAGGAGACAGG +
Preference number: 2 (lower is better)
Translates to: ASHENLMYILAGKSLLKEMSSGK*KPLGDR
Trigger: CCTGTCTCCTAGGGGTTTTCATTTCCCTGAAGACAT...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326665.10
3UTR-3UTR GCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAACCTACTATGATAATATaGCTGGTCCCTAGGGACCTT +
Preference number: 2 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQPTMII*LVPRDL
Trigger: AAGGTCCCTAGGGACCAGGCATATTATCATAGTAGG...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326665.10
3UTR-3UTR TCA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAAGGTGAGATGCTTGCGTaGATCTTTCTCCACTCTTTA +
Preference number: 2 (lower is better)
Translates to: ASHENLMYILAGKSLLKEGEMLA*IFLHSL
Trigger: TAAAGAGTGGAGAAAGATTCACGCAAGCATCTCACC...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
3UTR-3UTR TCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAATTGAGATTGTGGAATTaGCTGGGGCTCTGTATTGTA +
Preference number: 2 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQLRLWN*LGLCIV
Trigger: TACAATACAGAGCCCCAGTCAATTCCACAATCTCAA...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
3UTR-3UTR TCA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAAGATTTGGAGCAATCTTaGGTTTTGAGTGTACGTGGG +
Preference number: 2 (lower is better)
Translates to: ASHENLMYILAGKSLLKEDLEQS*VLSVRG
Trigger: CCCACGTACACTCAAAACTCAAGATTGCTCCAAATC...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326665.10
3UTR-3UTR TCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAACAGAACTTGGGAAGGTaGGCAGCACACTCATTTAAT +
Preference number: 2 (lower is better)
Translates to: QNASVVGFPTETNPQYNQQNLGR*AAHSFN
Trigger: ATTAAATGAGTGTGCTGCTCACCTTCCCAAGTTCTG...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
3UTR-3UTR GCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAAAGAATCCTGGTGAGATaGTTGCGTGAATCTTTCTCC +
Preference number: 2 (lower is better)
Translates to: QNASVVGFPTETNPQYNQRILVR*LRESFS
Trigger: GGAGAAAGATTCACGCAAGCATCTCACCAGGATTCT...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
3UTR-3UTR CCA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAACATATACATGCGCTCTaGGGCACTTGTATGTCTTCA +
Preference number: 2 (lower is better)
Translates to: ASHENLMYILAGKSLLKEHIHAL*GTCMSS
Trigger: TGAAGACATACAAGTGCCCCAGAGCGCATGTATATG...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
3UTR-3UTR CCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAAAGCGGTTCTCAACCTTaGCTACAGAGAAGAATCAAG +
Preference number: 2 (lower is better)
Translates to: QNASVVGFPTETNPQYNQSGSQP*LQRRIK
Trigger: CTTGATTCTTCTCTGTAGCCAAGGTTGAGAACCGCT...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
3UTR-3UTR CCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAAGTAGGAGACAAAGGCTaGGAACAATTTCCAGGTGAT +
Preference number: 2 (lower is better)
Translates to: QNASVVGFPTETNPQYNQVGDKG*EQFPGD
Trigger: ATCACCTGGAAATTGTTCCCAGCCTTTGTCTCCTAC...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
3UTR-3UTR TCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAAAATCAAGAATCCTGGTaGGATGCTTGCGTGAATCTT +
Preference number: 2 (lower is better)
Translates to: QNASVVGFPTETNPQYNQNQESW*DACVNL
Trigger: AAGATTCACGCAAGCATCTCACCAGGATTCTTGATT...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
3UTR-3UTR TCA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAATCCTACAGATCTACTTaGGCTATTCTCAAGGTGCTT +
Preference number: 2 (lower is better)
Translates to: ASHENLMYILAGKSLLKESYRST*AILKVL
Trigger: AAGCACCTTGAGAATAGCTCAAGTAGATCTGTAGGA...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
3UTR-3UTR TCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAAAGCAATCTTGAGTTTTaGGTGTACGTGGGAGGAAAT +
Preference number: 2 (lower is better)
Translates to: QNASVVGFPTETNPQYNQSNLEF*VYVGGN
Trigger: ATTTCCTCCCACGTACACTCAAAACTCAAGATTGCT...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
3UTR-3UTR GCA 90 bp AAAAATCTTGAATCCCTAAAGCATTGTCACAGTAGTATTTCCCAAGCTTTGGCACAAAATCAGCTTCCATaGATGAGGATGATGGCAGCT +
Preference number: 2 (lower is better)
Translates to: KNLESLKHCHSSISQALAQNQLP*MRMMAA
Trigger: AGCTGCCATCATCCTCATGCATGGAAGCTGATTTTG...TGCCAAAGCTTGGGAAATACTACTGTGACAATGCTTTAGGGATTCAAGATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420661.6
3UTR-3UTR CCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAAGACCAGTCTACTATCTaGTCCAGTGTATTTTTGATC +
Preference number: 2 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQDQSTI*SSVFLI
Trigger: GATCAAAAATACACTGGACCAGATAGTAGACTGGTC...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326665.10
3UTR-3UTR TCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAAGGTCCAGTGTATTTTTaGTCATTGAATGGCTCCATT +
Preference number: 2 (lower is better)
Translates to: QNASVVGFPTETNPQYNQGPVYF*SLNGSI
Trigger: AATGGAGCCATTCAATGATCAAAAATACACTGGACC...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326665.10
3UTR-3UTR TCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAAGTTAGTTCACAGGTTTaGAATAACAGAACTTGGGAA +
Preference number: 2 (lower is better)
Translates to: QNASVVGFPTETNPQYNQVSSQV*NNRTWE
Trigger: TTCCCAAGTTCTGTTATTTCAAACCTGTGAACTAAC...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
3UTR-3UTR CCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAACAAGAAATCTTTTGCTaGAAGAACTTAGAGATTTGG +
Preference number: 2 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQQEIFC*KNLEIW
Trigger: CCAAATCTCTAAGTTCTTCCAGCAAAAGATTTCTTG...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
3UTR-3UTR CCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAATTATTTAAATTTGAGTaGCCCTATAAAGAAGGCCCC +
Preference number: 2 (lower is better)
Translates to: QNASVVGFPTETNPQYNQLFKFE*PYKEGP
Trigger: GGGGCCTTCTTTATAGGGCCACTCAAATTTAAATAA...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
3UTR-3UTR GCA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAATGCCAAGAAATCTTTTaGTGGAAGAACTTAGAGATT +
Preference number: 2 (lower is better)
Translates to: ASHENLMYILAGKSLLKECQEIF*WKNLEI
Trigger: AATCTCTAAGTTCTTCCAGCAAAAGATTTCTTGGCA...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326665.10
3UTR-3UTR CAA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAATGGTCCCTAGGGACCTaGAGTGTAATGTGGCCAGCA +
Preference number: 3 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQWSLGT*SVMWPA
Trigger: TGCTGGCCACATTACACTCAAGGTCCCTAGGGACCA...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326665.10
3UTR-3UTR CAA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAAACCAGGGCTGACAGATaGGGAATCATCTCAGACAAG +
Preference number: 3 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQTRADR*GIISDK
Trigger: CTTGTCTGAGATGATTCCCAATCTGTCAGCCCTGGT...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326665.10
3UTR-3UTR CAA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAATGCGCTCTGGGGCACTaGTATGTCTTCAGGGAAATG +
Preference number: 3 (lower is better)
Translates to: QNASVVGFPTETNPQYNQCALGH*YVFREM
Trigger: CATTTCCCTGAAGACATACAAGTGCCCCAGAGCGCA...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
3UTR-3UTR CAA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAACAGCGGTTCTCAACCTaGGCTACAGAGAAGAATCAA +
Preference number: 3 (lower is better)
Translates to: QNASVVGFPTETNPQYNQQRFST*ATEKNQ
Trigger: TTGATTCTTCTCTGTAGCCAAGGTTGAGAACCGCTG...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
3UTR-3UTR CAA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAAGTCCTACAGATCTACTaGAGCTATTCTCAAGGTGCT +
Preference number: 3 (lower is better)
Translates to: ASHENLMYILAGKSLLKEVLQIY*SYSQGA
Trigger: AGCACCTTGAGAATAGCTCAAGTAGATCTGTAGGAC...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
3UTR-3UTR CAA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAAATTGAGATTGTGGAATaGACTGGGGCTCTGTATTGT +
Preference number: 3 (lower is better)
Translates to: QNASVVGFPTETNPQYNQIEIVE*TGALYC
Trigger: ACAATACAGAGCCCCAGTCAATTCCACAATCTCAAT...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
3UTR-3UTR CAA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAAAGATTTGGAGCAATCTaGAGTTTTGAGTGTACGTGG +
Preference number: 3 (lower is better)
Translates to: QNASVVGFPTETNPQYNQRFGAI*SFECTW
Trigger: CCACGTACACTCAAAACTCAAGATTGCTCCAAATCT...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
3UTR TCA 72 bp AGAGAGAAAATCAAGAATCCTGGTGAGATGCTTGCGTaGATCTTTCTCCACTCTTTACATCTTCAGAAGACA +
Preference number: 3 (lower is better)
Translates to: REKIKNPGEMLA*IFLHSLHLQKT
Trigger: TGTCTTCTGAAGATGTAAAGAGTGGAGAAAGATTCACGCAAGCATCTCACCAGGATTCTTGATTTTCTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
3UTR-3UTR CAA 90 bp ACAGTGCTGCTGATAAACTTTAATTTCATCCCGGAAGTCAGGATTATCAGAAGAAAAATTCAGTTCCATTaGAAGAACAGGAACAAGGCC +
Preference number: 3 (lower is better)
Translates to: TVLLINFNFIPEVRIIRRKIQFH*KNRNKA
Trigger: GGCCTTGTTCCTGTTCTTCAAATGGAACTGAATTTT...TCTTCTGATAATCCTGACTTCCGGGATGAAATTAAAGTTTATCAGCAGCACTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479666.1
3UTR TCA 72 bp TGGAAGAACTTAGAGATTTGGAGCAATCTTGAGTTTTaGGTGTACGTGGGAGGAAATTTAGAGCTCATTTTC +
Preference number: 3 (lower is better)
Translates to: WKNLEIWSNLEF*VYVGGNLELIF
Trigger: GAAAATGAGCTCTAAATTTCCTCCCACGTACACTCAAAACTCAAGATTGCTCCAAATCTCTAAGTTCTTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
3UTR-3UTR CAA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAAATGCCAAGAAATCTTTaGCTGGAAGAACTTAGAGAT +
Preference number: 3 (lower is better)
Translates to: QNASVVGFPTETNPQYNQMPRNL*LEELRD
Trigger: ATCTCTAAGTTCTTCCAGCAAAAGATTTCTTGGCAT...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
3UTR GCA 72 bp ACAAATGAAACTTTAATAAGGTTTCTCGGCCCTTTCTaGTATCCTCAAGTAAGTATCAAAACCTTCCATGAA +
Preference number: 3 (lower is better)
Translates to: TNETLIRFLGPF*YPQVSIKTFHE
Trigger: TTCATGGAAGGTTTTGATACTTACTTGAGGATAGCAGAAAGGGCCGAGAAACCTTATTAAAGTTTCATTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479666.1
CDS-3UTR CCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAAGTCGCGCTCGAGGGGTaGCTCCGCACCGAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQVALEG*LRTEVP
Trigger: GGGGACCTCGGTGCGGAGCCACCCCTCGAGCGCGAC...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAACGTGCGCGCTGGCGCTaGGACAGTCGCGCTCGAGGG +
Preference number: 4 (lower is better)
Translates to: QNASVVGFPTETNPQYNQRARWR*DSRARG
Trigger: CCCTCGAGCGCGACTGTCGCAGCGCCAGCGCGCACG...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAACCGCTCCAGGGCTCCTaGAGTGCCCACCCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: QNASVVGFPTETNPQYNQPLQGS*SAHPSL
Trigger: GAGGCTGGGGTGGGCACTCCAGGAGCCCTGGAGCGG...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAATGCCTGGCCTGTGGCTaGGATCAGCCCCTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: ASHENLMYILAGKSLLKECLACG*DQPLRG
Trigger: GCCCCTGAGGGGCTGATCCCAGCCACAGGCCAGGCA...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAACAAGCGCCCAGGGTCTaGAGAAGCGGAGGCGCTACT +
Preference number: 4 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQQAPRV*RSGGAT
Trigger: AGTAGCGCCTCCGCTTCTCCAGACCCTGGGCGCTTG...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326665.10
3UTR CAA 72 bp AAGGTGCTTACTGAGCTACTGACCAGGGCTGACAGATaGGGAATCATCTCAGACAAGCGCAACCAGCAACTA +
Preference number: 4 (lower is better)
Translates to: KVLTELLTRADR*GIISDKRNQQL
Trigger: TAGTTGCTGGTTGCGCTTGTCTGAGATGATTCCCAATCTGTCAGCCCTGGTCAGTAGCTCAGTAAGCACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAACTGCCCTCCGAAACCTaGATCCGGCTTGCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: ASHENLMYILAGKSLLKELPSET*IRLASA
Trigger: GGCAGAGGCAAGCCGGATGCAGGTTTCGGAGGGCAG...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAATTGCAGGATCCCTTTTaGACCCCGCGGCAGGTGCGG +
Preference number: 4 (lower is better)
Translates to: QNASVVGFPTETNPQYNQLQDPF*TPRQVR
Trigger: CCGCACCTGCCGCGGGGTCCAAAAGGGATCCTGCAA...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAAGCCCCCTCTCCATCTTaGCGGTGCCCTTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: QNASVVGFPTETNPQYNQAPSPS*RCPSFR
Trigger: CCTGAAGGAAGGGCACCGCCAAGATGGAGAGGGGGC...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAACCAGTGGCTGCCTCCTaGCCCTCTGACCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: QNASVVGFPTETNPQYNQPVAAS*PSDPSS
Trigger: AGAGGAAGGGTCAGAGGGCCAGGAGGCAGCCACTGG...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR TCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAACCTCTGCCTCTCCTGTaGAGGGGCTCAAGCGTGTTT +
Preference number: 4 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQPLPLL*RGSSVF
Trigger: AAACACGCTTGAGCCCCTTCACAGGAGAGGCAGAGG...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR TCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAACCTGCGCAGGAGTCGTaGTCTTTGGCTGCTAGCTCC +
Preference number: 4 (lower is better)
Translates to: QNASVVGFPTETNPQYNQPAQES*SLAASS
Trigger: GGAGCTAGCAGCCAAAGATCACGACTCCTGCGCAGG...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAATTCTGCTGCTCCCTCTaGCCCCCTTTCTATGCCTGG +
Preference number: 4 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQFCCSL*PPFYAW
Trigger: CCAGGCATAGAAAGGGGGGCAGAGGGAGCAGCAGAA...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAACTCCTCCGATGTCGCTaGCTCTCTCAGGGCTGCTAC +
Preference number: 4 (lower is better)
Translates to: ASHENLMYILAGKSLLKELLRCR*LSQGCY
Trigger: GTAGCAGCCCTGAGAGAGGCAGCGACATCGGAGGAG...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAATTCCTTCCTCAGGGCTaGCCTCCGAAACCTGCATCC +
Preference number: 4 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQFLPQG*PPKPAS
Trigger: GGATGCAGGTTTCGGAGGGCAGCCCTGAGGAAGGAA...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAAGGCTGTCTCCGAACCTaGCAACACCTCCCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: ASHENLMYILAGKSLLKEGCLRT*QHLPLL
Trigger: GAGGAGAGGGAGGTGTTGGCAGGTTCGGAGACAGCC...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAACTTTGGGCCAACTGGTaGGTGGGGAGACAGGATTGG +
Preference number: 4 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQLWANW*VGRQDW
Trigger: CCAATCCTGTCTCCCCACCCACCAGTTGGCCCAAAG...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAAGCCACGATTACTCTTTaGGCCAACTGGTGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQATITL*ANWWVG
Trigger: CCCCACCCACCAGTTGGCCCAAAGAGTAATCGTGGC...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAATGGCTGCTCTGCTGTTaGCTTCCACGCCCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: QNASVVGFPTETNPQYNQWLLCC*LPRPQG
Trigger: CCCTTGAGGGCGTGGAAGCCAACAGCAGAGCAGCCA...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR TCA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAACTCAAGGGAGCCTCATaGACAGCTCCTGCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: ASHENLMYILAGKSLLKELKGAS*TAPASP
Trigger: GGGAGAAGCAGGAGCTGTTCATGAGGCTCCCTTGAG...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp TTCCTGAGATGGAATTCCCATAGGAGGGAATTTACCGAAAATAGGAAACAGGCTTTCCCTGTCCCCCACTaGAGATTCATCCTCACTGTC +
Preference number: 4 (lower is better)
Translates to: FLRWNSHRREFTENRKQAFPVPH*RFILTV
Trigger: GACAGTGAGGATGAATCTGCAGTGGGGGACAGGGAA...AGCCTGTTTCCTATTTTCGGTAAATTCCCTCCTATGGGAATTCCATCTCAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR GCA 90 bp TTCCTGAGATGGAATTCCCATAGGAGGGAATTTACCGAAAATAGGAAACAGGCTCACTTTCATCTGTGCTaGTGTCAGTGTGGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: FLRWNSHRREFTENRKQAHFHLC*CQCGLP
Trigger: GGGAAGCCCACACTGACAGCAGCACAGATGAAAGTG...AGCCTGTTTCCTATTTTCGGTAAATTCCCTCCTATGGGAATTCCATCTCAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR GCA 90 bp GTAGTATTTCCCAAGCTTTGGCATAGTGCAATGACCAAAATCAGCTTCCATGCACAACCCAGGGAGACCTaGCTTTTTGTCCTTCACCTG +
Preference number: 4 (lower is better)
Translates to: VVFPKLWHSAMTKISFHAQPRET*LFVLHL
Trigger: CAGGTGAAGGACAAAAAGGCAGGTCTCCCTGGGTTG...TGCATGGAAGCTGATTTTGGTCATTGCACTATGCCAAAGCTTGGGAAATACTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR GCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAACAATTCTGGCTGCTCTaGTGTTGGCTTCCACGCCCT +
Preference number: 4 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQQFWLL*CWLPRP
Trigger: AGGGCGTGGAAGCCAACAGCAGAGCAGCCAGAATTG...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAATCTCCATCTTGGCGGTaGCCTTCCTTCAGGGCCCTA +
Preference number: 4 (lower is better)
Translates to: QNASVVGFPTETNPQYNQSPSWR*PSFRAL
Trigger: TAGGGCCCTGAAGGAAGGGCACCGCCAAGATGGAGA...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAACTCTGCGGCTGTTTCTaGCGTTTCACCACCTCCGTG +
Preference number: 4 (lower is better)
Translates to: QNASVVGFPTETNPQYNQLCGCF*RFTTSV
Trigger: CACGGAGGTGGTGAAACGGCAGAAACAGCCGCAGAG...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAACACTGTCATCTCCTCTaGTGCTGGCACTTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: QNASVVGFPTETNPQYNQHCHLL*CWHFLP
Trigger: GGGGAGGAAGTGCCAGCAGCAGAGGAGATGACAGTG...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp TTCCTGAGATGGAATTCCCATAGGAGGGAATTTACCGAAAATAGGAAACAGGCTCCCAGTTGGGGGAAGTaGAGGAGGAATAGGCATCAT +
Preference number: 4 (lower is better)
Translates to: FLRWNSHRREFTENRKQAPSWGK*RRNRHH
Trigger: ATGATGCCTATTCCTCCTCCACTTCCCCCAACTGGG...AGCCTGTTTCCTATTTTCGGTAAATTCCCTCCTATGGGAATTCCATCTCAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR CCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAATCAGCATCTCTGTGCTaGGGCGCTTCATCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQSASLC*GASSSS
Trigger: GGAGGAAGATGAAGCGCCCCAGCACAGAGATGCTGA...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAACTGCACCTTTCCTGCTaGCTCAGCTTCAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: ASHENLMYILAGKSLLKELHLSC*LSFRSC
Trigger: GCAGCTCCTGAAGCTGAGCCAGCAGGAAAGGTGCAG...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp TTTCATCCCGGAAGTCAGGATTATCAGAAGATAGGTGCACATTTTTCCCCAAATCTGCCTTCTTGCCCTTaGCAAGCATGGAAAGCACCC +
Preference number: 4 (lower is better)
Translates to: FHPGSQDYQKIGAHFSPNLPSCP*QAWKAP
Trigger: GGGTGCTTTCCATGCTTGCCAAGGGCAAGAAGGCAG...ATTTGGGGAAAAATGTGCACCTATCTTCTGATAATCCTGACTTCCGGGATGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479666.1
CDS-3UTR TCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAAGCTACTGACCAGGGCTaGCAGATTGGGAATCATCTC +
Preference number: 4 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQATDQG*QIGNHL
Trigger: GAGATGATTCCCAATCTGTCAGCCCTGGTCAGTAGC...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAACACTTTCATCTGTGCTaGTGTCAGTGTGGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQHFHLC*CQCGLP
Trigger: GGGAAGCCCACACTGACAGCAGCACAGATGAAAGTG...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp TTCCTGAGATGGAATTCCCATAGGAGGGAATTTACCGAAAATAGGAAACAGGCTTGGCACTTTCATCTGTaGTGCTGTCAGTGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: FLRWNSHRREFTENRKQAWHFHL*CCQCGL
Trigger: AAGCCCACACTGACAGCAGCACAGATGAAAGTGCCA...AGCCTGTTTCCTATTTTCGGTAAATTCCCTCCTATGGGAATTCCATCTCAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR GCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAACTCTCCCCCAAGAATTaGCTCTTCAGAACCGTCCTC +
Preference number: 4 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQLSPKN*LFRTVL
Trigger: GAGGACGGTTCTGAAGAGGCAATTCTTGGGGGAGAG...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAATCTCCCCTCCAGTCCTaGGCAGGAGTCGTGATCTTT +
Preference number: 4 (lower is better)
Translates to: ASHENLMYILAGKSLLKESPLQS*AGVVIF
Trigger: AAAGATCACGACTCCTGCGCAGGACTGGAGGGGAGA...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAATCGGAATTTTTCAGCTaGTCCTGTCTCCTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQSEFFS*SCLLPP
Trigger: GGGAGGCAGGAGACAGGAGCAGCTGAAAAATTCCGA...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAAACTCTTTGGGCCAACTaGTGGGTGGGGAGACAGGAT +
Preference number: 4 (lower is better)
Translates to: QNASVVGFPTETNPQYNQTLWAN*WVGRQD
Trigger: ATCCTGTCTCCCCACCCACCAGTTGGCCCAAAGAGT...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAATCCTGGAGCAGTATATaGTCGAGGGGCTGTCAGTGC +
Preference number: 4 (lower is better)
Translates to: ASHENLMYILAGKSLLKESWSSI*SRGCQC
Trigger: GCACTGACAGCCCCTCGACCATATACTGCTCCAGGA...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAATCAGCAACAGCTTCCTaGGTCCTTAGCACGACATCC +
Preference number: 4 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQSATAS*VLSTTS
Trigger: GGATGTCGTGCTAAGGACCCAGGAAGCTGTTGCTGA...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp GTCACAGTAGTATTTCCCAAGCTTTGGCATAGTGCAATGACCAAAATCAGCTTCTGCCCTTGGCAAGCATaGAAAGCACCCATCCAAGTA +
Preference number: 4 (lower is better)
Translates to: VTVVFPKLWHSAMTKISFCPWQA*KAPIQV
Trigger: TACTTGGATGGGTGCTTTCCATGCTTGCCAAGGGCA...GAAGCTGATTTTGGTCATTGCACTATGCCAAAGCTTGGGAAATACTACTGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR TCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAAAGGGCTGCTACTTCATaGAGATGCTCCAAGTTCAGG +
Preference number: 4 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQRAATS*RCSKFR
Trigger: CCTGAACTTGGAGCATCTTCATGAAGTAGCAGCCCT...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR TCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAACCACCGCTTCCTCCCTaGACTTTTCTGCCATTATGG +
Preference number: 4 (lower is better)
Translates to: QNASVVGFPTETNPQYNQPPLPP*TFLPLW
Trigger: CCATAATGGCAGAAAAGTTCAGGGAGGAAGCGGTGG...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR TCA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAATGCTTACTGAGCTACTaGCCAGGGCTGACAGATTGG +
Preference number: 4 (lower is better)
Translates to: ASHENLMYILAGKSLLKECLLSY*PGLTDW
Trigger: CCAATCTGTCAGCCCTGGTCAGTAGCTCAGTAAGCA...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAACCTGAACTTCATCACTaGCTTCTTGCCCCCAATGGG +
Preference number: 4 (lower is better)
Translates to: QNASVVGFPTETNPQYNQPELHH*LLAPNG
Trigger: CCCATTGGGGGCAAGAAGGCAGTGATGAAGTTCAGG...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAACAAAGTAGCCTCGTTTaGCTCCAAGCCTGGAACCTT +
Preference number: 4 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQQSSLV*LQAWNL
Trigger: AAGGTTCCAGGCTTGGAGGCAAACGAGGCTACTTTG...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAATTCCCTGTCCCCCACTaGAGATTCATCCTCACTGTC +
Preference number: 4 (lower is better)
Translates to: ASHENLMYILAGKSLLKEFPVPH*RFILTV
Trigger: GACAGTGAGGATGAATCTGCAGTGGGGGACAGGGAA...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp GTCACAGTAGTATTTCCCAAGCTTTGGCATAGTGCAATGACCAAAATCAGCTTCCCTTCACCTGAGCAGTaGTTTCTTCCCAAAGCTTAC +
Preference number: 4 (lower is better)
Translates to: VTVVFPKLWHSAMTKISFPSPEQ*FLPKAY
Trigger: GTAAGCTTTGGGAAGAAAGCACTGCTCAGGTGAAGG...GAAGCTGATTTTGGTCATTGCACTATGCCAAAGCTTGGGAAATACTACTGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR GCA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAACAACCCAGGGAGACCTaGCTTTTTGTCCTTCACCTG +
Preference number: 4 (lower is better)
Translates to: ASHENLMYILAGKSLLKEQPRET*LFVLHL
Trigger: CAGGTGAAGGACAAAAAGGCAGGTCTCCCTGGGTTG...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAAATGTCAGCATCTCTGTaGTGGGGCGCTTCATCTTCC +
Preference number: 4 (lower is better)
Translates to: QNASVVGFPTETNPQYNQMSASL*WGASSS
Trigger: GGAAGATGAAGCGCCCCAGCACAGAGATGCTGACAT...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAACAAGTTCAGGGCTGCTaGTTCATTTGCAAGCACTGC +
Preference number: 4 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQQVQGC*FICKHC
Trigger: GCAGTGCTTGCAAATGAAGCAGCAGCCCTGAACTTG...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAATGCCTCTCTCAGGGCTaGTACTTCATGAAGATGCTC +
Preference number: 4 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQCLSQG*YFMKML
Trigger: GAGCATCTTCATGAAGTAGCAGCCCTGAGAGAGGCA...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAAAGAAGCCTCCACAGGTaGTTCGTTCTCAGCATCAGA +
Preference number: 4 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQRSLHR*FVLSIR
Trigger: TCTGATGCTGAGAACGAAGCACCTGTGGAGGCTTCT...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp GTAGTTTGCCTTTGTAGACACAAAGGTTTTCCCCACCACAGTGCTGCTGATAAAAAGGCCTCATGCCCCTaGATAACTAAAGCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: VVCLCRHKGFPHHSAADKKASCP*ITKALL
Trigger: AAGAAGAGCTTTAGTTATGCAGGGGCATGAGGCCTT...TTTATCAGCAGCACTGTGGTGGGGAAAACCTTTGTGTCTACAAAGGCAAACTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000479666.1
CDS-3UTR CCA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAACCCAGTTGGGGGAAGTaGAGGAGGAATAGGCATCAT +
Preference number: 4 (lower is better)
Translates to: ASHENLMYILAGKSLLKEPSWGK*RRNRHH
Trigger: ATGATGCCTATTCCTCCTCCACTTCCCCCAACTGGG...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp GTAGTATTTCCCAAGCTTTGGCATAGTGCAATGACCAAAATCAGCTTCCATGCAGAGAAGATGACCTTCTaGCACTTTCATCTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: VVFPKLWHSAMTKISFHAEKMTF*HFHLCC
Trigger: GCAGCACAGATGAAAGTGCCAGAAGGTCATCTTCTC...TGCATGGAAGCTGATTTTGGTCATTGCACTATGCCAAAGCTTGGGAAATACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR CCA 90 bp TTCCTGAGATGGAATTCCCATAGGAGGGAATTTACCGAAAATAGGAAACAGGCTAAAGCTTTCGTCTATTaGCATCGGCTTGGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: FLRWNSHRREFTENRKQAKAFVY*HRLGLH
Trigger: GTGGAGACCAAGCCGATGCCAATAGACGAAAGCTTT...AGCCTGTTTCCTATTTTCGGTAAATTCCCTCCTATGGGAATTCCATCTCAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR CCA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAAATGCTGTGTCCTCCATaGGTCCTGTGTCCTCTAGGT +
Preference number: 4 (lower is better)
Translates to: ASHENLMYILAGKSLLKEMLCPP*VLCPLG
Trigger: ACCTAGAGGACACAGGACCCATGGAGGACACAGCAT...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAAAGGAGTCGTGATCTTTaGCTGCTAGCTCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: QNASVVGFPTETNPQYNQRSRDL*LLAPLP
Trigger: AGGCAGAGGAGCTAGCAGCCAAAGATCACGACTCCT...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAAAGACCTGCACGTTGTTaGGGGAAACATCTGCAGTCT +
Preference number: 4 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQRPARC*GKHLQS
Trigger: AGACTGCAGATGTTTCCCCCAACAACGTGCAGGTCT...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp ATTTCATTCCTGAGATGGAATTCCCATAGGAGGGAATTTACCGAAAATAGGAAACTGCCTTCTTGCCCTTaGCAAGCATGGAAAGCACCC +
Preference number: 4 (lower is better)
Translates to: ISFLRWNSHRREFTENRKLPSCP*QAWKAP
Trigger: GGGTGCTTTCCATGCTTGCCAAGGGCAAGAAGGCAG...TTTCCTATTTTCGGTAAATTCCCTCCTATGGGAATTCCATCTCAGGAATGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR TCA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAAAGTAACCCAGCGGGGTaGGAATGGCTCATTTTTGCA +
Preference number: 4 (lower is better)
Translates to: ASHENLMYILAGKSLLKESNPAG*EWLIFA
Trigger: TGCAAAAATGAGCCATTCTCACCCCGCTGGGTTACT...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR TCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAACTGTCTCAAGCACTGTaGGCATCAAGGCTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQLSQAL*ASRLAF
Trigger: AAAAGCAAGCCTTGATGCTCACAGTGCTTGAGACAG...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR TCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAAATGTCTTCAGGGAAATaGAAACCCCTAGGAGACAGG +
Preference number: 4 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQMSSGK*KPLGDR
Trigger: CCTGTCTCCTAGGGGTTTTCATTTCCCTGAAGACAT...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAATCATCACTGCCTTCTTaGCCCCAATGGGAAACAGAG +
Preference number: 4 (lower is better)
Translates to: QNASVVGFPTETNPQYNQSSLPS*PQWETE
Trigger: CTCTGTTTCCCATTGGGGGCAAGAAGGCAGTGATGA...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAATGGCACTTTCATCTGTaGTGCTGTCAGTGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: QNASVVGFPTETNPQYNQWHFHL*CCQCGL
Trigger: AAGCCCACACTGACAGCAGCACAGATGAAAGTGCCA...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAACACAGCATCTTTTGCTaGTGCTTGTCCTATGGGGTC +
Preference number: 4 (lower is better)
Translates to: QNASVVGFPTETNPQYNQHSIFC*CLSYGV
Trigger: GACCCCATAGGACAAGCAGCAGCAAAAGATGCTGTG...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAAACCCACAGCATCTTTTaGTGCTGCTTGTCCTATGGG +
Preference number: 4 (lower is better)
Translates to: ASHENLMYILAGKSLLKETHSIF*CCLSYG
Trigger: CCCATAGGACAAGCAGCAGCAAAAGATGCTGTGGGT...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAACTCCAAGTTCAGGGCTaGTGCTTCATTTGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: QNASVVGFPTETNPQYNQLQVQG*CFICKH
Trigger: GTGCTTGCAAATGAAGCAGCAGCCCTGAACTTGGAG...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAAGTCTCGCTTTCTCCTTaGACCATATGCTGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQVSLSP*TICCCF
Trigger: GAAGCAACAGCATATGGTGCAAGGAGAAAGCGAGAC...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp AATGAAACTTTAATAAGGTTTCTCGGCCCTTTCTGCTATCCTCAAGTAAGTATCCCCAGTTGGGGGAAGTaGAGGAGGAATAGGCATCAT +
Preference number: 4 (lower is better)
Translates to: NETLIRFLGPFCYPQVSIPSWGK*RRNRHH
Trigger: ATGATGCCTATTCCTCCTCCACTTCCCCCAACTGGG...GATACTTACTTGAGGATAGCAGAAAGGGCCGAGAAACCTTATTAAAGTTTCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479666.1
CDS-3UTR CCA 90 bp GGAATTCCCATAGGAGGGAATTTACCGAAAATAGGAAACAGGCTGGATAGAAATTGTGATTTTCCCAGTTaGGGGAAGTGGAGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: GIPIGGNLPKIGNRLDRNCDFPS*GKWRRN
Trigger: ATTCCTCCTCCACTTCCCCCAACTGGGAAAATCACA...ATTTCTATCCAGCCTGTTTCCTATTTTCGGTAAATTCCCTCCTATGGGAATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR CCA 90 bp GTAGTTTGCCTTTGTAGACACAAAGGTTTTCCCCACCACAGTGCTGCTGATAAAATTTGGAGCAGTGGTTaGACGAAATCTTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: VVCLCRHKGFPHHSAADKIWSSG*TKSSPS
Trigger: AGAAGGAGAAGATTTCGTCCAACCACTGCTCCAAAT...TTTATCAGCAGCACTGTGGTGGGGAAAACCTTTGTGTCTACAAAGGCAAACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000479666.1
CDS-3UTR CCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAACCCTCTGCAATCTCTTaGGTTCCTTTCTCCGTTCCT +
Preference number: 4 (lower is better)
Translates to: QNASVVGFPTETNPQYNQPSAIS*VPFSVP
Trigger: AGGAACGGAGAAAGGAACCCAAGAGATTGCAGAGGG...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAACCTCAGAGATGTTTTTaGCCTCTCAGCTTTCCTTCG +
Preference number: 4 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQPQRCF*PLSFPS
Trigger: CGAAGGAAAGCTGAGAGGCCAAAAACATCTCTGAGG...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAAGAAATCAGGCTTCACTaGAAGTGTTGCCATCGCCTG +
Preference number: 4 (lower is better)
Translates to: QNASVVGFPTETNPQYNQEIRLH*KCCHRL
Trigger: CAGGCGATGGCAACACTTCCAGTGAAGCCTGATTTC...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp ACTTTAATAAGGTTTCTCGGCCCTTTCTGCTATCCTCAAGTAAGTATCAAAACCTGCCCTTGGCAAGCATaGAAAGCACCCATCCAAGTA +
Preference number: 4 (lower is better)
Translates to: TLIRFLGPFCYPQVSIKTCPWQA*KAPIQV
Trigger: TACTTGGATGGGTGCTTTCCATGCTTGCCAAGGGCA...GGTTTTGATACTTACTTGAGGATAGCAGAAAGGGCCGAGAAACCTTATTAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479666.1
CDS-3UTR TCA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAATGCCTATGGAGTTCCTaGACTTCATCACTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: ASHENLMYILAGKSLLKECLWSS*TSSLPS
Trigger: AGAAGGCAGTGATGAAGTTCAGGAACTCCATAGGCA...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR TCA 90 bp TTAATAAGGTTTCTCGGCCCTTTCTGCTATCCTCAAGTAAGTATCAAAACCTTCTGCCTATGGAGTTCCTaGACTTCATCACTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: LIRFLGPFCYPQVSIKTFCLWSS*TSSLPS
Trigger: AGAAGGCAGTGATGAAGTTCAGGAACTCCATAGGCA...GAAGGTTTTGATACTTACTTGAGGATAGCAGAAAGGGCCGAGAAACCTTATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479666.1
CDS-3UTR TCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAATTTTCACTCAGTTCCTaGGAAGATGACCTTCTGGCA +
Preference number: 4 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQFSLSS*EDDLLA
Trigger: TGCCAGAAGGTCATCTTCTCAGGAACTGAGTGAAAA...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR TCA 90 bp GGAATTCCCATAGGAGGGAATTTACCGAAAATAGGAAACAGGCTGGATAGAAATTTTTTGTCCTTCACCTaGGCAGTGCTTTCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: GIPIGGNLPKIGNRLDRNFLSFT*AVLSSQ
Trigger: TTGGGAAGAAAGCACTGCTCAGGTGAAGGACAAAAA...ATTTCTATCCAGCCTGTTTCCTATTTTCGGTAAATTCCCTCCTATGGGAATTCC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR TCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAATCTCTCGGGTTTCAGTaGAATCAGGCTTCACTGGAA +
Preference number: 4 (lower is better)
Translates to: QNASVVGFPTETNPQYNQSLGFQ*NQASLE
Trigger: TTCCAGTGAAGCCTGATTTCACTGAAACCCGAGAGA...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR TCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAACAGAACTTGGGAAGGTaGGCAGCACACTCATTTAAT +
Preference number: 4 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQQNLGR*AAHSFN
Trigger: ATTAAATGAGTGTGCTGCTCACCTTCCCAAGTTCTG...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAAACAGACCTTCTTGTGTaGTCTCCCTTAAACCTCTGG +
Preference number: 4 (lower is better)
Translates to: ASHENLMYILAGKSLLKETDLLV*SPLNLW
Trigger: CCAGAGGTTTAAGGGAGAGCACACAAGAAGGTCTGT...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAACTGGAACCTTTCCGATaGTTGTATTCACAACAGGAG +
Preference number: 4 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQLEPFR*LYSQQE
Trigger: CTCCTGTTGTGAATACAAGCATCGGAAAGGTTCCAG...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp ATTCCCATAGGAGGGAATTTACCGAAAATAGGAAACAGGCTGGATAGAAATTATCAAAGTAGCCTCGTTTaGCTCCAAGCCTGGAACCTT +
Preference number: 4 (lower is better)
Translates to: IPIGGNLPKIGNRLDRNYQSSLV*LQAWNL
Trigger: AAGGTTCCAGGCTTGGAGGCAAACGAGGCTACTTTG...ATAATTTCTATCCAGCCTGTTTCCTATTTTCGGTAAATTCCCTCCTATGGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR GCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAACCTTCACCTGAGCAGTaGTTTCTTCCCAAAGCTTAC +
Preference number: 4 (lower is better)
Translates to: QNASVVGFPTETNPQYNQPSPEQ*FLPKAY
Trigger: GTAAGCTTTGGGAAGAAAGCACTGCTCAGGTGAAGG...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAAGTGAGCATCAAGGCTTaGTTTTCAGGAGCCTCATCT +
Preference number: 4 (lower is better)
Translates to: ASHENLMYILAGKSLLKEVSIKA*FSGASS
Trigger: AGATGAGGCTCCTGAAAAGCAAGCCTTGATGCTCAC...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAATTCCCCTTCAGAAGCTaGTTTGTCTGTCTCAAGCAC +
Preference number: 4 (lower is better)
Translates to: ASHENLMYILAGKSLLKEFPFRS*FVCLKH
Trigger: GTGCTTGAGACAGACAAAGCAGCTTCTGAAGGGGAA...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAACTTCTGTCTCCAGAGTaGACTCTTTGTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: QNASVVGFPTETNPQYNQLLSPE*TLCPLP
Trigger: AGGAAGAGGACAAAGAGTGCACTCTGGAGACAGAAG...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAAGGAGGAGGCTTTATTTaGTATTGTTTTCTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQGGGFI*YCFLLG
Trigger: GCCGAGGAGAAAACAATAGCAAATAAAGCCTCCTCC...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAAAACTCATCCTGTTGGTaGCAGGTTTCTTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: ASHENLMYILAGKSLLKENSSCW*QVSSSA
Trigger: TGCTGAGGAAGAAACCTGGCACCAACAGGATGAGTT...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAATGCACCATATGCTGTTaGTTCTCTCGGGTTTCAGTG +
Preference number: 4 (lower is better)
Translates to: ASHENLMYILAGKSLLKECTICC*FSRVSV
Trigger: CACTGAAACCCGAGAGAAGCAACAGCATATGGTGCA...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAATCTCCTTGCACCATATaGTGTTGCTTCTCTCGGGTT +
Preference number: 4 (lower is better)
Translates to: QNASVVGFPTETNPQYNQSPCTI*CCFSRV
Trigger: AACCCGAGAGAAGCAACAGCATATGGTGCAAGGAGA...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAATCTCCCTTAAACCTCTaGATTCGCTCCTTCCTAGCT +
Preference number: 4 (lower is better)
Translates to: QNASVVGFPTETNPQYNQSPLNL*IRSFLA
Trigger: AGCTAGGAAGGAGCGAATCCAGAGGTTTAAGGGAGA...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAAAGGCTGCATATTTCCTaGAGCAGTATATGGTCGAGG +
Preference number: 4 (lower is better)
Translates to: QNASVVGFPTETNPQYNQRLHIS*SSIWSR
Trigger: CCTCGACCATATACTGCTCCAGGAAATATGCAGCCT...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAACCTTCTTGCCCCCAATaGGAAACAGAGCTTCATTTT +
Preference number: 4 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQPSCPQ*ETELHF
Trigger: AAAATGAAGCTCTGTTTCCCATTGGGGGCAAGAAGG...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAATGTGATTTTCCCAGTTaGGGGAAGTGGAGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: ASHENLMYILAGKSLLKECDFPS*GKWRRN
Trigger: ATTCCTCCTCCACTTCCCCCAACTGGGAAAATCACA...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp ACAGTGCTGCTGATAAACTTTAATTTCATCCCGGAAGTCAGGATTATCAGAAGATGTGATTTTCCCAGTTaGGGGAAGTGGAGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: TVLLINFNFIPEVRIIRRCDFPS*GKWRRN
Trigger: ATTCCTCCTCCACTTCCCCCAACTGGGAAAATCACA...TCTTCTGATAATCCTGACTTCCGGGATGAAATTAAAGTTTATCAGCAGCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479666.1
CDS-3UTR CCA 90 bp GTCACAGTAGTATTTCCCAAGCTTTGGCATAGTGCAATGACCAAAATCAGCTTCATTTGGAGCAGTGGTTaGACGAAATCTTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: VTVVFPKLWHSAMTKISFIWSSG*TKSSPS
Trigger: AGAAGGAGAAGATTTCGTCCAACCACTGCTCCAAAT...GAAGCTGATTTTGGTCATTGCACTATGCCAAAGCTTGGGAAATACTACTGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR CCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAAAGCCATTTGGAGCAGTaGTTGGACGAAATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: QNASVVGFPTETNPQYNQSHLEQ*LDEIFS
Trigger: GGAGAAGATTTCGTCCAACCACTGCTCCAAATGGCT...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAAGAGAAGATGACCTTCTaGCACTTTCATCTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: ASHENLMYILAGKSLLKEEKMTF*HFHLCC
Trigger: GCAGCACAGATGAAAGTGCCAGAAGGTCATCTTCTC...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAAAAAGCTTTCGTCTATTaGCATCGGCTTGGTCTCCAC +
Preference number: 4 (lower is better)
Translates to: QNASVVGFPTETNPQYNQKAFVY*HRLGLH
Trigger: GTGGAGACCAAGCCGATGCCAATAGACGAAAGCTTT...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp AAAAATCTTGAATCCCTAAAGCATTGTCACAGTAGTATTTCCCAAGCTTTGGCACCCTCTGCAATCTCTTaGGTTCCTTTCTCCGTTCCT +
Preference number: 4 (lower is better)
Translates to: KNLESLKHCHSSISQALAPSAIS*VPFSVP
Trigger: AGGAACGGAGAAAGGAACCCAAGAGATTGCAGAGGG...TGCCAAAGCTTGGGAAATACTACTGTGACAATGCTTTAGGGATTCAAGATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR CCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAAACTAACTCATCCTGTTaGTGCCAGGTTTCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQTNSSC*CQVSSS
Trigger: TGAGGAAGAAACCTGGCACCAACAGGATGAGTTAGT...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAACATATACATGCGCTCTaGGGCACTTGTATGTCTTCA +
Preference number: 4 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQHIHAL*GTCMSS
Trigger: TGAAGACATACAAGTGCCCCAGAGCGCATGTATATG...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAAGTAGGAGACAAAGGCTaGGAACAATTTCCAGGTGAT +
Preference number: 4 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQVGDKG*EQFPGD
Trigger: ATCACCTGGAAATTGTTCCCAGCCTTTGTCTCCTAC...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR TCA 90 bp AAAAATCTTGAATCCCTAAAGCATTGTCACAGTAGTATTTCCCAAGCTTTGGCATGCCTATGGAGTTCCTaGACTTCATCACTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: KNLESLKHCHSSISQALACLWSS*TSSLPS
Trigger: AGAAGGCAGTGATGAAGTTCAGGAACTCCATAGGCA...TGCCAAAGCTTGGGAAATACTACTGTGACAATGCTTTAGGGATTCAAGATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR TCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAAGGTATTCCATTCATTTaGACATCAGCCTGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQGIPFI*TSACPS
Trigger: AGAAGGACAGGCTGATGTTCAAATGAATGGAATACC...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR TCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAATTTTTGTCCTTCACCTaGGCAGTGCTTTCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: QNASVVGFPTETNPQYNQFLSFT*AVLSSQ
Trigger: TTGGGAAGAAAGCACTGCTCAGGTGAAGGACAAAAA...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR TCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAACTGGGATTCCTTGTTTaGGTTGATTGCTGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: QNASVVGFPTETNPQYNQLGFLV*VDCCCF
Trigger: GAAACAGCAGCAATCAACTCAAACAAGGAATCCCAG...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR TCA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAAAAGCATCTTCATCCTTaGGTGCATTTGCCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: ASHENLMYILAGKSLLKEKHLHP*VHLPLS
Trigger: TGACAAGGGCAAATGCACTCAAGGATGAAGATGCTT...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR TCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAAGGTGAGATGCTTGCGTaGATCTTTCTCCACTCTTTA +
Preference number: 4 (lower is better)
Translates to: QNASVVGFPTETNPQYNQGEMLA*IFLHSL
Trigger: TAAAGAGTGGAGAAAGATTCACGCAAGCATCTCACC...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR TCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAAAATCAAGAATCCTGGTaGGATGCTTGCGTGAATCTT +
Preference number: 4 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQNQESW*DACVNL
Trigger: AAGATTCACGCAAGCATCTCACCAGGATTCTTGATT...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR TCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAAAGCAATCTTGAGTTTTaGGTGTACGTGGGAGGAAAT +
Preference number: 4 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQSNLEF*VYVGGN
Trigger: ATTTCCTCCCACGTACACTCAAAACTCAAGATTGCT...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR TCA 90 bp GTAGTATTTCCCAAGCTTTGGCATAGTGCAATGACCAAAATCAGCTTCCATGCAGCTTTATTTCATTCCTaGGATGGAATTCCCATAGGA +
Preference number: 4 (lower is better)
Translates to: VVFPKLWHSAMTKISFHAALFHS*DGIPIG
Trigger: TCCTATGGGAATTCCATCTCAGGAATGAAATAAAGC...TGCATGGAAGCTGATTTTGGTCATTGCACTATGCCAAAGCTTGGGAAATACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR GCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAAAATCGAATTGGAGGCTaGATATTTCCTGGAGCAGTA +
Preference number: 4 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQNRIGG*IFPGAV
Trigger: TACTGCTCCAGGAAATATGCAGCCTCCAATTCGATT...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp GTAGTATTTCCCAAGCTTTGGCATAGTGCAATGACCAAAATCAGCTTCCATGCATTTGTCAAGGCCCATTaGAATAATGCACTTGTAGCA +
Preference number: 4 (lower is better)
Translates to: VVFPKLWHSAMTKISFHAFVKAH*NNALVA
Trigger: TGCTACAAGTGCATTATTGCAATGGGCCTTGACAAA...TGCATGGAAGCTGATTTTGGTCATTGCACTATGCCAAAGCTTGGGAAATACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR GCA 90 bp TTCCTGAGATGGAATTCCCATAGGAGGGAATTTACCGAAAATAGGAAACAGGCTCTTGGTCTCCACATCTaGTTTTGTTATTTCTTGGTC +
Preference number: 4 (lower is better)
Translates to: FLRWNSHRREFTENRKQALGLHI*FCYFLV
Trigger: GACCAAGAAATAACAAAAGCAGATGTGGAGACCAAG...AGCCTGTTTCCTATTTTCGGTAAATTCCCTCCTATGGGAATTCCATCTCAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR GCA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAATTCTGTAAACTCTTCTaGCAATTCTGGCTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: ASHENLMYILAGKSLLKEFCKLF*QFWLLC
Trigger: GCAGAGCAGCCAGAATTGGCAGAAGAGTTTACAGAA...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAATTCCCTATTAGCTTCTaGCTCAGTCACCATCTCTTC +
Preference number: 4 (lower is better)
Translates to: ASHENLMYILAGKSLLKEFPISF*LSHHLF
Trigger: GAAGAGATGGTGACTGAGGCAGAAGCTAATAGGGAA...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAAATCCTTGAGTGCATTTaGCCTTGTCACCTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: QNASVVGFPTETNPQYNQILECI*PCHLFS
Trigger: AGAGAAGAGGTGACAAGGGCAAATGCACTCAAGGAT...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAATTCAAATCCAGGCGTTaGTTCAAATATGGGAACCAC +
Preference number: 4 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQFKSRR*FKYGNH
Trigger: GTGGTTCCCATATTTGAAGCAACGCCTGGATTTGAA...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAACTCCCTGAACTTTTCTaGCATTATGGGATCTTCCTC +
Preference number: 4 (lower is better)
Translates to: ASHENLMYILAGKSLLKELPELF*HYGIFL
Trigger: GAGGAAGATCCCATAATGGCAGAAAAGTTCAGGGAG...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAAGGCAGAGGGACTTCGTaGATGTATCAATACAATCAT +
Preference number: 4 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQGRGTS*MYQYNH
Trigger: ATGATTGTATTGATACATGCACGAAGTCCCTCTGCC...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp ACAAATGAAACTTTAATAAGGTTTCTCGGCCCTTTCTGCTATCCTCAAGTAAGTAGGAACAAGGCCTCATaGCCCTGCATAACTAAAGCT +
Preference number: 4 (lower is better)
Translates to: TNETLIRFLGPFCYPQVSRNKAS*PCITKA
Trigger: AGCTTTAGTTATGCAGGGGCATGAGGCCTTGTTCCT...ACTTACTTGAGGATAGCAGAAAGGGCCGAGAAACCTTATTAAAGTTTCATTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479666.1
CDS-3UTR CCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAAGTGGGGAGACAGGATTaGCATGTTATTTTCAACAGA +
Preference number: 4 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQVGRQD*HVIFNR
Trigger: TCTGTTGAAAATAACATGCCAATCCTGTCTCCCCAC...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAATCAACCAGAACACTATaGCCACGATTACTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: ASHENLMYILAGKSLLKESTRTL*PRLLFG
Trigger: CCCAAAGAGTAATCGTGGCCATAGTGTTCTGGTTGA...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAATCAGTGCTAACGGACTaGAATGTCCTTCATCAACCA +
Preference number: 4 (lower is better)
Translates to: QNASVVGFPTETNPQYNQSVLTD*NVLHQP
Trigger: TGGTTGATGAAGGACATTCCAGTCCGTTAGCACTGA...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAACTACTGCAGGATTACTaGGAAGAGGCTGTAATCGAA +
Preference number: 4 (lower is better)
Translates to: ASHENLMYILAGKSLLKELLQDY*EEAVIE
Trigger: TTCGATTACAGCCTCTTCCCAGTAATCCTGCAGTAG...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp ATTTCATTCCTGAGATGGAATTCCCATAGGAGGGAATTTACCGAAAATAGGAAAAGCCATTTGGAGCAGTaGTTGGACGAAATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: ISFLRWNSHRREFTENRKSHLEQ*LDEIFS
Trigger: GGAGAAGATTTCGTCCAACCACTGCTCCAAATGGCT...TTTCCTATTTTCGGTAAATTCCCTCCTATGGGAATTCCATCTCAGGAATGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR CCA 90 bp AATGAAACTTTAATAAGGTTTCTCGGCCCTTTCTGCTATCCTCAAGTAAGTATCAGCCATTTGGAGCAGTaGTTGGACGAAATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: NETLIRFLGPFCYPQVSISHLEQ*LDEIFS
Trigger: GGAGAAGATTTCGTCCAACCACTGCTCCAAATGGCT...GATACTTACTTGAGGATAGCAGAAAGGGCCGAGAAACCTTATTAAAGTTTCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479666.1
CDS-3UTR CCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAACATGAAATTCATTGTTaGTGCACCAAGAGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: QNASVVGFPTETNPQYNQHEIHC*CTKSQD
Trigger: GTCCTGGCTCTTGGTGCACCAACAATGAATTTCATG...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAATGTCCTCTAGGTCTATaGATGCTTCCTCTTCACTTT +
Preference number: 4 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQCPLGL*MLPLHF
Trigger: AAAGTGAAGAGGAAGCATCCATAGACCTAGAGGACA...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAATTTTCTCTCTTTGGCTaGTTCCTCTCCCCCAAGAAT +
Preference number: 4 (lower is better)
Translates to: ASHENLMYILAGKSLLKEFSLFG*FLSPKN
Trigger: ATTCTTGGGGGAGAGGAACCAGCCAAAGAGAGAAAA...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAAAGCGGTTCTCAACCTTaGCTACAGAGAAGAATCAAG +
Preference number: 4 (lower is better)
Translates to: ASHENLMYILAGKSLLKESGSQP*LQRRIK
Trigger: CTTGATTCTTCTCTGTAGCCAAGGTTGAGAACCGCT...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR TCA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAACCTGATCTTAAGAGATaGCGCCTTATCCTTGTATTG +
Preference number: 4 (lower is better)
Translates to: ASHENLMYILAGKSLLKEPDLKR*RLILVL
Trigger: CAATACAAGGATAAGGCGTCATCTCTTAAGATCAGG...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR TCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAACTTGTAGCAAGGAGATaGTCTCTCAACACACACAAA +
Preference number: 4 (lower is better)
Translates to: QNASVVGFPTETNPQYNQLVARR*SLNTHK
Trigger: TTTGTGTGTGTTGAGAGATCATCTCCTTGCTACAAG...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR TCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAATTTATCATCCAAAGGTaGCTGCGGTATTCCATTCAT +
Preference number: 4 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQFIIQR*LRYSIH
Trigger: ATGAATGGAATACCGCAGTCACCTTTGGATGATAAA...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR TCA 90 bp AAAAATCTTGAATCCCTAAAGCATTGTCACAGTAGTATTTCCCAAGCTTTGGCATTTTCACTCAGTTCCTaGGAAGATGACCTTCTGGCA +
Preference number: 4 (lower is better)
Translates to: KNLESLKHCHSSISQALAFSLSS*EDDLLA
Trigger: TGCCAGAAGGTCATCTTCTCAGGAACTGAGTGAAAA...TGCCAAAGCTTGGGAAATACTACTGTGACAATGCTTTAGGGATTCAAGATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR TCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAATCCTCAATTGGAAGGTaGGACTTTCTTGGCTTATCA +
Preference number: 4 (lower is better)
Translates to: QNASVVGFPTETNPQYNQSSIGR*DFLGLS
Trigger: TGATAAGCCAAGAAAGTCTCACCTTCCAATTGAGGA...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR TCA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAATTCCTCAGCAACATCTaGAAAGGAGGAGGCTTTATT +
Preference number: 4 (lower is better)
Translates to: ASHENLMYILAGKSLLKEFLSNI*KGGGFI
Trigger: AATAAAGCCTCCTCCTTTTCAGATGTTGCTGAGGAA...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR TCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAATCCTACAGATCTACTTaGGCTATTCTCAAGGTGCTT +
Preference number: 4 (lower is better)
Translates to: QNASVVGFPTETNPQYNQSYRST*AILKVL
Trigger: AAGCACCTTGAGAATAGCTCAAGTAGATCTGTAGGA...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR TCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAATTGAGATTGTGGAATTaGCTGGGGCTCTGTATTGTA +
Preference number: 4 (lower is better)
Translates to: QNASVVGFPTETNPQYNQLRLWN*LGLCIV
Trigger: TACAATACAGAGCCCCAGTCAATTCCACAATCTCAA...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR TCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAAGGTCCAGTGTATTTTTaGTCATTGAATGGCTCCATT +
Preference number: 4 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQGPVYF*SLNGSI
Trigger: AATGGAGCCATTCAATGATCAAAAATACACTGGACC...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR TCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAACTTTCCTATAAGGTGTaGTGTATTCAAAGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQLSYKV*CIQSAL
Trigger: CAGAGCACTTTGAATACATCACACCTTATAGGAAAG...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR TCA 90 bp TTCCTGAGATGGAATTCCCATAGGAGGGAATTTACCGAAAATAGGAAACAGGCTCTACTCATTGGACTTTaGGTATTTCTAGTCCTAATG +
Preference number: 4 (lower is better)
Translates to: FLRWNSHRREFTENRKQALLIGL*VFLVLM
Trigger: CATTAGGACTAGAAATACTCAAAGTCCAATGAGTAG...AGCCTGTTTCCTATTTTCGGTAAATTCCCTCCTATGGGAATTCCATCTCAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR TCA 90 bp GTCACAGTAGTATTTCCCAAGCTTTGGCATAGTGCAATGACCAAAATCAGCTTCACATGTATGATTATGTaGCAAAGAGAGACACAGCAA +
Preference number: 4 (lower is better)
Translates to: VTVVFPKLWHSAMTKISFTCMIM*QRETQQ
Trigger: TTGCTGTGTCTCTCTTTGTCACATAATCATACATGT...GAAGCTGATTTTGGTCATTGCACTATGCCAAAGCTTGGGAAATACTACTGTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR GCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAACTTAACCTGTTCACCTaGATCCCATTCAGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: QNASVVGFPTETNPQYNQLNLFT*IPFRKK
Trigger: CTTTTTCCTGAATGGGATGCAGGTGAACAGGTTAAG...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp ATTTCATTCCTGAGATGGAATTCCCATAGGAGGGAATTTACCGAAAATAGGAAACTGGAACCTTTCCGATaGTTGTATTCACAACAGGAG +
Preference number: 4 (lower is better)
Translates to: ISFLRWNSHRREFTENRKLEPFR*LYSQQE
Trigger: CTCCTGTTGTGAATACAAGCATCGGAAAGGTTCCAG...TTTCCTATTTTCGGTAAATTCCCTCCTATGGGAATTCCATCTCAGGAATGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR GCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAACTTTTCCTTTTCTTCTaGAGAAACATGTTTCCCGGA +
Preference number: 4 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQLFLFF*RNMFPG
Trigger: TCCGGGAAACATGTTTCTGCAGAAGAAAAGGAAAAG...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp GGAATTCCCATAGGAGGGAATTTACCGAAAATAGGAAACAGGCTGGATAGAAATCTTTTCCTTTTCTTCTaGAGAAACATGTTTCCCGGA +
Preference number: 4 (lower is better)
Translates to: GIPIGGNLPKIGNRLDRNLFLFF*RNMFPG
Trigger: TCCGGGAAACATGTTTCTGCAGAAGAAAAGGAAAAG...ATTTCTATCCAGCCTGTTTCCTATTTTCGGTAAATTCCCTCCTATGGGAATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR GCA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAAGAAATTCATTGTTGGTaGACCAAGAGCCAGGACATA +
Preference number: 4 (lower is better)
Translates to: ASHENLMYILAGKSLLKEEIHCW*TKSQDI
Trigger: TATGTCCTGGCTCTTGGTGCACCAACAATGAATTTC...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAATTCATCTTCCTCCATTaGTTCTTTCTTCTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQFIFLH*FFLLQC
Trigger: ACACTGGAGAAGAAAGAAGCAATGGAGGAAGATGAA...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp TTAATAAGGTTTCTCGGCCCTTTCTGCTATCCTCAAGTAAGTATCAAAACCTTCTTTCTCGGCCCTTTCTaGTATCCTCAAGTAAGTATC +
Preference number: 4 (lower is better)
Translates to: LIRFLGPFCYPQVSIKTFFLGPF*YPQVSI
Trigger: GATACTTACTTGAGGATAGCAGAAAGGGCCGAGAAA...GAAGGTTTTGATACTTACTTGAGGATAGCAGAAAGGGCCGAGAAACCTTATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479666.1
CDS-3UTR CCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAAATTTGGAGCAGTGGTTaGACGAAATCTTCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: QNASVVGFPTETNPQYNQIWSSG*TKSSPS
Trigger: AGAAGGAGAAGATTTCGTCCAACCACTGCTCCAAAT...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAAAATAAGGGTGACTTCTaGATGAGGTTGATGAAGCAG +
Preference number: 4 (lower is better)
Translates to: ASHENLMYILAGKSLLKENKGDF*MRLMKQ
Trigger: CTGCTTCATCAACCTCATCCAGAAGTCACCCTTATT...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp GTAGTATTTCCCAAGCTTTGGCATAGTGCAATGACCAAAATCAGCTTCCATGCAAAGGTGAGACTTTCTTaGCTTATCATTTTCACTCAG +
Preference number: 4 (lower is better)
Translates to: VVFPKLWHSAMTKISFHAKVRLS*LIIFTQ
Trigger: CTGAGTGAAAATGATAAGCCAAGAAAGTCTCACCTT...TGCATGGAAGCTGATTTTGGTCATTGCACTATGCCAAAGCTTGGGAAATACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR CCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAATTTTGCACCAATTGCTaGGATTCCTTGTTTGAGTTG +
Preference number: 4 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQFCTNC*DSLFEL
Trigger: CAACTCAAACAAGGAATCCCAGCAATTGGTGCAAAA...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAAAGATCCCATTTCATTTaGGGGAGCTTTTGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: ASHENLMYILAGKSLLKERSHFI*GSFCLF
Trigger: GAAGAGACAAAAGCTCCCCCAAATGAAATGGGATCT...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAAGCGTTGCTTCAAATATaGGAACCACTGTCTCTTTTA +
Preference number: 4 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQALLQI*EPLSLL
Trigger: TAAAAGAGACAGTGGTTCCCATATTTGAAGCAACGC...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAAACTTTTCTGCCATTATaGGATCTTCCTCAGCAACAG +
Preference number: 4 (lower is better)
Translates to: QNASVVGFPTETNPQYNQTFLPL*DLPQQQ
Trigger: CTGTTGCTGAGGAAGATCCCATAATGGCAGAAAAGT...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp GGAATTCCCATAGGAGGGAATTTACCGAAAATAGGAAACAGGCTGGATAGAAATATTTCATTCCTGAGATaGAATTCCCATAGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: GIPIGGNLPKIGNRLDRNISFLR*NSHRRE
Trigger: TTCCCTCCTATGGGAATTCCATCTCAGGAATGAAAT...ATTTCTATCCAGCCTGTTTCCTATTTTCGGTAAATTCCCTCCTATGGGAATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR TCA 90 bp ATTCCCATAGGAGGGAATTTACCGAAAATAGGAAACAGGCTGGATAGAAATTATCTTGTAGCAAGGAGATaGTCTCTCAACACACACAAA +
Preference number: 4 (lower is better)
Translates to: IPIGGNLPKIGNRLDRNYLVARR*SLNTHK
Trigger: TTTGTGTGTGTTGAGAGATCATCTCCTTGCTACAAG...ATAATTTCTATCCAGCCTGTTTCCTATTTTCGGTAAATTCCCTCCTATGGGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR TCA 90 bp AAAAATCTTGAATCCCTAAAGCATTGTCACAGTAGTATTTCCCAAGCTTTGGCAGGTATTCCATTCATTTaGACATCAGCCTGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: KNLESLKHCHSSISQALAGIPFI*TSACPS
Trigger: AGAAGGACAGGCTGATGTTCAAATGAATGGAATACC...TGCCAAAGCTTGGGAAATACTACTGTGACAATGCTTTAGGGATTCAAGATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR TCA 90 bp AAAAATCTTGAATCCCTAAAGCATTGTCACAGTAGTATTTCCCAAGCTTTGGCATCCTCAATTGGAAGGTaGGACTTTCTTGGCTTATCA +
Preference number: 4 (lower is better)
Translates to: KNLESLKHCHSSISQALASSIGR*DFLGLS
Trigger: TGATAAGCCAAGAAAGTCTCACCTTCCAATTGAGGA...TGCCAAAGCTTGGGAAATACTACTGTGACAATGCTTTAGGGATTCAAGATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR GCA 90 bp AGGTTTCTCGGCCCTTTCTGCTATCCTCAAGTAAGTATCAAAACCTTCCATGAACTTTTTCAAGTAGTTTaGCTTTGTAGACACAAAGGT +
Preference number: 4 (lower is better)
Translates to: RFLGPFCYPQVSIKTFHELFQVV*LCRHKG
Trigger: ACCTTTGTGTCTACAAAGGCAAACTACTTGAAAAAG...TTCATGGAAGGTTTTGATACTTACTTGAGGATAGCAGAAAGGGCCGAGAAACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479666.1
CDS-3UTR GCA 90 bp ATTCCCATAGGAGGGAATTTACCGAAAATAGGAAACAGGCTGGATAGAAATTATCTTAACCTGTTCACCTaGATCCCATTCAGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: IPIGGNLPKIGNRLDRNYLNLFT*IPFRKK
Trigger: CTTTTTCCTGAATGGGATGCAGGTGAACAGGTTAAG...ATAATTTCTATCCAGCCTGTTTCCTATTTTCGGTAAATTCCCTCCTATGGGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR GCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAATTTGTCAAGGCCCATTaGAATAATGCACTTGTAGCA +
Preference number: 4 (lower is better)
Translates to: QNASVVGFPTETNPQYNQFVKAH*NNALVA
Trigger: TGCTACAAGTGCATTATTGCAATGGGCCTTGACAAA...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAACTTGGTCTCCACATCTaGTTTTGTTATTTCTTGGTC +
Preference number: 4 (lower is better)
Translates to: ASHENLMYILAGKSLLKELGLHI*FCYFLV
Trigger: GACCAAGAAATAACAAAAGCAGATGTGGAGACCAAG...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAAAAAGAAAGTTCAAAATaGCTCTGTAGTTGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQKESSK*LCSWLS
Trigger: GGAAAGCCAACTACAGAGGCATTTTGAACTTTCTTT...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAAATGAGGTTTTTGATCTaGACCTTGAAGTTACCTTTG +
Preference number: 4 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQMRFLI*TLKLPL
Trigger: CAAAGGTAACTTCAAGGTCCAGATCAAAAACCTCAT...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp GTAGTATTTCCCAAGCTTTGGCATAGTGCAATGACCAAAATCAGCTTCCATGCATTTAAAGTATTTTCCTaGTCGTCTTCCAAGACTTCT +
Preference number: 4 (lower is better)
Translates to: VVFPKLWHSAMTKISFHAFKVFS*SSSKTS
Trigger: AGAAGTCTTGGAAGACGACCAGGAAAATACTTTAAA...TGCATGGAAGCTGATTTTGGTCATTGCACTATGCCAAAGCTTGGGAAATACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR CCA 90 bp AAAAATCTTGAATCCCTAAAGCATTGTCACAGTAGTATTTCCCAAGCTTTGGCAAATAAGGGTGACTTCTaGATGAGGTTGATGAAGCAG +
Preference number: 4 (lower is better)
Translates to: KNLESLKHCHSSISQALANKGDF*MRLMKQ
Trigger: CTGCTTCATCAACCTCATCCAGAAGTCACCCTTATT...TGCCAAAGCTTGGGAAATACTACTGTGACAATGCTTTAGGGATTCAAGATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR CCA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAAAAGGTGAGACTTTCTTaGCTTATCATTTTCACTCAG +
Preference number: 4 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQKVRLS*LIIFTQ
Trigger: CTGAGTGAAAATGATAAGCCAAGAAAGTCTCACCTT...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAAGACCAGTCTACTATCTaGTCCAGTGTATTTTTGATC +
Preference number: 4 (lower is better)
Translates to: ASHENLMYILAGKSLLKEDQSTI*SSVFLI
Trigger: GATCAAAAATACACTGGACCAGATAGTAGACTGGTC...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326665.10
3UTR CAA 72 bp TCAAGGGACCAGTCTACTATCTGGTCCAGTGTATTTTaGATCATTGAATGGCTCCATTACACATTAAAATGG +
Preference number: 4 (lower is better)
Translates to: SRDQSTIWSSVF*IIEWLHYTLKW
Trigger: CCATTTTAATGTGTAATGGAGCCATTCAATGATCAAAAATACACTGGACCAGATAGTAGACTGGTCCCTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR TCA 90 bp AAAAATCTTGAATCCCTAAAGCATTGTCACAGTAGTATTTCCCAAGCTTTGGCATTTATCATCCAAAGGTaGCTGCGGTATTCCATTCAT +
Preference number: 4 (lower is better)
Translates to: KNLESLKHCHSSISQALAFIIQR*LRYSIH
Trigger: ATGAATGGAATACCGCAGTCACCTTTGGATGATAAA...TGCCAAAGCTTGGGAAATACTACTGTGACAATGCTTTAGGGATTCAAGATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR TCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAAGATGATGGAGATTTATaGTGTGCAGTGAGTAATATC +
Preference number: 4 (lower is better)
Translates to: QNASVVGFPTETNPQYNQDDGDL*CAVSNI
Trigger: GATATTACTCACTGCACATCATAAATCTCCATCATC...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAAGTGATGTATTCAAAGTaGTCTGTAGCATTGAGTTTG +
Preference number: 4 (lower is better)
Translates to: ASHENLMYILAGKSLLKEVMYSK*SVALSL
Trigger: CAAACTCAATGCTACAGAGCACTTTGAATACATCAC...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp ATTTCATTCCTGAGATGGAATTCCCATAGGAGGGAATTTACCGAAAATAGGAAATGGCAAAGTTACTGCTaGAGGATACAGAGGATTTTA +
Preference number: 4 (lower is better)
Translates to: ISFLRWNSHRREFTENRKWQSYC*RIQRIL
Trigger: TAAAATCCTCTGTATCCTCCAGCAGTAACTTTGCCA...TTTCCTATTTTCGGTAAATTCCCTCCTATGGGAATTCCATCTCAGGAATGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR GCA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAACTTTTTCAAGTAGTTTaGCTTTGTAGACACAAAGGT +
Preference number: 4 (lower is better)
Translates to: QNASVVGFPTETNPQYNQLFQVV*LCRHKG
Trigger: ACCTTTGTGTCTACAAAGGCAAACTACTTGAAAAAG...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CCA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAATTTAAAGTATTTTCCTaGTCGTCTTCCAAGACTTCT +
Preference number: 4 (lower is better)
Translates to: ASHENLMYILAGKSLLKEFKVFS*SSSKTS
Trigger: AGAAGTCTTGGAAGACGACCAGGAAAATACTTTAAA...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR GCA 90 bp ATTTCATTCCTGAGATGGAATTCCCATAGGAGGGAATTTACCGAAAATAGGAAACTTTTTCAAGTAGTTTaGCTTTGTAGACACAAAGGT +
Preference number: 4 (lower is better)
Translates to: ISFLRWNSHRREFTENRKLFQVV*LCRHKG
Trigger: ACCTTTGTGTCTACAAAGGCAAACTACTTGAAAAAG...TTTCCTATTTTCGGTAAATTCCCTCCTATGGGAATTCCATCTCAGGAATGAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR CCA 90 bp ATTCCCATAGGAGGGAATTTACCGAAAATAGGAAACAGGCTGGATAGAAATTATGGAAATCCTACTCATTaGACTTTGAGTATTTCTAGT +
Preference number: 4 (lower is better)
Translates to: IPIGGNLPKIGNRLDRNYGNPTH*TLSISS
Trigger: ACTAGAAATACTCAAAGTCCAATGAGTAGGATTTCC...ATAATTTCTATCCAGCCTGTTTCCTATTTTCGGTAAATTCCCTCCTATGGGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS TCA 90 bp CCTCCTTGCCCTTCAGCTCTCCCCTCCAGTCCTGCGCAGGAGTCGTaGTCTTTGGCTGCTAGCTCCTCTGCCTGGCCTGTGGCTGGGATC +
Preference number: 5 (lower is better)
Translates to: PPCPSALPSSPAQES*SLAASSSAWPVAGI
Trigger: GATCCCAGCCACAGGCCAGGCAGAGGAGCTAGCAGCCAAAGATCACGACTCCTGCGCAGGACTGGAGGGGAGAGCTGAAGGGCAAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000433746.2
CDS GCA 90 bp GCTTCCTTTGCAAGGCTTCCTTCCTCAGGGCTGCCCTCCGAAACCTaGATCCGGCTTGCCTCTGCCTCTCCTGTGAAGGGGCTCAAGCGT +
Preference number: 5 (lower is better)
Translates to: ASFARLPSSGLPSET*IRLASASPVKGLKR
Trigger: ACGCTTGAGCCCCTTCACAGGAGAGGCAGAGGCAAGCCGGATGCAGGTTTCGGAGGGCAGCCCTGAGGAAGGAAGCCTTGCAAAGGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000433746.2
CDS GCA 90 bp GGCTCAGCTTCAGGAGCTGCTAAGGCCCCCTCTCCATCTTGGCGGTaGCCTTCCTTCAGGGCCCTATTCTCCCTGCTGGACAGCTCTTCT +
Preference number: 5 (lower is better)
Translates to: GSASGAAKAPSPSWR*PSFRALFSLLDSSS
Trigger: AGAAGAGCTGTCCAGCAGGGAGAATAGGGCCCTGAAGGAAGGGCACCGCCAAGATGGAGAGGGGGCCTTAGCAGCTCCTGAAGCTGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000433746.2
CDS GCA 90 bp CGTCCCCTTCCGAGTTCCTGTCCTGCATCGCTTCTGTCTCCAGAGTaGACTCTTTGTCCTCTTCCTCCTCTGGGTCCTCATCCACCGCTT +
Preference number: 5 (lower is better)
Translates to: RPLPSSCPASLLSPE*TLCPLPPLGPHPPL
Trigger: AAGCGGTGGATGAGGACCCAGAGGAGGAAGAGGACAAAGAGTGCACTCTGGAGACAGAAGCGATGCAGGACAGGAACTCGGAAGGGGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000433746.2
CDS GCA 90 bp TTTCCTTCTCCTTCCATGTCCCCGTCCCCTTCCGAGTTCCTGTCCTaGATCGCTTCTGTCTCCAGAGTGCACTCTTTGTCCTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: FPSPSMSPSPSEFLS*IASVSRVHSLSSSS
Trigger: GGAGGAAGAGGACAAAGAGTGCACTCTGGAGACAGAAGCGATGCAGGACAGGAACTCGGAAGGGGACGGGGACATGGAAGGAGAAGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000433746.2
CDS TCA 90 bp TCTCCCTCCTCCGATGTCGCTGCCTCTCTCAGGGCTGCTACTTCATaGAGATGCTCCAAGTTCAGGGCTGCTGCTTCATTTGCAAGCACT +
Preference number: 5 (lower is better)
Translates to: SPSSDVAASLRAATS*RCSKFRAAASFAST
Trigger: AGTGCTTGCAAATGAAGCAGCAGCCCTGAACTTGGAGCATCTTCATGAAGTAGCAGCCCTGAGAGAGGCAGCGACATCGGAGGAGGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000433746.2
CDS GCA 90 bp GGAGGCTTTATTTGCTATTGTTTTCTCCTCGGCTGTCTCCGAACCTaGCAACACCTCCCTCTCCTCTGCGGCTGTTTCTGCCGTTTCACC +
Preference number: 5 (lower is better)
Translates to: GGFICYCFLLGCLRT*QHLPLLCGCFCRFT
Trigger: GGTGAAACGGCAGAAACAGCCGCAGAGGAGAGGGAGGTGTTGGCAGGTTCGGAGACAGCCGAGGAGAAAACAATAGCAAATAAAGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000433746.2
CDS CCA 90 bp CTGAACTTTTCTGCCATTATGGGATCTTCCTCAGCAACAGCTTCCTaGGTCCTTAGCACGACATCCACTCCTCCTTGCCCTTCAGCTCTC +
Preference number: 5 (lower is better)
Translates to: LNFSAIMGSSSATAS*VLSTTSTPPCPSAL
Trigger: GAGAGCTGAAGGGCAAGGAGGAGTGGATGTCGTGCTAAGGACCCAGGAAGCTGTTGCTGAGGAAGATCCCATAATGGCAGAAAAGTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000433746.2
CDS GCA 90 bp AACTCAACGGCCATACTTACCACCTTCCTCCAACCCAGGGAGACCTaGCTTTTTGTCCTTCACCTGAGCAGTGCTTTCTTCCCAAAGCTT +
Preference number: 5 (lower is better)
Translates to: NSTAILTTFLQPRET*LFVLHLSSAFFPKL
Trigger: AAGCTTTGGGAAGAAAGCACTGCTCAGGTGAAGGACAAAAAGGCAGGTCTCCCTGGGTTGGAGGAAGGTGGTAAGTATGGCCGTTGAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS TCA 90 bp CGCTTTCTCCTTGCACCATATGCTGTTGCTTCTCTCGGGTTTCAGTaGAATCAGGCTTCACTGGAAGTGTTGCCATCGCCTGTAGACTCT +
Preference number: 5 (lower is better)
Translates to: RFLLAPYAVASLGFQ*NQASLEVLPSPVDS
Trigger: AGAGTCTACAGGCGATGGCAACACTTCCAGTGAAGCCTGATTTCACTGAAACCCGAGAGAAGCAACAGCATATGGTGCAAGGAGAAAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000433746.2
CDS GCA 90 bp TCTACTGCAGGATTACTGGGAAGAGGCTGTAATCGAATTGGAGGCTaGATATTTCCTGGAGCAGTATATGGTCGAGGGGCTGTCAGTGCT +
Preference number: 5 (lower is better)
Translates to: STAGLLGRGCNRIGG*IFPGAVYGRGAVSA
Trigger: AGCACTGACAGCCCCTCGACCATATACTGCTCCAGGAAATATGCAGCCTCCAATTCGATTACAGCCTCTTCCCAGTAATCCTGCAGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS CCA 90 bp TTGCCTCTTCAGAACCGTCCTCTCTCTTTGATGCTGTGTCCTCCATaGGTCCTGTGTCCTCTAGGTCTATGGATGCTTCCTCTTCACTTT +
Preference number: 5 (lower is better)
Translates to: LPLQNRPLSLMLCPP*VLCPLGLWMLPLHF
Trigger: AAAGTGAAGAGGAAGCATCCATAGACCTAGAGGACACAGGACCCATGGAGGACACAGCATCAAAGAGAGAGGACGGTTCTGAAGAGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000433746.2
CDS CCA 90 bp ACCACCTTCCCTGCAGCTGCTGTTTTTCCTACTAACTCATCCTGTTaGTGCCAGGTTTCTTCCTCAGCAACATCTGAAAAGGAGGAGGCT +
Preference number: 5 (lower is better)
Translates to: TTFPAAAVFPTNSSC*CQVSSSATSEKEEA
Trigger: AGCCTCCTCCTTTTCAGATGTTGCTGAGGAAGAAACCTGGCACCAACAGGATGAGTTAGTAGGAAAAACAGCAGCTGCAGGGAAGGTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000433746.2
CDS-3UTR CAA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAAGGCTCCCACCCTCCGTaGGTATCCACAGCTTCCCTG +
Preference number: 5 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQGSHPP*VSTASL
Trigger: CAGGGAAGCTGTGGATACCAACGGAGGGTGGGAGCC...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAAGGCCCCCTCTCCATCTaGGCGGTGCCCTTCCTTCAG +
Preference number: 5 (lower is better)
Translates to: ASHENLMYILAGKSLLKEGPLSI*AVPFLQ
Trigger: CTGAAGGAAGGGCACCGCCAAGATGGAGAGGGGGCC...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS TCA 90 bp CCACCTTCCTCCAACCCAGGGAGACCTGCCTTTTTGTCCTTCACCTaGGCAGTGCTTTCTTCCCAAAGCTTACTCTTATCCTTTTCCTTT +
Preference number: 5 (lower is better)
Translates to: PPSSNPGRPAFLSFT*AVLSSQSLLLSFSF
Trigger: AAAGGAAAAGGATAAGAGTAAGCTTTGGGAAGAAAGCACTGCTCAGGTGAAGGACAAAAAGGCAGGTCTCCCTGGGTTGGAGGAAGGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000420661.6
CDS TCA 90 bp AACCCTGTTCCCCTTCAGAAGCTGCTTTGTCTGTCTCAAGCACTGTaGGCATCAAGGCTTGCTTTTCAGGAGCCTCATCTTTACTCAGAC +
Preference number: 5 (lower is better)
Translates to: NPVPLQKLLCLSQAL*ASRLAFQEPHLYSD
Trigger: GTCTGAGTAAAGATGAGGCTCCTGAAAAGCAAGCCTTGATGCTCACAGTGCTTGAGACAGACAAAGCAGCTTCTGAAGGGGAACAGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000433746.2
CDS CCA 90 bp ACCAGAACACTATGGCCACGATTACTCTTTGGGCCAACTGGTGGGTaGGGAGACAGGATTGGCATGTTATTTTCAACAGACCTTCTTGTG +
Preference number: 5 (lower is better)
Translates to: TRTLWPRLLFGPTGG*GDRIGMLFSTDLLV
Trigger: CACAAGAAGGTCTGTTGAAAATAACATGCCAATCCTGTCTCCCCACCCACCAGTTGGCCCAAAGAGTAATCGTGGCCATAGTGTTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS CCA 90 bp GGAATGTCCTTCATCAACCAGAACACTATGGCCACGATTACTCTTTaGGCCAACTGGTGGGTGGGGAGACAGGATTGGCATGTTATTTTC +
Preference number: 5 (lower is better)
Translates to: GMSFINQNTMATITL*ANWWVGRQDWHVIF
Trigger: GAAAATAACATGCCAATCCTGTCTCCCCACCCACCAGTTGGCCCAAAGAGTAATCGTGGCCATAGTGTTCTGGTTGATGAAGGACATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS CCA 90 bp TTCTTGGCTTATCATTTTCACTCAGTTCCTGAGAAGATGACCTTCTaGCACTTTCATCTGTGCTGCTGTCAGTGTGGGCTTCCCTGTCCC +
Preference number: 5 (lower is better)
Translates to: FLAYHFHSVPEKMTF*HFHLCCCQCGLPCP
Trigger: GGGACAGGGAAGCCCACACTGACAGCAGCACAGATGAAAGTGCCAGAAGGTCATCTTCTCAGGAACTGAGTGAAAATGATAAGCCAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000420661.6
CDS CCA 90 bp AGCCTCCACAGGTGCTTCGTTCTCAGCATCAGATCCCATTTCATTTaGGGGAGCTTTTGTCTCTTCCTCAGCTCTTACTTCTGTCTCTGT +
Preference number: 5 (lower is better)
Translates to: SLHRCFVLSIRSHFI*GSFCLFLSSYFCLC
Trigger: ACAGAGACAGAAGTAAGAGCTGAGGAAGAGACAAAAGCTCCCCCAAATGAAATGGGATCTGATGCTGAGAACGAAGCACCTGTGGAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000433746.2
CDS-3UTR CAA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAATTTGCAGGATCCCTTTaGGACCCCGCGGCAGGTGCG +
Preference number: 5 (lower is better)
Translates to: ASHENLMYILAGKSLLKEFAGSL*DPAAGA
Trigger: CGCACCTGCCGCGGGGTCCAAAAGGGATCCTGCAAA...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAAGGCCACGATTACTCTTaGGGCCAACTGGTGGGTGGG +
Preference number: 5 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQGHDYS*GQLVGG
Trigger: CCCACCCACCAGTTGGCCCAAAGAGTAATCGTGGCC...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAACTGGCTGCTCTGCTGTaGGCTTCCACGCCCTCAAGG +
Preference number: 5 (lower is better)
Translates to: ASHENLMYILAGKSLLKELAALL*ASTPSR
Trigger: CCTTGAGGGCGTGGAAGCCAACAGCAGAGCAGCCAG...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS CCA 90 bp TTCATCAACCAGAACACTATGGCCACGATTACTCTTTGGGCCAACTaGTGGGTGGGGAGACAGGATTGGCATGTTATTTTCAACAGACCT +
Preference number: 5 (lower is better)
Translates to: FINQNTMATITLWAN*WVGRQDWHVIFNRP
Trigger: AGGTCTGTTGAAAATAACATGCCAATCCTGTCTCCCCACCCACCAGTTGGCCCAAAGAGTAATCGTGGCCATAGTGTTCTGGTTGATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAATCCACAGCTTCCCTGTaGCTAAGGGAGGAGAGAGGC +
Preference number: 5 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQSTASL*LREERG
Trigger: GCCTCTCTCCTCCCTTAGCAACAGGGAAGCTGTGGA...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp GTCACAGTAGTATTTCCCAAGCTTTGGCATAGTGCAATGACCAAAATCAGCTTCACCCTCTGCAATCTCTaGGGTTCCTTTCTCCGTTCC +
Preference number: 5 (lower is better)
Translates to: VTVVFPKLWHSAMTKISFTLCNL*GSFLRS
Trigger: GGAACGGAGAAAGGAACCCAAGAGATTGCAGAGGGT...GAAGCTGATTTTGGTCATTGCACTATGCCAAAGCTTGGGAAATACTACTGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR CAA 90 bp AGGTTTCTCGGCCCTTTCTGCTATCCTCAAGTAAGTATCAAAACCTTCCATGAAGAGGTTCTAAGCCATTaGGAGCAGTGGTTGGACGAA +
Preference number: 5 (lower is better)
Translates to: RFLGPFCYPQVSIKTFHEEVLSH*EQWLDE
Trigger: TTCGTCCAACCACTGCTCCAAATGGCTTAGAACCTC...TTCATGGAAGGTTTTGATACTTACTTGAGGATAGCAGAAAGGGCCGAGAAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479666.1
CDS-3UTR CAA 90 bp GTAGTATTTCCCAAGCTTTGGCATAGTGCAATGACCAAAATCAGCTTCCATGCACAAAGCTTTCGTCTATaGGCATCGGCTTGGTCTCCA +
Preference number: 5 (lower is better)
Translates to: VVFPKLWHSAMTKISFHAQSFRL*ASAWSP
Trigger: TGGAGACCAAGCCGATGCCAATAGACGAAAGCTTTG...TGCATGGAAGCTGATTTTGGTCATTGCACTATGCCAAAGCTTGGGAAATACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR CAA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAAGACCCACAGCATCTTTaGCTGCTGCTTGTCCTATGG +
Preference number: 5 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQDPQHL*LLLVLW
Trigger: CCATAGGACAAGCAGCAGCAAAAGATGCTGTGGGTC...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAACCTCTCCCCCAAGAATaGCCTCTTCAGAACCGTCCT +
Preference number: 5 (lower is better)
Translates to: QNASVVGFPTETNPQYNQPLPQE*PLQNRP
Trigger: AGGACGGTTCTGAAGAGGCAATTCTTGGGGGAGAGG...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAACCTAGAAGCCCTGGATaGTCAGACAACTCAGAAGCC +
Preference number: 5 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQPRSPG*SDNSEA
Trigger: GGCTTCTGAGTTGTCTGACAATCCAGGGCTTCTAGG...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAAGCTTCACTGGAAGTGTaGCCATCGCCTGTAGACTCT +
Preference number: 5 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQASLEV*PSPVDS
Trigger: AGAGTCTACAGGCGATGGCAACACTTCCAGTGAAGC...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAATGCGCTCTGGGGCACTaGTATGTCTTCAGGGAAATG +
Preference number: 5 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQCALGH*YVFREM
Trigger: CATTTCCCTGAAGACATACAAGTGCCCCAGAGCGCA...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAATGGTCCCTAGGGACCTaGAGTGTAATGTGGCCAGCA +
Preference number: 5 (lower is better)
Translates to: ASHENLMYILAGKSLLKEWSLGT*SVMWPA
Trigger: TGCTGGCCACATTACACTCAAGGTCCCTAGGGACCA...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAATTCATCACTGCCTTCTaGCCCCCAATGGGAAACAGA +
Preference number: 5 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQFITAF*PPMGNR
Trigger: TCTGTTTCCCATTGGGGGCAAGAAGGCAGTGATGAA...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAAGAGGTTCTAAGCCATTaGGAGCAGTGGTTGGACGAA +
Preference number: 5 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQEVLSH*EQWLDE
Trigger: TTCGTCCAACCACTGCTCCAAATGGCTTAGAACCTC...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAAACCCTCTGCAATCTCTaGGGTTCCTTTCTCCGTTCC +
Preference number: 5 (lower is better)
Translates to: QNASVVGFPTETNPQYNQTLCNL*GSFLRS
Trigger: GGAACGGAGAAAGGAACCCAAGAGATTGCAGAGGGT...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAACCTTCAGAAGCTGCTTaGTCTGTCTCAAGCACTGTG +
Preference number: 5 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQPSEAA*SVSSTV
Trigger: CACAGTGCTTGAGACAGACAAAGCAGCTTCTGAAGG...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAAGGGCTGCTGCTTCATTaGCAAGCACTGCCTTCTCTA +
Preference number: 5 (lower is better)
Translates to: ASHENLMYILAGKSLLKEGLLLH*QALPSL
Trigger: TAGAGAAGGCAGTGCTTGCAAATGAAGCAGCAGCCC...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAAAACCGTCCTCTCTCTTaGATGCTGTGTCCTCCATGG +
Preference number: 5 (lower is better)
Translates to: QNASVVGFPTETNPQYNQNRPLS*MLCPPW
Trigger: CCATGGAGGACACAGCATCAAAGAGAGAGGACGGTT...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp TTTCATCCCGGAAGTCAGGATTATCAGAAGATAGGTGCACATTTTTCCCCAAATTTCATCACTGCCTTCTaGCCCTTGGCAAGCATGGAA +
Preference number: 5 (lower is better)
Translates to: FHPGSQDYQKIGAHFSPNFITAF*PLASME
Trigger: TTCCATGCTTGCCAAGGGCAAGAAGGCAGTGATGAA...ATTTGGGGAAAAATGTGCACCTATCTTCTGATAATCCTGACTTCCGGGATGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479666.1
CDS TCA 90 bp GAAGTTGATATGAATTCATTCTCTGTGAATTGCCTATGGAGTTCCTaGACTTCATCACTGCCTTCTTGCCCCCAATGGGAAACAGAGCTT +
Preference number: 5 (lower is better)
Translates to: EVDMNSFSVNCLWSS*TSSLPSCPQWETEL
Trigger: AAGCTCTGTTTCCCATTGGGGGCAAGAAGGCAGTGATGAAGTTCAGGAACTCCATAGGCAATTCACAGAGAATGAATTCATATCAACTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS TCA 90 bp GAAGTTGATATGAATTCATTCTCTGTGAATTGCCTATGGAGTTCCTaGACTTCATCACTGCCTTCTTGCCCTTGGCAAGCATGGAAAGCA +
Preference number: 5 (lower is better)
Translates to: EVDMNSFSVNCLWSS*TSSLPSCPWQAWKA
Trigger: TGCTTTCCATGCTTGCCAAGGGCAAGAAGGCAGTGATGAAGTTCAGGAACTCCATAGGCAATTCACAGAGAATGAATTCATATCAACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420661.6
ENST00000479666.1
CDS CCA 90 bp AGAGCCTGTATAGTTAGGTGTTGCCTATTTCAGATTCAGCAAGAATaGGATGCTGGCCTAAGTATCAAGGACTTACTAGGTGTGAAACCA +
Preference number: 5 (lower is better)
Translates to: RACIVRCCLFQIQQE*DAGLSIKDLLGVKP
Trigger: TGGTTTCACACCTAGTAAGTCCTTGATACTTAGGCCAGCATCCCATTCTTGCTGAATCTGAAATAGGCAACACCTAACTATACAGGCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433746.2
CDS-3UTR CAA 90 bp GGAATTCCCATAGGAGGGAATTTACCGAAAATAGGAAACAGGCTGGATAGAAATCATTTGGAGCAGTGGTaGGACGAAATCTTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: GIPIGGNLPKIGNRLDRNHLEQW*DEIFSF
Trigger: GAAGGAGAAGATTTCGTCCAACCACTGCTCCAAATG...ATTTCTATCCAGCCTGTTTCCTATTTTCGGTAAATTCCCTCCTATGGGAATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR CAA 90 bp TTCCTGAGATGGAATTCCCATAGGAGGGAATTTACCGAAAATAGGAAACAGGCTGAACCTTTCCGATGCTaGTATTCACAACAGGAGCTT +
Preference number: 5 (lower is better)
Translates to: FLRWNSHRREFTENRKQAEPFRC*YSQQEL
Trigger: AAGCTCCTGTTGTGAATACAAGCATCGGAAAGGTTC...AGCCTGTTTCCTATTTTCGGTAAATTCCCTCCTATGGGAATTCCATCTCAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR CAA 90 bp GTCACAGTAGTATTTCCCAAGCTTTGGCATAGTGCAATGACCAAAATCAGCTTCGGCAAAGACGGTTTTTaGTCAAGGCCCATTGCAATA +
Preference number: 5 (lower is better)
Translates to: VTVVFPKLWHSAMTKISFGKDGF*SRPIAI
Trigger: TATTGCAATGGGCCTTGACAAAAAACCGTCTTTGCC...GAAGCTGATTTTGGTCATTGCACTATGCCAAAGCTTGGGAAATACTACTGTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR CAA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAATTCTCATCTTTCACATaGTCACGGGCATCTGGTGCC +
Preference number: 5 (lower is better)
Translates to: QNASVVGFPTETNPQYNQFSSFT*SRASGA
Trigger: GGCACCAGATGCCCGTGACAATGTGAAAGATGAGAA...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAATCTATTGGCATCGGCTaGGTCTCCACATCTGCTTTT +
Preference number: 5 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQSIGIG*VSTSAF
Trigger: AAAAGCAGATGTGGAGACCAAGCCGATGCCAATAGA...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAACAAAGCTTTCGTCTATaGGCATCGGCTTGGTCTCCA +
Preference number: 5 (lower is better)
Translates to: QNASVVGFPTETNPQYNQQSFRL*ASAWSP
Trigger: TGGAGACCAAGCCGATGCCAATAGACGAAAGCTTTG...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAATGTGAGCATCAAGGCTaGCTTTTCAGGAGCCTCATC +
Preference number: 5 (lower is better)
Translates to: ASHENLMYILAGKSLLKECEHQG*LFRSLI
Trigger: GATGAGGCTCCTGAAAAGCAAGCCTTGATGCTCACA...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAAAAAGGAAGGCTTCCTTaGCAAGGCTTCCTTCCTCAG +
Preference number: 5 (lower is better)
Translates to: ASHENLMYILAGKSLLKEKGRLP*QGFLPQ
Trigger: CTGAGGAAGGAAGCCTTGCAAAGGAAGCCTTCCTTT...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAACATTTGGGGGAGCTTTaGTCTCTTCCTCAGCTCTTA +
Preference number: 5 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQHLGEL*SLPQLL
Trigger: TAAGAGCTGAGGAAGAGACAAAAGCTCCCCCAAATG...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAAACCAGGGCTGACAGATaGGGAATCATCTCAGACAAG +
Preference number: 5 (lower is better)
Translates to: QNASVVGFPTETNPQYNQTRADR*GIISDK
Trigger: CTTGTCTGAGATGATTCCCAATCTGTCAGCCCTGGT...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAAGAGAATGGCTCATTTTaGCAGGATCCCTTTTGGACC +
Preference number: 5 (lower is better)
Translates to: ASHENLMYILAGKSLLKEENGSF*QDPFWT
Trigger: GGTCCAAAAGGGATCCTGCAAAAATGAGCCATTCTC...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAAGAGGCTGTAATCGAATaGGAGGCTGCATATTTCCTG +
Preference number: 5 (lower is better)
Translates to: ASHENLMYILAGKSLLKEEAVIE*EAAYFL
Trigger: CAGGAAATATGCAGCCTCCAATTCGATTACAGCCTC...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp GTAGTATTTCCCAAGCTTTGGCATAGTGCAATGACCAAAATCAGCTTCCATGCATTCATTCTCTGTGAATaGCCTATGGAGTTCCTGAAC +
Preference number: 5 (lower is better)
Translates to: VVFPKLWHSAMTKISFHAFILCE*PMEFLN
Trigger: GTTCAGGAACTCCATAGGCAATTCACAGAGAATGAA...TGCATGGAAGCTGATTTTGGTCATTGCACTATGCCAAAGCTTGGGAAATACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR CAA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAACATTTGGAGCAGTGGTaGGACGAAATCTTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: QNASVVGFPTETNPQYNQHLEQW*DEIFSF
Trigger: GAAGGAGAAGATTTCGTCCAACCACTGCTCCAAATG...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp TTAATAAGGTTTCTCGGCCCTTTCTGCTATCCTCAAGTAAGTATCAAAACCTTCCATTTGGAGCAGTGGTaGGACGAAATCTTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: LIRFLGPFCYPQVSIKTFHLEQW*DEIFSF
Trigger: GAAGGAGAAGATTTCGTCCAACCACTGCTCCAAATG...GAAGGTTTTGATACTTACTTGAGGATAGCAGAAAGGGCCGAGAAACCTTATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479666.1
CDS-3UTR CAA 90 bp ATTTCATTCCTGAGATGGAATTCCCATAGGAGGGAATTTACCGAAAATAGGAAAGAGGTTCTAAGCCATTaGGAGCAGTGGTTGGACGAA +
Preference number: 5 (lower is better)
Translates to: ISFLRWNSHRREFTENRKEVLSH*EQWLDE
Trigger: TTCGTCCAACCACTGCTCCAAATGGCTTAGAACCTC...TTTCCTATTTTCGGTAAATTCCCTCCTATGGGAATTCCATCTCAGGAATGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR CAA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAAGGCAAAGACGGTTTTTaGTCAAGGCCCATTGCAATA +
Preference number: 5 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQGKDGF*SRPIAI
Trigger: TATTGCAATGGGCCTTGACAAAAAACCGTCTTTGCC...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAACTGGTTTTCCTTTACTaGTCATTTCCTCCACAGCAG +
Preference number: 5 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQLVFLY*SFPPQQ
Trigger: CTGCTGTGGAGGAAATGACAAGTAAAGGAAAACCAG...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAACGGTATTCCATTCATTaGAACATCAGCCTGTCCTTC +
Preference number: 5 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQRYSIH*NISLSF
Trigger: GAAGGACAGGCTGATGTTCAAATGAATGGAATACCG...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp ATTCCCATAGGAGGGAATTTACCGAAAATAGGAAACAGGCTGGATAGAAATTATTTCTCATCTTTCACATaGTCACGGGCATCTGGTGCC +
Preference number: 5 (lower is better)
Translates to: IPIGGNLPKIGNRLDRNYFSSFT*SRASGA
Trigger: GGCACCAGATGCCCGTGACAATGTGAAAGATGAGAA...ATAATTTCTATCCAGCCTGTTTCCTATTTTCGGTAAATTCCCTCCTATGGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR CAA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAATTGCACCATATGCTGTaGCTTCTCTCGGGTTTCAGT +
Preference number: 5 (lower is better)
Translates to: ASHENLMYILAGKSLLKELHHML*LLSGFS
Trigger: ACTGAAACCCGAGAGAAGCAACAGCATATGGTGCAA...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAAAGTCTCGCTTTCTCCTaGCACCATATGCTGTTGCTT +
Preference number: 5 (lower is better)
Translates to: QNASVVGFPTETNPQYNQSLAFS*HHMLLL
Trigger: AAGCAACAGCATATGGTGCAAGGAGAAAGCGAGACT...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAAGTCCTACAGATCTACTaGAGCTATTCTCAAGGTGCT +
Preference number: 5 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQVLQIY*SYSQGA
Trigger: AGCACCTTGAGAATAGCTCAAGTAGATCTGTAGGAC...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp AAAAATCTTGAATCCCTAAAGCATTGTCACAGTAGTATTTCCCAAGCTTTGGCATTCATCACTGCCTTCTaGCCCTTGGCAAGCATGGAA +
Preference number: 5 (lower is better)
Translates to: KNLESLKHCHSSISQALAFITAF*PLASME
Trigger: TTCCATGCTTGCCAAGGGCAAGAAGGCAGTGATGAA...TGCCAAAGCTTGGGAAATACTACTGTGACAATGCTTTAGGGATTCAAGATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS TCA 90 bp ATCCAAGTACTATCTAGGGGAGAGGAAATCCTACTCATTGGACTTTaGGTATTTCTAGTCCTAATGGCAAAGTTACTGCTGGAGGATACA +
Preference number: 5 (lower is better)
Translates to: IQVLSRGEEILLIGL*VFLVLMAKLLLEDT
Trigger: TGTATCCTCCAGCAGTAACTTTGCCATTAGGACTAGAAATACTCAAAGTCCAATGAGTAGGATTTCCTCTCCCCTAGATAGTACTTGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS GCA 90 bp AAAATTCAGTTCCATTTGAAGAACAGGAACAAGGCCTCATGCCCCTaGATAACTAAAGCTCTTCTTTCTGATTTCCTTCACCAGTTGCTT +
Preference number: 5 (lower is better)
Translates to: KIQFHLKNRNKASCP*ITKALLSDFLHQLL
Trigger: AAGCAACTGGTGAAGGAAATCAGAAAGAAGAGCTTTAGTTATGCAGGGGCATGAGGCCTTGTTCCTGTTCTTCAAATGGAACTGAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479666.1
CDS CCA 90 bp CAATGGGAAACAGAGCTTCATTTTCCAGCAATGAGGTTTTTGATCTaGACCTTGAAGTTACCTTTGGAACAGTTTCTACTGCAGGATTAC +
Preference number: 5 (lower is better)
Translates to: QWETELHFPAMRFLI*TLKLPLEQFLLQDY
Trigger: GTAATCCTGCAGTAGAAACTGTTCCAAAGGTAACTTCAAGGTCCAGATCAAAAACCTCATTGCTGGAAAATGAAGCTCTGTTTCCCATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAACGCCTTATCCTTGTATaGTTAAAATACCCAGCCAGG +
Preference number: 5 (lower is better)
Translates to: QNASVVGFPTETNPQYNQRLILV*LKYPAR
Trigger: CCTGGCTGGGTATTTTAACAATACAAGGATAAGGCG...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAAACCTTGAAGTTACCTTaGGAACAGTTTCTACTGCAG +
Preference number: 5 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQTLKLP*EQFLLQ
Trigger: CTGCAGTAGAAACTGTTCCAAAGGTAACTTCAAGGT...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAATTCATTCTCTGTGAATaGCCTATGGAGTTCCTGAAC +
Preference number: 5 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQFILCE*PMEFLN
Trigger: GTTCAGGAACTCCATAGGCAATTCACAGAGAATGAA...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp TTTCATCCCGGAAGTCAGGATTATCAGAAGATAGGTGCACATTTTTCCCCAAATTTCATTCTCTGTGAATaGCCTATGGAGTTCCTGAAC +
Preference number: 5 (lower is better)
Translates to: FHPGSQDYQKIGAHFSPNFILCE*PMEFLN
Trigger: GTTCAGGAACTCCATAGGCAATTCACAGAGAATGAA...ATTTGGGGAAAAATGTGCACCTATCTTCTGATAATCCTGACTTCCGGGATGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479666.1
CDS-3UTR CAA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAAGAACCTTTCCGATGCTaGTATTCACAACAGGAGCTT +
Preference number: 5 (lower is better)
Translates to: ASHENLMYILAGKSLLKEEPFRC*YSQQEL
Trigger: AAGCTCCTGTTGTGAATACAAGCATCGGAAAGGTTC...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp GTAGTATTTCCCAAGCTTTGGCATAGTGCAATGACCAAAATCAGCTTCCATGCAGCAGTTACCACTTCTTaGAGCCCTGTTTTTATTTCT +
Preference number: 5 (lower is better)
Translates to: VVFPKLWHSAMTKISFHAAVTTS*SPVFIS
Trigger: AGAAATAAAAACAGGGCTCAAAGAAGTGGTAACTGC...TGCATGGAAGCTGATTTTGGTCATTGCACTATGCCAAAGCTTGGGAAATACTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR CAA 90 bp AAAAATCTTGAATCCCTAAAGCATTGTCACAGTAGTATTTCCCAAGCTTTGGCATCTATTGGCATCGGCTaGGTCTCCACATCTGCTTTT +
Preference number: 5 (lower is better)
Translates to: KNLESLKHCHSSISQALASIGIG*VSTSAF
Trigger: AAAAGCAGATGTGGAGACCAAGCCGATGCCAATAGA...TGCCAAAGCTTGGGAAATACTACTGTGACAATGCTTTAGGGATTCAAGATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR CAA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAAAATTGCTGGGATTCCTaGTTTGAGTTGATTGCTGCT +
Preference number: 5 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQNCWDS*FELIAA
Trigger: AGCAGCAATCAACTCAAACAAGGAATCCCAGCAATT...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAACAGTGTATACGTTTTTaGCACCAATTGCTGGGATTC +
Preference number: 5 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQQCIRF*HQLLGF
Trigger: GAATCCCAGCAATTGGTGCAAAAAACGTATACACTG...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAACAGATCCCATTTCATTaGGGGGAGCTTTTGTCTCTT +
Preference number: 5 (lower is better)
Translates to: QNASVVGFPTETNPQYNQQIPFH*GELLSL
Trigger: AAGAGACAAAAGCTCCCCCAAATGAAATGGGATCTG...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAAATTGAGATTGTGGAATaGACTGGGGCTCTGTATTGT +
Preference number: 5 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQIEIVE*TGALYC
Trigger: ACAATACAGAGCCCCAGTCAATTCCACAATCTCAAT...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp TTCCTGAGATGGAATTCCCATAGGAGGGAATTTACCGAAAATAGGAAACAGGCTTTTAGCCAAAGACCTTaGAGTTTTCTGGTACCTTTG +
Preference number: 5 (lower is better)
Translates to: FLRWNSHRREFTENRKQAFSQRP*SFLVPL
Trigger: CAAAGGTACCAGAAAACTCAAAGGTCTTTGGCTAAA...AGCCTGTTTCCTATTTTCGGTAAATTCCCTCCTATGGGAATTCCATCTCAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR CAA 90 bp TTTCATCCCGGAAGTCAGGATTATCAGAAGATAGGTGCACATTTTTCCCCAAATGATTTCCTTCACCAGTaGCTTATGACTTTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: FHPGSQDYQKIGAHFSPNDFLHQ*LMTFLL
Trigger: GAGAAGGAAAGTCATAAGCAACTGGTGAAGGAAATC...ATTTGGGGAAAAATGTGCACCTATCTTCTGATAATCCTGACTTCCGGGATGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479666.1
CDS-3UTR CAA 90 bp AGGTTTCTCGGCCCTTTCTGCTATCCTCAAGTAAGTATCAAAACCTTCCATGAAAAAATTCAGTTCCATTaGAAGAACAGGAACAAGGCC +
Preference number: 5 (lower is better)
Translates to: RFLGPFCYPQVSIKTFHEKIQFH*KNRNKA
Trigger: GGCCTTGTTCCTGTTCTTCAAATGGAACTGAATTTT...TTCATGGAAGGTTTTGATACTTACTTGAGGATAGCAGAAAGGGCCGAGAAACCT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000479666.1
CDS GCA 90 bp TGTCAACTACTTCTGGCCATTCTATTCCATATCACATTGAGTAAATaGTTTGGCCTAAGCCAACGCCTTGGTTTATCTGTCTGTCAAAAA +
Preference number: 5 (lower is better)
Translates to: CQLLLAILFHITLSK*FGLSQRLGLSVCQK
Trigger: TTTTTGACAGACAGATAAACCAAGGCGTTGGCTTAGGCCAAAGCATTTACTCAATGTGATATGGAATAGAATGGCCAGAAGTAGTTGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614534.1
CDS-3UTR CAA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAATTCCCGGATATATTTTaGATGATCCCGCTTCATCAT +
Preference number: 5 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQFPDIF*MIPLHH
Trigger: ATGATGAAGCGGGATCATCAAAAATATATCCGGGAA...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAAGAACTTTATGAAAAATaGCCTGGGCTAAGCATTCCC +
Preference number: 5 (lower is better)
Translates to: ASHENLMYILAGKSLLKEELYEK*PGLSIP
Trigger: GGGAATGCTTAGCCCAGGCAATTTTTCATAAAGTTC...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAATTTTTGATCTGGACCTaGAAGTTACCTTTGGAACAG +
Preference number: 5 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQFLIWT*KLPLEQ
Trigger: CTGTTCCAAAGGTAACTTCAAGGTCCAGATCAAAAA...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAACCAGCAATGAGGTTTTaGATCTGGACCTTGAAGTTA +
Preference number: 5 (lower is better)
Translates to: ASHENLMYILAGKSLLKEPAMRF*IWTLKL
Trigger: TAACTTCAAGGTCCAGATCAAAAACCTCATTGCTGG...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp GGAATTCCCATAGGAGGGAATTTACCGAAAATAGGAAACAGGCTGGATAGAAATTCCTTCTTGAATCCTTaGTCAAAAGAGGTTCTAAGC +
Preference number: 5 (lower is better)
Translates to: GIPIGGNLPKIGNRLDRNSFLNP*SKEVLS
Trigger: GCTTAGAACCTCTTTTGACAAAGGATTCAAGAAGGA...ATTTCTATCCAGCCTGTTTCCTATTTTCGGTAAATTCCCTCCTATGGGAATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR CAA 90 bp GGAATTCCCATAGGAGGGAATTTACCGAAAATAGGAAACAGGCTGGATAGAAATGCTGAAACAGAGGTTTaGTTCTCCTTGATCTCATTT +
Preference number: 5 (lower is better)
Translates to: GIPIGGNLPKIGNRLDRNAETEV*FSLISF
Trigger: AAATGAGATCAAGGAGAACAAAACCTCTGTTTCAGC...ATTTCTATCCAGCCTGTTTCCTATTTTCGGTAAATTCCCTCCTATGGGAATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR CAA 90 bp ATTTCATTCCTGAGATGGAATTCCCATAGGAGGGAATTTACCGAAAATAGGAAACTGGTTTTCCTTTACTaGTCATTTCCTCCACAGCAG +
Preference number: 5 (lower is better)
Translates to: ISFLRWNSHRREFTENRKLVFLY*SFPPQQ
Trigger: CTGCTGTGGAGGAAATGACAAGTAAAGGAAAACCAG...TTTCCTATTTTCGGTAAATTCCCTCCTATGGGAATTCCATCTCAGGAATGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR CAA 90 bp ATTTCATTCCTGAGATGGAATTCCCATAGGAGGGAATTTACCGAAAATAGGAAACGGTATTCCATTCATTaGAACATCAGCCTGTCCTTC +
Preference number: 5 (lower is better)
Translates to: ISFLRWNSHRREFTENRKRYSIH*NISLSF
Trigger: GAAGGACAGGCTGATGTTCAAATGAATGGAATACCG...TTTCCTATTTTCGGTAAATTCCCTCCTATGGGAATTCCATCTCAGGAATGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR CAA 90 bp GGAATTCCCATAGGAGGGAATTTACCGAAAATAGGAAACAGGCTGGATAGAAATGACTTCTGGATGAGGTaGATGAAGCAGTTTTCATAT +
Preference number: 5 (lower is better)
Translates to: GIPIGGNLPKIGNRLDRNDFWMR*MKQFSY
Trigger: ATATGAAAACTGCTTCATCAACCTCATCCAGAAGTC...ATTTCTATCCAGCCTGTTTCCTATTTTCGGTAAATTCCCTCCTATGGGAATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR CAA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAAGAAGGTGAGACTTTCTaGGCTTATCATTTTCACTCA +
Preference number: 5 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQEGETF*AYHFHS
Trigger: TGAGTGAAAATGATAAGCCAAGAAAGTCTCACCTTC...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAACTAAGGATTCCTCAATaGGAAGGTGAGACTTTCTTG +
Preference number: 5 (lower is better)
Translates to: ASHENLMYILAGKSLLKELRIPQ*EGETFL
Trigger: CAAGAAAGTCTCACCTTCCAATTGAGGAATCCTTAG...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAATTTCAAATCCAGGCGTaGCTTCAAATATGGGAACCA +
Preference number: 5 (lower is better)
Translates to: QNASVVGFPTETNPQYNQFQIQA*LQIWEP
Trigger: TGGTTCCCATATTTGAAGCAACGCCTGGATTTGAAA...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAAAGGCTTTATTTGCTATaGTTTTCTCCTCGGCTGTCT +
Preference number: 5 (lower is better)
Translates to: ASHENLMYILAGKSLLKERLYLL*FSPRLS
Trigger: AGACAGCCGAGGAGAAAACAATAGCAAATAAAGCCT...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAATGGTCCAGTGTATTTTaGATCATTGAATGGCTCCAT +
Preference number: 5 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQWSSVF*IIEWLH
Trigger: ATGGAGCCATTCAATGATCAAAAATACACTGGACCA...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAAAAGTGCTCTGTAGCATaGAGTTTGAAATCAGGAAAC +
Preference number: 5 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQKCSVA*SLKSGN
Trigger: GTTTCCTGATTTCAAACTCAATGCTACAGAGCACTT...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS CCA 90 bp TTCTTGAATCCTTTGTCAAAAGAGGTTCTAAGCCATTTGGAGCAGTaGTTGGACGAAATCTTCTCCTTCTCCATGTTTCAGATCTATTTT +
Preference number: 5 (lower is better)
Translates to: FLNPLSKEVLSHLEQ*LDEIFSFSMFQIYF
Trigger: AAAATAGATCTGAAACATGGAGAAGGAGAAGATTTCGTCCAACCACTGCTCCAAATGGCTTAGAACCTCTTTTGACAAAGGATTCAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000420661.6
CDS-3UTR CAA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAATCCTTCTTGAATCCTTaGTCAAAAGAGGTTCTAAGC +
Preference number: 5 (lower is better)
Translates to: ASHENLMYILAGKSLLKESFLNP*SKEVLS
Trigger: GCTTAGAACCTCTTTTGACAAAGGATTCAAGAAGGA...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAAGCTGAAACAGAGGTTTaGTTCTCCTTGATCTCATTT +
Preference number: 5 (lower is better)
Translates to: ASHENLMYILAGKSLLKEAETEV*FSLISF
Trigger: AAATGAGATCAAGGAGAACAAAACCTCTGTTTCAGC...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAAGCAGTTACCACTTCTTaGAGCCCTGTTTTTATTTCT +
Preference number: 5 (lower is better)
Translates to: ASHENLMYILAGKSLLKEAVTTS*SPVFIS
Trigger: AGAAATAAAAACAGGGCTCAAAGAAGTGGTAACTGC...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp GCTATGGATTACTGGAACCCACCAAGAGTTTCTAATTTAGTAGGTAGGAGACAAAGCAGTTTTCATATCTaGTTTATCCTCTTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: AMDYWNPPRVSNLVGRRQSSFHI*FILFQF
Trigger: GAACTGGAAGAGGATAAACAAGATATGAAAACTGCT...TTGTCTCCTACCTACTAAATTAGAAACTCTTGGTGGGTTCCAGTAATCCATAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAAGACTTCTGGATGAGGTaGATGAAGCAGTTTTCATAT +
Preference number: 5 (lower is better)
Translates to: QNASVVGFPTETNPQYNQDFWMR*MKQFSY
Trigger: ATATGAAAACTGCTTCATCAACCTCATCCAGAAGTC...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp ATTTCATTCCTGAGATGGAATTCCCATAGGAGGGAATTTACCGAAAATAGGAAACTAAGGATTCCTCAATaGGAAGGTGAGACTTTCTTG +
Preference number: 5 (lower is better)
Translates to: ISFLRWNSHRREFTENRKLRIPQ*EGETFL
Trigger: CAAGAAAGTCTCACCTTCCAATTGAGGAATCCTTAG...TTTCCTATTTTCGGTAAATTCCCTCCTATGGGAATTCCATCTCAGGAATGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR CAA 90 bp CAAAATGCCTCTGTAGTTGGCTTTCCAACTGAGACTAATCCTCAATACAATCAAGAGGTTTTGTTCTCCTaGATCTCATTTCTTTTTGGT +
Preference number: 5 (lower is better)
Translates to: QNASVVGFPTETNPQYNQEVLFS*ISFLFG
Trigger: ACCAAAAAGAAATGAGATCAAGGAGAACAAAACCTC...TTGATTGTATTGAGGATTAGTCTCAGTTGGAAAGCCAACTACAGAGGCATTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp ATTCCCATAGGAGGGAATTTACCGAAAATAGGAAACAGGCTGGATAGAAATTATGAAGGTGAGACTTTCTaGGCTTATCATTTTCACTCA +
Preference number: 5 (lower is better)
Translates to: IPIGGNLPKIGNRLDRNYEGETF*AYHFHS
Trigger: TGAGTGAAAATGATAAGCCAAGAAAGTCTCACCTTC...ATAATTTCTATCCAGCCTGTTTCCTATTTTCGGTAAATTCCCTCCTATGGGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR CAA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAATCTCCACATCTGCTTTaGTTATTTCTTGGTCTTCAA +
Preference number: 5 (lower is better)
Translates to: ASHENLMYILAGKSLLKESPHLL*LFLGLQ
Trigger: TTGAAGACCAAGAAATAACAAAAGCAGATGTGGAGA...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp GCGTCCCATGAAAATCTAATGTATATTCTGGCTGGAAAATCACTGCTTAAGGAAATGCCAAGAAATCTTTaGCTGGAAGAACTTAGAGAT +
Preference number: 5 (lower is better)
Translates to: ASHENLMYILAGKSLLKEMPRNL*LEELRD
Trigger: ATCTCTAAGTTCTTCCAGCAAAAGATTTCTTGGCAT...TTCCTTAAGCAGTGATTTTCCAGCCAGAATATACATTAGATTTTCATGGGACGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS-3UTR CAA 90 bp ACAGTGCTGCTGATAAACTTTAATTTCATCCCGGAAGTCAGGATTATCAGAAGACTTCTTGAATCCATCTaGCAAAGATATAATGACCAG +
Preference number: 5 (lower is better)
Translates to: TVLLINFNFIPEVRIIRRLLESI*QRYNDQ
Trigger: CTGGTCATTATATCTTTGCAAGATGGATTCAAGAAG...TCTTCTGATAATCCTGACTTCCGGGATGAAATTAAAGTTTATCAGCAGCACTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479666.1
CDS-3UTR CAA 90 bp AAAAATCTTGAATCCCTAAAGCATTGTCACAGTAGTATTTCCCAAGCTTTGGCAGAGGTTTTGTTCTCCTaGATCTCATTTCTTTTTGGT +
Preference number: 5 (lower is better)
Translates to: KNLESLKHCHSSISQALAEVLFS*ISFLFG
Trigger: ACCAAAAAGAAATGAGATCAAGGAGAACAAAACCTC...TGCCAAAGCTTGGGAAATACTACTGTGACAATGCTTTAGGGATTCAAGATTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR CAA 90 bp ATTTCATTCCTGAGATGGAATTCCCATAGGAGGGAATTTACCGAAAATAGGAAAAGCAGTTTTCATATCTaGTTTATCCTCTTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: ISFLRWNSHRREFTENRKSSFHI*FILFQF
Trigger: GAACTGGAAGAGGATAAACAAGATATGAAAACTGCT...TTTCCTATTTTCGGTAAATTCCCTCCTATGGGAATTCCATCTCAGGAATGAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS-3UTR CAA 90 bp ATTTCATTCCTGAGATGGAATTCCCATAGGAGGGAATTTACCGAAAATAGGAAATCTCCACATCTGCTTTaGTTATTTCTTGGTCTTCAA +
Preference number: 5 (lower is better)
Translates to: ISFLRWNSHRREFTENRKSPHLL*LFLGLQ
Trigger: TTGAAGACCAAGAAATAACAAAAGCAGATGTGGAGA...TTTCCTATTTTCGGTAAATTCCCTCCTATGGGAATTCCATCTCAGGAATGAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS CCA 72 bp GTGCGCGCTGGCGCTGCGACAGTCGCGCTCGAGGGGTaGCTCCGCACCGAGGTCCCCTGTGCGCGGGCACCT +
Preference number: 6 (lower is better)
Translates to: VRAGAATVALEG*LRTEVPCARAP
Trigger: AGGTGCCCGCGCACAGGGGACCTCGGTGCGGAGCCACCCCTCGAGCGCGACTGTCGCAGCGCCAGCGCGCAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS TCA 72 bp CCTTCAGCTCTCCCCTCCAGTCCTGCGCAGGAGTCGTaGTCTTTGGCTGCTAGCTCCTCTGCCTGGCCTGTG +
Preference number: 6 (lower is better)
Translates to: PSALPSSPAQES*SLAASSSAWPV
Trigger: CACAGGCCAGGCAGAGGAGCTAGCAGCCAAAGATCACGACTCCTGCGCAGGACTGGAGGGGAGAGCTGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000433746.2
CDS GCA 72 bp GGAAGGCTTCCTTTGCAAGGCTTCCTTCCTCAGGGCTaGCCTCCGAAACCTGCATCCGGCTTGCCTCTGCCT +
Preference number: 6 (lower is better)
Translates to: GRLPLQGFLPQG*PPKPASGLPLP
Trigger: AGGCAGAGGCAAGCCGGATGCAGGTTTCGGAGGGCAGCCCTGAGGAAGGAAGCCTTGCAAAGGAAGCCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000433746.2
CDS GCA 72 bp CTCTCCCTCCTCCGATGTCGCTGCCTCTCTCAGGGCTaGTACTTCATGAAGATGCTCCAAGTTCAGGGCTGC +
Preference number: 6 (lower is better)
Translates to: LSLLRCRCLSQG*YFMKMLQVQGC
Trigger: GCAGCCCTGAACTTGGAGCATCTTCATGAAGTAGCAGCCCTGAGAGAGGCAGCGACATCGGAGGAGGGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000433746.2
CDS GCA 72 bp CCTTCCATGTCCCCGTCCCCTTCCGAGTTCCTGTCCTaGATCGCTTCTGTCTCCAGAGTGCACTCTTTGTCC +
Preference number: 6 (lower is better)
Translates to: PSMSPSPSEFLS*IASVSRVHSLS
Trigger: GGACAAAGAGTGCACTCTGGAGACAGAAGCGATGCAGGACAGGAACTCGGAAGGGGACGGGGACATGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000433746.2
CDS CAA 72 bp CTGTCCTGCATCGCTTCTGTCTCCAGAGTGCACTCTTaGTCCTCTTCCTCCTCTGGGTCCTCATCCACCGCT +
Preference number: 6 (lower is better)
Translates to: LSCIASVSRVHS*SSSSSGSSSTA
Trigger: AGCGGTGGATGAGGACCCAGAGGAGGAAGAGGACAAAGAGTGCACTCTGGAGACAGAAGCGATGCAGGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000433746.2
CDS GCA 72 bp CCGAGTTCCTGTCCTGCATCGCTTCTGTCTCCAGAGTaGACTCTTTGTCCTCTTCCTCCTCTGGGTCCTCAT +
Preference number: 6 (lower is better)
Translates to: PSSCPASLLSPE*TLCPLPPLGPH
Trigger: ATGAGGACCCAGAGGAGGAAGAGGACAAAGAGTGCACTCTGGAGACAGAAGCGATGCAGGACAGGAACTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000433746.2
CDS GCA 72 bp TCTGTCTCAGGGATGTTATCACCACTTGCCCACGTCTaGTGGCTTGCCCCTGGAGGATTAGCCTTCGGAAGT +
Preference number: 6 (lower is better)
Translates to: SVSGMLSPLAHV*WLAPGGLAFGS
Trigger: ACTTCCGAAGGCTAATCCTCCAGGGGCAAGCCAGCAGACGTGGGCAAGTGGTGATAACATCCCTGAGACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433746.2
CDS CCA 72 bp GTCTCAGGGATGTTATCACCACTTGCCCACGTCTGCTaGCTTGCCCCTGGAGGATTAGCCTTCGGAAGTAGA +
Preference number: 6 (lower is better)
Translates to: VSGMLSPLAHVC*LAPGGLAFGSR
Trigger: TCTACTTCCGAAGGCTAATCCTCCAGGGGCAAGCCAGCAGACGTGGGCAAGTGGTGATAACATCCCTGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433746.2
CDS GCA 72 bp ATTTGCTATTGTTTTCTCCTCGGCTGTCTCCGAACCTaGCAACACCTCCCTCTCCTCTGCGGCTGTTTCTGC +
Preference number: 6 (lower is better)
Translates to: ICYCFLLGCLRT*QHLPLLCGCFC
Trigger: GCAGAAACAGCCGCAGAGGAGAGGGAGGTGTTGGCAGGTTCGGAGACAGCCGAGGAGAAAACAATAGCAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000433746.2
CDS CCA 72 bp TCTGCCATTATGGGATCTTCCTCAGCAACAGCTTCCTaGGTCCTTAGCACGACATCCACTCCTCCTTGCCCT +
Preference number: 6 (lower is better)
Translates to: SAIMGSSSATAS*VLSTTSTPPCP
Trigger: AGGGCAAGGAGGAGTGGATGTCGTGCTAAGGACCCAGGAAGCTGTTGCTGAGGAAGATCCCATAATGGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000433746.2
CDS TCA 72 bp TCCGATGTCGCTGCCTCTCTCAGGGCTGCTACTTCATaGAGATGCTCCAAGTTCAGGGCTGCTGCTTCATTT +
Preference number: 6 (lower is better)
Translates to: SDVAASLRAATS*RCSKFRAAASF
Trigger: AAATGAAGCAGCAGCCCTGAACTTGGAGCATCTTCATGAAGTAGCAGCCCTGAGAGAGGCAGCGACATCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000433746.2
CDS GCA 72 bp TGGGTCCTCATCCACCGCTTCCTCCCTGAACTTTTCTaGCATTATGGGATCTTCCTCAGCAACAGCTTCCTG +
Preference number: 6 (lower is better)
Translates to: WVLIHRFLPELF*HYGIFLSNSFL
Trigger: CAGGAAGCTGTTGCTGAGGAAGATCCCATAATGGCAGAAAAGTTCAGGGAGGAAGCGGTGGATGAGGACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000433746.2
CDS GCA 72 bp GCCATACTTACCACCTTCCTCCAACCCAGGGAGACCTaGCTTTTTGTCCTTCACCTGAGCAGTGCTTTCTTC +
Preference number: 6 (lower is better)
Translates to: AILTTFLQPRET*LFVLHLSSAFF
Trigger: GAAGAAAGCACTGCTCAGGTGAAGGACAAAAAGGCAGGTCTCCCTGGGTTGGAGGAAGGTGGTAAGTATGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS CAA 72 bp CTTCATCAACCAGAACACTATGGCCACGATTACTCTTaGGGCCAACTGGTGGGTGGGGAGACAGGATTGGCA +
Preference number: 6 (lower is better)
Translates to: LHQPEHYGHDYS*GQLVGGETGLA
Trigger: TGCCAATCCTGTCTCCCCACCCACCAGTTGGCCCAAAGAGTAATCGTGGCCATAGTGTTCTGGTTGATGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS CAA 90 bp GACCTGCACGTTGTTGGGGGAAACATCTGCAGTCTCGCTTTCTCCTaGCACCATATGCTGTTGCTTCTCTCGGGTTTCAGTGAAATCAGG +
Preference number: 6 (lower is better)
Translates to: DLHVVGGNICSLAFS*HHMLLLLSGFSEIR
Trigger: CCTGATTTCACTGAAACCCGAGAGAAGCAACAGCATATGGTGCAAGGAGAAAGCGAGACTGCAGATGTTTCCCCCAACAACGTGCAGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000433746.2
CDS CCA 72 bp TTCATCAACCAGAACACTATGGCCACGATTACTCTTTaGGCCAACTGGTGGGTGGGGAGACAGGATTGGCAT +
Preference number: 6 (lower is better)
Translates to: FINQNTMATITL*ANWWVGRQDWH
Trigger: ATGCCAATCCTGTCTCCCCACCCACCAGTTGGCCCAAAGAGTAATCGTGGCCATAGTGTTCTGGTTGATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS CCA 72 bp CAGTATATGGTCGAGGGGCTGTCAGTGCTAACGGACTaGAATGTCCTTCATCAACCAGAACACTATGGCCAC +
Preference number: 6 (lower is better)
Translates to: QYMVEGLSVLTD*NVLHQPEHYGH
Trigger: GTGGCCATAGTGTTCTGGTTGATGAAGGACATTCCAGTCCGTTAGCACTGACAGCCCCTCGACCATATACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS CAA 72 bp GCCTTCTCTAAACCCTGTTCCCCTTCAGAAGCTGCTTaGTCTGTCTCAAGCACTGTGAGCATCAAGGCTTGC +
Preference number: 6 (lower is better)
Translates to: AFSKPCSPSEAA*SVSSTVSIKAC
Trigger: GCAAGCCTTGATGCTCACAGTGCTTGAGACAGACAAAGCAGCTTCTGAAGGGGAACAGGGTTTAGAGAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000433746.2
CDS CAA 90 bp GCAAGCACTGCCTTCTCTAAACCCTGTTCCCCTTCAGAAGCTGCTTaGTCTGTCTCAAGCACTGTGAGCATCAAGGCTTGCTTTTCAGGA +
Preference number: 6 (lower is better)
Translates to: ASTAFSKPCSPSEAA*SVSSTVSIKACFSG
Trigger: TCCTGAAAAGCAAGCCTTGATGCTCACAGTGCTTGAGACAGACAAAGCAGCTTCTGAAGGGGAACAGGGTTTAGAGAAGGCAGTGCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000433746.2
CDS CAA 90 bp CTGCTACTTCATGAAGATGCTCCAAGTTCAGGGCTGCTGCTTCATTaGCAAGCACTGCCTTCTCTAAACCCTGTTCCCCTTCAGAAGCTG +
Preference number: 6 (lower is better)
Translates to: LLLHEDAPSSGLLLH*QALPSLNPVPLQKL
Trigger: CAGCTTCTGAAGGGGAACAGGGTTTAGAGAAGGCAGTGCTTGCAAATGAAGCAGCAGCCCTGAACTTGGAGCATCTTCATGAAGTAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000433746.2
CDS TCA 72 bp CCCCTTCAGAAGCTGCTTTGTCTGTCTCAAGCACTGTaGGCATCAAGGCTTGCTTTTCAGGAGCCTCATCTT +
Preference number: 6 (lower is better)
Translates to: PLQKLLCLSQAL*ASRLAFQEPHL
Trigger: AAGATGAGGCTCCTGAAAAGCAAGCCTTGATGCTCACAGTGCTTGAGACAGACAAAGCAGCTTCTGAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000433746.2
CDS TCA 72 bp CTTGCACCATATGCTGTTGCTTCTCTCGGGTTTCAGTaGAATCAGGCTTCACTGGAAGTGTTGCCATCGCCT +
Preference number: 6 (lower is better)
Translates to: LAPYAVASLGFQ*NQASLEVLPSP
Trigger: AGGCGATGGCAACACTTCCAGTGAAGCCTGATTTCACTGAAACCCGAGAGAAGCAACAGCATATGGTGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000433746.2
CDS GCA 72 bp GGATTACTGGGAAGAGGCTGTAATCGAATTGGAGGCTaGATATTTCCTGGAGCAGTATATGGTCGAGGGGCT +
Preference number: 6 (lower is better)
Translates to: GLLGRGCNRIGG*IFPGAVYGRGA
Trigger: AGCCCCTCGACCATATACTGCTCCAGGAAATATGCAGCCTCCAATTCGATTACAGCCTCTTCCCAGTAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS CCA 72 bp ACTCTTTGGGCCAACTGGTGGGTGGGGAGACAGGATTaGCATGTTATTTTCAACAGACCTTCTTGTGTGCTC +
Preference number: 6 (lower is better)
Translates to: TLWANWWVGRQD*HVIFNRPSCVL
Trigger: GAGCACACAAGAAGGTCTGTTGAAAATAACATGCCAATCCTGTCTCCCCACCCACCAGTTGGCCCAAAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS CAA 72 bp CATGAAGATGCTCCAAGTTCAGGGCTGCTGCTTCATTaGCAAGCACTGCCTTCTCTAAACCCTGTTCCCCTT +
Preference number: 6 (lower is better)
Translates to: HEDAPSSGLLLH*QALPSLNPVPL
Trigger: AAGGGGAACAGGGTTTAGAGAAGGCAGTGCTTGCAAATGAAGCAGCAGCCCTGAACTTGGAGCATCTTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000433746.2
CDS CAA 90 bp GGAACCACTGTCTCTTTTAGTGAATCTTCTCCTAGAAGCCCTGGATaGTCAGACAACTCAGAAGCCTCCACAGGTGCTTCGTTCTCAGCA +
Preference number: 6 (lower is better)
Translates to: GTTVSFSESSPRSPG*SDNSEASTGASFSA
Trigger: TGCTGAGAACGAAGCACCTGTGGAGGCTTCTGAGTTGTCTGACAATCCAGGGCTTCTAGGAGAAGATTCACTAAAAGAGACAGTGGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000433746.2
CDS CAA 90 bp GCCAGGTTTCTTCCTCAGCAACATCTGAAAAGGAGGAGGCTTTATTaGCTATTGTTTTCTCCTCGGCTGTCTCCGAACCTGCCAACACCT +
Preference number: 6 (lower is better)
Translates to: ARFLPQQHLKRRRLY*LLFSPRLSPNLPTP
Trigger: AGGTGTTGGCAGGTTCGGAGACAGCCGAGGAGAAAACAATAGCAAATAAAGCCTCCTCCTTTTCAGATGTTGCTGAGGAAGAAACCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000433746.2
CDS CAA 72 bp TACTCTTTGGGCCAACTGGTGGGTGGGGAGACAGGATaGGCATGTTATTTTCAACAGACCTTCTTGTGTGCT +
Preference number: 6 (lower is better)
Translates to: YSLGQLVGGETG*ACYFQQTFLCA
Trigger: AGCACACAAGAAGGTCTGTTGAAAATAACATGCCAATCCTGTCTCCCCACCCACCAGTTGGCCCAAAGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS CAA 72 bp TGCTTTGTCTGTCTCAAGCACTGTGAGCATCAAGGCTaGCTTTTCAGGAGCCTCATCTTTACTCAGACCCAC +
Preference number: 6 (lower is better)
Translates to: CFVCLKHCEHQG*LFRSLIFTQTH
Trigger: GTGGGTCTGAGTAAAGATGAGGCTCCTGAAAAGCAAGCCTTGATGCTCACAGTGCTTGAGACAGACAAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000433746.2
CDS CAA 72 bp GTCTCTTTTAGTGAATCTTCTCCTAGAAGCCCTGGATaGTCAGACAACTCAGAAGCCTCCACAGGTGCTTCG +
Preference number: 6 (lower is better)
Translates to: VSFSESSPRSPG*SDNSEASTGAS
Trigger: CGAAGCACCTGTGGAGGCTTCTGAGTTGTCTGACAATCCAGGGCTTCTAGGAGAAGATTCACTAAAAGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000433746.2
CDS CAA 72 bp ATCTGCAGTCTCGCTTTCTCCTTGCACCATATGCTGTaGCTTCTCTCGGGTTTCAGTGAAATCAGGCTTCAC +
Preference number: 6 (lower is better)
Translates to: ICSLAFSLHHML*LLSGFSEIRLH
Trigger: GTGAAGCCTGATTTCACTGAAACCCGAGAGAAGCAACAGCATATGGTGCAAGGAGAAAGCGAGACTGCAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000433746.2
CDS CAA 72 bp ATGGAGTTCCTGAACTTCATCACTGCCTTCTTGCCCTaGGCAAGCATGGAAAGCACCCATCCAAGTACTATC +
Preference number: 6 (lower is better)
Translates to: MEFLNFITAFLP*ASMESTHPSTI
Trigger: GATAGTACTTGGATGGGTGCTTTCCATGCTTGCCAAGGGCAAGAAGGCAGTGATGAAGTTCAGGAACTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420661.6
ENST00000479666.1
CDS CAA 90 bp TGGAATGTCCTTCATCAACCAGAACACTATGGCCACGATTACTCTTaGGGCCAACTGGTGGGTGGGGAGACAGGATTGGCATGTTATTTT +
Preference number: 6 (lower is better)
Translates to: WNVLHQPEHYGHDYS*GQLVGGETGLACYF
Trigger: AAAATAACATGCCAATCCTGTCTCCCCACCCACCAGTTGGCCCAAAGAGTAATCGTGGCCATAGTGTTCTGGTTGATGAAGGACATTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS CAA 90 bp TTTCTTCCTCAGCAACATCTGAAAAGGAGGAGGCTTTATTTGCTATaGTTTTCTCCTCGGCTGTCTCCGAACCTGCCAACACCTCCCTCT +
Preference number: 6 (lower is better)
Translates to: FLPQQHLKRRRLYLL*FSPRLSPNLPTPPS
Trigger: AGAGGGAGGTGTTGGCAGGTTCGGAGACAGCCGAGGAGAAAACAATAGCAAATAAAGCCTCCTCCTTTTCAGATGTTGCTGAGGAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000433746.2
CDS CAA 90 bp TCTTCCAGTTCACTCTCAGAGCATCCATCATTCTCATCTTTCACATaGTCACGGGCATCTGGTGCCTTCTGTGATGAGGTTTCACTCTCT +
Preference number: 6 (lower is better)
Translates to: SSSSLSEHPSFSSFT*SRASGAFCDEVSLS
Trigger: AGAGAGTGAAACCTCATCACAGAAGGCACCAGATGCCCGTGACAATGTGAAAGATGAGAATGATGGATGCTCTGAGAGTGAACTGGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000420661.6
CDS CAA 90 bp TTCAGAAGCTGCTTTGTCTGTCTCAAGCACTGTGAGCATCAAGGCTaGCTTTTCAGGAGCCTCATCTTTACTCAGACCCACAGCATCTTT +
Preference number: 6 (lower is better)
Translates to: FRSCFVCLKHCEHQG*LFRSLIFTQTHSIF
Trigger: AAAGATGCTGTGGGTCTGAGTAAAGATGAGGCTCCTGAAAAGCAAGCCTTGATGCTCACAGTGCTTGAGACAGACAAAGCAGCTTCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000433746.2
CDS CAA 90 bp GTGCTTCGTTCTCAGCATCAGATCCCATTTCATTTGGGGGAGCTTTaGTCTCTTCCTCAGCTCTTACTTCTGTCTCTGTTTCCCCTTCTT +
Preference number: 6 (lower is better)
Translates to: VLRSQHQIPFHLGEL*SLPQLLLLSLFPLL
Trigger: AAGAAGGGGAAACAGAGACAGAAGTAAGAGCTGAGGAAGAGACAAAAGCTCCCCCAAATGAAATGGGATCTGATGCTGAGAACGAAGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000433746.2
CDS CCA 72 bp CCTGCAGCTGCTGTTTTTCCTACTAACTCATCCTGTTaGTGCCAGGTTTCTTCCTCAGCAACATCTGAAAAG +
Preference number: 6 (lower is better)
Translates to: PAAAVFPTNSSC*CQVSSSATSEK
Trigger: CTTTTCAGATGTTGCTGAGGAAGAAACCTGGCACCAACAGGATGAGTTAGTAGGAAAAACAGCAGCTGCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000433746.2
CDS CAA 72 bp CTACTGCAGGATTACTGGGAAGAGGCTGTAATCGAATaGGAGGCTGCATATTTCCTGGAGCAGTATATGGTC +
Preference number: 6 (lower is better)
Translates to: LLQDYWEEAVIE*EAAYFLEQYMV
Trigger: GACCATATACTGCTCCAGGAAATATGCAGCCTCCAATTCGATTACAGCCTCTTCCCAGTAATCCTGCAGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS CAA 72 bp CAGCAACATCTGAAAAGGAGGAGGCTTTATTTGCTATaGTTTTCTCCTCGGCTGTCTCCGAACCTGCCAACA +
Preference number: 6 (lower is better)
Translates to: QQHLKRRRLYLL*FSPRLSPNLPT
Trigger: TGTTGGCAGGTTCGGAGACAGCCGAGGAGAAAACAATAGCAAATAAAGCCTCCTCCTTTTCAGATGTTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000433746.2
CDS TCA 72 bp TGCTGGAGGATACAGAGGATTTTAGCCAAAGACCTTTaGGTTTTCTGGTACCTTTGGCTAGCCCATTCCCAA +
Preference number: 6 (lower is better)
Translates to: CWRIQRILAKDL*VFWYLWLAHSQ
Trigger: TTGGGAATGGGCTAGCCAAAGGTACCAGAAAACTCAAAGGTCTTTGGCTAAAATCCTCTGTATCCTCCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420661.6
CDS CAA 90 bp CTTAGGGCCTGTCAACTACTTCTGGCCATTCTATTCCATATCACATaGAGTAAATGCTTTGGCCTAAGCCAACGCCTTGGTTTATCTGTC +
Preference number: 6 (lower is better)
Translates to: LRACQLLLAILFHIT*SKCFGLSQRLGLSV
Trigger: GACAGATAAACCAAGGCGTTGGCTTAGGCCAAAGCATTTACTCAATGTGATATGGAATAGAATGGCCAGAAGTAGTTGACAGGCCCTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614534.1
CDS TCA 72 bp ATGAATTCATTCTCTGTGAATTGCCTATGGAGTTCCTaGACTTCATCACTGCCTTCTTGCCCCCAATGGGAA +
Preference number: 6 (lower is better)
Translates to: MNSFSVNCLWSS*TSSLPSCPQWE
Trigger: TTCCCATTGGGGGCAAGAAGGCAGTGATGAAGTTCAGGAACTCCATAGGCAATTCACAGAGAATGAATTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS CCA 72 bp CCTTTGTCAAAAGAGGTTCTAAGCCATTTGGAGCAGTaGTTGGACGAAATCTTCTCCTTCTCCATGTTTCAG +
Preference number: 6 (lower is better)
Translates to: PLSKEVLSHLEQ*LDEIFSFSMFQ
Trigger: CTGAAACATGGAGAAGGAGAAGATTTCGTCCAACCACTGCTCCAAATGGCTTAGAACCTCTTTTGACAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000420661.6
CDS CCA 72 bp GCTTTGTCAAAAGAGGTTCTAAGCCATTTGGAGCAGTaGTTGGACGAAATCTTCTCCTTCTCCATGTTTCAG +
Preference number: 6 (lower is better)
Translates to: ALSKEVLSHLEQ*LDEIFSFSMFQ
Trigger: CTGAAACATGGAGAAGGAGAAGATTTCGTCCAACCACTGCTCCAAATGGCTTAGAACCTCTTTTGACAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479666.1
CDS CAA 72 bp TCTCAGCATCAGATCCCATTTCATTTGGGGGAGCTTTaGTCTCTTCCTCAGCTCTTACTTCTGTCTCTGTTT +
Preference number: 6 (lower is better)
Translates to: SQHQIPFHLGEL*SLPQLLLLSLF
Trigger: AAACAGAGACAGAAGTAAGAGCTGAGGAAGAGACAAAAGCTCCCCCAAATGAAATGGGATCTGATGCTGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000433746.2
CDS CAA 90 bp TTGTCACCTCTTCTCTCTCAGAGTCAGTTTTCCTCAGAGATGTTTTaGGCCTCTCAGCTTTCCTTCGCTCTCTTGCTAAATCTAATTCCT +
Preference number: 6 (lower is better)
Translates to: LSPLLSQSQFSSEMF*ASQLSFALLLNLIP
Trigger: AGGAATTAGATTTAGCAAGAGAGCGAAGGAAAGCTGAGAGGCCAAAAACATCTCTGAGGAAAACTGACTCTGAGAGAGAAGAGGTGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000433746.2
CDS GCA 72 bp TTCCATTTGAAGAACAGGAACAAGGCCTCATGCCCCTaGATAACTAAAGCTCTTCTTTCTGATTTCCTTCAC +
Preference number: 6 (lower is better)
Translates to: FHLKNRNKASCP*ITKALLSDFLH
Trigger: GTGAAGGAAATCAGAAAGAAGAGCTTTAGTTATGCAGGGGCATGAGGCCTTGTTCCTGTTCTTCAAATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479666.1
CDS GCA 72 bp CTTCTGGCCATTCTATTCCATATCACATTGAGTAAATaGTTTGGCCTAAGCCAACGCCTTGGTTTATCTGTC +
Preference number: 6 (lower is better)
Translates to: LLAILFHITLSK*FGLSQRLGLSV
Trigger: GACAGATAAACCAAGGCGTTGGCTTAGGCCAAAGCATTTACTCAATGTGATATGGAATAGAATGGCCAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614534.1
CDS CAA 72 bp TTGTCAAAAGAGGTTCTAAGCCATTTGGAGCAGTGGTaGGACGAAATCTTCTCCTTCTCCATGTTTCAGATC +
Preference number: 6 (lower is better)
Translates to: LSKEVLSHLEQW*DEIFSFSMFQI
Trigger: GATCTGAAACATGGAGAAGGAGAAGATTTCGTCCAACCACTGCTCCAAATGGCTTAGAACCTCTTTTGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326665.10
ENST00000420661.6
ENST00000479666.1
CDS CAA 72 bp TTCTTGAATCCTTTGTCAAAAGAGGTTCTAAGCCATTaGGAGCAGTGGTTGGACGAAATCTTCTCCTTCTCC +
Preference number: 6 (lower is better)
Translates to: FLNPLSKEVLSH*EQWLDEIFSFS
Trigger: GGAGAAGGAGAAGATTTCGTCCAACCACTGCTCCAAATGGCTTAGAACCTCTTTTGACAAAGGATTCAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000420661.6
CDS CAA 72 bp TGTCAACTACTTCTGGCCATTCTATTCCATATCACATaGAGTAAATGCTTTGGCCTAAGCCAACGCCTTGGT +
Preference number: 6 (lower is better)
Translates to: CQLLLAILFHIT*SKCFGLSQRLG
Trigger: ACCAAGGCGTTGGCTTAGGCCAAAGCATTTACTCAATGTGATATGGAATAGAATGGCCAGAAGTAGTTGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614534.1
CDS TCA 72 bp CTTCCACTTCTTGTGATCAGTCCTGATCTTAAGAGATaGCGCCTTATCCTTGTATTGTTAAAATACCCAGCC +
Preference number: 6 (lower is better)
Translates to: LPLLVISPDLKR*RLILVLLKYPA
Trigger: GGCTGGGTATTTTAACAATACAAGGATAAGGCGTCATCTCTTAAGATCAGGACTGATCACAAGAAGTGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS GCA 72 bp CTCTTCTTTAAAAGCATCTTCATCCTTGAGTGCATTTaGCCTTGTCACCTCTTCTCTCTCAGAGTCAGTTTT +
Preference number: 6 (lower is better)
Translates to: LFFKSIFILECI*PCHLFSLRVSF
Trigger: AAAACTGACTCTGAGAGAGAAGAGGTGACAAGGGCAAATGCACTCAAGGATGAAGATGCTTTTAAAGAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000433746.2
CDS CCA 72 bp ATAGTTAGGTGTTGCCTATTTCAGATTCAGCAAGAATaGGATGCTGGCCTAAGTATCAAGGACTTACTAGGT +
Preference number: 6 (lower is better)
Translates to: IVRCCLFQIQQE*DAGLSIKDLLG
Trigger: ACCTAGTAAGTCCTTGATACTTAGGCCAGCATCCCATTCTTGCTGAATCTGAAATAGGCAACACCTAACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433746.2
CDS CAA 72 bp AGAACATTCTCAAAGCTTTCGTCTATTGGCATCGGCTaGGTCTCCACATCTGCTTTTGTTATTTCTTGGTCT +
Preference number: 6 (lower is better)
Translates to: RTFSKLSSIGIG*VSTSAFVISWS
Trigger: AGACCAAGAAATAACAAAAGCAGATGTGGAGACCAAGCCGATGCCAATAGACGAAAGCTTTGAGAATGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000420661.6
CDS CAA 90 bp TTTGGCCTCTCAGCTTTCCTTCGCTCTCTTGCTAAATCTAATTCCTaGGGTAAAATTTCTTTCCTATCATCTTCCCTATTAGCTTCTGCC +
Preference number: 6 (lower is better)
Translates to: FGLSAFLRSLAKSNS*GKISFLSSSLLASA
Trigger: GGCAGAAGCTAATAGGGAAGATGATAGGAAAGAAATTTTACCCAAGGAATTAGATTTAGCAAGAGAGCGAAGGAAAGCTGAGAGGCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000433746.2
CDS CAA 90 bp TTTCAAGCTGATGGTAACGCTCCATATCAAGAACTTTATGAAAAATaGCCTGGGCTAAGCATTCCCGGATATATTTTTGATGATCCCGCT +
Preference number: 6 (lower is better)
Translates to: FQADGNAPYQELYEK*PGLSIPGYIFDDPA
Trigger: AGCGGGATCATCAAAAATATATCCGGGAATGCTTAGCCCAGGCAATTTTTCATAAAGTTCTTGATATGGAGCGTTACCATCAGCTTGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS CAA 90 bp TTGAATCCTTTGTCAAAAGAGGTTCTAAGCCATTTGGAGCAGTGGTaGGACGAAATCTTCTCCTTCTCCATGTTTCAGATCTATTTTCTC +
Preference number: 6 (lower is better)
Translates to: LNPLSKEVLSHLEQW*DEIFSFSMFQIYFL
Trigger: GAGAAAATAGATCTGAAACATGGAGAAGGAGAAGATTTCGTCCAACCACTGCTCCAAATGGCTTAGAACCTCTTTTGACAAAGGATTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000420661.6
CDS CCA 72 bp ACAGAGCTTCATTTTCCAGCAATGAGGTTTTTGATCTaGACCTTGAAGTTACCTTTGGAACAGTTTCTACTG +
Preference number: 6 (lower is better)
Translates to: TELHFPAMRFLI*TLKLPLEQFLL
Trigger: CAGTAGAAACTGTTCCAAAGGTAACTTCAAGGTCCAGATCAAAAACCTCATTGCTGGAAAATGAAGCTCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS CCA 72 bp TCCTTCTTTAAGAACATTCTCAAAGCTTTCGTCTATTaGCATCGGCTTGGTCTCCACATCTGCTTTTGTTAT +
Preference number: 6 (lower is better)
Translates to: SFFKNILKAFVY*HRLGLHICFCY
Trigger: ATAACAAAAGCAGATGTGGAGACCAAGCCGATGCCAATAGACGAAAGCTTTGAGAATGTTCTTAAAGAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000420661.6
CDS CAA 72 bp CTTCATTTTCCAGCAATGAGGTTTTTGATCTGGACCTaGAAGTTACCTTTGGAACAGTTTCTACTGCAGGAT +
Preference number: 6 (lower is better)
Translates to: LHFPAMRFLIWT*KLPLEQFLLQD
Trigger: ATCCTGCAGTAGAAACTGTTCCAAAGGTAACTTCAAGGTCCAGATCAAAAACCTCATTGCTGGAAAATGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS CAA 72 bp TGGGAAACAGAGCTTCATTTTCCAGCAATGAGGTTTTaGATCTGGACCTTGAAGTTACCTTTGGAACAGTTT +
Preference number: 6 (lower is better)
Translates to: WETELHFPAMRF*IWTLKLPLEQF
Trigger: AAACTGTTCCAAAGGTAACTTCAAGGTCCAGATCAAAAACCTCATTGCTGGAAAATGAAGCTCTGTTTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326665.10
CDS CAA 90 bp CAATTTCAATTTCTAAGGATTCCTCAATTGGAAGGTGAGACTTTCTaGGCTTATCATTTTCACTCAGTTCCTGAGAAGATGACCTTCTGG +
Preference number: 6 (lower is better)
Translates to: QFQFLRIPQLEGETF*AYHFHSVPEKMTFW
Trigger: CCAGAAGGTCATCTTCTCAGGAACTGAGTGAAAATGATAAGCCAAGAAAGTCTCACCTTCCAATTGAGGAATCCTTAGAAATTGAAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000420661.6
CDS CAA 90 bp CCTTCTTTAAGAACATTCTCAAAGCTTTCGTCTATTGGCATCGGCTaGGTCTCCACATCTGCTTTTGTTATTTCTTGGTCTTCAATTTCA +
Preference number: 6 (lower is better)
Translates to: PSLRTFSKLSSIGIG*VSTSAFVISWSSIS
Trigger: TGAAATTGAAGACCAAGAAATAACAAAAGCAGATGTGGAGACCAAGCCGATGCCAATAGACGAAAGCTTTGAGAATGTTCTTAAAGAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000420661.6
CDS TCA 72 bp TCAATTTCAATTTCTAAGGATTCCTCAATTGGAAGGTaGGACTTTCTTGGCTTATCATTTTCACTCAGTTCC +
Preference number: 6 (lower is better)
Translates to: SISISKDSSIGR*DFLGLSFSLSS
Trigger: GGAACTGAGTGAAAATGATAAGCCAAGAAAGTCTCACCTTCCAATTGAGGAATCCTTAGAAATTGAAATTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000420661.6
CDS CAA 72 bp TCAGCTTTCCTTCGCTCTCTTGCTAAATCTAATTCCTaGGGTAAAATTTCTTTCCTATCATCTTCCCTATTA +
Preference number: 6 (lower is better)
Translates to: SAFLRSLAKSNS*GKISFLSSSLL
Trigger: TAATAGGGAAGATGATAGGAAAGAAATTTTACCCAAGGAATTAGATTTAGCAAGAGAGCGAAGGAAAGCTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326665.10
ENST00000433746.2