RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ERICH1 (Homo sapiens)

Ensembl gene IDs: ENSG00000104714, ENSG00000282665

Ensembl transcript IDs: ENST00000262109.8, ENST00000518277.1, ENST00000518895.1, ENST00000519909.1, ENST00000522706.5, ENST00000522893.1, ENST00000523053.1, ENST00000523415.5, ENST00000523709.1, ENST00000524138.5, ENST00000632053.1, ENST00000633278.1

Found 669 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTTCCTGCTGGGGCCCCTCCTCTCTCTTCCGTCGCCCGCGGGCCCTaGTTCCTCCTCCAGTGTCGTTTCTCATGGTCCCTGGTCACGCTC +
Preference number: 1 (lower is better)
Translates to: LPAGAPPLSSVARGP*FLLQCRFSWSLVTL
Trigger: GAGCGTGACCAGGGACCATGAGAAACGACACTGGAGGAGGAAGCAGGGCCCGCGGGCGACGGAAGAGAGAGGAGGGGCCCCAGCAGGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR GCA 90 bp TCCTGTCGGCCAGGTGTGGGCGGCCGCCGTCCAGAGAGAAACTCCTaGCACGTGTGTGAGGCTGACCGAACCCCGCACACCCCATGCTCT +
Preference number: 1 (lower is better)
Translates to: SCRPGVGGRRPERNS*HVCEADRTPHTPCS
Trigger: AGAGCATGGGGTGTGCGGGGTTCGGTCAGCCTCACACACGTGGCAGGAGTTTCTCTCTGGACGGCGGCCGCCCACACCTGGCCGACAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR GCA 90 bp CCTTCCAGGGCCAGCTGGGACCCTCTGGAACCCCAACCCGAGCTGTaGCGTGGAGGAGGAAAGCACAGCTTGGCCTGGTACTCACCAAGC +
Preference number: 1 (lower is better)
Translates to: PSRASWDPLEPQPEL*RGGGKHSLAWYSPS
Trigger: GCTTGGTGAGTACCAGGCCAAGCTGTGCTTTCCTCCTCCACGGCACAGCTCGGGTTGGGGTTCCAGAGGGTCCCAGCTGGCCCTGGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR CCA 90 bp GACCTGGTCCTCCCAGTGCCTCACCGGCCACTCGGCAGCTCCCACTaGTTCTACCTCCATGGTCCACCTGGACGTTGGCTACAGCTGCCT +
Preference number: 1 (lower is better)
Translates to: DLVLPVPHRPLGSSH*FYLHGPPGRWLQLP
Trigger: AGGCAGCTGTAGCCAACGTCCAGGTGGACCATGGAGGTAGAACCAGTGGGAGCTGCCGAGTGGCCGGTGAGGCACTGGGAGGACCAGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR CCA 90 bp GGCCTTATGGCCCTCTTGAGCCTCAGCTGGAACCTGAGGTCTGACTaGCACCTGCATAGCTGCCCAGCACTGCGCTCTGGGCAGGGCCTC +
Preference number: 1 (lower is better)
Translates to: GLMALLSLSWNLRSD*HLHSCPALRSGQGL
Trigger: GAGGCCCTGCCCAGAGCGCAGTGCTGGGCAGCTATGCAGGTGCCAGTCAGACCTCAGGTTCCAGCTGAGGCTCAAGAGGGCCATAAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR CCA 90 bp TCCGTCGCCCGCGGGCCCTGCTTCCTCCTCCAGTGTCGTTTCTCATaGTCCCTGGTCACGCTCCTGGTGGGCATCTGTACTCACTGTCCC +
Preference number: 1 (lower is better)
Translates to: SVARGPCFLLQCRFS*SLVTLLVGICTHCP
Trigger: GGGACAGTGAGTACAGATGCCCACCAGGAGCGTGACCAGGGACCATGAGAAACGACACTGGAGGAGGAAGCAGGGCCCGCGGGCGACGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR TCA 90 bp GCAGGACAAGCATGGGGCAAGAGGGACGCGTTAACTGAAAGTTGCTaGAGACAGGCTCCTGTCGGCCAGGTGTGGGCGGCCGCCGTCCAG +
Preference number: 1 (lower is better)
Translates to: AGQAWGKRDALTESC*RQAPVGQVWAAAVQ
Trigger: CTGGACGGCGGCCGCCCACACCTGGCCGACAGGAGCCTGTCTTCAGCAACTTTCAGTTAACGCGTCCCTCTTGCCCCATGCTTGTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR GCA 90 bp CGGATGAGGGCGTTCTGCATGAAGGCAGCTCCTCCAGCACCCATATaGTCTGCACGCTGTGACTCCAGCCTTGTGGTCCCTGCAGCCCCC +
Preference number: 1 (lower is better)
Translates to: RMRAFCMKAAPPAPI*SARCDSSLVVPAAP
Trigger: GGGGGCTGCAGGGACCACAAGGCTGGAGTCACAGCGTGCAGAGCATATGGGTGCTGGAGGAGCTGCCTTCATGCAGAACGCCCTCATCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR CCA 90 bp CTTGCTGTAAGAGGCCTGACAACCCACCAGAAACAGATGCCCGCCTaGGGCCAACGCCGCCCTCTCCGCACACACAGGTGCCTTCTCAGG +
Preference number: 1 (lower is better)
Translates to: LAVRGLTTHQKQMPA*GQRRPLRTHRCLLR
Trigger: CCTGAGAAGGCACCTGTGTGTGCGGAGAGGGCGGCGTTGGCCCCAGGCGGGCATCTGTTTCTGGTGGGTTGTCAGGCCTCTTACAGCAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR GCA 90 bp CTCCCATGTGCCTGGCCCTGTCACCTCTTCACCTTCTCCACCTTCTaGAACTCACATCCATCCCCTGGTCCAGCCACCGGGCTCCTCGCA +
Preference number: 1 (lower is better)
Translates to: LPCAWPCHLFTFSTF*NSHPSPGPATGLLA
Trigger: TGCGAGGAGCCCGGTGGCTGGACCAGGGGATGGATGTGAGTTGCAGAAGGTGGAGAAGGTGAAGAGGTGACAGGGCCAGGCACATGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR GCA 90 bp CCCACTGGTTCTACCTCCATGGTCCACCTGGACGTTGGCTACAGCTaGCTAACCTGTGGCTGCACCTTGGTCCACGCTGCAGGCCCCTCT +
Preference number: 1 (lower is better)
Translates to: PTGSTSMVHLDVGYS*LTCGCTLVHAAGPS
Trigger: AGAGGGGCCTGCAGCGTGGACCAAGGTGCAGCCACAGGTTAGGCAGCTGTAGCCAACGTCCAGGTGGACCATGGAGGTAGAACCAGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR CCA 90 bp CTCGGCAGCTCCCACTGGTTCTACCTCCATGGTCCACCTGGACGTTaGCTACAGCTGCCTAACCTGTGGCTGCACCTTGGTCCACGCTGC +
Preference number: 1 (lower is better)
Translates to: LGSSHWFYLHGPPGR*LQLPNLWLHLGPRC
Trigger: GCAGCGTGGACCAAGGTGCAGCCACAGGTTAGGCAGCTGTAGCCAACGTCCAGGTGGACCATGGAGGTAGAACCAGTGGGAGCTGCCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR CCA 90 bp CCCGCGGGCCCTGCTTCCTCCTCCAGTGTCGTTTCTCATGGTCCCTaGTCACGCTCCTGGTGGGCATCTGTACTCACTGTCCCTGATCTC +
Preference number: 1 (lower is better)
Translates to: PAGPASSSSVVSHGP*SRSWWASVLTVPDL
Trigger: GAGATCAGGGACAGTGAGTACAGATGCCCACCAGGAGCGTGACCAGGGACCATGAGAAACGACACTGGAGGAGGAAGCAGGGCCCGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR TCA 90 bp TGGTCCCTGGTCACGCTCCTGGTGGGCATCTGTACTCACTGTCCCTaGTCTCTCTCCTCCCTGCACTCCGGGCCTTATGGCCCTCTTGAG +
Preference number: 1 (lower is better)
Translates to: WSLVTLLVGICTHCP*SLSSLHSGPYGPLE
Trigger: CTCAAGAGGGCCATAAGGCCCGGAGTGCAGGGAGGAGAGAGATCAGGGACAGTGAGTACAGATGCCCACCAGGAGCGTGACCAGGGACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR GCA 90 bp TTGAGCCTCAGCTGGAACCTGAGGTCTGACTGGCACCTGCATAGCTaGCCAGCACTGCGCTCTGGGCAGGGCCTCTCACCTCAAACCCTA +
Preference number: 1 (lower is better)
Translates to: LSLSWNLRSDWHLHS*PALRSGQGLSPQTL
Trigger: TAGGGTTTGAGGTGAGAGGCCCTGCCCAGAGCGCAGTGCTGGGCAGCTATGCAGGTGCCAGTCAGACCTCAGGTTCCAGCTGAGGCTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR GCA 90 bp GACCTTGTCAAGGTCCTCCTAAACATGGAACTGTGGCTGACGGCCTaGCCAGAGGGTGGCCTGCCTAGAGGGTGTTCCAGCTGGCGTCTG +
Preference number: 1 (lower is better)
Translates to: DLVKVLLNMELWLTA*PEGGLPRGCSSWRL
Trigger: CAGACGCCAGCTGGAACACCCTCTAGGCAGGCCACCCTCTGGGCAGGCCGTCAGCCACAGTTCCATGTTTAGGAGGACCTTGACAAGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR CCA 90 bp CATCCCCTGGTCCAGCCACCGGGCTCCTCGCAGTTCCCAAACACATaGGTTCACCCATCTCAGCGCATGCGCACTTGGCTGCAACAACAC +
Preference number: 1 (lower is better)
Translates to: HPLVQPPGSSQFPNT*VHPSQRMRTWLQQH
Trigger: GTGTTGTTGCAGCCAAGTGCGCATGCGCTGAGATGGGTGAACCCATGTGTTTGGGAACTGCGAGGAGCCCGGTGGCTGGACCAGGGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR CCA 90 bp CCCCAACCCGAGCTGTGCCGTGGAGGAGGAAAGCACAGCTTGGCCTaGTACTCACCAAGCTCTCGTCATGGTGTCCGACACTCCCTTCTG +
Preference number: 1 (lower is better)
Translates to: PQPELCRGGGKHSLA*YSPSSRHGVRHSLL
Trigger: CAGAAGGGAGTGTCGGACACCATGACGAGAGCTTGGTGAGTACCAGGCCAAGCTGTGCTTTCCTCCTCCACGGCACAGCTCGGGTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR CCA 90 bp TGGAACCCCAACCCGAGCTGTGCCGTGGAGGAGGAAAGCACAGCTTaGCCTGGTACTCACCAAGCTCTCGTCATGGTGTCCGACACTCCC +
Preference number: 1 (lower is better)
Translates to: WNPNPSCAVEEESTA*PGTHQALVMVSDTP
Trigger: GGGAGTGTCGGACACCATGACGAGAGCTTGGTGAGTACCAGGCCAAGCTGTGCTTTCCTCCTCCACGGCACAGCTCGGGTTGGGGTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR GCA 90 bp ACAGCCCAGAAGCCTCATAGCTTCCAGGAACCTCCTGTCTCTGTCTaGGTAGAAGCCCACAAGGCTCACATGCCCGGGGTCCCATGTGCC +
Preference number: 1 (lower is better)
Translates to: TAQKPHSFQEPPVSV*VEAHKAHMPGVPCA
Trigger: GGCACATGGGACCCCGGGCATGTGAGCCTTGTGGGCTTCTACGCAGACAGAGACAGGAGGTTCCTGGAAGCTATGAGGCTTCTGGGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR CCA 90 bp AGGAGGAAAGCACAGCTTGGCCTGGTACTCACCAAGCTCTCGTCATaGTGTCCGACACTCCCTTCTGTCTCCTCGGAGGGCCAGGCTTCC +
Preference number: 1 (lower is better)
Translates to: RRKAQLGLVLTKLSS*CPTLPSVSSEGQAS
Trigger: GGAAGCCTGGCCCTCCGAGGAGACAGAAGGGAGTGTCGGACACCATGACGAGAGCTTGGTGAGTACCAGGCCAAGCTGTGCTTTCCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR CCA 90 bp TTCTTGCCTAGAGTAAGGTACCTTCCAGGGCCAGCTGGGACCCTCTaGAACCCCAACCCGAGCTGTGCCGTGGAGGAGGAAAGCACAGCT +
Preference number: 1 (lower is better)
Translates to: FLPRVRYLPGPAGTL*NPNPSCAVEEESTA
Trigger: AGCTGTGCTTTCCTCCTCCACGGCACAGCTCGGGTTGGGGTTCCAGAGGGTCCCAGCTGGCCCTGGAAGGTACCTTACTCTAGGCAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR TCA 90 bp CATTTGTGTGGCAGGACAAGCATGGGGCAAGAGGGACGCGTTAACTaGAAGTTGCTGAAGACAGGCTCCTGTCGGCCAGGTGTGGGCGGC +
Preference number: 1 (lower is better)
Translates to: HLCGRTSMGQEGRVN*KLLKTGSCRPGVGG
Trigger: GCCGCCCACACCTGGCCGACAGGAGCCTGTCTTCAGCAACTTTCAGTTAACGCGTCCCTCTTGCCCCATGCTTGTCCTGCCACACAAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR GCA 90 bp AGACCCTACTTGTCTCCTGAGCCACGTCCTAGCCTCTGCCGGGTCTaGAGGAGCTGGGGTGGGGTCATTGTGAGTGGGTTCTTAGGTGAA +
Preference number: 1 (lower is better)
Translates to: RPYLSPEPRPSLCRV*RSWGGVIVSGFLGE
Trigger: TTCACCTAAGAACCCACTCACAATGACCCCACCCCAGCTCCTGCAGACCCGGCAGAGGCTAGGACGTGGCTCAGGAGACAAGTAGGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR GCA 90 bp ACTGAGCCACAGGCTCACCTCAGCCAGTCAAAAGGACTTGGGCACTaGCTCATTCAAGCCACCTTGGAGCAGACGTGGCTACGCTCCCAG +
Preference number: 1 (lower is better)
Translates to: TEPQAHLSQSKGLGH*LIQATLEQTWLRSQ
Trigger: CTGGGAGCGTAGCCACGTCTGCTCCAAGGTGGCTTGAATGAGGCAGTGCCCAAGTCCTTTTGACTGGCTGAGGTGAGCCTGTGGCTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
3UTR CCA 90 bp GCTTCCTCCTCCAGTGTCGTTTCTCATGGTCCCTGGTCACGCTCCTaGTGGGCATCTGTACTCACTGTCCCTGATCTCTCTCCTCCCTGC +
Preference number: 1 (lower is better)
Translates to: ASSSSVVSHGPWSRS*WASVLTVPDLSPPC
Trigger: GCAGGGAGGAGAGAGATCAGGGACAGTGAGTACAGATGCCCACCAGGAGCGTGACCAGGGACCATGAGAAACGACACTGGAGGAGGAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR CCA 90 bp TTGTCTCCTGAGCCACGTCCTAGCCTCTGCCGGGTCTGCAGGAGCTaGGGTGGGGTCATTGTGAGTGGGTTCTTAGGTGAAGAAATGCAC +
Preference number: 1 (lower is better)
Translates to: LSPEPRPSLCRVCRS*GGVIVSGFLGEEMH
Trigger: GTGCATTTCTTCACCTAAGAACCCACTCACAATGACCCCACCCCAGCTCCTGCAGACCCGGCAGAGGCTAGGACGTGGCTCAGGAGACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR GCA 90 bp GATTCAGCGCTGGCCAACAAACCCAGACAGGTACGGCCAGAGCACTaGTCCCAGGAATTTGGAGTTGATACCTGGGGACCACAACACGCA +
Preference number: 1 (lower is better)
Translates to: DSALANKPRQVRPEH*SQEFGVDTWGPQHA
Trigger: TGCGTGTTGTGGTCCCCAGGTATCAACTCCAAATTCCTGGGAGCAGTGCTCTGGCCGTACCTGTCTGGGTTTGTTGGCCAGCGCTGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR GCA 90 bp GTCACAATAGTGCCTGGGGTGGCTGTCATCTCTACGAGGCCTGGGTaGACTGACACCATTCCTGCAAAGGGAAGGCTCAGACAATGGCAG +
Preference number: 1 (lower is better)
Translates to: VTIVPGVAVISTRPG*TDTIPAKGRLRQWQ
Trigger: CTGCCATTGTCTGAGCCTTCCCTTTGCAGGAATGGTGTCAGTGCACCCAGGCCTCGTAGAGATGACAGCCACCCCAGGCACTATTGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR TCA 90 bp AATAGTGCCTGGGGTGGCTGTCATCTCTACGAGGCCTGGGTGCACTaGCACCATTCCTGCAAAGGGAAGGCTCAGACAATGGCAGTGTTG +
Preference number: 1 (lower is better)
Translates to: NSAWGGCHLYEAWVH*HHSCKGKAQTMAVL
Trigger: CAACACTGCCATTGTCTGAGCCTTCCCTTTGCAGGAATGGTGTCAGTGCACCCAGGCCTCGTAGAGATGACAGCCACCCCAGGCACTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR GCA 90 bp CCCTCCTCTTCCCGCTCCTCCACAGCCTCATCTCCAGGATCTATCTaGAGCTCTATGACGCATCTCACCGAGTATCTGGCTTCTTTTCCA +
Preference number: 1 (lower is better)
Translates to: PSSSRSSTASSPGSI*SSMTHLTEYLASFP
Trigger: TGGAAAAGAAGCCAGATACTCGGTGAGATGCGTCATAGAGCTGCAGATAGATCCTGGAGATGAGGCTGTGGAGGAGCGGGAAGAGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR GCA 90 bp GATTACGGAGGTGATGGCTGCAGCTGCAGACAGCTATTTGGCAAATaGTATGAACTATCCCTGATCTGCCCAGGGGAGGCGTGTCTGACC +
Preference number: 1 (lower is better)
Translates to: DYGGDGCSCRQLFGK*YELSLICPGEACLT
Trigger: GGTCAGACACGCCTCCCCTGGGCAGATCAGGGATAGTTCATAGCATTTGCCAAATAGCTGTCTGCAGCTGCAGCCATCACCTCCGTAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR CCA 90 bp TGGCCTGAATACCCTCACCACAGCTTGTGTCACCGCACACGGCATTaGGAAGACATGAGCACAGCTGCTCCAGCACACAACAGTTTGCAT +
Preference number: 1 (lower is better)
Translates to: WPEYPHHSLCHRTRH*EDMSTAAPAHNSLH
Trigger: ATGCAAACTGTTGTGTGCTGGAGCAGCTGTGCTCATGTCTTCCCAATGCCGTGTGCGGTGACACAAGCTGTGGTGAGGGTATTCAGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR CCA 90 bp CAGGTACGGCCAGAGCACTGCTCCCAGGAATTTGGAGTTGATACCTaGGGACCACAACACGCACATCTGGGAACTGGAGCTGAAAAACAG +
Preference number: 1 (lower is better)
Translates to: QVRPEHCSQEFGVDT*GPQHAHLGTGAEKQ
Trigger: CTGTTTTTCAGCTCCAGTTCCCAGATGTGCGTGTTGTGGTCCCCAGGTATCAACTCCAAATTCCTGGGAGCAGTGCTCTGGCCGTACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR TCA 90 bp ACCCTCACCACAGCTTGTGTCACCGCACACGGCATTGGGAAGACATaGGCACAGCTGCTCCAGCACACAACAGTTTGCATGAAAAGGATG +
Preference number: 1 (lower is better)
Translates to: TLTTACVTAHGIGKT*AQLLQHTTVCMKRM
Trigger: CATCCTTTTCATGCAAACTGTTGTGTGCTGGAGCAGCTGTGCTCATGTCTTCCCAATGCCGTGTGCGGTGACACAAGCTGTGGTGAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR TCA 90 bp GTTGATGCCCGGCTCTGTGCCCGACAAGATGGTAGCTGTGGAGACTaGTCTGAAAAAGCATCCTTCGTGACAGGTGGAAGTTGGATGGGA +
Preference number: 1 (lower is better)
Translates to: VDARLCARQDGSCGD*SEKASFVTGGSWMG
Trigger: TCCCATCCAACTTCCACCTGTCACGAAGGATGCTTTTTCAGATCAGTCTCCACAGCTACCATCTTGTCGGGCACAGAGCCGGGCATCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
3UTR CCA 90 bp CTGGCGTCTGTCTCTCATCGCGATGCCATCCTCATCCTGAGCCCCTaGACTCCTGTCCTGTCTCTCAGTTGCAGAGTGAAGATTTTGTTT +
Preference number: 1 (lower is better)
Translates to: LASVSHRDAILILSP*TPVLSLSCRVKILF
Trigger: AAACAAAATCTTCACTCTGCAACTGAGAGACAGGACAGGAGTCCAGGGGCTCAGGATGAGGATGGCATCGCGATGAGAGACAGACGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR CCA 90 bp TTTATTATGAATGACCTTGTCAAGGTCCTCCTAAACATGGAACTGTaGCTGACGGCCTGCCCAGAGGGTGGCCTGCCTAGAGGGTGTTCC +
Preference number: 1 (lower is better)
Translates to: FIMNDLVKVLLNMEL*LTACPEGGLPRGCS
Trigger: GGAACACCCTCTAGGCAGGCCACCCTCTGGGCAGGCCGTCAGCCACAGTTCCATGTTTAGGAGGACCTTGACAAGGTCATTCATAATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR TCA 90 bp TGCTGTCTGGGAAATGCACTTATTAGGAGAGGGACAAACTGTGACTaGGCCACAGGCTCACCTCAGCCAGTCAAAAGGACTTGGGCACTG +
Preference number: 1 (lower is better)
Translates to: CCLGNALIRRGTNCD*ATGSPQPVKRTWAL
Trigger: CAGTGCCCAAGTCCTTTTGACTGGCTGAGGTGAGCCTGTGGCTCAGTCACAGTTTGTCCCTCTCCTAATAAGTGCATTTCCCAGACAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
3UTR CCA 90 bp CCGTCGTTGACTTGTGTCCCGCCTCGCCGGGCAATGATGTATGTGTaGAGCGCAGTCATGTTCTTTGTTACGCAACACAGTTTTCACCTT +
Preference number: 1 (lower is better)
Translates to: PSLTCVPPRRAMMYV*SAVMFFVTQHSFHL
Trigger: AAGGTGAAAACTGTGTTGCGTAACAAAGAACATGACTGCGCTCCACACATACATCATTGCCCGGCGAGGCGGGACACAAGTCAACGACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR GCA 90 bp CCCACCCAGCCAATTAGGTTCCTCAGTTGCATGACACCAAGGAGCTaGTGTCTGGGAAATGCACTTATTAGGAGAGGGACAAACTGTGAC +
Preference number: 1 (lower is better)
Translates to: PTQPIRFLSCMTPRS*CLGNALIRRGTNCD
Trigger: GTCACAGTTTGTCCCTCTCCTAATAAGTGCATTTCCCAGACAGCAGCTCCTTGGTGTCATGCAACTGAGGAACCTAATTGGCTGGGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
3UTR GCA 90 bp AGCTGCAGACAGCTATTTGGCAAATGCTATGAACTATCCCTGATCTaGCCAGGGGAGGCGTGTCTGACCCTTCACCATTGGAAATCAACT +
Preference number: 1 (lower is better)
Translates to: SCRQLFGKCYELSLI*PGEACLTLHHWKST
Trigger: AGTTGATTTCCAATGGTGAAGGGTCAGACACGCCTCCCCTGGGCAGATCAGGGATAGTTCATAGCATTTGCCAAATAGCTGTCTGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR GCA 90 bp GGCTCAGACAATGGCAGTGTTGATTACGGAGGTGATGGCTGCAGCTaGAGACAGCTATTTGGCAAATGCTATGAACTATCCCTGATCTGC +
Preference number: 1 (lower is better)
Translates to: GSDNGSVDYGGDGCS*RQLFGKCYELSLIC
Trigger: GCAGATCAGGGATAGTTCATAGCATTTGCCAAATAGCTGTCTGCAGCTGCAGCCATCACCTCCGTAATCAACACTGCCATTGTCTGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR GCA 90 bp AGGGAAGGCTCAGACAATGGCAGTGTTGATTACGGAGGTGATGGCTaGAGCTGCAGACAGCTATTTGGCAAATGCTATGAACTATCCCTG +
Preference number: 1 (lower is better)
Translates to: REGSDNGSVDYGGDG*SCRQLFGKCYELSL
Trigger: CAGGGATAGTTCATAGCATTTGCCAAATAGCTGTCTGCAGCTGCAGCCATCACCTCCGTAATCAACACTGCCATTGTCTGAGCCTTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR GCA 90 bp GAAGTTGGATGGGAACAACCCACCCAGCCAATTAGGTTCCTCAGTTaGATGACACCAAGGAGCTGCTGTCTGGGAAATGCACTTATTAGG +
Preference number: 1 (lower is better)
Translates to: EVGWEQPTQPIRFLS*MTPRSCCLGNALIR
Trigger: CCTAATAAGTGCATTTCCCAGACAGCAGCTCCTTGGTGTCATGCAACTGAGGAACCTAATTGGCTGGGTGGGTTGTTCCCATCCAACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
3UTR CCA 90 bp GCTCAACAGCCTGAATTTCTGATTTTCAGCATTTGCAGGTTTCTGTaGCCTGAATACCCTCACCACAGCTTGTGTCACCGCACACGGCAT +
Preference number: 1 (lower is better)
Translates to: AQQPEFLIFSICRFL*PEYPHHSLCHRTRH
Trigger: ATGCCGTGTGCGGTGACACAAGCTGTGGTGAGGGTATTCAGGCCACAGAAACCTGCAAATGCTGAAAATCAGAAATTCAGGCTGTTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR TCA 90 bp GGTTATGTAACTGTTTGCTACCTGGCTTCTCTAACATGCTGGTCTTaGCCCCTCAGCAATGTGGTTTCTACGGACAGAAACCACTCCCGA +
Preference number: 1 (lower is better)
Translates to: GYVTVCYLASLTCWS*PLSNVVSTDRNHSR
Trigger: TCGGGAGTGGTTTCTGTCCGTAGAAACCACATTGCTGAGGGGTCAAGACCAGCATGTTAGAGAAGCCAGGTAGCAAACAGTTACATAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR CCA 90 bp CCCAGGAATTTGGAGTTGATACCTGGGGACCACAACACGCACATCTaGGAACTGGAGCTGAAAAACAGATCAAGTCAGGGACATCTTCTT +
Preference number: 1 (lower is better)
Translates to: PRNLELIPGDHNTHI*ELELKNRSSQGHLL
Trigger: AAGAAGATGTCCCTGACTTGATCTGTTTTTCAGCTCCAGTTCCCAGATGTGCGTGTTGTGGTCCCCAGGTATCAACTCCAAATTCCTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR CCA 90 bp ATCTCAGCTCTCGTCAGCCTTGCAAAGCTTGCTGCATCTGAGTCTTaGGCTCCCGGTCCACTGCTTAAAAAGTTACTATCACACAAAGTC +
Preference number: 1 (lower is better)
Translates to: ISALVSLAKLAASES*APGPLLKKLLSHKV
Trigger: GACTTTGTGTGATAGTAACTTTTTAAGCAGTGGACCGGGAGCCCAAGACTCAGATGCAGCAAGCTTTGCAAGGCTGACGAGAGCTGAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
3UTR TCA 90 bp TTGGGAAGACATGAGCACAGCTGCTCCAGCACACAACAGTTTGCATaGAAAGGATGCCCGGTGAAGGTGGCAGAAAATAAAAGTCGTCAT +
Preference number: 1 (lower is better)
Translates to: LGRHEHSCSSTQQFA*KGCPVKVAENKSRH
Trigger: ATGACGACTTTTATTTTCTGCCACCTTCACCGGGCATCCTTTTCATGCAAACTGTTGTGTGCTGGAGCAGCTGTGCTCATGTCTTCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR GCA 90 bp GCCTTGCAAAGCTTGCTGCATCTGAGTCTTGGGCTCCCGGTCCACTaGTTAAAAAGTTACTATCACACAAAGTCGAAAGTAGACAGTTCC +
Preference number: 1 (lower is better)
Translates to: ALQSLLHLSLGLPVH*LKSYYHTKSKVDSS
Trigger: GGAACTGTCTACTTTCGACTTTGTGTGATAGTAACTTTTTAAGCAGTGGACCGGGAGCCCAAGACTCAGATGCAGCAAGCTTTGCAAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
3UTR CCA 90 bp GGGACATCTTCTTTAGACAGAAATGTAGTCTCACTGCAGCAAGTATaGCTTAAACCTGCTTCTGAACCGTGCACAGTTGTAGGCCTGTCT +
Preference number: 1 (lower is better)
Translates to: GTSSLDRNVVSLQQV*LKPASEPCTVVGLS
Trigger: AGACAGGCCTACAACTGTGCACGGTTCAGAAGCAGGTTTAAGCCATACTTGCTGCAGTGAGACTACATTTCTGTCTAAAGAAGATGTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR TCA 90 bp TGTAGTCACATAAGCCCACGAGTTTCTCTGTGTTCAAATGGTGTCTaGGGCACAGATCTTTGTAACGTTGCATTTTCACATTTGTGTGGC +
Preference number: 1 (lower is better)
Translates to: CSHISPRVSLCSNGV*GTDLCNVAFSHLCG
Trigger: GCCACACAAATGTGAAAATGCAACGTTACAAAGATCTGTGCCTCAGACACCATTTGAACACAGAGAAACTCGTGGGCTTATGTGACTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR CCA 90 bp TTTCCAGATGATGTAGATTGCCTTTTTCTTGAAAATGTAGACGTTTaGGAACTGTTGGAGACACACACACATTCTCAGCCCATCACTCCG +
Preference number: 1 (lower is better)
Translates to: FPDDVDCLFLENVDV*ELLETHTHSQPITP
Trigger: CGGAGTGATGGGCTGAGAATGTGTGTGTGTCTCCAACAGTTCCCAAACGTCTACATTTTCAAGAAAAAGGCAATCTACATCATCTGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR TCA 90 bp CACACTTCACAGCTTTCTTCTACACATATAAATCTTTTGAACATGTaGATCGTTTCCACACACCCTCCCTGGCCTTCTGTGTTGAATTTT +
Preference number: 1 (lower is better)
Translates to: HTSQLSSTHINLLNM*IVSTHPPWPSVLNF
Trigger: AAAATTCAACACAGAAGGCCAGGGAGGGTGTGTGGAAACGATTCACATGTTCAAAAGATTTATATGTGTAGAAGAAAGCTGTGAAGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR TCA 90 bp TTAAAGATGAGCAAAAATAGACAGCACAGAATTGTCTGTAGAGTCTaGCATACAAATTGCTGGGAGTTAGGCCTGAGTCTACTTGGAAAT +
Preference number: 1 (lower is better)
Translates to: LKMSKNRQHRIVCRV*HTNCWELGLSLLGN
Trigger: ATTTCCAAGTAGACTCAGGCCTAACTCCCAGCAATTTGTATGTCAGACTCTACAGACAATTCTGTGCTGTCTATTTTTGCTCATCTTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR-3UTR GCA 90 bp GCCGCCGTCCAGAGAGAAACTCCTGCCACGTGTGTGAGGCTGACCGAACCCCGCAGCCTCTGCCGGGTCTaGAGGAGCTGGGGTGGGGTC +
Preference number: 2 (lower is better)
Translates to: AAVQRETPATCVRLTEPRSLCRV*RSWGGV
Trigger: GACCCCACCCCAGCTCCTGCAGACCCGGCAGAGGCT...GCGGGGTTCGGTCAGCCTCACACACGTGGCAGGAGTTTCTCTCTGGACGGCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR-3UTR GCA 90 bp AAGCCCACAAGGCTCACATGCCCGGGGTCCCATGTGCCTGGTCCTGTCACCTTTCAGCCTTGTGGTCCCTaGAGCCCCCGGCTCCCTGCA +
Preference number: 2 (lower is better)
Translates to: KPTRLTCPGSHVPGPVTFQPCGP*SPRLPA
Trigger: TGCAGGGAGCCGGGGGCTGCAGGGACCACAAGGCTG...AAAGGTGACAGGACCAGGCACATGGGACCCCGGGCATGTGAGCCTTGTGGGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR GCA 90 bp TCTCTCTTCCGTCGCCCGCGGGCCCTGCTTCCTCCTCCAGTGTCGTTTCTCATGACCTGGTCCTCCCAGTaGCTCACCGGCCACTCGGCA +
Preference number: 2 (lower is better)
Translates to: SLFRRPRALLPPPVSFLMTWSSQ*LTGHSA
Trigger: TGCCGAGTGGCCGGTGAGGCACTGGGAGGACCAGGT...CATGAGAAACGACACTGGAGGAGGAAGCAGGGCCCGCGGGCGACGGAAGAGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR CCA 90 bp TCCATGCTGCAAGTACCTCTTGGCAAATCCTCAGCCACCCCCACCTGGTCCACGCTGGGACGCCAGCCCTaGGCCAGGTGGGCTGCTCTG +
Preference number: 2 (lower is better)
Translates to: SMLQVPLGKSSATPTWSTLGRQP*ARWAAL
Trigger: CAGAGCAGCCCACCTGGCCCAGGGCTGGCGTCCCAG...CGTGGACCAGGTGGGGGTGGCTGAGGATTTGCCAAGAGGTACTTGCAGCATGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR CCA 90 bp GGCTCCTCGCAGTTCCCAAACACATGGGTTCACCCATCTCAGCGCATGCGCACTGCAAGCGCCCCAGGGTaGGGTCCCCACCAGCCTTCC +
Preference number: 2 (lower is better)
Translates to: GSSQFPNTWVHPSQRMRTASAPG*GPHQPS
Trigger: GGAAGGCTGGTGGGGACCCCACCCTGGGGCGCTTGC...AGTGCGCATGCGCTGAGATGGGTGAACCCATGTGTTTGGGAACTGCGAGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR TCA 90 bp GTCCACCTGGACGTTGGCTACAGCTGCCTAACCTGTGGCTGCACCTTGGTCCACTGGGATAGGTGCCACTaGCGGGTGCCACGGACCCTC +
Preference number: 2 (lower is better)
Translates to: VHLDVGYSCLTCGCTLVHWDRCH*RVPRTL
Trigger: GAGGGTCCGTGGCACCCGTCAGTGGCACCTATCCCA...GTGGACCAAGGTGCAGCCACAGGTTAGGCAGCTGTAGCCAACGTCCAGGTGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR TCA 90 bp GCCGCCGTCCAGAGAGAAACTCCTGCCACGTGTGTGAGGCTGACCGAACCCCGCCTGCAGGTACAAAGGTaGGCACCAGACAGAGCTCCC +
Preference number: 2 (lower is better)
Translates to: AAVQRETPATCVRLTEPRLQVQR*APDRAP
Trigger: GGGAGCTCTGTCTGGTGCTCACCTTTGTACCTGCAG...GCGGGGTTCGGTCAGCCTCACACACGTGGCAGGAGTTTCTCTCTGGACGGCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR-3UTR CCA 90 bp GGCTCCTCGCAGTTCCCAAACACATGGGTTCACCCATCTCAGCGCATGCGCACTCCTCCACTCCTCCTCTaGGACGCCAGCCCTGGGCCA +
Preference number: 2 (lower is better)
Translates to: GSSQFPNTWVHPSQRMRTPPLLL*DASPGP
Trigger: TGGCCCAGGGCTGGCGTCCCAGAGGAGGAGTGGAGG...AGTGCGCATGCGCTGAGATGGGTGAACCCATGTGTTTGGGAACTGCGAGGAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR TCA 90 bp TCTCTCTTCCGTCGCCCGCGGGCCCTGCTTCCTCCTCCAGTGTCGTTTCTCATGATGCTCTGCACGCTGTaGCTCCAGCCTTGTGGTCCC +
Preference number: 2 (lower is better)
Translates to: SLFRRPRALLPPPVSFLMMLCTL*LQPCGP
Trigger: GGGACCACAAGGCTGGAGTCACAGCGTGCAGAGCAT...CATGAGAAACGACACTGGAGGAGGAAGCAGGGCCCGCGGGCGACGGAAGAGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR GCA 90 bp TCTCTCTTCCGTCGCCCGCGGGCCCTGCTTCCTCCTCCAGTGTCGTTTCTCATGGGCTCCCTGCACCAGTaGCACGGCATCATCATACCG +
Preference number: 2 (lower is better)
Translates to: SLFRRPRALLPPPVSFLMGSLHQ*HGIIIP
Trigger: CGGTATGATGATGCCGTGGCACTGGTGCAGGGAGCC...CATGAGAAACGACACTGGAGGAGGAAGCAGGGCCCGCGGGCGACGGAAGAGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR GCA 90 bp TGCTGCAAGTACCTCTTGGCAAATCCTCAGCCACCCCCACCTGGTCCACGCTGCTCTCGCCCTGTCACGTaGATCCCCTGGTCCAGCCAC +
Preference number: 2 (lower is better)
Translates to: CCKYLLANPQPPPPGPRCSRPVT*IPWSSH
Trigger: GTGGCTGGACCAGGGGATGCACGTGACAGGGCGAGA...GCAGCGTGGACCAGGTGGGGGTGGCTGAGGATTTGCCAAGAGGTACTTGCAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR GCA 90 bp CCCGCCTGGGGCCAACGCCGCCCTCTCCGCACACACAGGTGCCTTCTCAGGAGCCAACCTGGTCCATGCTaGAAGTACCTCTTGGCAAAT +
Preference number: 2 (lower is better)
Translates to: PAWGQRRPLRTHRCLLRSQPGPC*KYLLAN
Trigger: ATTTGCCAAGAGGTACTTGCAGCATGGACCAGGTTG...GCTCCTGAGAAGGCACCTGTGTGTGCGGAGAGGGCGGCGTTGGCCCCAGGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR CCA 90 bp CCCGCCTGGGGCCAACGCCGCCCTCTCCGCACACACAGGTGCCTTCTCAGGAGCATCTCACCGAGTATCTaGCTTCTTTTCCAGCTCCTC +
Preference number: 2 (lower is better)
Translates to: PAWGQRRPLRTHRCLLRSISPSI*LLFQLL
Trigger: GAGGAGCTGGAAAAGAAGCCAGATACTCGGTGAGAT...GCTCCTGAGAAGGCACCTGTGTGTGCGGAGAGGGCGGCGTTGGCCCCAGGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR CAA 90 bp GTCCCTGATCTCTCTCCTCCCTGCACTCCGGGCCTTATGGCCCTCTaGAGCCTCAGCTGGAACCTGAGGTCTGACTGGCACCTGCATAGC +
Preference number: 2 (lower is better)
Translates to: VPDLSPPCTPGLMAL*SLSWNLRSDWHLHS
Trigger: GCTATGCAGGTGCCAGTCAGACCTCAGGTTCCAGCTGAGGCTCAAGAGGGCCATAAGGCCCGGAGTGCAGGGAGGAGAGAGATCAGGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR CAA 90 bp CTGGAACCCCAACCCGAGCTGTGCCGTGGAGGAGGAAAGCACAGCTaGGCCTGGTACTCACCAAGCTCTCGTCATGGTGTCCGACACTCC +
Preference number: 2 (lower is better)
Translates to: LEPQPELCRGGGKHS*AWYSPSSRHGVRHS
Trigger: GGAGTGTCGGACACCATGACGAGAGCTTGGTGAGTACCAGGCCAAGCTGTGCTTTCCTCCTCCACGGCACAGCTCGGGTTGGGGTTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR-3UTR GCA 90 bp GTCCACCTGGACGTTGGCTACAGCTGCCTAACCTGTGGCTGCACCTTGGTCCACCCAGGTGGGCTGCTCTaGACTCAGTGGTGTGCAGGT +
Preference number: 2 (lower is better)
Translates to: VHLDVGYSCLTCGCTLVHPGGLL*TQWCAG
Trigger: ACCTGCACACCACTGAGTGCAGAGCAGCCCACCTGG...GTGGACCAAGGTGCAGCCACAGGTTAGGCAGCTGTAGCCAACGTCCAGGTGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR GCA 90 bp AACCCCAACCTGGTCCATGCTGCAAGTACCTCTTGGCAAATCCTCAGCCACCCCGGTGCCACTGACGGGTaGCACGGACCCTCCTCCACT +
Preference number: 2 (lower is better)
Translates to: NPNLVHAASTSWQILSHPGATDG*HGPSST
Trigger: AGTGGAGGAGGGTCCGTGGCACCCGTCAGTGGCACC...GGGGTGGCTGAGGATTTGCCAAGAGGTACTTGCAGCATGGACCAGGTTGGGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR GCA 90 bp TCCATGCTGCAAGTACCTCTTGGCAAATCCTCAGCCACCCCCACCTGGTCCACGGCCCGGGGTCCCATGTaGCTGGTCCTGTCACCTTTC +
Preference number: 2 (lower is better)
Translates to: SMLQVPLGKSSATPTWSTARGPM*LVLSPF
Trigger: GAAAGGTGACAGGACCAGGCACATGGGACCCCGGGC...CGTGGACCAGGTGGGGGTGGCTGAGGATTTGCCAAGAGGTACTTGCAGCATGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR TCA 90 bp GCCGCCGTCCAGAGAGAAACTCCTGCCACGTGTGTGAGGCTGACCGAACCCCGCCCCCGGGACAAAAACTaGACACAGTTCAGAGACACA +
Preference number: 2 (lower is better)
Translates to: AAVQRETPATCVRLTEPRPRDKN*TQFRDT
Trigger: TGTGTCTCTGAACTGTGTTCAGTTTTTGTCCCGGGG...GCGGGGTTCGGTCAGCCTCACACACGTGGCAGGAGTTTCTCTCTGGACGGCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR-3UTR CCA 90 bp TCAGCAACCCCAACCTGGTCCATGCTGCAAGTACCTCTTGGCAAATCCTCAGCCGTCACGTGCATCCCCTaGTCCAGCCACCGGGCTCCT +
Preference number: 2 (lower is better)
Translates to: SATPTWSMLQVPLGKSSAVTCIP*SSHRAP
Trigger: AGGAGCCCGGTGGCTGGACCAGGGGATGCACGTGAC...GGCTGAGGATTTGCCAAGAGGTACTTGCAGCATGGACCAGGTTGGGGTTGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR TCA 90 bp CCCACAAGGCTCACATGCCCGGGGTCCCATGTGCCTGGTCCTGTCACCTTTCCCCTATCTGCAGCTCTATaGCGCATCTCACCGAGTATC +
Preference number: 2 (lower is better)
Translates to: PTRLTCPGSHVPGPVTFPLSAAL*RISPSI
Trigger: GATACTCGGTGAGATGCGTCATAGAGCTGCAGATAG...GGGAAAGGTGACAGGACCAGGCACATGGGACCCCGGGCATGTGAGCCTTGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR GCA 90 bp GTCCACCTGGACGTTGGCTACAGCTGCCTAACCTGTGGCTGCACCTTGGTCCACCCCCAACCTGGTCCATaGTGCAAGTACCTCTTGGCA +
Preference number: 2 (lower is better)
Translates to: VHLDVGYSCLTCGCTLVHPQPGP*CKYLLA
Trigger: TGCCAAGAGGTACTTGCAGCATGGACCAGGTTGGGG...GTGGACCAAGGTGCAGCCACAGGTTAGGCAGCTGTAGCCAACGTCCAGGTGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR GCA 90 bp CAGGTGGAAGTTGGATGGGAACAACCCACCCAGCCAATTAGGTTCCTCAGTTGCAGGGCCAGGCTTCCGTaGTCTGGGCTCCAGCAGGAC +
Preference number: 2 (lower is better)
Translates to: QVEVGWEQPTQPIRFLSCRARLP*SGLQQD
Trigger: GTCCTGCTGGAGCCCAGAGCACGGAAGCCTGGCCCT...GCAACTGAGGAACCTAATTGGCTGGGTGGGTTGTTCCCATCCAACTTCCACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR-3UTR CCA 90 bp TCAGCAACCCCAACCTGGTCCATGCTGCAAGTACCTCTTGGCAAATCCTCAGCCCTCACATCCATCCCCTaGTCCAGCCACCGGGCTCCT +
Preference number: 2 (lower is better)
Translates to: SATPTWSMLQVPLGKSSALTSIP*SSHRAP
Trigger: AGGAGCCCGGTGGCTGGACCAGGGGATGGATGTGAG...GGCTGAGGATTTGCCAAGAGGTACTTGCAGCATGGACCAGGTTGGGGTTGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR CCA 90 bp CAACATACACTTGTTGATGCCCGGCTCTGTGCCCGACAAGATGGTAGCTGTGGACAGGCTTCCGTGCTCTaGGCTCCAGCAGGACGGGGA +
Preference number: 2 (lower is better)
Translates to: QHTLVDARLCARQDGSCGQASVL*APAGRG
Trigger: TCCCCGTCCTGCTGGAGCCCAGAGCACGGAAGCCTG...TCCACAGCTACCATCTTGTCGGGCACAGAGCCGGGCATCAACAAGTGTATGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR-3UTR TCA 90 bp TCTCTCTTCCGTCGCCCGCGGGCCCTGCTTCCTCCTCCAGTGTCGTTTCTCATGCTAACATGCTGGTCTTaGCCCCTCAGCAATGTGGTT +
Preference number: 2 (lower is better)
Translates to: SLFRRPRALLPPPVSFLMLTCWS*PLSNVV
Trigger: AACCACATTGCTGAGGGGTCAAGACCAGCATGTTAG...CATGAGAAACGACACTGGAGGAGGAAGCAGGGCCCGCGGGCGACGGAAGAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR CCA 90 bp TCAGCAACCCCAACCTGGTCCATGCTGCAAGTACCTCTTGGCAAATCCTCAGCCCTCCTCCCATGTGCCTaGCCCTGTCACCTCTTCACC +
Preference number: 2 (lower is better)
Translates to: SATPTWSMLQVPLGKSSALLPCA*PCHLFT
Trigger: GGTGAAGAGGTGACAGGGCCAGGCACATGGGAGGAG...GGCTGAGGATTTGCCAAGAGGTACTTGCAGCATGGACCAGGTTGGGGTTGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR CAA 90 bp CCAGGGAGAGCTAAGGAAATGCTGGCGGTTGGAACCTGTTCATTCTaGCCTAGAGTAAGGTACCTTCCAGGGCCAGCTGGGACCCTCTGG +
Preference number: 2 (lower is better)
Translates to: PGRAKEMLAVGTCSF*PRVRYLPGPAGTLW
Trigger: CCAGAGGGTCCCAGCTGGCCCTGGAAGGTACCTTACTCTAGGCAAGAATGAACAGGTTCCAACCGCCAGCATTTCCTTAGCTCTCCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR CAA 90 bp AACCCAGACAGGTACGGCCAGAGCACTGCTCCCAGGAATTTGGAGTaGATACCTGGGGACCACAACACGCACATCTGGGAACTGGAGCTG +
Preference number: 2 (lower is better)
Translates to: NPDRYGQSTAPRNLE*IPGDHNTHIWELEL
Trigger: CAGCTCCAGTTCCCAGATGTGCGTGTTGTGGTCCCCAGGTATCAACTCCAAATTCCTGGGAGCAGTGCTCTGGCCGTACCTGTCTGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR-3UTR TCA 90 bp GGCTCCTCGCAGTTCCCAAACACATGGGTTCACCCATCTCAGCGCATGCGCACTTTTGGCTCCAAGAGTTaGCAGCTCCCAAGTCCGGAA +
Preference number: 2 (lower is better)
Translates to: GSSQFPNTWVHPSQRMRTFGSKS*QLPSPE
Trigger: TTCCGGACTTGGGAGCTGTCAACTCTTGGAGCCAAA...AGTGCGCATGCGCTGAGATGGGTGAACCCATGTGTTTGGGAACTGCGAGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR TCA 90 bp CCCACAAGGCTCACATGCCCGGGGTCCCATGTGCCTGGTCCTGTCACCTTTCCCGAAAAGGATGCCCGGTaGAGGTGGCAGAAAATAAAA +
Preference number: 2 (lower is better)
Translates to: PTRLTCPGSHVPGPVTFPEKDAR*RWQKIK
Trigger: TTTTATTTTCTGCCACCTTCACCGGGCATCCTTTTC...GGGAAAGGTGACAGGACCAGGCACATGGGACCCCGGGCATGTGAGCCTTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR TCA 90 bp TCTCTCTTCCGTCGCCCGCGGGCCCTGCTTCCTCCTCCAGTGTCGTTTCTCATGTCCCGACACTTACTCTaGAACTCCCTCCACAAAATC +
Preference number: 2 (lower is better)
Translates to: SLFRRPRALLPPPVSFLMSRHLL*NSLHKI
Trigger: GATTTTGTGGAGGGAGTTTCAGAGTAAGTGTCGGGA...CATGAGAAACGACACTGGAGGAGGAAGCAGGGCCCGCGGGCGACGGAAGAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR TCA 90 bp TTGTTGATGCCCGGCTCTGTGCCCGACAAGATGGTAGCTGTGGAGACTGATCTGGGGACAAACTGTGACTaGGCCACAGGCTCACCTCAG +
Preference number: 2 (lower is better)
Translates to: LLMPGSVPDKMVAVETDLGTNCD*ATGSPQ
Trigger: CTGAGGTGAGCCTGTGGCTCAGTCACAGTTTGTCCC...CAGATCAGTCTCCACAGCTACCATCTTGTCGGGCACAGAGCCGGGCATCAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
3UTR-3UTR GCA 90 bp TGCTGCAAGTACCTCTTGGCAAATCCTCAGCCACCCCCACCTGGTCCACGCTGCTCCCTCCACAAAATCTaGAGAGCCTCCTTCACTCCT +
Preference number: 2 (lower is better)
Translates to: CCKYLLANPQPPPPGPRCSLHKI*RASFTP
Trigger: AGGAGTGAAGGAGGCTCTGCAGATTTTGTGGAGGGA...GCAGCGTGGACCAGGTGGGGGTGGCTGAGGATTTGCCAAGAGGTACTTGCAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR GCA 90 bp TCAGCAACCCCAACCTGGTCCATGCTGCAAGTACCTCTTGGCAAATCCTCAGCCCGGATGAGGGCGTTCTaGATGAAGGCAGCTCCTCCA +
Preference number: 2 (lower is better)
Translates to: SATPTWSMLQVPLGKSSARMRAF*MKAAPP
Trigger: TGGAGGAGCTGCCTTCATGCAGAACGCCCTCATCCG...GGCTGAGGATTTGCCAAGAGGTACTTGCAGCATGGACCAGGTTGGGGTTGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR GCA 90 bp AAGCCCACAAGGCTCACATGCCCGGGGTCCCATGTGCCTGGTCCTGTCACCTTTACCTTCTCCACCTTCTaGAACTCACATCCATCCCCT +
Preference number: 2 (lower is better)
Translates to: KPTRLTCPGSHVPGPVTFTFSTF*NSHPSP
Trigger: AGGGGATGGATGTGAGTTGCAGAAGGTGGAGAAGGT...AAAGGTGACAGGACCAGGCACATGGGACCCCGGGCATGTGAGCCTTGTGGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR CCA 90 bp TCCATGGTCCACCTGGACGTTGGCTACAGCTGCCTAACCTGTGGCTGCACCTTGTCAGCAACCCCAACCTaGTCCATGCTGCAAGTACCT +
Preference number: 2 (lower is better)
Translates to: SMVHLDVGYSCLTCGCTLSATPT*SMLQVP
Trigger: AGGTACTTGCAGCATGGACCAGGTTGGGGTTGCTGA...CAAGGTGCAGCCACAGGTTAGGCAGCTGTAGCCAACGTCCAGGTGGACCATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR CCA 90 bp TTGTTGATGCCCGGCTCTGTGCCCGACAAGATGGTAGCTGTGGAGACTGATCTGGCTGCATCTGAGTCTTaGGCTCCCGGTCCACTGCTT +
Preference number: 2 (lower is better)
Translates to: LLMPGSVPDKMVAVETDLAASES*APGPLL
Trigger: AAGCAGTGGACCGGGAGCCCAAGACTCAGATGCAGC...CAGATCAGTCTCCACAGCTACCATCTTGTCGGGCACAGAGCCGGGCATCAACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
3UTR CAA 90 bp CCAACAAACCCAGACAGGTACGGCCAGAGCACTGCTCCCAGGAATTaGGAGTTGATACCTGGGGACCACAACACGCACATCTGGGAACTG +
Preference number: 2 (lower is better)
Translates to: PTNPDRYGQSTAPRN*ELIPGDHNTHIWEL
Trigger: CAGTTCCCAGATGTGCGTGTTGTGGTCCCCAGGTATCAACTCCAAATTCCTGGGAGCAGTGCTCTGGCCGTACCTGTCTGGGTTTGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR-3UTR TCA 90 bp GAGGGACAAACTGTGACTGAGCCACAGGCTCACCTCAGCCAGTCAAAAGGACTTGCTATGAACTATCCCTaGTCTGCCCAGGGGAGGCGT +
Preference number: 2 (lower is better)
Translates to: EGQTVTEPQAHLSQSKGLAMNYP*SAQGRR
Trigger: ACGCCTCCCCTGGGCAGATCAGGGATAGTTCATAGC...AAGTCCTTTTGACTGGCTGAGGTGAGCCTGTGGCTCAGTCACAGTTTGTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR-3UTR GCA 90 bp TTAAGTACTTGCTGTAAGAGGCCTGACAACCCACCAGAAACAGATGCCCGCCTGCTTCTCTGGGACGGGTaGCACGGACCCACCTTCACT +
Preference number: 2 (lower is better)
Translates to: LSTCCKRPDNPPETDARLLLWDG*HGPTFT
Trigger: AGTGAAGGTGGGTCCGTGGCACCCGTCCCAGAGAAG...CAGGCGGGCATCTGTTTCTGGTGGGTTGTCAGGCCTCTTACAGCAAGTACTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR GCA 90 bp TTAAGTACTTGCTGTAAGAGGCCTGACAACCCACCAGAAACAGATGCCCGCCTGCTCCGCACACACAGGTaGCTTCTCAGGAGCACTGCC +
Preference number: 2 (lower is better)
Translates to: LSTCCKRPDNPPETDARLLRTHR*LLRSTA
Trigger: GGCAGTGCTCCTGAGAAGGCACCTGTGTGTGCGGAG...CAGGCGGGCATCTGTTTCTGGTGGGTTGTCAGGCCTCTTACAGCAAGTACTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR CCA 90 bp GTCCACCTGGACGTTGGCTACAGCTGCCTAACCTGTGGCTGCACCTTGGTCCACATTTGCAGGTTTCTGTaGCCTGAATACCCTCACCAC +
Preference number: 2 (lower is better)
Translates to: VHLDVGYSCLTCGCTLVHICRFL*PEYPHH
Trigger: GTGGTGAGGGTATTCAGGCCACAGAAACCTGCAAAT...GTGGACCAAGGTGCAGCCACAGGTTAGGCAGCTGTAGCCAACGTCCAGGTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR CCA 90 bp AAGCCCACAAGGCTCACATGCCCGGGGTCCCATGTGCCTGGTCCTGTCACCTTTTGGTGTGCAGGTGAATaGCTCAACAGCCTGAATTTC +
Preference number: 2 (lower is better)
Translates to: KPTRLTCPGSHVPGPVTFWCAGE*LNSLNF
Trigger: GAAATTCAGGCTGTTGAGCCATTCACCTGCACACCA...AAAGGTGACAGGACCAGGCACATGGGACCCCGGGCATGTGAGCCTTGTGGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR CCA 90 bp TCCCAAACACATGGGTTCACCCATCTCAGCGCATGCGCACTTGGCTGCAACAACCTGCTCTGCACTCAGTaGTGTGCAGGTGAATGGCTC +
Preference number: 2 (lower is better)
Translates to: SQTHGFTHLSACALGCNNLLCTQ*CAGEWL
Trigger: GAGCCATTCACCTGCACACCACTGAGTGCAGAGCAG...GTTGTTGCAGCCAAGTGCGCATGCGCTGAGATGGGTGAACCCATGTGTTTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR CCA 90 bp GGCTCCTCGCAGTTCCCAAACACATGGGTTCACCCATCTCAGCGCATGCGCACTGACCCCTCAGCAATGTaGTTTCTACGGACAGAAACC +
Preference number: 2 (lower is better)
Translates to: GSSQFPNTWVHPSQRMRTDPSAM*FLRTET
Trigger: GGTTTCTGTCCGTAGAAACCACATTGCTGAGGGGTC...AGTGCGCATGCGCTGAGATGGGTGAACCCATGTGTTTGGGAACTGCGAGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR CCA 90 bp CCAAGGAGCTGCTGTCTGGGAAATGCACTTATTAGGAGAGGGACAAACTGTGACCCTTCCAGGGCCAGCTaGGACCCTCTGGAACCCCAA +
Preference number: 2 (lower is better)
Translates to: PRSCCLGNALIRRGTNCDPSRAS*DPLEPQ
Trigger: TTGGGGTTCCAGAGGGTCCCAGCTGGCCCTGGAAGG...GTCACAGTTTGTCCCTCTCCTAATAAGTGCATTTCCCAGACAGCAGCTCCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR-3UTR CCA 90 bp CGCACACCCCATGCTCTCCTGGCTAAGCGGATTCAGCGCTGGCCAACAAACCCATTTGGAGTTGATACCTaGGGACCACAACACGCACAT +
Preference number: 2 (lower is better)
Translates to: RTPHALLAKRIQRWPTNPFGVDT*GPQHAH
Trigger: ATGTGCGTGTTGTGGTCCCCAGGTATCAACTCCAAA...TGGGTTTGTTGGCCAGCGCTGAATCCGCTTAGCCAGGAGAGCATGGGGTGTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR-3UTR GCA 90 bp TCTCTCTTCCGTCGCCCGCGGGCCCTGCTTCCTCCTCCAGTGTCGTTTCTCATGTATATCAAGCAGAGATaGAGGAAGCCTGTTTCTCTC +
Preference number: 2 (lower is better)
Translates to: SLFRRPRALLPPPVSFLMYIKQR*RKPVSL
Trigger: GAGAGAAACAGGCTTCCTGCATCTCTGCTTGATATA...CATGAGAAACGACACTGGAGGAGGAAGCAGGGCCCGCGGGCGACGGAAGAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR GCA 90 bp TTAAGTACTTGCTGTAAGAGGCCTGACAACCCACCAGAAACAGATGCCCGCCTGGACGTTGGCTACAGCTaGCTAACCTGTGGCTGCACC +
Preference number: 2 (lower is better)
Translates to: LSTCCKRPDNPPETDARLDVGYS*LTCGCT
Trigger: GGTGCAGCCACAGGTTAGGCAGCTGTAGCCAACGTC...CAGGCGGGCATCTGTTTCTGGTGGGTTGTCAGGCCTCTTACAGCAAGTACTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR CAA 90 bp TTCAGCATTTGCAGGTTTCTGTGGCCTGAATACCCTCACCACAGCTaGTGTCACCGCACACGGCATTGGGAAGACATGAGCACAGCTGCT +
Preference number: 2 (lower is better)
Translates to: FSICRFLWPEYPHHS*CHRTRHWEDMSTAA
Trigger: AGCAGCTGTGCTCATGTCTTCCCAATGCCGTGTGCGGTGACACAAGCTGTGGTGAGGGTATTCAGGCCACAGAAACCTGCAAATGCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR TCA 90 bp CCCTCAGCAATGTGGTTTCTACGGACAGAAACCACTCCCGACACTTACTCTGAAGGCATTGGGAAGACATaGGCACAGCTGCTCCAGCAC +
Preference number: 2 (lower is better)
Translates to: PSAMWFLRTETTPDTYSEGIGKT*AQLLQH
Trigger: GTGCTGGAGCAGCTGTGCTCATGTCTTCCCAATGCC...TTCAGAGTAAGTGTCGGGAGTGGTTTCTGTCCGTAGAAACCACATTGCTGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR TCA 90 bp TGTAACGTTGCATTTTCACATTTGTGTGGCAGGACAAGCATGGGGCAAGAGGGAATGCCATCCTCATCCTaGGCCCCTGGACTCCTGTCC +
Preference number: 2 (lower is better)
Translates to: CNVAFSHLCGRTSMGQEGMPSSS*APGLLS
Trigger: GGACAGGAGTCCAGGGGCTCAGGATGAGGATGGCAT...TCCCTCTTGCCCCATGCTTGTCCTGCCACACAAATGTGAAAATGCAACGTTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR-3UTR TCA 90 bp TATGAACTATCCCTGATCTGCCCAGGGGAGGCGTGTCTGACCCTTCACCATTGGCTCAGAGCCAACTATTaGGGACCTGGGAACTTATGG +
Preference number: 2 (lower is better)
Translates to: YELSLICPGEACLTLHHWLRANY*GPGNLW
Trigger: CCATAAGTTCCCAGGTCCTCAATAGTTGGCTCTGAG...CCAATGGTGAAGGGTCAGACACGCCTCCCCTGGGCAGATCAGGGATAGTTCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR-3UTR GCA 90 bp TCCAGGATCTATCTGCAGCTCTATGACGCATCTCACCGAGTATCTGGCTTCTTTTCCCCAGTGGTAGGCTaGACAGCCCACAGCACCATG +
Preference number: 2 (lower is better)
Translates to: SRIYLQLYDASHRVSGFFSPVVG*TAHSTM
Trigger: CATGGTGCTGTGGGCTGTGCAGCCTACCACTGGGGA...AAAGAAGCCAGATACTCGGTGAGATGCGTCATAGAGCTGCAGATAGATCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR GCA 90 bp AACCCCAACCTGGTCCATGCTGCAAGTACCTCTTGGCAAATCCTCAGCCACCCCTCTCCAGGATCTATCTaGAGCTCTATGACGCATCTC +
Preference number: 2 (lower is better)
Translates to: NPNLVHAASTSWQILSHPSPGSI*SSMTHL
Trigger: GAGATGCGTCATAGAGCTGCAGATAGATCCTGGAGA...GGGGTGGCTGAGGATTTGCCAAGAGGTACTTGCAGCATGGACCAGGTTGGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR GCA 90 bp TATGAACTATCCCTGATCTGCCCAGGGGAGGCGTGTCTGACCCTTCACCATTGGGGAGAGCTAAGGAAATaGTGGCGGTTGGAACCTGTT +
Preference number: 2 (lower is better)
Translates to: YELSLICPGEACLTLHHWGELRK*WRLEPV
Trigger: AACAGGTTCCAACCGCCAGCATTTCCTTAGCTCTCC...CCAATGGTGAAGGGTCAGACACGCCTCCCCTGGGCAGATCAGGGATAGTTCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR-3UTR CCA 90 bp TTAAGTACTTGCTGTAAGAGGCCTGACAACCCACCAGAAACAGATGCCCGCCTGTGGTCACGCTCCTGGTaGGCATCTGTACTCACTGTC +
Preference number: 2 (lower is better)
Translates to: LSTCCKRPDNPPETDARLWSRSW*ASVLTV
Trigger: GACAGTGAGTACAGATGCCCACCAGGAGCGTGACCA...CAGGCGGGCATCTGTTTCTGGTGGGTTGTCAGGCCTCTTACAGCAAGTACTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR CCA 90 bp CATCGGCCACTGAAGATCTCAGCTCTCGTCAGCCTTGCAAAGCTTGCTGCATCTGAGGAAAGCACAGCTTaGCCTGGTACTCACCAAGCT +
Preference number: 2 (lower is better)
Translates to: HRPLKISALVSLAKLAASEESTA*PGTHQA
Trigger: AGCTTGGTGAGTACCAGGCCAAGCTGTGCTTTCCTC...AGATGCAGCAAGCTTTGCAAGGCTGACGAGAGCTGAGATCTTCAGTGGCCGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR-3UTR CCA 90 bp AGACAGTTCCTCTTGACCTGGAATTGTCCAAGTCAGCACCACAGCTGGTTAAGGGTGGCAGGACAAGCATaGGGCAAGAGGGACGCGTTA +
Preference number: 2 (lower is better)
Translates to: RQFLLTWNCPSQHHSWLRVAGQA*GKRDAL
Trigger: TAACGCGTCCCTCTTGCCCCATGCTTGTCCTGCCAC...CCTTAACCAGCTGTGGTGCTGACTTGGACAATTCCAGGTCAAGAGGAACTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR-3UTR CCA 90 bp TTGATGCCCGGCTCTGTGCCCGACAAGATGGTAGCTGTGGAGACTGATCTGAAAGTGACAGGTGGAAGTTaGATGGGAACAACCCACCCA +
Preference number: 2 (lower is better)
Translates to: LMPGSVPDKMVAVETDLKVTGGS*MGTTHP
Trigger: TGGGTGGGTTGTTCCCATCCAACTTCCACCTGTCAC...TTTCAGATCAGTCTCCACAGCTACCATCTTGTCGGGCACAGAGCCGGGCATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
3UTR-3UTR TCA 90 bp TCAGCAACCCCAACCTGGTCCATGCTGCAAGTACCTCTTGGCAAATCCTCAGCCACACAACAGTTTGCATaGAAAGGATGCCCGGTGAAG +
Preference number: 2 (lower is better)
Translates to: SATPTWSMLQVPLGKSSATQQFA*KGCPVK
Trigger: CTTCACCGGGCATCCTTTTCATGCAAACTGTTGTGT...GGCTGAGGATTTGCCAAGAGGTACTTGCAGCATGGACCAGGTTGGGGTTGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR TCA 90 bp TCCAGGATCTATCTGCAGCTCTATGACGCATCTCACCGAGTATCTGGCTTCTTTAAGCCAACAGCTCCTTaGCGGATGAGGGCGTTCTGC +
Preference number: 2 (lower is better)
Translates to: SRIYLQLYDASHRVSGFFKPTAP*RMRAFC
Trigger: GCAGAACGCCCTCATCCGTCAAGGAGCTGTTGGCTT...AAAGAAGCCAGATACTCGGTGAGATGCGTCATAGAGCTGCAGATAGATCCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR GCA 90 bp TGCTGCAAGTACCTCTTGGCAAATCCTCAGCCACCCCCACCTGGTCCACGCTGCTCCGGAAACTTAGACTaGACATGCATTTCTGCATAT +
Preference number: 2 (lower is better)
Translates to: CCKYLLANPQPPPPGPRCSGNLD*TCISAY
Trigger: ATATGCAGAAATGCATGTGCAGTCTAAGTTTCCGGA...GCAGCGTGGACCAGGTGGGGGTGGCTGAGGATTTGCCAAGAGGTACTTGCAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR TCA 90 bp CCCTCAGCAATGTGGTTTCTACGGACAGAAACCACTCCCGACACTTACTCTGAACAGGTTTCTGTGGCCTaGATACCCTCACCACAGCTT +
Preference number: 2 (lower is better)
Translates to: PSAMWFLRTETTPDTYSEQVSVA*IPSPQL
Trigger: AAGCTGTGGTGAGGGTATTCAGGCCACAGAAACCTG...TTCAGAGTAAGTGTCGGGAGTGGTTTCTGTCCGTAGAAACCACATTGCTGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR TCA 90 bp TTGTTGATGCCCGGCTCTGTGCCCGACAAGATGGTAGCTGTGGAGACTGATCTGCACCTTGGGCTAAGATaGTGTGATTCTTCCAAGGTT +
Preference number: 2 (lower is better)
Translates to: LLMPGSVPDKMVAVETDLHLGLR*CDSSKV
Trigger: AACCTTGGAAGAATCACATCATCTTAGCCCAAGGTG...CAGATCAGTCTCCACAGCTACCATCTTGTCGGGCACAGAGCCGGGCATCAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR-3UTR GCA 90 bp AACCCCAACCTGGTCCATGCTGCAAGTACCTCTTGGCAAATCCTCAGCCACCCCCTGATTTTCAGCATTTaGAGGTTTCTGTGGCCTGAA +
Preference number: 2 (lower is better)
Translates to: NPNLVHAASTSWQILSHPLIFSI*RFLWPE
Trigger: TTCAGGCCACAGAAACCTGCAAATGCTGAAAATCAG...GGGGTGGCTGAGGATTTGCCAAGAGGTACTTGCAGCATGGACCAGGTTGGGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR CCA 90 bp GGCTCCTCGCAGTTCCCAAACACATGGGTTCACCCATCTCAGCGCATGCGCACTGGCATCATCATACCGTaGTTATGTAACTGTTTGCTA +
Preference number: 2 (lower is better)
Translates to: GSSQFPNTWVHPSQRMRTGIIIP*LCNCLL
Trigger: TAGCAAACAGTTACATAACCACGGTATGATGATGCC...AGTGCGCATGCGCTGAGATGGGTGAACCCATGTGTTTGGGAACTGCGAGGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR CCA 90 bp CTCCCGGTCCACTGCTTAAAAAGTTACTATCACACAAAGTCGAAAGTAGACAGTCCAGCTGGGACCCTCTaGAACCCCAACCCGAGCTGT +
Preference number: 2 (lower is better)
Translates to: LPVHCLKSYYHTKSKVDSPAGTL*NPNPSC
Trigger: ACAGCTCGGGTTGGGGTTCCAGAGGGTCCCAGCTGG...ACTGTCTACTTTCGACTTTGTGTGATAGTAACTTTTTAAGCAGTGGACCGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR-3UTR TCA 90 bp ATACGCTGTGGTCTCATGCAGCACAGAGAACCTAGGGAAATTATCCTAATTAATACATGGAACTGTGGCTaGCGGCCTGCCCAGAGGGTG +
Preference number: 2 (lower is better)
Translates to: IRCGLMQHREPREIILINTWNCG*RPAQRV
Trigger: CACCCTCTGGGCAGGCCGTCAGCCACAGTTCCATGT...ATTAATTAGGATAATTTCCCTAGGTTCTCTGTGCTGCATGAGACCACAGCGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR-3UTR TCA 90 bp CTGAAGATCTCAGCTCTCGTCAGCCTTGCAAAGCTTGCTGCATCTGAGTCTTGGGTAGACAGTTCCTCTTaGCCTGGAATTGTCCAAGTC +
Preference number: 2 (lower is better)
Translates to: LKISALVSLAKLAASESWVDSSS*PGIVQV
Trigger: GACTTGGACAATTCCAGGTCAAGAGGAACTGTCTAC...CCAAGACTCAGATGCAGCAAGCTTTGCAAGGCTGACGAGAGCTGAGATCTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
3UTR-3UTR GCA 90 bp TTAAGTACTTGCTGTAAGAGGCCTGACAACCCACCAGAAACAGATGCCCGCCTGAGACATGAGCACAGCTaGTCCAGCACACAACAGTTT +
Preference number: 2 (lower is better)
Translates to: LSTCCKRPDNPPETDARLRHEHS*SSTQQF
Trigger: AAACTGTTGTGTGCTGGAGCAGCTGTGCTCATGTCT...CAGGCGGGCATCTGTTTCTGGTGGGTTGTCAGGCCTCTTACAGCAAGTACTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR GCA 90 bp ACCATTGGAAATCAACTTAATGGACTGTCCTGGAAAGGTAGTCAGTCTAGTCTACCCCAACCCGAGCTGTaGCGTGGAGGAGGAAAGCAC +
Preference number: 2 (lower is better)
Translates to: TIGNQLNGLSWKGSQSSLPQPEL*RGGGKH
Trigger: GTGCTTTCCTCCTCCACGGCACAGCTCGGGTTGGGG...TAGACTAGACTGACTACCTTTCCAGGACAGTCCATTAAGTTGATTTCCAATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR CAA 90 bp TGGTTATGTAACTGTTTGCTACCTGGCTTCTCTAACATGCTGGTCTaGACCCCTCAGCAATGTGGTTTCTACGGACAGAAACCACTCCCG +
Preference number: 2 (lower is better)
Translates to: WLCNCLLPGFSNMLV*TPQQCGFYGQKPLP
Trigger: CGGGAGTGGTTTCTGTCCGTAGAAACCACATTGCTGAGGGGTCAAGACCAGCATGTTAGAGAAGCCAGGTAGCAAACAGTTACATAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR TCA 90 bp TCAGCAACCCCAACCTGGTCCATGCTGCAAGTACCTCTTGGCAAATCCTCAGCCAATGGCTCAACAGCCTaGATTTCTGATTTTCAGCAT +
Preference number: 2 (lower is better)
Translates to: SATPTWSMLQVPLGKSSANGSTA*ISDFQH
Trigger: ATGCTGAAAATCAGAAATTCAGGCTGTTGAGCCATT...GGCTGAGGATTTGCCAAGAGGTACTTGCAGCATGGACCAGGTTGGGGTTGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR CCA 90 bp ACCATTGGAAATCAACTTAATGGACTGTCCTGGAAAGGTAGTCAGTCTAGTCTACGGGTCTGCAGGAGCTaGGGTGGGGTCATTGTGAGT +
Preference number: 2 (lower is better)
Translates to: TIGNQLNGLSWKGSQSSLRVCRS*GGVIVS
Trigger: ACTCACAATGACCCCACCCCAGCTCCTGCAGACCCG...TAGACTAGACTGACTACCTTTCCAGGACAGTCCATTAAGTTGATTTCCAATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR-3UTR CCA 90 bp GAAGGCTCAGACAATGGCAGTGTTGATTACGGAGGTGATGGCTGCAGCTGCAGAGCAATGATGTATGTGTaGAGCGCAGTCATGTTCTTT +
Preference number: 2 (lower is better)
Translates to: EGSDNGSVDYGGDGCSCRAMMYV*SAVMFF
Trigger: AAAGAACATGACTGCGCTCCACACATACATCATTGC...TCTGCAGCTGCAGCCATCACCTCCGTAATCAACACTGCCATTGTCTGAGCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR-3UTR GCA 90 bp GTAGATTGCCTTTTTCTTGAAAATGTAGACGTTTGGGAACTGTTGGAGACACACGCCCAGTGCACCTGCTaGAGGTACAAAGGTGAGCAC +
Preference number: 2 (lower is better)
Translates to: VDCLFLENVDVWELLETHAQCTC*RYKGEH
Trigger: GTGCTCACCTTTGTACCTGCAGCAGGTGCACTGGGC...GTGTGTCTCCAACAGTTCCCAAACGTCTACATTTTCAAGAAAAAGGCAATCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR-3UTR CCA 90 bp TTCTATCAGTGGCTTAACATAAATGTCTGTGTACACAAAACCTGTCTGATGATTCTCCTCGCGGTGACCTaGTCCTCCCAGTGCCTCACC +
Preference number: 2 (lower is better)
Translates to: FYQWLNINVCVHKTCLMILLAVT*SSQCLT
Trigger: GGTGAGGCACTGGGAGGACCAGGTCACCGCGAGGAG...AATCATCAGACAGGTTTTGTGTACACAGACATTTATGTTAAGCCACTGATAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR CAA 90 bp GATGTAGATTGCCTTTTTCTTGAAAATGTAGACGTTTGGGAACTGTaGGAGACACACACACATTCTCAGCCCATCACTCCGCCCTGTCAC +
Preference number: 2 (lower is better)
Translates to: DVDCLFLENVDVWEL*ETHTHSQPITPPCH
Trigger: GTGACAGGGCGGAGTGATGGGCTGAGAATGTGTGTGTGTCTCCAACAGTTCCCAAACGTCTACATTTTCAAGAAAAAGGCAATCTACATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR-3UTR GCA 90 bp TTCTATCAGTGGCTTAACATAAATGTCTGTGTACACAAAACCTGTCTGATGATTCGGGCTCCTCCCATGTaGCTGGCCCTGTCACCTCTT +
Preference number: 2 (lower is better)
Translates to: FYQWLNINVCVHKTCLMIRAPPM*LALSPL
Trigger: AAGAGGTGACAGGGCCAGGCACATGGGAGGAGCCCG...AATCATCAGACAGGTTTTGTGTACACAGACATTTATGTTAAGCCACTGATAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR CCA 90 bp ACACAGTTCCCTCCGAGAAGTGATGCTCTGCCGGGGAATAATTTTATTATGAATACCAAGCTCTCGTCATaGTGTCCGACACTCCCTTCT +
Preference number: 2 (lower is better)
Translates to: TQFPPRSDALPGNNFIMNTKLSS*CPTLPS
Trigger: AGAAGGGAGTGTCGGACACCATGACGAGAGCTTGGT...ATTCATAATAAAATTATTCCCCGGCAGAGCATCACTTCTCGGAGGGAACTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR-3UTR CCA 90 bp ACCATTGGAAATCAACTTAATGGACTGTCCTGGAAAGGTAGTCAGTCTAGTCTAAAGCGGATTCAGCGCTaGCCAACAAACCCAGACAGG +
Preference number: 2 (lower is better)
Translates to: TIGNQLNGLSWKGSQSSLKRIQR*PTNPDR
Trigger: CCTGTCTGGGTTTGTTGGCCAGCGCTGAATCCGCTT...TAGACTAGACTGACTACCTTTCCAGGACAGTCCATTAAGTTGATTTCCAATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR-3UTR CCA 90 bp ATCAATTCATTCTTTATTCAACATACACTTGTTGATGCCCGGCTCTGTGCCCGATCATTCAAGCCACCTTaGAGCAGACGTGGCTACGCT +
Preference number: 2 (lower is better)
Translates to: INSFFIQHTLVDARLCARSFKPP*SRRGYA
Trigger: AGCGTAGCCACGTCTGCTCCAAGGTGGCTTGAATGA...TCGGGCACAGAGCCGGGCATCAACAAGTGTATGTTGAATAAAGAATGAATTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
3UTR-3UTR CCA 90 bp TTAAGTACTTGCTGTAAGAGGCCTGACAACCCACCAGAAACAGATGCCCGCCTGAAACTTAGGAAAATTTaGCTCCAAGAGTTGACAGCT +
Preference number: 2 (lower is better)
Translates to: LSTCCKRPDNPPETDARLKLRKI*LQELTA
Trigger: AGCTGTCAACTCTTGGAGCCAAATTTTCCTAAGTTT...CAGGCGGGCATCTGTTTCTGGTGGGTTGTCAGGCCTCTTACAGCAAGTACTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR CCA 90 bp TCATTCTTTATTCAACATACACTTGTTGATGCCCGGCTCTGTGCCCGACAAGATGAGCTAAGGAAATGCTaGCGGTTGGAACCTGTTCAT +
Preference number: 2 (lower is better)
Translates to: SFFIQHTLVDARLCARQDELRKC*RLEPVH
Trigger: ATGAACAGGTTCCAACCGCCAGCATTTCCTTAGCTC...ATCTTGTCGGGCACAGAGCCGGGCATCAACAAGTGTATGTTGAATAAAGAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR-3UTR TCA 90 bp TCCAGGATCTATCTGCAGCTCTATGACGCATCTCACCGAGTATCTGGCTTCTTTAACAGCCTGAATTTCTaGTTTTCAGCATTTGCAGGT +
Preference number: 2 (lower is better)
Translates to: SRIYLQLYDASHRVSGFFNSLNF*FSAFAG
Trigger: ACCTGCAAATGCTGAAAATCAGAAATTCAGGCTGTT...AAAGAAGCCAGATACTCGGTGAGATGCGTCATAGAGCTGCAGATAGATCCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR GCA 90 bp ATTGATCCACAGATGTGTGCCGATTGCTGGGATAAAGAGATAACTAAGATTAGTGTACGGCCAGAGCACTaGTCCCAGGAATTTGGAGTT +
Preference number: 2 (lower is better)
Translates to: IDPQMCADCWDKEITKISVRPEH*SQEFGV
Trigger: AACTCCAAATTCCTGGGAGCAGTGCTCTGGCCGTAC...ACTAATCTTAGTTATCTCTTTATCCCAGCAATCGGCACACATCTGTGGATCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR-3UTR CCA 90 bp TTCTATCAGTGGCTTAACATAAATGTCTGTGTACACAAAACCTGTCTGATGATTCAGCGCATGCGCACTTaGCTGCAACAACACCCTCCT +
Preference number: 2 (lower is better)
Translates to: FYQWLNINVCVHKTCLMIQRMRT*LQQHPP
Trigger: AGGAGGGTGTTGTTGCAGCCAAGTGCGCATGCGCTG...AATCATCAGACAGGTTTTGTGTACACAGACATTTATGTTAAGCCACTGATAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR CCA 90 bp CTGAAGATCTCAGCTCTCGTCAGCCTTGCAAAGCTTGCTGCATCTGAGTCTTGGTTCTTCCAAGGTTTGTaGCAGAAATCCCATTTAATA +
Preference number: 2 (lower is better)
Translates to: LKISALVSLAKLAASESWFFQGL*QKSHLI
Trigger: TATTAAATGGGATTTCTGCCACAAACCTTGGAAGAA...CCAAGACTCAGATGCAGCAAGCTTTGCAAGGCTGACGAGAGCTGAGATCTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR-3UTR CCA 90 bp TTCTATCAGTGGCTTAACATAAATGTCTGTGTACACAAAACCTGTCTGATGATTCACCGCACACGGCATTaGGAAGACATGAGCACAGCT +
Preference number: 2 (lower is better)
Translates to: FYQWLNINVCVHKTCLMIHRTRH*EDMSTA
Trigger: AGCTGTGCTCATGTCTTCCCAATGCCGTGTGCGGTG...AATCATCAGACAGGTTTTGTGTACACAGACATTTATGTTAAGCCACTGATAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR CCA 90 bp ATCAATTCATTCTTTATTCAACATACACTTGTTGATGCCCGGCTCTGTGCCCGAATTTTCACATTTGTGTaGCAGGACAAGCATGGGGCA +
Preference number: 2 (lower is better)
Translates to: INSFFIQHTLVDARLCARIFTFV*QDKHGA
Trigger: TGCCCCATGCTTGTCCTGCCACACAAATGTGAAAAT...TCGGGCACAGAGCCGGGCATCAACAAGTGTATGTTGAATAAAGAATGAATTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR-3UTR GCA 90 bp TGTATGTGTGGAGCGCAGTCATGTTCTTTGTTACGCAACACAGTTTTCACCTTGCGAGAAGTGATGCTCTaGCGGGGAATAATTTTATTA +
Preference number: 2 (lower is better)
Translates to: CMCGAQSCSLLRNTVFTLREVML*RGIILL
Trigger: TAATAAAATTATTCCCCGGCAGAGCATCACTTCTCG...CAAGGTGAAAACTGTGTTGCGTAACAAAGAACATGACTGCGCTCCACACATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR-3UTR CCA 90 bp ATTGATCCACAGATGTGTGCCGATTGCTGGGATAAAGAGATAACTAAGATTAGTTCCACACACCCTCCCTaGCCTTCTGTGTTGAATTTT +
Preference number: 2 (lower is better)
Translates to: IDPQMCADCWDKEITKISSTHPP*PSVLNF
Trigger: AAAATTCAACACAGAAGGCCAGGGAGGGTGTGTGGA...ACTAATCTTAGTTATCTCTTTATCCCAGCAATCGGCACACATCTGTGGATCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR-3UTR CCA 90 bp ATTGATCCACAGATGTGTGCCGATTGCTGGGATAAAGAGATAACTAAGATTAGTTCACTGCAGCAAGTATaGCTTAAACCTGCTTCTGAA +
Preference number: 2 (lower is better)
Translates to: IDPQMCADCWDKEITKISSLQQV*LKPASE
Trigger: TTCAGAAGCAGGTTTAAGCCATACTTGCTGCAGTGA...ACTAATCTTAGTTATCTCTTTATCCCAGCAATCGGCACACATCTGTGGATCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR GCA 72 bp CCAGGTGTGGGCGGCCGCCGTCCAGAGAGAAACTCCTaGCACGTGTGTGAGGCTGACCGAACCCCGCACACC +
Preference number: 3 (lower is better)
Translates to: PGVGGRRPERNS*HVCEADRTPHT
Trigger: GGTGTGCGGGGTTCGGTCAGCCTCACACACGTGGCAGGAGTTTCTCTCTGGACGGCGGCCGCCCACACCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR CCA 72 bp TCACTCAATGCCTCTCGCCCTGTCACGTGCATCCCCTaGTCCAGCCACCGGGCTCCTCCCATGTGCCTGGCC +
Preference number: 3 (lower is better)
Translates to: SLNASRPVTCIP*SSHRAPPMCLA
Trigger: GGCCAGGCACATGGGAGGAGCCCGGTGGCTGGACCAGGGGATGCACGTGACAGGGCGAGAGGCATTGAGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR CCA 72 bp AGAGGCCTGACAACCCACCAGAAACAGATGCCCGCCTaGGGCCAACGCCGCCCTCTCCGCACACACAGGTGC +
Preference number: 3 (lower is better)
Translates to: RGLTTHQKQMPA*GQRRPLRTHRC
Trigger: GCACCTGTGTGTGCGGAGAGGGCGGCGTTGGCCCCAGGCGGGCATCTGTTTCTGGTGGGTTGTCAGGCCTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR GCA 72 bp TCCTCCTCTGGGACGCCAGCCCTGGGCCAGGTGGGCTaGTCTGCACTCAGTGGTGTGCAGGTGAATGGCTCA +
Preference number: 3 (lower is better)
Translates to: SSSGTPALGQVG*SALSGVQVNGS
Trigger: TGAGCCATTCACCTGCACACCACTGAGTGCAGAGCAGCCCACCTGGCCCAGGGCTGGCGTCCCAGAGGAGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR GCA 72 bp GCCAGCTGGGACCCTCTGGAACCCCAACCCGAGCTGTaGCGTGGAGGAGGAAAGCACAGCTTGGCCTGGTAC +
Preference number: 3 (lower is better)
Translates to: ASWDPLEPQPEL*RGGGKHSLAWY
Trigger: GTACCAGGCCAAGCTGTGCTTTCCTCCTCCACGGCACAGCTCGGGTTGGGGTTCCAGAGGGTCCCAGCTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR-3UTR CAA 90 bp AAGCCCACAAGGCTCACATGCCCGGGGTCCCATGTGCCTGGTCCTGTCACCTTTGCTGTGACTCCAGCCTaGTGGTCCCTGCAGCCCCCG +
Preference number: 3 (lower is better)
Translates to: KPTRLTCPGSHVPGPVTFAVTPA*WSLQPP
Trigger: CGGGGGCTGCAGGGACCACAAGGCTGGAGTCACAGC...AAAGGTGACAGGACCAGGCACATGGGACCCCGGGCATGTGAGCCTTGTGGGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR CCA 72 bp GGTCCACCTGGACGTTGGCTACAGCTGCCTAACCTGTaGCTGCACCTTGGTCCACGCTGCAGGCCCCTCTCA +
Preference number: 3 (lower is better)
Translates to: GPPGRWLQLPNL*LHLGPRCRPLS
Trigger: TGAGAGGGGCCTGCAGCGTGGACCAAGGTGCAGCCACAGGTTAGGCAGCTGTAGCCAACGTCCAGGTGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR CCA 72 bp CTCCCAGTGCCTCACCGGCCACTCGGCAGCTCCCACTaGTTCTACCTCCATGGTCCACCTGGACGTTGGCTA +
Preference number: 3 (lower is better)
Translates to: LPVPHRPLGSSH*FYLHGPPGRWL
Trigger: TAGCCAACGTCCAGGTGGACCATGGAGGTAGAACCAGTGGGAGCTGCCGAGTGGCCGGTGAGGCACTGGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR CCA 72 bp GCCCTCTTGAGCCTCAGCTGGAACCTGAGGTCTGACTaGCACCTGCATAGCTGCCCAGCACTGCGCTCTGGG +
Preference number: 3 (lower is better)
Translates to: ALLSLSWNLRSD*HLHSCPALRSG
Trigger: CCCAGAGCGCAGTGCTGGGCAGCTATGCAGGTGCCAGTCAGACCTCAGGTTCCAGCTGAGGCTCAAGAGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR CAA 90 bp CTCTCCTCCCTGCACTCCGGGCCTTATGGCCCTCTTGAGCCTCAGCTGGAACCTTCAGCGCATGCGCACTaGGCTGCAACAACACCCTCC +
Preference number: 3 (lower is better)
Translates to: LSSLHSGPYGPLEPQLEPSAHAH*AATTPS
Trigger: GGAGGGTGTTGTTGCAGCCAAGTGCGCATGCGCTGA...AGGTTCCAGCTGAGGCTCAAGAGGGCCATAAGGCCCGGAGTGCAGGGAGGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR GCA 72 bp TTGTCTCCTGAGCCACGTCCTAGCCTCTGCCGGGTCTaGAGGAGCTGGGGTGGGGTCATTGTGAGTGGGTTC +
Preference number: 3 (lower is better)
Translates to: LSPEPRPSLCRV*RSWGGVIVSGF
Trigger: GAACCCACTCACAATGACCCCACCCCAGCTCCTGCAGACCCGGCAGAGGCTAGGACGTGGCTCAGGAGACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR CCA 72 bp GTCCAGCCACCGGGCTCCTCGCAGTTCCCAAACACATaGGTTCACCCATCTCAGCGCATGCGCACTTGGCTG +
Preference number: 3 (lower is better)
Translates to: VQPPGSSQFPNT*VHPSQRMRTWL
Trigger: CAGCCAAGTGCGCATGCGCTGAGATGGGTGAACCCATGTGTTTGGGAACTGCGAGGAGCCCGGTGGCTGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR CCA 72 bp CGCGGGCCCTGCTTCCTCCTCCAGTGTCGTTTCTCATaGTCCCTGGTCACGCTCCTGGTGGGCATCTGTACT +
Preference number: 3 (lower is better)
Translates to: RGPCFLLQCRFS*SLVTLLVGICT
Trigger: AGTACAGATGCCCACCAGGAGCGTGACCAGGGACCATGAGAAACGACACTGGAGGAGGAAGCAGGGCCCGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR CCA 72 bp AGAGTAAGGTACCTTCCAGGGCCAGCTGGGACCCTCTaGAACCCCAACCCGAGCTGTGCCGTGGAGGAGGAA +
Preference number: 3 (lower is better)
Translates to: RVRYLPGPAGTL*NPNPSCAVEEE
Trigger: TTCCTCCTCCACGGCACAGCTCGGGTTGGGGTTCCAGAGGGTCCCAGCTGGCCCTGGAAGGTACCTTACTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR CCA 72 bp TGCCCAGAGGGTGGCCTGCCTAGAGGGTGTTCCAGCTaGCGTCTGTCTCTCATCGCGATGCCATCCTCATCC +
Preference number: 3 (lower is better)
Translates to: CPEGGLPRGCSS*RLSLIAMPSSS
Trigger: GGATGAGGATGGCATCGCGATGAGAGACAGACGCCAGCTGGAACACCCTCTAGGCAGGCCACCCTCTGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR TCA 72 bp GTCACGCTCCTGGTGGGCATCTGTACTCACTGTCCCTaGTCTCTCTCCTCCCTGCACTCCGGGCCTTATGGC +
Preference number: 3 (lower is better)
Translates to: VTLLVGICTHCP*SLSSLHSGPYG
Trigger: GCCATAAGGCCCGGAGTGCAGGGAGGAGAGAGATCAGGGACAGTGAGTACAGATGCCCACCAGGAGCGTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR CCA 72 bp TGCACTCCGGGCCTTATGGCCCTCTTGAGCCTCAGCTaGAACCTGAGGTCTGACTGGCACCTGCATAGCTGC +
Preference number: 3 (lower is better)
Translates to: CTPGLMALLSLS*NLRSDWHLHSC
Trigger: GCAGCTATGCAGGTGCCAGTCAGACCTCAGGTTCCAGCTGAGGCTCAAGAGGGCCATAAGGCCCGGAGTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR CCA 72 bp GCACAGCTTGGCCTGGTACTCACCAAGCTCTCGTCATaGTGTCCGACACTCCCTTCTGTCTCCTCGGAGGGC +
Preference number: 3 (lower is better)
Translates to: AQLGLVLTKLSS*CPTLPSVSSEG
Trigger: GCCCTCCGAGGAGACAGAAGGGAGTGTCGGACACCATGACGAGAGCTTGGTGAGTACCAGGCCAAGCTGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR-3UTR CAA 90 bp CCGTCGTTGACTTGTGTCCCGCCTCGCCGGGCAATGATGTATGTGTGGAGCGCAGGAGGAAAGCACAGCTaGGCCTGGTACTCACCAAGC +
Preference number: 3 (lower is better)
Translates to: PSLTCVPPRRAMMYVWSAGGKHS*AWYSPS
Trigger: GCTTGGTGAGTACCAGGCCAAGCTGTGCTTTCCTCC...TGCGCTCCACACATACATCATTGCCCGGCGAGGCGGGACACAAGTCAACGACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR GCA 72 bp GCGTTCTGCATGAAGGCAGCTCCTCCAGCACCCATATaGTCTGCACGCTGTGACTCCAGCCTTGTGGTCCCT +
Preference number: 3 (lower is better)
Translates to: AFCMKAAPPAPI*SARCDSSLVVP
Trigger: AGGGACCACAAGGCTGGAGTCACAGCGTGCAGAGCATATGGGTGCTGGAGGAGCTGCCTTCATGCAGAACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR GCA 72 bp TCTACCTCCATGGTCCACCTGGACGTTGGCTACAGCTaGCTAACCTGTGGCTGCACCTTGGTCCACGCTGCA +
Preference number: 3 (lower is better)
Translates to: STSMVHLDVGYS*LTCGCTLVHAA
Trigger: TGCAGCGTGGACCAAGGTGCAGCCACAGGTTAGGCAGCTGTAGCCAACGTCCAGGTGGACCATGGAGGTAGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR GCA 72 bp GTGCCTGGGGTGGCTGTCATCTCTACGAGGCCTGGGTaGACTGACACCATTCCTGCAAAGGGAAGGCTCAGA +
Preference number: 3 (lower is better)
Translates to: VPGVAVISTRPG*TDTIPAKGRLR
Trigger: TCTGAGCCTTCCCTTTGCAGGAATGGTGTCAGTGCACCCAGGCCTCGTAGAGATGACAGCCACCCCAGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR CCA 72 bp AGCAACCCCAACCTGGTCCATGCTGCAAGTACCTCTTaGCAAATCCTCAGCCACCCCCACCTGGTCCACGCT +
Preference number: 3 (lower is better)
Translates to: SNPNLVHAASTS*QILSHPHLVHA
Trigger: AGCGTGGACCAGGTGGGGGTGGCTGAGGATTTGCCAAGAGGTACTTGCAGCATGGACCAGGTTGGGGTTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR CCA 72 bp AACCCGAGCTGTGCCGTGGAGGAGGAAAGCACAGCTTaGCCTGGTACTCACCAAGCTCTCGTCATGGTGTCC +
Preference number: 3 (lower is better)
Translates to: NPSCAVEEESTA*PGTHQALVMVS
Trigger: GGACACCATGACGAGAGCTTGGTGAGTACCAGGCCAAGCTGTGCTTTCCTCCTCCACGGCACAGCTCGGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR CCA 72 bp ACACCCCATGCTCTCCTGGCTAAGCGGATTCAGCGCTaGCCAACAAACCCAGACAGGTACGGCCAGAGCACT +
Preference number: 3 (lower is better)
Translates to: TPHALLAKRIQR*PTNPDRYGQST
Trigger: AGTGCTCTGGCCGTACCTGTCTGGGTTTGTTGGCCAGCGCTGAATCCGCTTAGCCAGGAGAGCATGGGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR TCA 72 bp TGGCGTCTGTCTCTCATCGCGATGCCATCCTCATCCTaGGCCCCTGGACTCCTGTCCTGTCTCTCAGTTGCA +
Preference number: 3 (lower is better)
Translates to: WRLSLIAMPSSS*APGLLSCLSVA
Trigger: TGCAACTGAGAGACAGGACAGGAGTCCAGGGGCTCAGGATGAGGATGGCATCGCGATGAGAGACAGACGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR CCA 72 bp TCCCACTGGTTCTACCTCCATGGTCCACCTGGACGTTaGCTACAGCTGCCTAACCTGTGGCTGCACCTTGGT +
Preference number: 3 (lower is better)
Translates to: SHWFYLHGPPGR*LQLPNLWLHLG
Trigger: ACCAAGGTGCAGCCACAGGTTAGGCAGCTGTAGCCAACGTCCAGGTGGACCATGGAGGTAGAACCAGTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR CAA 90 bp TCCATGGTCCACCTGGACGTTGGCTACAGCTGCCTAACCTGTGGCTGCACCTTGATTTGGCTCCAAGAGTaGACAGCTCCCAAGTCCGGA +
Preference number: 3 (lower is better)
Translates to: SMVHLDVGYSCLTCGCTLIWLQE*TAPKSG
Trigger: TCCGGACTTGGGAGCTGTCAACTCTTGGAGCCAAAT...CAAGGTGCAGCCACAGGTTAGGCAGCTGTAGCCAACGTCCAGGTGGACCATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR CAA 90 bp TCAGCAACCCCAACCTGGTCCATGCTGCAAGTACCTCTTGGCAAATCCTCAGCCTCACCGCACACGGCATaGGGAAGACATGAGCACAGC +
Preference number: 3 (lower is better)
Translates to: SATPTWSMLQVPLGKSSASPHTA*GRHEHS
Trigger: GCTGTGCTCATGTCTTCCCAATGCCGTGTGCGGTGA...GGCTGAGGATTTGCCAAGAGGTACTTGCAGCATGGACCAGGTTGGGGTTGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR CAA 90 bp TTGTTGATGCCCGGCTCTGTGCCCGACAAGATGGTAGCTGTGGAGACTGATCTGCTCATTCAAGCCACCTaGGAGCAGACGTGGCTACGC +
Preference number: 3 (lower is better)
Translates to: LLMPGSVPDKMVAVETDLLIQAT*EQTWLR
Trigger: GCGTAGCCACGTCTGCTCCAAGGTGGCTTGAATGAG...CAGATCAGTCTCCACAGCTACCATCTTGTCGGGCACAGAGCCGGGCATCAACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
3UTR TCA 72 bp TGGGGTGGCTGTCATCTCTACGAGGCCTGGGTGCACTaGCACCATTCCTGCAAAGGGAAGGCTCAGACAATG +
Preference number: 3 (lower is better)
Translates to: WGGCHLYEAWVH*HHSCKGKAQTM
Trigger: CATTGTCTGAGCCTTCCCTTTGCAGGAATGGTGTCAGTGCACCCAGGCCTCGTAGAGATGACAGCCACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR GCA 72 bp AGTTCCCAAACACATGGGTTCACCCATCTCAGCGCATaGGCACTTGGCTGCAACAACACCCTCCTCTTCCCG +
Preference number: 3 (lower is better)
Translates to: SSQTHGFTHLSA*ALGCNNTLLFP
Trigger: CGGGAAGAGGAGGGTGTTGTTGCAGCCAAGTGCGCATGCGCTGAGATGGGTGAACCCATGTGTTTGGGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR GCA 72 bp CTGGCCAACAAACCCAGACAGGTACGGCCAGAGCACTaGTCCCAGGAATTTGGAGTTGATACCTGGGGACCA +
Preference number: 3 (lower is better)
Translates to: LANKPRQVRPEH*SQEFGVDTWGP
Trigger: TGGTCCCCAGGTATCAACTCCAAATTCCTGGGAGCAGTGCTCTGGCCGTACCTGTCTGGGTTTGTTGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR GCA 72 bp CAGGCTCACCTCAGCCAGTCAAAAGGACTTGGGCACTaGCTCATTCAAGCCACCTTGGAGCAGACGTGGCTA +
Preference number: 3 (lower is better)
Translates to: QAHLSQSKGLGH*LIQATLEQTWL
Trigger: TAGCCACGTCTGCTCCAAGGTGGCTTGAATGAGGCAGTGCCCAAGTCCTTTTGACTGGCTGAGGTGAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
3UTR CCA 72 bp AATGACCTTGTCAAGGTCCTCCTAAACATGGAACTGTaGCTGACGGCCTGCCCAGAGGGTGGCCTGCCTAGA +
Preference number: 3 (lower is better)
Translates to: NDLVKVLLNMEL*LTACPEGGLPR
Trigger: TCTAGGCAGGCCACCCTCTGGGCAGGCCGTCAGCCACAGTTCCATGTTTAGGAGGACCTTGACAAGGTCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR-3UTR CAA 90 bp TCCATGCTGCAAGTACCTCTTGGCAAATCCTCAGCCACCCCCACCTGGTCCACGTCTAACATGCTGGTCTaGACCCCTCAGCAATGTGGT +
Preference number: 3 (lower is better)
Translates to: SMLQVPLGKSSATPTWSTSNMLV*TPQQCG
Trigger: ACCACATTGCTGAGGGGTCAAGACCAGCATGTTAGA...CGTGGACCAGGTGGGGGTGGCTGAGGATTTGCCAAGAGGTACTTGCAGCATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR GCA 72 bp GGTGATGGCTGCAGCTGCAGACAGCTATTTGGCAAATaGTATGAACTATCCCTGATCTGCCCAGGGGAGGCG +
Preference number: 3 (lower is better)
Translates to: GDGCSCRQLFGK*YELSLICPGEA
Trigger: CGCCTCCCCTGGGCAGATCAGGGATAGTTCATAGCATTTGCCAAATAGCTGTCTGCAGCTGCAGCCATCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR-3UTR CAA 90 bp TTAAGTACTTGCTGTAAGAGGCCTGACAACCCACCAGAAACAGATGCCCGCCTGTACCCTCACCACAGCTaGTGTCACCGCACACGGCAT +
Preference number: 3 (lower is better)
Translates to: LSTCCKRPDNPPETDARLYPHHS*CHRTRH
Trigger: ATGCCGTGTGCGGTGACACAAGCTGTGGTGAGGGTA...CAGGCGGGCATCTGTTTCTGGTGGGTTGTCAGGCCTCTTACAGCAAGTACTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR-3UTR CAA 90 bp TCTCTCTTCCGTCGCCCGCGGGCCCTGCTTCCTCCTCCAGTGTCGTTTCTCATGTGGTTATGTAACTGTTaGCTACCTGGCTTCTCTAAC +
Preference number: 3 (lower is better)
Translates to: SLFRRPRALLPPPVSFLMWLCNC*LPGFSN
Trigger: GTTAGAGAAGCCAGGTAGCAAACAGTTACATAACCA...CATGAGAAACGACACTGGAGGAGGAAGCAGGGCCCGCGGGCGACGGAAGAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR TCA 72 bp ACAGCTTGTGTCACCGCACACGGCATTGGGAAGACATaGGCACAGCTGCTCCAGCACACAACAGTTTGCATG +
Preference number: 3 (lower is better)
Translates to: TACVTAHGIGKT*AQLLQHTTVCM
Trigger: CATGCAAACTGTTGTGTGCTGGAGCAGCTGTGCTCATGTCTTCCCAATGCCGTGTGCGGTGACACAAGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR TCA 72 bp TGGCTGCAGCTGCAGACAGCTATTTGGCAAATGCTATaGACTATCCCTGATCTGCCCAGGGGAGGCGTGTCT +
Preference number: 3 (lower is better)
Translates to: WLQLQTAIWQML*TIPDLPRGGVS
Trigger: AGACACGCCTCCCCTGGGCAGATCAGGGATAGTTCATAGCATTTGCCAAATAGCTGTCTGCAGCTGCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR TCA 72 bp CGGCTCTGTGCCCGACAAGATGGTAGCTGTGGAGACTaGTCTGAAAAAGCATCCTTCGTGACAGGTGGAAGT +
Preference number: 3 (lower is better)
Translates to: RLCARQDGSCGD*SEKASFVTGGS
Trigger: ACTTCCACCTGTCACGAAGGATGCTTTTTCAGATCAGTCTCCACAGCTACCATCTTGTCGGGCACAGAGCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
3UTR GCA 72 bp TGGGAACAACCCACCCAGCCAATTAGGTTCCTCAGTTaGATGACACCAAGGAGCTGCTGTCTGGGAAATGCA +
Preference number: 3 (lower is better)
Translates to: WEQPTQPIRFLS*MTPRSCCLGNA
Trigger: TGCATTTCCCAGACAGCAGCTCCTTGGTGTCATGCAACTGAGGAACCTAATTGGCTGGGTGGGTTGTTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
3UTR CCA 72 bp GGCTCCCTGCACCAGTGCCACGGCATCATCATACCGTaGTTATGTAACTGTTTGCTACCTGGCTTCTCTAAC +
Preference number: 3 (lower is better)
Translates to: GSLHQCHGIIIP*LCNCLLPGFSN
Trigger: GTTAGAGAAGCCAGGTAGCAAACAGTTACATAACCACGGTATGATGATGCCGTGGCACTGGTGCAGGGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR CCA 72 bp ACTTGTGTCCCGCCTCGCCGGGCAATGATGTATGTGTaGAGCGCAGTCATGTTCTTTGTTACGCAACACAGT +
Preference number: 3 (lower is better)
Translates to: TCVPPRRAMMYV*SAVMFFVTQHS
Trigger: ACTGTGTTGCGTAACAAAGAACATGACTGCGCTCCACACATACATCATTGCCCGGCGAGGCGGGACACAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR CCA 72 bp CAGAACAATGATCAAAGCAATGGTCACAATAGTGCCTaGGGTGGCTGTCATCTCTACGAGGCCTGGGTGCAC +
Preference number: 3 (lower is better)
Translates to: QNNDQSNGHNSA*GGCHLYEAWVH
Trigger: GTGCACCCAGGCCTCGTAGAGATGACAGCCACCCCAGGCACTATTGTGACCATTGCTTTGATCATTGTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR-3UTR CAA 90 bp AGACAGTTCCTCTTGACCTGGAATTGTCCAAGTCAGCACCACAGCTGGTTAAGGACTGCTCCCAGGAATTaGGAGTTGATACCTGGGGAC +
Preference number: 3 (lower is better)
Translates to: RQFLLTWNCPSQHHSWLRTAPRN*ELIPGD
Trigger: GTCCCCAGGTATCAACTCCAAATTCCTGGGAGCAGT...CCTTAACCAGCTGTGGTGCTGACTTGGACAATTCCAGGTCAAGAGGAACTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR TCA 72 bp GTAGCTGTGGAGACTGATCTGAAAAAGCATCCTTCGTaGCAGGTGGAAGTTGGATGGGAACAACCCACCCAG +
Preference number: 3 (lower is better)
Translates to: VAVETDLKKHPS*QVEVGWEQPTQ
Trigger: CTGGGTGGGTTGTTCCCATCCAACTTCCACCTGTCACGAAGGATGCTTTTTCAGATCAGTCTCCACAGCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
3UTR GCA 72 bp TTAATCTCGGAGGCTGTCCAGGGAGAGCTAAGGAAATaGTGGCGGTTGGAACCTGTTCATTCTTGCCTAGAG +
Preference number: 3 (lower is better)
Translates to: LISEAVQGELRK*WRLEPVHSCLE
Trigger: CTCTAGGCAAGAATGAACAGGTTCCAACCGCCAGCATTTCCTTAGCTCTCCCTGGACAGCCTCCGAGATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR GCA 72 bp CTGCAGCAAGTATGGCTTAAACCTGCTTCTGAACCGTaGACAGTTGTAGGCCTGTCTCAAGTGTTCCGTCGT +
Preference number: 3 (lower is better)
Translates to: LQQVWLKPASEP*TVVGLSQVFRR
Trigger: ACGACGGAACACTTGAGACAGGCCTACAACTGTGCACGGTTCAGAAGCAGGTTTAAGCCATACTTGCTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR-3UTR CAA 90 bp CTGAAGATCTCAGCTCTCGTCAGCCTTGCAAAGCTTGCTGCATCTGAGTCTTGGACTCAGAGCCAACTATaGAGGACCTGGGAACTTATG +
Preference number: 3 (lower is better)
Translates to: LKISALVSLAKLAASESWTQSQL*RTWELM
Trigger: CATAAGTTCCCAGGTCCTCAATAGTTGGCTCTGAGT...CCAAGACTCAGATGCAGCAAGCTTTGCAAGGCTGACGAGAGCTGAGATCTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR TCA 72 bp GTTTCTACGGACAGAAACCACTCCCGACACTTACTCTaGAACTCCCTCCACAAAATCTGCAGAGCCTCCTTC +
Preference number: 3 (lower is better)
Translates to: VSTDRNHSRHLL*NSLHKICRASF
Trigger: GAAGGAGGCTCTGCAGATTTTGTGGAGGGAGTTTCAGAGTAAGTGTCGGGAGTGGTTTCTGTCCGTAGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR TCA 72 bp GGAAATGCACTTATTAGGAGAGGGACAAACTGTGACTaGGCCACAGGCTCACCTCAGCCAGTCAAAAGGACT +
Preference number: 3 (lower is better)
Translates to: GNALIRRGTNCD*ATGSPQPVKRT
Trigger: AGTCCTTTTGACTGGCTGAGGTGAGCCTGTGGCTCAGTCACAGTTTGTCCCTCTCCTAATAAGTGCATTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
3UTR CCA 72 bp CTCGTCAGCCTTGCAAAGCTTGCTGCATCTGAGTCTTaGGCTCCCGGTCCACTGCTTAAAAAGTTACTATCA +
Preference number: 3 (lower is better)
Translates to: LVSLAKLAASES*APGPLLKKLLS
Trigger: TGATAGTAACTTTTTAAGCAGTGGACCGGGAGCCCAAGACTCAGATGCAGCAAGCTTTGCAAGGCTGACGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
3UTR TCA 72 bp CATGAGCACAGCTGCTCCAGCACACAACAGTTTGCATaGAAAGGATGCCCGGTGAAGGTGGCAGAAAATAAA +
Preference number: 3 (lower is better)
Translates to: HEHSCSSTQQFA*KGCPVKVAENK
Trigger: TTTATTTTCTGCCACCTTCACCGGGCATCCTTTTCATGCAAACTGTTGTGTGCTGGAGCAGCTGTGCTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR TCA 72 bp ATTTCTGATTTTCAGCATTTGCAGGTTTCTGTGGCCTaGATACCCTCACCACAGCTTGTGTCACCGCACACG +
Preference number: 3 (lower is better)
Translates to: ISDFQHLQVSVA*IPSPQLVSPHT
Trigger: CGTGTGCGGTGACACAAGCTGTGGTGAGGGTATTCAGGCCACAGAAACCTGCAAATGCTGAAAATCAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR TCA 72 bp ACTGTTTGCTACCTGGCTTCTCTAACATGCTGGTCTTaGCCCCTCAGCAATGTGGTTTCTACGGACAGAAAC +
Preference number: 3 (lower is better)
Translates to: TVCYLASLTCWS*PLSNVVSTDRN
Trigger: GTTTCTGTCCGTAGAAACCACATTGCTGAGGGGTCAAGACCAGCATGTTAGAGAAGCCAGGTAGCAAACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR GCA 72 bp CCAATTAGGTTCCTCAGTTGCATGACACCAAGGAGCTaGTGTCTGGGAAATGCACTTATTAGGAGAGGGACA +
Preference number: 3 (lower is better)
Translates to: PIRFLSCMTPRS*CLGNALIRRGT
Trigger: TGTCCCTCTCCTAATAAGTGCATTTCCCAGACAGCAGCTCCTTGGTGTCATGCAACTGAGGAACCTAATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
3UTR-3UTR CAA 90 bp GAGGGACAAACTGTGACTGAGCCACAGGCTCACCTCAGCCAGTCAAAAGGACTTTTAATACAATGTTTATaGATCCACAGATGTGTGCCG +
Preference number: 3 (lower is better)
Translates to: EGQTVTEPQAHLSQSKGLLIQCL*IHRCVP
Trigger: CGGCACACATCTGTGGATCAATAAACATTGTATTAA...AAGTCCTTTTGACTGGCTGAGGTGAGCCTGTGGCTCAGTCACAGTTTGTCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR TCA 72 bp GCACTCAGTGGTGTGCAGGTGAATGGCTCAACAGCCTaGATTTCTGATTTTCAGCATTTGCAGGTTTCTGTG +
Preference number: 3 (lower is better)
Translates to: ALSGVQVNGSTA*ISDFQHLQVSV
Trigger: CACAGAAACCTGCAAATGCTGAAAATCAGAAATTCAGGCTGTTGAGCCATTCACCTGCACACCACTGAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR GCA 72 bp AATGGCAGTGTTGATTACGGAGGTGATGGCTGCAGCTaGAGACAGCTATTTGGCAAATGCTATGAACTATCC +
Preference number: 3 (lower is better)
Translates to: NGSVDYGGDGCS*RQLFGKCYELS
Trigger: GGATAGTTCATAGCATTTGCCAAATAGCTGTCTGCAGCTGCAGCCATCACCTCCGTAATCAACACTGCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR GCA 72 bp TCAGACAATGGCAGTGTTGATTACGGAGGTGATGGCTaGAGCTGCAGACAGCTATTTGGCAAATGCTATGAA +
Preference number: 3 (lower is better)
Translates to: SDNGSVDYGGDG*SCRQLFGKCYE
Trigger: TTCATAGCATTTGCCAAATAGCTGTCTGCAGCTGCAGCCATCACCTCCGTAATCAACACTGCCATTGTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR-3UTR CAA 90 bp CTCCCGGTCCACTGCTTAAAAAGTTACTATCACACAAAGTCGAAAGTAGACAGTCAGACAATGGCAGTGTaGATTACGGAGGTGATGGCT +
Preference number: 3 (lower is better)
Translates to: LPVHCLKSYYHTKSKVDSQTMAV*ITEVMA
Trigger: AGCCATCACCTCCGTAATCAACACTGCCATTGTCTG...ACTGTCTACTTTCGACTTTGTGTGATAGTAACTTTTTAAGCAGTGGACCGGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR GCA 72 bp AGCTTGCTGCATCTGAGTCTTGGGCTCCCGGTCCACTaGTTAAAAAGTTACTATCACACAAAGTCGAAAGTA +
Preference number: 3 (lower is better)
Translates to: SLLHLSLGLPVH*LKSYYHTKSKV
Trigger: TACTTTCGACTTTGTGTGATAGTAACTTTTTAAGCAGTGGACCGGGAGCCCAAGACTCAGATGCAGCAAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
3UTR-3UTR CAA 90 bp TCATTCTTTATTCAACATACACTTGTTGATGCCCGGCTCTGTGCCCGACAAGATGGAACCTGTTCATTCTaGCCTAGAGTAAGGTACCTT +
Preference number: 3 (lower is better)
Translates to: SFFIQHTLVDARLCARQDGTCSF*PRVRYL
Trigger: AAGGTACCTTACTCTAGGCAAGAATGAACAGGTTCC...ATCTTGTCGGGCACAGAGCCGGGCATCAACAAGTGTATGTTGAATAAAGAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR-3UTR CAA 90 bp TTCTATCAGTGGCTTAACATAAATGTCTGTGTACACAAAACCTGTCTGATGATTAAAGCCAACAGCTCCTaGACGGATGAGGGCGTTCTG +
Preference number: 3 (lower is better)
Translates to: FYQWLNINVCVHKTCLMIKANSS*TDEGVL
Trigger: CAGAACGCCCTCATCCGTCAAGGAGCTGTTGGCTTT...AATCATCAGACAGGTTTTGTGTACACAGACATTTATGTTAAGCCACTGATAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR TCA 72 bp CAGCTTTCTTCTACACATATAAATCTTTTGAACATGTaGATCGTTTCCACACACCCTCCCTGGCCTTCTGTG +
Preference number: 3 (lower is better)
Translates to: QLSSTHINLLNM*IVSTHPPWPSV
Trigger: CACAGAAGGCCAGGGAGGGTGTGTGGAAACGATTCACATGTTCAAAAGATTTATATGTGTAGAAGAAAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR TCA 72 bp TTTGTTACGCAACACAGTTTTCACCTTGGGCTAAGATaGTGTGATTCTTCCAAGGTTTGTGGCAGAAATCCC +
Preference number: 3 (lower is better)
Translates to: FVTQHSFHLGLR*CDSSKVCGRNP
Trigger: GGGATTTCTGCCACAAACCTTGGAAGAATCACATCATCTTAGCCCAAGGTGAAAACTGTGTTGCGTAACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR CCA 72 bp GATGTAGATTGCCTTTTTCTTGAAAATGTAGACGTTTaGGAACTGTTGGAGACACACACACATTCTCAGCCC +
Preference number: 3 (lower is better)
Translates to: DVDCLFLENVDV*ELLETHTHSQP
Trigger: GGGCTGAGAATGTGTGTGTGTCTCCAACAGTTCCCAAACGTCTACATTTTCAAGAAAAAGGCAATCTACATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR CCA 72 bp CCCTTCACCATTGGAAATCAACTTAATGGACTGTCCTaGAAAGGTAGTCAGTCTAGTCTAAACAGGAAAGAC +
Preference number: 3 (lower is better)
Translates to: PFTIGNQLNGLS*KGSQSSLNRKD
Trigger: GTCTTTCCTGTTTAGACTAGACTGACTACCTTTCCAGGACAGTCCATTAAGTTGATTTCCAATGGTGAAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR TCA 72 bp TACGCAACACAGTTTTCACCTTGGGCTAAGATGATGTaGTTCTTCCAAGGTTTGTGGCAGAAATCCCATTTA +
Preference number: 3 (lower is better)
Translates to: YATQFSPWAKMM*FFQGLWQKSHL
Trigger: TAAATGGGATTTCTGCCACAAACCTTGGAAGAATCACATCATCTTAGCCCAAGGTGAAAACTGTGTTGCGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR-3UTR CAA 90 bp ACCATTGGAAATCAACTTAATGGACTGTCCTGGAAAGGTAGTCAGTCTAGTCTAATAGACAGCACAGAATaGTCTGTAGAGTCTGACATA +
Preference number: 3 (lower is better)
Translates to: TIGNQLNGLSWKGSQSSLIDSTE*SVESDI
Trigger: TATGTCAGACTCTACAGACAATTCTGTGCTGTCTAT...TAGACTAGACTGACTACCTTTCCAGGACAGTCCATTAAGTTGATTTCCAATGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR CCA 72 bp TTATATTTGCTGATTTATATCACATCATGGAGTTTTTaGTCTCTTAATCTCGGAGGCTGTCCAGGGAGAGCT +
Preference number: 3 (lower is better)
Translates to: LYLLIYITSWSF*SLNLGGCPGRA
Trigger: AGCTCTCCCTGGACAGCCTCCGAGATTAAGAGACCAAAAACTCCATGATGTGATATAAATCAGCAAATATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR GCA 72 bp AAATCTGATTATGGAAATCTAAGTTTGTTAAGTACTTaGTGTAAGAGGCCTGACAACCCACCAGAAACAGAT +
Preference number: 3 (lower is better)
Translates to: KSDYGNLSLLST*CKRPDNPPETD
Trigger: ATCTGTTTCTGGTGGGTTGTCAGGCCTCTTACAGCAAGTACTTAACAAACTTAGATTTCCATAATCAGATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CCA 90 bp CCCGCCTGGGGCCAACGCCGCCCTCTCCGCACACACAGGTGCCTTCTCAGGAGCCCTCCACTCCTCCTCTaGGACGCCAGCCCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: PAWGQRRPLRTHRCLLRSPPLLL*DASPGP
Trigger: TGGCCCAGGGCTGGCGTCCCAGAGGAGGAGTGGAGG...GCTCCTGAGAAGGCACCTGTGTGTGCGGAGAGGGCGGCGTTGGCCCCAGGCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR GCA 90 bp CCCGCCTGGGGCCAACGCCGCCCTCTCCGCACACACAGGTGCCTTCTCAGGAGCACCTGGTCCTCCCAGTaGCTCACCGGCCACTCGGCA +
Preference number: 4 (lower is better)
Translates to: PAWGQRRPLRTHRCLLRSTWSSQ*LTGHSA
Trigger: TGCCGAGTGGCCGGTGAGGCACTGGGAGGACCAGGT...GCTCCTGAGAAGGCACCTGTGTGTGCGGAGAGGGCGGCGTTGGCCCCAGGCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CCA 90 bp CTCCAGCACCCATATGCTCTGCACGCTGTGACTCCAGCCTTGTGGTCCCTGCAGCTGGGACGCCAGCCCTaGGCCAGGTGGGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: LQHPYALHAVTPALWSLQLGRQP*ARWAAL
Trigger: CAGAGCAGCCCACCTGGCCCAGGGCTGGCGTCCCAG...CTGCAGGGACCACAAGGCTGGAGTCACAGCGTGCAGAGCATATGGGTGCTGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR TCA 90 bp GTCCACCTGGACGTTGGCTACAGCTGCCTAACCTGTGGCTGCACCTTGGTCCACTCCTCCTCCTCGCGGTaGCCTGGTCCTCCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: VHLDVGYSCLTCGCTLVHSSSSR*PGPPSA
Trigger: GGCACTGGGAGGACCAGGTCACCGCGAGGAGGAGGA...GTGGACCAAGGTGCAGCCACAGGTTAGGCAGCTGTAGCCAACGTCCAGGTGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR GCA 90 bp GTCCACCTGGACGTTGGCTACAGCTGCCTAACCTGTGGCTGCACCTTGGTCCACGTCGCCCGCGGGCCCTaGTTCCTCCTCCAGTGTCGT +
Preference number: 4 (lower is better)
Translates to: VHLDVGYSCLTCGCTLVHVARGP*FLLQCR
Trigger: ACGACACTGGAGGAGGAAGCAGGGCCCGCGGGCGAC...GTGGACCAAGGTGCAGCCACAGGTTAGGCAGCTGTAGCCAACGTCCAGGTGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR GCA 90 bp TCTCTCTTCCGTCGCCCGCGGGCCCTGCTTCCTCCTCCAGTGTCGTTTCTCATGCCCACCAGAAACAGATaGCCGCCTGGGGCCAACGCC +
Preference number: 4 (lower is better)
Translates to: SLFRRPRALLPPPVSFLMPTRNR*PPGANA
Trigger: GGCGTTGGCCCCAGGCGGGCATCTGTTTCTGGTGGG...CATGAGAAACGACACTGGAGGAGGAAGCAGGGCCCGCGGGCGACGGAAGAGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CCA 90 bp CTCTCCTCCCTGCACTCCGGGCCTTATGGCCCTCTTGAGCCTCAGCTGGAACCTCTCCTCGCGGTGACCTaGTCCTCCCAGTGCCTCACC +
Preference number: 4 (lower is better)
Translates to: LSSLHSGPYGPLEPQLEPLLAVT*SSQCLT
Trigger: GGTGAGGCACTGGGAGGACCAGGTCACCGCGAGGAG...AGGTTCCAGCTGAGGCTCAAGAGGGCCATAAGGCCCGGAGTGCAGGGAGGAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR TCA 90 bp CTCCAGCACCCATATGCTCTGCACGCTGTGACTCCAGCCTTGTGGTCCCTGCAGGGGCAGCATGCTGTGTaGCGCAAGGCGGTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: LQHPYALHAVTPALWSLQGQHAV*RKAVQQ
Trigger: CTGCTGGACCGCCTTGCGTCACACAGCATGCTGCCC...CTGCAGGGACCACAAGGCTGGAGTCACAGCGTGCAGAGCATATGGGTGCTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR GCA 90 bp TCTCTCTTCCGTCGCCCGCGGGCCCTGCTTCCTCCTCCAGTGTCGTTTCTCATGTCTCGCCCTGTCACGTaGATCCCCTGGTCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: SLFRRPRALLPPPVSFLMSRPVT*IPWSSH
Trigger: GTGGCTGGACCAGGGGATGCACGTGACAGGGCGAGA...CATGAGAAACGACACTGGAGGAGGAAGCAGGGCCCGCGGGCGACGGAAGAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CCA 90 bp TCTCTCTTCCGTCGCCCGCGGGCCCTGCTTCCTCCTCCAGTGTCGTTTCTCATGCTCACATCCATCCCCTaGTCCAGCCACCGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: SLFRRPRALLPPPVSFLMLTSIP*SSHRAP
Trigger: AGGAGCCCGGTGGCTGGACCAGGGGATGGATGTGAG...CATGAGAAACGACACTGGAGGAGGAAGCAGGGCCCGCGGGCGACGGAAGAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CCA 90 bp AAGCCCACAAGGCTCACATGCCCGGGGTCCCATGTGCCTGGTCCTGTCACCTTTCCCAGCACTGCGCTCTaGGCAGGGCCTCTCACCTCA +
Preference number: 4 (lower is better)
Translates to: KPTRLTCPGSHVPGPVTFPSTAL*AGPLTS
Trigger: TGAGGTGAGAGGCCCTGCCCAGAGCGCAGTGCTGGG...AAAGGTGACAGGACCAGGCACATGGGACCCCGGGCATGTGAGCCTTGTGGGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR TCA 90 bp TGGGCACTGCCTCATTCAAGCCACCTTGGAGCAGACGTGGCTACGCTCCCAGCACGCCTCGCCGGGCAATaGTGTATGTGTGGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: WALPHSSHLGADVATLPARLAGQ*CMCGAQ
Trigger: CTGCGCTCCACACATACATCATTGCCCGGCGAGGCG...TGCTGGGAGCGTAGCCACGTCTGCTCCAAGGTGGCTTGAATGAGGCAGTGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR GCA 90 bp TGCTGCAAGTACCTCTTGGCAAATCCTCAGCCACCCCCACCTGGTCCACGCTGCCTGGGCCAGGTGGGCTaGTCTGCACTCAGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: CCKYLLANPQPPPPGPRCLGQVG*SALSGV
Trigger: CACACCACTGAGTGCAGAGCAGCCCACCTGGCCCAG...GCAGCGTGGACCAGGTGGGGGTGGCTGAGGATTTGCCAAGAGGTACTTGCAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR GCA 90 bp AAGCCCACAAGGCTCACATGCCCGGGGTCCCATGTGCCTGGTCCTGTCACCTTTCCTTCTCAGGAGCACTaGCACCTTCCTGCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: KPTRLTCPGSHVPGPVTFPSQEH*HLPAGA
Trigger: GGCCCCAGCAGGAAGGTGGCAGTGCTCCTGAGAAGG...AAAGGTGACAGGACCAGGCACATGGGACCCCGGGCATGTGAGCCTTGTGGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CCA 90 bp CCCACAAGGCTCACATGCCCGGGGTCCCATGTGCCTGGTCCTGTCACCTTTCCCCAGCGCATGCGCACTTaGCTGCAACAACACCCTCCT +
Preference number: 4 (lower is better)
Translates to: PTRLTCPGSHVPGPVTFPQRMRT*LQQHPP
Trigger: AGGAGGGTGTTGTTGCAGCCAAGTGCGCATGCGCTG...GGGAAAGGTGACAGGACCAGGCACATGGGACCCCGGGCATGTGAGCCTTGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CCA 90 bp TCCATGGTCCACCTGGACGTTGGCTACAGCTGCCTAACCTGTGGCTGCACCTTGCCTGTGGCTGCACCTTaGTCCACGCTGCAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: SMVHLDVGYSCLTCGCTLPVAAP*STLQAP
Trigger: AGGGGCCTGCAGCGTGGACCAAGGTGCAGCCACAGG...CAAGGTGCAGCCACAGGTTAGGCAGCTGTAGCCAACGTCCAGGTGGACCATGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CCA 90 bp TGGGCACTGCCTCATTCAAGCCACCTTGGAGCAGACGTGGCTACGCTCCCAGCAACCTTGGAGCAGACGTaGCTACGCTCCCAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: WALPHSSHLGADVATLPATLEQT*LRSQQP
Trigger: GGGCTGCTGGGAGCGTAGCCACGTCTGCTCCAAGGT...TGCTGGGAGCGTAGCCACGTCTGCTCCAAGGTGGCTTGAATGAGGCAGTGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR CCA 90 bp GCGTCTGTCTCTCATCGCGATGCCATCCTCATCCTGAGCCCCTGGACTCCTGTCACCTTGGAGCAGACGTaGCTACGCTCCCAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: ASVSHRDAILILSPWTPVTLEQT*LRSQQP
Trigger: GGGCTGCTGGGAGCGTAGCCACGTCTGCTCCAAGGT...GACAGGAGTCCAGGGGCTCAGGATGAGGATGGCATCGCGATGAGAGACAGACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR CAA 72 bp CTCTCTCCTCCCTGCACTCCGGGCCTTATGGCCCTCTaGAGCCTCAGCTGGAACCTGAGGTCTGACTGGCAC +
Preference number: 4 (lower is better)
Translates to: LSPPCTPGLMAL*SLSWNLRSDWH
Trigger: GTGCCAGTCAGACCTCAGGTTCCAGCTGAGGCTCAAGAGGGCCATAAGGCCCGGAGTGCAGGGAGGAGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR TCA 90 bp CCCAGACAGGTACGGCCAGAGCACTGCTCCCAGGAATTTGGAGTTGATACCTGGGGGCAGCATGCTGTGTaGCGCAAGGCGGTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: PRQVRPEHCSQEFGVDTWGQHAV*RKAVQQ
Trigger: CTGCTGGACCGCCTTGCGTCACACAGCATGCTGCCC...CCAGGTATCAACTCCAAATTCCTGGGAGCAGTGCTCTGGCCGTACCTGTCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR TCA 90 bp CCAGCAGCCCTGTACCCATCGGCCACTGAAGATCTCAGCTCTCGTCAGCCTTGCCAAGTGTTCCGTCGTTaGCTTGTGTCCCGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: PAALYPSATEDLSSRQPCQVFRR*LVSRLA
Trigger: GGCGAGGCGGGACACAAGTCAACGACGGAACACTTG...GCAAGGCTGACGAGAGCTGAGATCTTCAGTGGCCGATGGGTACAGGGCTGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR TCA 90 bp GTCCACCTGGACGTTGGCTACAGCTGCCTAACCTGTGGCTGCACCTTGGTCCACATGCTCTGCACGCTGTaGCTCCAGCCTTGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: VHLDVGYSCLTCGCTLVHMLCTL*LQPCGP
Trigger: GGGACCACAAGGCTGGAGTCACAGCGTGCAGAGCAT...GTGGACCAAGGTGCAGCCACAGGTTAGGCAGCTGTAGCCAACGTCCAGGTGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR GCA 90 bp GCCGCCGTCCAGAGAGAAACTCCTGCCACGTGTGTGAGGCTGACCGAACCCCGCCCTGCTTCTGAACCGTaGACAGTTGTAGGCCTGTCT +
Preference number: 4 (lower is better)
Translates to: AAVQRETPATCVRLTEPRPASEP*TVVGLS
Trigger: AGACAGGCCTACAACTGTGCACGGTTCAGAAGCAGG...GCGGGGTTCGGTCAGCCTCACACACGTGGCAGGAGTTTCTCTCTGGACGGCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR GCA 90 bp TCCATGGTCCACCTGGACGTTGGCTACAGCTGCCTAACCTGTGGCTGCACCTTGCCCACAAGGCTCACATaGCCGGGGTCCCATGTGCCT +
Preference number: 4 (lower is better)
Translates to: SMVHLDVGYSCLTCGCTLPTRLT*PGSHVP
Trigger: AGGCACATGGGACCCCGGGCATGTGAGCCTTGTGGG...CAAGGTGCAGCCACAGGTTAGGCAGCTGTAGCCAACGTCCAGGTGGACCATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR GCA 90 bp TCCATGGTCCACCTGGACGTTGGCTACAGCTGCCTAACCTGTGGCTGCACCTTGTGGCACCTGCATAGCTaGCCAGCACTGCGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: SMVHLDVGYSCLTCGCTLWHLHS*PALRSG
Trigger: CCCAGAGCGCAGTGCTGGGCAGCTATGCAGGTGCCA...CAAGGTGCAGCCACAGGTTAGGCAGCTGTAGCCAACGTCCAGGTGGACCATGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR GCA 90 bp CTCCAGCACCCATATGCTCTGCACGCTGTGACTCCAGCCTTGTGGTCCCTGCAGGATCTCTCTCCTCCCTaGACTCCGGGCCTTATGGCC +
Preference number: 4 (lower is better)
Translates to: LQHPYALHAVTPALWSLQDLSPP*TPGLMA
Trigger: GGCCATAAGGCCCGGAGTGCAGGGAGGAGAGAGATC...CTGCAGGGACCACAAGGCTGGAGTCACAGCGTGCAGAGCATATGGGTGCTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR GCA 90 bp GTCCACCTGGACGTTGGCTACAGCTGCCTAACCTGTGGCTGCACCTTGGTCCACCTCCGCACACACAGGTaGCTTCTCAGGAGCACTGCC +
Preference number: 4 (lower is better)
Translates to: VHLDVGYSCLTCGCTLVHLRTHR*LLRSTA
Trigger: GGCAGTGCTCCTGAGAAGGCACCTGTGTGTGCGGAG...GTGGACCAAGGTGCAGCCACAGGTTAGGCAGCTGTAGCCAACGTCCAGGTGGAC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR GCA 90 bp GACTTGTGTCCCGCCTCGCCGGGCAATGATGTATGTGTGGAGCGCAGTCATGTTCCACGTCCTAGCCTCTaGCGGGTCTGCAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: DLCPASPGNDVCVERSHVPRPSL*RVCRSW
Trigger: CCAGCTCCTGCAGACCCGGCAGAGGCTAGGACGTGG...AACATGACTGCGCTCCACACATACATCATTGCCCGGCGAGGCGGGACACAAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CCA 90 bp TGCTGCAAGTACCTCTTGGCAAATCCTCAGCCACCCCCACCTGGTCCACGCTGCCCTCCATGGTCCACCTaGACGTTGGCTACAGCTGCC +
Preference number: 4 (lower is better)
Translates to: CCKYLLANPQPPPPGPRCPPWST*TLATAA
Trigger: GGCAGCTGTAGCCAACGTCCAGGTGGACCATGGAGG...GCAGCGTGGACCAGGTGGGGGTGGCTGAGGATTTGCCAAGAGGTACTTGCAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CCA 90 bp CCCACAAGGCTCACATGCCCGGGGTCCCATGTGCCTGGTCCTGTCACCTTTCCCCTCTTGAGCCTCAGCTaGAACCTGAGGTCTGACTGG +
Preference number: 4 (lower is better)
Translates to: PTRLTCPGSHVPGPVTFPLLSLS*NLRSDW
Trigger: CCAGTCAGACCTCAGGTTCCAGCTGAGGCTCAAGAG...GGGAAAGGTGACAGGACCAGGCACATGGGACCCCGGGCATGTGAGCCTTGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CCA 90 bp AGACGTTTGGGAACTGTTGGAGACACACACACATTCTCAGCCCATCACTCCGCCCCTGTCGGCCAGGTGTaGGCGGCCGCCGTCCAGAGA +
Preference number: 4 (lower is better)
Translates to: RRLGTVGDTHTFSAHHSAPVGQV*AAAVQR
Trigger: TCTCTGGACGGCGGCCGCCCACACCTGGCCGACAGG...GGCGGAGTGATGGGCTGAGAATGTGTGTGTGTCTCCAACAGTTCCCAAACGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR TCA 90 bp TGCTGCAAGTACCTCTTGGCAAATCCTCAGCCACCCCCACCTGGTCCACGCTGCGGCATTGGGAAGACATaGGCACAGCTGCTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: CCKYLLANPQPPPPGPRCGIGKT*AQLLQH
Trigger: GTGCTGGAGCAGCTGTGCTCATGTCTTCCCAATGCC...GCAGCGTGGACCAGGTGGGGGTGGCTGAGGATTTGCCAAGAGGTACTTGCAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR TCA 90 bp CGCACACCCCATGCTCTCCTGGCTAAGCGGATTCAGCGCTGGCCAACAAACCCAAAAGCTTGCTGCATCTaGGTCTTGGGCTCCCGGTCC +
Preference number: 4 (lower is better)
Translates to: RTPHALLAKRIQRWPTNPKACCI*VLGSRS
Trigger: GGACCGGGAGCCCAAGACTCAGATGCAGCAAGCTTT...TGGGTTTGTTGGCCAGCGCTGAATCCGCTTAGCCAGGAGAGCATGGGGTGTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR TCA 90 bp CGCACACCCCATGCTCTCCTGGCTAAGCGGATTCAGCGCTGGCCAACAAACCCAGCTATGAACTATCCCTaGTCTGCCCAGGGGAGGCGT +
Preference number: 4 (lower is better)
Translates to: RTPHALLAKRIQRWPTNPAMNYP*SAQGRR
Trigger: ACGCCTCCCCTGGGCAGATCAGGGATAGTTCATAGC...TGGGTTTGTTGGCCAGCGCTGAATCCGCTTAGCCAGGAGAGCATGGGGTGTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR GCA 90 bp GGCTCCTCGCAGTTCCCAAACACATGGGTTCACCCATCTCAGCGCATGCGCACTCGTCTGAGGGCAGCATaGTGTGTGACGCAAGGCGGT +
Preference number: 4 (lower is better)
Translates to: GSSQFPNTWVHPSQRMRTRLRAA*CVTQGG
Trigger: ACCGCCTTGCGTCACACAGCATGCTGCCCTCAGACG...AGTGCGCATGCGCTGAGATGGGTGAACCCATGTGTTTGGGAACTGCGAGGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR GCA 90 bp TCGTCAGCCTTGCAAAGCTTGCTGCATCTGAGTCTTGGGCTCCCGGTCCACTGCCGTCTGAGGGCAGCATaGTGTGTGACGCAAGGCGGT +
Preference number: 4 (lower is better)
Translates to: SSALQSLLHLSLGLPVHCRLRAA*CVTQGG
Trigger: ACCGCCTTGCGTCACACAGCATGCTGCCCTCAGACG...GCAGTGGACCGGGAGCCCAAGACTCAGATGCAGCAAGCTTTGCAAGGCTGACGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR GCA 90 bp TCCATGCTGCAAGTACCTCTTGGCAAATCCTCAGCCACCCCCACCTGGTCCACGCCAGGTGGGCTGCTCTaGACTCAGTGGTGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: SMLQVPLGKSSATPTWSTPGGLL*TQWCAG
Trigger: ACCTGCACACCACTGAGTGCAGAGCAGCCCACCTGG...CGTGGACCAGGTGGGGGTGGCTGAGGATTTGCCAAGAGGTACTTGCAGCATGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR GCA 90 bp TCCATGGTCCACCTGGACGTTGGCTACAGCTGCCTAACCTGTGGCTGCACCTTGGGTCTGACTGGCACCTaGATAGCTGCCCAGCACTGC +
Preference number: 4 (lower is better)
Translates to: SMVHLDVGYSCLTCGCTLGLTGT*IAAQHC
Trigger: GCAGTGCTGGGCAGCTATGCAGGTGCCAGTCAGACC...CAAGGTGCAGCCACAGGTTAGGCAGCTGTAGCCAACGTCCAGGTGGACCATGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CCA 90 bp TCCATGGTCCACCTGGACGTTGGCTACAGCTGCCTAACCTGTGGCTGCACCTTGCTCCTCCCATGTGCCTaGCCCTGTCACCTCTTCACC +
Preference number: 4 (lower is better)
Translates to: SMVHLDVGYSCLTCGCTLLLPCA*PCHLFT
Trigger: GGTGAAGAGGTGACAGGGCCAGGCACATGGGAGGAG...CAAGGTGCAGCCACAGGTTAGGCAGCTGTAGCCAACGTCCAGGTGGACCATGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CCA 90 bp GGCTCCTCGCAGTTCCCAAACACATGGGTTCACCCATCTCAGCGCATGCGCACTCAGCTGCCTAACCTGTaGCTGCACCTTGGTCCACGC +
Preference number: 4 (lower is better)
Translates to: GSSQFPNTWVHPSQRMRTQLPNL*LHLGPR
Trigger: GCGTGGACCAAGGTGCAGCCACAGGTTAGGCAGCTG...AGTGCGCATGCGCTGAGATGGGTGAACCCATGTGTTTGGGAACTGCGAGGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR CAA 72 bp CAACCCGAGCTGTGCCGTGGAGGAGGAAAGCACAGCTaGGCCTGGTACTCACCAAGCTCTCGTCATGGTGTC +
Preference number: 4 (lower is better)
Translates to: QPELCRGGGKHS*AWYSPSSRHGV
Trigger: GACACCATGACGAGAGCTTGGTGAGTACCAGGCCAAGCTGTGCTTTCCTCCTCCACGGCACAGCTCGGGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR TCA 90 bp GCCGCCGTCCAGAGAGAAACTCCTGCCACGTGTGTGAGGCTGACCGAACCCCGCCTGTGGAGACTGATCTaGAAAAGCATCCTTCGTGAC +
Preference number: 4 (lower is better)
Translates to: AAVQRETPATCVRLTEPRLWRLI*KSILRD
Trigger: GTCACGAAGGATGCTTTTTCAGATCAGTCTCCACAG...GCGGGGTTCGGTCAGCCTCACACACGTGGCAGGAGTTTCTCTCTGGACGGCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR TCA 90 bp CCAGCAGCCCTGTACCCATCGGCCACTGAAGATCTCAGCTCTCGTCAGCCTTGCTCAACATACACTTGTTaGTGCCCGGCTCTGTGCCCG +
Preference number: 4 (lower is better)
Translates to: PAALYPSATEDLSSRQPCSTYTC*CPALCP
Trigger: CGGGCACAGAGCCGGGCATCAACAAGTGTATGTTGA...GCAAGGCTGACGAGAGCTGAGATCTTCAGTGGCCGATGGGTACAGGGCTGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR TCA 90 bp CGCACACCCCATGCTCTCCTGGCTAAGCGGATTCAGCGCTGGCCAACAAACCCATCAACATACACTTGTTaGTGCCCGGCTCTGTGCCCG +
Preference number: 4 (lower is better)
Translates to: RTPHALLAKRIQRWPTNPSTYTC*CPALCP
Trigger: CGGGCACAGAGCCGGGCATCAACAAGTGTATGTTGA...TGGGTTTGTTGGCCAGCGCTGAATCCGCTTAGCCAGGAGAGCATGGGGTGTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR TCA 90 bp TTGTTGATGCCCGGCTCTGTGCCCGACAAGATGGTAGCTGTGGAGACTGATCTGACATGGAACTGTGGCTaGCGGCCTGCCCAGAGGGTG +
Preference number: 4 (lower is better)
Translates to: LLMPGSVPDKMVAVETDLTWNCG*RPAQRV
Trigger: CACCCTCTGGGCAGGCCGTCAGCCACAGTTCCATGT...CAGATCAGTCTCCACAGCTACCATCTTGTCGGGCACAGAGCCGGGCATCAACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR GCA 90 bp CTGAGTCTTGGGCTCCCGGTCCACTGCTTAAAAAGTTACTATCACACAAAGTCGTCCTGTGCGCCGCCATaGGGGACCCTGCCGCGGACC +
Preference number: 4 (lower is better)
Translates to: LSLGLPVHCLKSYYHTKSSCAPP*GTLPRT
Trigger: GGTCCGCGGCAGGGTCCCGCATGGCGGCGCACAGGA...CGACTTTGTGTGATAGTAACTTTTTAAGCAGTGGACCGGGAGCCCAAGACTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522706.5
CDS-3UTR GCA 90 bp CCCACAAGGCTCACATGCCCGGGGTCCCATGTGCCTGGTCCTGTCACCTTTCCCTCCCTCCACAAAATCTaGAGAGCCTCCTTCACTCCT +
Preference number: 4 (lower is better)
Translates to: PTRLTCPGSHVPGPVTFPSLHKI*RASFTP
Trigger: AGGAGTGAAGGAGGCTCTGCAGATTTTGTGGAGGGA...GGGAAAGGTGACAGGACCAGGCACATGGGACCCCGGGCATGTGAGCCTTGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR GCA 90 bp AACCCCAACCTGGTCCATGCTGCAAGTACCTCTTGGCAAATCCTCAGCCACCCCTCCCCAGTGGTAGGCTaGACAGCCCACAGCACCATG +
Preference number: 4 (lower is better)
Translates to: NPNLVHAASTSWQILSHPSPVVG*TAHSTM
Trigger: CATGGTGCTGTGGGCTGTGCAGCCTACCACTGGGGA...GGGGTGGCTGAGGATTTGCCAAGAGGTACTTGCAGCATGGACCAGGTTGGGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR GCA 90 bp TGCTGCAAGTACCTCTTGGCAAATCCTCAGCCACCCCCACCTGGTCCACGCTGCGCATGCGCACTTGGCTaGAACAACACCCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: CCKYLLANPQPPPPGPRCACALG*NNTLLF
Trigger: GAAGAGGAGGGTGTTGTTGCAGCCAAGTGCGCATGC...GCAGCGTGGACCAGGTGGGGGTGGCTGAGGATTTGCCAAGAGGTACTTGCAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR GCA 90 bp TCCCAAACACATGGGTTCACCCATCTCAGCGCATGCGCACTTGGCTGCAACAACCGGGCTCCTCCCATGTaGCTGGCCCTGTCACCTCTT +
Preference number: 4 (lower is better)
Translates to: SQTHGFTHLSACALGCNNRAPPM*LALSPL
Trigger: AAGAGGTGACAGGGCCAGGCACATGGGAGGAGCCCG...GTTGTTGCAGCCAAGTGCGCATGCGCTGAGATGGGTGAACCCATGTGTTTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR GCA 90 bp AAGCCCACAAGGCTCACATGCCCGGGGTCCCATGTGCCTGGTCCTGTCACCTTTCTGAGACTCACTCAATaGCTCTCGCCCTGTCACGTG +
Preference number: 4 (lower is better)
Translates to: KPTRLTCPGSHVPGPVTFLRLTQ*LSPCHV
Trigger: CACGTGACAGGGCGAGAGGCATTGAGTGAGTCTCAG...AAAGGTGACAGGACCAGGCACATGGGACCCCGGGCATGTGAGCCTTGTGGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR GCA 90 bp TCCATGGTCCACCTGGACGTTGGCTACAGCTGCCTAACCTGTGGCTGCACCTTGTGCCTAACCTGTGGCTaGACCTTGGTCCACGCTGCA +
Preference number: 4 (lower is better)
Translates to: SMVHLDVGYSCLTCGCTLCLTCG*TLVHAA
Trigger: TGCAGCGTGGACCAAGGTGCAGCCACAGGTTAGGCA...CAAGGTGCAGCCACAGGTTAGGCAGCTGTAGCCAACGTCCAGGTGGACCATGGA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CCA 90 bp CAGGTGGAAGTTGGATGGGAACAACCCACCCAGCCAATTAGGTTCCTCAGTTGCCAGGCTTCCGTGCTCTaGGCTCCAGCAGGACGGGGA +
Preference number: 4 (lower is better)
Translates to: QVEVGWEQPTQPIRFLSCQASVL*APAGRG
Trigger: TCCCCGTCCTGCTGGAGCCCAGAGCACGGAAGCCTG...GCAACTGAGGAACCTAATTGGCTGGGTGGGTTGTTCCCATCCAACTTCCACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CCA 90 bp CCCACAAGGCTCACATGCCCGGGGTCCCATGTGCCTGGTCCTGTCACCTTTCCCGACCCCTCAGCAATGTaGTTTCTACGGACAGAAACC +
Preference number: 4 (lower is better)
Translates to: PTRLTCPGSHVPGPVTFPDPSAM*FLRTET
Trigger: GGTTTCTGTCCGTAGAAACCACATTGCTGAGGGGTC...GGGAAAGGTGACAGGACCAGGCACATGGGACCCCGGGCATGTGAGCCTTGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CCA 90 bp CCCTCAGCAATGTGGTTTCTACGGACAGAAACCACTCCCGACACTTACTCTGAAGCAAGCGCCCCAGGGTaGGGTCCCCACCAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: PSAMWFLRTETTPDTYSEASAPG*GPHQPS
Trigger: GGAAGGCTGGTGGGGACCCCACCCTGGGGCGCTTGC...TTCAGAGTAAGTGTCGGGAGTGGTTTCTGTCCGTAGAAACCACATTGCTGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CCA 90 bp AAGCCCACAAGGCTCACATGCCCGGGGTCCCATGTGCCTGGTCCTGTCACCTTTGCTGCAAGTACCTCTTaGCAAATCCTCAGCCACCCC +
Preference number: 4 (lower is better)
Translates to: KPTRLTCPGSHVPGPVTFAASTS*QILSHP
Trigger: GGGGTGGCTGAGGATTTGCCAAGAGGTACTTGCAGC...AAAGGTGACAGGACCAGGCACATGGGACCCCGGGCATGTGAGCCTTGTGGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CCA 90 bp TCCATGCTGCAAGTACCTCTTGGCAAATCCTCAGCCACCCCCACCTGGTCCACGCTCGGCAGCTCCCACTaGTTCTACCTCCATGGTCCA +
Preference number: 4 (lower is better)
Translates to: SMLQVPLGKSSATPTWSTLGSSH*FYLHGP
Trigger: TGGACCATGGAGGTAGAACCAGTGGGAGCTGCCGAG...CGTGGACCAGGTGGGGGTGGCTGAGGATTTGCCAAGAGGTACTTGCAGCATGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CCA 90 bp TGCTGCAAGTACCTCTTGGCAAATCCTCAGCCACCCCCACCTGGTCCACGCTGCTGGTCACGCTCCTGGTaGGCATCTGTACTCACTGTC +
Preference number: 4 (lower is better)
Translates to: CCKYLLANPQPPPPGPRCWSRSW*ASVLTV
Trigger: GACAGTGAGTACAGATGCCCACCAGGAGCGTGACCA...GCAGCGTGGACCAGGTGGGGGTGGCTGAGGATTTGCCAAGAGGTACTTGCAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CCA 90 bp GGCTCCTCGCAGTTCCCAAACACATGGGTTCACCCATCTCAGCGCATGCGCACTCCCTGGTCACGCTCCTaGTGGGCATCTGTACTCACT +
Preference number: 4 (lower is better)
Translates to: GSSQFPNTWVHPSQRMRTPWSRS*WASVLT
Trigger: AGTGAGTACAGATGCCCACCAGGAGCGTGACCAGGG...AGTGCGCATGCGCTGAGATGGGTGAACCCATGTGTTTGGGAACTGCGAGGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CCA 90 bp GTCCACCTGGACGTTGGCTACAGCTGCCTAACCTGTGGCTGCACCTTGGTCCACCAGTGTCGTTTCTCATaGTCCCTGGTCACGCTCCTG +
Preference number: 4 (lower is better)
Translates to: VHLDVGYSCLTCGCTLVHQCRFS*SLVTLL
Trigger: CAGGAGCGTGACCAGGGACCATGAGAAACGACACTG...GTGGACCAAGGTGCAGCCACAGGTTAGGCAGCTGTAGCCAACGTCCAGGTGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR TCA 90 bp TGGGCGGCCGCCGTCCAGAGAGAAACTCCTGCCACGTGTGTGAGGCTGACCGAAGTAGACAGTTCCTCTTaGCCTGGAATTGTCCAAGTC +
Preference number: 4 (lower is better)
Translates to: WAAAVQRETPATCVRLTEVDSSS*PGIVQV
Trigger: GACTTGGACAATTCCAGGTCAAGAGGAACTGTCTAC...TTCGGTCAGCCTCACACACGTGGCAGGAGTTTCTCTCTGGACGGCGGCCGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR TCA 90 bp GACTTGTGTCCCGCCTCGCCGGGCAATGATGTATGTGTGGAGCGCAGTCATGTTCTGCAGGTACAAAGGTaGGCACCAGACAGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: DLCPASPGNDVCVERSHVLQVQR*APDRAP
Trigger: GGGAGCTCTGTCTGGTGCTCACCTTTGTACCTGCAG...AACATGACTGCGCTCCACACATACATCATTGCCCGGCGAGGCGGGACACAAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR GCA 90 bp TCAGCAACCCCAACCTGGTCCATGCTGCAAGTACCTCTTGGCAAATCCTCAGCCGGCTCCCTGCACCAGTaGCACGGCATCATCATACCG +
Preference number: 4 (lower is better)
Translates to: SATPTWSMLQVPLGKSSAGSLHQ*HGIIIP
Trigger: CGGTATGATGATGCCGTGGCACTGGTGCAGGGAGCC...GGCTGAGGATTTGCCAAGAGGTACTTGCAGCATGGACCAGGTTGGGGTTGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR GCA 90 bp CCCTCAGCAATGTGGTTTCTACGGACAGAAACCACTCCCGACACTTACTCTGAACAGCCTTGTGGTCCCTaGAGCCCCCGGCTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: PSAMWFLRTETTPDTYSEQPCGP*SPRLPA
Trigger: TGCAGGGAGCCGGGGGCTGCAGGGACCACAAGGCTG...TTCAGAGTAAGTGTCGGGAGTGGTTTCTGTCCGTAGAAACCACATTGCTGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR GCA 90 bp AACCCCAACCTGGTCCATGCTGCAAGTACCTCTTGGCAAATCCTCAGCCACCCCGACGTTGGCTACAGCTaGCTAACCTGTGGCTGCACC +
Preference number: 4 (lower is better)
Translates to: NPNLVHAASTSWQILSHPDVGYS*LTCGCT
Trigger: GGTGCAGCCACAGGTTAGGCAGCTGTAGCCAACGTC...GGGGTGGCTGAGGATTTGCCAAGAGGTACTTGCAGCATGGACCAGGTTGGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR GCA 90 bp GAAGGCTCAGACAATGGCAGTGTTGATTACGGAGGTGATGGCTGCAGCTGCAGACCCCAACCCGAGCTGTaGCGTGGAGGAGGAAAGCAC +
Preference number: 4 (lower is better)
Translates to: EGSDNGSVDYGGDGCSCRPQPEL*RGGGKH
Trigger: GTGCTTTCCTCCTCCACGGCACAGCTCGGGTTGGGG...TCTGCAGCTGCAGCCATCACCTCCGTAATCAACACTGCCATTGTCTGAGCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CCA 90 bp CCAGCAGCCCTGTACCCATCGGCCACTGAAGATCTCAGCTCTCGTCAGCCTTGCTCATGTGGTACAGGATaGACACGTCTGAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: PAALYPSATEDLSSRQPCSCGTG*TRLRAA
Trigger: TGCTGCCCTCAGACGTGTCCATCCTGTACCACATGA...GCAAGGCTGACGAGAGCTGAGATCTTCAGTGGCCGATGGGTACAGGGCTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR CCA 90 bp TGCTGCAAGTACCTCTTGGCAAATCCTCAGCCACCCCCACCTGGTCCACGCTGCCAGTTCCCAAACACATaGGTTCACCCATCTCAGCGC +
Preference number: 4 (lower is better)
Translates to: CCKYLLANPQPPPPGPRCQFPNT*VHPSQR
Trigger: GCGCTGAGATGGGTGAACCCATGTGTTTGGGAACTG...GCAGCGTGGACCAGGTGGGGGTGGCTGAGGATTTGCCAAGAGGTACTTGCAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CCA 90 bp AAGCCCACAAGGCTCACATGCCCGGGGTCCCATGTGCCTGGTCCTGTCACCTTTTCAGCAACCCCAACCTaGTCCATGCTGCAAGTACCT +
Preference number: 4 (lower is better)
Translates to: KPTRLTCPGSHVPGPVTFSATPT*SMLQVP
Trigger: AGGTACTTGCAGCATGGACCAGGTTGGGGTTGCTGA...AAAGGTGACAGGACCAGGCACATGGGACCCCGGGCATGTGAGCCTTGTGGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CCA 90 bp GCGTCTGTCTCTCATCGCGATGCCATCCTCATCCTGAGCCCCTGGACTCCTGTCGTGACAGGTGGAAGTTaGATGGGAACAACCCACCCA +
Preference number: 4 (lower is better)
Translates to: ASVSHRDAILILSPWTPVVTGGS*MGTTHP
Trigger: TGGGTGGGTTGTTCCCATCCAACTTCCACCTGTCAC...GACAGGAGTCCAGGGGCTCAGGATGAGGATGGCATCGCGATGAGAGACAGACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CCA 90 bp CAACATACACTTGTTGATGCCCGGCTCTGTGCCCGACAAGATGGTAGCTGTGGACCTTCCAGGGCCAGCTaGGACCCTCTGGAACCCCAA +
Preference number: 4 (lower is better)
Translates to: QHTLVDARLCARQDGSCGPSRAS*DPLEPQ
Trigger: TTGGGGTTCCAGAGGGTCCCAGCTGGCCCTGGAAGG...TCCACAGCTACCATCTTGTCGGGCACAGAGCCGGGCATCAACAAGTGTATGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CCA 90 bp CCATCGGCCACTGAAGATCTCAGCTCTCGTCAGCCTTGCAAAGCTTGCTGCATCCGGGTCTGCAGGAGCTaGGGTGGGGTCATTGTGAGT +
Preference number: 4 (lower is better)
Translates to: PSATEDLSSRQPCKACCIRVCRS*GGVIVS
Trigger: ACTCACAATGACCCCACCCCAGCTCCTGCAGACCCG...GATGCAGCAAGCTTTGCAAGGCTGACGAGAGCTGAGATCTTCAGTGGCCGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR TCA 90 bp TGGGCGGCCGCCGTCCAGAGAGAAACTCCTGCCACGTGTGTGAGGCTGACCGAACACCTTGGGCTAAGATaGTGTGATTCTTCCAAGGTT +
Preference number: 4 (lower is better)
Translates to: WAAAVQRETPATCVRLTEHLGLR*CDSSKV
Trigger: AACCTTGGAAGAATCACATCATCTTAGCCCAAGGTG...TTCGGTCAGCCTCACACACGTGGCAGGAGTTTCTCTCTGGACGGCGGCCGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR TCA 90 bp GTCCACCTGGACGTTGGCTACAGCTGCCTAACCTGTGGCTGCACCTTGGTCCACCTAACATGCTGGTCTTaGCCCCTCAGCAATGTGGTT +
Preference number: 4 (lower is better)
Translates to: VHLDVGYSCLTCGCTLVHLTCWS*PLSNVV
Trigger: AACCACATTGCTGAGGGGTCAAGACCAGCATGTTAG...GTGGACCAAGGTGCAGCCACAGGTTAGGCAGCTGTAGCCAACGTCCAGGTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR TCA 90 bp TCCATGCTGCAAGTACCTCTTGGCAAATCCTCAGCCACCCCCACCTGGTCCACGCACCTTTCCCCCTTCTaGGACTCACTCAATGCCTCT +
Preference number: 4 (lower is better)
Translates to: SMLQVPLGKSSATPTWSTHLSPF*DSLNAS
Trigger: AGAGGCATTGAGTGAGTCTCAGAAGGGGGAAAGGTG...CGTGGACCAGGTGGGGGTGGCTGAGGATTTGCCAAGAGGTACTTGCAGCATGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR TCA 90 bp GGACTTGGGCACTGCCTCATTCAAGCCACCTTGGAGCAGACGTGGCTACGCTCCCCCCGGGACAAAAACTaGACACAGTTCAGAGACACA +
Preference number: 4 (lower is better)
Translates to: GLGHCLIQATLEQTWLRSPRDKN*TQFRDT
Trigger: TGTGTCTCTGAACTGTGTTCAGTTTTTGTCCCGGGG...GGAGCGTAGCCACGTCTGCTCCAAGGTGGCTTGAATGAGGCAGTGCCCAAGTCC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR TCA 90 bp CCCAGACAGGTACGGCCAGAGCACTGCTCCCAGGAATTTGGAGTTGATACCTGGCAGGGGAGGCGTGTCTaGCCCTTCACCATTGGAAAT +
Preference number: 4 (lower is better)
Translates to: PRQVRPEHCSQEFGVDTWQGRRV*PFTIGN
Trigger: ATTTCCAATGGTGAAGGGTCAGACACGCCTCCCCTG...CCAGGTATCAACTCCAAATTCCTGGGAGCAGTGCTCTGGCCGTACCTGTCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR GCA 90 bp TCTCTCTTCCGTCGCCCGCGGGCCCTGCTTCCTCCTCCAGTGTCGTTTCTCATGCAGCACACAACAGTTTaGATGAAAAGGATGCCCGGT +
Preference number: 4 (lower is better)
Translates to: SLFRRPRALLPPPVSFLMQHTTV*MKRMPG
Trigger: ACCGGGCATCCTTTTCATGCAAACTGTTGTGTGCTG...CATGAGAAACGACACTGGAGGAGGAAGCAGGGCCCGCGGGCGACGGAAGAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR GCA 90 bp TTAAGTACTTGCTGTAAGAGGCCTGACAACCCACCAGAAACAGATGCCCGCCTGGCCCGGGGTCCCATGTaGCTGGTCCTGTCACCTTTC +
Preference number: 4 (lower is better)
Translates to: LSTCCKRPDNPPETDARLARGPM*LVLSPF
Trigger: GAAAGGTGACAGGACCAGGCACATGGGACCCCGGGC...CAGGCGGGCATCTGTTTCTGGTGGGTTGTCAGGCCTCTTACAGCAAGTACTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR GCA 90 bp GCACTGCCTCATTCAAGCCACCTTGGAGCAGACGTGGCTACGCTCCCAGCAGCCGGGCTCCCGGTCCACTaGTTAAAAAGTTACTATCAC +
Preference number: 4 (lower is better)
Translates to: ALPHSSHLGADVATLPAAGLPVH*LKSYYH
Trigger: GTGATAGTAACTTTTTAAGCAGTGGACCGGGAGCCC...GGCTGCTGGGAGCGTAGCCACGTCTGCTCCAAGGTGGCTTGAATGAGGCAGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR CCA 90 bp TCTCTCTTCCGTCGCCCGCGGGCCCTGCTTCCTCCTCCAGTGTCGTTTCTCATGAGCAGCGTTTTCATGTaGTACAGGATGGACACGTCT +
Preference number: 4 (lower is better)
Translates to: SLFRRPRALLPPPVSFLMSSVFM*YRMDTS
Trigger: AGACGTGTCCATCCTGTACCACATGAAAACGCTGCT...CATGAGAAACGACACTGGAGGAGGAAGCAGGGCCCGCGGGCGACGGAAGAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CCA 90 bp TGGGCGGCCGCCGTCCAGAGAGAAACTCCTGCCACGTGTGTGAGGCTGACCGAACATCGTGCAATGTTCTaGGAACATTTCCAGAGCATG +
Preference number: 4 (lower is better)
Translates to: WAAAVQRETPATCVRLTEHRAMF*EHFQSM
Trigger: CATGCTCTGGAAATGTTCCCAGAACATTGCACGATG...TTCGGTCAGCCTCACACACGTGGCAGGAGTTTCTCTCTGGACGGCGGCCGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CCA 90 bp AACCCCAACCTGGTCCATGCTGCAAGTACCTCTTGGCAAATCCTCAGCCACCCCAACCTGAGGTCTGACTaGCACCTGCATAGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: NPNLVHAASTSWQILSHPNLRSD*HLHSCP
Trigger: TGGGCAGCTATGCAGGTGCCAGTCAGACCTCAGGTT...GGGGTGGCTGAGGATTTGCCAAGAGGTACTTGCAGCATGGACCAGGTTGGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522893.1
3UTR CAA 72 bp CCAGACAGGTACGGCCAGAGCACTGCTCCCAGGAATTaGGAGTTGATACCTGGGGACCACAACACGCACATC +
Preference number: 4 (lower is better)
Translates to: PDRYGQSTAPRN*ELIPGDHNTHI
Trigger: GATGTGCGTGTTGTGGTCCCCAGGTATCAACTCCAAATTCCTGGGAGCAGTGCTCTGGCCGTACCTGTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR CAA 72 bp CTGAGCCACAGGCTCACCTCAGCCAGTCAAAAGGACTaGGGCACTGCCTCATTCAAGCCACCTTGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: LSHRLTSASQKD*GTASFKPPWSR
Trigger: TCTGCTCCAAGGTGGCTTGAATGAGGCAGTGCCCAAGTCCTTTTGACTGGCTGAGGTGAGCCTGTGGCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR TCA 90 bp TGCTGCAAGTACCTCTTGGCAAATCCTCAGCCACCCCCACCTGGTCCACGCTGCAGAGGCAAACCTCGATaGGAGTATCTTAAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: CCKYLLANPQPPPPGPRCRGKPR*EYLKQD
Trigger: GTCCTGCTTAAGATACTCTCATCGAGGTTTGCCTCT...GCAGCGTGGACCAGGTGGGGGTGGCTGAGGATTTGCCAAGAGGTACTTGCAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR TCA 90 bp AACCCCAACCTGGTCCATGCTGCAAGTACCTCTTGGCAAATCCTCAGCCACCCCTTTGGCTCCAAGAGTTaGCAGCTCCCAAGTCCGGAA +
Preference number: 4 (lower is better)
Translates to: NPNLVHAASTSWQILSHPFGSKS*QLPSPE
Trigger: TTCCGGACTTGGGAGCTGTCAACTCTTGGAGCCAAA...GGGGTGGCTGAGGATTTGCCAAGAGGTACTTGCAGCATGGACCAGGTTGGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR TCA 90 bp AACCCCAACCTGGTCCATGCTGCAAGTACCTCTTGGCAAATCCTCAGCCACCCCCAGGTTTCTGTGGCCTaGATACCCTCACCACAGCTT +
Preference number: 4 (lower is better)
Translates to: NPNLVHAASTSWQILSHPQVSVA*IPSPQL
Trigger: AAGCTGTGGTGAGGGTATTCAGGCCACAGAAACCTG...GGGGTGGCTGAGGATTTGCCAAGAGGTACTTGCAGCATGGACCAGGTTGGGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR TCA 90 bp TGCTGCAAGTACCTCTTGGCAAATCCTCAGCCACCCCCACCTGGTCCACGCTGCTCCCGACACTTACTCTaGAACTCCCTCCACAAAATC +
Preference number: 4 (lower is better)
Translates to: CCKYLLANPQPPPPGPRCSRHLL*NSLHKI
Trigger: GATTTTGTGGAGGGAGTTTCAGAGTAAGTGTCGGGA...GCAGCGTGGACCAGGTGGGGGTGGCTGAGGATTTGCCAAGAGGTACTTGCAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR TCA 90 bp TTGTTGATGCCCGGCTCTGTGCCCGACAAGATGGTAGCTGTGGAGACTGATCTGGGTTCCTCAGTTGCATaGCACCAAGGAGCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: LLMPGSVPDKMVAVETDLGSSVA*HQGAAV
Trigger: GACAGCAGCTCCTTGGTGTCATGCAACTGAGGAACC...CAGATCAGTCTCCACAGCTACCATCTTGTCGGGCACAGAGCCGGGCATCAACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR GCA 90 bp CGGCCACTGAAGATCTCAGCTCTCGTCAGCCTTGCAAAGCTTGCTGCATCTGAGCCAGAGAGAAACTCCTaGCACGTGTGTGAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: RPLKISALVSLAKLAASEPERNS*HVCEAD
Trigger: GTCAGCCTCACACACGTGGCAGGAGTTTCTCTCTGG...CTCAGATGCAGCAAGCTTTGCAAGGCTGACGAGAGCTGAGATCTTCAGTGGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR GCA 90 bp AGACGTTTGGGAACTGTTGGAGACACACACACATTCTCAGCCCATCACTCCGCCGAACTATCCCTGATCTaGCCAGGGGAGGCGTGTCTG +
Preference number: 4 (lower is better)
Translates to: RRLGTVGDTHTFSAHHSAELSLI*PGEACL
Trigger: CAGACACGCCTCCCCTGGGCAGATCAGGGATAGTTC...GGCGGAGTGATGGGCTGAGAATGTGTGTGTGTCTCCAACAGTTCCCAAACGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CCA 90 bp GCACTGCCTCATTCAAGCCACCTTGGAGCAGACGTGGCTACGCTCCCAGCAGCCCATCGTGCAATGTTCTaGGAACATTTCCAGAGCATG +
Preference number: 4 (lower is better)
Translates to: ALPHSSHLGADVATLPAAHRAMF*EHFQSM
Trigger: CATGCTCTGGAAATGTTCCCAGAACATTGCACGATG...GGCTGCTGGGAGCGTAGCCACGTCTGCTCCAAGGTGGCTTGAATGAGGCAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR CCA 90 bp TCAGCAACCCCAACCTGGTCCATGCTGCAAGTACCTCTTGGCAAATCCTCAGCCCACCGCACACGGCATTaGGAAGACATGAGCACAGCT +
Preference number: 4 (lower is better)
Translates to: SATPTWSMLQVPLGKSSAHRTRH*EDMSTA
Trigger: AGCTGTGCTCATGTCTTCCCAATGCCGTGTGCGGTG...GGCTGAGGATTTGCCAAGAGGTACTTGCAGCATGGACCAGGTTGGGGTTGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CCA 90 bp CTCCAGCACCCATATGCTCTGCACGCTGTGACTCCAGCCTTGTGGTCCCTGCAGTGGTGTGCAGGTGAATaGCTCAACAGCCTGAATTTC +
Preference number: 4 (lower is better)
Translates to: LQHPYALHAVTPALWSLQWCAGE*LNSLNF
Trigger: GAAATTCAGGCTGTTGAGCCATTCACCTGCACACCA...CTGCAGGGACCACAAGGCTGGAGTCACAGCGTGCAGAGCATATGGGTGCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CCA 90 bp CTCCAGCACCCATATGCTCTGCACGCTGTGACTCCAGCCTTGTGGTCCCTGCAGATCTCACCGAGTATCTaGCTTCTTTTCCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: LQHPYALHAVTPALWSLQISPSI*LLFQLL
Trigger: GAGGAGCTGGAAAAGAAGCCAGATACTCGGTGAGAT...CTGCAGGGACCACAAGGCTGGAGTCACAGCGTGCAGAGCATATGGGTGCTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CCA 90 bp TCCAGGATCTATCTGCAGCTCTATGACGCATCTCACCGAGTATCTGGCTTCTTTAAACAGATGCCCGCCTaGGGCCAACGCCGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: SRIYLQLYDASHRVSGFFKQMPA*GQRRPL
Trigger: GAGAGGGCGGCGTTGGCCCCAGGCGGGCATCTGTTT...AAAGAAGCCAGATACTCGGTGAGATGCGTCATAGAGCTGCAGATAGATCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CCA 90 bp TTGTTGATGCCCGGCTCTGTGCCCGACAAGATGGTAGCTGTGGAGACTGATCTGCAGGTGGAAGTTGGATaGGAACAACCCACCCAGCCA +
Preference number: 4 (lower is better)
Translates to: LLMPGSVPDKMVAVETDLQVEVG*EQPTQP
Trigger: TGGCTGGGTGGGTTGTTCCCATCCAACTTCCACCTG...CAGATCAGTCTCCACAGCTACCATCTTGTCGGGCACAGAGCCGGGCATCAACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR CCA 90 bp CCATCGGCCACTGAAGATCTCAGCTCTCGTCAGCCTTGCAAAGCTTGCTGCATCAAGCGGATTCAGCGCTaGCCAACAAACCCAGACAGG +
Preference number: 4 (lower is better)
Translates to: PSATEDLSSRQPCKACCIKRIQR*PTNPDR
Trigger: CCTGTCTGGGTTTGTTGGCCAGCGCTGAATCCGCTT...GATGCAGCAAGCTTTGCAAGGCTGACGAGAGCTGAGATCTTCAGTGGCCGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR CAA 72 bp GTGCACAGTTGTAGGCCTGTCTCAAGTGTTCCGTCGTaGACTTGTGTCCCGCCTCGCCGGGCAATGATGTAT +
Preference number: 4 (lower is better)
Translates to: VHSCRPVSSVPS*TCVPPRRAMMY
Trigger: ATACATCATTGCCCGGCGAGGCGGGACACAAGTCAACGACGGAACACTTGAGACAGGCCTACAACTGTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR TCA 90 bp GGCATAAATGTCTTTCAAGTTCCCAGAGAACTAACTCTAAGCCCATCTCACATTCACGGCGCGCGGTCCTaGGCTGAGCGCCGTGCCTTC +
Preference number: 4 (lower is better)
Translates to: GINVFQVPRELTLSPSHIHGARS*AERRAF
Trigger: GAAGGCACGGCGCTCAGCTCAGGACCGCGCGCCGTG...AATGTGAGATGGGCTTAGAGTTAGTTCTCTGGGAACTTGAAAGACATTTATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262109.8
CDS-3UTR TCA 90 bp TCCATGCTGCAAGTACCTCTTGGCAAATCCTCAGCCACCCCCACCTGGTCCACGACACAACAGTTTGCATaGAAAGGATGCCCGGTGAAG +
Preference number: 4 (lower is better)
Translates to: SMLQVPLGKSSATPTWSTTQQFA*KGCPVK
Trigger: CTTCACCGGGCATCCTTTTCATGCAAACTGTTGTGT...CGTGGACCAGGTGGGGGTGGCTGAGGATTTGCCAAGAGGTACTTGCAGCATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR TCA 90 bp CCCACAAGGCTCACATGCCCGGGGTCCCATGTGCCTGGTCCTGTCACCTTTCCCAATGGCTCAACAGCCTaGATTTCTGATTTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: PTRLTCPGSHVPGPVTFPNGSTA*ISDFQH
Trigger: ATGCTGAAAATCAGAAATTCAGGCTGTTGAGCCATT...GGGAAAGGTGACAGGACCAGGCACATGGGACCCCGGGCATGTGAGCCTTGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR TCA 90 bp TTAAGTACTTGCTGTAAGAGGCCTGACAACCCACCAGAAACAGATGCCCGCCTGAAGCCAACAGCTCCTTaGCGGATGAGGGCGTTCTGC +
Preference number: 4 (lower is better)
Translates to: LSTCCKRPDNPPETDARLKPTAP*RMRAFC
Trigger: GCAGAACGCCCTCATCCGTCAAGGAGCTGTTGGCTT...CAGGCGGGCATCTGTTTCTGGTGGGTTGTCAGGCCTCTTACAGCAAGTACTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR TCA 90 bp GGACTTGGGCACTGCCTCATTCAAGCCACCTTGGAGCAGACGTGGCTACGCTCCGGAGGTTTACTCGAGTaGGAATTGAGTGGAATGACA +
Preference number: 4 (lower is better)
Translates to: GLGHCLIQATLEQTWLRSGGLLE*ELSGMT
Trigger: TGTCATTCCACTCAATTCTCACTCGAGTAAACCTCC...GGAGCGTAGCCACGTCTGCTCCAAGGTGGCTTGAATGAGGCAGTGCCCAAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR GCA 90 bp ATCAATTCATTCTTTATTCAACATACACTTGTTGATGCCCGGCTCTGTGCCCGACGCCATGCGGGACCCTaGCGCGGACCTCAGACCACG +
Preference number: 4 (lower is better)
Translates to: INSFFIQHTLVDARLCARRHAGP*RGPQTT
Trigger: CGTGGTCTGAGGTCCGCGGCAGGGTCCCGCATGGCG...TCGGGCACAGAGCCGGGCATCAACAAGTGTATGTTGAATAAAGAATGAATTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522706.5
CDS-3UTR GCA 90 bp TTGATGCCCGGCTCTGTGCCCGACAAGATGGTAGCTGTGGAGACTGATCTGAAACTTCCCCTTCATTGCTaGTGTCCTCGGGCTGGTACA +
Preference number: 4 (lower is better)
Translates to: LMPGSVPDKMVAVETDLKLPLHC*CPRAGT
Trigger: TGTACCAGCCCGAGGACAGCAGCAATGAAGGGGAAG...TTTCAGATCAGTCTCCACAGCTACCATCTTGTCGGGCACAGAGCCGGGCATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522706.5
CDS-3UTR GCA 90 bp GCTGCTGTCTGGGAAATGCACTTATTAGGAGAGGGACAAACTGTGACTGAGCCACGTCTGAGGGCAGCATaGTGTGTGACGCAAGGCGGT +
Preference number: 4 (lower is better)
Translates to: AAVWEMHLLGEGQTVTEPRLRAA*CVTQGG
Trigger: ACCGCCTTGCGTCACACAGCATGCTGCCCTCAGACG...TGGCTCAGTCACAGTTTGTCCCTCTCCTAATAAGTGCATTTCCCAGACAGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR GCA 90 bp CTCCAGCACCCATATGCTCTGCACGCTGTGACTCCAGCCTTGTGGTCCCTGCAGAATCTCTCAGTATCTTaGAGGAGCAGCAGCGTTTTC +
Preference number: 4 (lower is better)
Translates to: LQHPYALHAVTPALWSLQNLSVS*RSSSVF
Trigger: GAAAACGCTGCTGCTCCTGCAAGATACTGAGAGATT...CTGCAGGGACCACAAGGCTGGAGTCACAGCGTGCAGAGCATATGGGTGCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR GCA 90 bp TCTCTCTTCCGTCGCCCGCGGGCCCTGCTTCCTCCTCCAGTGTCGTTTCTCATGCTGATTTTCAGCATTTaGAGGTTTCTGTGGCCTGAA +
Preference number: 4 (lower is better)
Translates to: SLFRRPRALLPPPVSFLMLIFSI*RFLWPE
Trigger: TTCAGGCCACAGAAACCTGCAAATGCTGAAAATCAG...CATGAGAAACGACACTGGAGGAGGAAGCAGGGCCCGCGGGCGACGGAAGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR GCA 90 bp GGCTCCTCGCAGTTCCCAAACACATGGGTTCACCCATCTCAGCGCATGCGCACTTCTCCAGGATCTATCTaGAGCTCTATGACGCATCTC +
Preference number: 4 (lower is better)
Translates to: GSSQFPNTWVHPSQRMRTSPGSI*SSMTHL
Trigger: GAGATGCGTCATAGAGCTGCAGATAGATCCTGGAGA...AGTGCGCATGCGCTGAGATGGGTGAACCCATGTGTTTGGGAACTGCGAGGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR GCA 90 bp TCCATGCTGCAAGTACCTCTTGGCAAATCCTCAGCCACCCCCACCTGGTCCACGCAACCTGGTCCATGCTaGAAGTACCTCTTGGCAAAT +
Preference number: 4 (lower is better)
Translates to: SMLQVPLGKSSATPTWSTQPGPC*KYLLAN
Trigger: ATTTGCCAAGAGGTACTTGCAGCATGGACCAGGTTG...CGTGGACCAGGTGGGGGTGGCTGAGGATTTGCCAAGAGGTACTTGCAGCATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR GCA 90 bp AGTCTTGGGCTCCCGGTCCACTGCTTAAAAAGTTACTATCACACAAAGTCGAAACTGTGGCTGACGGCCTaGCCAGAGGGTGGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: SLGLPVHCLKSYYHTKSKLWLTA*PEGGLP
Trigger: AGGCAGGCCACCCTCTGGGCAGGCCGTCAGCCACAG...TTTCGACTTTGTGTGATAGTAACTTTTTAAGCAGTGGACCGGGAGCCCAAGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CCA 90 bp CATCGGCCACTGAAGATCTCAGCTCTCGTCAGCCTTGCAAAGCTTGCTGCATCTCAGGTGGAAGTTGGATaGGAACAACCCACCCAGCCA +
Preference number: 4 (lower is better)
Translates to: HRPLKISALVSLAKLAASQVEVG*EQPTQP
Trigger: TGGCTGGGTGGGTTGTTCCCATCCAACTTCCACCTG...AGATGCAGCAAGCTTTGCAAGGCTGACGAGAGCTGAGATCTTCAGTGGCCGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR CCA 90 bp TATGAACTATCCCTGATCTGCCCAGGGGAGGCGTGTCTGACCCTTCACCATTGGACCAAGCTCTCGTCATaGTGTCCGACACTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: YELSLICPGEACLTLHHWTKLSS*CPTLPS
Trigger: AGAAGGGAGTGTCGGACACCATGACGAGAGCTTGGT...CCAATGGTGAAGGGTCAGACACGCCTCCCCTGGGCAGATCAGGGATAGTTCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CCA 90 bp ATCCTTCGTGACAGGTGGAAGTTGGATGGGAACAACCCACCCAGCCAATTAGGTCACCCCATGCTCTCCTaGCTAAGCGGATTCAGCGCT +
Preference number: 4 (lower is better)
Translates to: ILRDRWKLDGNNPPSQLGHPMLS*LSGFSA
Trigger: AGCGCTGAATCCGCTTAGCCAGGAGAGCATGGGGTG...ACCTAATTGGCTGGGTGGGTTGTTCCCATCCAACTTCCACCTGTCACGAAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CCA 90 bp CCACTGAAGATCTCAGCTCTCGTCAGCCTTGCAAAGCTTGCTGCATCTGAGTCTGTGGCAGGACAAGCATaGGGCAAGAGGGACGCGTTA +
Preference number: 4 (lower is better)
Translates to: PLKISALVSLAKLAASESVAGQA*GKRDAL
Trigger: TAACGCGTCCCTCTTGCCCCATGCTTGTCCTGCCAC...AGACTCAGATGCAGCAAGCTTTGCAAGGCTGACGAGAGCTGAGATCTTCAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR CAA 72 bp GCTAAGGAAATGCTGGCGGTTGGAACCTGTTCATTCTaGCCTAGAGTAAGGTACCTTCCAGGGCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: AKEMLAVGTCSF*PRVRYLPGPAG
Trigger: CCCAGCTGGCCCTGGAAGGTACCTTACTCTAGGCAAGAATGAACAGGTTCCAACCGCCAGCATTTCCTTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR CAA 72 bp CATTCCTGCAAAGGGAAGGCTCAGACAATGGCAGTGTaGATTACGGAGGTGATGGCTGCAGCTGCAGACAGC +
Preference number: 4 (lower is better)
Translates to: HSCKGKAQTMAV*ITEVMAAAADS
Trigger: GCTGTCTGCAGCTGCAGCCATCACCTCCGTAATCAACACTGCCATTGTCTGAGCCTTCCCTTTGCAGGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR TCA 90 bp GCTGCTGTCTGGGAAATGCACTTATTAGGAGAGGGACAAACTGTGACTGAGCCAATCTGCGAGGGCAGCTaGAGCTGCATCTCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: AAVWEMHLLGEGQTVTEPICEGS*SCISGD
Trigger: GTCTCCAGAGATGCAGCTTCAGCTGCCCTCGCAGAT...TGGCTCAGTCACAGTTTGTCCCTCTCCTAATAAGTGCATTTCCCAGACAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR TCA 90 bp CTGAAGATCTCAGCTCTCGTCAGCCTTGCAAAGCTTGCTGCATCTGAGTCTTGGGTACCCATCGGCCACTaGAGATCTCAGCTCTCGTCA +
Preference number: 4 (lower is better)
Translates to: LKISALVSLAKLAASESWVPIGH*RSQLSS
Trigger: TGACGAGAGCTGAGATCTTCAGTGGCCGATGGGTAC...CCAAGACTCAGATGCAGCAAGCTTTGCAAGGCTGACGAGAGCTGAGATCTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR TCA 90 bp CTCTCCTGGCTAAGCGGATTCAGCGCTGGCCAACAAACCCAGACAGGTACGGCCGAAAATCCCATTCTCTaGCAATTCTACTCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: LSWLSGFSAGQQTQTGTAENPIL*QFYSEP
Trigger: TGGCTCTGAGTAGAATTGTCAGAGAATGGGATTTTC...GGCCGTACCTGTCTGGGTTTGTTGGCCAGCGCTGAATCCGCTTAGCCAGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR TCA 90 bp CCGTCGTTGACTTGTGTCCCGCCTCGCCGGGCAATGATGTATGTGTGGAGCGCAATTGTCTGTAGAGTCTaGCATACAAATTGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: PSLTCVPPRRAMMYVWSAIVCRV*HTNCWE
Trigger: CTCCCAGCAATTTGTATGTCAGACTCTACAGACAAT...TGCGCTCCACACATACATCATTGCCCGGCGAGGCGGGACACAAGTCAACGACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR GCA 90 bp CTTTCAAGTTCCCAGAGAACTAACTCTAAGCCCATCTCACATTTGTCTTTTAAGTCCTGTGCGCCGCCATaGGGGACCCTGCCGCGGACC +
Preference number: 4 (lower is better)
Translates to: LSSSQRTNSKPISHLSFKSCAPP*GTLPRT
Trigger: GGTCCGCGGCAGGGTCCCGCATGGCGGCGCACAGGA...CTTAAAAGACAAATGTGAGATGGGCTTAGAGTTAGTTCTCTGGGAACTTGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262109.8
CDS-3UTR GCA 90 bp TTGCAAAGCTTGCTGCATCTGAGTCTTGGGCTCCCGGTCCACTGCTTAAAAAGTGACACCAGCAGCCTTTaGTGCCAAGCCGGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: LQSLLHLSLGLPVHCLKSDTSSL*CQAGCF
Trigger: AAAGCAGCCGGCTTGGCAGCAAAGGCTGCTGGTGTC...ACTTTTTAAGCAGTGGACCGGGAGCCCAAGACTCAGATGCAGCAAGCTTTGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522706.5
CDS-3UTR GCA 90 bp GTCCACCTGGACGTTGGCTACAGCTGCCTAACCTGTGGCTGCACCTTGGTCCACCTCCCATGCCATATGTaGAGTGTCATATTTTCCAAC +
Preference number: 4 (lower is better)
Translates to: VHLDVGYSCLTCGCTLVHLPCHM*SVIFSN
Trigger: GTTGGAAAATATGACACTGCACATATGGCATGGGAG...GTGGACCAAGGTGCAGCCACAGGTTAGGCAGCTGTAGCCAACGTCCAGGTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR GCA 90 bp CTCCAGCACCCATATGCTCTGCACGCTGTGACTCCAGCCTTGTGGTCCCTGCAGGACTCTATTCTCCCATaGCATATGTGCAGTGTCATA +
Preference number: 4 (lower is better)
Translates to: LQHPYALHAVTPALWSLQDSILP*HMCSVI
Trigger: TATGACACTGCACATATGGCATGGGAGAATAGAGTC...CTGCAGGGACCACAAGGCTGGAGTCACAGCGTGCAGAGCATATGGGTGCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR GCA 90 bp TCAGCAACCCCAACCTGGTCCATGCTGCAAGTACCTCTTGGCAAATCCTCAGCCACCTTCTCCACCTTCTaGAACTCACATCCATCCCCT +
Preference number: 4 (lower is better)
Translates to: SATPTWSMLQVPLGKSSATFSTF*NSHPSP
Trigger: AGGGGATGGATGTGAGTTGCAGAAGGTGGAGAAGGT...GGCTGAGGATTTGCCAAGAGGTACTTGCAGCATGGACCAGGTTGGGGTTGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR GCA 90 bp CTCTCCTCCCTGCACTCCGGGCCTTATGGCCCTCTTGAGCCTCAGCTGGAACCTAGTTTGTTAAGTACTTaGTGTAAGAGGCCTGACAAC +
Preference number: 4 (lower is better)
Translates to: LSSLHSGPYGPLEPQLEPSLLST*CKRPDN
Trigger: GTTGTCAGGCCTCTTACAGCAAGTACTTAACAAACT...AGGTTCCAGCTGAGGCTCAAGAGGGCCATAAGGCCCGGAGTGCAGGGAGGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR GCA 90 bp CTCCCGGTCCACTGCTTAAAAAGTTACTATCACACAAAGTCGAAAGTAGACAGTAGCCTCTGCCGGGTCTaGAGGAGCTGGGGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: LPVHCLKSYYHTKSKVDSSLCRV*RSWGGV
Trigger: GACCCCACCCCAGCTCCTGCAGACCCGGCAGAGGCT...ACTGTCTACTTTCGACTTTGTGTGATAGTAACTTTTTAAGCAGTGGACCGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR GCA 90 bp CCAGGGAGAGCTAAGGAAATGCTGGCGGTTGGAACCTGTTCATTCTTGCCTAGATCTACGAGGCCTGGGTaGACTGACACCATTCCTGCA +
Preference number: 4 (lower is better)
Translates to: PGRAKEMLAVGTCSFLPRSTRPG*TDTIPA
Trigger: TGCAGGAATGGTGTCAGTGCACCCAGGCCTCGTAGA...TCTAGGCAAGAATGAACAGGTTCCAACCGCCAGCATTTCCTTAGCTCTCCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CCA 90 bp GAGGGACAAACTGTGACTGAGCCACAGGCTCACCTCAGCCAGTCAAAAGGACTTTCATGTGGTACAGGATaGACACGTCTGAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: EGQTVTEPQAHLSQSKGLSCGTG*TRLRAA
Trigger: TGCTGCCCTCAGACGTGTCCATCCTGTACCACATGA...AAGTCCTTTTGACTGGCTGAGGTGAGCCTGTGGCTCAGTCACAGTTTGTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR CCA 90 bp GGCTCCTCGCAGTTCCCAAACACATGGGTTCACCCATCTCAGCGCATGCGCACTCATCGTGCAATGTTCTaGGAACATTTCCAGAGCATG +
Preference number: 4 (lower is better)
Translates to: GSSQFPNTWVHPSQRMRTHRAMF*EHFQSM
Trigger: CATGCTCTGGAAATGTTCCCAGAACATTGCACGATG...AGTGCGCATGCGCTGAGATGGGTGAACCCATGTGTTTGGGAACTGCGAGGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CCA 90 bp GACTTGTGTCCCGCCTCGCCGGGCAATGATGTATGTGTGGAGCGCAGTCATGTTCACAACACGCACATCTaGGAACTGGAGCTGAAAAAC +
Preference number: 4 (lower is better)
Translates to: DLCPASPGNDVCVERSHVHNTHI*ELELKN
Trigger: GTTTTTCAGCTCCAGTTCCCAGATGTGCGTGTTGTG...AACATGACTGCGCTCCACACATACATCATTGCCCGGCGAGGCGGGACACAAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CCA 90 bp CCCTCAGCAATGTGGTTTCTACGGACAGAAACCACTCCCGACACTTACTCTGAAGGTCCACCTGGACGTTaGCTACAGCTGCCTAACCTG +
Preference number: 4 (lower is better)
Translates to: PSAMWFLRTETTPDTYSEGPPGR*LQLPNL
Trigger: CAGGTTAGGCAGCTGTAGCCAACGTCCAGGTGGACC...TTCAGAGTAAGTGTCGGGAGTGGTTTCTGTCCGTAGAAACCACATTGCTGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CCA 90 bp TTAAGTACTTGCTGTAAGAGGCCTGACAACCCACCAGAAACAGATGCCCGCCTGCTGGTTCTACCTCCATaGTCCACCTGGACGTTGGCT +
Preference number: 4 (lower is better)
Translates to: LSTCCKRPDNPPETDARLLVLPP*STWTLA
Trigger: AGCCAACGTCCAGGTGGACCATGGAGGTAGAACCAG...CAGGCGGGCATCTGTTTCTGGTGGGTTGTCAGGCCTCTTACAGCAAGTACTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CCA 90 bp CATTCCTGCAAAGGGAAGGCTCAGACAATGGCAGTGTTGATTACGGAGGTGATGGCTGCATCTGAGTCTTaGGCTCCCGGTCCACTGCTT +
Preference number: 4 (lower is better)
Translates to: HSCKGKAQTMAVLITEVMAASES*APGPLL
Trigger: AAGCAGTGGACCGGGAGCCCAAGACTCAGATGCAGC...CATCACCTCCGTAATCAACACTGCCATTGTCTGAGCCTTCCCTTTGCAGGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CCA 90 bp GACTTGTGTCCCGCCTCGCCGGGCAATGATGTATGTGTGGAGCGCAGTCATGTTGAGCTAAGGAAATGCTaGCGGTTGGAACCTGTTCAT +
Preference number: 4 (lower is better)
Translates to: DLCPASPGNDVCVERSHVELRKC*RLEPVH
Trigger: ATGAACAGGTTCCAACCGCCAGCATTTCCTTAGCTC...AACATGACTGCGCTCCACACATACATCATTGCCCGGCGAGGCGGGACACAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CCA 90 bp TTGCAAAGCTTGCTGCATCTGAGTCTTGGGCTCCCGGTCCACTGCTTAAAAAGTCTCATCCTGAGCCCCTaGACTCCTGTCCTGTCTCTC +
Preference number: 4 (lower is better)
Translates to: LQSLLHLSLGLPVHCLKSLILSP*TPVLSL
Trigger: GAGAGACAGGACAGGAGTCCAGGGGCTCAGGATGAG...ACTTTTTAAGCAGTGGACCGGGAGCCCAAGACTCAGATGCAGCAAGCTTTGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CCA 90 bp TCGTCAGCCTTGCAAAGCTTGCTGCATCTGAGTCTTGGGCTCCCGGTCCACTGCACGTTTGGGAACTGTTaGAGACACACACACATTCTC +
Preference number: 4 (lower is better)
Translates to: SSALQSLLHLSLGLPVHCTFGNC*RHTHIL
Trigger: GAGAATGTGTGTGTGTCTCCAACAGTTCCCAAACGT...GCAGTGGACCGGGAGCCCAAGACTCAGATGCAGCAAGCTTTGCAAGGCTGACGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CCA 90 bp CTCTCCTGGCTAAGCGGATTCAGCGCTGGCCAACAAACCCAGACAGGTACGGCCCTTAATGGACTGTCCTaGAAAGGTAGTCAGTCTAGT +
Preference number: 4 (lower is better)
Translates to: LSWLSGFSAGQQTQTGTALNGLS*KGSQSS
Trigger: ACTAGACTGACTACCTTTCCAGGACAGTCCATTAAG...GGCCGTACCTGTCTGGGTTTGTTGGCCAGCGCTGAATCCGCTTAGCCAGGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CCA 90 bp TTGATGCCCGGCTCTGTGCCCGACAAGATGGTAGCTGTGGAGACTGATCTGAAAGGTCACAATAGTGCCTaGGGTGGCTGTCATCTCTAC +
Preference number: 4 (lower is better)
Translates to: LMPGSVPDKMVAVETDLKGHNSA*GGCHLY
Trigger: GTAGAGATGACAGCCACCCCAGGCACTATTGTGACC...TTTCAGATCAGTCTCCACAGCTACCATCTTGTCGGGCACAGAGCCGGGCATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR TCA 90 bp TTGTTGATGCCCGGCTCTGTGCCCGACAAGATGGTAGCTGTGGAGACTGATCTGTCTGTGTGCTGTCGCTaGGATTTCTCCTGTAACAGA +
Preference number: 4 (lower is better)
Translates to: LLMPGSVPDKMVAVETDLSVCCR*DFSCNR
Trigger: TCTGTTACAGGAGAAATCTCAGCGACAGCACACAGA...CAGATCAGTCTCCACAGCTACCATCTTGTCGGGCACAGAGCCGGGCATCAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522706.5
CDS-3UTR TCA 90 bp GGAGGTAAGCAAAAATTTACCATCTACCACAGCAGTAGAGGAGAAGGAAAAGAGTGGGATAGGTGCCACTaGCGGGTGCCACGGACCCTC +
Preference number: 4 (lower is better)
Translates to: GGKQKFTIYHSSRGEGKEWDRCH*RVPRTL
Trigger: GAGGGTCCGTGGCACCCGTCAGTGGCACCTATCCCA...CTCTTTTCCTTCTCCTCTACTGCTGTGGTAGATGGTAAATTTTTGCTTACCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR TCA 90 bp TTGTTGATGCCCGGCTCTGTGCCCGACAAGATGGTAGCTGTGGAGACTGATCTGAAAAAGCATCCTTCGTaGCAGGTGGAAGTTGGATGG +
Preference number: 4 (lower is better)
Translates to: LLMPGSVPDKMVAVETDLKKHPS*QVEVGW
Trigger: CCATCCAACTTCCACCTGTCACGAAGGATGCTTTTT...CAGATCAGTCTCCACAGCTACCATCTTGTCGGGCACAGAGCCGGGCATCAACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR TCA 90 bp TATGAACTATCCCTGATCTGCCCAGGGGAGGCGTGTCTGACCCTTCACCATTGGAAAAAGCATCCTTCGTaGCAGGTGGAAGTTGGATGG +
Preference number: 4 (lower is better)
Translates to: YELSLICPGEACLTLHHWKKHPS*QVEVGW
Trigger: CCATCCAACTTCCACCTGTCACGAAGGATGCTTTTT...CCAATGGTGAAGGGTCAGACACGCCTCCCCTGGGCAGATCAGGGATAGTTCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR TCA 90 bp CCATCGGCCACTGAAGATCTCAGCTCTCGTCAGCCTTGCAAAGCTTGCTGCATCGGTAGCTGTGGAGACTaGTCTGAAAAAGCATCCTTC +
Preference number: 4 (lower is better)
Translates to: PSATEDLSSRQPCKACCIGSCGD*SEKASF
Trigger: GAAGGATGCTTTTTCAGATCAGTCTCCACAGCTACC...GATGCAGCAAGCTTTGCAAGGCTGACGAGAGCTGAGATCTTCAGTGGCCGATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR TCA 90 bp CTCTCCTGGCTAAGCGGATTCAGCGCTGGCCAACAAACCCAGACAGGTACGGCCAATCTTTTGAACATGTaGATCGTTTCCACACACCCT +
Preference number: 4 (lower is better)
Translates to: LSWLSGFSAGQQTQTGTANLLNM*IVSTHP
Trigger: AGGGTGTGTGGAAACGATTCACATGTTCAAAAGATT...GGCCGTACCTGTCTGGGTTTGTTGGCCAGCGCTGAATCCGCTTAGCCAGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR TCA 90 bp AGACGTTTGGGAACTGTTGGAGACACACACACATTCTCAGCCCATCACTCCGCCTTAACTGAAAGTTGCTaGAGACAGGCTCCTGTCGGC +
Preference number: 4 (lower is better)
Translates to: RRLGTVGDTHTFSAHHSALTESC*RQAPVG
Trigger: GCCGACAGGAGCCTGTCTTCAGCAACTTTCAGTTAA...GGCGGAGTGATGGGCTGAGAATGTGTGTGTGTCTCCAACAGTTCCCAAACGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR GCA 90 bp AAATGTCTTTCAAGTTCCCAGAGAACTAACTCTAAGCCCATCTCACATTTGTCTCGCCATGCGGGACCCTaGCGCGGACCTCAGACCACG +
Preference number: 4 (lower is better)
Translates to: KCLSSSQRTNSKPISHLSRHAGP*RGPQTT
Trigger: CGTGGTCTGAGGTCCGCGGCAGGGTCCCGCATGGCG...AGACAAATGTGAGATGGGCTTAGAGTTAGTTCTCTGGGAACTTGAAAGACATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262109.8
CDS-3UTR GCA 90 bp ATATGGCATAAATGTCTTTCAAGTTCCCAGAGAACTAACTCTAAGCCCATCTCACGGGGCTCCCACAGCTaGTGGGCTCCGGCCAACAGG +
Preference number: 4 (lower is better)
Translates to: IWHKCLSSSQRTNSKPISRGSHS*WAPANR
Trigger: CCTGTTGGCCGGAGCCCAGCAGCTGTGGGAGCCCCG...TGAGATGGGCTTAGAGTTAGTTCTCTGGGAACTTGAAAGACATTTATGCCATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262109.8
CDS-3UTR GCA 90 bp TCAGCTCTCGTCAGCCTTGCAAAGCTTGCTGCATCTGAGTCTTGGGCTCCCGGTAATCTCTCAGTATCTTaGAGGAGCAGCAGCGTTTTC +
Preference number: 4 (lower is better)
Translates to: SALVSLAKLAASESWAPGNLSVS*RSSSVF
Trigger: GAAAACGCTGCTGCTCCTGCAAGATACTGAGAGATT...ACCGGGAGCCCAAGACTCAGATGCAGCAAGCTTTGCAAGGCTGACGAGAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR GCA 90 bp CTCTCCTCCCTGCACTCCGGGCCTTATGGCCCTCTTGAGCCTCAGCTGGAACCTAACATTTCCAGAGCATaGTTCAATCTCTCAGTATCT +
Preference number: 4 (lower is better)
Translates to: LSSLHSGPYGPLEPQLEPNISRA*FNLSVS
Trigger: AGATACTGAGAGATTGAAGCATGCTCTGGAAATGTT...AGGTTCCAGCTGAGGCTCAAGAGGGCCATAAGGCCCGGAGTGCAGGGAGGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR GCA 90 bp ATCAATTCATTCTTTATTCAACATACACTTGTTGATGCCCGGCTCTGTGCCCGAAGGGCCAGGCTTCCGTaGTCTGGGCTCCAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: INSFFIQHTLVDARLCARRARLP*SGLQQD
Trigger: GTCCTGCTGGAGCCCAGAGCACGGAAGCCTGGCCCT...TCGGGCACAGAGCCGGGCATCAACAAGTGTATGTTGAATAAAGAATGAATTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR GCA 90 bp GTCCACCTGGACGTTGGCTACAGCTGCCTAACCTGTGGCTGCACCTTGGTCCACTCCGGAAACTTAGACTaGACATGCATTTCTGCATAT +
Preference number: 4 (lower is better)
Translates to: VHLDVGYSCLTCGCTLVHSGNLD*TCISAY
Trigger: ATATGCAGAAATGCATGTGCAGTCTAAGTTTCCGGA...GTGGACCAAGGTGCAGCCACAGGTTAGGCAGCTGTAGCCAACGTCCAGGTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR GCA 90 bp GGAGGTAAGCAAAAATTTACCATCTACCACAGCAGTAGAGGAGAAGGAAAAGAGGGTGCCACTGACGGGTaGCACGGACCCTCCTCCACT +
Preference number: 4 (lower is better)
Translates to: GGKQKFTIYHSSRGEGKEGATDG*HGPSST
Trigger: AGTGGAGGAGGGTCCGTGGCACCCGTCAGTGGCACC...CTCTTTTCCTTCTCCTCTACTGCTGTGGTAGATGGTAAATTTTTGCTTACCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR GCA 90 bp ATTTTTATATCAAGCAGAGATGCAGGAAGCCTGTTTCTCTCTGGGACTCTATTCCAGCCCCCGGCTCCCTaGACCAGTGCCACGGCATCA +
Preference number: 4 (lower is better)
Translates to: IFISSRDAGSLFLSGTLFQPPAP*TSATAS
Trigger: TGATGCCGTGGCACTGGTGCAGGGAGCCGGGGGCTG...GAATAGAGTCCCAGAGAGAAACAGGCTTCCTGCATCTCTGCTTGATATAAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR GCA 90 bp CAGGTGGAAGTTGGATGGGAACAACCCACCCAGCCAATTAGGTTCCTCAGTTGCAAAGGACTTGGGCACTaGCTCATTCAAGCCACCTTG +
Preference number: 4 (lower is better)
Translates to: QVEVGWEQPTQPIRFLSCKGLGH*LIQATL
Trigger: CAAGGTGGCTTGAATGAGGCAGTGCCCAAGTCCTTT...GCAACTGAGGAACCTAATTGGCTGGGTGGGTTGTTCCCATCCAACTTCCACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR GCA 90 bp TATGAACTATCCCTGATCTGCCCAGGGGAGGCGTGTCTGACCCTTCACCATTGGATGACACCAAGGAGCTaGTGTCTGGGAAATGCACTT +
Preference number: 4 (lower is better)
Translates to: YELSLICPGEACLTLHHWMTPRS*CLGNAL
Trigger: AAGTGCATTTCCCAGACAGCAGCTCCTTGGTGTCAT...CCAATGGTGAAGGGTCAGACACGCCTCCCCTGGGCAGATCAGGGATAGTTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR GCA 90 bp CGGCCACTGAAGATCTCAGCTCTCGTCAGCCTTGCAAAGCTTGCTGCATCTGAGATTAGGTTCCTCAGTTaGATGACACCAAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: RPLKISALVSLAKLAASEIRFLS*MTPRSC
Trigger: GCAGCTCCTTGGTGTCATGCAACTGAGGAACCTAAT...CTCAGATGCAGCAAGCTTTGCAAGGCTGACGAGAGCTGAGATCTTCAGTGGCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR GCA 90 bp CCAGCAGCCCTGTACCCATCGGCCACTGAAGATCTCAGCTCTCGTCAGCCTTGCGTCCTGTCTCTCAGTTaGAGAGTGAAGATTTTGTTT +
Preference number: 4 (lower is better)
Translates to: PAALYPSATEDLSSRQPCVLSLS*RVKILF
Trigger: AAACAAAATCTTCACTCTGCAACTGAGAGACAGGAC...GCAAGGCTGACGAGAGCTGAGATCTTCAGTGGCCGATGGGTACAGGGCTGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR GCA 90 bp CCCAGGGGAGGCGTGTCTGACCCTTCACCATTGGAAATCAACTTAATGGACTGTGTACGGCCAGAGCACTaGTCCCAGGAATTTGGAGTT +
Preference number: 4 (lower is better)
Translates to: PRGGVSDPSPLEINLMDCVRPEH*SQEFGV
Trigger: AACTCCAAATTCCTGGGAGCAGTGCTCTGGCCGTAC...ACAGTCCATTAAGTTGATTTCCAATGGTGAAGGGTCAGACACGCCTCCCCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CCA 90 bp TGGGCGGCCGCCGTCCAGAGAGAAACTCCTGCCACGTGTGTGAGGCTGACCGAATTCTTCCAAGGTTTGTaGCAGAAATCCCATTTAATA +
Preference number: 4 (lower is better)
Translates to: WAAAVQRETPATCVRLTEFFQGL*QKSHLI
Trigger: TATTAAATGGGATTTCTGCCACAAACCTTGGAAGAA...TTCGGTCAGCCTCACACACGTGGCAGGAGTTTCTCTCTGGACGGCGGCCGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CCA 90 bp TCCATGCTGCAAGTACCTCTTGGCAAATCCTCAGCCACCCCCACCTGGTCCACGTCATTGCTGTTTTGGTaGCGTGTAAGTCTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: SMLQVPLGKSSATPTWSTSLLFW*RVSLSE
Trigger: CTCTGAAAGACTTACACGCCACCAAAACAGCAATGA...CGTGGACCAGGTGGGGGTGGCTGAGGATTTGCCAAGAGGTACTTGCAGCATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CCA 90 bp TCTTGGGCTCCCGGTCCACTGCTTAAAAAGTTACTATCACACAAAGTCGAAAGTCCAGCTGGGACCCTCTaGAACCCCAACCCGAGCTGT +
Preference number: 4 (lower is better)
Translates to: SWAPGPLLKKLLSHKVESPAGTL*NPNPSC
Trigger: ACAGCTCGGGTTGGGGTTCCAGAGGGTCCCAGCTGG...ACTTTCGACTTTGTGTGATAGTAACTTTTTAAGCAGTGGACCGGGAGCCCAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CCA 90 bp GCACTGCCTCATTCAAGCCACCTTGGAGCAGACGTGGCTACGCTCCCAGCAGCCAACATTCTTATTGCTTaGAGGTTTACTCGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: ALPHSSHLGADVATLPAANILIA*RFTRVR
Trigger: TCTCACTCGAGTAAACCTCCAAGCAATAAGAATGTT...GGCTGCTGGGAGCGTAGCCACGTCTGCTCCAAGGTGGCTTGAATGAGGCAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR TCA 90 bp GGCATAAATGTCTTTCAAGTTCCCAGAGAACTAACTCTAAGCCCATCTCACATTGGGCAGCATGCTGTGTaGCGCAAGGCGGTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: GINVFQVPRELTLSPSHIGQHAV*RKAVQQ
Trigger: CTGCTGGACCGCCTTGCGTCACACAGCATGCTGCCC...AATGTGAGATGGGCTTAGAGTTAGTTCTCTGGGAACTTGAAAGACATTTATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262109.8
CDS-3UTR TCA 90 bp TCTGAGTCTTGGGCTCCCGGTCCACTGCTTAAAAAGTTACTATCACACAAAGTCGGGACAAACTGTGACTaGGCCACAGGCTCACCTCAG +
Preference number: 4 (lower is better)
Translates to: SESWAPGPLLKKLLSHKVGTNCD*ATGSPQ
Trigger: CTGAGGTGAGCCTGTGGCTCAGTCACAGTTTGTCCC...GACTTTGTGTGATAGTAACTTTTTAAGCAGTGGACCGGGAGCCCAAGACTCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR TCA 90 bp TTGATGCCCGGCTCTGTGCCCGACAAGATGGTAGCTGTGGAGACTGATCTGAAAGGTAGCTGTGGAGACTaGTCTGAAAAAGCATCCTTC +
Preference number: 4 (lower is better)
Translates to: LMPGSVPDKMVAVETDLKGSCGD*SEKASF
Trigger: GAAGGATGCTTTTTCAGATCAGTCTCCACAGCTACC...TTTCAGATCAGTCTCCACAGCTACCATCTTGTCGGGCACAGAGCCGGGCATCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR TCA 90 bp AGTCTTGGGCTCCCGGTCCACTGCTTAAAAAGTTACTATCACACAAAGTCGAAAGAGGCCTGGGTGCACTaGCACCATTCCTGCAAAGGG +
Preference number: 4 (lower is better)
Translates to: SLGLPVHCLKSYYHTKSKEAWVH*HHSCKG
Trigger: CCCTTTGCAGGAATGGTGTCAGTGCACCCAGGCCTC...TTTCGACTTTGTGTGATAGTAACTTTTTAAGCAGTGGACCGGGAGCCCAAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR GCA 90 bp CTGAGTCTTGGGCTCCCGGTCCACTGCTTAAAAAGTTACTATCACACAAAGTCGACCAGCAGCCTTTGCTaGCAAGCCGGCTGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: LSLGLPVHCLKSYYHTKSTSSLC*QAGCFL
Trigger: AAGAAAGCAGCCGGCTTGGCAGCAAAGGCTGCTGGT...CGACTTTGTGTGATAGTAACTTTTTAAGCAGTGGACCGGGAGCCCAAGACTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522706.5
CDS-3UTR GCA 90 bp TCCCAAACACATGGGTTCACCCATCTCAGCGCATGCGCACTTGGCTGCAACAACTACCAGGAGGCATCGTaGAATGTTCTGGGAACATTT +
Preference number: 4 (lower is better)
Translates to: SQTHGFTHLSACALGCNNYQEAS*NVLGTF
Trigger: AAATGTTCCCAGAACATTGCACGATGCCTCCTGGTA...GTTGTTGCAGCCAAGTGCGCATGCGCTGAGATGGGTGAACCCATGTGTTTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR GCA 90 bp GGATTCAGCGCTGGCCAACAAACCCAGACAGGTACGGCCAGAGCACTGCTCCCAAGACAACATTCTTATTaGTTGGAGGTTTACTCGAGT +
Preference number: 4 (lower is better)
Translates to: GFSAGQQTQTGTARALLPRQHSY*LEVYSS
Trigger: ACTCGAGTAAACCTCCAAGCAATAAGAATGTTGTCT...TGGGAGCAGTGCTCTGGCCGTACCTGTCTGGGTTTGTTGGCCAGCGCTGAATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CCA 90 bp CTTTCAAGTTCCCAGAGAACTAACTCTAAGCCCATCTCACATTTGTCTTTTAAGCCTCAGGAGGCCCGCTaGCAGTGTAGAGCCGTCGGG +
Preference number: 4 (lower is better)
Translates to: LSSSQRTNSKPISHLSFKPQEAR*QCRAVG
Trigger: CCCGACGGCTCTACACTGCCAGCGGGCCTCCTGAGG...CTTAAAAGACAAATGTGAGATGGGCTTAGAGTTAGTTCTCTGGGAACTTGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262109.8
CDS-3UTR CCA 90 bp AATGTCTTTCAAGTTCCCAGAGAACTAACTCTAAGCCCATCTCACATTTGTCTTGGCTCCCACAGCTGCTaGGCTCCGGCCAACAGGGGA +
Preference number: 4 (lower is better)
Translates to: NVFQVPRELTLSPSHICLGSHSC*APANRG
Trigger: TCCCCTGTTGGCCGGAGCCCAGCAGCTGTGGGAGCC...AAGACAAATGTGAGATGGGCTTAGAGTTAGTTCTCTGGGAACTTGAAAGACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262109.8
CDS-3UTR CCA 90 bp TCTGAGTCTTGGGCTCCCGGTCCACTGCTTAAAAAGTTACTATCACACAAAGTCGCTGCATCTGAGTCTTaGGCTCCCGGTCCACTGCTT +
Preference number: 4 (lower is better)
Translates to: SESWAPGPLLKKLLSHKVAASES*APGPLL
Trigger: AAGCAGTGGACCGGGAGCCCAAGACTCAGATGCAGC...GACTTTGTGTGATAGTAACTTTTTAAGCAGTGGACCGGGAGCCCAAGACTCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR CCA 90 bp AGACGTTTGGGAACTGTTGGAGACACACACACATTCTCAGCCCATCACTCCGCCTTTGGAGTTGATACCTaGGGACCACAACACGCACAT +
Preference number: 4 (lower is better)
Translates to: RRLGTVGDTHTFSAHHSAFGVDT*GPQHAH
Trigger: ATGTGCGTGTTGTGGTCCCCAGGTATCAACTCCAAA...GGCGGAGTGATGGGCTGAGAATGTGTGTGTGTCTCCAACAGTTCCCAAACGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR TCA 90 bp AAGTTACTATCACACAAAGTCGAAAGTAGACAGTTCCTCTTGACCTGGAATTGTGGGCAGCATGCTGTGTaGCGCAAGGCGGTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: KLLSHKVESRQFLLTWNCGQHAV*RKAVQQ
Trigger: CTGCTGGACCGCCTTGCGTCACACAGCATGCTGCCC...ACAATTCCAGGTCAAGAGGAACTGTCTACTTTCGACTTTGTGTGATAGTAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR TCA 90 bp TCTTGGGCTCCCGGTCCACTGCTTAAAAAGTTACTATCACACAAAGTCGAAAGTAAAGCTTGCTGCATCTaGGTCTTGGGCTCCCGGTCC +
Preference number: 4 (lower is better)
Translates to: SWAPGPLLKKLLSHKVESKACCI*VLGSRS
Trigger: GGACCGGGAGCCCAAGACTCAGATGCAGCAAGCTTT...ACTTTCGACTTTGTGTGATAGTAACTTTTTAAGCAGTGGACCGGGAGCCCAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR TCA 90 bp TTGCAAAGCTTGCTGCATCTGAGTCTTGGGCTCCCGGTCCACTGCTTAAAAAGTCTCAGAGCCAACTATTaGGGACCTGGGAACTTATGG +
Preference number: 4 (lower is better)
Translates to: LQSLLHLSLGLPVHCLKSLRANY*GPGNLW
Trigger: CCATAAGTTCCCAGGTCCTCAATAGTTGGCTCTGAG...ACTTTTTAAGCAGTGGACCGGGAGCCCAAGACTCAGATGCAGCAAGCTTTGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR GCA 90 bp TTGCAAAGCTTGCTGCATCTGAGTCTTGGGCTCCCGGTCCACTGCTTAAAAAGTAAAGGACTTGGGCACTaGCTCATTCAAGCCACCTTG +
Preference number: 4 (lower is better)
Translates to: LQSLLHLSLGLPVHCLKSKGLGH*LIQATL
Trigger: CAAGGTGGCTTGAATGAGGCAGTGCCCAAGTCCTTT...ACTTTTTAAGCAGTGGACCGGGAGCCCAAGACTCAGATGCAGCAAGCTTTGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR GCA 90 bp CTGAAGATCTCAGCTCTCGTCAGCCTTGCAAAGCTTGCTGCATCTGAGTCTTGGATTAGGTTCCTCAGTTaGATGACACCAAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: LKISALVSLAKLAASESWIRFLS*MTPRSC
Trigger: GCAGCTCCTTGGTGTCATGCAACTGAGGAACCTAAT...CCAAGACTCAGATGCAGCAAGCTTTGCAAGGCTGACGAGAGCTGAGATCTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR GCA 90 bp TCATTCTTTATTCAACATACACTTGTTGATGCCCGGCTCTGTGCCCGACAAGATGGTGCCCAGTGCACCTaGTGCAGGTACAAAGGTGAG +
Preference number: 4 (lower is better)
Translates to: SFFIQHTLVDARLCARQDGAQCT*CRYKGE
Trigger: CTCACCTTTGTACCTGCAGCAGGTGCACTGGGCACC...ATCTTGTCGGGCACAGAGCCGGGCATCAACAAGTGTATGTTGAATAAAGAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR GCA 90 bp CCAAGGAGCTGCTGTCTGGGAAATGCACTTATTAGGAGAGGGACAAACTGTGACTACGGAGGTGATGGCTaGAGCTGCAGACAGCTATTT +
Preference number: 4 (lower is better)
Translates to: PRSCCLGNALIRRGTNCDYGGDG*SCRQLF
Trigger: AAATAGCTGTCTGCAGCTGCAGCCATCACCTCCGTA...GTCACAGTTTGTCCCTCTCCTAATAAGTGCATTTCCCAGACAGCAGCTCCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CCA 90 bp CATAAATGTCTTTCAAGTTCCCAGAGAACTAACTCTAAGCCCATCTCACATTTGCTGTGTCATCCCCGCTaGAGGCGTTCTCGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: HKCLSSSQRTNSKPISHLLCHPR*RRSRGS
Trigger: GGAGCCCCGAGAACGCCTCCAGCGGGGATGACACAG...CAAATGTGAGATGGGCTTAGAGTTAGTTCTCTGGGAACTTGAAAGACATTTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262109.8
CDS-3UTR CCA 90 bp CTGAAGATCTCAGCTCTCGTCAGCCTTGCAAAGCTTGCTGCATCTGAGTCTTGGCAAGGTCATGGATATTaGGAAGACAGACAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LKISALVSLAKLAASESWQGHGY*EDRQQQ
Trigger: CTGCTGCTGTCTGTCTTCCCAATATCCATGACCTTG...CCAAGACTCAGATGCAGCAAGCTTTGCAAGGCTGACGAGAGCTGAGATCTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR TCA 90 bp CCCAGGGGAGGCGTGTCTGACCCTTCACCATTGGAAATCAACTTAATGGACTGTTGGGCTAAGATGATGTaGTTCTTCCAAGGTTTGTGG +
Preference number: 4 (lower is better)
Translates to: PRGGVSDPSPLEINLMDCWAKMM*FFQGLW
Trigger: CCACAAACCTTGGAAGAATCACATCATCTTAGCCCA...ACAGTCCATTAAGTTGATTTCCAATGGTGAAGGGTCAGACACGCCTCCCCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR TCA 90 bp TGGGAAATGCACTTATTAGGAGAGGGACAAACTGTGACTGAGCCACAGGCTCACTCTGGGAACTGGAGCTaGAAAACAGATCAAGTCAGG +
Preference number: 4 (lower is better)
Translates to: WEMHLLGEGQTVTEPQAHSGNWS*KTDQVR
Trigger: CCTGACTTGATCTGTTTTTCAGCTCCAGTTCCCAGA...GTGAGCCTGTGGCTCAGTCACAGTTTGTCCCTCTCCTAATAAGTGCATTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR TCA 90 bp TCCCAAACACATGGGTTCACCCATCTCAGCGCATGCGCACTTGGCTGCAACAACAACAGCCTGAATTTCTaGTTTTCAGCATTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: SQTHGFTHLSACALGCNNNSLNF*FSAFAG
Trigger: ACCTGCAAATGCTGAAAATCAGAAATTCAGGCTGTT...GTTGTTGCAGCCAAGTGCGCATGCGCTGAGATGGGTGAACCCATGTGTTTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR TCA 90 bp GAAGTTGGATGGGAACAACCCACCCAGCCAATTAGGTTCCTCAGTTGCATGACAGTAGACAGTTCCTCTTaGCCTGGAATTGTCCAAGTC +
Preference number: 4 (lower is better)
Translates to: EVGWEQPTQPIRFLSCMTVDSSS*PGIVQV
Trigger: GACTTGGACAATTCCAGGTCAAGAGGAACTGTCTAC...TGTCATGCAACTGAGGAACCTAATTGGCTGGGTGGGTTGTTCCCATCCAACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR TCA 90 bp ATCAATTCATTCTTTATTCAACATACACTTGTTGATGCCCGGCTCTGTGCCCGAGGGACAAACTGTGACTaGGCCACAGGCTCACCTCAG +
Preference number: 4 (lower is better)
Translates to: INSFFIQHTLVDARLCARGTNCD*ATGSPQ
Trigger: CTGAGGTGAGCCTGTGGCTCAGTCACAGTTTGTCCC...TCGGGCACAGAGCCGGGCATCAACAAGTGTATGTTGAATAAAGAATGAATTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR TCA 90 bp ATACGCTGTGGTCTCATGCAGCACAGAGAACCTAGGGAAATTATCCTAATTAATATGCCATCCTCATCCTaGGCCCCTGGACTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: IRCGLMQHREPREIILINMPSSS*APGLLS
Trigger: GGACAGGAGTCCAGGGGCTCAGGATGAGGATGGCAT...ATTAATTAGGATAATTTCCCTAGGTTCTCTGTGCTGCATGAGACCACAGCGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR TCA 90 bp CAACATACACTTGTTGATGCCCGGCTCTGTGCCCGACAAGATGGTAGCTGTGGATGTTCAAATGGTGTCTaGGGCACAGATCTTTGTAAC +
Preference number: 4 (lower is better)
Translates to: QHTLVDARLCARQDGSCGCSNGV*GTDLCN
Trigger: GTTACAAAGATCTGTGCCTCAGACACCATTTGAACA...TCCACAGCTACCATCTTGTCGGGCACAGAGCCGGGCATCAACAAGTGTATGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR GCA 90 bp AATGTCTTTCAAGTTCCCAGAGAACTAACTCTAAGCCCATCTCACATTTGTCTTAACACGTGCTTCCTGTaGGCCGCCATGCGGGACCCT +
Preference number: 4 (lower is better)
Translates to: NVFQVPRELTLSPSHICLNTCFL*AAMRDP
Trigger: AGGGTCCCGCATGGCGGCGCACAGGAAGCACGTGTT...AAGACAAATGTGAGATGGGCTTAGAGTTAGTTCTCTGGGAACTTGAAAGACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262109.8
CDS-3UTR GCA 90 bp CTGAAGATCTCAGCTCTCGTCAGCCTTGCAAAGCTTGCTGCATCTGAGTCTTGGTTTTGCTTATTGTGGTaGCATCTGTGTGCTGTCGCT +
Preference number: 4 (lower is better)
Translates to: LKISALVSLAKLAASESWFCLLW*HLCAVA
Trigger: AGCGACAGCACACAGATGGCACCACAATAAGCAAAA...CCAAGACTCAGATGCAGCAAGCTTTGCAAGGCTGACGAGAGCTGAGATCTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522706.5
CDS-3UTR GCA 90 bp CCCTCAGCAATGTGGTTTCTACGGACAGAAACCACTCCCGACACTTACTCTGAAAGACATGAGCACAGCTaGTCCAGCACACAACAGTTT +
Preference number: 4 (lower is better)
Translates to: PSAMWFLRTETTPDTYSERHEHS*SSTQQF
Trigger: AAACTGTTGTGTGCTGGAGCAGCTGTGCTCATGTCT...TTCAGAGTAAGTGTCGGGAGTGGTTTCTGTCCGTAGAAACCACATTGCTGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR GCA 90 bp TTGCAAAGCTTGCTGCATCTGAGTCTTGGGCTCCCGGTCCACTGCTTAAAAAGTGGGCTCCCGGTCCACTaGTTAAAAAGTTACTATCAC +
Preference number: 4 (lower is better)
Translates to: LQSLLHLSLGLPVHCLKSGLPVH*LKSYYH
Trigger: GTGATAGTAACTTTTTAAGCAGTGGACCGGGAGCCC...ACTTTTTAAGCAGTGGACCGGGAGCCCAAGACTCAGATGCAGCAAGCTTTGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR GCA 90 bp AGACAGTTCCTCTTGACCTGGAATTGTCCAAGTCAGCACCACAGCTGGTTAAGGCACCAGGAGGCATCGTaGAATGTTCTGGGAACATTT +
Preference number: 4 (lower is better)
Translates to: RQFLLTWNCPSQHHSWLRHQEAS*NVLGTF
Trigger: AAATGTTCCCAGAACATTGCACGATGCCTCCTGGTG...CCTTAACCAGCTGTGGTGCTGACTTGGACAATTCCAGGTCAAGAGGAACTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CCA 90 bp CCAAGGAGCTGCTGTCTGGGAAATGCACTTATTAGGAGAGGGACAAACTGTGACAGCAGCGTTTTCATGTaGTACAGGATGGACACGTCT +
Preference number: 4 (lower is better)
Translates to: PRSCCLGNALIRRGTNCDSSVFM*YRMDTS
Trigger: AGACGTGTCCATCCTGTACCACATGAAAACGCTGCT...GTCACAGTTTGTCCCTCTCCTAATAAGTGCATTTCCCAGACAGCAGCTCCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR CCA 90 bp AACCCCAACCTGGTCCATGCTGCAAGTACCTCTTGGCAAATCCTCAGCCACCCCAAACTTAGGAAAATTTaGCTCCAAGAGTTGACAGCT +
Preference number: 4 (lower is better)
Translates to: NPNLVHAASTSWQILSHPKLRKI*LQELTA
Trigger: AGCTGTCAACTCTTGGAGCCAAATTTTCCTAAGTTT...GGGGTGGCTGAGGATTTGCCAAGAGGTACTTGCAGCATGGACCAGGTTGGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CCA 90 bp AGTCTTGGGCTCCCGGTCCACTGCTTAAAAAGTTACTATCACACAAAGTCGAAAAGTCAGCACCACAGCTaGTTAAGGCAGCCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: SLGLPVHCLKSYYHTKSKSQHHS*LRQPLS
Trigger: AGAGAGGGGCTGCCTTAACCAGCTGTGGTGCTGACT...TTTCGACTTTGTGTGATAGTAACTTTTTAAGCAGTGGACCGGGAGCCCAAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR CCA 90 bp TGTAACGTTGCATTTTCACATTTGTGTGGCAGGACAAGCATGGGGCAAGAGGGAGAGACACTAATAACATaGTGCCCAGTGCACCTGCTG +
Preference number: 4 (lower is better)
Translates to: CNVAFSHLCGRTSMGQEGETLIT*CPVHLL
Trigger: CAGCAGGTGCACTGGGCACCATGTTATTAGTGTCTC...TCCCTCTTGCCCCATGCTTGTCCTGCCACACAAATGTGAAAATGCAACGTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CCA 90 bp CCAAGGAGCTGCTGTCTGGGAAATGCACTTATTAGGAGAGGGACAAACTGTGACTCCACACACCCTCCCTaGCCTTCTGTGTTGAATTTT +
Preference number: 4 (lower is better)
Translates to: PRSCCLGNALIRRGTNCDSTHPP*PSVLNF
Trigger: AAAATTCAACACAGAAGGCCAGGGAGGGTGTGTGGA...GTCACAGTTTGTCCCTCTCCTAATAAGTGCATTTCCCAGACAGCAGCTCCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CCA 90 bp CCATCGGCCACTGAAGATCTCAGCTCTCGTCAGCCTTGCAAAGCTTGCTGCATCATGTGTGCCGATTGCTaGGATAAAGAGATAACTAAG +
Preference number: 4 (lower is better)
Translates to: PSATEDLSSRQPCKACCIMCADC*DKEITK
Trigger: CTTAGTTATCTCTTTATCCCAGCAATCGGCACACAT...GATGCAGCAAGCTTTGCAAGGCTGACGAGAGCTGAGATCTTCAGTGGCCGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR TCA 90 bp CTCCCGGTCCACTGCTTAAAAAGTTACTATCACACAAAGTCGAAAGTAGACAGTGTACCCATCGGCCACTaGAGATCTCAGCTCTCGTCA +
Preference number: 4 (lower is better)
Translates to: LPVHCLKSYYHTKSKVDSVPIGH*RSQLSS
Trigger: TGACGAGAGCTGAGATCTTCAGTGGCCGATGGGTAC...ACTGTCTACTTTCGACTTTGTGTGATAGTAACTTTTTAAGCAGTGGACCGGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR TCA 90 bp ACACAGTTCCCTCCGAGAAGTGATGCTCTGCCGGGGAATAATTTTATTATGAATGGTTCCTCAGTTGCATaGCACCAAGGAGCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: TQFPPRSDALPGNNFIMNGSSVA*HQGAAV
Trigger: GACAGCAGCTCCTTGGTGTCATGCAACTGAGGAACC...ATTCATAATAAAATTATTCCCCGGCAGAGCATCACTTCTCGGAGGGAACTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR TCA 90 bp TTGTTGATGCCCGGCTCTGTGCCCGACAAGATGGTAGCTGTGGAGACTGATCTGAGATTGCCTTTTTCTTaGAAATGTAGACGTTTGGGA +
Preference number: 4 (lower is better)
Translates to: LLMPGSVPDKMVAVETDLRLPFS*KCRRLG
Trigger: TCCCAAACGTCTACATTTTCAAGAAAAAGGCAATCT...CAGATCAGTCTCCACAGCTACCATCTTGTCGGGCACAGAGCCGGGCATCAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR TCA 90 bp CCAAGGAGCTGCTGTCTGGGAAATGCACTTATTAGGAGAGGGACAAACTGTGACATTTGGCAAATGCTATaGACTATCCCTGATCTGCCC +
Preference number: 4 (lower is better)
Translates to: PRSCCLGNALIRRGTNCDIWQML*TIPDLP
Trigger: GGGCAGATCAGGGATAGTTCATAGCATTTGCCAAAT...GTCACAGTTTGTCCCTCTCCTAATAAGTGCATTTCCCAGACAGCAGCTCCTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR GCA 90 bp ATATGGCATAAATGTCTTTCAAGTTCCCAGAGAACTAACTCTAAGCCCATCTCACGCCTTCCCCTTCATTaGTGCTGTCCTCGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: IWHKCLSSSQRTNSKPISRLPLH*CCPRAG
Trigger: ACCAGCCCGAGGACAGCAGCAATGAAGGGGAAGGCG...TGAGATGGGCTTAGAGTTAGTTCTCTGGGAACTTGAAAGACATTTATGCCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262109.8
CDS-3UTR GCA 90 bp AAGTTACTATCACACAAAGTCGAAAGTAGACAGTTCCTCTTGACCTGGAATTGTCGCCTTCCCCTTCATTaGTGCTGTCCTCGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: KLLSHKVESRQFLLTWNCRLPLH*CCPRAG
Trigger: ACCAGCCCGAGGACAGCAGCAATGAAGGGGAAGGCG...ACAATTCCAGGTCAAGAGGAACTGTCTACTTTCGACTTTGTGTGATAGTAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522706.5
CDS-3UTR GCA 90 bp CATAAATGTCTTTCAAGTTCCCAGAGAACTAACTCTAAGCCCATCTCACATTTGCGTCTGAGGGCAGCATaGTGTGTGACGCAAGGCGGT +
Preference number: 4 (lower is better)
Translates to: HKCLSSSQRTNSKPISHLRLRAA*CVTQGG
Trigger: ACCGCCTTGCGTCACACAGCATGCTGCCCTCAGACG...CAAATGTGAGATGGGCTTAGAGTTAGTTCTCTGGGAACTTGAAAGACATTTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262109.8
CDS-3UTR GCA 90 bp ATTTTTATATCAAGCAGAGATGCAGGAAGCCTGTTTCTCTCTGGGACTCTATTCCCTCCAGCACCCATATaGTCTGCACGCTGTGACTCC +
Preference number: 4 (lower is better)
Translates to: IFISSRDAGSLFLSGTLFPPAPI*SARCDS
Trigger: GGAGTCACAGCGTGCAGAGCATATGGGTGCTGGAGG...GAATAGAGTCCCAGAGAGAAACAGGCTTCCTGCATCTCTGCTTGATATAAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR GCA 90 bp ATTTTTATATCAAGCAGAGATGCAGGAAGCCTGTTTCTCTCTGGGACTCTATTCCGGATGAGGGCGTTCTaGATGAAGGCAGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: IFISSRDAGSLFLSGTLFRMRAF*MKAAPP
Trigger: TGGAGGAGCTGCCTTCATGCAGAACGCCCTCATCCG...GAATAGAGTCCCAGAGAGAAACAGGCTTCCTGCATCTCTGCTTGATATAAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR GCA 90 bp GGAGGTAAGCAAAAATTTACCATCTACCACAGCAGTAGAGGAGAAGGAAAAGAGCCCCAACCTGGTCCATaGTGCAAGTACCTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: GGKQKFTIYHSSRGEGKEPQPGP*CKYLLA
Trigger: TGCCAAGAGGTACTTGCAGCATGGACCAGGTTGGGG...CTCTTTTCCTTCTCCTCTACTGCTGTGGTAGATGGTAAATTTTTGCTTACCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR GCA 90 bp ACCATTGGAAATCAACTTAATGGACTGTCCTGGAAAGGTAGTCAGTCTAGTCTAGCCCAGTGCACCTGCTaGAGGTACAAAGGTGAGCAC +
Preference number: 4 (lower is better)
Translates to: TIGNQLNGLSWKGSQSSLAQCTC*RYKGEH
Trigger: GTGCTCACCTTTGTACCTGCAGCAGGTGCACTGGGC...TAGACTAGACTGACTACCTTTCCAGGACAGTCCATTAAGTTGATTTCCAATGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CCA 90 bp AAATGTCTTTCAAGTTCCCAGAGAACTAACTCTAAGCCCATCTCACATTTGTCTTGGACGGCCAGCGTCTaGGGTTCCCTCTTTCCTTGG +
Preference number: 4 (lower is better)
Translates to: KCLSSSQRTNSKPISHLSWTASV*GSLFPW
Trigger: CCAAGGAAAGAGGGAACCCCAGACGCTGGCCGTCCA...AGACAAATGTGAGATGGGCTTAGAGTTAGTTCTCTGGGAACTTGAAAGACATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262109.8
CDS-3UTR CCA 90 bp CCACTGAAGATCTCAGCTCTCGTCAGCCTTGCAAAGCTTGCTGCATCTGAGTCTAATTCTTCTTCTCTTTaGCTGGTCATGAGGATCCTG +
Preference number: 4 (lower is better)
Translates to: PLKISALVSLAKLAASESNSSSL*LVMRIL
Trigger: CAGGATCCTCATGACCAGCCAAAGAGAAGAAGAATT...AGACTCAGATGCAGCAAGCTTTGCAAGGCTGACGAGAGCTGAGATCTTCAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522706.5
CDS-3UTR CCA 90 bp TCATTCTTTATTCAACATACACTTGTTGATGCCCGGCTCTGTGCCCGACAAGATCTGCTGTCCTCGGGCTaGTACATGAAACTGACACCA +
Preference number: 4 (lower is better)
Translates to: SFFIQHTLVDARLCARQDLLSSG*YMKLTP
Trigger: TGGTGTCAGTTTCATGTACCAGCCCGAGGACAGCAG...ATCTTGTCGGGCACAGAGCCGGGCATCAACAAGTGTATGTTGAATAAAGAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522706.5
CDS-3UTR CCA 90 bp CTGAAGATCTCAGCTCTCGTCAGCCTTGCAAAGCTTGCTGCATCTGAGTCTTGGCTGAAGCTGCATCTCTaGAGACACCGTCATAAAAAT +
Preference number: 4 (lower is better)
Translates to: LKISALVSLAKLAASESWLKLHL*RHRHKN
Trigger: ATTTTTATGACGGTGTCTCCAGAGATGCAGCTTCAG...CCAAGACTCAGATGCAGCAAGCTTTGCAAGGCTGACGAGAGCTGAGATCTTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR CCA 90 bp TCTTGGGCTCCCGGTCCACTGCTTAAAAAGTTACTATCACACAAAGTCGAAAGTTCATTCAAGCCACCTTaGAGCAGACGTGGCTACGCT +
Preference number: 4 (lower is better)
Translates to: SWAPGPLLKKLLSHKVESSFKPP*SRRGYA
Trigger: AGCGTAGCCACGTCTGCTCCAAGGTGGCTTGAATGA...ACTTTCGACTTTGTGTGATAGTAACTTTTTAAGCAGTGGACCGGGAGCCCAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR CCA 90 bp TGGGAAATGCACTTATTAGGAGAGGGACAAACTGTGACTGAGCCACAGGCTCACCAAGGAGCTGCTGTCTaGGAAATGCACTTATTAGGA +
Preference number: 4 (lower is better)
Translates to: WEMHLLGEGQTVTEPQAHQGAAV*EMHLLG
Trigger: TCCTAATAAGTGCATTTCCCAGACAGCAGCTCCTTG...GTGAGCCTGTGGCTCAGTCACAGTTTGTCCCTCTCCTAATAAGTGCATTTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR CCA 90 bp TCATTCTTTATTCAACATACACTTGTTGATGCCCGGCTCTGTGCCCGACAAGATAAGCACAGCTTGGCCTaGTACTCACCAAGCTCTCGT +
Preference number: 4 (lower is better)
Translates to: SFFIQHTLVDARLCARQDKHSLA*YSPSSR
Trigger: ACGAGAGCTTGGTGAGTACCAGGCCAAGCTGTGCTT...ATCTTGTCGGGCACAGAGCCGGGCATCAACAAGTGTATGTTGAATAAAGAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CCA 90 bp ATACGCTGTGGTCTCATGCAGCACAGAGAACCTAGGGAAATTATCCTAATTAATAGAGGGTGTTCCAGCTaGCGTCTGTCTCTCATCGCG +
Preference number: 4 (lower is better)
Translates to: IRCGLMQHREPREIILINRGCSS*RLSLIA
Trigger: CGCGATGAGAGACAGACGCCAGCTGGAACACCCTCT...ATTAATTAGGATAATTTCCCTAGGTTCTCTGTGCTGCATGAGACCACAGCGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR TCA 90 bp CATAAATGTCTTTCAAGTTCCCAGAGAACTAACTCTAAGCCCATCTCACATTTGATCTGCGAGGGCAGCTaGAGCTGCATCTCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: HKCLSSSQRTNSKPISHLICEGS*SCISGD
Trigger: GTCTCCAGAGATGCAGCTTCAGCTGCCCTCGCAGAT...CAAATGTGAGATGGGCTTAGAGTTAGTTCTCTGGGAACTTGAAAGACATTTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262109.8
CDS-3UTR GCA 90 bp GGCATAAATGTCTTTCAAGTTCCCAGAGAACTAACTCTAAGCCCATCTCACATTACCAGCAGCCTTTGCTaGCAAGCCGGCTGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: GINVFQVPRELTLSPSHITSSLC*QAGCFL
Trigger: AAGAAAGCAGCCGGCTTGGCAGCAAAGGCTGCTGGT...AATGTGAGATGGGCTTAGAGTTAGTTCTCTGGGAACTTGAAAGACATTTATGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262109.8
CDS-3UTR GCA 90 bp AATGTCTTTCAAGTTCCCAGAGAACTAACTCTAAGCCCATCTCACATTTGTCTTGACACCAGCAGCCTTTaGTGCCAAGCCGGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: NVFQVPRELTLSPSHICLDTSSL*CQAGCF
Trigger: AAAGCAGCCGGCTTGGCAGCAAAGGCTGCTGGTGTC...AAGACAAATGTGAGATGGGCTTAGAGTTAGTTCTCTGGGAACTTGAAAGACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262109.8
CDS-3UTR GCA 90 bp GGCATAAATGTCTTTCAAGTTCCCAGAGAACTAACTCTAAGCCCATCTCACATTCTTCCCCTTCATTGCTaGTGTCCTCGGGCTGGTACA +
Preference number: 4 (lower is better)
Translates to: GINVFQVPRELTLSPSHILPLHC*CPRAGT
Trigger: TGTACCAGCCCGAGGACAGCAGCAATGAAGGGGAAG...AATGTGAGATGGGCTTAGAGTTAGTTCTCTGGGAACTTGAAAGACATTTATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262109.8
CDS-3UTR GCA 90 bp TCTGAGTCTTGGGCTCCCGGTCCACTGCTTAAAAAGTTACTATCACACAAAGTCATGACACCAAGGAGCTaGTGTCTGGGAAATGCACTT +
Preference number: 4 (lower is better)
Translates to: SESWAPGPLLKKLLSHKVMTPRS*CLGNAL
Trigger: AAGTGCATTTCCCAGACAGCAGCTCCTTGGTGTCAT...GACTTTGTGTGATAGTAACTTTTTAAGCAGTGGACCGGGAGCCCAAGACTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR GCA 90 bp AGTCTTGGGCTCCCGGTCCACTGCTTAAAAAGTTACTATCACACAAAGTCGAAAGGAGAGCTAAGGAAATaGTGGCGGTTGGAACCTGTT +
Preference number: 4 (lower is better)
Translates to: SLGLPVHCLKSYYHTKSKGELRK*WRLEPV
Trigger: AACAGGTTCCAACCGCCAGCATTTCCTTAGCTCTCC...TTTCGACTTTGTGTGATAGTAACTTTTTAAGCAGTGGACCGGGAGCCCAAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR GCA 90 bp TCATTCTTTATTCAACATACACTTGTTGATGCCCGGCTCTGTGCCCGACAAGATACACTAATAACATGGTaGCCAGTGCACCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: SFFIQHTLVDARLCARQDTLITW*PVHLLQ
Trigger: CTGCAGCAGGTGCACTGGGCACCATGTTATTAGTGT...ATCTTGTCGGGCACAGAGCCGGGCATCAACAAGTGTATGTTGAATAAAGAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR GCA 90 bp TGGGAAATGCACTTATTAGGAGAGGGACAAACTGTGACTGAGCCACAGGCTCACTCAGGGAAAGGAAGCTaGATATTTCGTGGCTGTTTT +
Preference number: 4 (lower is better)
Translates to: WEMHLLGEGQTVTEPQAHSGKGS*IFRGCF
Trigger: AAAACAGCCACGAAATATGCAGCTTCCTTTCCCTGA...GTGAGCCTGTGGCTCAGTCACAGTTTGTCCCTCTCCTAATAAGTGCATTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR GCA 90 bp TCTGAGTCTTGGGCTCCCGGTCCACTGCTTAAAAAGTTACTATCACACAAAGTCCCATGCCCAGCAATGTaGAAGAGAAGAAAGTCCGTT +
Preference number: 4 (lower is better)
Translates to: SESWAPGPLLKKLLSHKVPCPAM*KRRKSV
Trigger: AACGGACTTTCTTCTCTTGCACATTGCTGGGCATGG...GACTTTGTGTGATAGTAACTTTTTAAGCAGTGGACCGGGAGCCCAAGACTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CCA 90 bp GCTGCTGTCTGGGAAATGCACTTATTAGGAGAGGGACAAACTGTGACTGAGCCACATCAGTCAAGGTCATaGATATTGGGAAGACAGACA +
Preference number: 4 (lower is better)
Translates to: AAVWEMHLLGEGQTVTEPHQSRS*ILGRQT
Trigger: TGTCTGTCTTCCCAATATCCATGACCTTGACTGATG...TGGCTCAGTCACAGTTTGTCCCTCTCCTAATAAGTGCATTTCCCAGACAGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CCA 90 bp ATTTTTATATCAAGCAGAGATGCAGGAAGCCTGTTTCTCTCTGGGACTCTATTCCTGCTCTGCACTCAGTaGTGTGCAGGTGAATGGCTC +
Preference number: 4 (lower is better)
Translates to: IFISSRDAGSLFLSGTLFLLCTQ*CAGEWL
Trigger: GAGCCATTCACCTGCACACCACTGAGTGCAGAGCAG...GAATAGAGTCCCAGAGAGAAACAGGCTTCCTGCATCTCTGCTTGATATAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CCA 90 bp AGACAGTTCCTCTTGACCTGGAATTGTCCAAGTCAGCACCACAGCTGGTTAAGGTTCTCTGTGTTCAAATaGTGTCTGAGGCACAGATCT +
Preference number: 4 (lower is better)
Translates to: RQFLLTWNCPSQHHSWLRFSVFK*CLRHRS
Trigger: AGATCTGTGCCTCAGACACCATTTGAACACAGAGAA...CCTTAACCAGCTGTGGTGCTGACTTGGACAATTCCAGGTCAAGAGGAACTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR CAA 72 bp AACTGTTTGCTACCTGGCTTCTCTAACATGCTGGTCTaGACCCCTCAGCAATGTGGTTTCTACGGACAGAAA +
Preference number: 4 (lower is better)
Translates to: NCLLPGFSNMLV*TPQQCGFYGQK
Trigger: TTTCTGTCCGTAGAAACCACATTGCTGAGGGGTCAAGACCAGCATGTTAGAGAAGCCAGGTAGCAAACAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR TCA 90 bp AGTCTTGGGCTCCCGGTCCACTGCTTAAAAAGTTACTATCACACAAAGTCGAAACTGTGGAGACTGATCTaGAAAAGCATCCTTCGTGAC +
Preference number: 4 (lower is better)
Translates to: SLGLPVHCLKSYYHTKSKLWRLI*KSILRD
Trigger: GTCACGAAGGATGCTTTTTCAGATCAGTCTCCACAG...TTTCGACTTTGTGTGATAGTAACTTTTTAAGCAGTGGACCGGGAGCCCAAGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR GCA 90 bp TTCTATCAGTGGCTTAACATAAATGTCTGTGTACACAAAACCTGTCTGATGATTCTTCTCTGGGACGGGTaGCACGGACCCACCTTCACT +
Preference number: 4 (lower is better)
Translates to: FYQWLNINVCVHKTCLMILLWDG*HGPTFT
Trigger: AGTGAAGGTGGGTCCGTGGCACCCGTCCCAGAGAAG...AATCATCAGACAGGTTTTGTGTACACAGACATTTATGTTAAGCCACTGATAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR GCA 90 bp ATACGCTGTGGTCTCATGCAGCACAGAGAACCTAGGGAAATTATCCTAATTAATTACGCTGTGGTCTCATaGAGCACAGAGAACCTAGGG +
Preference number: 4 (lower is better)
Translates to: IRCGLMQHREPREIILINYAVVS*STENLG
Trigger: CCCTAGGTTCTCTGTGCTGCATGAGACCACAGCGTA...ATTAATTAGGATAATTTCCCTAGGTTCTCTGTGCTGCATGAGACCACAGCGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CCA 90 bp GGCATAAATGTCTTTCAAGTTCCCAGAGAACTAACTCTAAGCCCATCTCACATTGGTTCCCTCTTTCCTTaGCCACTTGGAACAGGAGGA +
Preference number: 4 (lower is better)
Translates to: GINVFQVPRELTLSPSHIGSLFP*PLGTGG
Trigger: TCCTCCTGTTCCAAGTGGCCAAGGAAAGAGGGAACC...AATGTGAGATGGGCTTAGAGTTAGTTCTCTGGGAACTTGAAAGACATTTATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262109.8
CDS-3UTR CCA 90 bp GGCATAAATGTCTTTCAAGTTCCCAGAGAACTAACTCTAAGCCCATCTCACATTTTCTTTGGTGGATTTTaGACGGCCAGCGTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: GINVFQVPRELTLSPSHIFFGGF*TASVWG
Trigger: ACCCCAGACGCTGGCCGTCCAAAATCCACCAAAGAA...AATGTGAGATGGGCTTAGAGTTAGTTCTCTGGGAACTTGAAAGACATTTATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262109.8
CDS-3UTR CCA 90 bp GGCATAAATGTCTTTCAAGTTCCCAGAGAACTAACTCTAAGCCCATCTCACATTCTGCTGTCCTCGGGCTaGTACATGAAACTGACACCA +
Preference number: 4 (lower is better)
Translates to: GINVFQVPRELTLSPSHILLSSG*YMKLTP
Trigger: TGGTGTCAGTTTCATGTACCAGCCCGAGGACAGCAG...AATGTGAGATGGGCTTAGAGTTAGTTCTCTGGGAACTTGAAAGACATTTATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262109.8
CDS-3UTR CCA 90 bp ACCATTGGAAATCAACTTAATGGACTGTCCTGGAAAGGTAGTCAGTCTAGTCTATGTGACCTGTACCATTaGCCCAGGCTCTCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: TIGNQLNGLSWKGSQSSLCDLYH*PRLSEL
Trigger: AAGCTCAGAGAGCCTGGGCCAATGGTACAGGTCACA...TAGACTAGACTGACTACCTTTCCAGGACAGTCCATTAAGTTGATTTCCAATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CCA 90 bp TGTAACGTTGCATTTTCACATTTGTGTGGCAGGACAAGCATGGGGCAAGAGGGATCACTGCAGCAAGTATaGCTTAAACCTGCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: CNVAFSHLCGRTSMGQEGSLQQV*LKPASE
Trigger: TTCAGAAGCAGGTTTAAGCCATACTTGCTGCAGTGA...TCCCTCTTGCCCCATGCTTGTCCTGCCACACAAATGTGAAAATGCAACGTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CCA 90 bp ACCATTGGAAATCAACTTAATGGACTGTCCTGGAAAGGTAGTCAGTCTAGTCTATCATTCAAGCCACCTTaGAGCAGACGTGGCTACGCT +
Preference number: 4 (lower is better)
Translates to: TIGNQLNGLSWKGSQSSLSFKPP*SRRGYA
Trigger: AGCGTAGCCACGTCTGCTCCAAGGTGGCTTGAATGA...TAGACTAGACTGACTACCTTTCCAGGACAGTCCATTAAGTTGATTTCCAATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CCA 90 bp TCATTCTTTATTCAACATACACTTGTTGATGCCCGGCTCTGTGCCCGACAAGATATCCTTCGTGACAGGTaGAAGTTGGATGGGAACAAC +
Preference number: 4 (lower is better)
Translates to: SFFIQHTLVDARLCARQDILRDR*KLDGNN
Trigger: GTTGTTCCCATCCAACTTCCACCTGTCACGAAGGAT...ATCTTGTCGGGCACAGAGCCGGGCATCAACAAGTGTATGTTGAATAAAGAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR CCA 90 bp ACCATTGGAAATCAACTTAATGGACTGTCCTGGAAAGGTAGTCAGTCTAGTCTAGAGGAAAGCACAGCTTaGCCTGGTACTCACCAAGCT +
Preference number: 4 (lower is better)
Translates to: TIGNQLNGLSWKGSQSSLEESTA*PGTHQA
Trigger: AGCTTGGTGAGTACCAGGCCAAGCTGTGCTTTCCTC...TAGACTAGACTGACTACCTTTCCAGGACAGTCCATTAAGTTGATTTCCAATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
3UTR CAA 72 bp TGCCTTTTTCTTGAAAATGTAGACGTTTGGGAACTGTaGGAGACACACACACATTCTCAGCCCATCACTCCG +
Preference number: 4 (lower is better)
Translates to: CLFLENVDVWEL*ETHTHSQPITP
Trigger: CGGAGTGATGGGCTGAGAATGTGTGTGTGTCTCCAACAGTTCCCAAACGTCTACATTTTCAAGAAAAAGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR TCA 90 bp ATTTTTATATCAAGCAGAGATGCAGGAAGCCTGTTTCTCTCTGGGACTCTATTCCTATCTGCAGCTCTATaGCGCATCTCACCGAGTATC +
Preference number: 4 (lower is better)
Translates to: IFISSRDAGSLFLSGTLFLSAAL*RISPSI
Trigger: GATACTCGGTGAGATGCGTCATAGAGCTGCAGATAG...GAATAGAGTCCCAGAGAGAAACAGGCTTCCTGCATCTCTGCTTGATATAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR GCA 90 bp TCATTCTTTATTCAACATACACTTGTTGATGCCCGGCTCTGTGCCCGACAAGATAATCTCTCAGTATCTTaGAGGAGCAGCAGCGTTTTC +
Preference number: 4 (lower is better)
Translates to: SFFIQHTLVDARLCARQDNLSVS*RSSSVF
Trigger: GAAAACGCTGCTGCTCCTGCAAGATACTGAGAGATT...ATCTTGTCGGGCACAGAGCCGGGCATCAACAAGTGTATGTTGAATAAAGAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR GCA 90 bp CTTTCAAGTTCCCAGAGAACTAACTCTAAGCCCATCTCACATTTGTCTTTTAAGCCTCAGATGGCATCTTaGCCACCAGGAACAAACACG +
Preference number: 4 (lower is better)
Translates to: LSSSQRTNSKPISHLSFKPQMAS*PPGTNT
Trigger: CGTGTTTGTTCCTGGTGGGCAAGATGCCATCTGAGG...CTTAAAAGACAAATGTGAGATGGGCTTAGAGTTAGTTCTCTGGGAACTTGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262109.8
CDS-3UTR GCA 90 bp CTGAGTCTTGGGCTCCCGGTCCACTGCTTAAAAAGTTACTATCACACAAAGTCGCGAGAAGTGATGCTCTaGCGGGGAATAATTTTATTA +
Preference number: 4 (lower is better)
Translates to: LSLGLPVHCLKSYYHTKSREVML*RGIILL
Trigger: TAATAAAATTATTCCCCGGCAGAGCATCACTTCTCG...CGACTTTGTGTGATAGTAACTTTTTAAGCAGTGGACCGGGAGCCCAAGACTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR GCA 90 bp CTGAGTCTTGGGCTCCCGGTCCACTGCTTAAAAAGTTACTATCACACAAAGTCGCAGCTATTTGGCAAATaGTATGAACTATCCCTGATC +
Preference number: 4 (lower is better)
Translates to: LSLGLPVHCLKSYYHTKSQLFGK*YELSLI
Trigger: GATCAGGGATAGTTCATAGCATTTGCCAAATAGCTG...CGACTTTGTGTGATAGTAACTTTTTAAGCAGTGGACCGGGAGCCCAAGACTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CCA 90 bp GGCATAAATGTCTTTCAAGTTCCCAGAGAACTAACTCTAAGCCCATCTCACATTGGCTCAGCATGTTTCTaGCTCACTTTCTCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: GINVFQVPRELTLSPSHIGSACF*LTFSEV
Trigger: GACCTCTGAGAAAGTGAGCCAGAAACATGCTGAGCC...AATGTGAGATGGGCTTAGAGTTAGTTCTCTGGGAACTTGAAAGACATTTATGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262109.8
CDS-3UTR CCA 90 bp AAATGTCTTTCAAGTTCCCAGAGAACTAACTCTAAGCCCATCTCACATTTGTCTTCATGTGGTACAGGATaGACACGTCTGAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: KCLSSSQRTNSKPISHLSSCGTG*TRLRAA
Trigger: TGCTGCCCTCAGACGTGTCCATCCTGTACCACATGA...AGACAAATGTGAGATGGGCTTAGAGTTAGTTCTCTGGGAACTTGAAAGACATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262109.8
CDS-3UTR CCA 90 bp CATTCCTGCAAAGGGAAGGCTCAGACAATGGCAGTGTTGATTACGGAGGTGATGTCCCATTTAATAAACTaGTCCAGATTTCTTCATGCC +
Preference number: 4 (lower is better)
Translates to: HSCKGKAQTMAVLITEVMSHLIN*SRFLHA
Trigger: GGCATGAAGAAATCTGGACCAGTTTATTAAATGGGA...CATCACCTCCGTAATCAACACTGCCATTGTCTGAGCCTTCCCTTTGCAGGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CCA 90 bp TCCAGGATCTATCTGCAGCTCTATGACGCATCTCACCGAGTATCTGGCTTCTTTAACTCATTGCTGTTTTaGTGGCGTGTAAGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: SRIYLQLYDASHRVSGFFNSLLF*WRVSLS
Trigger: TGAAAGACTTACACGCCACCAAAACAGCAATGAGTT...AAAGAAGCCAGATACTCGGTGAGATGCGTCATAGAGCTGCAGATAGATCCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CCA 90 bp AAGTTACTATCACACAAAGTCGAAAGTAGACAGTTCCTCTTGACCTGGAATTGTGTGACAGGTGGAAGTTaGATGGGAACAACCCACCCA +
Preference number: 4 (lower is better)
Translates to: KLLSHKVESRQFLLTWNCVTGGS*MGTTHP
Trigger: TGGGTGGGTTGTTCCCATCCAACTTCCACCTGTCAC...ACAATTCCAGGTCAAGAGGAACTGTCTACTTTCGACTTTGTGTGATAGTAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
3UTR CAA 72 bp GTTCAAATGGTGTCTGAGGCACAGATCTTTGTAACGTaGCATTTTCACATTTGTGTGGCAGGACAAGCATGG +
Preference number: 4 (lower is better)
Translates to: VQMVSEAQIFVT*HFHICVAGQAW
Trigger: CCATGCTTGTCCTGCCACACAAATGTGAAAATGCAACGTTACAAAGATCTGTGCCTCAGACACCATTTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR TCA 90 bp GGCATAAATGTCTTTCAAGTTCCCAGAGAACTAACTCTAAGCCCATCTCACATTCCCCAATTTCTCATCTaGAGCCTCAGATGGCATCTT +
Preference number: 4 (lower is better)
Translates to: GINVFQVPRELTLSPSHIPQFLI*SLRWHL
Trigger: AAGATGCCATCTGAGGCTTCAGATGAGAAATTGGGG...AATGTGAGATGGGCTTAGAGTTAGTTCTCTGGGAACTTGAAAGACATTTATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262109.8
CDS-3UTR GCA 90 bp GGCATAAATGTCTTTCAAGTTCCCAGAGAACTAACTCTAAGCCCATCTCACATTGGAGGAAAAAGTCTCTaGAGCACCTTCTCCACAAAC +
Preference number: 4 (lower is better)
Translates to: GINVFQVPRELTLSPSHIGGKSL*STFSTN
Trigger: GTTTGTGGAGAAGGTGCTGCAGAGACTTTTTCCTCC...AATGTGAGATGGGCTTAGAGTTAGTTCTCTGGGAACTTGAAAGACATTTATGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262109.8
CDS-3UTR CCA 90 bp CATAAATGTCTTTCAAGTTCCCAGAGAACTAACTCTAAGCCCATCTCACATTTGGGTCACTTTCTTTGGTaGATTTTGGACGGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: HKCLSSSQRTNSKPISHLGHFLW*ILDGQR
Trigger: ACGCTGGCCGTCCAAAATCCACCAAAGAAAGTGACC...CAAATGTGAGATGGGCTTAGAGTTAGTTCTCTGGGAACTTGAAAGACATTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262109.8
CDS-3UTR CCA 90 bp CATAAATGTCTTTCAAGTTCCCAGAGAACTAACTCTAAGCCCATCTCACATTTGAAGCTGAGATTACTCTaGCATGGTCAGGAGGCATCG +
Preference number: 4 (lower is better)
Translates to: HKCLSSSQRTNSKPISHLKLRLL*HGQEAS
Trigger: CGATGCCTCCTGACCATGCCAGAGTAATCTCAGCTT...CAAATGTGAGATGGGCTTAGAGTTAGTTCTCTGGGAACTTGAAAGACATTTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262109.8
CDS-3UTR CCA 90 bp ATTTTTATATCAAGCAGAGATGCAGGAAGCCTGTTTCTCTCTGGGACTCTATTCATTTGCAGGTTTCTGTaGCCTGAATACCCTCACCAC +
Preference number: 4 (lower is better)
Translates to: IFISSRDAGSLFLSGTLFICRFL*PEYPHH
Trigger: GTGGTGAGGGTATTCAGGCCACAGAAACCTGCAAAT...GAATAGAGTCCCAGAGAGAAACAGGCTTCCTGCATCTCTGCTTGATATAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CCA 90 bp CTCCCGGTCCACTGCTTAAAAAGTTACTATCACACAAAGTCGAAAGTAGACAGTCAAGGAGCTGCTGTCTaGGAAATGCACTTATTAGGA +
Preference number: 4 (lower is better)
Translates to: LPVHCLKSYYHTKSKVDSQGAAV*EMHLLG
Trigger: TCCTAATAAGTGCATTTCCCAGACAGCAGCTCCTTG...ACTGTCTACTTTCGACTTTGTGTGATAGTAACTTTTTAAGCAGTGGACCGGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR CCA 90 bp ACCATTGGAAATCAACTTAATGGACTGTCCTGGAAAGGTAGTCAGTCTAGTCTAATCCTTCGTGACAGGTaGAAGTTGGATGGGAACAAC +
Preference number: 4 (lower is better)
Translates to: TIGNQLNGLSWKGSQSSLILRDR*KLDGNN
Trigger: GTTGTTCCCATCCAACTTCCACCTGTCACGAAGGAT...TAGACTAGACTGACTACCTTTCCAGGACAGTCCATTAAGTTGATTTCCAATGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CCA 90 bp ATTGATCCACAGATGTGTGCCGATTGCTGGGATAAAGAGATAACTAAGATTAGTGGAAATGCTGGCGGTTaGAACCTGTTCATTCTTGCC +
Preference number: 4 (lower is better)
Translates to: IDPQMCADCWDKEITKISGNAGG*NLFILA
Trigger: GGCAAGAATGAACAGGTTCCAACCGCCAGCATTTCC...ACTAATCTTAGTTATCTCTTTATCCCAGCAATCGGCACACATCTGTGGATCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CCA 90 bp TCTTGGGCTCCCGGTCCACTGCTTAAAAAGTTACTATCACACAAAGTCGAAAGTGAAAATGTAGACGTTTaGGAACTGTTGGAGACACAC +
Preference number: 4 (lower is better)
Translates to: SWAPGPLLKKLLSHKVESENVDV*ELLETH
Trigger: GTGTGTCTCCAACAGTTCCCAAACGTCTACATTTTC...ACTTTCGACTTTGTGTGATAGTAACTTTTTAAGCAGTGGACCGGGAGCCCAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CCA 90 bp AGTCTTGGGCTCCCGGTCCACTGCTTAAAAAGTTACTATCACACAAAGTCGAAATTAATGAATACGCTGTaGTCTCATGCAGCACAGAGA +
Preference number: 4 (lower is better)
Translates to: SLGLPVHCLKSYYHTKSKLMNTL*SHAAQR
Trigger: TCTCTGTGCTGCATGAGACCACAGCGTATTCATTAA...TTTCGACTTTGTGTGATAGTAACTTTTTAAGCAGTGGACCGGGAGCCCAAGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR TCA 90 bp ATATGGCATAAATGTCTTTCAAGTTCCCAGAGAACTAACTCTAAGCCCATCTCATCTGTGTGCTGTCGCTaGGATTTCTCCTGTAACAGA +
Preference number: 4 (lower is better)
Translates to: IWHKCLSSSQRTNSKPISSVCCR*DFSCNR
Trigger: TCTGTTACAGGAGAAATCTCAGCGACAGCACACAGA...TGAGATGGGCTTAGAGTTAGTTCTCTGGGAACTTGAAAGACATTTATGCCATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262109.8
CDS-3UTR GCA 90 bp AAATGTCTTTCAAGTTCCCAGAGAACTAACTCTAAGCCCATCTCACATTTGTCTGGTCAGGAGGCATCGTaGAATGTTCTGGGAACATTT +
Preference number: 4 (lower is better)
Translates to: KCLSSSQRTNSKPISHLSGQEAS*NVLGTF
Trigger: AAATGTTCCCAGAACATTGCACGATGCCTCCTGACC...AGACAAATGTGAGATGGGCTTAGAGTTAGTTCTCTGGGAACTTGAAAGACATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262109.8
CDS-3UTR GCA 90 bp GGAGGTAAGCAAAAATTTACCATCTACCACAGCAGTAGAGGAGAAGGAAAAGAGTATATCAAGCAGAGATaGAGGAAGCCTGTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: GGKQKFTIYHSSRGEGKEYIKQR*RKPVSL
Trigger: GAGAGAAACAGGCTTCCTGCATCTCTGCTTGATATA...CTCTTTTCCTTCTCCTCTACTGCTGTGGTAGATGGTAAATTTTTGCTTACCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CCA 90 bp AATGTCTTTCAAGTTCCCAGAGAACTAACTCTAAGCCCATCTCACATTTGTCTTAGAGGTCACTTTCTTTaGTGGATTTTGGACGGCCAG +
Preference number: 4 (lower is better)
Translates to: NVFQVPRELTLSPSHICLRGHFL*WILDGQ
Trigger: CTGGCCGTCCAAAATCCACCAAAGAAAGTGACCTCT...AAGACAAATGTGAGATGGGCTTAGAGTTAGTTCTCTGGGAACTTGAAAGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262109.8
CDS-3UTR CCA 90 bp TTCTATCAGTGGCTTAACATAAATGTCTGTGTACACAAAACCTGTCTGATGATTTCATGTGGTACAGGATaGACACGTCTGAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: FYQWLNINVCVHKTCLMISCGTG*TRLRAA
Trigger: TGCTGCCCTCAGACGTGTCCATCCTGTACCACATGA...AATCATCAGACAGGTTTTGTGTACACAGACATTTATGTTAAGCCACTGATAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CCA 90 bp AATGTCTTTCAAGTTCCCAGAGAACTAACTCTAAGCCCATCTCACATTTGTCTTAGCAGCGTTTTCATGTaGTACAGGATGGACACGTCT +
Preference number: 4 (lower is better)
Translates to: NVFQVPRELTLSPSHICLSSVFM*YRMDTS
Trigger: AGACGTGTCCATCCTGTACCACATGAAAACGCTGCT...AAGACAAATGTGAGATGGGCTTAGAGTTAGTTCTCTGGGAACTTGAAAGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262109.8
CDS-3UTR CCA 90 bp AAGTTACTATCACACAAAGTCGAAAGTAGACAGTTCCTCTTGACCTGGAATTGTAGCAGCGTTTTCATGTaGTACAGGATGGACACGTCT +
Preference number: 4 (lower is better)
Translates to: KLLSHKVESRQFLLTWNCSSVFM*YRMDTS
Trigger: AGACGTGTCCATCCTGTACCACATGAAAACGCTGCT...ACAATTCCAGGTCAAGAGGAACTGTCTACTTTCGACTTTGTGTGATAGTAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR GCA 90 bp CATAAATGTCTTTCAAGTTCCCAGAGAACTAACTCTAAGCCCATCTCACATTTGTTTTGCTTATTGTGGTaGCATCTGTGTGCTGTCGCT +
Preference number: 4 (lower is better)
Translates to: HKCLSSSQRTNSKPISHLFCLLW*HLCAVA
Trigger: AGCGACAGCACACAGATGGCACCACAATAAGCAAAA...CAAATGTGAGATGGGCTTAGAGTTAGTTCTCTGGGAACTTGAAAGACATTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262109.8
CDS-3UTR GCA 90 bp AATGTCTTTCAAGTTCCCAGAGAACTAACTCTAAGCCCATCTCACATTTGTCTTAATCTCTCAGTATCTTaGAGGAGCAGCAGCGTTTTC +
Preference number: 4 (lower is better)
Translates to: NVFQVPRELTLSPSHICLNLSVS*RSSSVF
Trigger: GAAAACGCTGCTGCTCCTGCAAGATACTGAGAGATT...AAGACAAATGTGAGATGGGCTTAGAGTTAGTTCTCTGGGAACTTGAAAGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262109.8
CDS-3UTR CCA 90 bp ATATGGCATAAATGTCTTTCAAGTTCCCAGAGAACTAACTCTAAGCCCATCTCACTTTCCTTGGCCACTTaGAACAGGAGGAAAAAGTCT +
Preference number: 4 (lower is better)
Translates to: IWHKCLSSSQRTNSKPISLSLAT*NRRKKS
Trigger: AGACTTTTTCCTCCTGTTCCAAGTGGCCAAGGAAAG...TGAGATGGGCTTAGAGTTAGTTCTCTGGGAACTTGAAAGACATTTATGCCATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262109.8
CDS-3UTR CCA 90 bp CTTTCAAGTTCCCAGAGAACTAACTCTAAGCCCATCTCACATTTGTCTTTTAAGCATCGTGCAATGTTCTaGGAACATTTCCAGAGCATG +
Preference number: 4 (lower is better)
Translates to: LSSSQRTNSKPISHLSFKHRAMF*EHFQSM
Trigger: CATGCTCTGGAAATGTTCCCAGAACATTGCACGATG...CTTAAAAGACAAATGTGAGATGGGCTTAGAGTTAGTTCTCTGGGAACTTGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262109.8
CDS-3UTR CCA 90 bp ACCATTGGAAATCAACTTAATGGACTGTCCTGGAAAGGTAGTCAGTCTAGTCTAACATCATGGAGTTTTTaGTCTCTTAATCTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: TIGNQLNGLSWKGSQSSLTSWSF*SLNLGG
Trigger: GCCTCCGAGATTAAGAGACCAAAAACTCCATGATGT...TAGACTAGACTGACTACCTTTCCAGGACAGTCCATTAAGTTGATTTCCAATGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CCA 90 bp ATTGATCCACAGATGTGTGCCGATTGCTGGGATAAAGAGATAACTAAGATTAGTATTTTCACATTTGTGTaGCAGGACAAGCATGGGGCA +
Preference number: 4 (lower is better)
Translates to: IDPQMCADCWDKEITKISIFTFV*QDKHGA
Trigger: TGCCCCATGCTTGTCCTGCCACACAAATGTGAAAAT...ACTAATCTTAGTTATCTCTTTATCCCAGCAATCGGCACACATCTGTGGATCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR TCA 90 bp AATGTCTTTCAAGTTCCCAGAGAACTAACTCTAAGCCCATCTCACATTTGTCTTGTAACTAAAGAAAGCTaGGATTACTCTGGCATGGTC +
Preference number: 4 (lower is better)
Translates to: NVFQVPRELTLSPSHICLVTKES*DYSGMV
Trigger: GACCATGCCAGAGTAATCTCAGCTTTCTTTAGTTAC...AAGACAAATGTGAGATGGGCTTAGAGTTAGTTCTCTGGGAACTTGAAAGACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262109.8
CDS-3UTR GCA 90 bp AAGTTACTATCACACAAAGTCGAAAGTAGACAGTTCCTCTTGACCTGGAATTGTCAGATGTGTGCCGATTaGTGGGATAAAGAGATAACT +
Preference number: 4 (lower is better)
Translates to: KLLSHKVESRQFLLTWNCQMCAD*WDKEIT
Trigger: AGTTATCTCTTTATCCCAGCAATCGGCACACATCTG...ACAATTCCAGGTCAAGAGGAACTGTCTACTTTCGACTTTGTGTGATAGTAACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CCA 90 bp CATAAATGTCTTTCAAGTTCCCAGAGAACTAACTCTAAGCCCATCTCACATTTGAATTCTTCTTCTCTTTaGCTGGTCATGAGGATCCTG +
Preference number: 4 (lower is better)
Translates to: HKCLSSSQRTNSKPISHLNSSSL*LVMRIL
Trigger: CAGGATCCTCATGACCAGCCAAAGAGAAGAAGAATT...CAAATGTGAGATGGGCTTAGAGTTAGTTCTCTGGGAACTTGAAAGACATTTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262109.8
CDS-3UTR CCA 90 bp CATAAATGTCTTTCAAGTTCCCAGAGAACTAACTCTAAGCCCATCTCACATTTGCTGAAGCTGCATCTCTaGAGACACCGTCATAAAAAT +
Preference number: 4 (lower is better)
Translates to: HKCLSSSQRTNSKPISHLLKLHL*RHRHKN
Trigger: ATTTTTATGACGGTGTCTCCAGAGATGCAGCTTCAG...CAAATGTGAGATGGGCTTAGAGTTAGTTCTCTGGGAACTTGAAAGACATTTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262109.8
CDS-3UTR CCA 90 bp AAGTTACTATCACACAAAGTCGAAAGTAGACAGTTCCTCTTGACCTGGAATTGTCTGAAGCTGCATCTCTaGAGACACCGTCATAAAAAT +
Preference number: 4 (lower is better)
Translates to: KLLSHKVESRQFLLTWNCLKLHL*RHRHKN
Trigger: ATTTTTATGACGGTGTCTCCAGAGATGCAGCTTCAG...ACAATTCCAGGTCAAGAGGAACTGTCTACTTTCGACTTTGTGTGATAGTAACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR CCA 90 bp ATTGATCCACAGATGTGTGCCGATTGCTGGGATAAAGAGATAACTAAGATTAGTGCAATGATGTATGTGTaGAGCGCAGTCATGTTCTTT +
Preference number: 4 (lower is better)
Translates to: IDPQMCADCWDKEITKISAMMYV*SAVMFF
Trigger: AAAGAACATGACTGCGCTCCACACATACATCATTGC...ACTAATCTTAGTTATCTCTTTATCCCAGCAATCGGCACACATCTGTGGATCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR TCA 90 bp TTCTATCAGTGGCTTAACATAAATGTCTGTGTACACAAAACCTGTCTGATGATTGAAAAGGATGCCCGGTaGAGGTGGCAGAAAATAAAA +
Preference number: 4 (lower is better)
Translates to: FYQWLNINVCVHKTCLMIEKDAR*RWQKIK
Trigger: TTTTATTTTCTGCCACCTTCACCGGGCATCCTTTTC...AATCATCAGACAGGTTTTGTGTACACAGACATTTATGTTAAGCCACTGATAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR GCA 90 bp GTAGATTGCCTTTTTCTTGAAAATGTAGACGTTTGGGAACTGTTGGAGACACACAACATTTCCAGAGCATaGTTCAATCTCTCAGTATCT +
Preference number: 4 (lower is better)
Translates to: VDCLFLENVDVWELLETHNISRA*FNLSVS
Trigger: AGATACTGAGAGATTGAAGCATGCTCTGGAAATGTT...GTGTGTCTCCAACAGTTCCCAAACGTCTACATTTTCAAGAAAAAGGCAATCTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CCA 90 bp AATGTCTTTCAAGTTCCCAGAGAACTAACTCTAAGCCCATCTCACATTTGTCTTTATTTTTGCTTATTGTaGTGCCATCTGTGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: NVFQVPRELTLSPSHICLYFCLL*CHLCAV
Trigger: GACAGCACACAGATGGCACCACAATAAGCAAAAATA...AAGACAAATGTGAGATGGGCTTAGAGTTAGTTCTCTGGGAACTTGAAAGACATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262109.8
CDS-3UTR CCA 90 bp AAGTTACTATCACACAAAGTCGAAAGTAGACAGTTCCTCTTGACCTGGAATTGTTATTTTTGCTTATTGTaGTGCCATCTGTGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: KLLSHKVESRQFLLTWNCYFCLL*CHLCAV
Trigger: GACAGCACACAGATGGCACCACAATAAGCAAAAATA...ACAATTCCAGGTCAAGAGGAACTGTCTACTTTCGACTTTGTGTGATAGTAACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522706.5
CDS-3UTR GCA 90 bp ATATGGCATAAATGTCTTTCAAGTTCCCAGAGAACTAACTCTAAGCCCATCTCAAACATTTCCAGAGCATaGTTCAATCTCTCAGTATCT +
Preference number: 4 (lower is better)
Translates to: IWHKCLSSSQRTNSKPISNISRA*FNLSVS
Trigger: AGATACTGAGAGATTGAAGCATGCTCTGGAAATGTT...TGAGATGGGCTTAGAGTTAGTTCTCTGGGAACTTGAAAGACATTTATGCCATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262109.8
CDS-3UTR GCA 90 bp AAGTTACTATCACACAAAGTCGAAAGTAGACAGTTCCTCTTGACCTGGAATTGTAACATTTCCAGAGCATaGTTCAATCTCTCAGTATCT +
Preference number: 4 (lower is better)
Translates to: KLLSHKVESRQFLLTWNCNISRA*FNLSVS
Trigger: AGATACTGAGAGATTGAAGCATGCTCTGGAAATGTT...ACAATTCCAGGTCAAGAGGAACTGTCTACTTTCGACTTTGTGTGATAGTAACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR CCA 90 bp TTCTATCAGTGGCTTAACATAAATGTCTGTGTACACAAAACCTGTCTGATGATTCTGAAGCTGCATCTCTaGAGACACCGTCATAAAAAT +
Preference number: 4 (lower is better)
Translates to: FYQWLNINVCVHKTCLMILKLHL*RHRHKN
Trigger: ATTTTTATGACGGTGTCTCCAGAGATGCAGCTTCAG...AATCATCAGACAGGTTTTGTGTACACAGACATTTATGTTAAGCCACTGATAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CCA 90 bp TTCTATCAGTGGCTTAACATAAATGTCTGTGTACACAAAACCTGTCTGATGATTGGCATCATCATACCGTaGTTATGTAACTGTTTGCTA +
Preference number: 4 (lower is better)
Translates to: FYQWLNINVCVHKTCLMIGIIIP*LCNCLL
Trigger: TAGCAAACAGTTACATAACCACGGTATGATGATGCC...AATCATCAGACAGGTTTTGTGTACACAGACATTTATGTTAAGCCACTGATAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CAA 90 bp CCCGCCTGGGGCCAACGCCGCCCTCTCCGCACACACAGGTGCCTTCTCAGGAGCACCTGTGGCTGCACCTaGGTCCACGCTGCAGGCCCC +
Preference number: 5 (lower is better)
Translates to: PAWGQRRPLRTHRCLLRSTCGCT*VHAAGP
Trigger: GGGGCCTGCAGCGTGGACCAAGGTGCAGCCACAGGT...GCTCCTGAGAAGGCACCTGTGTGTGCGGAGAGGGCGGCGTTGGCCCCAGGCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS GCA 90 bp CTTCTCCACAAACACGTGCTTCCTGTGCGCCGCCATGCGGGACCCTaGCGCGGACCTCAGACCACGGCGCGCGGTCCTGAGCTGAGCGCC +
Preference number: 5 (lower is better)
Translates to: LLHKHVLPVRRHAGP*RGPQTTARGPELSA
Trigger: GGCGCTCAGCTCAGGACCGCGCGCCGTGGTCTGAGGTCCGCGGCAGGGTCCCGCATGGCGGCGCACAGGAAGCACGTGTTTGTGGAGAAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262109.8
CDS-3UTR CAA 90 bp CCCGCCTGGGGCCAACGCCGCCCTCTCCGCACACACAGGTGCCTTCTCAGGAGCGGCCTTATGGCCCTCTaGAGCCTCAGCTGGAACCTG +
Preference number: 5 (lower is better)
Translates to: PAWGQRRPLRTHRCLLRSGLMAL*SLSWNL
Trigger: CAGGTTCCAGCTGAGGCTCAAGAGGGCCATAAGGCC...GCTCCTGAGAAGGCACCTGTGTGTGCGGAGAGGGCGGCGTTGGCCCCAGGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS GCA 90 bp GCAGCGTTTTCATGTGGTACAGGATGGACACGTCTGAGGGCAGCATaGTGTGTGACGCAAGGCGGTCCAGCAGCTCCTCAGCGGCATCTG +
Preference number: 5 (lower is better)
Translates to: AAFSCGTGWTRLRAA*CVTQGGPAAPQRHL
Trigger: CAGATGCCGCTGAGGAGCTGCTGGACCGCCTTGCGTCACACAGCATGCTGCCCTCAGACGTGTCCATCCTGTACCACATGAAAACGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262109.8
ENST00000522706.5
ENST00000522893.1
ENST00000523053.1
ENST00000523415.5
CDS-3UTR CAA 90 bp CTCCAGCACCCATATGCTCTGCACGCTGTGACTCCAGCCTTGTGGTCCCTGCAGTCACCGCACACGGCATaGGGAAGACATGAGCACAGC +
Preference number: 5 (lower is better)
Translates to: LQHPYALHAVTPALWSLQSPHTA*GRHEHS
Trigger: GCTGTGCTCATGTCTTCCCAATGCCGTGTGCGGTGA...CTGCAGGGACCACAAGGCTGGAGTCACAGCGTGCAGAGCATATGGGTGCTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CAA 90 bp CGCACACCCCATGCTCTCCTGGCTAAGCGGATTCAGCGCTGGCCAACAAACCCACTCATTCAAGCCACCTaGGAGCAGACGTGGCTACGC +
Preference number: 5 (lower is better)
Translates to: RTPHALLAKRIQRWPTNPLIQAT*EQTWLR
Trigger: GCGTAGCCACGTCTGCTCCAAGGTGGCTTGAATGAG...TGGGTTTGTTGGCCAGCGCTGAATCCGCTTAGCCAGGAGAGCATGGGGTGTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS CCA 90 bp CACAGGGTGTTGCCCTGCGAGGATCTGGGCACGCCAGGTGATGAGTaGCATGTGCACGACAATGTACGGATGGAAAGAGTCCACGTAGGT +
Preference number: 5 (lower is better)
Translates to: HRVLPCEDLGTPGDE*HVHDNVRMERVHVG
Trigger: ACCTACGTGGACTCTTTCCATCCGTACATTGTCGTGCACATGCCACTCATCACCTGGCGTGCCCAGATCCTCGCAGGGCAACACCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523709.1
CDS-3UTR CAA 90 bp GTCCACCTGGACGTTGGCTACAGCTGCCTAACCTGTGGCTGCACCTTGGTCCACATTTGGCTCCAAGAGTaGACAGCTCCCAAGTCCGGA +
Preference number: 5 (lower is better)
Translates to: VHLDVGYSCLTCGCTLVHIWLQE*TAPKSG
Trigger: TCCGGACTTGGGAGCTGTCAACTCTTGGAGCCAAAT...GTGGACCAAGGTGCAGCCACAGGTTAGGCAGCTGTAGCCAACGTCCAGGTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CAA 90 bp CCCTCAGCAATGTGGTTTCTACGGACAGAAACCACTCCCGACACTTACTCTGAAGCTGTGACTCCAGCCTaGTGGTCCCTGCAGCCCCCG +
Preference number: 5 (lower is better)
Translates to: PSAMWFLRTETTPDTYSEAVTPA*WSLQPP
Trigger: CGGGGGCTGCAGGGACCACAAGGCTGGAGTCACAGC...TTCAGAGTAAGTGTCGGGAGTGGTTTCTGTCCGTAGAAACCACATTGCTGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CAA 90 bp CTCTCCTGGCTAAGCGGATTCAGCGCTGGCCAACAAACCCAGACAGGTACGGCCACTGCTCCCAGGAATTaGGAGTTGATACCTGGGGAC +
Preference number: 5 (lower is better)
Translates to: LSWLSGFSAGQQTQTGTATAPRN*ELIPGD
Trigger: GTCCCCAGGTATCAACTCCAAATTCCTGGGAGCAGT...GGCCGTACCTGTCTGGGTTTGTTGGCCAGCGCTGAATCCGCTTAGCCAGGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS TCA 90 bp CGCAAGGCGGTCCAGCAGCTCCTCAGCGGCATCTGCGAGGGCAGCTaGAGCTGCATCTCTGGAGACACCGTCATAAAAATACATTTCCTG +
Preference number: 5 (lower is better)
Translates to: RKAVQQLLSGICEGS*SCISGDTVIKIHFL
Trigger: CAGGAAATGTATTTTTATGACGGTGTCTCCAGAGATGCAGCTTCAGCTGCCCTCGCAGATGCCGCTGAGGAGCTGCTGGACCGCCTTGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262109.8
ENST00000522706.5
ENST00000522893.1
ENST00000523415.5
CDS TCA 90 bp CGCAAGGCGGTCCAGCAGCTCCTCAGCGGCATCTGCGAGGGCAGCTaGAGCTGCATCTCTGGAGACACCTACATAAAGTCAGTTTTGCTT +
Preference number: 5 (lower is better)
Translates to: RKAVQQLLSGICEGS*SCISGDTYIKSVLL
Trigger: AAGCAAAACTGACTTTATGTAGGTGTCTCCAGAGATGCAGCTTCAGCTGCCCTCGCAGATGCCGCTGAGGAGCTGCTGGACCGCCTTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523053.1
CDS GCA 90 bp GCTCTGGGCTCCAGCAGGACGGGGATGGACGTATCCCTAGACACCTaGATCAGTCAAGGTCATGGATATTGGGAAGACAGACAGCAGCAG +
Preference number: 5 (lower is better)
Translates to: ALGSSRTGMDVSLDT*ISQGHGYWEDRQQQ
Trigger: CTGCTGCTGTCTGTCTTCCCAATATCCATGACCTTGACTGATGCAGGTGTCTAGGGATACGTCCATCCCCGTCCTGCTGGAGCCCAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519909.1
ENST00000523415.5
CDS GCA 90 bp GGTTCCCTCTTTCCTTGGCCACTTGGAACAGGAGGAAAAAGTCTCTaGAGCACCTTCTCCACAAACACTGCTGAGCCCGGAGCGTCCGAG +
Preference number: 5 (lower is better)
Translates to: GSLFPWPLGTGGKSL*STFSTNTAEPGASE
Trigger: CTCGGACGCTCCGGGCTCAGCAGTGTTTGTGGAGAAGGTGCTGCAGAGACTTTTTCCTCCTGTTCCAAGTGGCCAAGGAAAGAGGGAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518277.1
CDS-3UTR CAA 90 bp TCAGCAACCCCAACCTGGTCCATGCTGCAAGTACCTCTTGGCAAATCCTCAGCCTACCCTCACCACAGCTaGTGTCACCGCACACGGCAT +
Preference number: 5 (lower is better)
Translates to: SATPTWSMLQVPLGKSSAYPHHS*CHRTRH
Trigger: ATGCCGTGTGCGGTGACACAAGCTGTGGTGAGGGTA...GGCTGAGGATTTGCCAAGAGGTACTTGCAGCATGGACCAGGTTGGGGTTGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CAA 90 bp TTGTTGATGCCCGGCTCTGTGCCCGACAAGATGGTAGCTGTGGAGACTGATCTGGGAGGAAAGCACAGCTaGGCCTGGTACTCACCAAGC +
Preference number: 5 (lower is better)
Translates to: LLMPGSVPDKMVAVETDLGGKHS*AWYSPS
Trigger: GCTTGGTGAGTACCAGGCCAAGCTGTGCTTTCCTCC...CAGATCAGTCTCCACAGCTACCATCTTGTCGGGCACAGAGCCGGGCATCAACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS GCA 90 bp GGTTCCCTCTTTCCTTGGCCACTTGGAACAGGAGGAAAAAGTCTCTaGAGCACCTTCTCCACAAACACGTGCTTCCTGTGCGCCGCCATG +
Preference number: 5 (lower is better)
Translates to: GSLFPWPLGTGGKSL*STFSTNTCFLCAAM
Trigger: CATGGCGGCGCACAGGAAGCACGTGTTTGTGGAGAAGGTGCTGCAGAGACTTTTTCCTCCTGTTCCAAGTGGCCAAGGAAAGAGGGAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262109.8
CDS CCA 90 bp TCTCAGTATCTTGCAGGAGCAGCAGCGTTTTCATGTGGTACAGGATaGACACGTCTGAGGGCAGCATGCTGTGTGACGCAAGGCGGTCCA +
Preference number: 5 (lower is better)
Translates to: SQYLAGAAAFSCGTG*TRLRAACCVTQGGP
Trigger: TGGACCGCCTTGCGTCACACAGCATGCTGCCCTCAGACGTGTCCATCCTGTACCACATGAAAACGCTGCTGCTCCTGCAAGATACTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262109.8
ENST00000522706.5
ENST00000522893.1
ENST00000523053.1
ENST00000523415.5
CDS CCA 90 bp CTGAGCTCACATGTAGCCACTGATGTGCTGTGTGACCTGTACCATTaGCCCAGGCTCTCTGAGCTTCAGACTTCCCACCTCAAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: LSSHVATDVLCDLYH*PRLSELQTSHLKLQ
Trigger: CTGCAGCTTGAGGTGGGAAGTCTGAAGCTCAGAGAGCCTGGGCCAATGGTACAGGTCACACAGCACATCAGTGGCTACATGTGAGCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519909.1
CDS-3UTR CAA 90 bp GCTGCTGTCTGGGAAATGCACTTATTAGGAGAGGGACAAACTGTGACTGAGCCAACGCCTTCCCCTTCATaGCTGCTGTCCTCGGGCTGG +
Preference number: 5 (lower is better)
Translates to: AAVWEMHLLGEGQTVTEPTPSPS*LLSSGW
Trigger: CCAGCCCGAGGACAGCAGCAATGAAGGGGAAGGCGT...TGGCTCAGTCACAGTTTGTCCCTCTCCTAATAAGTGCATTTCCCAGACAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522706.5
CDS-3UTR CAA 90 bp GGACTTGGGCACTGCCTCATTCAAGCCACCTTGGAGCAGACGTGGCTACGCTCCCAATCTCTCAGTATCTaGCAGGAGCAGCAGCGTTTT +
Preference number: 5 (lower is better)
Translates to: GLGHCLIQATLEQTWLRSQSLSI*QEQQRF
Trigger: AAAACGCTGCTGCTCCTGCAAGATACTGAGAGATTG...GGAGCGTAGCCACGTCTGCTCCAAGGTGGCTTGAATGAGGCAGTGCCCAAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR CAA 90 bp CCCACAAGGCTCACATGCCCGGGGTCCCATGTGCCTGGTCCTGTCACCTTTCCCTGGTTATGTAACTGTTaGCTACCTGGCTTCTCTAAC +
Preference number: 5 (lower is better)
Translates to: PTRLTCPGSHVPGPVTFPWLCNC*LPGFSN
Trigger: GTTAGAGAAGCCAGGTAGCAAACAGTTACATAACCA...GGGAAAGGTGACAGGACCAGGCACATGGGACCCCGGGCATGTGAGCCTTGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CAA 90 bp CAACATACACTTGTTGATGCCCGGCTCTGTGCCCGACAAGATGGTAGCTGTGGACTCATTCAAGCCACCTaGGAGCAGACGTGGCTACGC +
Preference number: 5 (lower is better)
Translates to: QHTLVDARLCARQDGSCGLIQAT*EQTWLR
Trigger: GCGTAGCCACGTCTGCTCCAAGGTGGCTTGAATGAG...TCCACAGCTACCATCTTGTCGGGCACAGAGCCGGGCATCAACAAGTGTATGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR CAA 90 bp TGGGCACTGCCTCATTCAAGCCACCTTGGAGCAGACGTGGCTACGCTCCCAGCAGACGTTTGGGAACTGTaGGAGACACACACACATTCT +
Preference number: 5 (lower is better)
Translates to: WALPHSSHLGADVATLPADVWEL*ETHTHS
Trigger: AGAATGTGTGTGTGTCTCCAACAGTTCCCAAACGTC...TGCTGGGAGCGTAGCCACGTCTGCTCCAAGGTGGCTTGAATGAGGCAGTGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS GCA 90 bp TCAAGCTGCAGATGTAGAGAATCACCTGGAATTATCACAGGGTGTTaGCCTGCGAGGATCTGGGCACGCCAGGTGATGAGTGGCATGTGC +
Preference number: 5 (lower is better)
Translates to: SSCRCRESPGIITGC*PARIWARQVMSGMC
Trigger: GCACATGCCACTCATCACCTGGCGTGCCCAGATCCTCGCAGGGCAACACCCTGTGATAATTCCAGGTGATTCTCTACATCTGCAGCTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523709.1
CDS CCA 90 bp GACGGGGATGGACGTATCCCTAGACACCTGCATCAGTCAAGGTCATaGATATTGGGAAGACAGACAGCAGCAGACCCAGGTCTGAGCTCA +
Preference number: 5 (lower is better)
Translates to: DGDGRIPRHLHQSRS*ILGRQTAADPGLSS
Trigger: TGAGCTCAGACCTGGGTCTGCTGCTGTCTGTCTTCCCAATATCCATGACCTTGACTGATGCAGGTGTCTAGGGATACGTCCATCCCCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519909.1
ENST00000523415.5
CDS CCA 90 bp AGAGAATCACCTGGAATTATCACAGGGTGTTGCCCTGCGAGGATCTaGGCACGCCAGGTGATGAGTGGCATGTGCACGACAATGTACGGA +
Preference number: 5 (lower is better)
Translates to: RESPGIITGCCPARI*ARQVMSGMCTTMYG
Trigger: TCCGTACATTGTCGTGCACATGCCACTCATCACCTGGCGTGCCCAGATCCTCGCAGGGCAACACCCTGTGATAATTCCAGGTGATTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523709.1
CDS-3UTR CAA 90 bp CGGCCACTGAAGATCTCAGCTCTCGTCAGCCTTGCAAAGCTTGCTGCATCTGAGGCCAGTCAAAAGGACTaGGGCACTGCCTCATTCAAG +
Preference number: 5 (lower is better)
Translates to: RPLKISALVSLAKLAASEASQKD*GTASFK
Trigger: CTTGAATGAGGCAGTGCCCAAGTCCTTTTGACTGGC...CTCAGATGCAGCAAGCTTTGCAAGGCTGACGAGAGCTGAGATCTTCAGTGGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR CAA 90 bp TGGGCACTGCCTCATTCAAGCCACCTTGGAGCAGACGTGGCTACGCTCCCAGCATTATTCAACATACACTaGTTGATGCCCGGCTCTGTG +
Preference number: 5 (lower is better)
Translates to: WALPHSSHLGADVATLPALFNIH*LMPGSV
Trigger: CACAGAGCCGGGCATCAACAAGTGTATGTTGAATAA...TGCTGGGAGCGTAGCCACGTCTGCTCCAAGGTGGCTTGAATGAGGCAGTGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR CAA 90 bp TCAGCTCTCGTCAGCCTTGCAAAGCTTGCTGCATCTGAGTCTTGGGCTCCCGGTCAGACAATGGCAGTGTaGATTACGGAGGTGATGGCT +
Preference number: 5 (lower is better)
Translates to: SALVSLAKLAASESWAPGQTMAV*ITEVMA
Trigger: AGCCATCACCTCCGTAATCAACACTGCCATTGTCTG...ACCGGGAGCCCAAGACTCAGATGCAGCAAGCTTTGCAAGGCTGACGAGAGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS GCA 90 bp TGGCCCAGGCTCTCTGAGCTTCAGACTTCCCACCAGGAGGCATCGTaGAATGTTCTGGGAACATTTCCAGAGCATGCTTCAATCTCTCAG +
Preference number: 5 (lower is better)
Translates to: WPRLSELQTSHQEAS*NVLGTFPEHASISQ
Trigger: CTGAGAGATTGAAGCATGCTCTGGAAATGTTCCCAGAACATTGCACGATGCCTCCTGGTGGGAAGTCTGAAGCTCAGAGAGCCTGGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS CCA 90 bp CTCAGCATGTTTCTGGCTCACTTTCTCAGAGGTCACTTTCTTTGGTaGATTTTGGACGGCCAGCGTCTGGGGTTCCCTCTTTCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: LSMFLAHFLRGHFLW*ILDGQRLGFPLSLA
Trigger: GGCCAAGGAAAGAGGGAACCCCAGACGCTGGCCGTCCAAAATCCACCAAAGAAAGTGACCTCTGAGAAAGTGAGCCAGAAACATGCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262109.8
ENST00000518277.1
CDS-3UTR CAA 90 bp ATCCTTCGTGACAGGTGGAAGTTGGATGGGAACAACCCACCCAGCCAATTAGGTCAGCTCTCGTCAGCCTaGCAAAGCTTGCTGCATCTG +
Preference number: 5 (lower is better)
Translates to: ILRDRWKLDGNNPPSQLGQLSSA*QSLLHL
Trigger: CAGATGCAGCAAGCTTTGCAAGGCTGACGAGAGCTG...ACCTAATTGGCTGGGTGGGTTGTTCCCATCCAACTTCCACCTGTCACGAAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR CAA 90 bp CATCGGCCACTGAAGATCTCAGCTCTCGTCAGCCTTGCAAAGCTTGCTGCATCTGCCAGTCAAAAGGACTaGGGCACTGCCTCATTCAAG +
Preference number: 5 (lower is better)
Translates to: HRPLKISALVSLAKLAASASQKD*GTASFK
Trigger: CTTGAATGAGGCAGTGCCCAAGTCCTTTTGACTGGC...AGATGCAGCAAGCTTTGCAAGGCTGACGAGAGCTGAGATCTTCAGTGGCCGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR CAA 90 bp CATCGGCCACTGAAGATCTCAGCTCTCGTCAGCCTTGCAAAGCTTGCTGCATCTTTCAACATACACTTGTaGATGCCCGGCTCTGTGCCC +
Preference number: 5 (lower is better)
Translates to: HRPLKISALVSLAKLAASFNIHL*MPGSVP
Trigger: GGGCACAGAGCCGGGCATCAACAAGTGTATGTTGAA...AGATGCAGCAAGCTTTGCAAGGCTGACGAGAGCTGAGATCTTCAGTGGCCGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS GCA 90 bp CAGGTCCTTTCCCCAGACCCTCACCCAACGCCCACACACAGGACTTaGAGATTCCTGAAGACAAGTGGCTGCAGATGTTTCCATGATAAT +
Preference number: 5 (lower is better)
Translates to: QVLSPDPHPTPTHRT*RFLKTSGCRCFHDN
Trigger: ATTATCATGGAAACATCTGCAGCCACTTGTCTTCAGGAATCTGCAAGTCCTGTGTGTGGGCGTTGGGTGAGGGTCTGGGGAAAGGACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518895.1
CDS CCA 90 bp TGTTTCTGGCTCACTTTCTCAGAGGTCACTTTCTTTGGTGGATTTTaGACGGCCAGCGTCTGGGGTTCCCTCTTTCCTTGGCCACTTGGA +
Preference number: 5 (lower is better)
Translates to: CFWLTFSEVTFFGGF*TASVWGSLFPWPLG
Trigger: TCCAAGTGGCCAAGGAAAGAGGGAACCCCAGACGCTGGCCGTCCAAAATCCACCAAAGAAAGTGACCTCTGAGAAAGTGAGCCAGAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262109.8
ENST00000518277.1
CDS-3UTR CAA 90 bp TGGGCACTGCCTCATTCAAGCCACCTTGGAGCAGACGTGGCTACGCTCCCAGCACTGTGTGCCTTTTCATaGGTAATTGTATCATCTTCC +
Preference number: 5 (lower is better)
Translates to: WALPHSSHLGADVATLPALCAFS*VIVSSS
Trigger: GGAAGATGATACAATTACCAATGAAAAGGCACACAG...TGCTGGGAGCGTAGCCACGTCTGCTCCAAGGTGGCTTGAATGAGGCAGTGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522706.5
CDS-3UTR CAA 90 bp TTGTTGATGCCCGGCTCTGTGCCCGACAAGATGGTAGCTGTGGAGACTGATCTGCAATCTCTCAGTATCTaGCAGGAGCAGCAGCGTTTT +
Preference number: 5 (lower is better)
Translates to: LLMPGSVPDKMVAVETDLQSLSI*QEQQRF
Trigger: AAAACGCTGCTGCTCCTGCAAGATACTGAGAGATTG...CAGATCAGTCTCCACAGCTACCATCTTGTCGGGCACAGAGCCGGGCATCAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR CAA 90 bp ACACAGTTCCCTCCGAGAAGTGATGCTCTGCCGGGGAATAATTTTATTATGAATTGTTCCGTCGTTGACTaGTGTCCCGCCTCGCCGGGC +
Preference number: 5 (lower is better)
Translates to: TQFPPRSDALPGNNFIMNCSVVD*CPASPG
Trigger: GCCCGGCGAGGCGGGACACAAGTCAACGACGGAACA...ATTCATAATAAAATTATTCCCCGGCAGAGCATCACTTCTCGGAGGGAACTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CAA 90 bp TTAAGTACTTGCTGTAAGAGGCCTGACAACCCACCAGAAACAGATGCCCGCCTGCCAGCACACAACAGTTaGCATGAAAAGGATGCCCGG +
Preference number: 5 (lower is better)
Translates to: LSTCCKRPDNPPETDARLPAHNS*HEKDAR
Trigger: CCGGGCATCCTTTTCATGCAAACTGTTGTGTGCTGG...CAGGCGGGCATCTGTTTCTGGTGGGTTGTCAGGCCTCTTACAGCAAGTACTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CAA 90 bp AAGCCCACAAGGCTCACATGCCCGGGGTCCCATGTGCCTGGTCCTGTCACCTTTACTGCCAAAACTCTTTaGGTGAATTTCAGAAAAGCC +
Preference number: 5 (lower is better)
Translates to: KPTRLTCPGSHVPGPVTFTAKTL*VNFRKA
Trigger: GGCTTTTCTGAAATTCACCAAAAGAGTTTTGGCAGT...AAAGGTGACAGGACCAGGCACATGGGACCCCGGGCATGTGAGCCTTGTGGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CAA 90 bp CCAGGGAGAGCTAAGGAAATGCTGGCGGTTGGAACCTGTTCATTCTTGCCTAGACCTCTTGACCTGGAATaGTCCAAGTCAGCACCACAG +
Preference number: 5 (lower is better)
Translates to: PGRAKEMLAVGTCSFLPRPLDLE*SKSAPQ
Trigger: CTGTGGTGCTGACTTGGACAATTCCAGGTCAAGAGG...TCTAGGCAAGAATGAACAGGTTCCAACCGCCAGCATTTCCTTAGCTCTCCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CAA 90 bp CTGAAGATCTCAGCTCTCGTCAGCCTTGCAAAGCTTGCTGCATCTGAGTCTTGGTCAGCCTTGCAAAGCTaGCTGCATCTGAGTCTTGGG +
Preference number: 5 (lower is better)
Translates to: LKISALVSLAKLAASESWSALQS*LHLSLG
Trigger: CCCAAGACTCAGATGCAGCAAGCTTTGCAAGGCTGA...CCAAGACTCAGATGCAGCAAGCTTTGCAAGGCTGACGAGAGCTGAGATCTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR CAA 90 bp CCAAGGAGCTGCTGTCTGGGAAATGCACTTATTAGGAGAGGGACAAACTGTGACCAGCTCTCGTCAGCCTaGCAAAGCTTGCTGCATCTG +
Preference number: 5 (lower is better)
Translates to: PRSCCLGNALIRRGTNCDQLSSA*QSLLHL
Trigger: CAGATGCAGCAAGCTTTGCAAGGCTGACGAGAGCTG...GTCACAGTTTGTCCCTCTCCTAATAAGTGCATTTCCCAGACAGCAGCTCCTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR CAA 90 bp CCAGGGAGAGCTAAGGAAATGCTGGCGGTTGGAACCTGTTCATTCTTGCCTAGATTCAACATACACTTGTaGATGCCCGGCTCTGTGCCC +
Preference number: 5 (lower is better)
Translates to: PGRAKEMLAVGTCSFLPRFNIHL*MPGSVP
Trigger: GGGCACAGAGCCGGGCATCAACAAGTGTATGTTGAA...TCTAGGCAAGAATGAACAGGTTCCAACCGCCAGCATTTCCTTAGCTCTCCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CAA 90 bp AGACGTTTGGGAACTGTTGGAGACACACACACATTCTCAGCCCATCACTCCGCCAGGAAATGCTGGCGGTaGGAACCTGTTCATTCTTGC +
Preference number: 5 (lower is better)
Translates to: RRLGTVGDTHTFSAHHSARKCWR*EPVHSC
Trigger: GCAAGAATGAACAGGTTCCAACCGCCAGCATTTCCT...GGCGGAGTGATGGGCTGAGAATGTGTGTGTGTCTCCAACAGTTCCCAAACGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CAA 90 bp CCAGCAGCCCTGTACCCATCGGCCACTGAAGATCTCAGCTCTCGTCAGCCTTGCATAGACAGCACAGAATaGTCTGTAGAGTCTGACATA +
Preference number: 5 (lower is better)
Translates to: PAALYPSATEDLSSRQPCIDSTE*SVESDI
Trigger: TATGTCAGACTCTACAGACAATTCTGTGCTGTCTAT...GCAAGGCTGACGAGAGCTGAGATCTTCAGTGGCCGATGGGTACAGGGCTGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CAA 90 bp CTGAAGATCTCAGCTCTCGTCAGCCTTGCAAAGCTTGCTGCATCTGAGTCTTGGCCCAGGAATTTGGAGTaGATACCTGGGGACCACAAC +
Preference number: 5 (lower is better)
Translates to: LKISALVSLAKLAASESWPRNLE*IPGDHN
Trigger: GTTGTGGTCCCCAGGTATCAACTCCAAATTCCTGGG...CCAAGACTCAGATGCAGCAAGCTTTGCAAGGCTGACGAGAGCTGAGATCTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS CCA 90 bp TTCTCAGAGGTCACTTTCTTTGGTGGATTTTGGACGGCCAGCGTCTaGGGTTCCCTCTTTCCTTGGCCACTTGGAACAGGAGGAAAAAGT +
Preference number: 5 (lower is better)
Translates to: FSEVTFFGGFWTASV*GSLFPWPLGTGGKS
Trigger: ACTTTTTCCTCCTGTTCCAAGTGGCCAAGGAAAGAGGGAACCCCAGACGCTGGCCGTCCAAAATCCACCAAAGAAAGTGACCTCTGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262109.8
ENST00000518277.1
CDS CCA 90 bp ATTCCTGAGTCCATGTCATCGGTGTTGGTTCCTTGGGGATGGACCTaGAATACTTTTCCACGTTGGGTGCAGCTGGGACTGAAGATCTTC +
Preference number: 5 (lower is better)
Translates to: IPESMSSVLVPWGWT*NTFPRWVQLGLKIF
Trigger: GAAGATCTTCAGTCCCAGCTGCACCCAACGTGGAAAAGTATTCCAGGTCCATCCCCAAGGAACCAACACCGATGACATGGACTCAGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523709.1
CDS-3UTR CAA 90 bp TCCATGGTCCACCTGGACGTTGGCTACAGCTGCCTAACCTGTGGCTGCACCTTGCTGTGTGCCTTTTCATaGGTAATTGTATCATCTTCC +
Preference number: 5 (lower is better)
Translates to: SMVHLDVGYSCLTCGCTLLCAFS*VIVSSS
Trigger: GGAAGATGATACAATTACCAATGAAAAGGCACACAG...CAAGGTGCAGCCACAGGTTAGGCAGCTGTAGCCAACGTCCAGGTGGACCATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CAA 90 bp TCAGCAACCCCAACCTGGTCCATGCTGCAAGTACCTCTTGGCAAATCCTCAGCCCAACTCATTGCTGTTTaGGTGGCGTGTAAGTCTTTC +
Preference number: 5 (lower is better)
Translates to: SATPTWSMLQVPLGKSSAQLIAV*VACKSF
Trigger: GAAAGACTTACACGCCACCAAAACAGCAATGAGTTG...GGCTGAGGATTTGCCAAGAGGTACTTGCAGCATGGACCAGGTTGGGGTTGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CAA 90 bp TTAAGTACTTGCTGTAAGAGGCCTGACAACCCACCAGAAACAGATGCCCGCCTGTCTAACATGCTGGTCTaGACCCCTCAGCAATGTGGT +
Preference number: 5 (lower is better)
Translates to: LSTCCKRPDNPPETDARLSNMLV*TPQQCG
Trigger: ACCACATTGCTGAGGGGTCAAGACCAGCATGTTAGA...CAGGCGGGCATCTGTTTCTGGTGGGTTGTCAGGCCTCTTACAGCAAGTACTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS GCA 90 bp CCACCAGGAGGCATCGTGCAATGTTCTGGGAACATTTCCAGAGCATaGTTCAATCTCTCAGTATCTTGCAGGAGCAGCAGCGTTTTCATG +
Preference number: 5 (lower is better)
Translates to: PPGGIVQCSGNISRA*FNLSVSCRSSSVFM
Trigger: CATGAAAACGCTGCTGCTCCTGCAAGATACTGAGAGATTGAAGCATGCTCTGGAAATGTTCCCAGAACATTGCACGATGCCTCCTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS CCA 90 bp TATAAGATTCCTGAGTCCATGTCATCGGTGTTGGTTCCTTGGGGATaGACCTGGAATACTTTTCCACGTTGGGTGCAGCTGGGACTGAAG +
Preference number: 5 (lower is better)
Translates to: YKIPESMSSVLVPWG*TWNTFPRWVQLGLK
Trigger: CTTCAGTCCCAGCTGCACCCAACGTGGAAAAGTATTCCAGGTCCATCCCCAAGGAACCAACACCGATGACATGGACTCAGGAATCTTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523709.1
CDS CCA 90 bp GTAGGTTATAAGATTCCTGAGTCCATGTCATCGGTGTTGGTTCCTTaGGGATGGACCTGGAATACTTTTCCACGTTGGGTGCAGCTGGGA +
Preference number: 5 (lower is better)
Translates to: VGYKIPESMSSVLVP*GWTWNTFPRWVQLG
Trigger: TCCCAGCTGCACCCAACGTGGAAAAGTATTCCAGGTCCATCCCCAAGGAACCAACACCGATGACATGGACTCAGGAATCTTATAACCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523709.1
CDS-3UTR CAA 90 bp CTGAGTCTTGGGCTCCCGGTCCACTGCTTAAAAAGTTACTATCACACAAAGTCGCCTCTTGACCTGGAATaGTCCAAGTCAGCACCACAG +
Preference number: 5 (lower is better)
Translates to: LSLGLPVHCLKSYYHTKSPLDLE*SKSAPQ
Trigger: CTGTGGTGCTGACTTGGACAATTCCAGGTCAAGAGG...CGACTTTGTGTGATAGTAACTTTTTAAGCAGTGGACCGGGAGCCCAAGACTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS GCA 90 bp TGGTCAGGAGGCATCGTGCAATGTTCTGGGAACATTTCCAGAGCATaGTTCAATCTCTCAGTATCTTGCAGGAGCAGCAGCGTTTTCATG +
Preference number: 5 (lower is better)
Translates to: WSGGIVQCSGNISRA*FNLSVSCRSSSVFM
Trigger: CATGAAAACGCTGCTGCTCCTGCAAGATACTGAGAGATTGAAGCATGCTCTGGAAATGTTCCCAGAACATTGCACGATGCCTCCTGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262109.8
ENST00000523053.1
CDS GCA 90 bp ACTCCAGGAGGCATCGTGCAATGTTCTGGGAACATTTCCAGAGCATaGTTCAATCTCTCAGTATCTTGCAGGAGCAGCAGCGTTTTCATG +
Preference number: 5 (lower is better)
Translates to: TPGGIVQCSGNISRA*FNLSVSCRSSSVFM
Trigger: CATGAAAACGCTGCTGCTCCTGCAAGATACTGAGAGATTGAAGCATGCTCTGGAAATGTTCCCAGAACATTGCACGATGCCTCCTGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522706.5
CDS CCA 90 bp TCGGTGTTGGTTCCTTGGGGATGGACCTGGAATACTTTTCCACGTTaGGTGCAGCTGGGACTGAAGATCTTCCAATTTGATTTCGACAAG +
Preference number: 5 (lower is better)
Translates to: SVLVPWGWTWNTFPR*VQLGLKIFQFDFDK
Trigger: CTTGTCGAAATCAAATTGGAAGATCTTCAGTCCCAGCTGCACCCAACGTGGAAAAGTATTCCAGGTCCATCCCCAAGGAACCAACACCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523709.1
CDS CCA 90 bp TCTCTGAGCTTCAGACTTCCCACCAGGAGGCATCGTGCAATGTTCTaGGAACATTTCCAGAGCATGCTTCAATCTCTCAGTATCTTGCAG +
Preference number: 5 (lower is better)
Translates to: SLSFRLPTRRHRAMF*EHFQSMLQSLSILQ
Trigger: CTGCAAGATACTGAGAGATTGAAGCATGCTCTGGAAATGTTCCCAGAACATTGCACGATGCCTCCTGGTGGGAAGTCTGAAGCTCAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CAA 90 bp CTTTCAAGTTCCCAGAGAACTAACTCTAAGCCCATCTCACATTTGTCTTTTAAGACGCCTTCCCCTTCATaGCTGCTGTCCTCGGGCTGG +
Preference number: 5 (lower is better)
Translates to: LSSSQRTNSKPISHLSFKTPSPS*LLSSGW
Trigger: CCAGCCCGAGGACAGCAGCAATGAAGGGGAAGGCGT...CTTAAAAGACAAATGTGAGATGGGCTTAGAGTTAGTTCTCTGGGAACTTGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262109.8
CDS-3UTR CAA 90 bp ATCAATTCATTCTTTATTCAACATACACTTGTTGATGCCCGGCTCTGTGCCCGATCAAGTGTTCCGTCGTaGACTTGTGTCCCGCCTCGC +
Preference number: 5 (lower is better)
Translates to: INSFFIQHTLVDARLCARSSVPS*TCVPPR
Trigger: GCGAGGCGGGACACAAGTCAACGACGGAACACTTGA...TCGGGCACAGAGCCGGGCATCAACAAGTGTATGTTGAATAAAGAATGAATTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CAA 90 bp CTGAAGATCTCAGCTCTCGTCAGCCTTGCAAAGCTTGCTGCATCTGAGTCTTGGGTTGCATTTTCACATTaGTGTGGCAGGACAAGCATG +
Preference number: 5 (lower is better)
Translates to: LKISALVSLAKLAASESWVAFSH*CGRTSM
Trigger: CATGCTTGTCCTGCCACACAAATGTGAAAATGCAAC...CCAAGACTCAGATGCAGCAAGCTTTGCAAGGCTGACGAGAGCTGAGATCTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CAA 90 bp GAGGGACAAACTGTGACTGAGCCACAGGCTCACCTCAGCCAGTCAAAAGGACTTTCTGACCCTTCACCATaGGAAATCAACTTAATGGAC +
Preference number: 5 (lower is better)
Translates to: EGQTVTEPQAHLSQSKGLSDPSP*EINLMD
Trigger: GTCCATTAAGTTGATTTCCAATGGTGAAGGGTCAGA...AAGTCCTTTTGACTGGCTGAGGTGAGCCTGTGGCTCAGTCACAGTTTGTCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS GCA 90 bp TGTTCTGGGAACATTTCCAGAGCATGCTTCAATCTCTCAGTATCTTaGAGGAGCAGCAGCGTTTTCATGTGGTACAGGATGGACACGTCT +
Preference number: 5 (lower is better)
Translates to: CSGNISRACFNLSVS*RSSSVFMWYRMDTS
Trigger: AGACGTGTCCATCCTGTACCACATGAAAACGCTGCTGCTCCTGCAAGATACTGAGAGATTGAAGCATGCTCTGGAAATGTTCCCAGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262109.8
ENST00000522706.5
ENST00000522893.1
ENST00000523053.1
ENST00000523415.5
CDS GCA 90 bp TTACCAGGAGGCATCGTGCAATGTTCTGGGAACATTTCCAGAGCATaGTTCAATCTCTCAGTATCTTGCAGGAGCAGCAGCGTTTTCATG +
Preference number: 5 (lower is better)
Translates to: LPGGIVQCSGNISRA*FNLSVSCRSSSVFM
Trigger: CATGAAAACGCTGCTGCTCCTGCAAGATACTGAGAGATTGAAGCATGCTCTGGAAATGTTCCCAGAACATTGCACGATGCCTCCTGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS CCA 90 bp GATCCCTTCAACAGGTGTTTCCCATCCTGGCTTTCTGGTTACTCCTaGCATGACTGTTGGTCTGCCCCAAGCGTCATAAAAATACATTTC +
Preference number: 5 (lower is better)
Translates to: DPFNRCFPSWLSGYS*HDCWSAPSVIKIHF
Trigger: GAAATGTATTTTTATGACGCTTGGGGCAGACCAACAGTCATGCCAGGAGTAACCAGAAAGCCAGGATGGGAAACACCTGTTGAAGGGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518895.1
CDS-3UTR CAA 90 bp GGAGGTAAGCAAAAATTTACCATCTACCACAGCAGTAGAGGAGAAGGAAAAGAGAAAGCCAACAGCTCCTaGACGGATGAGGGCGTTCTG +
Preference number: 5 (lower is better)
Translates to: GGKQKFTIYHSSRGEGKEKANSS*TDEGVL
Trigger: CAGAACGCCCTCATCCGTCAAGGAGCTGTTGGCTTT...CTCTTTTCCTTCTCCTCTACTGCTGTGGTAGATGGTAAATTTTTGCTTACCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CAA 90 bp TCATTCTTTATTCAACATACACTTGTTGATGCCCGGCTCTGTGCCCGACAAGATTCAGCCTTGCAAAGCTaGCTGCATCTGAGTCTTGGG +
Preference number: 5 (lower is better)
Translates to: SFFIQHTLVDARLCARQDSALQS*LHLSLG
Trigger: CCCAAGACTCAGATGCAGCAAGCTTTGCAAGGCTGA...ATCTTGTCGGGCACAGAGCCGGGCATCAACAAGTGTATGTTGAATAAAGAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522706.5
ENST00000523415.5
CDS-3UTR CAA 90 bp AGACAGTTCCTCTTGACCTGGAATTGTCCAAGTCAGCACCACAGCTGGTTAAGGGGAACCTGTTCATTCTaGCCTAGAGTAAGGTACCTT +
Preference number: 5 (lower is better)
Translates to: RQFLLTWNCPSQHHSWLRGTCSF*PRVRYL
Trigger: AAGGTACCTTACTCTAGGCAAGAATGAACAGGTTCC...CCTTAACCAGCTGTGGTGCTGACTTGGACAATTCCAGGTCAAGAGGAACTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CAA 90 bp TTGTTGATGCCCGGCTCTGTGCCCGACAAGATGGTAGCTGTGGAGACTGATCTGCAGATCTTTGTAACGTaGCATTTTCACATTTGTGTG +
Preference number: 5 (lower is better)
Translates to: LLMPGSVPDKMVAVETDLQIFVT*HFHICV
Trigger: CACACAAATGTGAAAATGCAACGTTACAAAGATCTG...CAGATCAGTCTCCACAGCTACCATCTTGTCGGGCACAGAGCCGGGCATCAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS GCA 90 bp AGCAGGACCTTGAATAAATCGTACGGTACTTACCAGGAGGCATCGTaGAATGTTCTGGGAACATTTCCAGAGCATGCTTCAATCTCTCAG +
Preference number: 5 (lower is better)
Translates to: SRTLNKSYGTYQEAS*NVLGTFPEHASISQ
Trigger: CTGAGAGATTGAAGCATGCTCTGGAAATGTTCCCAGAACATTGCACGATGCCTCCTGGTAAGTACCGTACGATTTATTCAAGGTCCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CAA 90 bp CTTTCAAGTTCCCAGAGAACTAACTCTAAGCCCATCTCACATTTGTCTTTTAAGGGGTTCCCTCTTTCCTaGGCCACTTGGAACAGGAGG +
Preference number: 5 (lower is better)
Translates to: LSSSQRTNSKPISHLSFKGFPLS*ATWNRR
Trigger: CCTCCTGTTCCAAGTGGCCAAGGAAAGAGGGAACCC...CTTAAAAGACAAATGTGAGATGGGCTTAGAGTTAGTTCTCTGGGAACTTGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262109.8
CDS-3UTR CAA 90 bp TCTGAGTCTTGGGCTCCCGGTCCACTGCTTAAAAAGTTACTATCACACAAAGTCAGTCTGACATACAAATaGCTGGGAGTTAGGCCTGAG +
Preference number: 5 (lower is better)
Translates to: SESWAPGPLLKKLLSHKVSLTYK*LGVRPE
Trigger: CTCAGGCCTAACTCCCAGCAATTTGTATGTCAGACT...GACTTTGTGTGATAGTAACTTTTTAAGCAGTGGACCGGGAGCCCAAGACTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS TCA 90 bp AGGTCTCAAACCTACGCTTCCACACAGAATGACATATCTGGGAGATaGGAAGCTACCAGAAGAGAGAATCAGAACAGAGCTCAGCACAAA +
Preference number: 5 (lower is better)
Translates to: RSQTYASTQNDISGR*EATRRENQNRAQHK
Trigger: TTTGTGCTGAGCTCTGTTCTGATTCTCTCTTCTGGTAGCTTCTCATCTCCCAGATATGTCATTCTGTGTGGAAGCGTAGGTTTGAGACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523053.1
CDS GCA 90 bp AGGAAGCCTGTTTCTCTCTGGGACTCTATTCTCCCATGCCATATGTaGAGTGTCATATTTTCCAACTCATTGCTGTTTTGGTGGCGTGTA +
Preference number: 5 (lower is better)
Translates to: RKPVSLWDSILPCHM*SVIFSNSLLFWWRV
Trigger: TACACGCCACCAAAACAGCAATGAGTTGGAAAATATGACACTGCACATATGGCATGGGAGAATAGAGTCCCAGAGAGAAACAGGCTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS GCA 90 bp CAGAGATGCAGGAAGCCTGTTTCTCTCTGGGACTCTATTCTCCCATaGCATATGTGCAGTGTCATATTTTCCAACTCATTGCTGTTTTGG +
Preference number: 5 (lower is better)
Translates to: QRCRKPVSLWDSILP*HMCSVIFSNSLLFW
Trigger: CCAAAACAGCAATGAGTTGGAAAATATGACACTGCACATATGGCATGGGAGAATAGAGTCCCAGAGAGAAACAGGCTTCCTGCATCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CAA 90 bp AAATGTCTTTCAAGTTCCCAGAGAACTAACTCTAAGCCCATCTCACATTTGTCTTTTCTTTGGTGGATTTaGGACGGCCAGCGTCTGGGG +
Preference number: 5 (lower is better)
Translates to: KCLSSSQRTNSKPISHLSFLWWI*DGQRLG
Trigger: CCCCAGACGCTGGCCGTCCAAAATCCACCAAAGAAA...AGACAAATGTGAGATGGGCTTAGAGTTAGTTCTCTGGGAACTTGAAAGACATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262109.8
CDS-3UTR CAA 90 bp CCCTCAGCAATGTGGTTTCTACGGACAGAAACCACTCCCGACACTTACTCTGAAATCTTAAGCAGGACCTaGAATAAATCGTACGGTACT +
Preference number: 5 (lower is better)
Translates to: PSAMWFLRTETTPDTYSEILSRT*NKSYGT
Trigger: AGTACCGTACGATTTATTCAAGGTCCTGCTTAAGAT...TTCAGAGTAAGTGTCGGGAGTGGTTTCTGTCCGTAGAAACCACATTGCTGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CAA 90 bp TTCTATCAGTGGCTTAACATAAATGTCTGTGTACACAAAACCTGTCTGATGATTTCAGCGCATGCGCACTaGGCTGCAACAACACCCTCC +
Preference number: 5 (lower is better)
Translates to: FYQWLNINVCVHKTCLMISAHAH*AATTPS
Trigger: GGAGGGTGTTGTTGCAGCCAAGTGCGCATGCGCTGA...AATCATCAGACAGGTTTTGTGTACACAGACATTTATGTTAAGCCACTGATAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CAA 90 bp TGTAACGTTGCATTTTCACATTTGTGTGGCAGGACAAGCATGGGGCAAGAGGGAGCTGCAGACAGCTATTaGGCAAATGCTATGAACTAT +
Preference number: 5 (lower is better)
Translates to: CNVAFSHLCGRTSMGQEGAADSY*ANAMNY
Trigger: ATAGTTCATAGCATTTGCCAAATAGCTGTCTGCAGC...TCCCTCTTGCCCCATGCTTGTCCTGCCACACAAATGTGAAAATGCAACGTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS CCA 90 bp CCATGCCATATGTGCAGTGTCATATTTTCCAACTCATTGCTGTTTTaGTGGCGTGTAAGTCTTTCAGAGGCAAACCTCGATGAGAGTATC +
Preference number: 5 (lower is better)
Translates to: PCHMCSVIFSNSLLF*WRVSLSEANLDESI
Trigger: GATACTCTCATCGAGGTTTGCCTCTGAAAGACTTACACGCCACCAAAACAGCAATGAGTTGGAAAATATGACACTGCACATATGGCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CAA 90 bp GGAGGTAAGCAAAAATTTACCATCTACCACAGCAGTAGAGGAGAAGGAAAAGAGCAATCTCTCAGTATCTaGCAGGAGCAGCAGCGTTTT +
Preference number: 5 (lower is better)
Translates to: GGKQKFTIYHSSRGEGKEQSLSI*QEQQRF
Trigger: AAAACGCTGCTGCTCCTGCAAGATACTGAGAGATTG...CTCTTTTCCTTCTCCTCTACTGCTGTGGTAGATGGTAAATTTTTGCTTACCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CAA 90 bp GGCATAAATGTCTTTCAAGTTCCCAGAGAACTAACTCTAAGCCCATCTCACATTTCTTTCCTTGGCCACTaGGAACAGGAGGAAAAAGTC +
Preference number: 5 (lower is better)
Translates to: GINVFQVPRELTLSPSHISFLGH*EQEEKV
Trigger: GACTTTTTCCTCCTGTTCCAAGTGGCCAAGGAAAGA...AATGTGAGATGGGCTTAGAGTTAGTTCTCTGGGAACTTGAAAGACATTTATGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262109.8
CDS-3UTR CAA 90 bp ATCAATTCATTCTTTATTCAACATACACTTGTTGATGCCCGGCTCTGTGCCCGAGCGCAGTCATGTTCTTaGTTACGCAACACAGTTTTC +
Preference number: 5 (lower is better)
Translates to: INSFFIQHTLVDARLCARAQSCS*LRNTVF
Trigger: GAAAACTGTGTTGCGTAACAAAGAACATGACTGCGC...TCGGGCACAGAGCCGGGCATCAACAAGTGTATGTTGAATAAAGAATGAATTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CAA 90 bp ATACGCTGTGGTCTCATGCAGCACAGAGAACCTAGGGAAATTATCCTAATTAATACTCAGAGCCAACTATaGAGGACCTGGGAACTTATG +
Preference number: 5 (lower is better)
Translates to: IRCGLMQHREPREIILINTQSQL*RTWELM
Trigger: CATAAGTTCCCAGGTCCTCAATAGTTGGCTCTGAGT...ATTAATTAGGATAATTTCCCTAGGTTCTCTGTGCTGCATGAGACCACAGCGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS CCA 90 bp TGCCATATGTGCAGTGTCATATTTTCCAACTCATTGCTGTTTTGGTaGCGTGTAAGTCTTTCAGAGGCAAACCTCGATGAGAGTATCTTA +
Preference number: 5 (lower is better)
Translates to: CHMCSVIFSNSLLFW*RVSLSEANLDESIL
Trigger: TAAGATACTCTCATCGAGGTTTGCCTCTGAAAGACTTACACGCCACCAAAACAGCAATGAGTTGGAAAATATGACACTGCACATATGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CAA 90 bp ATATGGCATAAATGTCTTTCAAGTTCCCAGAGAACTAACTCTAAGCCCATCTCACAATCTCTCAGTATCTaGCAGGAGCAGCAGCGTTTT +
Preference number: 5 (lower is better)
Translates to: IWHKCLSSSQRTNSKPISQSLSI*QEQQRF
Trigger: AAAACGCTGCTGCTCCTGCAAGATACTGAGAGATTG...TGAGATGGGCTTAGAGTTAGTTCTCTGGGAACTTGAAAGACATTTATGCCATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262109.8
CDS-3UTR CAA 90 bp ATACGCTGTGGTCTCATGCAGCACAGAGAACCTAGGGAAATTATCCTAATTAATTTATTCAACATACACTaGTTGATGCCCGGCTCTGTG +
Preference number: 5 (lower is better)
Translates to: IRCGLMQHREPREIILINLFNIH*LMPGSV
Trigger: CACAGAGCCGGGCATCAACAAGTGTATGTTGAATAA...ATTAATTAGGATAATTTCCCTAGGTTCTCTGTGCTGCATGAGACCACAGCGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CAA 90 bp TGTATGTGTGGAGCGCAGTCATGTTCTTTGTTACGCAACACAGTTTTCACCTTGAAGACAACATTCTTATaGCTTGGAGGTTTACTCGAG +
Preference number: 5 (lower is better)
Translates to: CMCGAQSCSLLRNTVFTLKTTFL*LGGLLE
Trigger: CTCGAGTAAACCTCCAAGCAATAAGAATGTTGTCTT...CAAGGTGAAAACTGTGTTGCGTAACAAAGAACATGACTGCGCTCCACACATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CAA 90 bp TCTTGGGCTCCCGGTCCACTGCTTAAAAAGTTACTATCACACAAAGTCGAAAGTTTTTATTTTTGCTTATaGTGGTGCCATCTGTGTGCT +
Preference number: 5 (lower is better)
Translates to: SWAPGPLLKKLLSHKVESFYFCL*WCHLCA
Trigger: AGCACACAGATGGCACCACAATAAGCAAAAATAAAA...ACTTTCGACTTTGTGTGATAGTAACTTTTTAAGCAGTGGACCGGGAGCCCAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000522706.5
CDS-3UTR CAA 90 bp ATTTTTATATCAAGCAGAGATGCAGGAAGCCTGTTTCTCTCTGGGACTCTATTCATATTTTCCAACTCATaGCTGTTTTGGTGGCGTGTA +
Preference number: 5 (lower is better)
Translates to: IFISSRDAGSLFLSGTLFIFSNS*LFWWRV
Trigger: TACACGCCACCAAAACAGCAATGAGTTGGAAAATAT...GAATAGAGTCCCAGAGAGAAACAGGCTTCCTGCATCTCTGCTTGATATAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS-3UTR CAA 90 bp ACACAGTTCCCTCCGAGAAGTGATGCTCTGCCGGGGAATAATTTTATTATGAATTTAATACAATGTTTATaGATCCACAGATGTGTGCCG +
Preference number: 5 (lower is better)
Translates to: TQFPPRSDALPGNNFIMNLIQCL*IHRCVP
Trigger: CGGCACACATCTGTGGATCAATAAACATTGTATTAA...ATTCATAATAAAATTATTCCCCGGCAGAGCATCACTTCTCGGAGGGAACTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS-3UTR CAA 90 bp CATAAATGTCTTTCAAGTTCCCAGAGAACTAACTCTAAGCCCATCTCACATTTGCTGTGTGCCTTTTCATaGGTAATTGTATCATCTTCC +
Preference number: 5 (lower is better)
Translates to: HKCLSSSQRTNSKPISHLLCAFS*VIVSSS
Trigger: GGAAGATGATACAATTACCAATGAAAAGGCACACAG...CAAATGTGAGATGGGCTTAGAGTTAGTTCTCTGGGAACTTGAAAGACATTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262109.8
CDS-3UTR CAA 90 bp ATATGGCATAAATGTCTTTCAAGTTCCCAGAGAACTAACTCTAAGCCCATCTCATTTTATTTTTGCTTATaGTGGTGCCATCTGTGTGCT +
Preference number: 5 (lower is better)
Translates to: IWHKCLSSSQRTNSKPISFYFCL*WCHLCA
Trigger: AGCACACAGATGGCACCACAATAAGCAAAAATAAAA...TGAGATGGGCTTAGAGTTAGTTCTCTGGGAACTTGAAAGACATTTATGCCATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262109.8
CDS GCA 72 bp GACCCCAGGGACAGCCTGTGCTCGGGGGTCGCGCGTTaGGCTCCTCGCCGGGCTCCGCGCATCCCTGGCCGC +
Preference number: 6 (lower is better)
Translates to: DPRDSLCSGVAR*APRRAPRIPGR
Trigger: GCGGCCAGGGATGCGCGGAGCCCGGCGAGGAGCGCAACGCGCGACCCCCGAGCACAGGCTGTCCCTGGGGTC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518277.1
ENST00000633278.1
CDS TCA 72 bp ACCCTGCCGCGGACCTCAGACCACGGCGCGCGGTCCTaGGCTGAGCGCCGTGCCTTCCGGGTTCCGCCCTCC +
Preference number: 6 (lower is better)
Translates to: TLPRTSDHGARS*AERRAFRVPPS
Trigger: GGAGGGCGGAACCCGGAAGGCACGGCGCTCAGCTCAGGACCGCGCGCCGTGGTCTGAGGTCCGCGGCAGGGT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000632053.1
CDS GCA 72 bp AAACACGTGCTTCCTGTGCGCCGCCATGCGGGACCCTaGCGCGGACCTCAGACCACGGCGCGCGGTCCTGAG +
Preference number: 6 (lower is better)
Translates to: KHVLPVRRHAGP*RGPQTTARGPE
Trigger: CTCAGGACCGCGCGCCGTGGTCTGAGGTCCGCGGCAGGGTCCCGCATGGCGGCGCACAGGAAGCACGTGTTT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262109.8
CDS CCA 72 bp CCGGCCAACAGGGGACGTAGCCCTCAGGAGGCCCGCTaGCAGTGTAGAGCCGTCGGGCAGTCGGGGTCTCAG +
Preference number: 6 (lower is better)
Translates to: PANRGRSPQEAR*QCRAVGQSGSQ
Trigger: CTGAGACCCCGACTGCCCGACGGCTCTACACTGCCAGCGGGCCTCCTGAGGGCTACGTCCCCTGTTGGCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262109.8
ENST00000518277.1
ENST00000524138.5
CDS GCA 72 bp CCTTCTCCACAAACACGTGCTTCCTGTGCGCCGCCATaGGGGACCCTGCCGCGGACCTCAGACCACGGCGCG +
Preference number: 6 (lower is better)
Translates to: PSPQTRASCAPP*GTLPRTSDHGA
Trigger: CGCGCCGTGGTCTGAGGTCCGCGGCAGGGTCCCGCATGGCGGCGCACAGGAAGCACGTGTTTGTGGAGAAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262109.8
CDS GCA 72 bp CATGAGGATCCTGATCGTGCTTCCTGTGCGCCGCCATaGGGGACCCTGCCGCGGACCTCAGACCACGGCGCG +
Preference number: 6 (lower is better)
Translates to: HEDPDRASCAPP*GTLPRTSDHGA
Trigger: CGCGCCGTGGTCTGAGGTCCGCGGCAGGGTCCCGCATGGCGGCGCACAGGAAGCACGATCAGGATCCTCATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522706.5
CDS CCA 72 bp GGTCATGAGGATCCTGATCTTCTGTGTCATCCCCGCTaGAGGCGTTCTCGGGGCTCCCACAGCTGCTGGGCT +
Preference number: 6 (lower is better)
Translates to: GHEDPDLLCHPR*RRSRGSHSCWA
Trigger: AGCCCAGCAGCTGTGGGAGCCCCGAGAACGCCTCCAGCGGGGATGACACAGAAGATCAGGATCCTCATGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262109.8
ENST00000518277.1
CDS GCA 72 bp TCATGTGGTACAGGATGGACACGTCTGAGGGCAGCATaGTGTGTGACGCAAGGCGGTCCAGCAGCTCCTCAG +
Preference number: 6 (lower is better)
Translates to: SCGTGWTRLRAA*CVTQGGPAAPQ
Trigger: CTGAGGAGCTGCTGGACCGCCTTGCGTCACACAGCATGCTGCCCTCAGACGTGTCCATCCTGTACCACATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262109.8
ENST00000522706.5
ENST00000522893.1
ENST00000523053.1
ENST00000523415.5
CDS GCA 72 bp CCTGGAGGCTCCATCGGCTCTGCAGCTGCAAGGCTGTaGTTGGGGCTTGCTCTGGGCATTTTCTCTTCTGTG +
Preference number: 6 (lower is better)
Translates to: PGGSIGSAAARL*LGLALGIFSSV
Trigger: CACAGAAGAGAAAATGCCCAGAGCAAGCCCCAAGCACAGCCTTGCAGCTGCAGAGCCGATGGAGCCTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524138.5
CDS CCA 72 bp CCCACGCCTTCCCCTTCATTGCTGCTGTCCTCGGGCTaGTACATGAAACTGACACCAGCAGCCTTTGCTGCC +
Preference number: 6 (lower is better)
Translates to: PTPSPSLLLSSG*YMKLTPAAFAA
Trigger: GGCAGCAAAGGCTGCTGGTGTCAGTTTCATGTACCAGCCCGAGGACAGCAGCAATGAAGGGGAAGGCGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262109.8
ENST00000522706.5
CDS CCA 72 bp GTTTCTCAACCTGTGAGGCTGGTTTTTCTGCCTCTCTaGGCTCCACCAGGTCCTTTCCCCAGACCCTCACCC +
Preference number: 6 (lower is better)
Translates to: VSQPVRLVFLPL*APPGPFPRPSP
Trigger: GGGTGAGGGTCTGGGGAAAGGACCTGGTGGAGCCCAGAGAGGCAGAAAAACCAGCCTCACAGGTTGAGAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518895.1
CDS CAA 72 bp GGAGGCTCCATCGGCTCTGCAGCTGCAAGGCTGTGCTaGGGGCTTGCTCTGGGCATTTTCTCTTCTGTGTCA +
Preference number: 6 (lower is better)
Translates to: GGSIGSAAARLC*GLALGIFSSVS
Trigger: TGACACAGAAGAGAAAATGCCCAGAGCAAGCCCCAAGCACAGCCTTGCAGCTGCAGAGCCGATGGAGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524138.5
CDS TCA 72 bp GTCCAGCAGCTCCTCAGCGGCATCTGCGAGGGCAGCTaGAGCTGCATCTCTGGAGACACCTACATAAAGTCA +
Preference number: 6 (lower is better)
Translates to: VQQLLSGICEGS*SCISGDTYIKS
Trigger: TGACTTTATGTAGGTGTCTCCAGAGATGCAGCTTCAGCTGCCCTCGCAGATGCCGCTGAGGAGCTGCTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523053.1
CDS CCA 72 bp TTGCCCTGCGAGGATCTGGGCACGCCAGGTGATGAGTaGCATGTGCACGACAATGTACGGATGGAAAGAGTC +
Preference number: 6 (lower is better)
Translates to: LPCEDLGTPGDE*HVHDNVRMERV
Trigger: GACTCTTTCCATCCGTACATTGTCGTGCACATGCCACTCATCACCTGGCGTGCCCAGATCCTCGCAGGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523709.1
CDS CAA 72 bp CGGCCAGCGTCTGGGGTTCCCTCTTTCCTTGGCCACTaGGAACAGGAGGAAAAAGTCTCTGCAGCACCTTCT +
Preference number: 6 (lower is better)
Translates to: RPASGVPSFLGH*EQEEKVSAAPS
Trigger: AGAAGGTGCTGCAGAGACTTTTTCCTCCTGTTCCAAGTGGCCAAGGAAAGAGGGAACCCCAGACGCTGGCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262109.8
ENST00000518277.1
CDS CAA 72 bp CTCTTCCTTCTTGTGTGCCGTGTTCCCACACTGACCTaGGAGGGTCAGAGAGAGAGGGGTCCCATCCTTGCT +
Preference number: 6 (lower is better)
Translates to: LFLLVCRVPTLT*EGQRERGPILA
Trigger: AGCAAGGATGGGACCCCTCTCTCTCTGACCCTCCAAGGTCAGTGTGGGAACACGGCACACAAGAAGGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524138.5
CDS TCA 72 bp GTCCAGCAGCTCCTCAGCGGCATCTGCGAGGGCAGCTaGAGCTGCATCTCTGGAGACACCGTCATAAAAATA +
Preference number: 6 (lower is better)
Translates to: VQQLLSGICEGS*SCISGDTVIKI
Trigger: TATTTTTATGACGGTGTCTCCAGAGATGCAGCTTCAGCTGCCCTCGCAGATGCCGCTGAGGAGCTGCTGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262109.8
ENST00000522706.5
ENST00000522893.1
ENST00000523415.5
CDS CCA 72 bp CTTGCAGGAGCAGCAGCGTTTTCATGTGGTACAGGATaGACACGTCTGAGGGCAGCATGCTGTGTGACGCAA +
Preference number: 6 (lower is better)
Translates to: LAGAAAFSCGTG*TRLRAACCVTQ
Trigger: TTGCGTCACACAGCATGCTGCCCTCAGACGTGTCCATCCTGTACCACATGAAAACGCTGCTGCTCCTGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262109.8
ENST00000522706.5
ENST00000522893.1
ENST00000523053.1
ENST00000523415.5
CDS CCA 72 bp CATGTAGCCACTGATGTGCTGTGTGACCTGTACCATTaGCCCAGGCTCTCTGAGCTTCAGACTTCCCACCTC +
Preference number: 6 (lower is better)
Translates to: HVATDVLCDLYH*PRLSELQTSHL
Trigger: GAGGTGGGAAGTCTGAAGCTCAGAGAGCCTGGGCCAATGGTACAGGTCACACAGCACATCAGTGGCTACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519909.1
CDS CCA 72 bp CATGTAGCCACTGATGTGCTGTGTGACCTGTACCATTaGCCCAGGCTCTCTGAGCTTCAGACTTCCCACCAG +
Preference number: 6 (lower is better)
Translates to: HVATDVLCDLYH*PRLSELQTSHQ
Trigger: CTGGTGGGAAGTCTGAAGCTCAGAGAGCCTGGGCCAATGGTACAGGTCACACAGCACATCAGTGGCTACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS CCA 72 bp GTCACTTTCTTTGGTGGATTTTGGACGGCCAGCGTCTaGGGTTCCCTCTTTCCTTGGCCACTTGGAACAGGA +
Preference number: 6 (lower is better)
Translates to: VTFFGGFWTASV*GSLFPWPLGTG
Trigger: TCCTGTTCCAAGTGGCCAAGGAAAGAGGGAACCCCAGACGCTGGCCGTCCAAAATCCACCAAAGAAAGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262109.8
ENST00000518277.1
CDS CCA 72 bp TCCATGTCATCGGTGTTGGTTCCTTGGGGATGGACCTaGAATACTTTTCCACGTTGGGTGCAGCTGGGACTG +
Preference number: 6 (lower is better)
Translates to: SMSSVLVPWGWT*NTFPRWVQLGL
Trigger: CAGTCCCAGCTGCACCCAACGTGGAAAAGTATTCCAGGTCCATCCCCAAGGAACCAACACCGATGACATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523709.1
CDS CAA 72 bp TTCCCCAGACCCTCACCCAACGCCCACACACAGGACTaGCAGATTCCTGAAGACAAGTGGCTGCAGATGTTT +
Preference number: 6 (lower is better)
Translates to: FPRPSPNAHTQD*QIPEDKWLQMF
Trigger: AAACATCTGCAGCCACTTGTCTTCAGGAATCTGCAAGTCCTGTGTGTGGGCGTTGGGTGAGGGTCTGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518895.1
CDS GCA 72 bp TCCAGCAGGACGGGGATGGACGTATCCCTAGACACCTaGATCAGTCAAGGTCATGGATATTGGGAAGACAGA +
Preference number: 6 (lower is better)
Translates to: SSRTGMDVSLDT*ISQGHGYWEDR
Trigger: TCTGTCTTCCCAATATCCATGACCTTGACTGATGCAGGTGTCTAGGGATACGTCCATCCCCGTCCTGCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519909.1
ENST00000523415.5
CDS GCA 72 bp AGATGTAGAGAATCACCTGGAATTATCACAGGGTGTTaGCCTGCGAGGATCTGGGCACGCCAGGTGATGAGT +
Preference number: 6 (lower is better)
Translates to: RCRESPGIITGC*PARIWARQVMS
Trigger: ACTCATCACCTGGCGTGCCCAGATCCTCGCAGGGCAACACCCTGTGATAATTCCAGGTGATTCTCTACATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523709.1
CDS CCA 72 bp CTCACTTTCTCAGAGGTCACTTTCTTTGGTGGATTTTaGACGGCCAGCGTCTGGGGTTCCCTCTTTCCTTGG +
Preference number: 6 (lower is better)
Translates to: LTFSEVTFFGGF*TASVWGSLFPW
Trigger: CCAAGGAAAGAGGGAACCCCAGACGCTGGCCGTCCAAAATCCACCAAAGAAAGTGACCTCTGAGAAAGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262109.8
ENST00000518277.1
CDS CAA 72 bp GCTCACTTTCTCAGAGGTCACTTTCTTTGGTGGATTTaGGACGGCCAGCGTCTGGGGTTCCCTCTTTCCTTG +
Preference number: 6 (lower is better)
Translates to: AHFLRGHFLWWI*DGQRLGFPLSL
Trigger: CAAGGAAAGAGGGAACCCCAGACGCTGGCCGTCCAAAATCCACCAAAGAAAGTGACCTCTGAGAAAGTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262109.8
ENST00000518277.1
CDS CAA 90 bp ATGTTTCTGGCTCACTTTCTCAGAGGTCACTTTCTTTGGTGGATTTaGGACGGCCAGCGTCTGGGGTTCCCTCTTTCCTTGGCCACTTGG +
Preference number: 6 (lower is better)
Translates to: MFLAHFLRGHFLWWI*DGQRLGFPLSLATW
Trigger: CCAAGTGGCCAAGGAAAGAGGGAACCCCAGACGCTGGCCGTCCAAAATCCACCAAAGAAAGTGACCTCTGAGAAAGTGAGCCAGAAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262109.8
ENST00000518277.1
CDS CAA 90 bp GATGGACGTATCCCTAGACACCTGCATCAGTCAAGGTCATGGATATaGGGAAGACAGACAGCAGCAGACCCAGGTCTGAGCTCACATGTA +
Preference number: 6 (lower is better)
Translates to: DGRIPRHLHQSRSWI*GRQTAADPGLSSHV
Trigger: TACATGTGAGCTCAGACCTGGGTCTGCTGCTGTCTGTCTTCCCAATATCCATGACCTTGACTGATGCAGGTGTCTAGGGATACGTCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519909.1
ENST00000523415.5
CDS GCA 72 bp GGGCTGGTACATGAAACTGACACCAGCAGCCTTTGCTaGCAAGCCGGCTGCTTTCTTCCTTTTAATTTGCTG +
Preference number: 6 (lower is better)
Translates to: GLVHETDTSSLC*QAGCFLPFNLL
Trigger: CAGCAAATTAAAAGGAAGAAAGCAGCCGGCTTGGCAGCAAAGGCTGCTGGTGTCAGTTTCATGTACCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262109.8
ENST00000522706.5
ENST00000524138.5
CDS GCA 72 bp CTCTCTGAGCTTCAGACTTCCCACCAGGAGGCATCGTaGAATGTTCTGGGAACATTTCCAGAGCATGCTTCA +
Preference number: 6 (lower is better)
Translates to: LSELQTSHQEAS*NVLGTFPEHAS
Trigger: TGAAGCATGCTCTGGAAATGTTCCCAGAACATTGCACGATGCCTCCTGGTGGGAAGTCTGAAGCTCAGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523415.5
CDS TCA 72 bp GAATCAGAACAGAGCTCAGCACAAAATACCACTGCATaGACGACTGTGGAAACCTGGCCCGTCTACACCTCT +
Preference number: 6 (lower is better)
Translates to: ESEQSSAQNTTA*TTVETWPVYTS
Trigger: AGAGGTGTAGACGGGCCAGGTTTCCACAGTCGTTCATGCAGTGGTATTTTGTGCTGAGCTCTGTTCTGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523053.1
CDS GCA 72 bp GGCATCGTGCAATGTTCTGGGAACATTTCCAGAGCATaGTTCAATCTCTCAGTATCTTGCAGGAGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: GIVQCSGNISRA*FNLSVSCRSSS
Trigger: GCTGCTGCTCCTGCAAGATACTGAGAGATTGAAGCATGCTCTGGAAATGTTCCCAGAACATTGCACGATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262109.8
ENST00000522706.5
ENST00000522893.1
ENST00000523053.1
ENST00000523415.5
CDS GCA 72 bp GAGAGAATCAGAACAGAGCTCAGCACAAAATACCACTaGATGAACGACTGTGGAAACCTGGCCCGTCTACAC +
Preference number: 6 (lower is better)
Translates to: ERIRTELSTKYH*MNDCGNLARLH
Trigger: GTGTAGACGGGCCAGGTTTCCACAGTCGTTCATGCAGTGGTATTTTGTGCTGAGCTCTGTTCTGATTCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523053.1
CDS CCA 72 bp AACAGGTGTTTCCCATCCTGGCTTTCTGGTTACTCCTaGCATGACTGTTGGTCTGCCCCAAGCGTCATAAAA +
Preference number: 6 (lower is better)
Translates to: NRCFPSWLSGYS*HDCWSAPSVIK
Trigger: TTTTATGACGCTTGGGGCAGACCAACAGTCATGCCAGGAGTAACCAGAAAGCCAGGATGGGAAACACCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518895.1
CDS CCA 72 bp AAGATTCCTGAGTCCATGTCATCGGTGTTGGTTCCTTaGGGATGGACCTGGAATACTTTTCCACGTTGGGTG +
Preference number: 6 (lower is better)
Translates to: KIPESMSSVLVP*GWTWNTFPRWV
Trigger: CACCCAACGTGGAAAAGTATTCCAGGTCCATCCCCAAGGAACCAACACCGATGACATGGACTCAGGAATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523709.1
CDS CAA 90 bp AGAGTCCACGTAGGTTATAAGATTCCTGAGTCCATGTCATCGGTGTaGGTTCCTTGGGGATGGACCTGGAATACTTTTCCACGTTGGGTG +
Preference number: 6 (lower is better)
Translates to: RVHVGYKIPESMSSV*VPWGWTWNTFPRWV
Trigger: CACCCAACGTGGAAAAGTATTCCAGGTCCATCCCCAAGGAACCAACACCGATGACATGGACTCAGGAATCTTATAACCTACGTGGACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523709.1
CDS GCA 72 bp ACACACAGGACTTGCAGATTCCTGAAGACAAGTGGCTaGAGATGTTTCCATGATAATCTCCCCGTGAGGGTT +
Preference number: 6 (lower is better)
Translates to: THRTCRFLKTSG*RCFHDNLPVRV
Trigger: AACCCTCACGGGGAGATTATCATGGAAACATCTGCAGCCACTTGTCTTCAGGAATCTGCAAGTCCTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518895.1
CDS CCA 72 bp TCAGAGCCAGTGTCTGTCAAAGGCTCAGCATGTTTCTaGCTCACTTTCTCAGAGGTCACTTTCTTTGGTGGA +
Preference number: 6 (lower is better)
Translates to: SEPVSVKGSACF*LTFSEVTFFGG
Trigger: TCCACCAAAGAAAGTGACCTCTGAGAAAGTGAGCCAGAAACATGCTGAGCCTTTGACAGACACTGGCTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262109.8
ENST00000518277.1
ENST00000524138.5
CDS CCA 72 bp CCATCCTGGCTTTCTGGTTACTCCTGGCATGACTGTTaGTCTGCCCCAAGCGTCATAAAAATACATTTCCTG +
Preference number: 6 (lower is better)
Translates to: PSWLSGYSWHDC*SAPSVIKIHFL
Trigger: CAGGAAATGTATTTTTATGACGCTTGGGGCAGACCAACAGTCATGCCAGGAGTAACCAGAAAGCCAGGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518895.1
CDS CAA 90 bp ATGTTCTGGGAACATTTCCAGAGCATGCTTCAATCTCTCAGTATCTaGCAGGAGCAGCAGCGTTTTCATGTGGTACAGGATGGACACGTC +
Preference number: 6 (lower is better)
Translates to: MFWEHFQSMLQSLSI*QEQQRFHVVQDGHV
Trigger: GACGTGTCCATCCTGTACCACATGAAAACGCTGCTGCTCCTGCAAGATACTGAGAGATTGAAGCATGCTCTGGAAATGTTCCCAGAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262109.8
ENST00000522706.5
ENST00000522893.1
ENST00000523053.1
ENST00000523415.5
CDS CAA 72 bp GAGGCAAACCTCGATGAGAGTATCTTAAGCAGGACCTaGAATAAATCGTACGGTACTTACCAGGAGGCATCG +
Preference number: 6 (lower is better)
Translates to: EANLDESILSRT*NKSYGTYQEAS
Trigger: CGATGCCTCCTGGTAAGTACCGTACGATTTATTCAAGGTCCTGCTTAAGATACTCTCATCGAGGTTTGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS TCA 72 bp CCTGGAATACTTTTCCACGTTGGGTGCAGCTGGGACTaGAGATCTTCCAATTTGATTTCGACAAGAGCCAAT +
Preference number: 6 (lower is better)
Translates to: PGILFHVGCSWD*RSSNLISTRAN
Trigger: ATTGGCTCTTGTCGAAATCAAATTGGAAGATCTTCAGTCCCAGCTGCACCCAACGTGGAAAAGTATTCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523709.1
CDS TCA 72 bp ACCTACGCTTCCACACAGAATGACATATCTGGGAGATaGGAAGCTACCAGAAGAGAGAATCAGAACAGAGCT +
Preference number: 6 (lower is better)
Translates to: TYASTQNDISGR*EATRRENQNRA
Trigger: AGCTCTGTTCTGATTCTCTCTTCTGGTAGCTTCTCATCTCCCAGATATGTCATTCTGTGTGGAAGCGTAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523053.1
CDS CAA 72 bp GTAGGTTATAAGATTCCTGAGTCCATGTCATCGGTGTaGGTTCCTTGGGGATGGACCTGGAATACTTTTCCA +
Preference number: 6 (lower is better)
Translates to: VGYKIPESMSSV*VPWGWTWNTFP
Trigger: TGGAAAAGTATTCCAGGTCCATCCCCAAGGAACCAACACCGATGACATGGACTCAGGAATCTTATAACCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523709.1
CDS CAA 90 bp AGTCTTTCAGAGGCAAACCTCGATGAGAGTATCTTAAGCAGGACCTaGAATAAATCGTACGGTACTTACCAGGAGGCATCGTGCAATGTT +
Preference number: 6 (lower is better)
Translates to: SLSEANLDESILSRT*NKSYGTYQEASCNV
Trigger: AACATTGCACGATGCCTCCTGGTAAGTACCGTACGATTTATTCAAGGTCCTGCTTAAGATACTCTCATCGAGGTTTGCCTCTGAAAGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS GCA 72 bp TTGAATAAATCGTACGGTACTTACCAGGAGGCATCGTaGAATGTTCTGGGAACATTTCCAGAGCATGCTTCA +
Preference number: 6 (lower is better)
Translates to: LNKSYGTYQEAS*NVLGTFPEHAS
Trigger: TGAAGCATGCTCTGGAAATGTTCCCAGAACATTGCACGATGCCTCCTGGTAAGTACCGTACGATTTATTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS CCA 72 bp TGCAGTGTCATATTTTCCAACTCATTGCTGTTTTGGTaGCGTGTAAGTCTTTCAGAGGCAAACCTCGATGAG +
Preference number: 6 (lower is better)
Translates to: CSVIFSNSLLFW*RVSLSEANLDE
Trigger: CTCATCGAGGTTTGCCTCTGAAAGACTTACACGCCACCAAAACAGCAATGAGTTGGAAAATATGACACTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS CAA 72 bp CCATGCCATATGTGCAGTGTCATATTTTCCAACTCATaGCTGTTTTGGTGGCGTGTAAGTCTTTCAGAGGCA +
Preference number: 6 (lower is better)
Translates to: PCHMCSVIFSNS*LFWWRVSLSEA
Trigger: TGCCTCTGAAAGACTTACACGCCACCAAAACAGCAATGAGTTGGAAAATATGACACTGCACATATGGCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS CAA 90 bp TCTATTCTCCCATGCCATATGTGCAGTGTCATATTTTCCAACTCATaGCTGTTTTGGTGGCGTGTAAGTCTTTCAGAGGCAAACCTCGAT +
Preference number: 6 (lower is better)
Translates to: SILPCHMCSVIFSNS*LFWWRVSLSEANLD
Trigger: ATCGAGGTTTGCCTCTGAAAGACTTACACGCCACCAAAACAGCAATGAGTTGGAAAATATGACACTGCACATATGGCATGGGAGAATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522893.1
CDS CCA 72 bp ATGTGCAGTGTCATATTTTCCAACTCATTGCTGTTTTaGTGGCGTGTAAGTCTTTCAGAGGCAAACCTCGAT +
Preference number: 6 (lower is better)
Translates to: MCSVIFSNSLLF*WRVSLSEANLD
Trigger: ATCGAGGTTTGCCTCTGAAAGACTTACACGCCACCAAAACAGCAATGAGTTGGAAAATATGACACTGCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522893.1