RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ERICD (Homo sapiens)

Ensembl gene IDs: ENSG00000280303

Ensembl transcript IDs: ENST00000623655.2

Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp GACCCAGAGTCGGCTGAGTCACCATCCGGGTGTGGGACGTGGGTCTaGGGGACAGAGCAGCAAGGGCTGGAGACATGTCACAGCAAGCAC +
Preference number: 5 (lower is better)
Translates to: DPESAESPSGCGTWV*GTEQQGLETCHSKH
Trigger: GTGCTTGCTGTGACATGTCTCCAGCCCTTGCTGCTCTGTCCCCCAGACCCACGTCCCACACCCGGATGGTGACTCAGCCGACTCTGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623655.2
CDS CCA 90 bp CCAGAAGACCCAGAGTCGGCTGAGTCACCATCCGGGTGTGGGACGTaGGTCTGGGGGACAGAGCAGCAAGGGCTGGAGACATGTCACAGC +
Preference number: 5 (lower is better)
Translates to: PEDPESAESPSGCGT*VWGTEQQGLETCHS
Trigger: GCTGTGACATGTCTCCAGCCCTTGCTGCTCTGTCCCCCAGACCCACGTCCCACACCCGGATGGTGACTCAGCCGACTCTGGGTCTTCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623655.2
CDS TCA 90 bp AGTGATGACAGAGCCTTCTGGGCCTTTGCTGAGGCGTGCAGTCGCTaGCAGCAGGGCAGTTGGGCCTCAGGGATTTCGGGCCAAAACGAG +
Preference number: 5 (lower is better)
Translates to: SDDRAFWAFAEACSR*QQGSWASGISGQNE
Trigger: CTCGTTTTGGCCCGAAATCCCTGAGGCCCAACTGCCCTGCTGTCAGCGACTGCACGCCTCAGCAAAGGCCCAGAAGGCTCTGTCATCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623655.2
CDS GCA 90 bp TTCTCCGCCCGGAACAGGGCCTTGCACCCATATGCAGACAGCCGATaGCACGGGGTGAAGGAATGCTCCGGGAAATCTGGGAAAAGGCGA +
Preference number: 5 (lower is better)
Translates to: FSARNRALHPYADSR*HGVKECSGKSGKRR
Trigger: TCGCCTTTTCCCAGATTTCCCGGAGCATTCCTTCACCCCGTGGCATCGGCTGTCTGCATATGGGTGCAAGGCCCTGTTCCGGGCGGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623655.2
CDS GCA 90 bp GGCTGTCCTCCGAGACTGCAGAGAACTAGTGACCACCCTGCTGGCTaGGGAGCTCCTGTCAGTCAGAACTCCTGTTTATTCTCCGCCCGG +
Preference number: 5 (lower is better)
Translates to: GCPPRLQRTSDHPAG*GAPVSQNSCLFSAR
Trigger: CCGGGCGGAGAATAAACAGGAGTTCTGACTGACAGGAGCTCCGCAGCCAGCAGGGTGGTCACTAGTTCTCTGCAGTCTCGGAGGACAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623655.2
CDS TCA 90 bp GGAACAGGGCCTTGCACCCATATGCAGACAGCCGATGCCACGGGGTaGAGGAATGCTCCGGGAAATCTGGGAAAAGGCGACCAGGCACTT +
Preference number: 5 (lower is better)
Translates to: GTGPCTHMQTADATG*RNAPGNLGKGDQAL
Trigger: AAGTGCCTGGTCGCCTTTTCCCAGATTTCCCGGAGCATTCCTTCACCCCGTGGCATCGGCTGTCTGCATATGGGTGCAAGGCCCTGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623655.2
CDS TCA 90 bp CAACAAAGTTCCCCAACACAGCGCTCAAAGGAGCTGAAGGCGGGCTaGGGGCAGCCAGTGATGACAGAGCCTTCTGGGCCTTTGCTGAGG +
Preference number: 5 (lower is better)
Translates to: QQSSPTQRSKELKAG*GQPVMTEPSGPLLR
Trigger: CCTCAGCAAAGGCCCAGAAGGCTCTGTCATCACTGGCTGCCCTCAGCCCGCCTTCAGCTCCTTTGAGCGCTGTGTTGGGGAACTTTGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623655.2
CDS TCA 90 bp CCCTCACCCCTTCTTTCTCTCTCATGGGGAGCTGGTGCTTTAGACTaGGTGCACCCAGTGTGCAGAGCTGCAGGCCAGGCTGCTGCAAAT +
Preference number: 5 (lower is better)
Translates to: PSPLLSLSWGAGALD*VHPVCRAAGQAAAN
Trigger: ATTTGCAGCAGCCTGGCCTGCAGCTCTGCACACTGGGTGCACTCAGTCTAAAGCACCAGCTCCCCATGAGAGAGAAAGAAGGGGTGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623655.2
CDS CCA 90 bp GCAGGAGAGGTAACAGGCAGAGGGGACTGCAGTTCTCAGCTCCGTTaGGTGGTGGATCTGTTAGCCATGCTGAGTGAGGGACACCAGAAG +
Preference number: 5 (lower is better)
Translates to: AGEVTGRGDCSSQLR*VVDLLAMLSEGHQK
Trigger: CTTCTGGTGTCCCTCACTCAGCATGGCTAACAGATCCACCACCCAACGGAGCTGAGAACTGCAGTCCCCTCTGCCTGTTACCTCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623655.2
CDS TCA 90 bp CCCTCCGCCAGCAGAGGGCCACGGTGTCCGCCATCCAAAGAGAAGTaGCACAATGAAGCCCTCAGAGACATTATCTTGCCTTCTGGAACG +
Preference number: 5 (lower is better)
Translates to: PSASRGPRCPPSKEK*HNEALRDIILPSGT
Trigger: CGTTCCAGAAGGCAAGATAATGTCTCTGAGGGCTTCATTGTGTCACTTCTCTTTGGATGGCGGACACCGTGGCCCTCTGCTGGCGGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623655.2
CDS CCA 90 bp TGCAGACAGCCGATGCCACGGGGTGAAGGAATGCTCCGGGAAATCTaGGAAAAGGCGACCAGGCACTTTAGATTGTGGGTCAACCTCTGC +
Preference number: 5 (lower is better)
Translates to: CRQPMPRGEGMLREI*EKATRHFRLWVNLC
Trigger: GCAGAGGTTGACCCACAATCTAAAGTGCCTGGTCGCCTTTTCCCAGATTTCCCGGAGCATTCCTTCACCCCGTGGCATCGGCTGTCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623655.2
CDS GCA 90 bp GCCTTGCACCCATATGCAGACAGCCGATGCCACGGGGTGAAGGAATaGTCCGGGAAATCTGGGAAAAGGCGACCAGGCACTTTAGATTGT +
Preference number: 5 (lower is better)
Translates to: ALHPYADSRCHGVKE*SGKSGKRRPGTLDC
Trigger: ACAATCTAAAGTGCCTGGTCGCCTTTTCCCAGATTTCCCGGAGCATTCCTTCACCCCGTGGCATCGGCTGTCTGCATATGGGTGCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623655.2
CDS GCA 90 bp AGCACACTGTTTCTCCATCCTGCTCTCCGTGGGTATTCAGTGCCATaGAGTCCAAGCGGTGATGAAGAATGCCATGCACACTCCTACCCA +
Preference number: 5 (lower is better)
Translates to: STLFLHPALRGYSVP*SPSGDEECHAHSYP
Trigger: TGGGTAGGAGTGTGCATGGCATTCTTCATCACCGCTTGGACTGCATGGCACTGAATACCCACGGAGAGCAGGATGGAGAAACAGTGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623655.2
CDS TCA 90 bp AGTGTGCAGAGCTGCAGGCCAGGCTGCTGCAAATGTCCCTGGCTGTaGTTAGAGCCCACGGTCTTATCAAAGCATCAGGATCCTAAAACA +
Preference number: 5 (lower is better)
Translates to: SVQSCRPGCCKCPWL*LEPTVLSKHQDPKT
Trigger: TGTTTTAGGATCCTGATGCTTTGATAAGACCGTGGGCTCTAATCACAGCCAGGGACATTTGCAGCAGCCTGGCCTGCAGCTCTGCACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623655.2
CDS TCA 90 bp CAGCAGAGGGCCACGGTGTCCGCCATCCAAAGAGAAGTGACACAATaGAGCCCTCAGAGACATTATCTTGCCTTCTGGAACGAAATCCTT +
Preference number: 5 (lower is better)
Translates to: QQRATVSAIQREVTQ*SPQRHYLAFWNEIL
Trigger: AAGGATTTCGTTCCAGAAGGCAAGATAATGTCTCTGAGGGCTTCATTGTGTCACTTCTCTTTGGATGGCGGACACCGTGGCCCTCTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623655.2
CDS GCA 90 bp ATCTGGGAAAAGGCGACCAGGCACTTTAGATTGTGGGTCAACCTCTaGCTTCTAATCCTCCATCACTTAGGGGAGAAAGGAGGTAGCCAC +
Preference number: 5 (lower is better)
Translates to: IWEKATRHFRLWVNL*LLILHHLGEKGGSH
Trigger: GTGGCTACCTCCTTTCTCCCCTAAGTGATGGAGGATTAGAAGGCAGAGGTTGACCCACAATCTAAAGTGCCTGGTCGCCTTTTCCCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623655.2
CDS GCA 90 bp CTCCGTGGGTATTCAGTGCCATGCAGTCCAAGCGGTGATGAAGAATaGCATGCACACTCCTACCCAGGTTTCCTGGTGTTCATTACTACA +
Preference number: 5 (lower is better)
Translates to: LRGYSVPCSPSGDEE*HAHSYPGFLVFITT
Trigger: TGTAGTAATGAACACCAGGAAACCTGGGTAGGAGTGTGCATGGCATTCTTCATCACCGCTTGGACTGCATGGCACTGAATACCCACGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623655.2
CDS CCA 90 bp ATGCTCCGGGAAATCTGGGAAAAGGCGACCAGGCACTTTAGATTGTaGGTCAACCTCTGCCTTCTAATCCTCCATCACTTAGGGGAGAAA +
Preference number: 5 (lower is better)
Translates to: MLREIWEKATRHFRL*VNLCLLILHHLGEK
Trigger: TTTCTCCCCTAAGTGATGGAGGATTAGAAGGCAGAGGTTGACCCACAATCTAAAGTGCCTGGTCGCCTTTTCCCAGATTTCCCGGAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623655.2
CDS GCA 90 bp AATGATTTATTCCATTGCCTGCATTTTAGTCTTGAAGAAACAAAGTaGCCCCAAAGCCGAGGGCTTTGTCAGCCCTGTGGCCTCAGGAGC +
Preference number: 5 (lower is better)
Translates to: NDLFHCLHFSLEETK*PQSRGLCQPCGLRS
Trigger: GCTCCTGAGGCCACAGGGCTGACAAAGCCCTCGGCTTTGGGGGCACTTTGTTTCTTCAAGACTAAAATGCAGGCAATGGAATAAATCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623655.2
CDS CCA 90 bp CAAGCGGTGATGAAGAATGCCATGCACACTCCTACCCAGGTTTCCTaGTGTTCATTACTACACATTTCAGGAGCACGTTTTGTATCGGCA +
Preference number: 5 (lower is better)
Translates to: QAVMKNAMHTPTQVS*CSLLHISGARFVSA
Trigger: TGCCGATACAAAACGTGCTCCTGAAATGTGTAGTAATGAACACCAGGAAACCTGGGTAGGAGTGTGCATGGCATTCTTCATCACCGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623655.2
CDS GCA 90 bp CATCCAAAGAGAAGTGACACAATGAAGCCCTCAGAGACATTATCTTaGCTTCTGGAACGAAATCCTTGCAACAAAGTTCCCCAACACAGC +
Preference number: 5 (lower is better)
Translates to: HPKRSDTMKPSETLS*LLERNPCNKVPQHS
Trigger: GCTGTGTTGGGGAACTTTGTTGCAAGGATTTCGTTCCAGAAGGCAAGATAATGTCTCTGAGGGCTTCATTGTGTCACTTCTCTTTGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623655.2
CDS TCA 72 bp GGGAGAAGCACTGGGTCCAGAAGACCCAGAGTCGGCTaGGTCACCATCCGGGTGTGGGACGTGGGTCTGGGG +
Preference number: 6 (lower is better)
Translates to: GRSTGSRRPRVG*VTIRVWDVGLG
Trigger: CCCCAGACCCACGTCCCACACCCGGATGGTGACTCAGCCGACTCTGGGTCTTCTGGACCCAGTGCTTCTCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623655.2
CDS CCA 72 bp TCGGCTGAGTCACCATCCGGGTGTGGGACGTGGGTCTaGGGGACAGAGCAGCAAGGGCTGGAGACATGTCAC +
Preference number: 6 (lower is better)
Translates to: SAESPSGCGTWV*GTEQQGLETCH
Trigger: GTGACATGTCTCCAGCCCTTGCTGCTCTGTCCCCCAGACCCACGTCCCACACCCGGATGGTGACTCAGCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623655.2
CDS CCA 72 bp GTGGGACGTGGGTCTGGGGGACAGAGCAGCAAGGGCTaGAGACATGTCACAGCAAGCACCGAGACGCACAGT +
Preference number: 6 (lower is better)
Translates to: VGRGSGGQSSKG*RHVTASTETHS
Trigger: ACTGTGCGTCTCGGTGCTTGCTGTGACATGTCTCCAGCCCTTGCTGCTCTGTCCCCCAGACCCACGTCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623655.2
CDS GCA 72 bp CGGAACAGGGCCTTGCACCCATATGCAGACAGCCGATaGCACGGGGTGAAGGAATGCTCCGGGAAATCTGGG +
Preference number: 6 (lower is better)
Translates to: RNRALHPYADSR*HGVKECSGKSG
Trigger: CCCAGATTTCCCGGAGCATTCCTTCACCCCGTGGCATCGGCTGTCTGCATATGGGTGCAAGGCCCTGTTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623655.2
CDS CAA 72 bp CAGAACTCCTGTTTATTCTCCGCCCGGAACAGGGCCTaGCACCCATATGCAGACAGCCGATGCCACGGGGTG +
Preference number: 6 (lower is better)
Translates to: QNSCLFSARNRA*HPYADSRCHGV
Trigger: CACCCCGTGGCATCGGCTGTCTGCATATGGGTGCAAGGCCCTGTTCCGGGCGGAGAATAAACAGGAGTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623655.2
CDS CAA 90 bp CCTGTCAGTCAGAACTCCTGTTTATTCTCCGCCCGGAACAGGGCCTaGCACCCATATGCAGACAGCCGATGCCACGGGGTGAAGGAATGC +
Preference number: 6 (lower is better)
Translates to: PVSQNSCLFSARNRA*HPYADSRCHGVKEC
Trigger: GCATTCCTTCACCCCGTGGCATCGGCTGTCTGCATATGGGTGCAAGGCCCTGTTCCGGGCGGAGAATAAACAGGAGTTCTGACTGACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623655.2
CDS TCA 72 bp CCTTGCACCCATATGCAGACAGCCGATGCCACGGGGTaGAGGAATGCTCCGGGAAATCTGGGAAAAGGCGAC +
Preference number: 6 (lower is better)
Translates to: PCTHMQTADATG*RNAPGNLGKGD
Trigger: GTCGCCTTTTCCCAGATTTCCCGGAGCATTCCTTCACCCCGTGGCATCGGCTGTCTGCATATGGGTGCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623655.2
CDS GCA 72 bp CCATATGCAGACAGCCGATGCCACGGGGTGAAGGAATaGTCCGGGAAATCTGGGAAAAGGCGACCAGGCACT +
Preference number: 6 (lower is better)
Translates to: PYADSRCHGVKE*SGKSGKRRPGT
Trigger: AGTGCCTGGTCGCCTTTTCCCAGATTTCCCGGAGCATTCCTTCACCCCGTGGCATCGGCTGTCTGCATATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623655.2
CDS TCA 72 bp CTTCTTTCTCTCTCATGGGGAGCTGGTGCTTTAGACTaGGTGCACCCAGTGTGCAGAGCTGCAGGCCAGGCT +
Preference number: 6 (lower is better)
Translates to: LLSLSWGAGALD*VHPVCRAAGQA
Trigger: AGCCTGGCCTGCAGCTCTGCACACTGGGTGCACTCAGTCTAAAGCACCAGCTCCCCATGAGAGAGAAAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623655.2
CDS CCA 72 bp CCGATGCCACGGGGTGAAGGAATGCTCCGGGAAATCTaGGAAAAGGCGACCAGGCACTTTAGATTGTGGGTC +
Preference number: 6 (lower is better)
Translates to: PMPRGEGMLREI*EKATRHFRLWV
Trigger: GACCCACAATCTAAAGTGCCTGGTCGCCTTTTCCCAGATTTCCCGGAGCATTCCTTCACCCCGTGGCATCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623655.2
CDS CAA 72 bp AAGTGCAGTTTAAGGGATGGCTGCCAAAGGGCACCATaGCAGGAAGGAACAGGCCTGGCACCCCCAAATCCC +
Preference number: 6 (lower is better)
Translates to: KCSLRDGCQRAP*QEGTGLAPPNP
Trigger: GGGATTTGGGGGTGCCAGGCCTGTTCCTTCCTGCAATGGTGCCCTTTGGCAGCCATCCCTTAAACTGCACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623655.2
CDS GCA 72 bp CCGAGACTGCAGAGAACTAGTGACCACCCTGCTGGCTaGGGAGCTCCTGTCAGTCAGAACTCCTGTTTATTC +
Preference number: 6 (lower is better)
Translates to: PRLQRTSDHPAG*GAPVSQNSCLF
Trigger: GAATAAACAGGAGTTCTGACTGACAGGAGCTCCGCAGCCAGCAGGGTGGTCACTAGTTCTCTGCAGTCTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623655.2
CDS TCA 72 bp AGCAGAGGGCCACGGTGTCCGCCATCCAAAGAGAAGTaGCACAATGAAGCCCTCAGAGACATTATCTTGCCT +
Preference number: 6 (lower is better)
Translates to: SRGPRCPPSKEK*HNEALRDIILP
Trigger: AGGCAAGATAATGTCTCTGAGGGCTTCATTGTGTCACTTCTCTTTGGATGGCGGACACCGTGGCCCTCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623655.2
CDS GCA 72 bp TTTCTCCATCCTGCTCTCCGTGGGTATTCAGTGCCATaGAGTCCAAGCGGTGATGAAGAATGCCATGCACAC +
Preference number: 6 (lower is better)
Translates to: FLHPALRGYSVP*SPSGDEECHAH
Trigger: GTGTGCATGGCATTCTTCATCACCGCTTGGACTGCATGGCACTGAATACCCACGGAGAGCAGGATGGAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623655.2
CDS CAA 90 bp GGAATGCTCCGGGAAATCTGGGAAAAGGCGACCAGGCACTTTAGATaGTGGGTCAACCTCTGCCTTCTAATCCTCCATCACTTAGGGGAG +
Preference number: 6 (lower is better)
Translates to: GMLREIWEKATRHFR*WVNLCLLILHHLGE
Trigger: CTCCCCTAAGTGATGGAGGATTAGAAGGCAGAGGTTGACCCACAATCTAAAGTGCCTGGTCGCCTTTTCCCAGATTTCCCGGAGCATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623655.2
CDS GCA 72 bp TATTCAGTGCCATGCAGTCCAAGCGGTGATGAAGAATaGCATGCACACTCCTACCCAGGTTTCCTGGTGTTC +
Preference number: 6 (lower is better)
Translates to: YSVPCSPSGDEE*HAHSYPGFLVF
Trigger: GAACACCAGGAAACCTGGGTAGGAGTGTGCATGGCATTCTTCATCACCGCTTGGACTGCATGGCACTGAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623655.2
CDS GCA 72 bp TTCCATTGCCTGCATTTTAGTCTTGAAGAAACAAAGTaGCCCCAAAGCCGAGGGCTTTGTCAGCCCTGTGGC +
Preference number: 6 (lower is better)
Translates to: FHCLHFSLEETK*PQSRGLCQPCG
Trigger: GCCACAGGGCTGACAAAGCCCTCGGCTTTGGGGGCACTTTGTTTCTTCAAGACTAAAATGCAGGCAATGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623655.2
CDS CAA 72 bp CGGGAAATCTGGGAAAAGGCGACCAGGCACTTTAGATaGTGGGTCAACCTCTGCCTTCTAATCCTCCATCAC +
Preference number: 6 (lower is better)
Translates to: REIWEKATRHFR*WVNLCLLILHH
Trigger: GTGATGGAGGATTAGAAGGCAGAGGTTGACCCACAATCTAAAGTGCCTGGTCGCCTTTTCCCAGATTTCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623655.2
CDS CAA 90 bp AGGAGCACGTTTTGTATCGGCAACTTGGTGAAGACTGATGTCCTTTaGAGTTTTCGGAGGAAGTGCTGGTTCTCCTGCCCTTCTTCAGGG +
Preference number: 6 (lower is better)
Translates to: RSTFCIGNLVKTDVL*SFRRKCWFSCPSSG
Trigger: CCCTGAAGAAGGGCAGGAGAACCAGCACTTCCTCCGAAAACTCAAAAGGACATCAGTCTTCACCAAGTTGCCGATACAAAACGTGCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623655.2
CDS CAA 90 bp AATGAAGCCCTCAGAGACATTATCTTGCCTTCTGGAACGAAATCCTaGCAACAAAGTTCCCCAACACAGCGCTCAAAGGAGCTGAAGGCG +
Preference number: 6 (lower is better)
Translates to: NEALRDIILPSGTKS*QQSSPTQRSKELKA
Trigger: CGCCTTCAGCTCCTTTGAGCGCTGTGTTGGGGAACTTTGTTGCAAGGATTTCGTTCCAGAAGGCAAGATAATGTCTCTGAGGGCTTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623655.2
CDS GCA 72 bp TCAGAGACATTATCTTGCCTTCTGGAACGAAATCCTTaGAACAAAGTTCCCCAACACAGCGCTCAAAGGAGC +
Preference number: 6 (lower is better)
Translates to: SETLSCLLERNP*NKVPQHSAQRS
Trigger: GCTCCTTTGAGCGCTGTGTTGGGGAACTTTGTTGCAAGGATTTCGTTCCAGAAGGCAAGATAATGTCTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623655.2
CDS CAA 72 bp TTTTGTATCGGCAACTTGGTGAAGACTGATGTCCTTTaGAGTTTTCGGAGGAAGTGCTGGTTCTCCTGCCCT +
Preference number: 6 (lower is better)
Translates to: FCIGNLVKTDVL*SFRRKCWFSCP
Trigger: AGGGCAGGAGAACCAGCACTTCCTCCGAAAACTCAAAAGGACATCAGTCTTCACCAAGTTGCCGATACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623655.2
CDS CAA 72 bp CTCAGAGACATTATCTTGCCTTCTGGAACGAAATCCTaGCAACAAAGTTCCCCAACACAGCGCTCAAAGGAG +
Preference number: 6 (lower is better)
Translates to: LRDIILPSGTKS*QQSSPTQRSKE
Trigger: CTCCTTTGAGCGCTGTGTTGGGGAACTTTGTTGCAAGGATTTCGTTCCAGAAGGCAAGATAATGTCTCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623655.2
CDS CCA 72 bp ATGAAGAATGCCATGCACACTCCTACCCAGGTTTCCTaGTGTTCATTACTACACATTTCAGGAGCACGTTTT +
Preference number: 6 (lower is better)
Translates to: MKNAMHTPTQVS*CSLLHISGARF
Trigger: AAAACGTGCTCCTGAAATGTGTAGTAATGAACACCAGGAAACCTGGGTAGGAGTGTGCATGGCATTCTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623655.2
CDS CCA 72 bp AGAAAAGCATATAAAGTAAAAGTGCAGTTTAAGGGATaGCTGCCAAAGGGCACCATTGCAGGAAGGAACAGG +
Preference number: 6 (lower is better)
Translates to: RKAYKVKVQFKG*LPKGTIAGRNR
Trigger: CCTGTTCCTTCCTGCAATGGTGCCCTTTGGCAGCCATCCCTTAAACTGCACTTTTACTTTATATGCTTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623655.2