Pregenerated sensors for ERI3-IT1 (Homo sapiens)
Ensembl gene IDs: ENSG00000233602Ensembl transcript IDs: ENST00000414156.1
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TTTGCTTTCTTCCTCAGCTGCTGCTACCGAAGGTCTGTTCAGGCCTaGGTGTTTCACTTGACGCTGAGGGAAATGAGGGAAGCGAGCTTG | + |
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Preference number: 5 (lower is better) Translates to: FAFFLSCCYRRSVQA*VFHLTLREMREASL Trigger: CAAGCTCGCTTCCCTCATTTCCCTCAGCGTCAAGTGAAACACGCAGGCCTGAACAGACCTTCGGTAGCAGCAGCTGAGGAAGAAAGCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414156.1 |
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| CDS TCA 90 bp | GCTCCTCAACCAACTGGCTATGTGACCTTAGGCAGTTCACTTCACTaGGACTCAGTTTCTTCATCACAACCTGCTCTGGCACCATGCTGT | + |
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Preference number: 5 (lower is better) Translates to: APQPTGYVTLGSSLH*DSVSSSQPALAPCC Trigger: ACAGCATGGTGCCAGAGCAGGTTGTGATGAAGAAACTGAGTCTCAGTGAAGTGAACTGCCTAAGGTCACATAGCCAGTTGGTTGAGGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414156.1 |
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| CDS CCA 90 bp | TGCACTCAGATGGGCTTGGGTTTGAATCCTGGCTCCTCAACCAACTaGCTATGTGACCTTAGGCAGTTCACTTCACTGAGACTCAGTTTC | + |
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Preference number: 5 (lower is better) Translates to: CTQMGLGLNPGSSTN*LCDLRQFTSLRLSF Trigger: GAAACTGAGTCTCAGTGAAGTGAACTGCCTAAGGTCACATAGCCAGTTGGTTGAGGAGCCAGGATTCAAACCCAAGCCCATCTGAGTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414156.1 |
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| CDS CCA 72 bp | CCAGAAGGAGGTCAGATGCCAACAATTGCAGGTCCCTaGCTCAGGGTGACTGTAGCAGCAGAGAGGGAGTGG | + |
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Preference number: 6 (lower is better) Translates to: PEGGQMPTIAGP*LRVTVAAEREW Trigger: CCACTCCCTCTCTGCTGCTACAGTCACCCTGAGCCAGGGACCTGCAATTGTTGGCATCTGACCTCCTTCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414156.1 |
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| CDS CAA 90 bp | CTCAGCTGCTGCTACCGAAGGTCTGTTCAGGCCTGCGTGTTTCACTaGACGCTGAGGGAAATGAGGGAAGCGAGCTTGTTTTCTTCCACA | + |
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Preference number: 6 (lower is better) Translates to: LSCCYRRSVQACVFH*TLREMREASLFSST Trigger: TGTGGAAGAAAACAAGCTCGCTTCCCTCATTTCCCTCAGCGTCAAGTGAAACACGCAGGCCTGAACAGACCTTCGGTAGCAGCAGCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414156.1 |
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| CDS CAA 72 bp | TGCTACCGAAGGTCTGTTCAGGCCTGCGTGTTTCACTaGACGCTGAGGGAAATGAGGGAAGCGAGCTTGTTT | + |
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Preference number: 6 (lower is better) Translates to: CYRRSVQACVFH*TLREMREASLF Trigger: AAACAAGCTCGCTTCCCTCATTTCCCTCAGCGTCAAGTGAAACACGCAGGCCTGAACAGACCTTCGGTAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414156.1 |
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| CDS CAA 90 bp | GCCTGCGTGTTTCACTTGACGCTGAGGGAAATGAGGGAAGCGAGCTaGTTTTCTTCCACATCGTCTCTATTGGTAGCGCAAAGCCCAACA | + |
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Preference number: 6 (lower is better) Translates to: ACVFHLTLREMREAS*FSSTSSLLVAQSPT Trigger: TGTTGGGCTTTGCGCTACCAATAGAGACGATGTGGAAGAAAACAAGCTCGCTTCCCTCATTTCCCTCAGCGTCAAGTGAAACACGCAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414156.1 |
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| CDS CAA 72 bp | AGGGAAGCGAGCTTGTTTTCTTCCACATCGTCTCTATaGGTAGCGCAAAGCCCAACACCAAAAGGGTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: REASLFSSTSSL*VAQSPTPKGCF Trigger: GAAGCACCCTTTTGGTGTTGGGCTTTGCGCTACCAATAGAGACGATGTGGAAGAAAACAAGCTCGCTTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000414156.1 |
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| CDS CAA 72 bp | CCTCTGACAAATTATAATAGGGCCCAAGTGTGTGTTTaGAACACTCATACTGGGAGGGCCAGGCGAGACTCC | + |
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Preference number: 6 (lower is better) Translates to: PLTNYNRAQVCV*NTHTGRARRDS Trigger: GGAGTCTCGCCTGGCCCTCCCAGTATGAGTGTTCAAAACACACACTTGGGCCCTATTATAATTTGTCAGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414156.1 |
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| CDS CAA 90 bp | AGATCATTACCTCTGACAAATTATAATAGGGCCCAAGTGTGTGTTTaGAACACTCATACTGGGAGGGCCAGGCGAGACTCCCAGAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: RSLPLTNYNRAQVCV*NTHTGRARRDSQRR Trigger: CCTCCTCTGGGAGTCTCGCCTGGCCCTCCCAGTATGAGTGTTCAAAACACACACTTGGGCCCTATTATAATTTGTCAGAGGTAATGATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414156.1 |
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| CDS CAA 90 bp | AGGGAAATGAGGGAAGCGAGCTTGTTTTCTTCCACATCGTCTCTATaGGTAGCGCAAAGCCCAACACCAAAAGGGTGCTTCATAGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: REMREASLFSSTSSL*VAQSPTPKGCFIVP Trigger: TGGAACTATGAAGCACCCTTTTGGTGTTGGGCTTTGCGCTACCAATAGAGACGATGTGGAAGAAAACAAGCTCGCTTCCCTCATTTCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000414156.1 |
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| CDS CAA 72 bp | TTTCACTTGACGCTGAGGGAAATGAGGGAAGCGAGCTaGTTTTCTTCCACATCGTCTCTATTGGTAGCGCAA | + |
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Preference number: 6 (lower is better) Translates to: FHLTLREMREAS*FSSTSSLLVAQ Trigger: TTGCGCTACCAATAGAGACGATGTGGAAGAAAACAAGCTCGCTTCCCTCATTTCCCTCAGCGTCAAGTGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414156.1 |
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