RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ERI3 (Homo sapiens)

Ensembl gene IDs: ENSG00000117419

Ensembl transcript IDs: ENST00000372257.7, ENST00000372259.9, ENST00000452396.5, ENST00000456170.6, ENST00000457571.1, ENST00000462341.1, ENST00000479101.1, ENST00000489710.1, ENST00000495828.1, ENST00000649995.1

Found 309 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGGCACAAAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTaGAAGGGCACAAGCCCACGCCAAGGGCATGAGCCCACAGGGCAG +
Preference number: 1 (lower is better)
Translates to: GAQSVCSRRAKWPSP*KGTSPRQGHEPTGQ
Trigger: CTGCCCTGTGGGCTCATGCCCTTGGCGTGGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTTTGTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
3UTR TCA 90 bp CAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCACGCCAAGGGCATaGGCCCACAGGGCAGCTGGGGACACTCTGGACACAGAGCTATGC +
Preference number: 1 (lower is better)
Translates to: QVAKPLQGHKPTPRA*AHRAAGDTLDTELC
Trigger: GCATAGCTCTGTGTCCAGAGTGTCCCCAGCTGCCCTGTGGGCTCATGCCCTTGGCGTGGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
3UTR GCA 90 bp GAGGGAGAGGAGGATTCTGGGCTGGGCCAAACAGCTACCCTGTCCTaGCCCATCCTGTCCTCGGCCAATCAGAACGGCTTCGATGTCTGC +
Preference number: 1 (lower is better)
Translates to: EGEEDSGLGQTATLS*PILSSANQNGFDVC
Trigger: GCAGACATCGAAGCCGTTCTGATTGGCCGAGGACAGGATGGGGCAGGACAGGGTAGCTGTTTGGCCCAGCCCAGAATCCTCCTCTCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489710.1
ENST00000649995.1
3UTR TCA 90 bp ACACTCTGGACACAGAGCTATGCCACTCTCCCTCTTCCCCTCTGGTaGGGGAGAGGAGGATTCTGGGCTGGGCCAAACAGCTACCCTGTC +
Preference number: 1 (lower is better)
Translates to: TLWTQSYATLPLPLW*GRGGFWAGPNSYPV
Trigger: GACAGGGTAGCTGTTTGGCCCAGCCCAGAATCCTCCTCTCCCTCACCAGAGGGGAAGAGGGAGAGTGGCATAGCTCTGTGTCCAGAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000489710.1
ENST00000649995.1
3UTR-3UTR GCA 90 bp GGAGGCGGTGAGTGCCTGGGTCCCCCTAGCCCAGGCCCGCAATGGGAGGGGCTGAAGTGGCCAAGCCCTTaGAAGGGCACAAGCCCACGC +
Preference number: 2 (lower is better)
Translates to: GGGECLGPPSPGPQWEGLKWPSP*KGTSPR
Trigger: GCGTGGGCTTGTGCCCTTGCAAGGGCTTGGCCACTT...CAGCCCCTCCCATTGCGGGCCTGGGCTAGGGGGACCCAGGCACTCACCGCCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
3UTR-3UTR CCA 90 bp GAGGAGGCGGTGAGTGCCTGGGTCCCCCTAGCCCAGGCCCGCAATGGGAGGGGCTCCAGAAGGGCCAAGTaGCCAAGCCCTTGCAAGGGC +
Preference number: 2 (lower is better)
Translates to: EEAVSAWVPLAQARNGRGSRRAK*PSPCKG
Trigger: GCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGA...GCCCCTCCCATTGCGGGCCTGGGCTAGGGGGACCCAGGCACTCACCGCCTCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
3UTR-3UTR GCA 90 bp GAGGAGGCGGTGAGTGCCTGGGTCCCCCTAGCCCAGGCCCGCAATGGGAGGGGCGGGGCACAAAGTGTCTaGTCCAGAAGGGCCAAGTGG +
Preference number: 2 (lower is better)
Translates to: EEAVSAWVPLAQARNGRGGAQSV*SRRAKW
Trigger: CCACTTGGCCCTTCTGGAGCAGACACTTTGTGCCCC...GCCCCTCCCATTGCGGGCCTGGGCTAGGGGGACCCAGGCACTCACCGCCTCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
3UTR-3UTR GCA 90 bp GGAGGCGGTGAGTGCCTGGGTCCCCCTAGCCCAGGCCCGCAATGGGAGGGGCTGCTGGACACAGAGCTATaGCACTCTCCCTCTTCCCCT +
Preference number: 2 (lower is better)
Translates to: GGGECLGPPSPGPQWEGLLDTEL*HSPSSP
Trigger: AGGGGAAGAGGGAGAGTGGCATAGCTCTGTGTCCAG...CAGCCCCTCCCATTGCGGGCCTGGGCTAGGGGGACCCAGGCACTCACCGCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
3UTR-3UTR CCA 90 bp TGTACCAGGGAGGAGGCGGTGAGTGCCTGGGTCCCCCTAGCCCAGGCCCGCAATTCCAGAAGGGCCAAGTaGCCAAGCCCTTGCAAGGGC +
Preference number: 2 (lower is better)
Translates to: CTREEAVSAWVPLAQARNSRRAK*PSPCKG
Trigger: GCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGA...ATTGCGGGCCTGGGCTAGGGGGACCCAGGCACTCACCGCCTCCTCCCTGGTACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
3UTR-3UTR CCA 90 bp GGTGAGTGCCTGGGTCCCCCTAGCCCAGGCCCGCAATGGGAGGGGCTGATACTGTCCAGAAGGGCCAAGTaGCCAAGCCCTTGCAAGGGC +
Preference number: 2 (lower is better)
Translates to: GECLGPPSPGPQWEGLILSRRAK*PSPCKG
Trigger: GCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGA...CAGTATCAGCCCCTCCCATTGCGGGCCTGGGCTAGGGGGACCCAGGCACTCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
3UTR-3UTR CCA 90 bp GTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCACGCAGCCCAGGCCCGCAATaGGAGGGGCTGATACTGGGC +
Preference number: 2 (lower is better)
Translates to: VCSRRAKWPSPCKGTSPRSPGPQ*EGLILG
Trigger: GCCCAGTATCAGCCCCTCCCATTGCGGGCCTGGGCT...GCGTGGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
3UTR-3UTR GCA 90 bp GGTGAGTGCCTGGGTCCCCCTAGCCCAGGCCCGCAATGGGAGGGGCTGATACTGGGGGCACAAAGTGTCTaGTCCAGAAGGGCCAAGTGG +
Preference number: 2 (lower is better)
Translates to: GECLGPPSPGPQWEGLILGAQSV*SRRAKW
Trigger: CCACTTGGCCCTTCTGGAGCAGACACTTTGTGCCCC...CAGTATCAGCCCCTCCCATTGCGGGCCTGGGCTAGGGGGACCCAGGCACTCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
3UTR-3UTR GCA 90 bp GGTAGACACAAGGTGGGGCCTGATCTGTCCTGGAGCCCTGGGGGCACCACACACAAGTGGCCAAGCCCTTaGAAGGGCACAAGCCCACGC +
Preference number: 2 (lower is better)
Translates to: GRHKVGPDLSWSPGGTTHKWPSP*KGTSPR
Trigger: GCGTGGGCTTGTGCCCTTGCAAGGGCTTGGCCACTT...GTGTGTGGTGCCCCCAGGGCTCCAGGACAGATCAGGCCCCACCTTGTGTCTACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
3UTR-3UTR CCA 90 bp GTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCACGCACAGGAGGGGCTTGGTaGCCCCACAGAAGCCTGTGT +
Preference number: 2 (lower is better)
Translates to: VCSRRAKWPSPCKGTSPRTGGAW*PHRSLC
Trigger: ACACAGGCTTCTGTGGGGCCACCAAGCCCCTCCTGT...GCGTGGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
3UTR-3UTR CCA 90 bp GGTAGACACAAGGTGGGGCCTGATCTGTCCTGGAGCCCTGGGGGCACCACACACGGGAGAGGAGGATTCTaGGCTGGGCCAAACAGCTAC +
Preference number: 2 (lower is better)
Translates to: GRHKVGPDLSWSPGGTTHGRGGF*AGPNSY
Trigger: GTAGCTGTTTGGCCCAGCCCAGAATCCTCCTCTCCC...GTGTGTGGTGCCCCCAGGGCTCCAGGACAGATCAGGCCCCACCTTGTGTCTACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
3UTR-3UTR TCA 90 bp AGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCACGCCAAGGGCATCGCAATGGGAGGGGCTaGTACTGGGCTGAGATTGAG +
Preference number: 2 (lower is better)
Translates to: RRAKWPSPCKGTSPRQGHRNGRG*YWAEIE
Trigger: CTCAATCTCAGCCCAGTATCAGCCCCTCCCATTGCG...ATGCCCTTGGCGTGGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
3UTR-3UTR CCA 90 bp GTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCACGCAGGAGGATTCTGGGCTaGGCCAAACAGCTACCCTGT +
Preference number: 2 (lower is better)
Translates to: VCSRRAKWPSPCKGTSPRRRILG*AKQLPC
Trigger: ACAGGGTAGCTGTTTGGCCCAGCCCAGAATCCTCCT...GCGTGGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
3UTR-3UTR CCA 90 bp GGTAGACACAAGGTGGGGCCTGATCTGTCCTGGAGCCCTGGGGGCACCACACACCAGCTGGGGACACTCTaGACACAGAGCTATGCCACT +
Preference number: 2 (lower is better)
Translates to: GRHKVGPDLSWSPGGTTHQLGTL*TQSYAT
Trigger: AGTGGCATAGCTCTGTGTCCAGAGTGTCCCCAGCTG...GTGTGTGGTGCCCCCAGGGCTCCAGGACAGATCAGGCCCCACCTTGTGTCTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
3UTR-3UTR CCA 90 bp GGGGGCACAAAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCAGCTGGGGACACTCTaGACACAGAGCTATGCCACT +
Preference number: 2 (lower is better)
Translates to: GGTKCLLQKGQVAKPLQGQLGTL*TQSYAT
Trigger: AGTGGCATAGCTCTGTGTCCAGAGTGTCCCCAGCTG...CCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTTTGTGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
3UTR-3UTR CCA 90 bp GCCAAACAGCTACCCTGTCCTGCCCCATCCTGTCCTCGGCCAATCAGAACGGCTAGGAGGATTCTGGGCTaGGCCAAACAGCTACCCTGT +
Preference number: 2 (lower is better)
Translates to: AKQLPCPAPSCPRPIRTARRILG*AKQLPC
Trigger: ACAGGGTAGCTGTTTGGCCCAGCCCAGAATCCTCCT...AGCCGTTCTGATTGGCCGAGGACAGGATGGGGCAGGACAGGGTAGCTGTTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489710.1
ENST00000649995.1
3UTR-3UTR GCA 90 bp AAAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCTGGACACAGAGCTATaGCACTCTCCCTCTTCCCCT +
Preference number: 2 (lower is better)
Translates to: KVSAPEGPSGQALARAQALDTEL*HSPSSP
Trigger: AGGGGAAGAGGGAGAGTGGCATAGCTCTGTGTCCAG...GGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
3UTR-3UTR CCA 90 bp TGGGGACACTCTGGACACAGAGCTATGCCACTCTCCCTCTTCCCCTCTGGTGAGCAGCTGGGGACACTCTaGACACAGAGCTATGCCACT +
Preference number: 2 (lower is better)
Translates to: WGHSGHRAMPLSLFPSGEQLGTL*TQSYAT
Trigger: AGTGGCATAGCTCTGTGTCCAGAGTGTCCCCAGCTG...CTCACCAGAGGGGAAGAGGGAGAGTGGCATAGCTCTGTGTCCAGAGTGTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000489710.1
ENST00000649995.1
3UTR-3UTR GCA 90 bp ACAAAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCTGGACACAGAGCTATaGCACTCTCCCTCTTCCCCT +
Preference number: 2 (lower is better)
Translates to: TKCLLQKGQVAKPLQGHKLDTEL*HSPSSP
Trigger: AGGGGAAGAGGGAGAGTGGCATAGCTCTGTGTCCAG...CTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
3UTR-3UTR CCA 90 bp ACAAAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGAGGAGGATTCTGGGCTaGGCCAAACAGCTACCCTGT +
Preference number: 2 (lower is better)
Translates to: TKCLLQKGQVAKPLQGHKRRILG*AKQLPC
Trigger: ACAGGGTAGCTGTTTGGCCCAGCCCAGAATCCTCCT...CTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
3UTR-3UTR CCA 90 bp GAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCACGCCAAGGGCATGGCTGCTATTTCAGGCTaGGAAGTTGGTAACCGTTTT +
Preference number: 2 (lower is better)
Translates to: EGPSGQALARAQAHAKGMAAISG*EVGNRF
Trigger: AAAACGGTTACCAACTTCCCAGCCTGAAATAGCAGC...CATGCCCTTGGCGTGGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649995.1
3UTR-3UTR TCA 90 bp CAGCTACCCTGTCCTGCCCCATCCTGTCCTCGGCCAATCAGAACGGCTTCGATGAGGCGAGTGTCTTCATaGTGTTGGCAATGTTCTTGC +
Preference number: 2 (lower is better)
Translates to: QLPCPAPSCPRPIRTASMRRVSS*CWQCSC
Trigger: GCAAGAACATTGCCAACATCATGAAGACACTCGCCT...CATCGAAGCCGTTCTGATTGGCCGAGGACAGGATGGGGCAGGACAGGGTAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479101.1
ENST00000489710.1
ENST00000649995.1
3UTR-3UTR GCA 90 bp GGGGACACTCTGGACACAGAGCTATGCCACTCTCCCTCTTCCCCTCTGGTGAGGAACGGCTTCGATGTCTaGTTGAAGATGAAGCCTCGA +
Preference number: 2 (lower is better)
Translates to: GDTLDTELCHSPSSPLVRNGFDV*LKMKPR
Trigger: TCGAGGCTTCATCTTCAAGCAGACATCGAAGCCGTT...CCTCACCAGAGGGGAAGAGGGAGAGTGGCATAGCTCTGTGTCCAGAGTGTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489710.1
ENST00000649995.1
3UTR-3UTR CCA 90 bp CTGTCCTGCCCCATCCTGTCCTCGGCCAATCAGAACGGCTTCGATGTCTGCTTGCAGTCGTCTTTCTCCTaGTCTGGGATGCCACAACTA +
Preference number: 2 (lower is better)
Translates to: LSCPILSSANQNGFDVCLQSSFS*SGMPQL
Trigger: TAGTTGTGGCATCCCAGACCAGGAGAAAGACGACTG...CAAGCAGACATCGAAGCCGTTCTGATTGGCCGAGGACAGGATGGGGCAGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489710.1
3UTR-3UTR TCA 90 bp ACAGCTACCCTGTCCTGCCCCATCCTGTCCTCGGCCAATCAGAACGGCTTCGATAGGCGAGTGTCTTCATaGTGTTGGCAATGTTCTTGC +
Preference number: 2 (lower is better)
Translates to: TATLSCPILSSANQNGFDRRVSS*CWQCSC
Trigger: GCAAGAACATTGCCAACATCATGAAGACACTCGCCT...ATCGAAGCCGTTCTGATTGGCCGAGGACAGGATGGGGCAGGACAGGGTAGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479101.1
ENST00000489710.1
ENST00000649995.1
3UTR-3UTR CCA 90 bp GGCCAATCAGAACGGCTTCGATGTCTGCTTGAAGATGAAGCCTCGATAGGCGAGAGGAGGATTCTGGGCTaGGCCAAACAGCTACCCTGT +
Preference number: 2 (lower is better)
Translates to: GQSERLRCLLEDEASIGERRILG*AKQLPC
Trigger: ACAGGGTAGCTGTTTGGCCCAGCCCAGAATCCTCCT...CTCGCCTATCGAGGCTTCATCTTCAAGCAGACATCGAAGCCGTTCTGATTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489710.1
ENST00000649995.1
3UTR-3UTR TCA 90 bp GGCAATGTTCTTGCAGTCGTCTTTCTCCTGGTCTGGGATGCCACAACTAGAAGTTCACCTACAGCCAAGTaGAGGGAACCCAGCCAGGGA +
Preference number: 2 (lower is better)
Translates to: GNVLAVVFLLVWDATTRSSPTAK*REPSQG
Trigger: TCCCTGGCTGGGTTCCCTTCACTTGGCTGTAGGTGA...ACTTCTAGTTGTGGCATCCCAGACCAGGAGAAAGACGACTGCAAGAACATTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489710.1
3UTR-3UTR GCA 90 bp GGGGACACTCTGGACACAGAGCTATGCCACTCTCCCTCTTCCCCTCTGGTGAGGGATCAAATTGTTTCTTaGTGTATCTCAGGACACAGG +
Preference number: 2 (lower is better)
Translates to: GDTLDTELCHSPSSPLVRDQIVS*CISGHR
Trigger: CCTGTGTCCTGAGATACAGCAAGAAACAATTTGATC...CCTCACCAGAGGGGAAGAGGGAGAGTGGCATAGCTCTGTGTCCAGAGTGTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649995.1
3UTR GCA 72 bp CCACAGAAGCCTGTGTACCAGGGAGGAGGCGGTGAGTaGCTGGGTCCCCCTAGCCCAGGCCCGCAATGGGAG +
Preference number: 3 (lower is better)
Translates to: PQKPVYQGGGGE*LGPPSPGPQWE
Trigger: CTCCCATTGCGGGCCTGGGCTAGGGGGACCCAGGCACTCACCGCCTCCTCCCTGGTACACAGGCTTCTGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
3UTR-3UTR CAA 90 bp GGGGGCACAAAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCAAGTGGCCAAGCCCTaGCAAGGGCACAAGCCCACG +
Preference number: 3 (lower is better)
Translates to: GGTKCLLQKGQVAKPLQGQVAKP*QGHKPT
Trigger: CGTGGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTG...CCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTTTGTGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
3UTR GCA 72 bp GAGGATTCTGGGCTGGGCCAAACAGCTACCCTGTCCTaGCCCATCCTGTCCTCGGCCAATCAGAACGGCTTC +
Preference number: 3 (lower is better)
Translates to: EDSGLGQTATLS*PILSSANQNGF
Trigger: GAAGCCGTTCTGATTGGCCGAGGACAGGATGGGGCAGGACAGGGTAGCTGTTTGGCCCAGCCCAGAATCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489710.1
ENST00000649995.1
3UTR-3UTR CAA 90 bp CCGACTTTATTCAGTGGCACGTTCACAGCGGGGATGGGGGTAGACACAAGGTGGCAAGTGGCCAAGCCCTaGCAAGGGCACAAGCCCACG +
Preference number: 3 (lower is better)
Translates to: PTLFSGTFTAGMGVDTRWQVAKP*QGHKPT
Trigger: CGTGGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTG...CCACCTTGTGTCTACCCCCATCCCCGCTGTGAACGTGCCACTGAATAAAGTCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
3UTR-3UTR CAA 90 bp AAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCATGTTCTTGCAGTCGTaGAATAAAGGAGGCAGGCCG +
Preference number: 3 (lower is better)
Translates to: KCLLQKGQVAKPLQGHKPMFLQS*NKGGRP
Trigger: CGGCCTGCCTCCTTTATTCAACGACTGCAAGAACAT...GGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649995.1
3UTR-3UTR CAA 90 bp CAGCTACCCTGTCCTGCCCCATCCTGTCCTCGGCCAATCAGAACGGCTTCGATGAGTGTCTTCATGATGTaGGCAATGTTCTTGCAGTCG +
Preference number: 3 (lower is better)
Translates to: QLPCPAPSCPRPIRTASMSVFMM*AMFLQS
Trigger: CGACTGCAAGAACATTGCCAACATCATGAAGACACT...CATCGAAGCCGTTCTGATTGGCCGAGGACAGGATGGGGCAGGACAGGGTAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479101.1
ENST00000489710.1
ENST00000649995.1
3UTR-3UTR CAA 90 bp ACAGCTACCCTGTCCTGCCCCATCCTGTCCTCGGCCAATCAGAACGGCTTCGATAGTGTCTTCATGATGTaGGCAATGTTCTTGCAGTCG +
Preference number: 3 (lower is better)
Translates to: TATLSCPILSSANQNGFDSVFMM*AMFLQS
Trigger: CGACTGCAAGAACATTGCCAACATCATGAAGACACT...ATCGAAGCCGTTCTGATTGGCCGAGGACAGGATGGGGCAGGACAGGGTAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479101.1
ENST00000489710.1
ENST00000649995.1
CDS-3UTR GCA 90 bp GAGGAGGCGGTGAGTGCCTGGGTCCCCCTAGCCCAGGCCCGCAATGGGAGGGGCGGAGGAGGCGGTGAGTaGCTGGGTCCCCCTAGCCCA +
Preference number: 4 (lower is better)
Translates to: EEAVSAWVPLAQARNGRGGGGGE*LGPPSP
Trigger: TGGGCTAGGGGGACCCAGGCACTCACCGCCTCCTCC...GCCCCTCCCATTGCGGGCCTGGGCTAGGGGGACCCAGGCACTCACCGCCTCCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR CCA 90 bp GGAGGCGGTGAGTGCCTGGGTCCCCCTAGCCCAGGCCCGCAATGGGAGGGGCTGAGCCCAGGCCCGCAATaGGAGGGGCTGATACTGGGC +
Preference number: 4 (lower is better)
Translates to: GGGECLGPPSPGPQWEGLSPGPQ*EGLILG
Trigger: GCCCAGTATCAGCCCCTCCCATTGCGGGCCTGGGCT...CAGCCCCTCCCATTGCGGGCCTGGGCTAGGGGGACCCAGGCACTCACCGCCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR TCA 90 bp GAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCACGCCAAGGGCATGCCGTTCCCGGCCGCCTaGACAGCGGCAGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: EGPSGQALARAQAHAKGMPFPAA*TAAAST
Trigger: GGTGCTGGCTGCCGCTGTTCAGGCGGCCGGGAACGG...CATGCCCTTGGCGTGGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372257.7
CDS-3UTR GCA 90 bp TGTACCAGGGAGGAGGCGGTGAGTGCCTGGGTCCCCCTAGCCCAGGCCCGCAATGGAGGAGGCGGTGAGTaGCTGGGTCCCCCTAGCCCA +
Preference number: 4 (lower is better)
Translates to: CTREEAVSAWVPLAQARNGGGGE*LGPPSP
Trigger: TGGGCTAGGGGGACCCAGGCACTCACCGCCTCCTCC...ATTGCGGGCCTGGGCTAGGGGGACCCAGGCACTCACCGCCTCCTCCCTGGTACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR CCA 90 bp GAGGAGGCGGTGAGTGCCTGGGTCCCCCTAGCCCAGGCCCGCAATGGGAGGGGCACAGGAGGGGCTTGGTaGCCCCACAGAAGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: EEAVSAWVPLAQARNGRGTGGAW*PHRSLC
Trigger: ACACAGGCTTCTGTGGGGCCACCAAGCCCCTCCTGT...GCCCCTCCCATTGCGGGCCTGGGCTAGGGGGACCCAGGCACTCACCGCCTCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR CCA 90 bp GGTGAGTGCCTGGGTCCCCCTAGCCCAGGCCCGCAATGGGAGGGGCTGATACTGGGGCCTGATCTGTCCTaGAGCCCTGGGGGCACCACA +
Preference number: 4 (lower is better)
Translates to: GECLGPPSPGPQWEGLILGPDLS*SPGGTT
Trigger: TGTGGTGCCCCCAGGGCTCCAGGACAGATCAGGCCC...CAGTATCAGCCCCTCCCATTGCGGGCCTGGGCTAGGGGGACCCAGGCACTCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR CCA 90 bp GAGGAGGCGGTGAGTGCCTGGGTCCCCCTAGCCCAGGCCCGCAATGGGAGGGGCGGGCCGCCAGCTTTCTaGTGGATATGGAGCAGAACT +
Preference number: 4 (lower is better)
Translates to: EEAVSAWVPLAQARNGRGGPPAF*WIWSRT
Trigger: AGTTCTGCTCCATATCCACCAGAAAGCTGGCGGCCC...GCCCCTCCCATTGCGGGCCTGGGCTAGGGGGACCCAGGCACTCACCGCCTCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372257.7
CDS-3UTR CCA 90 bp GAGGAGGCGGTGAGTGCCTGGGTCCCCCTAGCCCAGGCCCGCAATGGGAGGGGCCTAGAAGTCCATTCTTaGGCCAGCAGCCCATGGCGA +
Preference number: 4 (lower is better)
Translates to: EEAVSAWVPLAQARNGRGLEVHS*ASSPWR
Trigger: TCGCCATGGGCTGCTGGCCCAAGAATGGACTTCTAG...GCCCCTCCCATTGCGGGCCTGGGCTAGGGGGACCCAGGCACTCACCGCCTCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR CCA 90 bp GAGGAGGCGGTGAGTGCCTGGGTCCCCCTAGCCCAGGCCCGCAATGGGAGGGGCCAGCTGGGGACACTCTaGACACAGAGCTATGCCACT +
Preference number: 4 (lower is better)
Translates to: EEAVSAWVPLAQARNGRGQLGTL*TQSYAT
Trigger: AGTGGCATAGCTCTGTGTCCAGAGTGTCCCCAGCTG...GCCCCTCCCATTGCGGGCCTGGGCTAGGGGGACCCAGGCACTCACCGCCTCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR TCA 90 bp GAGGAGGCGGTGAGTGCCTGGGTCCCCCTAGCCCAGGCCCGCAATGGGAGGGGCCCATCCACCATGGCTTaGATAATCCCGGTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: EEAVSAWVPLAQARNGRGPSTMA*IIPVSS
Trigger: AGAGCTCACCGGGATTATTCAAGCCATGGTGGATGG...GCCCCTCCCATTGCGGGCCTGGGCTAGGGGGACCCAGGCACTCACCGCCTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR GCA 90 bp GTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCACGCCAATGCCCGGGGTGTTaGCCCCAACTCGGGCCCATC +
Preference number: 4 (lower is better)
Translates to: VCSRRAKWPSPCKGTSPRQCPGC*PQLGPI
Trigger: GATGGGCCCGAGTTGGGGGCAACACCCCGGGCATTG...GCGTGGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372257.7
ENST00000649995.1
CDS-3UTR GCA 90 bp GAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCACGCCAAGGGCATGCATTGCCGCCATGGATaGGCCAAAGCCGTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: EGPSGQALARAQAHAKGMHCRHG*AKAVGR
Trigger: GCGGCCCACGGCTTTGGCGCATCCATGGCGGCAATG...CATGCCCTTGGCGTGGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372257.7
ENST00000649995.1
CDS-3UTR GCA 90 bp AGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCACGCCAAGGGCATGGAGGAGGCGGTGAGTaGCTGGGTCCCCCTAGCCCA +
Preference number: 4 (lower is better)
Translates to: RRAKWPSPCKGTSPRQGHGGGGE*LGPPSP
Trigger: TGGGCTAGGGGGACCCAGGCACTCACCGCCTCCTCC...ATGCCCTTGGCGTGGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR CCA 90 bp GGAGGCGGTGAGTGCCTGGGTCCCCCTAGCCCAGGCCCGCAATGGGAGGGGCTGGAAGTAATCCGCCACTaGCAAGCCCAAGTACTGGCA +
Preference number: 4 (lower is better)
Translates to: GGGECLGPPSPGPQWEGLEVIRH*QAQVLA
Trigger: TGCCAGTACTTGGGCTTGCCAGTGGCGGATTACTTC...CAGCCCCTCCCATTGCGGGCCTGGGCTAGGGGGACCCAGGCACTCACCGCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR CCA 90 bp GGGGACACTCTGGACACAGAGCTATGCCACTCTCCCTCTTCCCCTCTGGTGAGGGAGGCGGTGAGTGCCTaGGTCCCCCTAGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: GDTLDTELCHSPSSPLVREAVSA*VPLAQA
Trigger: GGCCTGGGCTAGGGGGACCCAGGCACTCACCGCCTC...CCTCACCAGAGGGGAAGAGGGAGAGTGGCATAGCTCTGTGTCCAGAGTGTCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR CCA 90 bp GGTAGACACAAGGTGGGGCCTGATCTGTCCTGGAGCCCTGGGGGCACCACACACGGGCCTGATCTGTCCTaGAGCCCTGGGGGCACCACA +
Preference number: 4 (lower is better)
Translates to: GRHKVGPDLSWSPGGTTHGPDLS*SPGGTT
Trigger: TGTGGTGCCCCCAGGGCTCCAGGACAGATCAGGCCC...GTGTGTGGTGCCCCCAGGGCTCCAGGACAGATCAGGCCCCACCTTGTGTCTACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR CCA 90 bp GAGGAGGCGGTGAGTGCCTGGGTCCCCCTAGCCCAGGCCCGCAATGGGAGGGGCCAATCTGCACCAAGTTaGCACAACTCTGCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: EEAVSAWVPLAQARNGRGQSAPS*HNSAAR
Trigger: CCTGGCTGCAGAGTTGTGCCAACTTGGTGCAGATTG...GCCCCTCCCATTGCGGGCCTGGGCTAGGGGGACCCAGGCACTCACCGCCTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372259.9
CDS-3UTR TCA 90 bp GGTGAGTGCCTGGGTCCCCCTAGCCCAGGCCCGCAATGGGAGGGGCTGATACTGCGCAATGGGAGGGGCTaGTACTGGGCTGAGATTGAG +
Preference number: 4 (lower is better)
Translates to: GECLGPPSPGPQWEGLILRNGRG*YWAEIE
Trigger: CTCAATCTCAGCCCAGTATCAGCCCCTCCCATTGCG...CAGTATCAGCCCCTCCCATTGCGGGCCTGGGCTAGGGGGACCCAGGCACTCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR TCA 90 bp GGAGGCGGTGAGTGCCTGGGTCCCCCTAGCCCAGGCCCGCAATGGGAGGGGCTGTGCAGCCAGGGCACCTaGAGCATGACAAACATTTTG +
Preference number: 4 (lower is better)
Translates to: GGGECLGPPSPGPQWEGLCSQGT*SMTNIL
Trigger: CAAAATGTTTGTCATGCTTCAGGTGCCCTGGCTGCA...CAGCCCCTCCCATTGCGGGCCTGGGCTAGGGGGACCCAGGCACTCACCGCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372259.9
CDS-3UTR GCA 90 bp AAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCCAGGCTCCCTCCAGGTaGAGGCCCCGACGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: KCLLQKGQVAKPLQGHKPQAPSR*RPRRLP
Trigger: AGGGAGACGTCGGGGCCTGCACCTGGAGGGAGCCTG...GGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372257.7
CDS-3UTR GCA 90 bp GAGGAGGCGGTGAGTGCCTGGGTCCCCCTAGCCCAGGCCCGCAATGGGAGGGGCGACAATGTGCCCAAGTaGCAGCCTCTATGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: EEAVSAWVPLAQARNGRGDNVPK*QPLCPV
Trigger: AACTGGACATAGAGGCTGGCACTTGGGCACATTGTC...GCCCCTCCCATTGCGGGCCTGGGCTAGGGGGACCCAGGCACTCACCGCCTCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372259.9
CDS-3UTR CCA 90 bp GTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCACGCGATGCGCCAAAGCCGTaGGCCGCCAGCTTTCTGGTG +
Preference number: 4 (lower is better)
Translates to: VCSRRAKWPSPCKGTSPRDAPKP*AASFLV
Trigger: CACCAGAAAGCTGGCGGCCCACGGCTTTGGCGCATC...GCGTGGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372257.7
ENST00000649995.1
CDS-3UTR CCA 90 bp AAAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCGAGGCGGTGAGTGCCTaGGTCCCCCTAGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: KVSAPEGPSGQALARAQAEAVSA*VPLAQA
Trigger: GGCCTGGGCTAGGGGGACCCAGGCACTCACCGCCTC...GGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR TCA 90 bp GAGGAGGCGGTGAGTGCCTGGGTCCCCCTAGCCCAGGCCCGCAATGGGAGGGGCAGGCGAGTGTCTTCATaGTGTTGGCAATGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: EEAVSAWVPLAQARNGRGRRVSS*CWQCSC
Trigger: GCAAGAACATTGCCAACATCATGAAGACACTCGCCT...GCCCCTCCCATTGCGGGCCTGGGCTAGGGGGACCCAGGCACTCACCGCCTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR TCA 90 bp AGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCACGCCAAGGGCATACACAAGGTGGGGCCTaGTCTGTCCTGGAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: RRAKWPSPCKGTSPRQGHTQGGA*SVLEPW
Trigger: CCAGGGCTCCAGGACAGATCAGGCCCCACCTTGTGT...ATGCCCTTGGCGTGGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR GCA 90 bp GCTACCCTGTCCTGCCCCATCCTGTCCTCGGCCAATCAGAACGGCTTCGATGTCCAATGCCCGGGGTGTTaGCCCCAACTCGGGCCCATC +
Preference number: 4 (lower is better)
Translates to: ATLSCPILSSANQNGFDVQCPGC*PQLGPI
Trigger: GATGGGCCCGAGTTGGGGGCAACACCCCGGGCATTG...GACATCGAAGCCGTTCTGATTGGCCGAGGACAGGATGGGGCAGGACAGGGTAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649995.1
CDS-3UTR GCA 90 bp GGTAGACACAAGGTGGGGCCTGATCTGTCCTGGAGCCCTGGGGGCACCACACACGGCCGGCCTATGTGTTaGAGGCTGAGGCCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: GRHKVGPDLSWSPGGTTHGRPMC*RLRPLF
Trigger: GAACAAGGGCCTCAGCCTGCAACACATAGGCCGGCC...GTGTGTGGTGCCCCCAGGGCTCCAGGACAGATCAGGCCCCACCTTGTGTCTACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR GCA 90 bp GGTAGACACAAGGTGGGGCCTGATCTGTCCTGGAGCCCTGGGGGCACCACACACTCTTGCAGTCGTCAATaGCGCTGTGGGGCCGGCCTA +
Preference number: 4 (lower is better)
Translates to: GRHKVGPDLSWSPGGTTHSCSRQ*RCGAGL
Trigger: TAGGCCGGCCCCACAGCGGCATTGACGACTGCAAGA...GTGTGTGGTGCCCCCAGGGCTCCAGGACAGATCAGGCCCCACCTTGTGTCTACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR GCA 90 bp GTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCACGCAAGTGGCCAAGCCCTTaGAAGGGCACAAGCCCACGC +
Preference number: 4 (lower is better)
Translates to: VCSRRAKWPSPCKGTSPRKWPSP*KGTSPR
Trigger: GCGTGGGCTTGTGCCCTTGCAAGGGCTTGGCCACTT...GCGTGGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
CDS-3UTR CCA 90 bp AAAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCGAGAGGCTGTCGCCATaGCAACGCCCCCTCCTCGGG +
Preference number: 4 (lower is better)
Translates to: KVSAPEGPSGQALARAQAERLSP*QRPLLG
Trigger: CCCGAGGAGGGGGCGTTGCCATGGCGACAGCCTCTC...GGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372257.7
ENST00000649995.1
CDS-3UTR CCA 90 bp AAACAGCTACCCTGTCCTGCCCCATCCTGTCCTCGGCCAATCAGAACGGCTTCGGAGAGGCTGTCGCCATaGCAACGCCCCCTCCTCGGG +
Preference number: 4 (lower is better)
Translates to: KQLPCPAPSCPRPIRTASERLSP*QRPLLG
Trigger: CCCGAGGAGGGGGCGTTGCCATGGCGACAGCCTCTC...CGAAGCCGTTCTGATTGGCCGAGGACAGGATGGGGCAGGACAGGGTAGCTGTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649995.1
CDS-3UTR CCA 90 bp TGTACCAGGGAGGAGGCGGTGAGTGCCTGGGTCCCCCTAGCCCAGGCCCGCAATCTAGAAGTCCATTCTTaGGCCAGCAGCCCATGGCGA +
Preference number: 4 (lower is better)
Translates to: CTREEAVSAWVPLAQARNLEVHS*ASSPWR
Trigger: TCGCCATGGGCTGCTGGCCCAAGAATGGACTTCTAG...ATTGCGGGCCTGGGCTAGGGGGACCCAGGCACTCACCGCCTCCTCCCTGGTACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR CCA 90 bp GGTAGACACAAGGTGGGGCCTGATCTGTCCTGGAGCCCTGGGGGCACCACACACTCGTCAATGCCGCTGTaGGGCCGGCCTATGTGTTGC +
Preference number: 4 (lower is better)
Translates to: GRHKVGPDLSWSPGGTTHSSMPL*GRPMCC
Trigger: GCAACACATAGGCCGGCCCCACAGCGGCATTGACGA...GTGTGTGGTGCCCCCAGGGCTCCAGGACAGATCAGGCCCCACCTTGTGTCTACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR CCA 90 bp GAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCACGCCAAGGGCATGTCCAGAAGGGCCAAGTaGCCAAGCCCTTGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: EGPSGQALARAQAHAKGMSRRAK*PSPCKG
Trigger: GCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGA...CATGCCCTTGGCGTGGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
CDS-3UTR CCA 90 bp GTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCACGCTCCAGAAGGGCCAAGTaGCCAAGCCCTTGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: VCSRRAKWPSPCKGTSPRSRRAK*PSPCKG
Trigger: GCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGA...GCGTGGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
CDS-3UTR CCA 90 bp AAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCAGCCCAGGCCCGCAATaGGAGGGGCTGATACTGGGC +
Preference number: 4 (lower is better)
Translates to: KCLLQKGQVAKPLQGHKPSPGPQ*EGLILG
Trigger: GCCCAGTATCAGCCCCTCCCATTGCGGGCCTGGGCT...GGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR CCA 90 bp CCGACTTTATTCAGTGGCACGTTCACAGCGGGGATGGGGGTAGACACAAGGTGGGAGGCGGTGAGTGCCTaGGTCCCCCTAGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: PTLFSGTFTAGMGVDTRWEAVSA*VPLAQA
Trigger: GGCCTGGGCTAGGGGGACCCAGGCACTCACCGCCTC...CCACCTTGTGTCTACCCCCATCCCCGCTGTGAACGTGCCACTGAATAAAGTCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR CCA 90 bp GGGGACACTCTGGACACAGAGCTATGCCACTCTCCCTCTTCCCCTCTGGTGAGGGGGCCTGATCTGTCCTaGAGCCCTGGGGGCACCACA +
Preference number: 4 (lower is better)
Translates to: GDTLDTELCHSPSSPLVRGPDLS*SPGGTT
Trigger: TGTGGTGCCCCCAGGGCTCCAGGACAGATCAGGCCC...CCTCACCAGAGGGGAAGAGGGAGAGTGGCATAGCTCTGTGTCCAGAGTGTCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR TCA 90 bp GAGGAGGCGGTGAGTGCCTGGGTCCCCCTAGCCCAGGCCCGCAATGGGAGGGGCCAACACAAAGATTTGTaGCAATGTGCCCAAGTGCCA +
Preference number: 4 (lower is better)
Translates to: EEAVSAWVPLAQARNGRGQHKDL*QCAQVP
Trigger: TGGCACTTGGGCACATTGTCACAAATCTTTGTGTTG...GCCCCTCCCATTGCGGGCCTGGGCTAGGGGGACCCAGGCACTCACCGCCTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372259.9
CDS-3UTR GCA 90 bp AGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCACGCCAAGGGCATTCTTGCAGTCGTCAATaGCGCTGTGGGGCCGGCCTA +
Preference number: 4 (lower is better)
Translates to: RRAKWPSPCKGTSPRQGHSCSRQ*RCGAGL
Trigger: TAGGCCGGCCCCACAGCGGCATTGACGACTGCAAGA...ATGCCCTTGGCGTGGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR GCA 90 bp GGGGGCACAAAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGTCTTGCAGTCGTCAATaGCGCTGTGGGGCCGGCCTA +
Preference number: 4 (lower is better)
Translates to: GGTKCLLQKGQVAKPLQGSCSRQ*RCGAGL
Trigger: TAGGCCGGCCCCACAGCGGCATTGACGACTGCAAGA...CCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTTTGTGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR CCA 90 bp GGGGGCACAAAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGGGCAAGCCCAAGTACTaGCACTGGCCTGGGAGCATG +
Preference number: 4 (lower is better)
Translates to: GGTKCLLQKGQVAKPLQGGKPKY*HWPGSM
Trigger: CATGCTCCCAGGCCAGTGCCAGTACTTGGGCTTGCC...CCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTTTGTGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
CDS-3UTR CCA 90 bp GGGGGCACAAAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGTCGTCAATGCCGCTGTaGGGCCGGCCTATGTGTTGC +
Preference number: 4 (lower is better)
Translates to: GGTKCLLQKGQVAKPLQGSSMPL*GRPMCC
Trigger: GCAACACATAGGCCGGCCCCACAGCGGCATTGACGA...CCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTTTGTGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR CCA 90 bp GGCCAAACAGCTACCCTGTCCTGCCCCATCCTGTCCTCGGCCAATCAGAACGGCTCCAGAAGGGCCAAGTaGCCAAGCCCTTGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: GQTATLSCPILSSANQNGSRRAK*PSPCKG
Trigger: GCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGA...GCCGTTCTGATTGGCCGAGGACAGGATGGGGCAGGACAGGGTAGCTGTTTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649995.1
CDS-3UTR CCA 90 bp GGTAGACACAAGGTGGGGCCTGATCTGTCCTGGAGCCCTGGGGGCACCACACACGGGGTAGACACAAGGTaGGGCCTGATCTGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: GRHKVGPDLSWSPGGTTHGVDTR*GLICPG
Trigger: TCCAGGACAGATCAGGCCCCACCTTGTGTCTACCCC...GTGTGTGGTGCCCCCAGGGCTCCAGGACAGATCAGGCCCCACCTTGTGTCTACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR CCA 90 bp GAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCACGCCAAGGGCATGGGGGTAGACACAAGGTaGGGCCTGATCTGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: EGPSGQALARAQAHAKGMGVDTR*GLICPG
Trigger: TCCAGGACAGATCAGGCCCCACCTTGTGTCTACCCC...CATGCCCTTGGCGTGGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR CCA 90 bp GGTGAGTGCCTGGGTCCCCCTAGCCCAGGCCCGCAATGGGAGGGGCTGATACTGCCCGACTTTATTCAGTaGCACGTTCACAGCGGGGAT +
Preference number: 4 (lower is better)
Translates to: GECLGPPSPGPQWEGLILPDFIQ*HVHSGD
Trigger: ATCCCCGCTGTGAACGTGCCACTGAATAAAGTCGGG...CAGTATCAGCCCCTCCCATTGCGGGCCTGGGCTAGGGGGACCCAGGCACTCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR CCA 90 bp ACCCTGTCCTGCCCCATCCTGTCCTCGGCCAATCAGAACGGCTTCGATGTCTGCGACCCAATGCCGCTGTaGGGCCGGCCTATGTGTTGC +
Preference number: 4 (lower is better)
Translates to: TLSCPILSSANQNGFDVCDPMPL*GRPMCC
Trigger: GCAACACATAGGCCGGCCCCACAGCGGCATTGGGTC...GCAGACATCGAAGCCGTTCTGATTGGCCGAGGACAGGATGGGGCAGGACAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479101.1
CDS-3UTR TCA 90 bp GGTGAGTGCCTGGGTCCCCCTAGCCCAGGCCCGCAATGGGAGGGGCTGATACTGCTATGTGTTGCAGGCTaGGGCCCTTGTTCATGTCTA +
Preference number: 4 (lower is better)
Translates to: GECLGPPSPGPQWEGLILLCVAG*GPCSCL
Trigger: TAGACATGAACAAGGGCCTCAGCCTGCAACACATAG...CAGTATCAGCCCCTCCCATTGCGGGCCTGGGCTAGGGGGACCCAGGCACTCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR TCA 90 bp AAAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCACACAAGGTGGGGCCTaGTCTGTCCTGGAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: KVSAPEGPSGQALARAQATQGGA*SVLEPW
Trigger: CCAGGGCTCCAGGACAGATCAGGCCCCACCTTGTGT...GGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR TCA 90 bp AGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCACGCCAAGGGCATCGAAGCTGTAAGCCTTaGCCCCCGGTGTGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: RRAKWPSPCKGTSPRQGHRSCKP*PPVCSP
Trigger: AGGAGAACACACCGGGGGTCAAGGCTTACAGCTTCG...ATGCCCTTGGCGTGGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456170.6
CDS-3UTR GCA 90 bp GGGGACACTCTGGACACAGAGCTATGCCACTCTCCCTCTTCCCCTCTGGTGAGGGGCCGGCCTATGTGTTaGAGGCTGAGGCCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: GDTLDTELCHSPSSPLVRGRPMC*RLRPLF
Trigger: GAACAAGGGCCTCAGCCTGCAACACATAGGCCGGCC...CCTCACCAGAGGGGAAGAGGGAGAGTGGCATAGCTCTGTGTCCAGAGTGTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
CDS-3UTR GCA 90 bp GGTAGACACAAGGTGGGGCCTGATCTGTCCTGGAGCCCTGGGGGCACCACACACCTGGACACAGAGCTATaGCACTCTCCCTCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: GRHKVGPDLSWSPGGTTHLDTEL*HSPSSP
Trigger: AGGGGAAGAGGGAGAGTGGCATAGCTCTGTGTCCAG...GTGTGTGGTGCCCCCAGGGCTCCAGGACAGATCAGGCCCCACCTTGTGTCTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR CCA 90 bp GGTAGACACAAGGTGGGGCCTGATCTGTCCTGGAGCCCTGGGGGCACCACACACCCGCCAGCTTTCTGGTaGATATGGAGCAGAACTCCG +
Preference number: 4 (lower is better)
Translates to: GRHKVGPDLSWSPGGTTHPPAFW*IWSRTP
Trigger: CGGAGTTCTGCTCCATATCCACCAGAAAGCTGGCGG...GTGTGTGGTGCCCCCAGGGCTCCAGGACAGATCAGGCCCCACCTTGTGTCTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372257.7
CDS-3UTR CCA 90 bp TGTACCAGGGAGGAGGCGGTGAGTGCCTGGGTCCCCCTAGCCCAGGCCCGCAATGAGCTCTGTACAGAATaGGGTAAGCTGTGGATGGAC +
Preference number: 4 (lower is better)
Translates to: CTREEAVSAWVPLAQARNELCTE*GKLWMD
Trigger: GTCCATCCACAGCTTACCCCATTCTGTACAGAGCTC...ATTGCGGGCCTGGGCTAGGGGGACCCAGGCACTCACCGCCTCCTCCCTGGTACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR CCA 90 bp GGGGACACTCTGGACACAGAGCTATGCCACTCTCCCTCTTCCCCTCTGGTGAGGTCGTCAATGCCGCTGTaGGGCCGGCCTATGTGTTGC +
Preference number: 4 (lower is better)
Translates to: GDTLDTELCHSPSSPLVRSSMPL*GRPMCC
Trigger: GCAACACATAGGCCGGCCCCACAGCGGCATTGACGA...CCTCACCAGAGGGGAAGAGGGAGAGTGGCATAGCTCTGTGTCCAGAGTGTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR CCA 90 bp GAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCACGCCAAGGGCATGCAGCTGGGGACACTCTaGACACAGAGCTATGCCACT +
Preference number: 4 (lower is better)
Translates to: EGPSGQALARAQAHAKGMQLGTL*TQSYAT
Trigger: AGTGGCATAGCTCTGTGTCCAGAGTGTCCCCAGCTG...CATGCCCTTGGCGTGGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
CDS-3UTR CCA 90 bp GTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCACGCCAGCTGGGGACACTCTaGACACAGAGCTATGCCACT +
Preference number: 4 (lower is better)
Translates to: VCSRRAKWPSPCKGTSPRQLGTL*TQSYAT
Trigger: AGTGGCATAGCTCTGTGTCCAGAGTGTCCCCAGCTG...GCGTGGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
CDS-3UTR CCA 90 bp CCGACTTTATTCAGTGGCACGTTCACAGCGGGGATGGGGGTAGACACAAGGTGGAGCCCAGGCCCGCAATaGGAGGGGCTGATACTGGGC +
Preference number: 4 (lower is better)
Translates to: PTLFSGTFTAGMGVDTRWSPGPQ*EGLILG
Trigger: GCCCAGTATCAGCCCCTCCCATTGCGGGCCTGGGCT...CCACCTTGTGTCTACCCCCATCCCCGCTGTGAACGTGCCACTGAATAAAGTCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR CCA 90 bp AAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCACAGGAGGGGCTTGGTaGCCCCACAGAAGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: KCLLQKGQVAKPLQGHKPTGGAW*PHRSLC
Trigger: ACACAGGCTTCTGTGGGGCCACCAAGCCCCTCCTGT...GGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR CCA 90 bp GGTAGACACAAGGTGGGGCCTGATCTGTCCTGGAGCCCTGGGGGCACCACACACACACACCATGCACTATaGATGGGAGGGGGCACAGGA +
Preference number: 4 (lower is better)
Translates to: GRHKVGPDLSWSPGGTTHTHHAL*MGGGTG
Trigger: TCCTGTGCCCCCTCCCATCCATAGTGCATGGTGTGT...GTGTGTGGTGCCCCCAGGGCTCCAGGACAGATCAGGCCCCACCTTGTGTCTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR CCA 90 bp CAGCTACCCTGTCCTGCCCCATCCTGTCCTCGGCCAATCAGAACGGCTTCGATGAAGGCAATGCCGCTGTaGGGCCGGCCTATGTGTTGC +
Preference number: 4 (lower is better)
Translates to: QLPCPAPSCPRPIRTASMKAMPL*GRPMCC
Trigger: GCAACACATAGGCCGGCCCCACAGCGGCATTGCCTT...CATCGAAGCCGTTCTGATTGGCCGAGGACAGGATGGGGCAGGACAGGGTAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649995.1
CDS-3UTR TCA 90 bp AAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCCGCAATGGGAGGGGCTaGTACTGGGCTGAGATTGAG +
Preference number: 4 (lower is better)
Translates to: KCLLQKGQVAKPLQGHKPRNGRG*YWAEIE
Trigger: CTCAATCTCAGCCCAGTATCAGCCCCTCCCATTGCG...GGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR TCA 90 bp CCGACTTTATTCAGTGGCACGTTCACAGCGGGGATGGGGGTAGACACAAGGTGGACACAAGGTGGGGCCTaGTCTGTCCTGGAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: PTLFSGTFTAGMGVDTRWTQGGA*SVLEPW
Trigger: CCAGGGCTCCAGGACAGATCAGGCCCCACCTTGTGT...CCACCTTGTGTCTACCCCCATCCCCGCTGTGAACGTGCCACTGAATAAAGTCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR GCA 90 bp GGTGAGTGCCTGGGTCCCCCTAGCCCAGGCCCGCAATGGGAGGGGCTGATACTGTGTTGGCAATGTTCTTaGAGTCGTCAATGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: GECLGPPSPGPQWEGLILCWQCS*SRQCRC
Trigger: ACAGCGGCATTGACGACTGCAAGAACATTGCCAACA...CAGTATCAGCCCCTCCCATTGCGGGCCTGGGCTAGGGGGACCCAGGCACTCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR GCA 90 bp CTGTCCTGCCCCATCCTGTCCTCGGCCAATCAGAACGGCTTCGATGTCTGCTTGAAGTGGCCAAGCCCTTaGAAGGGCACAAGCCCACGC +
Preference number: 4 (lower is better)
Translates to: LSCPILSSANQNGFDVCLKWPSP*KGTSPR
Trigger: GCGTGGGCTTGTGCCCTTGCAAGGGCTTGGCCACTT...CAAGCAGACATCGAAGCCGTTCTGATTGGCCGAGGACAGGATGGGGCAGGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649995.1
CDS-3UTR GCA 90 bp GGGGACACTCTGGACACAGAGCTATGCCACTCTCCCTCTTCCCCTCTGGTGAGGGGGGCACAAAGTGTCTaGTCCAGAAGGGCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: GDTLDTELCHSPSSPLVRGAQSV*SRRAKW
Trigger: CCACTTGGCCCTTCTGGAGCAGACACTTTGTGCCCC...CCTCACCAGAGGGGAAGAGGGAGAGTGGCATAGCTCTGTGTCCAGAGTGTCCCC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
CDS-3UTR CCA 90 bp TGGGCCAAACAGCTACCCTGTCCTGCCCCATCCTGTCCTCGGCCAATCAGAACGAGGTTCTGTGAGAGCTaGAAAGCCCCAATGCCCGGG +
Preference number: 4 (lower is better)
Translates to: WAKQLPCPAPSCPRPIRTRFCES*KAPMPG
Trigger: CCCGGGCATTGGGGCTTTCCAGCTCTCACAGAACCT...CGTTCTGATTGGCCGAGGACAGGATGGGGCAGGACAGGGTAGCTGTTTGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649995.1
CDS-3UTR CCA 90 bp GGCCAAACAGCTACCCTGTCCTGCCCCATCCTGTCCTCGGCCAATCAGAACGGCCCGCCAGCTTTCTGGTaGATATGGAGCAGAACTCCG +
Preference number: 4 (lower is better)
Translates to: GQTATLSCPILSSANQNGPPAFW*IWSRTP
Trigger: CGGAGTTCTGCTCCATATCCACCAGAAAGCTGGCGG...GCCGTTCTGATTGGCCGAGGACAGGATGGGGCAGGACAGGGTAGCTGTTTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649995.1
CDS-3UTR CCA 90 bp GGGCCAAACAGCTACCCTGTCCTGCCCCATCCTGTCCTCGGCCAATCAGAACGGGGGCCGCCAGCTTTCTaGTGGATATGGAGCAGAACT +
Preference number: 4 (lower is better)
Translates to: GPNSYPVLPHPVLGQSERGPPAF*WIWSRT
Trigger: AGTTCTGCTCCATATCCACCAGAAAGCTGGCGGCCC...CCGTTCTGATTGGCCGAGGACAGGATGGGGCAGGACAGGGTAGCTGTTTGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649995.1
CDS-3UTR CCA 90 bp GTCCTGCCCCATCCTGTCCTCGGCCAATCAGAACGGCTTCGATGTCTGCTTGAAGATGCGCCAAAGCCGTaGGCCGCCAGCTTTCTGGTG +
Preference number: 4 (lower is better)
Translates to: VLPHPVLGQSERLRCLLEDAPKP*AASFLV
Trigger: CACCAGAAAGCTGGCGGCCCACGGCTTTGGCGCATC...TTCAAGCAGACATCGAAGCCGTTCTGATTGGCCGAGGACAGGATGGGGCAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649995.1
CDS-3UTR CCA 90 bp GTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCACGCGAATGGGGTAAGCTGTaGATGGACTACAGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: VCSRRAKWPSPCKGTSPREWGKL*MDYRLD
Trigger: GTCCAGCCTGTAGTCCATCCACAGCTTACCCCATTC...GCGTGGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
CDS-3UTR CCA 90 bp TGGGGACACTCTGGACACAGAGCTATGCCACTCTCCCTCTTCCCCTCTGGTGAGGGCAAGCCCAAGTACTaGCACTGGCCTGGGAGCATG +
Preference number: 4 (lower is better)
Translates to: WGHSGHRAMPLSLFPSGEGKPKY*HWPGSM
Trigger: CATGCTCCCAGGCCAGTGCCAGTACTTGGGCTTGCC...CTCACCAGAGGGGAAGAGGGAGAGTGGCATAGCTCTGTGTCCAGAGTGTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
CDS-3UTR CCA 90 bp GGTAGACACAAGGTGGGGCCTGATCTGTCCTGGAGCCCTGGGGGCACCACACACGAAGTAATCCGCCACTaGCAAGCCCAAGTACTGGCA +
Preference number: 4 (lower is better)
Translates to: GRHKVGPDLSWSPGGTTHEVIRH*QAQVLA
Trigger: TGCCAGTACTTGGGCTTGCCAGTGGCGGATTACTTC...GTGTGTGGTGCCCCCAGGGCTCCAGGACAGATCAGGCCCCACCTTGTGTCTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR CCA 90 bp AGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCACGCCAAGGGCATTGGGCCAGCAGCCCATaGCGAAGCTGTAAGCCTTTT +
Preference number: 4 (lower is better)
Translates to: RRAKWPSPCKGTSPRQGHWASSP*RSCKPF
Trigger: AAAAGGCTTACAGCTTCGCCATGGGCTGCTGGCCCA...ATGCCCTTGGCGTGGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000649995.1
CDS-3UTR CCA 90 bp GGGGACACTCTGGACACAGAGCTATGCCACTCTCCCTCTTCCCCTCTGGTGAGGGGGAGAGGAGGATTCTaGGCTGGGCCAAACAGCTAC +
Preference number: 4 (lower is better)
Translates to: GDTLDTELCHSPSSPLVRGRGGF*AGPNSY
Trigger: GTAGCTGTTTGGCCCAGCCCAGAATCCTCCTCTCCC...CCTCACCAGAGGGGAAGAGGGAGAGTGGCATAGCTCTGTGTCCAGAGTGTCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000489710.1
ENST00000649995.1
CDS-3UTR CCA 90 bp GCCAAACAGCTACCCTGTCCTGCCCCATCCTGTCCTCGGCCAATCAGAACGGCTGGGAGAGGAGGATTCTaGGCTGGGCCAAACAGCTAC +
Preference number: 4 (lower is better)
Translates to: AKQLPCPAPSCPRPIRTAGRGGF*AGPNSY
Trigger: GTAGCTGTTTGGCCCAGCCCAGAATCCTCCTCTCCC...AGCCGTTCTGATTGGCCGAGGACAGGATGGGGCAGGACAGGGTAGCTGTTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489710.1
ENST00000649995.1
CDS-3UTR CCA 90 bp CTGGGCCAAACAGCTACCCTGTCCTGCCCCATCCTGTCCTCGGCCAATCAGAACGCCTCATCAGTCTTCTaGGTCCAATGCCGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: LGQTATLSCPILSSANQNASSVF*VQCRCG
Trigger: CCCACAGCGGCATTGGACCCAGAAGACTGATGAGGC...GTTCTGATTGGCCGAGGACAGGATGGGGCAGGACAGGGTAGCTGTTTGGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489710.1
CDS-3UTR TCA 90 bp CTACCCTGTCCTGCCCCATCCTGTCCTCGGCCAATCAGAACGGCTTCGATGTCTTCACCTACAGCCAAGTaGAGGGAACCCAGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: LPCPAPSCPRPIRTASMSSPTAK*REPSQG
Trigger: TCCCTGGCTGGGTTCCCTTCACTTGGCTGTAGGTGA...AGACATCGAAGCCGTTCTGATTGGCCGAGGACAGGATGGGGCAGGACAGGGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489710.1
CDS-3UTR GCA 90 bp AAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCAGGGAAGGACACCATTaGCGCCATGGATGCGCCAAA +
Preference number: 4 (lower is better)
Translates to: KCLLQKGQVAKPLQGHKPREGHH*RHGCAK
Trigger: TTTGGCGCATCCATGGCGGCAATGGTGTCCTTCCCT...GGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372257.7
ENST00000649995.1
CDS-3UTR GCA 90 bp GGGGGCACAAAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGAGAGGTGCCCCAATCTaGACCAAGTTGGCACAACTC +
Preference number: 4 (lower is better)
Translates to: GGTKCLLQKGQVAKPLQGRGAPI*TKLAQL
Trigger: GAGTTGTGCCAACTTGGTGCAGATTGGGGCACCTCT...CCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTTTGTGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372259.9
CDS-3UTR GCA 90 bp GGCCAATCAGAACGGCTTCGATGTCTGCTTGAAGATGAAGCCTCGATAGGCGAGCCAGTGCAGACCCAATaGCGCTGTGGGGCCGGCCTA +
Preference number: 4 (lower is better)
Translates to: GQSERLRCLLEDEASIGEPVQTQ*RCGAGL
Trigger: TAGGCCGGCCCCACAGCGGCATTGGGTCTGCACTGG...CTCGCCTATCGAGGCTTCATCTTCAAGCAGACATCGAAGCCGTTCTGATTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479101.1
CDS-3UTR CCA 90 bp ACAAAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGACACCATTGCCGCCATaGATGCGCCAAAGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: TKCLLQKGQVAKPLQGHKTPLPP*MRQSRG
Trigger: CCCACGGCTTTGGCGCATCCATGGCGGCAATGGTGT...CTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372257.7
ENST00000649995.1
CDS-3UTR CCA 90 bp AAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCGTGGCTTGTCGCACGTaGCCTCAAAGTCCAGCACTA +
Preference number: 4 (lower is better)
Translates to: KCLLQKGQVAKPLQGHKPVACRT*PQSPAL
Trigger: TAGTGCTGGACTTTGAGGCCACGTGCGACAAGCCAC...GGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372257.7
ENST00000649995.1
CDS-3UTR CCA 90 bp AAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCCTGAGGATGAATCTGTaGCTTGTCGCACGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: KCLLQKGQVAKPLQGHKPLRMNL*LVARGL
Trigger: GAGGCCACGTGCGACAAGCCACAGATTCATCCTCAG...GGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372257.7
ENST00000649995.1
CDS-3UTR CCA 90 bp GGGGGCACAAAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGGAATGGGGTAAGCTGTaGATGGACTACAGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: GGTKCLLQKGQVAKPLQGEWGKL*MDYRLD
Trigger: GTCCAGCCTGTAGTCCATCCACAGCTTACCCCATTC...CCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTTTGTGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
CDS-3UTR CCA 90 bp ACAAAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGGGCAAGCCCAAGTACTaGCACTGGCCTGGGAGCATG +
Preference number: 4 (lower is better)
Translates to: TKCLLQKGQVAKPLQGHKGKPKY*HWPGSM
Trigger: CATGCTCCCAGGCCAGTGCCAGTACTTGGGCTTGCC...CTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
CDS-3UTR CCA 90 bp CCGACTTTATTCAGTGGCACGTTCACAGCGGGGATGGGGGTAGACACAAGGTGGGGCAAGCCCAAGTACTaGCACTGGCCTGGGAGCATG +
Preference number: 4 (lower is better)
Translates to: PTLFSGTFTAGMGVDTRWGKPKY*HWPGSM
Trigger: CATGCTCCCAGGCCAGTGCCAGTACTTGGGCTTGCC...CCACCTTGTGTCTACCCCCATCCCCGCTGTGAACGTGCCACTGAATAAAGTCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR CCA 90 bp ACCCTGTCCTGCCCCATCCTGTCCTCGGCCAATCAGAACGGCTTCGATGTCTGCTGGGCCAGCAGCCCATaGCGAAGCTGTAAGCCTTTT +
Preference number: 4 (lower is better)
Translates to: TLSCPILSSANQNGFDVCWASSP*RSCKPF
Trigger: AAAAGGCTTACAGCTTCGCCATGGGCTGCTGGCCCA...GCAGACATCGAAGCCGTTCTGATTGGCCGAGGACAGGATGGGGCAGGACAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649995.1
CDS-3UTR CCA 90 bp GGGGACACTCTGGACACAGAGCTATGCCACTCTCCCTCTTCCCCTCTGGTGAGGCTAGAAGTCCATTCTTaGGCCAGCAGCCCATGGCGA +
Preference number: 4 (lower is better)
Translates to: GDTLDTELCHSPSSPLVRLEVHS*ASSPWR
Trigger: TCGCCATGGGCTGCTGGCCCAAGAATGGACTTCTAG...CCTCACCAGAGGGGAAGAGGGAGAGTGGCATAGCTCTGTGTCCAGAGTGTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
CDS-3UTR CCA 90 bp GCTACCCTGTCCTGCCCCATCCTGTCCTCGGCCAATCAGAACGGCTTCGATGTCAGGAGGATTCTGGGCTaGGCCAAACAGCTACCCTGT +
Preference number: 4 (lower is better)
Translates to: ATLSCPILSSANQNGFDVRRILG*AKQLPC
Trigger: ACAGGGTAGCTGTTTGGCCCAGCCCAGAATCCTCCT...GACATCGAAGCCGTTCTGATTGGCCGAGGACAGGATGGGGCAGGACAGGGTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489710.1
ENST00000649995.1
CDS-3UTR CCA 90 bp AAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCCAGCTGGGGACACTCTaGACACAGAGCTATGCCACT +
Preference number: 4 (lower is better)
Translates to: KCLLQKGQVAKPLQGHKPQLGTL*TQSYAT
Trigger: AGTGGCATAGCTCTGTGTCCAGAGTGTCCCCAGCTG...GGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
CDS-3UTR CCA 90 bp ACAAAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGTCCAGAAGGGCCAAGTaGCCAAGCCCTTGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: TKCLLQKGQVAKPLQGHKSRRAK*PSPCKG
Trigger: GCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGA...CTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
CDS-3UTR CCA 90 bp ACAAAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGACAGGAGGGGCTTGGTaGCCCCACAGAAGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: TKCLLQKGQVAKPLQGHKTGGAW*PHRSLC
Trigger: ACACAGGCTTCTGTGGGGCCACCAAGCCCCTCCTGT...CTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR CCA 90 bp AAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCACACACCATGCACTATaGATGGGAGGGGGCACAGGA +
Preference number: 4 (lower is better)
Translates to: KCLLQKGQVAKPLQGHKPTHHAL*MGGGTG
Trigger: TCCTGTGCCCCCTCCCATCCATAGTGCATGGTGTGT...GGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR CCA 90 bp TGGGGACACTCTGGACACAGAGCTATGCCACTCTCCCTCTTCCCCTCTGGTGAGGGGGTAGACACAAGGTaGGGCCTGATCTGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: WGHSGHRAMPLSLFPSGEGVDTR*GLICPG
Trigger: TCCAGGACAGATCAGGCCCCACCTTGTGTCTACCCC...CTCACCAGAGGGGAAGAGGGAGAGTGGCATAGCTCTGTGTCCAGAGTGTCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR TCA 90 bp GTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCACGCGGATGGGGAACTCGATaGTTTCCTGAGGATGAATCT +
Preference number: 4 (lower is better)
Translates to: VCSRRAKWPSPCKGTSPRGWGTR*FPEDES
Trigger: AGATTCATCCTCAGGAAATCATCGAGTTCCCCATCC...GCGTGGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372257.7
ENST00000649995.1
CDS-3UTR TCA 90 bp GTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCACGCGGCTGGACATACATGTaGAAGGTAGACTCAATCTCC +
Preference number: 4 (lower is better)
Translates to: VCSRRAKWPSPCKGTSPRGWTYM*KVDSIS
Trigger: GGAGATTGAGTCTACCTTTCACATGTATGTCCAGCC...GCGTGGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
CDS-3UTR TCA 90 bp GGGGGCACAAAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCTATGTGTTGCAGGCTaGGGCCCTTGTTCATGTCTA +
Preference number: 4 (lower is better)
Translates to: GGTKCLLQKGQVAKPLQGLCVAG*GPCSCL
Trigger: TAGACATGAACAAGGGCCTCAGCCTGCAACACATAG...CCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTTTGTGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
CDS-3UTR TCA 90 bp ACAAAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCGCAATGGGAGGGGCTaGTACTGGGCTGAGATTGAG +
Preference number: 4 (lower is better)
Translates to: TKCLLQKGQVAKPLQGHKRNGRG*YWAEIE
Trigger: CTCAATCTCAGCCCAGTATCAGCCCCTCCCATTGCG...CTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR GCA 90 bp ACAAAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGGGGGCACAAAGTGTCTaGTCCAGAAGGGCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: TKCLLQKGQVAKPLQGHKGAQSV*SRRAKW
Trigger: CCACTTGGCCCTTCTGGAGCAGACACTTTGTGCCCC...CTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
CDS-3UTR GCA 90 bp TGTACCAGGGAGGAGGCGGTGAGTGCCTGGGTCCCCCTAGCCCAGGCCCGCAATATTTCCATCCCATATTaGCCAGCCAGTACTTCCATA +
Preference number: 4 (lower is better)
Translates to: CTREEAVSAWVPLAQARNISIPY*PASTSI
Trigger: TATGGAAGTACTGGCTGGGCAATATGGGATGGAAAT...ATTGCGGGCCTGGGCTAGGGGGACCCAGGCACTCACCGCCTCCTCCCTGGTACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372259.9
CDS-3UTR GCA 90 bp CCTGTCCTGCCCCATCCTGTCCTCGGCCAATCAGAACGGCTTCGATGTCTGCTTTTAGGAAAAAGGCAATaGCGCTGTGGGGCCGGCCTA +
Preference number: 4 (lower is better)
Translates to: PVLPHPVLGQSERLRCLLLGKRQ*RCGAGL
Trigger: TAGGCCGGCCCCACAGCGGCATTGCCTTTTTCCTAA...AAGCAGACATCGAAGCCGTTCTGATTGGCCGAGGACAGGATGGGGCAGGACAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000649995.1
CDS-3UTR CCA 90 bp CCGACTTTATTCAGTGGCACGTTCACAGCGGGGATGGGGGTAGACACAAGGTGGAGGTTCTGTGAGAGCTaGAAAGCCCCAATGCCCGGG +
Preference number: 4 (lower is better)
Translates to: PTLFSGTFTAGMGVDTRWRFCES*KAPMPG
Trigger: CCCGGGCATTGGGGCTTTCCAGCTCTCACAGAACCT...CCACCTTGTGTCTACCCCCATCCCCGCTGTGAACGTGCCACTGAATAAAGTCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372257.7
CDS-3UTR CCA 90 bp GGGCCAAACAGCTACCCTGTCCTGCCCCATCCTGTCCTCGGCCAATCAGAACGGGCTTTCTGGTGGATATaGAGCAGAACTCCGGAACAC +
Preference number: 4 (lower is better)
Translates to: GPNSYPVLPHPVLGQSERAFWWI*SRTPEH
Trigger: GTGTTCCGGAGTTCTGCTCCATATCCACCAGAAAGC...CCGTTCTGATTGGCCGAGGACAGGATGGGGCAGGACAGGGTAGCTGTTTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649995.1
CDS-3UTR CCA 90 bp CTGTCCTGCCCCATCCTGTCCTCGGCCAATCAGAACGGCTTCGATGTCTGCTTGCTGAGGATGAATCTGTaGCTTGTCGCACGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LSCPILSSANQNGFDVCLLRMNL*LVARGL
Trigger: GAGGCCACGTGCGACAAGCCACAGATTCATCCTCAG...CAAGCAGACATCGAAGCCGTTCTGATTGGCCGAGGACAGGATGGGGCAGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649995.1
CDS-3UTR CCA 90 bp AGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCACGCCAAGGGCATGAGCTCTGTACAGAATaGGGTAAGCTGTGGATGGAC +
Preference number: 4 (lower is better)
Translates to: RRAKWPSPCKGTSPRQGHELCTE*GKLWMD
Trigger: GTCCATCCACAGCTTACCCCATTCTGTACAGAGCTC...ATGCCCTTGGCGTGGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
CDS-3UTR CCA 90 bp CTGTCCTGCCCCATCCTGTCCTCGGCCAATCAGAACGGCTTCGATGTCTGCTTGCTAGAAGTCCATTCTTaGGCCAGCAGCCCATGGCGA +
Preference number: 4 (lower is better)
Translates to: LSCPILSSANQNGFDVCLLEVHS*ASSPWR
Trigger: TCGCCATGGGCTGCTGGCCCAAGAATGGACTTCTAG...CAAGCAGACATCGAAGCCGTTCTGATTGGCCGAGGACAGGATGGGGCAGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649995.1
CDS-3UTR CCA 90 bp TGGGGACACTCTGGACACAGAGCTATGCCACTCTCCCTCTTCCCCTCTGGTGAGAGGAGGATTCTGGGCTaGGCCAAACAGCTACCCTGT +
Preference number: 4 (lower is better)
Translates to: WGHSGHRAMPLSLFPSGERRILG*AKQLPC
Trigger: ACAGGGTAGCTGTTTGGCCCAGCCCAGAATCCTCCT...CTCACCAGAGGGGAAGAGGGAGAGTGGCATAGCTCTGTGTCCAGAGTGTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000489710.1
ENST00000649995.1
CDS-3UTR CCA 90 bp ACAAAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGGGGAGAGGAGGATTCTaGGCTGGGCCAAACAGCTAC +
Preference number: 4 (lower is better)
Translates to: TKCLLQKGQVAKPLQGHKGRGGF*AGPNSY
Trigger: GTAGCTGTTTGGCCCAGCCCAGAATCCTCCTCTCCC...CTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
CDS-3UTR CCA 90 bp AAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCCCCGACTTTATTCAGTaGCACGTTCACAGCGGGGAT +
Preference number: 4 (lower is better)
Translates to: KCLLQKGQVAKPLQGHKPPDFIQ*HVHSGD
Trigger: ATCCCCGCTGTGAACGTGCCACTGAATAAAGTCGGG...GGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR TCA 90 bp AGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCACGCCAAGGGCATGGATGGGGAACTCGATaGTTTCCTGAGGATGAATCT +
Preference number: 4 (lower is better)
Translates to: RRAKWPSPCKGTSPRQGHGWGTR*FPEDES
Trigger: AGATTCATCCTCAGGAAATCATCGAGTTCCCCATCC...ATGCCCTTGGCGTGGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372257.7
ENST00000649995.1
CDS-3UTR TCA 90 bp AGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCACGCCAAGGGCATGGCTGGACATACATGTaGAAGGTAGACTCAATCTCC +
Preference number: 4 (lower is better)
Translates to: RRAKWPSPCKGTSPRQGHGWTYM*KVDSIS
Trigger: GGAGATTGAGTCTACCTTTCACATGTATGTCCAGCC...ATGCCCTTGGCGTGGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
CDS-3UTR TCA 90 bp TGGGGACACTCTGGACACAGAGCTATGCCACTCTCCCTCTTCCCCTCTGGTGAGCCATCCACCATGGCTTaGATAATCCCGGTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: WGHSGHRAMPLSLFPSGEPSTMA*IIPVSS
Trigger: AGAGCTCACCGGGATTATTCAAGCCATGGTGGATGG...CTCACCAGAGGGGAAGAGGGAGAGTGGCATAGCTCTGTGTCCAGAGTGTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
CDS-3UTR TCA 90 bp CCAAACAGCTACCCTGTCCTGCCCCATCCTGTCCTCGGCCAATCAGAACGGCTTCCATCCACCATGGCTTaGATAATCCCGGTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: PNSYPVLPHPVLGQSERLPSTMA*IIPVSS
Trigger: AGAGCTCACCGGGATTATTCAAGCCATGGTGGATGG...AAGCCGTTCTGATTGGCCGAGGACAGGATGGGGCAGGACAGGGTAGCTGTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649995.1
CDS-3UTR TCA 90 bp AGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCACGCCAAGGGCATAGGCGAGTGTCTTCATaGTGTTGGCAATGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: RRAKWPSPCKGTSPRQGHRRVSS*CWQCSC
Trigger: GCAAGAACATTGCCAACATCATGAAGACACTCGCCT...ATGCCCTTGGCGTGGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
CDS-3UTR TCA 90 bp GGCCAAACAGCTACCCTGTCCTGCCCCATCCTGTCCTCGGCCAATCAGAACGGCAGGCGAGTGTCTTCATaGTGTTGGCAATGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: GQTATLSCPILSSANQNGRRVSS*CWQCSC
Trigger: GCAAGAACATTGCCAACATCATGAAGACACTCGCCT...GCCGTTCTGATTGGCCGAGGACAGGATGGGGCAGGACAGGGTAGCTGTTTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479101.1
ENST00000489710.1
ENST00000649995.1
CDS-3UTR GCA 90 bp TCAGAACGGCTTCGATGTCTGCTTGAAGATGAAGCCTCGATAGGCGAGTGTCTTCATTGCCGCCATGGATaGGCCAAAGCCGTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: SERLRCLLEDEASIGECLHCRHG*AKAVGR
Trigger: GCGGCCCACGGCTTTGGCGCATCCATGGCGGCAATG...AAGACACTCGCCTATCGAGGCTTCATCTTCAAGCAGACATCGAAGCCGTTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649995.1
CDS-3UTR GCA 90 bp CCCCATCCTGTCCTCGGCCAATCAGAACGGCTTCGATGTCTGCTTGAAGATGAAGGCCGGCCTATGTGTTaGAGGCTGAGGCCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: PHPVLGQSERLRCLLEDEGRPMC*RLRPLF
Trigger: GAACAAGGGCCTCAGCCTGCAACACATAGGCCGGCC...TTCATCTTCAAGCAGACATCGAAGCCGTTCTGATTGGCCGAGGACAGGATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479101.1
ENST00000649995.1
CDS-3UTR GCA 90 bp GGGGGCACAAAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGAACGGCTTCGATGTCTaGTTGAAGATGAAGCCTCGA +
Preference number: 4 (lower is better)
Translates to: GGTKCLLQKGQVAKPLQGNGFDV*LKMKPR
Trigger: TCGAGGCTTCATCTTCAAGCAGACATCGAAGCCGTT...CCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTTTGTGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
CDS-3UTR GCA 90 bp TGGGGACACTCTGGACACAGAGCTATGCCACTCTCCCTCTTCCCCTCTGGTGAGTGCACACACACCCAGTaGCTCGTTTCCCCGACTTTA +
Preference number: 4 (lower is better)
Translates to: WGHSGHRAMPLSLFPSGECTHTQ*LVSPTL
Trigger: TAAAGTCGGGGAAACGAGGCACTGGGTGTGTGTGCA...CTCACCAGAGGGGAAGAGGGAGAGTGGCATAGCTCTGTGTCCAGAGTGTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR GCA 90 bp AAAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCTGCACACACACCCAGTaGCTCGTTTCCCCGACTTTA +
Preference number: 4 (lower is better)
Translates to: KVSAPEGPSGQALARAQACTHTQ*LVSPTL
Trigger: TAAAGTCGGGGAAACGAGGCACTGGGTGTGTGTGCA...GGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR GCA 90 bp ATCCTGTCCTCGGCCAATCAGAACGGCTTCGATGTCTGCTTGAAGATGAAGCCTGTCTTCTGGGTCCAATaGCGCTGTGGGGCCGGCCTA +
Preference number: 4 (lower is better)
Translates to: ILSSANQNGFDVCLKMKPVFWVQ*RCGAGL
Trigger: TAGGCCGGCCCCACAGCGGCATTGGACCCAGAAGAC...AGGCTTCATCTTCAAGCAGACATCGAAGCCGTTCTGATTGGCCGAGGACAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489710.1
CDS-3UTR CCA 90 bp AAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCGCTTTCTGGTGGATATaGAGCAGAACTCCGGAACAC +
Preference number: 4 (lower is better)
Translates to: KCLLQKGQVAKPLQGHKPAFWWI*SRTPEH
Trigger: GTGTTCCGGAGTTCTGCTCCATATCCACCAGAAAGC...GGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372257.7
ENST00000649995.1
CDS-3UTR CCA 90 bp GGCCAATCAGAACGGCTTCGATGTCTGCTTGAAGATGAAGCCTCGATAGGCGAGACACCATTGCCGCCATaGATGCGCCAAAGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: GQSERLRCLLEDEASIGETPLPP*MRQSRG
Trigger: CCCACGGCTTTGGCGCATCCATGGCGGCAATGGTGT...CTCGCCTATCGAGGCTTCATCTTCAAGCAGACATCGAAGCCGTTCTGATTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649995.1
CDS-3UTR CCA 90 bp TGGGGACACTCTGGACACAGAGCTATGCCACTCTCCCTCTTCCCCTCTGGTGAGGAATGGGGTAAGCTGTaGATGGACTACAGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: WGHSGHRAMPLSLFPSGEEWGKL*MDYRLD
Trigger: GTCCAGCCTGTAGTCCATCCACAGCTTACCCCATTC...CTCACCAGAGGGGAAGAGGGAGAGTGGCATAGCTCTGTGTCCAGAGTGTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
CDS-3UTR CCA 90 bp CCTGTCCTGCCCCATCCTGTCCTCGGCCAATCAGAACGGCTTCGATGTCTGCTTGAATGGGGTAAGCTGTaGATGGACTACAGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: PVLPHPVLGQSERLRCLLEWGKL*MDYRLD
Trigger: GTCCAGCCTGTAGTCCATCCACAGCTTACCCCATTC...AAGCAGACATCGAAGCCGTTCTGATTGGCCGAGGACAGGATGGGGCAGGACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649995.1
CDS-3UTR CCA 90 bp GGGGACACTCTGGACACAGAGCTATGCCACTCTCCCTCTTCCCCTCTGGTGAGGGAGCTCTGTACAGAATaGGGTAAGCTGTGGATGGAC +
Preference number: 4 (lower is better)
Translates to: GDTLDTELCHSPSSPLVRELCTE*GKLWMD
Trigger: GTCCATCCACAGCTTACCCCATTCTGTACAGAGCTC...CCTCACCAGAGGGGAAGAGGGAGAGTGGCATAGCTCTGTGTCCAGAGTGTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
CDS-3UTR CCA 90 bp ACAAAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGTGGGCCAGCAGCCCATaGCGAAGCTGTAAGCCTTTT +
Preference number: 4 (lower is better)
Translates to: TKCLLQKGQVAKPLQGHKWASSP*RSCKPF
Trigger: AAAAGGCTTACAGCTTCGCCATGGGCTGCTGGCCCA...CTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000649995.1
CDS-3UTR CCA 90 bp CCGACTTTATTCAGTGGCACGTTCACAGCGGGGATGGGGGTAGACACAAGGTGGAGGAGGATTCTGGGCTaGGCCAAACAGCTACCCTGT +
Preference number: 4 (lower is better)
Translates to: PTLFSGTFTAGMGVDTRWRRILG*AKQLPC
Trigger: ACAGGGTAGCTGTTTGGCCCAGCCCAGAATCCTCCT...CCACCTTGTGTCTACCCCCATCCCCGCTGTGAACGTGCCACTGAATAAAGTCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR CCA 90 bp CCGACTTTATTCAGTGGCACGTTCACAGCGGGGATGGGGGTAGACACAAGGTGGACACACCATGCACTATaGATGGGAGGGGGCACAGGA +
Preference number: 4 (lower is better)
Translates to: PTLFSGTFTAGMGVDTRWTHHAL*MGGGTG
Trigger: TCCTGTGCCCCCTCCCATCCATAGTGCATGGTGTGT...CCACCTTGTGTCTACCCCCATCCCCGCTGTGAACGTGCCACTGAATAAAGTCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR TCA 90 bp TGGGGACACTCTGGACACAGAGCTATGCCACTCTCCCTCTTCCCCTCTGGTGAGATGCTGAAGGTTCTGTaGGAGCTGGAAAGCCCCAAT +
Preference number: 4 (lower is better)
Translates to: WGHSGHRAMPLSLFPSGEMLKVL*ELESPN
Trigger: ATTGGGGCTTTCCAGCTCTCACAGAACCTTCAGCAT...CTCACCAGAGGGGAAGAGGGAGAGTGGCATAGCTCTGTGTCCAGAGTGTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372257.7
ENST00000649995.1
CDS-3UTR TCA 90 bp AAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCGGCTGGACATACATGTaGAAGGTAGACTCAATCTCC +
Preference number: 4 (lower is better)
Translates to: KCLLQKGQVAKPLQGHKPGWTYM*KVDSIS
Trigger: GGAGATTGAGTCTACCTTTCACATGTATGTCCAGCC...GGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
CDS-3UTR TCA 90 bp AAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCAGGCGAGTGTCTTCATaGTGTTGGCAATGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: KCLLQKGQVAKPLQGHKPRRVSS*CWQCSC
Trigger: GCAAGAACATTGCCAACATCATGAAGACACTCGCCT...GGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
CDS-3UTR TCA 90 bp GGGCCAAACAGCTACCCTGTCCTGCCCCATCCTGTCCTCGGCCAATCAGAACGGATCTATGGTTGCTACTaGAGAACAGTCTGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: GPNSYPVLPHPVLGQSERIYGCY*RTVWCL
Trigger: CAGACACCAGACTGTTCTTCAGTAGCAACCATAGAT...CCGTTCTGATTGGCCGAGGACAGGATGGGGCAGGACAGGGTAGCTGTTTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479101.1
CDS-3UTR GCA 90 bp ATCCTGTCCTCGGCCAATCAGAACGGCTTCGATGTCTGCTTGAAGATGAAGCCTGGCCGGCCTATGTGTTaGAGGCTGAGGCCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: ILSSANQNGFDVCLKMKPGRPMC*RLRPLF
Trigger: GAACAAGGGCCTCAGCCTGCAACACATAGGCCGGCC...AGGCTTCATCTTCAAGCAGACATCGAAGCCGTTCTGATTGGCCGAGGACAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479101.1
ENST00000649995.1
CDS-3UTR GCA 90 bp GGGGACACTCTGGACACAGAGCTATGCCACTCTCCCTCTTCCCCTCTGGTGAGGTGTTGGCAATGTTCTTaGAGTCGTCAATGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: GDTLDTELCHSPSSPLVRCWQCS*SRQCRC
Trigger: ACAGCGGCATTGACGACTGCAAGAACATTGCCAACA...CCTCACCAGAGGGGAAGAGGGAGAGTGGCATAGCTCTGTGTCCAGAGTGTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR GCA 90 bp GCCAAACAGCTACCCTGTCCTGCCCCATCCTGTCCTCGGCCAATCAGAACGGCTAACGGCTTCGATGTCTaGTTGAAGATGAAGCCTCGA +
Preference number: 4 (lower is better)
Translates to: AKQLPCPAPSCPRPIRTANGFDV*LKMKPR
Trigger: TCGAGGCTTCATCTTCAAGCAGACATCGAAGCCGTT...AGCCGTTCTGATTGGCCGAGGACAGGATGGGGCAGGACAGGGTAGCTGTTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479101.1
ENST00000489710.1
ENST00000649995.1
CDS-3UTR GCA 90 bp ACAAAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGTGCACACACACCCAGTaGCTCGTTTCCCCGACTTTA +
Preference number: 4 (lower is better)
Translates to: TKCLLQKGQVAKPLQGHKCTHTQ*LVSPTL
Trigger: TAAAGTCGGGGAAACGAGGCACTGGGTGTGTGTGCA...CTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR GCA 90 bp GGGCCAAACAGCTACCCTGTCCTGCCCCATCCTGTCCTCGGCCAATCAGAACGGTGTTGGCAATGTTCTTaGAGTCGTCTTTCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: GPNSYPVLPHPVLGQSERCWQCS*SRLSPG
Trigger: ACCAGGAGAAAGACGACTGCAAGAACATTGCCAACA...CCGTTCTGATTGGCCGAGGACAGGATGGGGCAGGACAGGGTAGCTGTTTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489710.1
CDS-3UTR GCA 90 bp CTGTCCTGCCCCATCCTGTCCTCGGCCAATCAGAACGGCTTCGATGTCTGCTTGGGACAAAGAGGACGCTaGTATTTCAGGCTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: LSCPILSSANQNGFDVCLGQRGR*YFRLGS
Trigger: ACTTCCCAGCCTGAAATAGCAGCGTCCTCTTTGTCC...CAAGCAGACATCGAAGCCGTTCTGATTGGCCGAGGACAGGATGGGGCAGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649995.1
CDS-3UTR CCA 90 bp CCGACTTTATTCAGTGGCACGTTCACAGCGGGGATGGGGGTAGACACAAGGTGGCCCAAGTACTGGCACTaGCCTGGGAGCATGACTTTT +
Preference number: 4 (lower is better)
Translates to: PTLFSGTFTAGMGVDTRWPKYWH*PGSMTF
Trigger: AAAAGTCATGCTCCCAGGCCAGTGCCAGTACTTGGG...CCACCTTGTGTCTACCCCCATCCCCGCTGTGAACGTGCCACTGAATAAAGTCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR CCA 90 bp ACAAAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCAAGTACTGGCACTaGCCTGGGAGCATGACTTTT +
Preference number: 4 (lower is better)
Translates to: TKCLLQKGQVAKPLQGHKPKYWH*PGSMTF
Trigger: AAAAGTCATGCTCCCAGGCCAGTGCCAGTACTTGGG...CTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
CDS-3UTR CCA 90 bp CCGACTTTATTCAGTGGCACGTTCACAGCGGGGATGGGGGTAGACACAAGGTGGGAAGTAATCCGCCACTaGCAAGCCCAAGTACTGGCA +
Preference number: 4 (lower is better)
Translates to: PTLFSGTFTAGMGVDTRWEVIRH*QAQVLA
Trigger: TGCCAGTACTTGGGCTTGCCAGTGGCGGATTACTTC...CCACCTTGTGTCTACCCCCATCCCCGCTGTGAACGTGCCACTGAATAAAGTCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR CCA 90 bp ACAAAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGGAAGTAATCCGCCACTaGCAAGCCCAAGTACTGGCA +
Preference number: 4 (lower is better)
Translates to: TKCLLQKGQVAKPLQGHKEVIRH*QAQVLA
Trigger: TGCCAGTACTTGGGCTTGCCAGTGGCGGATTACTTC...CTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
CDS-3UTR TCA 90 bp CTGTCCTGCCCCATCCTGTCCTCGGCCAATCAGAACGGCTTCGATGTCTGCTTGAGGCGAGTGTCTTCATaGTGTTGGCAATGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: LSCPILSSANQNGFDVCLRRVSS*CWQCSC
Trigger: GCAAGAACATTGCCAACATCATGAAGACACTCGCCT...CAAGCAGACATCGAAGCCGTTCTGATTGGCCGAGGACAGGATGGGGCAGGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479101.1
ENST00000489710.1
ENST00000649995.1
CDS-3UTR GCA 90 bp AAAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCTGTTGGCAATGTTCTTaGAGTCGTCAATGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: KVSAPEGPSGQALARAQACWQCS*SRQCRC
Trigger: ACAGCGGCATTGACGACTGCAAGAACATTGCCAACA...GGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR GCA 90 bp CCTGTCCTGCCCCATCCTGTCCTCGGCCAATCAGAACGGCTTCGATGTCTGCTTAACGGCTTCGATGTCTaGTTGAAGATGAAGCCTCGA +
Preference number: 4 (lower is better)
Translates to: PVLPHPVLGQSERLRCLLNGFDV*LKMKPR
Trigger: TCGAGGCTTCATCTTCAAGCAGACATCGAAGCCGTT...AAGCAGACATCGAAGCCGTTCTGATTGGCCGAGGACAGGATGGGGCAGGACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479101.1
ENST00000489710.1
ENST00000649995.1
CDS-3UTR GCA 90 bp CCCATCCTGTCCTCGGCCAATCAGAACGGCTTCGATGTCTGCTTGAAGATGAAGCTGGACACAGAGCTATaGCACTCTCCCTCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: PILSSANQNGFDVCLKMKLDTEL*HSPSSP
Trigger: AGGGGAAGAGGGAGAGTGGCATAGCTCTGTGTCCAG...CTTCATCTTCAAGCAGACATCGAAGCCGTTCTGATTGGCCGAGGACAGGATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489710.1
ENST00000649995.1
CDS-3UTR GCA 90 bp GCCTCGATAGGCGAGTGTCTTCATGATGTTGGCAATGTTCTTGCAGTCGTCCATATCCAGGCAGGCCAGTaGAGACCCAATGCCGCTGTG +
Preference number: 4 (lower is better)
Translates to: ASIGECLHDVGNVLAVVHIQAGQ*RPNAAV
Trigger: CACAGCGGCATTGGGTCTGCACTGGCCTGCCTGGAT...ATGGACGACTGCAAGAACATTGCCAACATCATGAAGACACTCGCCTATCGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479101.1
CDS-3UTR CCA 90 bp CCCATCCTGTCCTCGGCCAATCAGAACGGCTTCGATGTCTGCTTGAAGATGAAGAGGAGGATTCTGGGCTaGGCCAAACAGCTACCCTGT +
Preference number: 4 (lower is better)
Translates to: PILSSANQNGFDVCLKMKRRILG*AKQLPC
Trigger: ACAGGGTAGCTGTTTGGCCCAGCCCAGAATCCTCCT...CTTCATCTTCAAGCAGACATCGAAGCCGTTCTGATTGGCCGAGGACAGGATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489710.1
ENST00000649995.1
CDS-3UTR TCA 90 bp ACAAAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGGGCTGGACATACATGTaGAAGGTAGACTCAATCTCC +
Preference number: 4 (lower is better)
Translates to: TKCLLQKGQVAKPLQGHKGWTYM*KVDSIS
Trigger: GGAGATTGAGTCTACCTTTCACATGTATGTCCAGCC...CTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
CDS-3UTR GCA 90 bp TTCTTGCAGTCGTCTTTCTCCTGGTCTGGGATGCCACAACTAGAAGTGCCAGGTCTGGACACAGAGCTATaGCACTCTCCCTCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: FLQSSFSWSGMPQLEVPGLDTEL*HSPSSP
Trigger: AGGGGAAGAGGGAGAGTGGCATAGCTCTGTGTCCAG...ACCTGGCACTTCTAGTTGTGGCATCCCAGACCAGGAGAAAGACGACTGCAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489710.1
CDS-3UTR GCA 90 bp GAACGGCTTCGATGTCTGCTTGAAGATGAAGCCTCGATAGGCGAGTGTCTTCATGGGGCACAAAGTGTCTaGTCCAGAAGGGCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: ERLRCLLEDEASIGECLHGAQSV*SRRAKW
Trigger: CCACTTGGCCCTTCTGGAGCAGACACTTTGTGCCCC...ATGAAGACACTCGCCTATCGAGGCTTCATCTTCAAGCAGACATCGAAGCCGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649995.1
CDS-3UTR GCA 90 bp CCCATCCTGTCCTCGGCCAATCAGAACGGCTTCGATGTCTGCTTGAAGATGAAGACAGCTGAGCAGATCTaGCATACCTGGCAGCCTCAT +
Preference number: 4 (lower is better)
Translates to: PILSSANQNGFDVCLKMKTAEQI*HTWQPH
Trigger: ATGAGGCTGCCAGGTATGGCAGATCTGCTCAGCTGT...CTTCATCTTCAAGCAGACATCGAAGCCGTTCTGATTGGCCGAGGACAGGATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489710.1
CDS-3UTR CCA 90 bp TGGGGACACTCTGGACACAGAGCTATGCCACTCTCCCTCTTCCCCTCTGGTGAGCAGGGAGAAAATAAGTaGGAGCCCAGCACTTTTCTT +
Preference number: 4 (lower is better)
Translates to: WGHSGHRAMPLSLFPSGEQGENK*EPSTFL
Trigger: AAGAAAAGTGCTGGGCTCCCACTTATTTTCTCCCTG...CTCACCAGAGGGGAAGAGGGAGAGTGGCATAGCTCTGTGTCCAGAGTGTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000372257.7
ENST00000649995.1
CDS-3UTR CCA 90 bp GAACGGCTTCGATGTCTGCTTGAAGATGAAGCCTCGATAGGCGAGTGTCTTCATGGGAGAGGAGGATTCTaGGCTGGGCCAAACAGCTAC +
Preference number: 4 (lower is better)
Translates to: ERLRCLLEDEASIGECLHGRGGF*AGPNSY
Trigger: GTAGCTGTTTGGCCCAGCCCAGAATCCTCCTCTCCC...ATGAAGACACTCGCCTATCGAGGCTTCATCTTCAAGCAGACATCGAAGCCGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489710.1
ENST00000649995.1
CDS-3UTR CCA 90 bp TTCTTGCAGTCGTCTTTCTCCTGGTCTGGGATGCCACAACTAGAAGTGCCAGGTCAGCTGGGGACACTCTaGACACAGAGCTATGCCACT +
Preference number: 4 (lower is better)
Translates to: FLQSSFSWSGMPQLEVPGQLGTL*TQSYAT
Trigger: AGTGGCATAGCTCTGTGTCCAGAGTGTCCCCAGCTG...ACCTGGCACTTCTAGTTGTGGCATCCCAGACCAGGAGAAAGACGACTGCAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489710.1
CDS-3UTR TCA 90 bp CTGTCCTCGGCCAATCAGAACGGCTTCGATGTCTGCTTGAAGATGAAGCCTCGAATGCTGAAGGTTCTGTaGGAGCTGGAAAGCCCCAAT +
Preference number: 4 (lower is better)
Translates to: LSSANQNGFDVCLKMKPRMLKVL*ELESPN
Trigger: ATTGGGGCTTTCCAGCTCTCACAGAACCTTCAGCAT...TCGAGGCTTCATCTTCAAGCAGACATCGAAGCCGTTCTGATTGGCCGAGGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649995.1
CDS-3UTR TCA 90 bp CAATCAGAACGGCTTCGATGTCTGCTTGAAGATGAAGCCTCGATAGGCGAGTGTGGAGGGGTTGGCTACTaGGAACAGCTGAGCAGATCT +
Preference number: 4 (lower is better)
Translates to: QSERLRCLLEDEASIGECGGVGY*EQLSRS
Trigger: AGATCTGCTCAGCTGTTCTCAGTAGCCAACCCCTCC...ACACTCGCCTATCGAGGCTTCATCTTCAAGCAGACATCGAAGCCGTTCTGATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489710.1
CDS-3UTR GCA 90 bp CGATGTCTGCTTGAAGATGAAGCCTCGATAGGCGAGTGTCTTCATGATGTTGGCAGGGAAGGACACCATTaGCGCCATGGATGCGCCAAA +
Preference number: 4 (lower is better)
Translates to: RCLLEDEASIGECLHDVGREGHH*RHGCAK
Trigger: TTTGGCGCATCCATGGCGGCAATGGTGTCCTTCCCT...GCCAACATCATGAAGACACTCGCCTATCGAGGCTTCATCTTCAAGCAGACATCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649995.1
CDS-3UTR CCA 90 bp TCAGAACGGCTTCGATGTCTGCTTGAAGATGAAGCCTCGATAGGCGAGTGTCTTGTGGCTTGTCGCACGTaGCCTCAAAGTCCAGCACTA +
Preference number: 4 (lower is better)
Translates to: SERLRCLLEDEASIGECLVACRT*PQSPAL
Trigger: TAGTGCTGGACTTTGAGGCCACGTGCGACAAGCCAC...AAGACACTCGCCTATCGAGGCTTCATCTTCAAGCAGACATCGAAGCCGTTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649995.1
CDS-3UTR CCA 90 bp AAAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCGATAATGATCAGAGATaGAACCCCAACACTACAGGT +
Preference number: 4 (lower is better)
Translates to: KVSAPEGPSGQALARAQADNDQR*NPNTTG
Trigger: ACCTGTAGTGTTGGGGTTCCATCTCTGATCATTATC...GGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372259.9
CDS-3UTR CCA 90 bp CCGACTTTATTCAGTGGCACGTTCACAGCGGGGATGGGGGTAGACACAAGGTGGAGAACCTCAAAATACTaGCCCAAACAGCCCAGTAGT +
Preference number: 4 (lower is better)
Translates to: PTLFSGTFTAGMGVDTRWRTSKY*PKQPSS
Trigger: ACTACTGGGCTGTTTGGGCCAGTATTTTGAGGTTCT...CCACCTTGTGTCTACCCCCATCCCCGCTGTGAACGTGCCACTGAATAAAGTCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372259.9
CDS-3UTR TCA 90 bp GAAGCCTCGATAGGCGAGTGTCTTCATGATGTTGGCAATGTTCTTGCAGTCGTCGCTACTGAGAACAGCTaGGCAGATCTGCCATACCTG +
Preference number: 4 (lower is better)
Translates to: EASIGECLHDVGNVLAVVATENS*ADLPYL
Trigger: CAGGTATGGCAGATCTGCTCAGCTGTTCTCAGTAGC...GACGACTGCAAGAACATTGCCAACATCATGAAGACACTCGCCTATCGAGGCTTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489710.1
CDS-3UTR GCA 90 bp CCCCATCCTGTCCTCGGCCAATCAGAACGGCTTCGATGTCTGCTTGAAGATGAAAACGGCTTCGATGTCTaGTTGAAGATGAAGCCTCGA +
Preference number: 4 (lower is better)
Translates to: PHPVLGQSERLRCLLEDENGFDV*LKMKPR
Trigger: TCGAGGCTTCATCTTCAAGCAGACATCGAAGCCGTT...TTCATCTTCAAGCAGACATCGAAGCCGTTCTGATTGGCCGAGGACAGGATGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000479101.1
ENST00000489710.1
ENST00000649995.1
CDS-3UTR GCA 90 bp TGGGGACACTCTGGACACAGAGCTATGCCACTCTCCCTCTTCCCCTCTGGTGAGGATCAAATTGTTTCTTaGTGTATCTCAGGACACAGG +
Preference number: 4 (lower is better)
Translates to: WGHSGHRAMPLSLFPSGEDQIVS*CISGHR
Trigger: CCTGTGTCCTGAGATACAGCAAGAAACAATTTGATC...CTCACCAGAGGGGAAGAGGGAGAGTGGCATAGCTCTGTGTCCAGAGTGTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649995.1
CDS-3UTR CCA 90 bp TCAGAACGGCTTCGATGTCTGCTTGAAGATGAAGCCTCGATAGGCGAGTGTCTTCCCAAGTACTGGCACTaGCCTGGGAGCATGACTTTT +
Preference number: 4 (lower is better)
Translates to: SERLRCLLEDEASIGECLPKYWH*PGSMTF
Trigger: AAAAGTCATGCTCCCAGGCCAGTGCCAGTACTTGGG...AAGACACTCGCCTATCGAGGCTTCATCTTCAAGCAGACATCGAAGCCGTTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649995.1
CDS-3UTR CCA 90 bp CTGCTTGAAGATGAAGCCTCGATAGGCGAGTGTCTTCATGATGTTGGCAATGTTTTCCTCAGATGTCTCTaGGGCTCCAAGGGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: LLEDEASIGECLHDVGNVFLRCL*GSKGVS
Trigger: GCTGACCCCCTTGGAGCCCCAGAGACATCTGAGGAA...AACATTGCCAACATCATGAAGACACTCGCCTATCGAGGCTTCATCTTCAAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479101.1
CDS-3UTR CCA 90 bp GAAGATGAAGCCTCGATAGGCGAGTGTCTTCATGATGTTGGCAATGTTCTTGCACAGCCAGGGAGGGGTTaGCTACTGAGAACAGCTGAG +
Preference number: 4 (lower is better)
Translates to: EDEASIGECLHDVGNVLAQPGRG*LLRTAE
Trigger: CTCAGCTGTTCTCAGTAGCCAACCCCTCCCTGGCTG...TGCAAGAACATTGCCAACATCATGAAGACACTCGCCTATCGAGGCTTCATCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489710.1
CDS-3UTR CCA 90 bp CAGTCGTCTTTCTCCTGGTCTGGGATGCCACAACTAGAAGTGCCAGGTTATAGCCAGTCGTCTTTCTCCTaGTCTGGGATGCCACAACTA +
Preference number: 4 (lower is better)
Translates to: QSSFSWSGMPQLEVPGYSQSSFS*SGMPQL
Trigger: TAGTTGTGGCATCCCAGACCAGGAGAAAGACGACTG...GCTATAACCTGGCACTTCTAGTTGTGGCATCCCAGACCAGGAGAAAGACGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489710.1
CDS-3UTR TCA 90 bp TCAGAACGGCTTCGATGTCTGCTTGAAGATGAAGCCTCGATAGGCGAGTGTCTTCTATGTGTTGCAGGCTaGGGCCCTTGTTCATGTCTA +
Preference number: 4 (lower is better)
Translates to: SERLRCLLEDEASIGECLLCVAG*GPCSCL
Trigger: TAGACATGAACAAGGGCCTCAGCCTGCAACACATAG...AAGACACTCGCCTATCGAGGCTTCATCTTCAAGCAGACATCGAAGCCGTTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479101.1
ENST00000649995.1
CDS-3UTR TCA 90 bp CAATCAGAACGGCTTCGATGTCTGCTTGAAGATGAAGCCTCGATAGGCGAGTGTCTATGTGTTGCAGGCTaGGGCCCTTGTTCATGTCTA +
Preference number: 4 (lower is better)
Translates to: QSERLRCLLEDEASIGECLCVAG*GPCSCL
Trigger: TAGACATGAACAAGGGCCTCAGCCTGCAACACATAG...ACACTCGCCTATCGAGGCTTCATCTTCAAGCAGACATCGAAGCCGTTCTGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479101.1
ENST00000649995.1
CDS-3UTR CCA 90 bp CAATCAGAACGGCTTCGATGTCTGCTTGAAGATGAAGCCTCGATAGGCGAGTGTGAGCTCTGTACAGAATaGGGTAAGCTGTGGATGGAC +
Preference number: 4 (lower is better)
Translates to: QSERLRCLLEDEASIGECELCTE*GKLWMD
Trigger: GTCCATCCACAGCTTACCCCATTCTGTACAGAGCTC...ACACTCGCCTATCGAGGCTTCATCTTCAAGCAGACATCGAAGCCGTTCTGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649995.1
CDS-3UTR TCA 90 bp GAACGGCTTCGATGTCTGCTTGAAGATGAAGCCTCGATAGGCGAGTGTCTTCATAGGCGAGTGTCTTCATaGTGTTGGCAATGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: ERLRCLLEDEASIGECLHRRVSS*CWQCSC
Trigger: GCAAGAACATTGCCAACATCATGAAGACACTCGCCT...ATGAAGACACTCGCCTATCGAGGCTTCATCTTCAAGCAGACATCGAAGCCGTTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479101.1
ENST00000489710.1
ENST00000649995.1
CDS-3UTR TCA 90 bp ATGATGTTGGCAATGTTCTTGCAGTCGTTGAATAAAGGAGGCAGGCCGAAGGACTGTTCTTGCAGTCGTTaGATAAAGGAGGCAGGCCGA +
Preference number: 4 (lower is better)
Translates to: MMLAMFLQSLNKGGRPKDCSCSR*IKEAGR
Trigger: TCGGCCTGCCTCCTTTATTCAACGACTGCAAGAACA...GTCCTTCGGCCTGCCTCCTTTATTCAACGACTGCAAGAACATTGCCAACATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649995.1
CDS-3UTR CCA 90 bp GTCCTCGGCCAATCAGAACGGCTTCGATGTCTGCTTGAAGATGAAGCCTCGATAGCTGCTATTTCAGGCTaGGAAGTTGGTAACCGTTTT +
Preference number: 4 (lower is better)
Translates to: VLGQSERLRCLLEDEASIAAISG*EVGNRF
Trigger: AAAACGGTTACCAACTTCCCAGCCTGAAATAGCAGC...TATCGAGGCTTCATCTTCAAGCAGACATCGAAGCCGTTCTGATTGGCCGAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649995.1
CDS-3UTR CCA 90 bp GGCCAATCAGAACGGCTTCGATGTCTGCTTGAAGATGAAGCCTCGATAGGCGAGCCATTCTTCCATCTATaGTTGCTACTGAAGAACAGT +
Preference number: 4 (lower is better)
Translates to: GQSERLRCLLEDEASIGEPFFHL*LLLKNS
Trigger: ACTGTTCTTCAGTAGCAACCATAGATGGAAGAATGG...CTCGCCTATCGAGGCTTCATCTTCAAGCAGACATCGAAGCCGTTCTGATTGGCC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479101.1
CDS-3UTR CCA 90 bp GAAGATGAAGCCTCGATAGGCGAGTGTCTTCATGATGTTGGCAATGTTCTTGCACAGATCTGCCATACCTaGCAGCCTCATCAGTCTTCT +
Preference number: 4 (lower is better)
Translates to: EDEASIGECLHDVGNVLAQICHT*QPHQSS
Trigger: AGAAGACTGATGAGGCTGCCAGGTATGGCAGATCTG...TGCAAGAACATTGCCAACATCATGAAGACACTCGCCTATCGAGGCTTCATCTTC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489710.1
CDS-3UTR CAA 90 bp GGAGGCGGTGAGTGCCTGGGTCCCCCTAGCCCAGGCCCGCAATGGGAGGGGCTGGCACTTGCTGCAGGCTaGGCTGACCATCCACCATGG +
Preference number: 5 (lower is better)
Translates to: GGGECLGPPSPGPQWEGLALAAG*ADHPPW
Trigger: CCATGGTGGATGGTCAGCCAAGCCTGCAGCAAGTGC...CAGCCCCTCCCATTGCGGGCCTGGGCTAGGGGGACCCAGGCACTCACCGCCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR CAA 90 bp GGTGAGTGCCTGGGTCCCCCTAGCCCAGGCCCGCAATGGGAGGGGCTGATACTGGGGCCGGCCTATGTGTaGCAGGCTGAGGCCCTTGTT +
Preference number: 5 (lower is better)
Translates to: GECLGPPSPGPQWEGLILGPAYV*QAEALV
Trigger: AACAAGGGCCTCAGCCTGCAACACATAGGCCGGCCC...CAGTATCAGCCCCTCCCATTGCGGGCCTGGGCTAGGGGGACCCAGGCACTCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR CAA 90 bp GGTGAGTGCCTGGGTCCCCCTAGCCCAGGCCCGCAATGGGAGGGGCTGATACTGGAGGGAAGGACACCATaGCCGCCATGGATGCGCCAA +
Preference number: 5 (lower is better)
Translates to: GECLGPPSPGPQWEGLILEGRTP*PPWMRQ
Trigger: TTGGCGCATCCATGGCGGCAATGGTGTCCTTCCCTC...CAGTATCAGCCCCTCCCATTGCGGGCCTGGGCTAGGGGGACCCAGGCACTCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372257.7
CDS-3UTR CAA 90 bp GAGGAGGCGGTGAGTGCCTGGGTCCCCCTAGCCCAGGCCCGCAATGGGAGGGGCACCATCCACCATGGCTaGAATAATCCCGGTGAGCTC +
Preference number: 5 (lower is better)
Translates to: EEAVSAWVPLAQARNGRGTIHHG*NNPGEL
Trigger: GAGCTCACCGGGATTATTCAAGCCATGGTGGATGGT...GCCCCTCCCATTGCGGGCCTGGGCTAGGGGGACCCAGGCACTCACCGCCTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR CAA 90 bp AAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCCCAATGCCCGGGGTGTaGCCCCCAACTCGGGCCCAT +
Preference number: 5 (lower is better)
Translates to: KCLLQKGQVAKPLQGHKPPMPGV*PPTRAH
Trigger: ATGGGCCCGAGTTGGGGGCAACACCCCGGGCATTGG...GGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000372257.7
ENST00000649995.1
CDS-3UTR CAA 90 bp GAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCACGCCAAGGGCATGGGGCCGGCCTATGTGTaGCAGGCTGAGGCCCTTGTT +
Preference number: 5 (lower is better)
Translates to: EGPSGQALARAQAHAKGMGPAYV*QAEALV
Trigger: AACAAGGGCCTCAGCCTGCAACACATAGGCCGGCCC...CATGCCCTTGGCGTGGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
CDS-3UTR CAA 90 bp GAGGAGGCGGTGAGTGCCTGGGTCCCCCTAGCCCAGGCCCGCAATGGGAGGGGCATGTTGGCAATGTTCTaGCAGTCGTCAATGCCGCTG +
Preference number: 5 (lower is better)
Translates to: EEAVSAWVPLAQARNGRGMLAMF*QSSMPL
Trigger: CAGCGGCATTGACGACTGCAAGAACATTGCCAACAT...GCCCCTCCCATTGCGGGCCTGGGCTAGGGGGACCCAGGCACTCACCGCCTCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR CAA 90 bp GTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCACGCCAAGTGGCCAAGCCCTaGCAAGGGCACAAGCCCACG +
Preference number: 5 (lower is better)
Translates to: VCSRRAKWPSPCKGTSPRQVAKP*QGHKPT
Trigger: CGTGGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTG...GCGTGGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
CDS-3UTR CAA 90 bp GAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCACGCCAAGGGCATGCAAGTGGCCAAGCCCTaGCAAGGGCACAAGCCCACG +
Preference number: 5 (lower is better)
Translates to: EGPSGQALARAQAHAKGMQVAKP*QGHKPT
Trigger: CGTGGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTG...CATGCCCTTGGCGTGGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
CDS-3UTR CAA 90 bp AAAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCCAATGCCCGGGGTGTaGCCCCCAACTCGGGCCCAT +
Preference number: 5 (lower is better)
Translates to: KVSAPEGPSGQALARAQAPMPGV*PPTRAH
Trigger: ATGGGCCCGAGTTGGGGGCAACACCCCGGGCATTGG...GGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372257.7
ENST00000649995.1
CDS-3UTR CAA 90 bp GAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCACGCCAAGGGCATGGCACTTGCTGCAGGCTaGGCTGACCATCCACCATGG +
Preference number: 5 (lower is better)
Translates to: EGPSGQALARAQAHAKGMALAAG*ADHPPW
Trigger: CCATGGTGGATGGTCAGCCAAGCCTGCAGCAAGTGC...CATGCCCTTGGCGTGGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
CDS-3UTR CAA 90 bp GTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCACGCGCACTTGCTGCAGGCTaGGCTGACCATCCACCATGG +
Preference number: 5 (lower is better)
Translates to: VCSRRAKWPSPCKGTSPRALAAG*ADHPPW
Trigger: CCATGGTGGATGGTCAGCCAAGCCTGCAGCAAGTGC...GCGTGGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
CDS-3UTR CAA 90 bp GGGGGCACAAAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGGGGCCGGCCTATGTGTaGCAGGCTGAGGCCCTTGTT +
Preference number: 5 (lower is better)
Translates to: GGTKCLLQKGQVAKPLQGGPAYV*QAEALV
Trigger: AACAAGGGCCTCAGCCTGCAACACATAGGCCGGCCC...CCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTTTGTGCCCCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
CDS-3UTR CAA 90 bp GGTGAGTGCCTGGGTCCCCCTAGCCCAGGCCCGCAATGGGAGGGGCTGATACTGCCAATCTGCACCAAGTaGGCACAACTCTGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: GECLGPPSPGPQWEGLILPICTK*AQLCSQ
Trigger: CTGGCTGCAGAGTTGTGCCAACTTGGTGCAGATTGG...CAGTATCAGCCCCTCCCATTGCGGGCCTGGGCTAGGGGGACCCAGGCACTCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372259.9
CDS-3UTR CAA 90 bp GGGGACACTCTGGACACAGAGCTATGCCACTCTCCCTCTTCCCCTCTGGTGAGGGACCCTCTCCAGCACTaGCTGCAGGCTTGGCTGACC +
Preference number: 5 (lower is better)
Translates to: GDTLDTELCHSPSSPLVRDPLQH*LQAWLT
Trigger: GGTCAGCCAAGCCTGCAGCAAGTGCTGGAGAGGGTC...CCTCACCAGAGGGGAAGAGGGAGAGTGGCATAGCTCTGTGTCCAGAGTGTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
CDS-3UTR CAA 90 bp AAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCGGGCCGGCCTATGTGTaGCAGGCTGAGGCCCTTGTT +
Preference number: 5 (lower is better)
Translates to: KCLLQKGQVAKPLQGHKPGPAYV*QAEALV
Trigger: AACAAGGGCCTCAGCCTGCAACACATAGGCCGGCCC...GGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
CDS-3UTR CAA 90 bp CTGGGCCAAACAGCTACCCTGTCCTGCCCCATCCTGTCCTCGGCCAATCAGAACCAAGTGGCCAAGCCCTaGCAAGGGCACAAGCCCACG +
Preference number: 5 (lower is better)
Translates to: LGQTATLSCPILSSANQNQVAKP*QGHKPT
Trigger: CGTGGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTG...GTTCTGATTGGCCGAGGACAGGATGGGGCAGGACAGGGTAGCTGTTTGGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649995.1
CDS CCA 90 bp TGGGGAGGGAAGGACACCATTGCCGCCATGGATGCGCCAAAGCCGTaGGCCGCCAGCTTTCTGGTGGATATGGAGCAGAACTCCGGAACA +
Preference number: 5 (lower is better)
Translates to: WGGKDTIAAMDAPKP*AASFLVDMEQNSGT
Trigger: TGTTCCGGAGTTCTGCTCCATATCCACCAGAAAGCTGGCGGCCCACGGCTTTGGCGCATCCATGGCGGCAATGGTGTCCTTCCCTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000457571.1
ENST00000495828.1
ENST00000649995.1
CDS CCA 90 bp GGGAGGGGTTGGCTACTGAGAACAGCTGAGCAGATCTGCCATACCTaGCAGCCTCATCAGTCTTCTGGGTCCAATGCCGCTGTGGGGCCG +
Preference number: 5 (lower is better)
Translates to: GRGWLLRTAEQICHT*QPHQSSGSNAAVGP
Trigger: CGGCCCCACAGCGGCATTGGACCCAGAAGACTGATGAGGCTGCCAGGTATGGCAGATCTGCTCAGCTGTTCTCAGTAGCCAACCCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489710.1
CDS-3UTR CAA 90 bp ACCCTGTCCTGCCCCATCCTGTCCTCGGCCAATCAGAACGGCTTCGATGTCTGCGCACTTGCTGCAGGCTaGGCTGACCATCCACCATGG +
Preference number: 5 (lower is better)
Translates to: TLSCPILSSANQNGFDVCALAAG*ADHPPW
Trigger: CCATGGTGGATGGTCAGCCAAGCCTGCAGCAAGTGC...GCAGACATCGAAGCCGTTCTGATTGGCCGAGGACAGGATGGGGCAGGACAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649995.1
CDS-3UTR CAA 90 bp TGGGGACACTCTGGACACAGAGCTATGCCACTCTCCCTCTTCCCCTCTGGTGAGGACCCTCTCCAGCACTaGCTGCAGGCTTGGCTGACC +
Preference number: 5 (lower is better)
Translates to: WGHSGHRAMPLSLFPSGEDPLQH*LQAWLT
Trigger: GGTCAGCCAAGCCTGCAGCAAGTGCTGGAGAGGGTC...CTCACCAGAGGGGAAGAGGGAGAGTGGCATAGCTCTGTGTCCAGAGTGTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
CDS-3UTR CAA 90 bp GGGGGCACAAAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGTCTAGAAGTCCATTCTaGGGCCAGCAGCCCATGGCG +
Preference number: 5 (lower is better)
Translates to: GGTKCLLQKGQVAKPLQGSRSPF*GQQPMA
Trigger: CGCCATGGGCTGCTGGCCCAAGAATGGACTTCTAGA...CCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTTTGTGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
CDS-3UTR CAA 90 bp CCAAACAGCTACCCTGTCCTGCCCCATCCTGTCCTCGGCCAATCAGAACGGCTTGGGCCGGCCTATGTGTaGCAGGCTGAGGCCCTTGTT +
Preference number: 5 (lower is better)
Translates to: PNSYPVLPHPVLGQSERLGPAYV*QAEALV
Trigger: AACAAGGGCCTCAGCCTGCAACACATAGGCCGGCCC...AAGCCGTTCTGATTGGCCGAGGACAGGATGGGGCAGGACAGGGTAGCTGTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479101.1
ENST00000649995.1
CDS GCA 90 bp GTAGTGATACCTCTGGGGAGGGAAGGACACCATTGCCGCCATGGATaGGCCAAAGCCGTGGGCCGCCAGCTTTCTGGTGGATATGGAGCA +
Preference number: 5 (lower is better)
Translates to: VVIPLGREGHHCRHG*AKAVGRQLSGGYGA
Trigger: TGCTCCATATCCACCAGAAAGCTGGCGGCCCACGGCTTTGGCGCATCCATGGCGGCAATGGTGTCCTTCCCTCCCCAGAGGTATCACTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000457571.1
ENST00000495828.1
ENST00000649995.1
CDS-3UTR CAA 90 bp AAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCTCTAGAAGTCCATTCTaGGGCCAGCAGCCCATGGCG +
Preference number: 5 (lower is better)
Translates to: KCLLQKGQVAKPLQGHKPSRSPF*GQQPMA
Trigger: CGCCATGGGCTGCTGGCCCAAGAATGGACTTCTAGA...GGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
CDS-3UTR CAA 90 bp GAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCACGCCAAGGGCATGTGCAGGCTGAGGCCCTaGTTCATGTCTAGAAGTCCA +
Preference number: 5 (lower is better)
Translates to: EGPSGQALARAQAHAKGMCRLRP*FMSRSP
Trigger: TGGACTTCTAGACATGAACAAGGGCCTCAGCCTGCA...CATGCCCTTGGCGTGGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
CDS-3UTR CAA 90 bp GTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCACGCTGCAGGCTGAGGCCCTaGTTCATGTCTAGAAGTCCA +
Preference number: 5 (lower is better)
Translates to: VCSRRAKWPSPCKGTSPRCRLRP*FMSRSP
Trigger: TGGACTTCTAGACATGAACAAGGGCCTCAGCCTGCA...GCGTGGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
CDS GCA 90 bp ACCCAGCCAGGGAGGGGTTGGCTACTGAGAACAGCTGAGCAGATCTaGCATACCTGGCAGCCTCATCAGTCTTCTGGGTCCAATGCCGCT +
Preference number: 5 (lower is better)
Translates to: TQPGRGWLLRTAEQI*HTWQPHQSSGSNAA
Trigger: AGCGGCATTGGACCCAGAAGACTGATGAGGCTGCCAGGTATGGCAGATCTGCTCAGCTGTTCTCAGTAGCCAACCCCTCCCTGGCTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489710.1
CDS-3UTR CAA 90 bp TGGGGACACTCTGGACACAGAGCTATGCCACTCTCCCTCTTCCCCTCTGGTGAGTCTAGAAGTCCATTCTaGGGCCAGCAGCCCATGGCG +
Preference number: 5 (lower is better)
Translates to: WGHSGHRAMPLSLFPSGESRSPF*GQQPMA
Trigger: CGCCATGGGCTGCTGGCCCAAGAATGGACTTCTAGA...CTCACCAGAGGGGAAGAGGGAGAGTGGCATAGCTCTGTGTCCAGAGTGTCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
CDS TCA 90 bp AGTGAAGGGAACCCAGCCAGGGAGGGGTTGGCTACTGAGAACAGCTaGGCAGATCTGCCATACCTGGCAGCCTCATCAGTCTTCTGGGTC +
Preference number: 5 (lower is better)
Translates to: SEGNPAREGLATENS*ADLPYLAASSVFWV
Trigger: GACCCAGAAGACTGATGAGGCTGCCAGGTATGGCAGATCTGCTCAGCTGTTCTCAGTAGCCAACCCCTCCCTGGCTGGGTTCCCTTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489710.1
CDS CCA 90 bp CCATTGCCGCCATGGATGCGCCAAAGCCGTGGGCCGCCAGCTTTCTaGTGGATATGGAGCAGAACTCCGGAACACCACAGGGAGAAAATA +
Preference number: 5 (lower is better)
Translates to: PLPPWMRQSRGPPAF*WIWSRTPEHHREKI
Trigger: TATTTTCTCCCTGTGGTGTTCCGGAGTTCTGCTCCATATCCACCAGAAAGCTGGCGGCCCACGGCTTTGGCGCATCCATGGCGGCAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000457571.1
ENST00000495828.1
ENST00000649995.1
CDS CCA 90 bp AAAAGTAGTGATACCTCTGGGGAGGGAAGGACACCATTGCCGCCATaGATGCGCCAAAGCCGTGGGCCGCCAGCTTTCTGGTGGATATGG +
Preference number: 5 (lower is better)
Translates to: KSSDTSGEGRTPLPP*MRQSRGPPAFWWIW
Trigger: CCATATCCACCAGAAAGCTGGCGGCCCACGGCTTTGGCGCATCCATGGCGGCAATGGTGTCCTTCCCTCCCCAGAGGTATCACTACTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000457571.1
ENST00000495828.1
ENST00000649995.1
CDS CCA 90 bp CAGATCACCTACAGCCAAGTGAAGGGAACCCAGCCAGGGAGGGGTTaGCTACTGAGAACAGCTGAGCAGATCTGCCATACCTGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: QITYSQVKGTQPGRG*LLRTAEQICHTWQP
Trigger: AGGCTGCCAGGTATGGCAGATCTGCTCAGCTGTTCTCAGTAGCCAACCCCTCCCTGGCTGGGTTCCCTTCACTTGGCTGTAGGTGATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489710.1
CDS-3UTR CAA 90 bp AAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCACCATCCACCATGGCTaGAATAATCCCGGTGAGCTC +
Preference number: 5 (lower is better)
Translates to: KCLLQKGQVAKPLQGHKPTIHHG*NNPGEL
Trigger: GAGCTCACCGGGATTATTCAAGCCATGGTGGATGGT...GGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
CDS-3UTR CAA 90 bp GGGGACACTCTGGACACAGAGCTATGCCACTCTCCCTCTTCCCCTCTGGTGAGGACCATCCACCATGGCTaGAATAATCCCGGTGAGCTC +
Preference number: 5 (lower is better)
Translates to: GDTLDTELCHSPSSPLVRTIHHG*NNPGEL
Trigger: GAGCTCACCGGGATTATTCAAGCCATGGTGGATGGT...CCTCACCAGAGGGGAAGAGGGAGAGTGGCATAGCTCTGTGTCCAGAGTGTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
CDS-3UTR CAA 90 bp GGGGACACTCTGGACACAGAGCTATGCCACTCTCCCTCTTCCCCTCTGGTGAGGTGCAGGCTGAGGCCCTaGTTCATGTCTAGAAGTCCA +
Preference number: 5 (lower is better)
Translates to: GDTLDTELCHSPSSPLVRCRLRP*FMSRSP
Trigger: TGGACTTCTAGACATGAACAAGGGCCTCAGCCTGCA...CCTCACCAGAGGGGAAGAGGGAGAGTGGCATAGCTCTGTGTCCAGAGTGTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
CDS CCA 90 bp TTGCCGCCATGGATGCGCCAAAGCCGTGGGCCGCCAGCTTTCTGGTaGATATGGAGCAGAACTCCGGAACACCACAGGGAGAAAATAAGT +
Preference number: 5 (lower is better)
Translates to: LPPWMRQSRGPPAFW*IWSRTPEHHREKIS
Trigger: ACTTATTTTCTCCCTGTGGTGTTCCGGAGTTCTGCTCCATATCCACCAGAAAGCTGGCGGCCCACGGCTTTGGCGCATCCATGGCGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000457571.1
ENST00000495828.1
ENST00000649995.1
CDS-3UTR CAA 90 bp GGTGAGTGCCTGGGTCCCCCTAGCCCAGGCCCGCAATGGGAGGGGCTGATACTGGTGACAAAAATTGACTaGACGTTTGGATCTAAGAGG +
Preference number: 5 (lower is better)
Translates to: GECLGPPSPGPQWEGLILVTKID*TFGSKR
Trigger: CCTCTTAGATCCAAACGTCAAGTCAATTTTTGTCAC...CAGTATCAGCCCCTCCCATTGCGGGCCTGGGCTAGGGGGACCCAGGCACTCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS GCA 90 bp ATGTTCTTGCAGTCGTCAATGCCGCTGTGGGGCCGGCCTATGTGTTaGAGGCTGAGGCCCTTGTTCATGTCTAGAAGTCCATTCTTGGGC +
Preference number: 5 (lower is better)
Translates to: MFLQSSMPLWGRPMC*RLRPLFMSRSPFLG
Trigger: GCCCAAGAATGGACTTCTAGACATGAACAAGGGCCTCAGCCTGCAACACATAGGCCGGCCCCACAGCGGCATTGACGACTGCAAGAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000462341.1
CDS-3UTR CAA 90 bp CCCCATCCTGTCCTCGGCCAATCAGAACGGCTTCGATGTCTGCTTGAAGATGAATCTAGAAGTCCATTCTaGGGCCAGCAGCCCATGGCG +
Preference number: 5 (lower is better)
Translates to: PHPVLGQSERLRCLLEDESRSPF*GQQPMA
Trigger: CGCCATGGGCTGCTGGCCCAAGAATGGACTTCTAGA...TTCATCTTCAAGCAGACATCGAAGCCGTTCTGATTGGCCGAGGACAGGATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649995.1
CDS-3UTR CAA 90 bp AAAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCATGTTGGCAATGTTCTaGCAGTCGTCAATGCCGCTG +
Preference number: 5 (lower is better)
Translates to: KVSAPEGPSGQALARAQAMLAMF*QSSMPL
Trigger: CAGCGGCATTGACGACTGCAAGAACATTGCCAACAT...GGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR CAA 90 bp GGGGGCACAAAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGAGTGTCTTCATGATGTaGGCAATGTTCTTGCAGTCG +
Preference number: 5 (lower is better)
Translates to: GGTKCLLQKGQVAKPLQGSVFMM*AMFLQS
Trigger: CGACTGCAAGAACATTGCCAACATCATGAAGACACT...CCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTTTGTGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
CDS-3UTR CAA 90 bp CTACCCTGTCCTGCCCCATCCTGTCCTCGGCCAATCAGAACGGCTTCGATGTCTATGTTCTTGCAGTCGTaGAATAAAGGAGGCAGGCCG +
Preference number: 5 (lower is better)
Translates to: LPCPAPSCPRPIRTASMSMFLQS*NKGGRP
Trigger: CGGCCTGCCTCCTTTATTCAACGACTGCAAGAACAT...AGACATCGAAGCCGTTCTGATTGGCCGAGGACAGGATGGGGCAGGACAGGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649995.1
CDS CCA 90 bp GTATCTCAGGACACAGGCTATGTTAGGAAAAAGGCAATGCCGCTGTaGGGCCGGCCTATGTGTTGCAGGCTGAGGCCCTTGTTCATGTCT +
Preference number: 5 (lower is better)
Translates to: VSQDTGYVRKKAMPL*GRPMCCRLRPLFMS
Trigger: AGACATGAACAAGGGCCTCAGCCTGCAACACATAGGCCGGCCCCACAGCGGCATTGCCTTTTTCCTAACATAGCCTGTGTCCTGAGATAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649995.1
CDS-3UTR CAA 90 bp CCGACTTTATTCAGTGGCACGTTCACAGCGGGGATGGGGGTAGACACAAGGTGGATGTTGGCAATGTTCTaGCAGTCGTCAATGCCGCTG +
Preference number: 5 (lower is better)
Translates to: PTLFSGTFTAGMGVDTRWMLAMF*QSSMPL
Trigger: CAGCGGCATTGACGACTGCAAGAACATTGCCAACAT...CCACCTTGTGTCTACCCCCATCCCCGCTGTGAACGTGCCACTGAATAAAGTCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
CDS-3UTR CAA 90 bp GGGGACACTCTGGACACAGAGCTATGCCACTCTCCCTCTTCCCCTCTGGTGAGGAGTGTCTTCATGATGTaGGCAATGTTCTTGCAGTCG +
Preference number: 5 (lower is better)
Translates to: GDTLDTELCHSPSSPLVRSVFMM*AMFLQS
Trigger: CGACTGCAAGAACATTGCCAACATCATGAAGACACT...CCTCACCAGAGGGGAAGAGGGAGAGTGGCATAGCTCTGTGTCCAGAGTGTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000489710.1
ENST00000649995.1
CDS GCA 90 bp TATGTTAGGAAAAAGGCAATGCCGCTGTGGGGCCGGCCTATGTGTTaGAGGCTGAGGCCCTTGTTCATGTCTAGAAGTCCATTCTTGGGC +
Preference number: 5 (lower is better)
Translates to: YVRKKAMPLWGRPMC*RLRPLFMSRSPFLG
Trigger: GCCCAAGAATGGACTTCTAGACATGAACAAGGGCCTCAGCCTGCAACACATAGGCCGGCCCCACAGCGGCATTGCCTTTTTCCTAACATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649995.1
CDS CCA 90 bp TATTGCCCAGCCAGTACTTCCATACTTCCCAGAACCTCAAAATACTaGCCCAAACAGCCCAGTAGTGGGAGAGGTGCCCCAATCTGCACC +
Preference number: 5 (lower is better)
Translates to: YCPASTSILPRTSKY*PKQPSSGRGAPICT
Trigger: GGTGCAGATTGGGGCACCTCTCCCACTACTGGGCTGTTTGGGCCAGTATTTTGAGGTTCTGGGAAGTATGGAAGTACTGGCTGGGCAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372259.9
CDS-3UTR CAA 90 bp CCCCATCCTGTCCTCGGCCAATCAGAACGGCTTCGATGTCTGCTTGAAGATGAAACCATCCACCATGGCTaGAATAATCCCGGTGAGCTC +
Preference number: 5 (lower is better)
Translates to: PHPVLGQSERLRCLLEDETIHHG*NNPGEL
Trigger: GAGCTCACCGGGATTATTCAAGCCATGGTGGATGGT...TTCATCTTCAAGCAGACATCGAAGCCGTTCTGATTGGCCGAGGACAGGATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649995.1
CDS-3UTR CAA 90 bp TGGGGACACTCTGGACACAGAGCTATGCCACTCTCCCTCTTCCCCTCTGGTGAGAGTGTCTTCATGATGTaGGCAATGTTCTTGCAGTCG +
Preference number: 5 (lower is better)
Translates to: WGHSGHRAMPLSLFPSGESVFMM*AMFLQS
Trigger: CGACTGCAAGAACATTGCCAACATCATGAAGACACT...CTCACCAGAGGGGAAGAGGGAGAGTGGCATAGCTCTGTGTCCAGAGTGTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000489710.1
ENST00000649995.1
CDS-3UTR CAA 90 bp TACCCTGTCCTGCCCCATCCTGTCCTCGGCCAATCAGAACGGCTTCGATGTCTGAGTGTCTTCATGATGTaGGCAATGTTCTTGCAGTCG +
Preference number: 5 (lower is better)
Translates to: YPVLPHPVLGQSERLRCLSVFMM*AMFLQS
Trigger: CGACTGCAAGAACATTGCCAACATCATGAAGACACT...CAGACATCGAAGCCGTTCTGATTGGCCGAGGACAGGATGGGGCAGGACAGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479101.1
ENST00000489710.1
ENST00000649995.1
CDS-3UTR CAA 90 bp CCAAACAGCTACCCTGTCCTGCCCCATCCTGTCCTCGGCCAATCAGAACGGCTTGTAAAGGTGCTAGCATaGAACATCCAGAAGCATCTA +
Preference number: 5 (lower is better)
Translates to: PNSYPVLPHPVLGQSERLVKVLA*NIQKHL
Trigger: TAGATGCTTCTGGATGTTCAATGCTAGCACCTTTAC...AAGCCGTTCTGATTGGCCGAGGACAGGATGGGGCAGGACAGGGTAGCTGTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649995.1
CDS-3UTR CAA 90 bp AAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCGTGACAAAAATTGACTaGACGTTTGGATCTAAGAGG +
Preference number: 5 (lower is better)
Translates to: KCLLQKGQVAKPLQGHKPVTKID*TFGSKR
Trigger: CCTCTTAGATCCAAACGTCAAGTCAATTTTTGTCAC...GGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000649995.1
CDS-3UTR CAA 90 bp AAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGCCCATGTTGGCAATGTTCTaGCAGTCGTTGAATAAAGGA +
Preference number: 5 (lower is better)
Translates to: KCLLQKGQVAKPLQGHKPMLAMF*QSLNKG
Trigger: TCCTTTATTCAACGACTGCAAGAACATTGCCAACAT...GGGCTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649995.1
CDS-3UTR CAA 90 bp ACAAAGTGTCTGCTCCAGAAGGGCCAAGTGGCCAAGCCCTTGCAAGGGCACAAGGTAAAGGTGCTAGCATaGAACATCCAGAAGCATCTA +
Preference number: 5 (lower is better)
Translates to: TKCLLQKGQVAKPLQGHKVKVLA*NIQKHL
Trigger: TAGATGCTTCTGGATGTTCAATGCTAGCACCTTTAC...CTTGTGCCCTTGCAAGGGCTTGGCCACTTGGCCCTTCTGGAGCAGACACTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372257.7
ENST00000649995.1
CDS-3UTR CAA 90 bp CAATCAGAACGGCTTCGATGTCTGCTTGAAGATGAAGCCTCGATAGGCGAGTGTTGCAGGCTGAGGCCCTaGTTCATGTCTAGAAGTCCA +
Preference number: 5 (lower is better)
Translates to: QSERLRCLLEDEASIGECCRLRP*FMSRSP
Trigger: TGGACTTCTAGACATGAACAAGGGCCTCAGCCTGCA...ACACTCGCCTATCGAGGCTTCATCTTCAAGCAGACATCGAAGCCGTTCTGATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649995.1
CDS-3UTR CAA 90 bp GTCCTGCCCCATCCTGTCCTCGGCCAATCAGAACGGCTTCGATGTCTGCTTGAAGTGACAAAAATTGACTaGACGTTTGGATCTAAGAGG +
Preference number: 5 (lower is better)
Translates to: VLPHPVLGQSERLRCLLEVTKID*TFGSKR
Trigger: CCTCTTAGATCCAAACGTCAAGTCAATTTTTGTCAC...TTCAAGCAGACATCGAAGCCGTTCTGATTGGCCGAGGACAGGATGGGGCAGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649995.1
CDS TCA 90 bp CAGAATGGGGTAAGCTGTGGATGGACTACAGGCTGGACATACATGTaGAAGGTAGACTCAATCTCCATGGTCCGGCCATTTAGCTTTAGG +
Preference number: 5 (lower is better)
Translates to: QNGVSCGWTTGWTYM*KVDSISMVRPFSFR
Trigger: CCTAAAGCTAAATGGCCGGACCATGGAGATTGAGTCTACCTTTCACATGTATGTCCAGCCTGTAGTCCATCCACAGCTTACCCCATTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000452396.5
ENST00000456170.6
ENST00000457571.1
ENST00000495828.1
ENST00000649995.1
CDS CCA 90 bp GGCTTGAATAATCCCGGTGAGCTCTGTACAGAATGGGGTAAGCTGTaGATGGACTACAGGCTGGACATACATGTGAAAGGTAGACTCAAT +
Preference number: 5 (lower is better)
Translates to: GLNNPGELCTEWGKL*MDYRLDIHVKGRLN
Trigger: ATTGAGTCTACCTTTCACATGTATGTCCAGCCTGTAGTCCATCCACAGCTTACCCCATTCTGTACAGAGCTCACCGGGATTATTCAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000452396.5
ENST00000456170.6
ENST00000457571.1
ENST00000495828.1
ENST00000649995.1
CDS-3UTR CAA 90 bp GCCTCGATAGGCGAGTGTCTTCATGATGTTGGCAATGTTCTTGCAGTCGTCCATAGTGTCTTCATGATGTaGGCAATGTTCTTGCAGTCG +
Preference number: 5 (lower is better)
Translates to: ASIGECLHDVGNVLAVVHSVFMM*AMFLQS
Trigger: CGACTGCAAGAACATTGCCAACATCATGAAGACACT...ATGGACGACTGCAAGAACATTGCCAACATCATGAAGACACTCGCCTATCGAGGC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479101.1
CDS CCA 90 bp CAGCTCAGTTTGATCCCAAGTATTATGGTCCCGAGTATTTTCAGGTaGAGTTTTCTCTTTCTTGCTCTCAGATTTCTTGGCTTCACCGCT +
Preference number: 5 (lower is better)
Translates to: QLSLIPSIMVPSIFR*SFLFLALRFLGFTA
Trigger: AGCGGTGAAGCCAAGAAATCTGAGAGCAAGAAAGAGAAAACTCCACCTGAAAATACTCGGGACCATAATACTTGGGATCAAACTGAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462341.1
CDS-3UTR CAA 90 bp GAAGATGAAGCCTCGATAGGCGAGTGTCTTCATGATGTTGGCAATGTTCTTGCATTCTTCCATCTATGGTaGCTACTGAAGAACAGTCTG +
Preference number: 5 (lower is better)
Translates to: EDEASIGECLHDVGNVLAFFHLW*LLKNSL
Trigger: CAGACTGTTCTTCAGTAGCAACCATAGATGGAAGAA...TGCAAGAACATTGCCAACATCATGAAGACACTCGCCTATCGAGGCTTCATCTTC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479101.1
CDS GCA 72 bp CCTCTGGGGAGGGAAGGACACCATTGCCGCCATGGATaGGCCAAAGCCGTGGGCCGCCAGCTTTCTGGTGGA +
Preference number: 6 (lower is better)
Translates to: PLGREGHHCRHG*AKAVGRQLSGG
Trigger: TCCACCAGAAAGCTGGCGGCCCACGGCTTTGGCGCATCCATGGCGGCAATGGTGTCCTTCCCTCCCCAGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000457571.1
ENST00000495828.1
ENST00000649995.1
CDS CAA 90 bp GCAATGCCGCTGTGGGGCCGGCCTATGTGTTGCAGGCTGAGGCCCTaGTTCATGTCTAGAAGTCCATTCTTGGGCCAGCAGCCCATGGCG +
Preference number: 6 (lower is better)
Translates to: AMPLWGRPMCCRLRP*FMSRSPFLGQQPMA
Trigger: CGCCATGGGCTGCTGGCCCAAGAATGGACTTCTAGACATGAACAAGGGCCTCAGCCTGCAACACATAGGCCGGCCCCACAGCGGCATTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649995.1
CDS GCA 72 bp AAAGTAGTGATACCTCTGGGGAGGGAAGGACACCATTaGCGCCATGGATGCGCCAAAGCCGTGGGCCGCCAG +
Preference number: 6 (lower is better)
Translates to: KVVIPLGREGHH*RHGCAKAVGRQ
Trigger: CTGGCGGCCCACGGCTTTGGCGCATCCATGGCGGCAATGGTGTCCTTCCCTCCCCAGAGGTATCACTACTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000457571.1
ENST00000495828.1
ENST00000649995.1
CDS GCA 72 bp CCCAAACAGCCCAGTAGTGGGAGAGGTGCCCCAATCTaGACCAAGTTGGCACAACTCTGCAGCCAGGGCACC +
Preference number: 6 (lower is better)
Translates to: PKQPSSGRGAPI*TKLAQLCSQGT
Trigger: GGTGCCCTGGCTGCAGAGTTGTGCCAACTTGGTGCAGATTGGGGCACCTCTCCCACTACTGGGCTGTTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372259.9
CDS CCA 72 bp TGGATGCGCCAAAGCCGTGGGCCGCCAGCTTTCTGGTaGATATGGAGCAGAACTCCGGAACACCACAGGGAG +
Preference number: 6 (lower is better)
Translates to: WMRQSRGPPAFW*IWSRTPEHHRE
Trigger: CTCCCTGTGGTGTTCCGGAGTTCTGCTCCATATCCACCAGAAAGCTGGCGGCCCACGGCTTTGGCGCATCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000457571.1
ENST00000495828.1
ENST00000649995.1
CDS CCA 72 bp CCATGGATGCGCCAAAGCCGTGGGCCGCCAGCTTTCTaGTGGATATGGAGCAGAACTCCGGAACACCACAGG +
Preference number: 6 (lower is better)
Translates to: PWMRQSRGPPAF*WIWSRTPEHHR
Trigger: CCTGTGGTGTTCCGGAGTTCTGCTCCATATCCACCAGAAAGCTGGCGGCCCACGGCTTTGGCGCATCCATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000457571.1
ENST00000495828.1
ENST00000649995.1
CDS CAA 90 bp TCAATGCCGCTGTGGGGCCGGCCTATGTGTTGCAGGCTGAGGCCCTaGTTCATGTCTAGAAGTCCATTCTTGGGCCAGCAGCCCATGGCG +
Preference number: 6 (lower is better)
Translates to: SMPLWGRPMCCRLRP*FMSRSPFLGQQPMA
Trigger: CGCCATGGGCTGCTGGCCCAAGAATGGACTTCTAGACATGAACAAGGGCCTCAGCCTGCAACACATAGGCCGGCCCCACAGCGGCATTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000462341.1
CDS CCA 72 bp AAGGACACCATTGCCGCCATGGATGCGCCAAAGCCGTaGGCCGCCAGCTTTCTGGTGGATATGGAGCAGAAC +
Preference number: 6 (lower is better)
Translates to: KDTIAAMDAPKP*AASFLVDMEQN
Trigger: GTTCTGCTCCATATCCACCAGAAAGCTGGCGGCCCACGGCTTTGGCGCATCCATGGCGGCAATGGTGTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000457571.1
ENST00000495828.1
ENST00000649995.1
CDS CAA 72 bp AAAAGTAGTGATACCTCTGGGGAGGGAAGGACACCATaGCCGCCATGGATGCGCCAAAGCCGTGGGCCGCCA +
Preference number: 6 (lower is better)
Translates to: KSSDTSGEGRTP*PPWMRQSRGPP
Trigger: TGGCGGCCCACGGCTTTGGCGCATCCATGGCGGCAATGGTGTCCTTCCCTCCCCAGAGGTATCACTACTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000457571.1
ENST00000495828.1
ENST00000649995.1
CDS CAA 90 bp CCAGCACTAAAAAGTAGTGATACCTCTGGGGAGGGAAGGACACCATaGCCGCCATGGATGCGCCAAAGCCGTGGGCCGCCAGCTTTCTGG +
Preference number: 6 (lower is better)
Translates to: PALKSSDTSGEGRTP*PPWMRQSRGPPAFW
Trigger: CCAGAAAGCTGGCGGCCCACGGCTTTGGCGCATCCATGGCGGCAATGGTGTCCTTCCCTCCCCAGAGGTATCACTACTTTTTAGTGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000457571.1
ENST00000495828.1
ENST00000649995.1
CDS TCA 72 bp AACCCAGCCAGGGAGGGGTTGGCTACTGAGAACAGCTaGGCAGATCTGCCATACCTGGCAGCCTCATCAGTC +
Preference number: 6 (lower is better)
Translates to: NPAREGLATENS*ADLPYLAASSV
Trigger: GACTGATGAGGCTGCCAGGTATGGCAGATCTGCTCAGCTGTTCTCAGTAGCCAACCCCTCCCTGGCTGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489710.1
CDS GCA 72 bp GGGAGGGGTTGGCTACTGAGAACAGCTGAGCAGATCTaGCATACCTGGCAGCCTCATCAGTCTTCTGGGTCC +
Preference number: 6 (lower is better)
Translates to: GRGWLLRTAEQI*HTWQPHQSSGS
Trigger: GGACCCAGAAGACTGATGAGGCTGCCAGGTATGGCAGATCTGCTCAGCTGTTCTCAGTAGCCAACCCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489710.1
CDS CCA 72 bp GACACAGGCTATGTTAGGAAAAAGGCAATGCCGCTGTaGGGCCGGCCTATGTGTTGCAGGCTGAGGCCCTTG +
Preference number: 6 (lower is better)
Translates to: DTGYVRKKAMPL*GRPMCCRLRPL
Trigger: CAAGGGCCTCAGCCTGCAACACATAGGCCGGCCCCACAGCGGCATTGCCTTTTTCCTAACATAGCCTGTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649995.1
CDS CAA 72 bp CTGTGGGGCCGGCCTATGTGTTGCAGGCTGAGGCCCTaGTTCATGTCTAGAAGTCCATTCTTGGGCCAGCAG +
Preference number: 6 (lower is better)
Translates to: LWGRPMCCRLRP*FMSRSPFLGQQ
Trigger: CTGCTGGCCCAAGAATGGACTTCTAGACATGAACAAGGGCCTCAGCCTGCAACACATAGGCCGGCCCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000456170.6
ENST00000462341.1
ENST00000649995.1
CDS CCA 72 bp CGCCAAAGCCGTGGGCCGCCAGCTTTCTGGTGGATATaGAGCAGAACTCCGGAACACCACAGGGAGAAAATA +
Preference number: 6 (lower is better)
Translates to: RQSRGPPAFWWI*SRTPEHHREKI
Trigger: TATTTTCTCCCTGTGGTGTTCCGGAGTTCTGCTCCATATCCACCAGAAAGCTGGCGGCCCACGGCTTTGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372257.7
ENST00000457571.1
ENST00000495828.1
ENST00000649995.1
CDS CCA 72 bp TACAGCCAAGTGAAGGGAACCCAGCCAGGGAGGGGTTaGCTACTGAGAACAGCTGAGCAGATCTGCCATACC +
Preference number: 6 (lower is better)
Translates to: YSQVKGTQPGRG*LLRTAEQICHT
Trigger: GGTATGGCAGATCTGCTCAGCTGTTCTCAGTAGCCAACCCCTCCCTGGCTGGGTTCCCTTCACTTGGCTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489710.1
CDS CCA 72 bp GCCAGTACTTCCATACTTCCCAGAACCTCAAAATACTaGCCCAAACAGCCCAGTAGTGGGAGAGGTGCCCCA +
Preference number: 6 (lower is better)
Translates to: ASTSILPRTSKY*PKQPSSGRGAP
Trigger: TGGGGCACCTCTCCCACTACTGGGCTGTTTGGGCCAGTATTTTGAGGTTCTGGGAAGTATGGAAGTACTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372259.9
CDS CCA 72 bp TCATGTCTAGAAGTCCATTCTTGGGCCAGCAGCCCATaGCGAAGCTGTAAGCCAGCTCAGTTTGATCCCAAG +
Preference number: 6 (lower is better)
Translates to: SCLEVHSWASSP*RSCKPAQFDPK
Trigger: CTTGGGATCAAACTGAGCTGGCTTACAGCTTCGCCATGGGCTGCTGGCCCAAGAATGGACTTCTAGACATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462341.1
CDS TCA 72 bp TCTCTTTCTTGCTCTCAGATTTCTTGGCTTCACCGCTaGGTCAGAGGGGCCTTGGGGACAGTGAAGTTTCTG +
Preference number: 6 (lower is better)
Translates to: SLSCSQISWLHR*VRGALGTVKFL
Trigger: CAGAAACTTCACTGTCCCCAAGGCCCCTCTGACTCAGCGGTGAAGCCAAGAAATCTGAGAGCAAGAAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462341.1
CDS CCA 72 bp TTTCAGATTAATCCACTGCTTGAAGTAATCCGCCACTaGCAAGCCCAAGTACTGGCACTGGCCTGGGAGCAT +
Preference number: 6 (lower is better)
Translates to: FQINPLLEVIRH*QAQVLALAWEH
Trigger: ATGCTCCCAGGCCAGTGCCAGTACTTGGGCTTGCCAGTGGCGGATTACTTCAAGCAGTGGATTAATCTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000452396.5
ENST00000456170.6
ENST00000495828.1
ENST00000649995.1
CDS CCA 72 bp AATCCCGGTGAGCTCTGTACAGAATGGGGTAAGCTGTaGATGGACTACAGGCTGGACATACATGTGAAAGGT +
Preference number: 6 (lower is better)
Translates to: NPGELCTEWGKL*MDYRLDIHVKG
Trigger: ACCTTTCACATGTATGTCCAGCCTGTAGTCCATCCACAGCTTACCCCATTCTGTACAGAGCTCACCGGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000452396.5
ENST00000456170.6
ENST00000457571.1
ENST00000495828.1
ENST00000649995.1
CDS TCA 72 bp GTAAGCTGTGGATGGACTACAGGCTGGACATACATGTaGAAGGTAGACTCAATCTCCATGGTCCGGCCATTT +
Preference number: 6 (lower is better)
Translates to: VSCGWTTGWTYM*KVDSISMVRPF
Trigger: AAATGGCCGGACCATGGAGATTGAGTCTACCTTTCACATGTATGTCCAGCCTGTAGTCCATCCACAGCTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000452396.5
ENST00000456170.6
ENST00000457571.1
ENST00000495828.1
ENST00000649995.1
CDS GCA 72 bp GTGGCATTAATCCCAACACAAAGATTTGTGACAATGTaGCCAAGTGCCAGCCTCTATGTCCAGTTGCTCAGA +
Preference number: 6 (lower is better)
Translates to: VALIPTQRFVTM*PSASLYVQLLR
Trigger: TCTGAGCAACTGGACATAGAGGCTGGCACTTGGGCACATTGTCACAAATCTTTGTGTTGGGATTAATGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372259.9
CDS CAA 90 bp AGCATGACTTTTAAGTCCCAGTCTCCACAGGTGACAAAAATTGACTaGACGTTTGGATCTAAGAGGCCTTCCTTCGCCATCCATTCATCG +
Preference number: 6 (lower is better)
Translates to: SMTFKSQSPQVTKID*TFGSKRPSFAIHSS
Trigger: CGATGAATGGATGGCGAAGGAAGGCCTCTTAGATCCAAACGTCAAGTCAATTTTTGTCACCTGTGGAGACTGGGACTTAAAAGTCATGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000452396.5
ENST00000456170.6
ENST00000495828.1
ENST00000649995.1
CDS TCA 72 bp CATCCATCTAGCCATTCTTCCATCTATGGTTGCTACTaGAGAACAGTCTGGTGTCTGGCAAGAACCAATTCC +
Preference number: 6 (lower is better)
Translates to: HPSSHSSIYGCY*RTVWCLARTNS
Trigger: GGAATTGGTTCTTGCCAGACACCAGACTGTTCTTCAGTAGCAACCATAGATGGAAGAATGGCTAGATGGATG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479101.1
CDS CAA 72 bp TTTAAGTCCCAGTCTCCACAGGTGACAAAAATTGACTaGACGTTTGGATCTAAGAGGCCTTCCTTCGCCATC +
Preference number: 6 (lower is better)
Translates to: FKSQSPQVTKID*TFGSKRPSFAI
Trigger: GATGGCGAAGGAAGGCCTCTTAGATCCAAACGTCAAGTCAATTTTTGTCACCTGTGGAGACTGGGACTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000372257.7
ENST00000372259.9
ENST00000452396.5
ENST00000456170.6
ENST00000457571.1
ENST00000495828.1
ENST00000649995.1
CDS CAA 72 bp AAAATCGAGCTGCTCCAGTCTGTAAAGGTGCTAGCATaGAACATCCAGAAGCATCTCTCCTTACTTCGAAGA +
Preference number: 6 (lower is better)
Translates to: KIELLQSVKVLA*NIQKHLSLLRR
Trigger: TCTTCGAAGTAAGGAGAGATGCTTCTGGATGTTCAATGCTAGCACCTTTACAGACTGGAGCAGCTCGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457571.1
CDS CAA 90 bp AATACGAAGAAAATCGAGCTGCTCCAGTCTGTAAAGGTGCTAGCATaGAACATCCAGAAGCATCTAAAACTCTCCTTACTTCGAAGATGC +
Preference number: 6 (lower is better)
Translates to: NTKKIELLQSVKVLA*NIQKHLKLSLLRRC
Trigger: GCATCTTCGAAGTAAGGAGAGTTTTAGATGCTTCTGGATGTTCAATGCTAGCACCTTTACAGACTGGAGCAGCTCGATTTTCTTCGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372257.7
ENST00000649995.1
CDS CAA 72 bp AAAATCGAGCTGCTCCAGTCTGTAAAGGTGCTAGCATaGAACATCCAGAAGCATCTAAAACTCTCCTTACTT +
Preference number: 6 (lower is better)
Translates to: KIELLQSVKVLA*NIQKHLKLSLL
Trigger: AAGTAAGGAGAGTTTTAGATGCTTCTGGATGTTCAATGCTAGCACCTTTACAGACTGGAGCAGCTCGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372257.7
ENST00000649995.1