Pregenerated sensors for ERH (Homo sapiens)
Ensembl gene IDs: ENSG00000100632Ensembl transcript IDs: ENST00000555373.1
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | AGTATCAGGCACATAATTAGCTCCCAATACCATAAATCACCTCAAACAGACAGAACCAGCAAAATGGTGTaGGACATCGCGCCAAACTCT | + |
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Preference number: 4 (lower is better) Translates to: SIRHIISSQYHKSPQTDRTSKMV*DIAPNS Trigger: AGAGTTTGGCGCGATGTCTCACACCATTTTGCTGGT...TCTGTCTGTTTGAGGTGATTTATGGTATTGGGAGCTAATTATGTGCCTGATACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555373.1 |
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| CDS-3UTR TCA 90 bp | GCAAATGCAAAGATCAGTATCAGGCACATAATTAGCTCCCAATACCATAAATCAGGCACATGGAACTTCTaGATTAGGATCCTTTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ANAKISIRHIISSQYHKSGTWNF*IRILSG Trigger: TCCAGAAAGGATCCTAATTCAGAAGTTCCATGTGCC...TGATTTATGGTATTGGGAGCTAATTATGTGCCTGATACTGATCTTTGCATTTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555373.1 |
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| CDS-3UTR GCA 90 bp | GCAAATGCAAAGATCAGTATCAGGCACATAATTAGCTCCCAATACCATAAATCACCTTTGGCTTTATGTTaGCAATCTCTTATTTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: ANAKISIRHIISSQYHKSPLALC*QSLISV Trigger: TACAGAAATAAGAGATTGGCAACATAAAGCCAAAGG...TGATTTATGGTATTGGGAGCTAATTATGTGCCTGATACTGATCTTTGCATTTGC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555373.1 |
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| CDS-3UTR GCA 90 bp | TATGCAAATGCAAAGATCAGTATCAGGCACATAATTAGCTCCCAATACCATAAATATACACTATGCAAATaGAAAGATCAGTATCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: YANAKISIRHIISSQYHKYTLCK*KDQYQA Trigger: TGCCTGATACTGATCTTTGCATTTGCATAGTGTATA...TTTATGGTATTGGGAGCTAATTATGTGCCTGATACTGATCTTTGCATTTGCATA 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555373.1 |
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| CDS-3UTR CAA 90 bp | CACATAATTAGCTCCCAATACCATAAATCACCTCAAACAGACAGAAAAGCAATAAAGATAAAAGACATGTaGGCTAATACTTACACCAGG | + |
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Preference number: 5 (lower is better) Translates to: HIISSQYHKSPQTDRKAIKIKDM*ANTYTR Trigger: CCTGGTGTAAGTATTAGCCAACATGTCTTTTATCTT...TATTGCTTTTCTGTCTGTTTGAGGTGATTTATGGTATTGGGAGCTAATTATGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555373.1 |
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