RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ERGIC3 (Homo sapiens)

Ensembl gene IDs: ENSG00000125991

Ensembl transcript IDs: ENST00000279052.10, ENST00000348547.7, ENST00000357394.8, ENST00000411577.5, ENST00000413587.5, ENST00000416206.5, ENST00000438317.5, ENST00000442139.5, ENST00000447986.5, ENST00000451605.1, ENST00000461043.6, ENST00000465298.1, ENST00000475211.1, ENST00000482338.5, ENST00000486268.5, ENST00000488384.1, ENST00000488935.5, ENST00000489071.5, ENST00000496172.5, ENST00000640748.1

Found 221 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CAA 90 bp CAGTCATCTCCATCTCAAGTCATTCATTTGCTCAGGCTGAAAGCGTaGGAATCAACAACCATGACTTTGCTCTCCTCCACTCCACATCCA +
Preference number: 2 (lower is better)
Translates to: QSSPSQVIHLLRLKA*ESTTMTLLSSTPHP
Trigger: TGGATGTGGAGTGGAGGAGAGCAAAGTCATGGTTGTTGATTCCAACGCTTTCAGCCTGAGCAAATGAATGACTTGAGATGGAGATGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411577.5
ENST00000438317.5
3UTR CAA 90 bp TCCCAAGCTCTTCTCCTCCAGTCATCTCCATCTCAAGTCATTCATTaGCTCAGGCTGAAAGCGTTGGAATCAACAACCATGACTTTGCTC +
Preference number: 2 (lower is better)
Translates to: SQALLLQSSPSQVIH*LRLKALESTTMTLL
Trigger: GAGCAAAGTCATGGTTGTTGATTCCAACGCTTTCAGCCTGAGCAAATGAATGACTTGAGATGGAGATGACTGGAGGAGAAGAGCTTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438317.5
3UTR-3UTR CCA 90 bp CTGAAAGCGTTGGAATCAACAACCATGACTTTGCTCTCCTCCACTCCACATCCATATAGCAAATTATGTTaGTTCCACTGGTGTCCTGCA +
Preference number: 2 (lower is better)
Translates to: LKALESTTMTLLSSTPHPYSKLC*FHWCPA
Trigger: TGCAGGACACCAGTGGAACCAACATAATTTGCTATA...TGGATGTGGAGTGGAGGAGAGCAAAGTCATGGTTGTTGATTCCAACGCTTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411577.5
ENST00000438317.5
3UTR-3UTR CCA 90 bp TTTTGGAGTACTTTGTTACACAGCAGTGGATATCCAATAGCCACTCCTCCCTCCTATAGCAAATTATGTTaGTTCCACTGGTGTCCTGCA +
Preference number: 2 (lower is better)
Translates to: FWSTLLHSSGYPIATPPSYSKLC*FHWCPA
Trigger: TGCAGGACACCAGTGGAACCAACATAATTTGCTATA...GGAGGGAGGAGTGGCTATTGGATATCCACTGCTGTGTAACAAAGTACTCCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411577.5
3UTR-3UTR CAA 90 bp TTGGAGTACTTTGTTACACAGCAGTGGATATCCAATAGCCACTCCTCCCTCCCATCAACAACCATGACTTaGCTCTCCTCCACTCCACAT +
Preference number: 3 (lower is better)
Translates to: LEYFVTQQWISNSHSSLPSTTMT*LSSTPH
Trigger: ATGTGGAGTGGAGGAGAGCAAAGTCATGGTTGTTGA...TGGGAGGGAGGAGTGGCTATTGGATATCCACTGCTGTGTAACAAAGTACTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411577.5
3UTR-3UTR CAA 90 bp TTTTGGAGTACTTTGTTACACAGCAGTGGATATCCAATAGCCACTCCTCCCTCCTCTCAAGTCATTCATTaGCTCAGGCTGAAAGCGTTG +
Preference number: 3 (lower is better)
Translates to: FWSTLLHSSGYPIATPPSSQVIH*LRLKAL
Trigger: CAACGCTTTCAGCCTGAGCAAATGAATGACTTGAGA...GGAGGGAGGAGTGGCTATTGGATATCCACTGCTGTGTAACAAAGTACTCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411577.5
CDS-3UTR TCA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGCGCCCCCGCAGGTCTTaGCCCGGAAGTCCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: LSQSINRFINLGLGLTEERPRRS*PGSPPK
Trigger: CTTTGGAGGACTTCCGGGTCAAGACCTGCGGGGGCG...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000640748.1
CDS-3UTR TCA 90 bp TTGGAGTACTTTGTTACACAGCAGTGGATATCCAATAGCCACTCCTCCCTCCCACGCCCCCGCAGGTCTTaGCCCGGAAGTCCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: LEYFVTQQWISNSHSSLPRPRRS*PGSPPK
Trigger: CTTTGGAGGACTTCCGGGTCAAGACCTGCGGGGGCG...TGGGAGGGAGGAGTGGCTATTGGATATCCACTGCTGTGTAACAAAGTACTCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411577.5
CDS-3UTR TCA 90 bp TTTGCTCAGGCTGAAAGCGTTGGAATCAACAACCATGACTTTGCTCTCCTCCACCGCCCCCGCAGGTCTTaGCCCGGAAGTCCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: FAQAESVGINNHDFALLHRPRRS*PGSPPK
Trigger: CTTTGGAGGACTTCCGGGTCAAGACCTGCGGGGGCG...GTGGAGGAGAGCAAAGTCATGGTTGTTGATTCCAACGCTTTCAGCCTGAGCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411577.5
ENST00000438317.5
CDS-3UTR CCA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGCCTCAGTACCTGGGGTaGGAGGGGAGCCTCTCCGTC +
Preference number: 4 (lower is better)
Translates to: LSQSINRFINLGLGLTEEPQYLG*EGSLSV
Trigger: GACGGAGAGGCTCCCCTCCCACCCCAGGTACTGAGG...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000451605.1
CDS-3UTR TCA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGATGCCGCTCAGCCTCTaGGCTCACGGGGATGCCATC +
Preference number: 4 (lower is better)
Translates to: LSQSINRFINLGLGLTEEMPLSL*AHGDAI
Trigger: GATGGCATCCCCGTGAGCTCAGAGGCTGAGCGGCAT...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000348547.7
ENST00000357394.8
CDS-3UTR TCA 90 bp CCTCCAGTCATCTCCATCTCAAGTCATTCATTTGCTCAGGCTGAAAGCGTTGGAATGCCGCTCAGCCTCTaGGCTCACGGGGATGCCATC +
Preference number: 4 (lower is better)
Translates to: PPVISISSHSFAQAESVGMPLSL*AHGDAI
Trigger: GATGGCATCCCCGTGAGCTCAGAGGCTGAGCGGCAT...TCCAACGCTTTCAGCCTGAGCAAATGAATGACTTGAGATGGAGATGACTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411577.5
ENST00000438317.5
CDS-3UTR TCA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGCCTGCATCTTCTGGCTaGAGCCCTCTCGCCGGCACT +
Preference number: 4 (lower is better)
Translates to: LSQSINRFINLGLGLTEEPASSG*SPLAGT
Trigger: AGTGCCGGCGAGAGGGCTTCAGCCAGAAGATGCAGG...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000640748.1
CDS-3UTR TCA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGAGGCTTGGGGCGCAGTaGCATTGGTGTGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LSQSINRFINLGLGLTEERLGAQ*HWCGPG
Trigger: CCCTGGACCACACCAATGTCACTGCGCCCCAAGCCT...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000451605.1
ENST00000640748.1
CDS-3UTR TCA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGGATGCACCTCCGTGGTaGGGTAATACTGCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: LSQSINRFINLGLGLTEEDAPPW*GNTAAR
Trigger: CCGAGCTGCAGTATTACCTCACCACGGAGGTGCATC...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348547.7
ENST00000357394.8
CDS-3UTR TCA 90 bp TTGCTCAGGCTGAAAGCGTTGGAATCAACAACCATGACTTTGCTCTCCTCCACTGATGCACCTCCGTGGTaGGGTAATACTGCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: LLRLKALESTTMTLLSSTDAPPW*GNTAAR
Trigger: CCGAGCTGCAGTATTACCTCACCACGGAGGTGCATC...AGTGGAGGAGAGCAAAGTCATGGTTGTTGATTCCAACGCTTTCAGCCTGAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411577.5
ENST00000438317.5
CDS-3UTR TCA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGCTGTCAGGAAGTGGGTaGAGGACCTGTGCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: LSQSINRFINLGLGLTEELSGSG*RTCASP
Trigger: CGGAGAAGCACAGGTCCTTCACCCACTTCCTGACAG...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000451605.1
CDS-3UTR GCA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGACGTGCACATGGGACTaGTGGAAGCTCTTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LSQSINRFINLGLGLTEETCTWD*WKLFPG
Trigger: CCCTGGGAAGAGCTTCCAGCAGTCCCATGTGCACGT...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000640748.1
CDS-3UTR CCA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGTGCACATGGGACTGCTaGAAGCTCTTCCCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: LSQSINRFINLGLGLTEECTWDC*KLFPGA
Trigger: TGCCCCTGGGAAGAGCTTCCAGCAGTCCCATGTGCA...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000640748.1
CDS-3UTR CCA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGTTTGTCCTCAGTACCTaGGGTGGGAGGGGAGCCTCT +
Preference number: 4 (lower is better)
Translates to: LSQSINRFINLGLGLTEEFVLST*GGRGAS
Trigger: AGAGGCTCCCCTCCCACCCCAGGTACTGAGGACAAA...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000451605.1
CDS-3UTR TCA 90 bp ATCTCCATCTCAAGTCATTCATTTGCTCAGGCTGAAAGCGTTGGAATCAACAACATGCCGCTCAGCCTCTaGGCTCACGGGGATGCCATC +
Preference number: 4 (lower is better)
Translates to: ISISSHSFAQAESVGINNMPLSL*AHGDAI
Trigger: GATGGCATCCCCGTGAGCTCAGAGGCTGAGCGGCAT...GTTGTTGATTCCAACGCTTTCAGCCTGAGCAAATGAATGACTTGAGATGGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411577.5
ENST00000438317.5
CDS-3UTR TCA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGCTGGATGGCTCGTGCTaGGTGGTAGATGAGCGAATC +
Preference number: 4 (lower is better)
Translates to: LSQSINRFINLGLGLTEELDGSC*VVDERI
Trigger: GATTCGCTCATCTACCACTCAGCACGAGCCATCCAG...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000451605.1
CDS-3UTR TCA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGGTGCTGAGTGGTAGATaGGCGAATACTCCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LSQSINRFINLGLGLTEEVLSGR*ANTPGR
Trigger: CCTTCCCGGAGTATTCGCTCATCTACCACTCAGCAC...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640748.1
CDS-3UTR GCA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGTGTTCCACATCCAGCTaGTGTTCTCCGGCCACATCC +
Preference number: 4 (lower is better)
Translates to: LSQSINRFINLGLGLTEECSTSS*CSPATS
Trigger: GGATGTGGCCGGAGAACAGCAGCTGGATGTGGAACA...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348547.7
ENST00000357394.8
CDS-3UTR GCA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGACTTTCCCAAGCTCATaGCGCTCAGCCTCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: LSQSINRFINLGLGLTEETFPSS*RSASEL
Trigger: GAGCTCAGAGGCTGAGCGGCATGAGCTTGGGAAAGT...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348547.7
ENST00000357394.8
CDS-3UTR GCA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGGCCTCTACGGCGATATaGCTCCCGCACATCTTCACA +
Preference number: 4 (lower is better)
Translates to: LSQSINRFINLGLGLTEEASTAI*LPHIFT
Trigger: TGTGAAGATGTGCGGGAGGCATATCGCCGTAGAGGC...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000640748.1
CDS-3UTR GCA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGCCCTCTCGCCGGCACTaGTCAATAGTATCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: LSQSINRFINLGLGLTEEPSRRH*SIVSGF
Trigger: GAACCCAGATACTATTGAGCAGTGCCGGCGAGAGGG...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000640748.1
CDS-3UTR GCA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGCCAGGGGGTTCACAATaGCTGGATAGTCCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: LSQSINRFINLGLGLTEEPGGSQ*LDSPPQ
Trigger: TTGGGGAGGACTATCCAGGCATTGTGAACCCCCTGG...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000640748.1
CDS-3UTR GCA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGTGGGTGAAGGACCTGTaGTTCTCCGTCAGCTTCACC +
Preference number: 4 (lower is better)
Translates to: LSQSINRFINLGLGLTEEWVKDL*FSVSFT
Trigger: GGTGAAGCTGACGGAGAAGCACAGGTCCTTCACCCA...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000451605.1
CDS-3UTR CCA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGCGCCCAACAGCCCATTaGCAACCTTCTCATGTCTGG +
Preference number: 4 (lower is better)
Translates to: LSQSINRFINLGLGLTEERPTAH*QPSHVW
Trigger: CCAGACATGAGAAGGTTGCCAATGGGCTGTTGGGCG...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000451605.1
ENST00000640748.1
CDS-3UTR TCA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGCTGGATGGCTCGTGCTaGGTGGTAGATGAGCGAATA +
Preference number: 4 (lower is better)
Translates to: LSQSINRFINLGLGLTEELDGSC*VVDERI
Trigger: TATTCGCTCATCTACCACTCAGCACGAGCCATCCAG...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640748.1
CDS-3UTR GCA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGTCCACAGCATGTACGTaGACATGGGACTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LSQSINRFINLGLGLTEESTACT*TWDCWK
Trigger: CTTCCAGCAGTCCCATGTGCACGTACATGCTGTGGA...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357394.8
CDS-3UTR CCA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGTTCCCAGGGGCAAAGTaGAAGTTTCCGGCCACCTTA +
Preference number: 4 (lower is better)
Translates to: LSQSINRFINLGLGLTEEFPGAK*KFPATL
Trigger: TAAGGTGGCCGGAAACTTCCACTTTGCCCCTGGGAA...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000640748.1
CDS-3UTR CCA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGTCATGGACGTGCACATaGGACTGCTGGAAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: LSQSINRFINLGLGLTEESWTCT*DCWKLF
Trigger: GAAGAGCTTCCAGCAGTCCCATGTGCACGTCCATGA...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348547.7
ENST00000640748.1
CDS-3UTR CCA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGGCAGTGACATTGGTGTaGTCCAGGGGGTTCACAATG +
Preference number: 4 (lower is better)
Translates to: LSQSINRFINLGLGLTEEAVTLV*SRGFTM
Trigger: CATTGTGAACCCCCTGGACCACACCAATGTCACTGC...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000640748.1
CDS-3UTR CCA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGAACATCATGGAGGCTTaGGGCGCAGTGACATTGGTG +
Preference number: 4 (lower is better)
Translates to: LSQSINRFINLGLGLTEENIMEA*GAVTLV
Trigger: CACCAATGTCACTGCGCCCCAAGCCTCCATGATGTT...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000451605.1
ENST00000640748.1
CDS-3UTR CCA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGACACCTGTCAGGAAGTaGGTGAAGGACCTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: LSQSINRFINLGLGLTEETPVRK*VKDLCF
Trigger: GAAGCACAGGTCCTTCACCCACTTCCTGACAGGTGT...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000451605.1
CDS-3UTR CCA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGGCATGTACGTGCACATaGGACTGCTGGAAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: LSQSINRFINLGLGLTEEACTCT*DCWKLF
Trigger: GAAGAGCTTCCAGCAGTCCCATGTGCACGTACATGC...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357394.8
CDS-3UTR TCA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGATAGTCCTCCCCAAATaGCAGGTGCTGGATGTAGTG +
Preference number: 4 (lower is better)
Translates to: LSQSINRFINLGLGLTEEIVLPK*QVLDVV
Trigger: CACTACATCCAGCACCTGTCATTTGGGGAGGACTAT...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000640748.1
CDS-3UTR TCA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGCTGGTCACAGAGAACTaGTTTGTCCTCAGTACCTGG +
Preference number: 4 (lower is better)
Translates to: LSQSINRFINLGLGLTEELVTEN*FVLSTW
Trigger: CCAGGTACTGAGGACAAATCAGTTCTCTGTGACCAG...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451605.1
CDS-3UTR GCA 90 bp GTCATTCATTTGCTCAGGCTGAAAGCGTTGGAATCAACAACCATGACTTTGCTCTGTTCCACATCCAGCTaGTGTTCTCCGGCCACATCC +
Preference number: 4 (lower is better)
Translates to: VIHLLRLKALESTTMTLLCSTSS*CSPATS
Trigger: GGATGTGGCCGGAGAACAGCAGCTGGATGTGGAACA...GAGCAAAGTCATGGTTGTTGATTCCAACGCTTTCAGCCTGAGCAAATGAATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411577.5
ENST00000438317.5
CDS-3UTR GCA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGCAGCCTTCATTCTTCTaGTCCTGCATCTTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LSQSINRFINLGLGLTEEQPSFF*SCIFWL
Trigger: CAGCCAGAAGATGCAGGAGCAGAAGAATGAAGGCTG...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000640748.1
CDS-3UTR GCA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGTCAAGGCCAAAGCTCTaGAAGTCATGGACGTGCACA +
Preference number: 4 (lower is better)
Translates to: LSQSINRFINLGLGLTEESRPKL*KSWTCT
Trigger: TGTGCACGTCCATGACTTGCAGAGCTTTGGCCTTGA...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348547.7
ENST00000640748.1
CDS-3UTR CCA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGAGTCCTCCAAAGTCTTaGGGTAGGCATCGAACTGCT +
Preference number: 4 (lower is better)
Translates to: LSQSINRFINLGLGLTEESPPKS*GRHRTA
Trigger: AGCAGTTCGATGCCTACCCCAAGACTTTGGAGGACT...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000640748.1
CDS-3UTR CCA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGCTCCGGCCACATCCATaGCATCAATACTCAGATAGG +
Preference number: 4 (lower is better)
Translates to: LSQSINRFINLGLGLTEELRPHP*HQYSDR
Trigger: CCTATCTGAGTATTGATGCCATGGATGTGGCCGGAG...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348547.7
ENST00000357394.8
CDS-3UTR CCA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGCTGCTCAATAGTATCTaGGTTCTTGAAGGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: LSQSINRFINLGLGLTEELLNSI*VLEGPA
Trigger: GGCTGGGCCTTCAAGAACCCAGATACTATTGAGCAG...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000640748.1
CDS-3UTR CCA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGTCAGCTTCACCATCATaGGCGAGAGCTCATAGAGGA +
Preference number: 4 (lower is better)
Translates to: LSQSINRFINLGLGLTEESASPS*ARAHRG
Trigger: TCCTCTATGAGCTCTCGCCCATGATGGTGAAGCTGA...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000451605.1
CDS-3UTR TCA 90 bp TTTGCTCAGGCTGAAAGCGTTGGAATCAACAACCATGACTTTGCTCTCCTCCACTGGAATCAACAACCATaGCTTTGCTCTCCTCCACTC +
Preference number: 4 (lower is better)
Translates to: FAQAESVGINNHDFALLHWNQQP*LCSPPL
Trigger: GAGTGGAGGAGAGCAAAGTCATGGTTGTTGATTCCA...GTGGAGGAGAGCAAAGTCATGGTTGTTGATTCCAACGCTTTCAGCCTGAGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411577.5
ENST00000438317.5
CDS-3UTR TCA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGAGGTGTTACAGCACTTaGTATCTTCTGCCTCAGCAC +
Preference number: 4 (lower is better)
Translates to: LSQSINRFINLGLGLTEERCYST*YLLPQH
Trigger: GTGCTGAGGCAGAAGATATCAAGTGCTGTAACACCT...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000640748.1
CDS-3UTR TCA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGCTGGTCACAGAGAACTaGTTTGTCCTCAGTACCTCT +
Preference number: 4 (lower is better)
Translates to: LSQSINRFINLGLGLTEELVTEN*FVLSTS
Trigger: AGAGGTACTGAGGACAAATCAGTTCTCTGTGACCAG...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000640748.1
CDS-3UTR GCA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGCTGAGCTCACGGGGATaGCATCTTTATCTAGTCGTT +
Preference number: 4 (lower is better)
Translates to: LSQSINRFINLGLGLTEELSSRG*HLYLVV
Trigger: AACGACTAGATAAAGATGGCATCCCCGTGAGCTCAG...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000348547.7
ENST00000357394.8
CDS-3UTR GCA 90 bp TTTGCTCAGGCTGAAAGCGTTGGAATCAACAACCATGACTTTGCTCTCCTCCACCTGAGCTCACGGGGATaGCATCTTTATCTAGTCGTT +
Preference number: 4 (lower is better)
Translates to: FAQAESVGINNHDFALLHLSSRG*HLYLVV
Trigger: AACGACTAGATAAAGATGGCATCCCCGTGAGCTCAG...GTGGAGGAGAGCAAAGTCATGGTTGTTGATTCCAACGCTTTCAGCCTGAGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411577.5
ENST00000438317.5
CDS-3UTR GCA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGGCACTTGATATCTTCTaGCTCAGCACCATAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LSQSINRFINLGLGLTEEALDIF*LSTIAA
Trigger: AGCTGCTATGGTGCTGAGGCAGAAGATATCAAGTGC...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348547.7
ENST00000357394.8
CDS-3UTR GCA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGTCAAGGCCAAAGCTCTaGAAGTCATGGATCTCCACA +
Preference number: 4 (lower is better)
Translates to: LSQSINRFINLGLGLTEESRPKL*KSWIST
Trigger: TGTGGAGATCCATGACTTGCAGAGCTTTGGCCTTGA...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357394.8
CDS-3UTR GCA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGGCACTTGATATCTTCTaGCTCAGCACCATAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LSQSINRFINLGLGLTEEALDIF*LSTIAA
Trigger: TGCTGCTATGGTGCTGAGGCAGAAGATATCAAGTGC...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640748.1
CDS-3UTR CCA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGAAGAAGCCATACACCTaGCAGCCTTCATTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LSQSINRFINLGLGLTEEKKPYT*QPSFFC
Trigger: GCAGAAGAATGAAGGCTGCCAGGTGTATGGCTTCTT...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000640748.1
CDS-3UTR CCA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGCCTTCATGTACACAGTaGGCACCACCTTCACAAAGT +
Preference number: 4 (lower is better)
Translates to: LSQSINRFINLGLGLTEEPSCTQ*APPSQS
Trigger: ACTTTGTGAAGGTGGTGCCCACTGTGTACATGAAGG...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000451605.1
ENST00000640748.1
CDS-3UTR CCA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGAAGCTCTGCAAGTCATaGATCTCCACAGCATGTACG +
Preference number: 4 (lower is better)
Translates to: LSQSINRFINLGLGLTEEKLCKS*ISTACT
Trigger: CGTACATGCTGTGGAGATCCATGACTTGCAGAGCTT...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357394.8
CDS-3UTR GCA 90 bp GACTTTGCTCTCCTCCACTCCACATCCAGTCCTATAGCAAATTATGTTGGTTCCCTGAGCTCACGGGGATaGCATCTTTATCTAGTCGTT +
Preference number: 4 (lower is better)
Translates to: DFALLHSTSSPIANYVGSLSSRG*HLYLVV
Trigger: AACGACTAGATAAAGATGGCATCCCCGTGAGCTCAG...GGAACCAACATAATTTGCTATAGGACTGGATGTGGAGTGGAGGAGAGCAAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411577.5
ENST00000438317.5
CDS-3UTR CCA 90 bp GTCATCTCCATCTCAAGTCATTCATTTGCTCAGGCTGAAAGCGTTGGAATCAACCTCCGGCCACATCCATaGCATCAATACTCAGATAGG +
Preference number: 4 (lower is better)
Translates to: VISISSHSFAQAESVGINLRPHP*HQYSDR
Trigger: CCTATCTGAGTATTGATGCCATGGATGTGGCCGGAG...GTTGATTCCAACGCTTTCAGCCTGAGCAAATGAATGACTTGAGATGGAGATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411577.5
ENST00000438317.5
CDS-3UTR CCA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGACCTTCACAAAGTACTaGAACATCATGGAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: LSQSINRFINLGLGLTEETFTKY*NIMEAW
Trigger: CCAAGCCTCCATGATGTTCCAGTACTTTGTGAAGGT...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000451605.1
ENST00000640748.1
CDS-3UTR CCA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGCAATTTTCTTCTGGATaGCTCGTGCTGAGTGGTAGA +
Preference number: 4 (lower is better)
Translates to: LSQSINRFINLGLGLTEEQFSSG*LVLSGR
Trigger: TCTACCACTCAGCACGAGCCATCCAGAAGAAAATTG...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000451605.1
ENST00000640748.1
CDS-3UTR CCA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGAGATCAATTTTCTTCTaGATGGCTCGTGCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: LSQSINRFINLGLGLTEERSIFF*MARAEW
Trigger: CCACTCAGCACGAGCCATCCAGAAGAAAATTGATCT...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000451605.1
ENST00000640748.1
CDS-3UTR TCA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGTATCTAGTCGTTGCTTaGACAGGTTGTGTTCCACAT +
Preference number: 4 (lower is better)
Translates to: LSQSINRFINLGLGLTEEYLVVA*TGCVPH
Trigger: ATGTGGAACACAACCTGTTCAAGCAACGACTAGATA...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348547.7
ENST00000357394.8
CDS-3UTR TCA 90 bp AAAGCGTTGGAATCAACAACCATGACTTTGCTCTCCTCCACTCCACATCCAGTCTATCTAGTCGTTGCTTaGACAGGTTGTGTTCCACAT +
Preference number: 4 (lower is better)
Translates to: KALESTTMTLLSSTPHPVYLVVA*TGCVPH
Trigger: ATGTGGAACACAACCTGTTCAAGCAACGACTAGATA...GACTGGATGTGGAGTGGAGGAGAGCAAAGTCATGGTTGTTGATTCCAACGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411577.5
ENST00000438317.5
CDS-3UTR CCA 90 bp ATCTCCATCTCAAGTCATTCATTTGCTCAGGCTGAAAGCGTTGGAATCAACAACAGTCCTCCAAAGTCTTaGGGTAGGCATCGAACTGCT +
Preference number: 4 (lower is better)
Translates to: ISISSHSFAQAESVGINNSPPKS*GRHRTA
Trigger: AGCAGTTCGATGCCTACCCCAAGACTTTGGAGGACT...GTTGTTGATTCCAACGCTTTCAGCCTGAGCAAATGAATGACTTGAGATGGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411577.5
ENST00000438317.5
CDS-3UTR CCA 90 bp CTGAAAGCGTTGGAATCAACAACCATGACTTTGCTCTCCTCCACTCCACATCCATTTGTTACACAGCAGTaGATATCCAATAGCCACTCC +
Preference number: 4 (lower is better)
Translates to: LKALESTTMTLLSSTPHPFVTQQ*ISNSHS
Trigger: GGAGTGGCTATTGGATATCCACTGCTGTGTAACAAA...TGGATGTGGAGTGGAGGAGAGCAAAGTCATGGTTGTTGATTCCAACGCTTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411577.5
CDS-3UTR CCA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGCAACCTTCTCATGTCTaGTCACAGAGAACTGATTTG +
Preference number: 4 (lower is better)
Translates to: LSQSINRFINLGLGLTEEQPSHV*SQRTDL
Trigger: CAAATCAGTTCTCTGTGACCAGACATGAGAAGGTTG...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000451605.1
ENST00000640748.1
CDS-3UTR TCA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGAAAGTACATCGATGTTaGTCTTCAGTTTATCTCCCC +
Preference number: 4 (lower is better)
Translates to: LSQSINRFINLGLGLTEEKVHRC*SSVYLP
Trigger: GGGGAGATAAACTGAAGATCAACATCGATGTACTTT...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348547.7
ENST00000357394.8
CDS-3UTR TCA 90 bp CTGAAAGCGTTGGAATCAACAACCATGACTTTGCTCTCCTCCACTCCACATCCAAAAGTACATCGATGTTaGTCTTCAGTTTATCTCCCC +
Preference number: 4 (lower is better)
Translates to: LKALESTTMTLLSSTPHPKVHRC*SSVYLP
Trigger: GGGGAGATAAACTGAAGATCAACATCGATGTACTTT...TGGATGTGGAGTGGAGGAGAGCAAAGTCATGGTTGTTGATTCCAACGCTTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411577.5
ENST00000438317.5
CDS-3UTR TCA 90 bp AAAGCGTTGGAATCAACAACCATGACTTTGCTCTCCTCCACTCCACATCCAGTCAAAGTACATCGATGTTaGTCTTCAGTTTATCTCCCC +
Preference number: 4 (lower is better)
Translates to: KALESTTMTLLSSTPHPVKVHRC*SSVYLP
Trigger: GGGGAGATAAACTGAAGATCAACATCGATGTACTTT...GACTGGATGTGGAGTGGAGGAGAGCAAAGTCATGGTTGTTGATTCCAACGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411577.5
ENST00000438317.5
CDS-3UTR TCA 90 bp AGTCATTCATTTGCTCAGGCTGAAAGCGTTGGAATCAACAACCATGACTTTGCTTGGAATCAACAACCATaGCTTTGCTCTCCTCCACTC +
Preference number: 4 (lower is better)
Translates to: SHSFAQAESVGINNHDFAWNQQP*LCSPPL
Trigger: GAGTGGAGGAGAGCAAAGTCATGGTTGTTGATTCCA...AGCAAAGTCATGGTTGTTGATTCCAACGCTTTCAGCCTGAGCAAATGAATGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411577.5
ENST00000438317.5
CDS-3UTR GCA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGTCTTTATCTAGTCGTTaGTTGAACAGGTTGTGTTCC +
Preference number: 4 (lower is better)
Translates to: LSQSINRFINLGLGLTEESLSSR*LNRLCS
Trigger: GGAACACAACCTGTTCAAGCAACGACTAGATAAAGA...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348547.7
ENST00000357394.8
CDS-3UTR GCA 90 bp TTGCTCAGGCTGAAAGCGTTGGAATCAACAACCATGACTTTGCTCTCCTCCACTTCTTTATCTAGTCGTTaGTTGAACAGGTTGTGTTCC +
Preference number: 4 (lower is better)
Translates to: LLRLKALESTTMTLLSSTSLSSR*LNRLCS
Trigger: GGAACACAACCTGTTCAAGCAACGACTAGATAAAGA...AGTGGAGGAGAGCAAAGTCATGGTTGTTGATTCCAACGCTTTCAGCCTGAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411577.5
ENST00000438317.5
CDS-3UTR CCA 90 bp ACTAACTTTTGGAGTACTTTGTTACACAGCAGTGGATATCCAATAGCCACTCCTAGTCCTCCAAAGTCTTaGGGTAGGCATCGAACTGCT +
Preference number: 4 (lower is better)
Translates to: TNFWSTLLHSSGYPIATPSPPKS*GRHRTA
Trigger: AGCAGTTCGATGCCTACCCCAAGACTTTGGAGGACT...AGGAGTGGCTATTGGATATCCACTGCTGTGTAACAAAGTACTCCAAAAGTTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411577.5
CDS-3UTR TCA 90 bp CATGACTTTGCTCTCCTCCACTCCACATCCAGTCCTATAGCAAATTATGTTGGTTATCTAGTCGTTGCTTaGACAGGTTGTGTTCCACAT +
Preference number: 4 (lower is better)
Translates to: HDFALLHSTSSPIANYVGYLVVA*TGCVPH
Trigger: ATGTGGAACACAACCTGTTCAAGCAACGACTAGATA...ACCAACATAATTTGCTATAGGACTGGATGTGGAGTGGAGGAGAGCAAAGTCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411577.5
ENST00000438317.5
CDS-3UTR CCA 90 bp AGTCATTCATTTGCTCAGGCTGAAAGCGTTGGAATCAACAACCATGACTTTGCTTTATGTTGGTTCCACTaGTGTCCTGCATTAATCTGC +
Preference number: 4 (lower is better)
Translates to: SHSFAQAESVGINNHDFALCWFH*CPALIC
Trigger: GCAGATTAATGCAGGACACCAGTGGAACCAACATAA...AGCAAAGTCATGGTTGTTGATTCCAACGCTTTCAGCCTGAGCAAATGAATGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411577.5
CDS-3UTR CCA 90 bp AAAAACCTTCTCCTCCAGTCATCTCCATCTCAAGTCATTCATTTGCTCAGGCTGTATAGCAAATTATGTTaGTTCCACTGGTGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: KNLLLQSSPSQVIHLLRLYSKLC*FHWCPA
Trigger: TGCAGGACACCAGTGGAACCAACATAATTTGCTATA...CAGCCTGAGCAAATGAATGACTTGAGATGGAGATGACTGGAGGAGAAGGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411577.5
CDS-3UTR CCA 90 bp GTCATCTCCATCTCAAGTCATTCATTTGCTCAGGCTGAAAGCGTTGGAATCAACTATAGCAAATTATGTTaGTTCCACTGGTGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: VISISSHSFAQAESVGINYSKLC*FHWCPA
Trigger: TGCAGGACACCAGTGGAACCAACATAATTTGCTATA...GTTGATTCCAACGCTTTCAGCCTGAGCAAATGAATGACTTGAGATGGAGATGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411577.5
ENST00000438317.5
CDS-3UTR CCA 90 bp TTGGAGTACTTTGTTACACAGCAGTGGATATCCAATAGCCACTCCTCCCTCCCACAAACTACTAACTTTTaGAGTACTTTGTTACACAGC +
Preference number: 4 (lower is better)
Translates to: LEYFVTQQWISNSHSSLPQTTNF*STLLHS
Trigger: GCTGTGTAACAAAGTACTCCAAAAGTTAGTAGTTTG...TGGGAGGGAGGAGTGGCTATTGGATATCCACTGCTGTGTAACAAAGTACTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411577.5
CDS-3UTR GCA 90 bp AGTCATTCATTTGCTCAGGCTGAAAGCGTTGGAATCAACAACCATGACTTTGCTTCTTTATCTAGTCGTTaGTTGAACAGGTTGTGTTCC +
Preference number: 4 (lower is better)
Translates to: SHSFAQAESVGINNHDFASLSSR*LNRLCS
Trigger: GGAACACAACCTGTTCAAGCAACGACTAGATAAAGA...AGCAAAGTCATGGTTGTTGATTCCAACGCTTTCAGCCTGAGCAAATGAATGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411577.5
ENST00000438317.5
3UTR CAA 72 bp TTTTTATTGTATCAAACTACTAACTTTTGGAGTACTTaGTTACACAGCAGTGGATATCCAATAGCCACTCCT +
Preference number: 4 (lower is better)
Translates to: FLLYQTTNFWST*LHSSGYPIATP
Trigger: AGGAGTGGCTATTGGATATCCACTGCTGTGTAACAAAGTACTCCAAAAGTTAGTAGTTTGATACAATAAAAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411577.5
CDS GCA 90 bp TGTGAGGACGAGGCAGCTTTCACTCCCCAGGCTGACGGAACGAAATaGAGGAACTCCAGTGCTTGGCACCGCGCAGGAGACTCTGGTAGG +
Preference number: 5 (lower is better)
Translates to: CEDEAAFTPQADGTK*RNSSAWHRAGDSGR
Trigger: CCTACCAGAGTCTCCTGCGCGGTGCCAAGCACTGGAGTTCCTGCATTTCGTTCCGTCAGCCTGGGGAGTGAAAGCTGCCTCGTCCTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475211.1
ENST00000482338.5
CDS CCA 90 bp TTCACTCCCCAGGCTGACGGAACGAAATGCAGGAACTCCAGTGCTTaGCACCGCGCAGGAGACTCTGGTAGGGAGCTCCCTGACTCACCT +
Preference number: 5 (lower is better)
Translates to: FTPQADGTKCRNSSA*HRAGDSGRELPDSP
Trigger: AGGTGAGTCAGGGAGCTCCCTACCAGAGTCTCCTGCGCGGTGCCAAGCACTGGAGTTCCTGCATTTCGTTCCGTCAGCCTGGGGAGTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475211.1
ENST00000482338.5
CDS TCA 90 bp CCTATCCTGGCAGCATTTGGTGGGTGTTCTCACGGGGGTCCAGGCTaGGAAGCAGCTCTCCAAAGACGCACCAAGGCTGACCTGACTTCC +
Preference number: 5 (lower is better)
Translates to: PILAAFGGCSHGGPG*EAALQRRTKADLTS
Trigger: GGAAGTCAGGTCAGCCTTGGTGCGTCTTTGGAGAGCTGCTTCTCAGCCTGGACCCCCGTGAGAACACCCACCAAATGCTGCCAGGATAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000488384.1
ENST00000488935.5
CDS CCA 90 bp GCCACAGTTCACTTGCTAGCAGATAGGCTTGGGTACATCCAGCTTTaGGATCTGAGACCCGGCCCCCTCCCCTGGTTACCATGCCGCTCA +
Preference number: 5 (lower is better)
Translates to: ATVHLLADRLGYIQL*DLRPGPLPWLPCRS
Trigger: TGAGCGGCATGGTAACCAGGGGAGGGGGCCGGGTCTCAGATCCCAAAGCTGGATGTACCCAAGCCTATCTGCTAGCAAGTGAACTGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000279052.10
ENST00000486268.5
CDS CCA 90 bp CATCTTCTGGCTGAAGCCCTCTCGCCGGCACTGCTCAATAGTATCTaGGTTCTTGAAGGCCCAGCCTCTACGGCGATATGCCTCCCGCAC +
Preference number: 5 (lower is better)
Translates to: HLLAEALSPALLNSI*VLEGPASTAICLPH
Trigger: GTGCGGGAGGCATATCGCCGTAGAGGCTGGGCCTTCAAGAACCCAGATACTATTGAGCAGTGCCGGCGAGAGGGCTTCAGCCAGAAGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000413587.5
ENST00000416206.5
ENST00000447986.5
ENST00000461043.6
ENST00000482338.5
ENST00000489071.5
ENST00000496172.5
ENST00000640748.1
CDS CCA 90 bp CCTGGGGTGGGAGGGGAGCCTCTCCGTCCACCTTCATGTACACAGTaGGCACCACCTTCACAAAGTACTGGAACATCATGGAGGCTTGGG +
Preference number: 5 (lower is better)
Translates to: PGVGGEPLRPPSCTQ*APPSQSTGTSWRLG
Trigger: CCCAAGCCTCCATGATGTTCCAGTACTTTGTGAAGGTGGTGCCCACTGTGTACATGAAGGTGGACGGAGAGGCTCCCCTCCCACCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451605.1
CDS TCA 90 bp CCCAACAGCCCATTGGCAACCTTCTCATGTCTGGTCACAGAGAACTaGTTTGTCCTCAGTACCTGGGGTGGGAGGGGAGCCTCTCCGTCC +
Preference number: 5 (lower is better)
Translates to: PNSPLATFSCLVTEN*FVLSTWGGRGASPS
Trigger: GGACGGAGAGGCTCCCCTCCCACCCCAGGTACTGAGGACAAATCAGTTCTCTGTGACCAGACATGAGAAGGTTGCCAATGGGCTGTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451605.1
CDS GCA 90 bp CTCTGCAAGTCATGGATCTCCACAGCATGTACGTGCACATGGGACTaGTGGAAGCTCTTCCCAGGGGCAAAGTGGAAGTTTCCGGCCACC +
Preference number: 5 (lower is better)
Translates to: LCKSWISTACTCTWD*WKLFPGAKWKFPAT
Trigger: GGTGGCCGGAAACTTCCACTTTGCCCCTGGGAAGAGCTTCCAGCAGTCCCATGTGCACGTACATGCTGTGGAGATCCATGACTTGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357394.8
CDS GCA 90 bp CGTGCTATCATCTTTAACCTGCACACACACCCGTGCACATGGGACTaGTGGAAGCTCTTCCCAGGGGCAAAGTGGAAGTTTCCGGCCACC +
Preference number: 5 (lower is better)
Translates to: RAIIFNLHTHPCTWD*WKLFPGAKWKFPAT
Trigger: GGTGGCCGGAAACTTCCACTTTGCCCCTGGGAAGAGCTTCCAGCAGTCCCATGTGCACGGGTGTGTGTGCAGGTTAAAGATGATAGCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416206.5
CDS GCA 90 bp CAAGCCAGGCTCCGTGCTATCATCTTTAACCTGCACACACACCCGTaGACATGGGACTGCTGGAAGCTCTTCCCAGGGGCAAAGTGGAAG +
Preference number: 5 (lower is better)
Translates to: QARLRAIIFNLHTHP*TWDCWKLFPGAKWK
Trigger: CTTCCACTTTGCCCCTGGGAAGAGCTTCCAGCAGTCCCATGTGCACGGGTGTGTGTGCAGGTTAAAGATGATAGCACGGAGCCTGGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416206.5
CDS GCA 90 bp AGAAAGAGCAGGCGCTTTAAATCTAACAGCCCCAGGCCTGCACTCTaGCTGGGAGGGCAAATCCCCCACCCTCTCTGTGCCTCAGTCTTT +
Preference number: 5 (lower is better)
Translates to: RKSRRFKSNSPRPAL*LGGQIPHPLCASVF
Trigger: AAAGACTGAGGCACAGAGAGGGTGGGGGATTTGCCCTCCCAGGCAGAGTGCAGGCCTGGGGCTGTTAGATTTAAAGCGCCTGCTCTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475211.1
CDS CCA 90 bp GAAGGCCTTGGTCGCCCAACAGCCCATTGGCAACCTTCTCATGTCTaGTCACAGAGAACTGATTTGTCCTCAGTACCTGGGGTGGGAGGG +
Preference number: 5 (lower is better)
Translates to: EGLGRPTAHWQPSHV*SQRTDLSSVPGVGG
Trigger: CCCTCCCACCCCAGGTACTGAGGACAAATCAGTTCTCTGTGACCAGACATGAGAAGGTTGCCAATGGGCTGTTGGGCGACCAAGGCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000442139.5
ENST00000451605.1
ENST00000488384.1
CDS CCA 90 bp ATCTCCCCAGCTAGTGCAGATCACTCACCGTGCACATGGGACTGCTaGAAGCTCTTCCCAGGGGCAAAGTGGAAGTTTCCGGCCACCTTA +
Preference number: 5 (lower is better)
Translates to: ISPASADHSPCTWDC*KLFPGAKWKFPATL
Trigger: TAAGGTGGCCGGAAACTTCCACTTTGCCCCTGGGAAGAGCTTCCAGCAGTCCCATGTGCACGGTGAGTGATCTGCACTAGCTGGGGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000447986.5
ENST00000489071.5
CDS GCA 90 bp CGCTCAGCCTCTGAGCTCACGGGGATGCCATCTTTATCTAGTCGTTaGTTGAACAGGTTGTGTTCCACATCCAGCTGCTGTTCTCCGGCC +
Preference number: 5 (lower is better)
Translates to: RSASELTGMPSLSSR*LNRLCSTSSCCSPA
Trigger: GGCCGGAGAACAGCAGCTGGATGTGGAACACAACCTGTTCAAGCAACGACTAGATAAAGATGGCATCCCCGTGAGCTCAGAGGCTGAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000279052.10
ENST00000348547.7
ENST00000357394.8
ENST00000411577.5
ENST00000413587.5
ENST00000416206.5
ENST00000438317.5
ENST00000447986.5
ENST00000461043.6
ENST00000486268.5
ENST00000496172.5
CDS GCA 90 bp GCAAGTCATGGACACAAGCCAGGCTCCGTGCTATCATCTTTAACCTaGACACACACCCGTGCACATGGGACTGCTGGAAGCTCTTCCCAG +
Preference number: 5 (lower is better)
Translates to: ASHGHKPGSVLSSLT*THTRAHGTAGSSSQ
Trigger: CTGGGAAGAGCTTCCAGCAGTCCCATGTGCACGGGTGTGTGTGCAGGTTAAAGATGATAGCACGGAGCCTGGCTTGTGTCCATGACTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416206.5
CDS CCA 90 bp AGGGAGCTCCCTGACTCACCTCTCCGTCCACCTTCATGTACACAGTaGGCACCACCTTCACAAAGTACTGGAACATCATGGAGGCTTGGG +
Preference number: 5 (lower is better)
Translates to: RELPDSPLRPPSCTQ*APPSQSTGTSWRLG
Trigger: CCCAAGCCTCCATGATGTTCCAGTACTTTGTGAAGGTGGTGCCCACTGTGTACATGAAGGTGGACGGAGAGGTGAGTCAGGGAGCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482338.5
CDS CCA 90 bp CCTCCAGGTGCCAAGTCTTTACAGTTTACCTATCCTGGCAGCATTTaGTGGGTGTTCTCACGGGGGTCCAGGCTGAGAAGCAGCTCTCCA +
Preference number: 5 (lower is better)
Translates to: PPGAKSLQFTYPGSI*WVFSRGSRLRSSSP
Trigger: TGGAGAGCTGCTTCTCAGCCTGGACCCCCGTGAGAACACCCACCAAATGCTGCCAGGATAGGTAAACTGTAAAGACTTGGCACCTGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488384.1
CDS CCA 90 bp TCAGCCTTCCCCTCCAGGTGCCAAGTCTTTACAGTTTACCTATCCTaGCAGCATTTGGTGGGTGTTCTCACGGGGGTCCAGGCTGAGAAG +
Preference number: 5 (lower is better)
Translates to: SAFPSRCQVFTVYLS*QHLVGVLTGVQAEK
Trigger: CTTCTCAGCCTGGACCCCCGTGAGAACACCCACCAAATGCTGCCAGGATAGGTAAACTGTAAAGACTTGGCACCTGGAGGGGAAGGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488384.1
CDS-3UTR CAA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGGCGCCCCCGCAGGTCTaGACCCGGAAGTCCTCCAAA +
Preference number: 5 (lower is better)
Translates to: LSQSINRFINLGLGLTEEAPPQV*TRKSSK
Trigger: TTTGGAGGACTTCCGGGTCAAGACCTGCGGGGGCGC...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000640748.1
CDS-3UTR CAA 90 bp CCTCCAGTCATCTCCATCTCAAGTCATTCATTTGCTCAGGCTGAAAGCGTTGGAGCGCCCCCGCAGGTCTaGACCCGGAAGTCCTCCAAA +
Preference number: 5 (lower is better)
Translates to: PPVISISSHSFAQAESVGAPPQV*TRKSSK
Trigger: TTTGGAGGACTTCCGGGTCAAGACCTGCGGGGGCGC...TCCAACGCTTTCAGCCTGAGCAAATGAATGACTTGAGATGGAGATGACTGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411577.5
ENST00000438317.5
CDS TCA 90 bp CTCTCAGCTCACTTGCAAGATCCAAGTGGGGGAAGCCAGTTGCCGTaGTACAAGGACACACAAGCAACCCTACTGAGAGGCCCATGTGGT +
Preference number: 5 (lower is better)
Translates to: LSAHLQDPSGGSQLP*YKDTQATLLRGPCG
Trigger: ACCACATGGGCCTCTCAGTAGGGTTGCTTGTGTGTCCTTGTATCACGGCAACTGGCTTCCCCCACTTGGATCTTGCAAGTGAGCTGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000279052.10
CDS TCA 90 bp GGTGTGGTCCAGGGGGTTCACAATGCCTGGATAGTCCTCCCCAAATaGCAGGTGCTGGATGTAGTGGGTCATGTTGATGTTGTCAAGGCC +
Preference number: 5 (lower is better)
Translates to: GVVQGVHNAWIVLPK*QVLDVVGHVDVVKA
Trigger: GGCCTTGACAACATCAACATGACCCACTACATCCAGCACCTGTCATTTGGGGAGGACTATCCAGGCATTGTGAACCCCCTGGACCACACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000413587.5
ENST00000416206.5
ENST00000465298.1
ENST00000482338.5
ENST00000496172.5
ENST00000640748.1
CDS CCA 90 bp GAAGGCCTTGGTCGCCCAACAGCCCATTGGCAACCTTCTCATGTCTaGTCACAGAGAACTGATTTGTCCTCAGTACCTCTCCGTCCACCT +
Preference number: 5 (lower is better)
Translates to: EGLGRPTAHWQPSHV*SQRTDLSSVPLRPP
Trigger: AGGTGGACGGAGAGGTACTGAGGACAAATCAGTTCTCTGTGACCAGACATGAGAAGGTTGCCAATGGGCTGTTGGGCGACCAAGGCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000413587.5
ENST00000416206.5
ENST00000465298.1
ENST00000640748.1
CDS CCA 90 bp AGAGGACGAAGACTCCGGGAAGGCCTTGGTCGCCCAACAGCCCATTaGCAACCTTCTCATGTCTGGTCACAGAGAACTGATTTGTCCTCA +
Preference number: 5 (lower is better)
Translates to: RGRRLREGLGRPTAH*QPSHVWSQRTDLSS
Trigger: TGAGGACAAATCAGTTCTCTGTGACCAGACATGAGAAGGTTGCCAATGGGCTGTTGGGCGACCAAGGCCTTCCCGGAGTCTTCGTCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000413587.5
ENST00000416206.5
ENST00000442139.5
ENST00000451605.1
ENST00000465298.1
ENST00000488384.1
ENST00000488935.5
CDS CCA 90 bp TGCAAGTCATGGATCTCCACAGCATGTACGTGCACATGGGACTGCTaGAAGCTCTTCCCAGGGGCAAAGTGGAAGTTTCCGGCCACCTTA +
Preference number: 5 (lower is better)
Translates to: CKSWISTACTCTWDC*KLFPGAKWKFPATL
Trigger: TAAGGTGGCCGGAAACTTCCACTTTGCCCCTGGGAAGAGCTTCCAGCAGTCCCATGTGCACGTACATGCTGTGGAGATCCATGACTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357394.8
CDS CCA 90 bp CCAAAGCTCTGCAAGTCATGGATCTCCACAGCATGTACGTGCACATaGGACTGCTGGAAGCTCTTCCCAGGGGCAAAGTGGAAGTTTCCG +
Preference number: 5 (lower is better)
Translates to: PKLCKSWISTACTCT*DCWKLFPGAKWKFP
Trigger: CGGAAACTTCCACTTTGCCCCTGGGAAGAGCTTCCAGCAGTCCCATGTGCACGTACATGCTGTGGAGATCCATGACTTGCAGAGCTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357394.8
CDS CCA 90 bp GCTATCATCTTTAACCTGCACACACACCCGTGCACATGGGACTGCTaGAAGCTCTTCCCAGGGGCAAAGTGGAAGTTTCCGGCCACCTTA +
Preference number: 5 (lower is better)
Translates to: AIIFNLHTHPCTWDC*KLFPGAKWKFPATL
Trigger: TAAGGTGGCCGGAAACTTCCACTTTGCCCCTGGGAAGAGCTTCCAGCAGTCCCATGTGCACGGGTGTGTGTGCAGGTTAAAGATGATAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416206.5
CDS CCA 90 bp AGGGAGCTCCCTGACTCACCTCTCCGTCCACCTTCATGTACACAGTaGGCACCACCTTCACAAAGTACTGGAACATCATGGAGGGTTGTC +
Preference number: 5 (lower is better)
Translates to: RELPDSPLRPPSCTQ*APPSQSTGTSWRVV
Trigger: GACAACCCTCCATGATGTTCCAGTACTTTGTGAAGGTGGTGCCCACTGTGTACATGAAGGTGGACGGAGAGGTGAGTCAGGGAGCTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475211.1
CDS CCA 90 bp CCAGGTGCCAAGTCTTTACAGTTTACCTATCCTGGCAGCATTTGGTaGGTGTTCTCACGGGGGTCCAGGCTGAGAAGCAGCTCTCCAAAG +
Preference number: 5 (lower is better)
Translates to: PGAKSLQFTYPGSIW*VFSRGSRLRSSSPK
Trigger: CTTTGGAGAGCTGCTTCTCAGCCTGGACCCCCGTGAGAACACCCACCAAATGCTGCCAGGATAGGTAAACTGTAAAGACTTGGCACCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488384.1
CDS-3UTR CAA 90 bp TCTCCTCCAGTCATCTCCATCTCAAGTCATTCATTTGCTCAGGCTGAAAGCGTTGCGCCCCCGCAGGTCTaGACCCGGAAGTCCTCCAAA +
Preference number: 5 (lower is better)
Translates to: SPPVISISSHSFAQAESVAPPQV*TRKSSK
Trigger: TTTGGAGGACTTCCGGGTCAAGACCTGCGGGGGCGC...AACGCTTTCAGCCTGAGCAAATGAATGACTTGAGATGGAGATGACTGGAGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411577.5
ENST00000438317.5
CDS-3UTR CAA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGTGGGGCGCAGTGACATaGGTGTGGTCCAGGGGGTTC +
Preference number: 5 (lower is better)
Translates to: LSQSINRFINLGLGLTEEWGAVT*VWSRGF
Trigger: GAACCCCCTGGACCACACCAATGTCACTGCGCCCCA...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000640748.1
CDS-3UTR CAA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGGACTCCGGGAAGGCCTaGGTCGCCCAACAGCCCATT +
Preference number: 5 (lower is better)
Translates to: LSQSINRFINLGLGLTEEDSGKA*VAQQPI
Trigger: AATGGGCTGTTGGGCGACCAAGGCCTTCCCGGAGTC...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000451605.1
CDS TCA 90 bp CAGCCTCTGAGCTCACGGGGATGCCATCTTTATCTAGTCGTTGCTTaGACAGGTTGTGTTCCACATCCAGCTGCTGTTCTCCGGCCACAT +
Preference number: 5 (lower is better)
Translates to: QPLSSRGCHLYLVVA*TGCVPHPAAVLRPH
Trigger: ATGTGGCCGGAGAACAGCAGCTGGATGTGGAACACAACCTGTTCAAGCAACGACTAGATAAAGATGGCATCCCCGTGAGCTCAGAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000279052.10
ENST00000348547.7
ENST00000357394.8
ENST00000411577.5
ENST00000413587.5
ENST00000416206.5
ENST00000438317.5
ENST00000447986.5
ENST00000461043.6
ENST00000486268.5
ENST00000496172.5
CDS GCA 90 bp TTATTGACTTCCAAGAAGCCATACACCTGGCAGCCTTCATTCTTCTaGTCCTGCATCTTCTGGCTGAAGCCCTCTCGCCGGCACTGCTCA +
Preference number: 5 (lower is better)
Translates to: LLTSKKPYTWQPSFF*SCIFWLKPSRRHCS
Trigger: TGAGCAGTGCCGGCGAGAGGGCTTCAGCCAGAAGATGCAGGAGCAGAAGAATGAAGGCTGCCAGGTGTATGGCTTCTTGGAAGTCAATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000413587.5
ENST00000416206.5
ENST00000447986.5
ENST00000461043.6
ENST00000482338.5
ENST00000489071.5
ENST00000496172.5
ENST00000640748.1
CDS CCA 90 bp CAGCTGCTGTTCTCCGGCCACATCCATGGCATCAATACTCAGATCTaGAAGCAGGAAAATCAGGCTAAGGTACTGGGACCAGGCACAAGG +
Preference number: 5 (lower is better)
Translates to: QLLFSGHIHGINTQI*KQENQAKVLGPGTR
Trigger: CCTTGTGCCTGGTCCCAGTACCTTAGCCTGATTTTCCTGCTTCCAGATCTGAGTATTGATGCCATGGATGTGGCCGGAGAACAGCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413587.5
CDS CCA 90 bp TTCCCCTTTCCTGTTGAGCCTCTCCGTCCACCTTCATGTACACAGTaGGCACCACCTTCACAAAGTACTGGAACATCATGGAGGCTTGGG +
Preference number: 5 (lower is better)
Translates to: FPFPVEPLRPPSCTQ*APPSQSTGTSWRLG
Trigger: CCCAAGCCTCCATGATGTTCCAGTACTTTGTGAAGGTGGTGCCCACTGTGTACATGAAGGTGGACGGAGAGGCTCAACAGGAAAGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442139.5
CDS CCA 90 bp AATGAGCAGCAGGCAGAAGAGGACCACTCAAGCTCACCAAGAAGGTaGCCAGCATCTAAATCTCCCCAGCTAGTGCAGATCACTCACCGT +
Preference number: 5 (lower is better)
Translates to: NEQQAEEDHSSSPRR*PASKSPQLVQITHR
Trigger: ACGGTGAGTGATCTGCACTAGCTGGGGAGATTTAGATGCTGGCCACCTTCTTGGTGAGCTTGAGTGGTCCTCTTCTGCCTGCTGCTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447986.5
ENST00000489071.5
CDS CCA 90 bp GAAGGCCTTGGTCGCCCAACAGCCCATTGGCAACCTTCTCATGTCTaGTCACAGAGAACTGATTTGTCCTCAGTACCTATCCTGGCAGCA +
Preference number: 5 (lower is better)
Translates to: EGLGRPTAHWQPSHV*SQRTDLSSVPILAA
Trigger: TGCTGCCAGGATAGGTACTGAGGACAAATCAGTTCTCTGTGACCAGACATGAGAAGGTTGCCAATGGGCTGTTGGGCGACCAAGGCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488935.5
CDS CCA 90 bp GATGAGCGAATACTCCGGGAAGGCCTTGGTCGCCCAACAGCCCATTaGCAACCTTCTCATGTCTGGTCACAGAGAACTGATTTGTCCTCA +
Preference number: 5 (lower is better)
Translates to: DERILREGLGRPTAH*QPSHVWSQRTDLSS
Trigger: TGAGGACAAATCAGTTCTCTGTGACCAGACATGAGAAGGTTGCCAATGGGCTGTTGGGCGACCAAGGCCTTCCCGGAGTATTCGCTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640748.1
CDS-3UTR CAA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGTACTCCGGGAAGGCCTaGGTCGCCCAACAGCCCATT +
Preference number: 5 (lower is better)
Translates to: LSQSINRFINLGLGLTEEYSGKA*VAQQPI
Trigger: AATGGGCTGTTGGGCGACCAAGGCCTTCCCGGAGTA...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640748.1
CDS CCA 90 bp TGGAAGTTTCCGGCCACCTTATTGACTTCCAAGAAGCCATACACCTaGCAGCCTTCATTCTTCTGCTCCTGCATCTTCTGGCTGAAGCCC +
Preference number: 5 (lower is better)
Translates to: WKFPATLLTSKKPYT*QPSFFCSCIFWLKP
Trigger: GGGCTTCAGCCAGAAGATGCAGGAGCAGAAGAATGAAGGCTGCCAGGTGTATGGCTTCTTGGAAGTCAATAAGGTGGCCGGAAACTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000413587.5
ENST00000416206.5
ENST00000447986.5
ENST00000461043.6
ENST00000482338.5
ENST00000489071.5
ENST00000496172.5
ENST00000640748.1
CDS TCA 90 bp ACTGGGACCAGGCACAAGGCATGTGCGGAAAAAGTACATCGATGTTaGTCTTCAGTTTATCTCCCCGCGACTTGTCCACGTAGAGCTCAG +
Preference number: 5 (lower is better)
Translates to: TGTRHKACAEKVHRC*SSVYLPATCPRRAQ
Trigger: CTGAGCTCTACGTGGACAAGTCGCGGGGAGATAAACTGAAGATCAACATCGATGTACTTTTTCCGCACATGCCTTGTGCCTGGTCCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413587.5
CDS CCA 90 bp ACTGATTTGTCCTCAGTACCTCTCCGTCCACCTTCATGTACACAGTaGGCACCACCTTCACAAAGTACTGGAACATCATGGAGGCTTGGG +
Preference number: 5 (lower is better)
Translates to: TDLSSVPLRPPSCTQ*APPSQSTGTSWRLG
Trigger: CCCAAGCCTCCATGATGTTCCAGTACTTTGTGAAGGTGGTGCCCACTGTGTACATGAAGGTGGACGGAGAGGTACTGAGGACAAATCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000413587.5
ENST00000416206.5
ENST00000465298.1
ENST00000640748.1
CDS-3UTR CAA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGGAACATCATGGAGGCTaGGGGCGCAGTGACATTGGT +
Preference number: 5 (lower is better)
Translates to: LSQSINRFINLGLGLTEEEHHGG*GRSDIG
Trigger: ACCAATGTCACTGCGCCCCAAGCCTCCATGATGTTC...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000451605.1
ENST00000640748.1
CDS-3UTR CAA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGTCGCCCAACAGCCCATaGGCAACCTTCTCATGTCTG +
Preference number: 5 (lower is better)
Translates to: LSQSINRFINLGLGLTEESPNSP*ATFSCL
Trigger: CAGACATGAGAAGGTTGCCAATGGGCTGTTGGGCGA...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000451605.1
ENST00000640748.1
CDS GCA 90 bp CTCAATAGTATCTGGGTTCTTGAAGGCCCAGCCTCTACGGCGATATaGCTCCCGCACATCTTCACAGGTGTTACAGCACTTGATATCTTC +
Preference number: 5 (lower is better)
Translates to: LNSIWVLEGPASTAI*LPHIFTGVTALDIF
Trigger: GAAGATATCAAGTGCTGTAACACCTGTGAAGATGTGCGGGAGGCATATCGCCGTAGAGGCTGGGCCTTCAAGAACCCAGATACTATTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000413587.5
ENST00000416206.5
ENST00000447986.5
ENST00000461043.6
ENST00000482338.5
ENST00000489071.5
ENST00000496172.5
ENST00000640748.1
CDS CCA 90 bp CTTTGCTCTCCTCCACTCCACATCCAGTCCTATAGCAAATTATGTTaGTTCCACTGGTGTCCTGCATTAATCTGCATGCCGCTCAGCCTC +
Preference number: 5 (lower is better)
Translates to: LCSPPLHIQSYSKLC*FHWCPALICMPLSL
Trigger: GAGGCTGAGCGGCATGCAGATTAATGCAGGACACCAGTGGAACCAACATAATTTGCTATAGGACTGGATGTGGAGTGGAGGAGAGCAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411577.5
CDS-3UTR CAA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGCGTTGCTTGAACAGGTaGTGTTCCACATCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: LSQSINRFINLGLGLTEERCLNR*CSTSSC
Trigger: GCAGCTGGATGTGGAACACAACCTGTTCAAGCAACG...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348547.7
ENST00000357394.8
CDS-3UTR CAA 90 bp TTGCTCAGGCTGAAAGCGTTGGAATCAACAACCATGACTTTGCTCTCCTCCACTCGTTGCTTGAACAGGTaGTGTTCCACATCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: LLRLKALESTTMTLLSSTRCLNR*CSTSSC
Trigger: GCAGCTGGATGTGGAACACAACCTGTTCAAGCAACG...AGTGGAGGAGAGCAAAGTCATGGTTGTTGATTCCAACGCTTTCAGCCTGAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411577.5
ENST00000438317.5
CDS CCA 90 bp CCTGCATTCCAAAGGGGAAGAGCATTAAGGGCTGAATTAAGCCAATaGGCTGGGAAAGCAAACACTCAAAGAAGCCTGGGTCCATCTAGA +
Preference number: 5 (lower is better)
Translates to: PAFQRGRALRAELSQ*AGKANTQRSLGPSR
Trigger: TCTAGATGGACCCAGGCTTCTTTGAGTGTTTGCTTTCCCAGCCCATTGGCTTAATTCAGCCCTTAATGCTCTTCCCCTTTGGAATGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279052.10
CDS-3UTR CAA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGTGGGTCATGTTGATGTaGTCAAGGCCAAAGCTCTGC +
Preference number: 5 (lower is better)
Translates to: LSQSINRFINLGLGLTEEWVMLM*SRPKLC
Trigger: GCAGAGCTTTGGCCTTGACAACATCAACATGACCCA...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000640748.1
CDS-3UTR CAA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGTCACAGAGAACTGATTaGTCCTCAGTACCTGGGGTG +
Preference number: 5 (lower is better)
Translates to: LSQSINRFINLGLGLTEESQRTD*SSVPGV
Trigger: CACCCCAGGTACTGAGGACAAATCAGTTCTCTGTGA...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000451605.1
CDS TCA 90 bp TACTCAGATAGGCACAAGGCATGTGCGGAAAAAGTACATCGATGTTaGTCTTCAGTTTATCTCCCCGCGACTTGTCCACGTAGAGCTCAG +
Preference number: 5 (lower is better)
Translates to: YSDRHKACAEKVHRC*SSVYLPATCPRRAQ
Trigger: CTGAGCTCTACGTGGACAAGTCGCGGGGAGATAAACTGAAGATCAACATCGATGTACTTTTTCCGCACATGCCTTGTGCCTATCTGAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000279052.10
ENST00000348547.7
ENST00000357394.8
ENST00000411577.5
ENST00000416206.5
ENST00000438317.5
ENST00000447986.5
ENST00000461043.6
ENST00000486268.5
ENST00000496172.5
CDS GCA 90 bp TCTTTATCTAGTCGTTGCTTGAACAGGTTGTGTTCCACATCCAGCTaGTGTTCTCCGGCCACATCCATGGCATCAATACTCAGATCTGGA +
Preference number: 5 (lower is better)
Translates to: SLSSRCLNRLCSTSS*CSPATSMASILRSG
Trigger: TCCAGATCTGAGTATTGATGCCATGGATGTGGCCGGAGAACAGCAGCTGGATGTGGAACACAACCTGTTCAAGCAACGACTAGATAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413587.5
CDS-3UTR CAA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGCAGGTGTTACAGCACTaGATATCTTCTGCCTCAGCA +
Preference number: 5 (lower is better)
Translates to: LSQSINRFINLGLGLTEEQVLQH*ISSASA
Trigger: TGCTGAGGCAGAAGATATCAAGTGCTGTAACACCTG...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000640748.1
CDS-3UTR CAA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGTTTCCGGCCACCTTATaGACTTCCAAGAAGCCATAC +
Preference number: 5 (lower is better)
Translates to: LSQSINRFINLGLGLTEEFPATL*TSKKPY
Trigger: GTATGGCTTCTTGGAAGTCAATAAGGTGGCCGGAAA...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000640748.1
CDS-3UTR CAA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGTCACAGAGAACTGATTaGTCCTCAGTACCTCTCCGT +
Preference number: 5 (lower is better)
Translates to: LSQSINRFINLGLGLTEESQRTD*SSVPLR
Trigger: ACGGAGAGGTACTGAGGACAAATCAGTTCTCTGTGA...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000640748.1
CDS-3UTR CAA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGCCGAGGGTGACTACGTaGTCTTCCCTAGATCAATTT +
Preference number: 5 (lower is better)
Translates to: LSQSINRFINLGLGLTEEPRVTT*SSLDQF
Trigger: AAATTGATCTAGGGAAGACAACGTAGTCACCCTCGG...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000451605.1
ENST00000640748.1
CDS TCA 90 bp ATCATCCCCATTTTACAGAAGAAGCAACTAAATAGGGCCCAAATATaGCATAGCCCAGGTGTGGCAGAACCTGTGCTCCAACCTAGCTCT +
Preference number: 5 (lower is better)
Translates to: IIPILQKKQLNRAQI*HSPGVAEPVLQPSS
Trigger: AGAGCTAGGTTGGAGCACAGGTTCTGCCACACCTGGGCTATGTCATATTTGGGCCCTATTTAGTTGCTTCTTCTGTAAAATGGGGATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447986.5
CDS-3UTR CAA 90 bp AGGCTGAAAGCGTTGGAATCAACAACCATGACTTTGCTCTCCTCCACTCCACATTCTCAAGTCATTCATTaGCTCAGGCTGAAAGCGTTG +
Preference number: 5 (lower is better)
Translates to: RLKALESTTMTLLSSTPHSQVIH*LRLKAL
Trigger: CAACGCTTTCAGCCTGAGCAAATGAATGACTTGAGA...ATGTGGAGTGGAGGAGAGCAAAGTCATGGTTGTTGATTCCAACGCTTTCAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411577.5
ENST00000438317.5
CDS-3UTR CAA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGTTATCTAGTCGTTGCTaGAACAGGTTGTGTTCCACA +
Preference number: 5 (lower is better)
Translates to: LSQSINRFINLGLGLTEELSSRC*NRLCST
Trigger: TGTGGAACACAACCTGTTCAAGCAACGACTAGATAA...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348547.7
ENST00000357394.8
CDS-3UTR CAA 90 bp GTCATTCATTTGCTCAGGCTGAAAGCGTTGGAATCAACAACCATGACTTTGCTCTCAACAACCATGACTTaGCTCTCCTCCACTCCACAT +
Preference number: 5 (lower is better)
Translates to: VIHLLRLKALESTTMTLLSTTMT*LSSTPH
Trigger: ATGTGGAGTGGAGGAGAGCAAAGTCATGGTTGTTGA...GAGCAAAGTCATGGTTGTTGATTCCAACGCTTTCAGCCTGAGCAAATGAATGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411577.5
ENST00000438317.5
CDS-3UTR CAA 90 bp GTCATCTCCATCTCAAGTCATTCATTTGCTCAGGCTGAAAGCGTTGGAATCAACTCAACAACCATGACTTaGCTCTCCTCCACTCCACAT +
Preference number: 5 (lower is better)
Translates to: VISISSHSFAQAESVGINSTTMT*LSSTPH
Trigger: ATGTGGAGTGGAGGAGAGCAAAGTCATGGTTGTTGA...GTTGATTCCAACGCTTTCAGCCTGAGCAAATGAATGACTTGAGATGGAGATGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411577.5
ENST00000438317.5
CDS-3UTR CAA 90 bp CATGACTTTGCTCTCCTCCACTCCACATCCAGTCCTATAGCAAATTATGTTGGTCTCAGGCTGAAAGCGTaGGAATCAACAACCATGACT +
Preference number: 5 (lower is better)
Translates to: HDFALLHSTSSPIANYVGLRLKA*ESTTMT
Trigger: AGTCATGGTTGTTGATTCCAACGCTTTCAGCCTGAG...ACCAACATAATTTGCTATAGGACTGGATGTGGAGTGGAGGAGAGCAAAGTCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411577.5
ENST00000438317.5
CDS TCA 90 bp AGACTGCAGGAGACAAAGCTAGATGTGAACCCAGGCAATCTGACTTaGGAACCTAAATTCTCATTAAACCACCTGCATTCCAAAGGGGAA +
Preference number: 5 (lower is better)
Translates to: RLQETKLDVNPGNLT*EPKFSLNHLHSKGE
Trigger: TTCCCCTTTGGAATGCAGGTGGTTTAATGAGAATTTAGGTTCTCAAGTCAGATTGCCTGGGTTCACATCTAGCTTTGTCTCCTGCAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279052.10
CDS-3UTR CAA 90 bp CAAACTACTAACTTTTGGAGTACTTTGTTACACAGCAGTGGATATCCAATAGCCCGTTGCTTGAACAGGTaGTGTTCCACATCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: QTTNFWSTLLHSSGYPIARCLNR*CSTSSC
Trigger: GCAGCTGGATGTGGAACACAACCTGTTCAAGCAACG...GGCTATTGGATATCCACTGCTGTGTAACAAAGTACTCCAAAAGTTAGTAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411577.5
CDS-3UTR CAA 90 bp TTTTGGAGTACTTTGTTACACAGCAGTGGATATCCAATAGCCACTCCTCCCTCCTTATCTAGTCGTTGCTaGAACAGGTTGTGTTCCACA +
Preference number: 5 (lower is better)
Translates to: FWSTLLHSSGYPIATPPSLSSRC*NRLCST
Trigger: TGTGGAACACAACCTGTTCAAGCAACGACTAGATAA...GGAGGGAGGAGTGGCTATTGGATATCCACTGCTGTGTAACAAAGTACTCCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411577.5
CDS-3UTR CAA 90 bp CTATCACAATCAATCAATAGATTTATCAACCTGGGGCTGGGGCTGACCGAGGAGAAAAGTACATCGATGTaGATCTTCAGTTTATCTCCC +
Preference number: 5 (lower is better)
Translates to: LSQSINRFINLGLGLTEEKSTSM*IFSLSP
Trigger: GGGAGATAAACTGAAGATCAACATCGATGTACTTTT...CTCCTCGGTCAGCCCCAGCCCCAGGTTGATAAATCTATTGATTGATTGTGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000348547.7
ENST00000357394.8
CDS-3UTR CAA 90 bp GTCATCTCCATCTCAAGTCATTCATTTGCTCAGGCTGAAAGCGTTGGAATCAACTTATCTAGTCGTTGCTaGAACAGGTTGTGTTCCACA +
Preference number: 5 (lower is better)
Translates to: VISISSHSFAQAESVGINLSSRC*NRLCST
Trigger: TGTGGAACACAACCTGTTCAAGCAACGACTAGATAA...GTTGATTCCAACGCTTTCAGCCTGAGCAAATGAATGACTTGAGATGGAGATGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411577.5
ENST00000438317.5
CDS-3UTR CAA 90 bp AGTCATTCATTTGCTCAGGCTGAAAGCGTTGGAATCAACAACCATGACTTTGCTTCTCAAGTCATTCATTaGCTCAGGCTGAAAGCGTTG +
Preference number: 5 (lower is better)
Translates to: SHSFAQAESVGINNHDFASQVIH*LRLKAL
Trigger: CAACGCTTTCAGCCTGAGCAAATGAATGACTTGAGA...AGCAAAGTCATGGTTGTTGATTCCAACGCTTTCAGCCTGAGCAAATGAATGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411577.5
ENST00000438317.5
CDS-3UTR CAA 90 bp TCTCCTCCAGTCATCTCCATCTCAAGTCATTCATTTGCTCAGGCTGAAAGCGTTAAAAGTACATCGATGTaGATCTTCAGTTTATCTCCC +
Preference number: 5 (lower is better)
Translates to: SPPVISISSHSFAQAESVKSTSM*IFSLSP
Trigger: GGGAGATAAACTGAAGATCAACATCGATGTACTTTT...AACGCTTTCAGCCTGAGCAAATGAATGACTTGAGATGGAGATGACTGGAGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411577.5
ENST00000438317.5
CDS-3UTR CAA 90 bp ACTACTAACTTTTGGAGTACTTTGTTACACAGCAGTGGATATCCAATAGCCACTCTCAGGCTGAAAGCGTaGGAATCAACAACCATGACT +
Preference number: 5 (lower is better)
Translates to: TTNFWSTLLHSSGYPIATLRLKA*ESTTMT
Trigger: AGTCATGGTTGTTGATTCCAACGCTTTCAGCCTGAG...AGTGGCTATTGGATATCCACTGCTGTGTAACAAAGTACTCCAAAAGTTAGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411577.5
CDS-3UTR CAA 90 bp AGTCATTCATTTGCTCAGGCTGAAAGCGTTGGAATCAACAACCATGACTTTGCTAACTTTTGGAGTACTTaGTTACACAGCAGTGGATAT +
Preference number: 5 (lower is better)
Translates to: SHSFAQAESVGINNHDFANFWST*LHSSGY
Trigger: ATATCCACTGCTGTGTAACAAAGTACTCCAAAAGTT...AGCAAAGTCATGGTTGTTGATTCCAACGCTTTCAGCCTGAGCAAATGAATGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411577.5
CDS TCA 90 bp AAGGTAAAAGTGGGTACCCACTCTGTACCAGGCATTTTACACATATaGCTTCATTTGATCTTACAATTCCATGTGGTTGGTACTACTGTT +
Preference number: 5 (lower is better)
Translates to: KVKVGTHSVPGILHI*LHLILQFHVVGTTV
Trigger: AACAGTAGTACCAACCACATGGAATTGTAAGATCAAATGAAGTCATATGTGTAAAATGCCTGGTACAGAGTGGGTACCCACTTTTACCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279052.10
CDS GCA 72 bp CGTGTAAGGAGAGAACACAGCACCGTGCTAGTGGCCTaGACTGCAAGGCCTGGCCCGCCAGACCCCCTCTCC +
Preference number: 6 (lower is better)
Translates to: RVRREHSTVLVA*TARPGPPDPLS
Trigger: GGAGAGGGGGTCTGGCGGGCCAGGCCTTGCAGTGCAGGCCACTAGCACGGTGCTGTGTTCTCTCCTTACACG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488384.1
CDS CCA 72 bp ATCCAGCTTTGGGATCTGAGACCCGGCCCCCTCCCCTaGTTACCATGCCGCTCAGCCTCTGAGCTCACGGGG +
Preference number: 6 (lower is better)
Translates to: IQLWDLRPGPLP*LPCRSASELTG
Trigger: CCCCGTGAGCTCAGAGGCTGAGCGGCATGGTAACCAGGGGAGGGGGCCGGGTCTCAGATCCCAAAGCTGGAT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000279052.10
ENST00000486268.5
CDS GCA 72 bp AAGGAGAGAACACAGCACCGTGCTAGTGGCCTGCACTaGAAGGCCTGGCCCGCCAGACCCCCTCTCCTAGTC +
Preference number: 6 (lower is better)
Translates to: KERTQHRASGLH*KAWPARPPLLV
Trigger: GACTAGGAGAGGGGGTCTGGCGGGCCAGGCCTTGCAGTGCAGGCCACTAGCACGGTGCTGTGTTCTCTCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488384.1
CDS CCA 72 bp CAATGGTCACTGCAGGACAAGGGGCGAGGGTCAGAATaGCCTCGAATCCGCTCCCTCAGACACCGGCAGGCC +
Preference number: 6 (lower is better)
Translates to: QWSLQDKGRGSE*PRIRSLRHRQA
Trigger: GGCCTGCCGGTGTCTGAGGGAGCGGATTCGAGGCCATTCTGACCCTCGCCCCTTGTCCTGCAGTGACCATTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461043.6
CDS CCA 72 bp CAGGCTGACGGAACGAAATGCAGGAACTCCAGTGCTTaGCACCGCGCAGGAGACTCTGGTAGGGAGCTCCCT +
Preference number: 6 (lower is better)
Translates to: QADGTKCRNSSA*HRAGDSGRELP
Trigger: AGGGAGCTCCCTACCAGAGTCTCCTGCGCGGTGCCAAGCACTGGAGTTCCTGCATTTCGTTCCGTCAGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475211.1
ENST00000482338.5
CDS CAA 72 bp CCCTCTCGCCGGCACTGCTCAATAGTATCTGGGTTCTaGAAGGCCCAGCCTCTACGGCGATATGCCTCCCGC +
Preference number: 6 (lower is better)
Translates to: PSRRHCSIVSGF*KAQPLRRYASR
Trigger: GCGGGAGGCATATCGCCGTAGAGGCTGGGCCTTCAAGAACCCAGATACTATTGAGCAGTGCCGGCGAGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000413587.5
ENST00000416206.5
ENST00000447986.5
ENST00000461043.6
ENST00000482338.5
ENST00000489071.5
ENST00000496172.5
ENST00000640748.1
CDS CAA 90 bp TGGCTGAAGCCCTCTCGCCGGCACTGCTCAATAGTATCTGGGTTCTaGAAGGCCCAGCCTCTACGGCGATATGCCTCCCGCACATCTTCA +
Preference number: 6 (lower is better)
Translates to: WLKPSRRHCSIVSGF*KAQPLRRYASRTSS
Trigger: TGAAGATGTGCGGGAGGCATATCGCCGTAGAGGCTGGGCCTTCAAGAACCCAGATACTATTGAGCAGTGCCGGCGAGAGGGCTTCAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000413587.5
ENST00000416206.5
ENST00000447986.5
ENST00000461043.6
ENST00000482338.5
ENST00000489071.5
ENST00000496172.5
ENST00000640748.1
CDS CAA 90 bp CATCATGGGCGAGAGCTCATAGAGGACGAAGACTCCGGGAAGGCCTaGGTCGCCCAACAGCCCATTGGCAACCTTCTCATGTCTGGTCAC +
Preference number: 6 (lower is better)
Translates to: HHGRELIEDEDSGKA*VAQQPIGNLLMSGH
Trigger: GTGACCAGACATGAGAAGGTTGCCAATGGGCTGTTGGGCGACCAAGGCCTTCCCGGAGTCTTCGTCCTCTATGAGCTCTCGCCCATGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000416206.5
ENST00000442139.5
ENST00000451605.1
ENST00000465298.1
ENST00000488384.1
ENST00000488935.5
CDS TCA 72 bp GGACACACAAGCAACCCTACTGAGAGGCCCATGTGGTaGGGCACTGAGGCATCCTGCCAACAGCCCTATGAG +
Preference number: 6 (lower is better)
Translates to: GHTSNPTERPMW*GTEASCQQPYE
Trigger: CTCATAGGGCTGTTGGCAGGATGCCTCAGTGCCTCACCACATGGGCCTCTCAGTAGGGTTGCTTGTGTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279052.10
CDS CCA 72 bp CACTTGCTAGCAGATAGGCTTGGGTACATCCAGCTTTaGGATCTGAGACCCGGCCCCCTCCCCTGGTTACCA +
Preference number: 6 (lower is better)
Translates to: HLLADRLGYIQL*DLRPGPLPWLP
Trigger: TGGTAACCAGGGGAGGGGGCCGGGTCTCAGATCCCAAAGCTGGATGTACCCAAGCCTATCTGCTAGCAAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000279052.10
ENST00000486268.5
CDS CCA 72 bp GCTGAAGCCCTCTCGCCGGCACTGCTCAATAGTATCTaGGTTCTTGAAGGCCCAGCCTCTACGGCGATATGC +
Preference number: 6 (lower is better)
Translates to: AEALSPALLNSI*VLEGPASTAIC
Trigger: GCATATCGCCGTAGAGGCTGGGCCTTCAAGAACCCAGATACTATTGAGCAGTGCCGGCGAGAGGGCTTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000413587.5
ENST00000416206.5
ENST00000447986.5
ENST00000461043.6
ENST00000482338.5
ENST00000489071.5
ENST00000496172.5
ENST00000640748.1
CDS CAA 72 bp CGAGAGCTCATAGAGGACGAAGACTCCGGGAAGGCCTaGGTCGCCCAACAGCCCATTGGCAACCTTCTCATG +
Preference number: 6 (lower is better)
Translates to: RELIEDEDSGKA*VAQQPIGNLLM
Trigger: CATGAGAAGGTTGCCAATGGGCTGTTGGGCGACCAAGGCCTTCCCGGAGTCTTCGTCCTCTATGAGCTCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000416206.5
ENST00000442139.5
ENST00000451605.1
ENST00000465298.1
ENST00000488384.1
ENST00000488935.5
CDS CAA 90 bp ACAGCCCATTGGCAACCTTCTCATGTCTGGTCACAGAGAACTGATTaGTCCTCAGTACCTGGGGTGGGAGGGGAGCCTCTCCGTCCACCT +
Preference number: 6 (lower is better)
Translates to: TAHWQPSHVWSQRTD*SSVPGVGGEPLRPP
Trigger: AGGTGGACGGAGAGGCTCCCCTCCCACCCCAGGTACTGAGGACAAATCAGTTCTCTGTGACCAGACATGAGAAGGTTGCCAATGGGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451605.1
CDS CAA 90 bp CCCTCCAGGTGCCAAGTCTTTACAGTTTACCTATCCTGGCAGCATTaGGTGGGTGTTCTCACGGGGGTCCAGGCTGAGAAGCAGCTCTCC +
Preference number: 6 (lower is better)
Translates to: PSRCQVFTVYLSWQH*VGVLTGVQAEKQLS
Trigger: GGAGAGCTGCTTCTCAGCCTGGACCCCCGTGAGAACACCCACCAAATGCTGCCAGGATAGGTAAACTGTAAAGACTTGGCACCTGGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488384.1
CDS GCA 72 bp CTCCGTGCTATCATCTTTAACCTGCACACACACCCGTaGACATGGGACTGCTGGAAGCTCTTCCCAGGGGCA +
Preference number: 6 (lower is better)
Translates to: LRAIIFNLHTHP*TWDCWKLFPGA
Trigger: TGCCCCTGGGAAGAGCTTCCAGCAGTCCCATGTGCACGGGTGTGTGTGCAGGTTAAAGATGATAGCACGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416206.5
CDS GCA 72 bp GGACACAAGCCAGGCTCCGTGCTATCATCTTTAACCTaGACACACACCCGTGCACATGGGACTGCTGGAAGC +
Preference number: 6 (lower is better)
Translates to: GHKPGSVLSSLT*THTRAHGTAGS
Trigger: GCTTCCAGCAGTCCCATGTGCACGGGTGTGTGTGCAGGTTAAAGATGATAGCACGGAGCCTGGCTTGTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416206.5
CDS CCA 72 bp CACCTGTCTTCTCTGCCCCTCATTCCTTCTCCAGCCTaGCACCTCCTGGTCCTGCTTAAGGACAGCCAGAAA +
Preference number: 6 (lower is better)
Translates to: HLSSLPLIPSPA*HLLVLLKDSQK
Trigger: TTTCTGGCTGTCCTTAAGCAGGACCAGGAGGTGCCAGGCTGGAGAAGGAATGAGGGGCAGAGAAGACAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465298.1
CDS TCA 72 bp CCATTGGCAACCTTCTCATGTCTGGTCACAGAGAACTaGTTTGTCCTCAGTACCTGGGGTGGGAGGGGAGCC +
Preference number: 6 (lower is better)
Translates to: PLATFSCLVTEN*FVLSTWGGRGA
Trigger: GGCTCCCCTCCCACCCCAGGTACTGAGGACAAATCAGTTCTCTGTGACCAGACATGAGAAGGTTGCCAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000442139.5
ENST00000451605.1
ENST00000488384.1
CDS GCA 72 bp AAGCTCTGCAAGTCATGGATCTCCACAGCATGTACGTaGACATGGGACTGCTGGAAGCTCTTCCCAGGGGCA +
Preference number: 6 (lower is better)
Translates to: KLCKSWISTACT*TWDCWKLFPGA
Trigger: TGCCCCTGGGAAGAGCTTCCAGCAGTCCCATGTGCACGTACATGCTGTGGAGATCCATGACTTGCAGAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357394.8
CDS CCA 72 bp AGACTCCGGGAAGGCCTTGGTCGCCCAACAGCCCATTaGCAACCTTCTCATGTCTGGTCACAGAGAACTGAT +
Preference number: 6 (lower is better)
Translates to: RLREGLGRPTAH*QPSHVWSQRTD
Trigger: ATCAGTTCTCTGTGACCAGACATGAGAAGGTTGCCAATGGGCTGTTGGGCGACCAAGGCCTTCCCGGAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000413587.5
ENST00000416206.5
ENST00000442139.5
ENST00000451605.1
ENST00000465298.1
ENST00000488384.1
ENST00000488935.5
CDS CCA 72 bp TGCAAGTCATGGATCTCCACAGCATGTACGTGCACATaGGACTGCTGGAAGCTCTTCCCAGGGGCAAAGTGG +
Preference number: 6 (lower is better)
Translates to: CKSWISTACTCT*DCWKLFPGAKW
Trigger: CCACTTTGCCCCTGGGAAGAGCTTCCAGCAGTCCCATGTGCACGTACATGCTGTGGAGATCCATGACTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357394.8
CDS CCA 72 bp GGAGGGGAGCCTCTCCGTCCACCTTCATGTACACAGTaGGCACCACCTTCACAAAGTACTGGAACATCATGG +
Preference number: 6 (lower is better)
Translates to: GGEPLRPPSCTQ*APPSQSTGTSW
Trigger: CCATGATGTTCCAGTACTTTGTGAAGGTGGTGCCCACTGTGTACATGAAGGTGGACGGAGAGGCTCCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451605.1
CDS CCA 72 bp CCCTCCAGGTGCCAAGTCTTTACAGTTTACCTATCCTaGCAGCATTTGGTGGGTGTTCTCACGGGGGTCCAG +
Preference number: 6 (lower is better)
Translates to: PSRCQVFTVYLS*QHLVGVLTGVQ
Trigger: CTGGACCCCCGTGAGAACACCCACCAAATGCTGCCAGGATAGGTAAACTGTAAAGACTTGGCACCTGGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488384.1
CDS TCA 72 bp CACTTGCAAGATCCAAGTGGGGGAAGCCAGTTGCCGTaGTACAAGGACACACAAGCAACCCTACTGAGAGGC +
Preference number: 6 (lower is better)
Translates to: HLQDPSGGSQLP*YKDTQATLLRG
Trigger: GCCTCTCAGTAGGGTTGCTTGTGTGTCCTTGTATCACGGCAACTGGCTTCCCCCACTTGGATCTTGCAAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000279052.10
CDS GCA 72 bp ATCTGGGTTCTTGAAGGCCCAGCCTCTACGGCGATATaGCTCCCGCACATCTTCACAGGTGTTACAGCACTT +
Preference number: 6 (lower is better)
Translates to: IWVLEGPASTAI*LPHIFTGVTAL
Trigger: AAGTGCTGTAACACCTGTGAAGATGTGCGGGAGGCATATCGCCGTAGAGGCTGGGCCTTCAAGAACCCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000413587.5
ENST00000416206.5
ENST00000447986.5
ENST00000461043.6
ENST00000482338.5
ENST00000489071.5
ENST00000496172.5
ENST00000640748.1
CDS GCA 72 bp CCAAAGCTCTGCAAGTCATGGACGTGCACATGGGACTaGTGGAAGCTCTTCCCAGGGGCAAAGTGGAAGTTT +
Preference number: 6 (lower is better)
Translates to: PKLCKSWTCTWD*WKLFPGAKWKF
Trigger: AAACTTCCACTTTGCCCCTGGGAAGAGCTTCCAGCAGTCCCATGTGCACGTCCATGACTTGCAGAGCTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000348547.7
ENST00000413587.5
ENST00000482338.5
ENST00000496172.5
ENST00000640748.1
CDS CCA 72 bp GTTCCACATCCAGCTGCTGTTCTCCGGCCACATCCATaGCATCAATACTCAGATAGGCACAAGGCATGTGCG +
Preference number: 6 (lower is better)
Translates to: VPHPAAVLRPHP*HQYSDRHKACA
Trigger: CGCACATGCCTTGTGCCTATCTGAGTATTGATGCCATGGATGTGGCCGGAGAACAGCAGCTGGATGTGGAAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000279052.10
ENST00000348547.7
ENST00000357394.8
ENST00000411577.5
ENST00000416206.5
ENST00000438317.5
ENST00000447986.5
ENST00000461043.6
ENST00000486268.5
ENST00000496172.5
CDS CCA 72 bp GGTCGCCCAACAGCCCATTGGCAACCTTCTCATGTCTaGTCACAGAGAACTGATTTGTCCTCAGTACCTGGG +
Preference number: 6 (lower is better)
Translates to: GRPTAHWQPSHV*SQRTDLSSVPG
Trigger: CCCAGGTACTGAGGACAAATCAGTTCTCTGTGACCAGACATGAGAAGGTTGCCAATGGGCTGTTGGGCGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000442139.5
ENST00000451605.1
ENST00000488384.1
CDS CCA 72 bp CAGGCAGAAGAGGACCACTCAAGCTCACCAAGAAGGTaGCCAGCATCTAAATCTCCCCAGCTAGTGCAGATC +
Preference number: 6 (lower is better)
Translates to: QAEEDHSSSPRR*PASKSPQLVQI
Trigger: GATCTGCACTAGCTGGGGAGATTTAGATGCTGGCCACCTTCTTGGTGAGCTTGAGTGGTCCTCTTCTGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447986.5
ENST00000489071.5
CDS CCA 72 bp GCCAAGTCTTTACAGTTTACCTATCCTGGCAGCATTTaGTGGGTGTTCTCACGGGGGTCCAGGCTGAGAAGC +
Preference number: 6 (lower is better)
Translates to: AKSLQFTYPGSI*WVFSRGSRLRS
Trigger: GCTTCTCAGCCTGGACCCCCGTGAGAACACCCACCAAATGCTGCCAGGATAGGTAAACTGTAAAGACTTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488384.1
CDS CCA 72 bp ATACTCCGGGAAGGCCTTGGTCGCCCAACAGCCCATTaGCAACCTTCTCATGTCTGGTCACAGAGAACTGAT +
Preference number: 6 (lower is better)
Translates to: ILREGLGRPTAH*QPSHVWSQRTD
Trigger: ATCAGTTCTCTGTGACCAGACATGAGAAGGTTGCCAATGGGCTGTTGGGCGACCAAGGCCTTCCCGGAGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640748.1
CDS CAA 72 bp GAACTGATTTGTCCTCAGTACCTATCCTGGCAGCATTaGGTGGGTGTTCTCACGGGGGTCCAGGCTGAGAAG +
Preference number: 6 (lower is better)
Translates to: ELICPQYLSWQH*VGVLTGVQAEK
Trigger: CTTCTCAGCCTGGACCCCCGTGAGAACACCCACCAAATGCTGCCAGGATAGGTACTGAGGACAAATCAGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488935.5
CDS CAA 90 bp GAGCTCACGGGGATGCCATCTTTATCTAGTCGTTGCTTGAACAGGTaGTGTTCCACATCCAGCTGCTGTTCTCCGGCCACATCCATGGCA +
Preference number: 6 (lower is better)
Translates to: ELTGMPSLSSRCLNR*CSTSSCCSPATSMA
Trigger: TGCCATGGATGTGGCCGGAGAACAGCAGCTGGATGTGGAACACAACCTGTTCAAGCAACGACTAGATAAAGATGGCATCCCCGTGAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000279052.10
ENST00000348547.7
ENST00000357394.8
ENST00000411577.5
ENST00000413587.5
ENST00000416206.5
ENST00000438317.5
ENST00000447986.5
ENST00000461043.6
ENST00000486268.5
ENST00000496172.5
CDS CAA 90 bp TCAGCCTCTGAGCTCACGGGGATGCCATCTTTATCTAGTCGTTGCTaGAACAGGTTGTGTTCCACATCCAGCTGCTGTTCTCCGGCCACA +
Preference number: 6 (lower is better)
Translates to: SASELTGMPSLSSRC*NRLCSTSSCCSPAT
Trigger: TGTGGCCGGAGAACAGCAGCTGGATGTGGAACACAACCTGTTCAAGCAACGACTAGATAAAGATGGCATCCCCGTGAGCTCAGAGGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000279052.10
ENST00000348547.7
ENST00000357394.8
ENST00000411577.5
ENST00000413587.5
ENST00000416206.5
ENST00000438317.5
ENST00000447986.5
ENST00000461043.6
ENST00000486268.5
ENST00000496172.5
CDS TCA 72 bp AAAGTCACACAGCCAGTAAGGTCTGAAACTGGTATCTaGATGCAGGCAGTCTGGCTCCTCGGCCTGTGCTCT +
Preference number: 6 (lower is better)
Translates to: KVTQPVRSETGI*MQAVWLLGLCS
Trigger: AGAGCACAGGCCGAGGAGCCAGACTGCCTGCATTCAGATACCAGTTTCAGACCTTACTGGCTGTGTGACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447986.5
CDS GCA 72 bp TCATGGATCTCCACAGCATGTACGTGCACATGGGACTaGTGGAAGCTCTTCCCAGGGGCAAAGTGGAAGTTT +
Preference number: 6 (lower is better)
Translates to: SWISTACTCTWD*WKLFPGAKWKF
Trigger: AAACTTCCACTTTGCCCCTGGGAAGAGCTTCCAGCAGTCCCATGTGCACGTACATGCTGTGGAGATCCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357394.8
CDS GCA 72 bp ATCTTTAACCTGCACACACACCCGTGCACATGGGACTaGTGGAAGCTCTTCCCAGGGGCAAAGTGGAAGTTT +
Preference number: 6 (lower is better)
Translates to: IFNLHTHPCTWD*WKLFPGAKWKF
Trigger: AAACTTCCACTTTGCCCCTGGGAAGAGCTTCCAGCAGTCCCATGTGCACGGGTGTGTGTGCAGGTTAAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416206.5
CDS CCA 72 bp GGTCGCCCAACAGCCCATTGGCAACCTTCTCATGTCTaGTCACAGAGAACTGATTTGTCCTCAGTACCTCTC +
Preference number: 6 (lower is better)
Translates to: GRPTAHWQPSHV*SQRTDLSSVPL
Trigger: GAGAGGTACTGAGGACAAATCAGTTCTCTGTGACCAGACATGAGAAGGTTGCCAATGGGCTGTTGGGCGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000413587.5
ENST00000416206.5
ENST00000465298.1
ENST00000640748.1
CDS CCA 72 bp CCTGTTGAGCCTCTCCGTCCACCTTCATGTACACAGTaGGCACCACCTTCACAAAGTACTGGAACATCATGG +
Preference number: 6 (lower is better)
Translates to: PVEPLRPPSCTQ*APPSQSTGTSW
Trigger: CCATGATGTTCCAGTACTTTGTGAAGGTGGTGCCCACTGTGTACATGAAGGTGGACGGAGAGGCTCAACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442139.5
CDS CCA 72 bp CCTGACTCACCTCTCCGTCCACCTTCATGTACACAGTaGGCACCACCTTCACAAAGTACTGGAACATCATGG +
Preference number: 6 (lower is better)
Translates to: PDSPLRPPSCTQ*APPSQSTGTSW
Trigger: CCATGATGTTCCAGTACTTTGTGAAGGTGGTGCCCACTGTGTACATGAAGGTGGACGGAGAGGTGAGTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475211.1
ENST00000482338.5
CDS CCA 72 bp AAGTCTTTACAGTTTACCTATCCTGGCAGCATTTGGTaGGTGTTCTCACGGGGGTCCAGGCTGAGAAGCAGC +
Preference number: 6 (lower is better)
Translates to: KSLQFTYPGSIW*VFSRGSRLRSS
Trigger: GCTGCTTCTCAGCCTGGACCCCCGTGAGAACACCCACCAAATGCTGCCAGGATAGGTAAACTGTAAAGACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488384.1
CDS CAA 90 bp GCCAGGGAGAAAGAGGAGACAGAGGAAGCACCGAGGGTGACTACGTaGTCTTCCCTAGATCAATTTTCTTCTGGATGGCTCGTGCTGAGT +
Preference number: 6 (lower is better)
Translates to: AREKEETEEAPRVTT*SSLDQFSSGWLVLS
Trigger: ACTCAGCACGAGCCATCCAGAAGAAAATTGATCTAGGGAAGACAACGTAGTCACCCTCGGTGCTTCCTCTGTCTCCTCTTTCTCCCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000416206.5
ENST00000451605.1
ENST00000488384.1
ENST00000640748.1
CDS CCA 72 bp TCCTCAGTACCTCTCCGTCCACCTTCATGTACACAGTaGGCACCACCTTCACAAAGTACTGGAACATCATGG +
Preference number: 6 (lower is better)
Translates to: SSVPLRPPSCTQ*APPSQSTGTSW
Trigger: CCATGATGTTCCAGTACTTTGTGAAGGTGGTGCCCACTGTGTACATGAAGGTGGACGGAGAGGTACTGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000413587.5
ENST00000416206.5
ENST00000465298.1
ENST00000640748.1
CDS CCA 72 bp GGTCGCCCAACAGCCCATTGGCAACCTTCTCATGTCTaGTCACAGAGAACTGATTTGTCCTCAGTACCTATC +
Preference number: 6 (lower is better)
Translates to: GRPTAHWQPSHV*SQRTDLSSVPI
Trigger: GATAGGTACTGAGGACAAATCAGTTCTCTGTGACCAGACATGAGAAGGTTGCCAATGGGCTGTTGGGCGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488935.5
CDS CAA 72 bp GGGATGCCATCTTTATCTAGTCGTTGCTTGAACAGGTaGTGTTCCACATCCAGCTGCTGTTCTCCGGCCACA +
Preference number: 6 (lower is better)
Translates to: GMPSLSSRCLNR*CSTSSCCSPAT
Trigger: TGTGGCCGGAGAACAGCAGCTGGATGTGGAACACAACCTGTTCAAGCAACGACTAGATAAAGATGGCATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000279052.10
ENST00000348547.7
ENST00000357394.8
ENST00000411577.5
ENST00000413587.5
ENST00000416206.5
ENST00000438317.5
ENST00000447986.5
ENST00000461043.6
ENST00000486268.5
ENST00000496172.5
CDS TCA 72 bp AGCTCACGGGGATGCCATCTTTATCTAGTCGTTGCTTaGACAGGTTGTGTTCCACATCCAGCTGCTGTTCTC +
Preference number: 6 (lower is better)
Translates to: SSRGCHLYLVVA*TGCVPHPAAVL
Trigger: GAGAACAGCAGCTGGATGTGGAACACAACCTGTTCAAGCAACGACTAGATAAAGATGGCATCCCCGTGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000279052.10
ENST00000348547.7
ENST00000357394.8
ENST00000411577.5
ENST00000413587.5
ENST00000416206.5
ENST00000438317.5
ENST00000447986.5
ENST00000461043.6
ENST00000486268.5
ENST00000496172.5
CDS TCA 72 bp CCATTGGCAACCTTCTCATGTCTGGTCACAGAGAACTaGTTTGTCCTCAGTACCTCTCCGTCCACCTTCATG +
Preference number: 6 (lower is better)
Translates to: PLATFSCLVTEN*FVLSTSPSTFM
Trigger: CATGAAGGTGGACGGAGAGGTACTGAGGACAAATCAGTTCTCTGTGACCAGACATGAGAAGGTTGCCAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000413587.5
ENST00000416206.5
ENST00000465298.1
ENST00000640748.1
CDS GCA 72 bp TCTGAGCTCACGGGGATGCCATCTTTATCTAGTCGTTaGTTGAACAGGTTGTGTTCCACATCCAGCTGCTGT +
Preference number: 6 (lower is better)
Translates to: SELTGMPSLSSR*LNRLCSTSSCC
Trigger: ACAGCAGCTGGATGTGGAACACAACCTGTTCAAGCAACGACTAGATAAAGATGGCATCCCCGTGAGCTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000279052.10
ENST00000348547.7
ENST00000357394.8
ENST00000411577.5
ENST00000413587.5
ENST00000416206.5
ENST00000438317.5
ENST00000447986.5
ENST00000461043.6
ENST00000486268.5
ENST00000496172.5
CDS CCA 72 bp ATGTTGATGTTGTCAAGGCCAAAGCTCTGCAAGTCATaGATCTCCACAGCATGTACGTGCACATGGGACTGC +
Preference number: 6 (lower is better)
Translates to: MLMLSRPKLCKS*ISTACTCTWDC
Trigger: GCAGTCCCATGTGCACGTACATGCTGTGGAGATCCATGACTTGCAGAGCTTTGGCCTTGACAACATCAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357394.8
CDS CCA 72 bp GTTCCACATCCAGCTGCTGTTCTCCGGCCACATCCATaGCATCAATACTCAGATCTGGAAGCAGGAAAATCA +
Preference number: 6 (lower is better)
Translates to: VPHPAAVLRPHP*HQYSDLEAGKS
Trigger: TGATTTTCCTGCTTCCAGATCTGAGTATTGATGCCATGGATGTGGCCGGAGAACAGCAGCTGGATGTGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413587.5
CDS CAA 72 bp GAGCTCACGGGGATGCCATCTTTATCTAGTCGTTGCTaGAACAGGTTGTGTTCCACATCCAGCTGCTGTTCT +
Preference number: 6 (lower is better)
Translates to: ELTGMPSLSSRC*NRLCSTSSCCS
Trigger: AGAACAGCAGCTGGATGTGGAACACAACCTGTTCAAGCAACGACTAGATAAAGATGGCATCCCCGTGAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000279052.10
ENST00000348547.7
ENST00000357394.8
ENST00000411577.5
ENST00000413587.5
ENST00000416206.5
ENST00000438317.5
ENST00000447986.5
ENST00000461043.6
ENST00000486268.5
ENST00000496172.5
CDS CAA 72 bp CAGGCACAAGGCATGTGCGGAAAAAGTACATCGATGTaGATCTTCAGTTTATCTCCCCGCGACTTGTCCACG +
Preference number: 6 (lower is better)
Translates to: QAQGMCGKSTSM*IFSLSPRDLST
Trigger: CGTGGACAAGTCGCGGGGAGATAAACTGAAGATCAACATCGATGTACTTTTTCCGCACATGCCTTGTGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413587.5
CDS TCA 72 bp AGGCACAAGGCATGTGCGGAAAAAGTACATCGATGTTaGTCTTCAGTTTATCTCCCCGCGACTTGTCCACGT +
Preference number: 6 (lower is better)
Translates to: RHKACAEKVHRC*SSVYLPATCPR
Trigger: ACGTGGACAAGTCGCGGGGAGATAAACTGAAGATCAACATCGATGTACTTTTTCCGCACATGCCTTGTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000279052.10
ENST00000348547.7
ENST00000357394.8
ENST00000411577.5
ENST00000413587.5
ENST00000416206.5
ENST00000438317.5
ENST00000447986.5
ENST00000461043.6
ENST00000486268.5
ENST00000496172.5
CDS TCA 72 bp CCATTGGCAACCTTCTCATGTCTGGTCACAGAGAACTaGTTTGTCCTCAGTACCTATCCTGGCAGCATTTGG +
Preference number: 6 (lower is better)
Translates to: PLATFSCLVTEN*FVLSTYPGSIW
Trigger: CCAAATGCTGCCAGGATAGGTACTGAGGACAAATCAGTTCTCTGTGACCAGACATGAGAAGGTTGCCAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488935.5
CDS GCA 72 bp GTAGATTCTTCAGTGCCCCATCAATCCTTAGATGACTaGAACCTCGTGAGATACCCTAATCCCGAATCACCC +
Preference number: 6 (lower is better)
Translates to: VDSSVPHQSLDD*NLVRYPNPESP
Trigger: GGGTGATTCGGGATTAGGGTATCTCACGAGGTTGCAGTCATCTAAGGATTGATGGGGCACTGAAGAATCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279052.10
CDS GCA 72 bp CTGGGGCCAGACACAGTGAAATCGGTGGCTCCAGTCTaGACAAGCCCTTTGCTTAGGGATAATAAAAGTTAT +
Preference number: 6 (lower is better)
Translates to: LGPDTVKSVAPV*TSPLLRDNKSY
Trigger: ATAACTTTTATTATCCCTAAGCAAAGGGCTTGTGCAGACTGGAGCCACCGATTTCACTGTGTCTGGCCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489071.5
CDS CCA 72 bp CCTCCACTCCACATCCAGTCCTATAGCAAATTATGTTaGTTCCACTGGTGTCCTGCATTAATCTGCATGCCG +
Preference number: 6 (lower is better)
Translates to: PPLHIQSYSKLC*FHWCPALICMP
Trigger: CGGCATGCAGATTAATGCAGGACACCAGTGGAACCAACATAATTTGCTATAGGACTGGATGTGGAGTGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411577.5
CDS CCA 72 bp CCTCCACTCCACATCCAGTCCTATAGCAAATTATGTTaGTTCCACTGGTGTCCTGCATTAATCATGCCGCTC +
Preference number: 6 (lower is better)
Translates to: PPLHIQSYSKLC*FHWCPALIMPL
Trigger: GAGCGGCATGATTAATGCAGGACACCAGTGGAACCAACATAATTTGCTATAGGACTGGATGTGGAGTGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438317.5
CDS CAA 72 bp AAAGAGGAGACAGAGGAAGCACCGAGGGTGACTACGTaGTCTTCCCTAGATCAATTTTCTTCTGGATGGCTC +
Preference number: 6 (lower is better)
Translates to: KEETEEAPRVTT*SSLDQFSSGWL
Trigger: GAGCCATCCAGAAGAAAATTGATCTAGGGAAGACAACGTAGTCACCCTCGGTGCTTCCTCTGTCTCCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000348547.7
ENST00000357394.8
ENST00000416206.5
ENST00000451605.1
ENST00000488384.1
ENST00000640748.1
CDS GCA 72 bp AAGGTTATGGTTTCTACTTTGTTCTCTCAGCTCACTTaGAAGATCCAAGTGGGGGAAGCCAGTTGCCGTGAT +
Preference number: 6 (lower is better)
Translates to: KVMVSTLFSQLT*KIQVGEASCRD
Trigger: ATCACGGCAACTGGCTTCCCCCACTTGGATCTTGCAAGTGAGCTGAGAGAACAAAGTAGAAACCATAACCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000279052.10
CDS CCA 72 bp ATGTTGATGTTGTCAAGGCCAAAGCTCTGCAAGTCATaGACACAAGCCAGGCTCCGTGCTATCATCTTTAAC +
Preference number: 6 (lower is better)
Translates to: MLMLSRPKLCKS*TQARLRAIIFN
Trigger: GTTAAAGATGATAGCACGGAGCCTGGCTTGTGTCCATGACTTGCAGAGCTTTGGCCTTGACAACATCAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416206.5
CDS TCA 72 bp ATTTTACAGAAGAAGCAACTAAATAGGGCCCAAATATaGCATAGCCCAGGTGTGGCAGAACCTGTGCTCCAA +
Preference number: 6 (lower is better)
Translates to: ILQKKQLNRAQI*HSPGVAEPVLQ
Trigger: TTGGAGCACAGGTTCTGCCACACCTGGGCTATGTCATATTTGGGCCCTATTTAGTTGCTTCTTCTGTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447986.5
CDS CAA 90 bp GACCTATCTTCAAACCTCTGGTATTCAAACTACCATCTGCAGGTATaGAGGACCTCTGAGAATAATAGCCAGGTAGATTACCTGACTCGA +
Preference number: 6 (lower is better)
Translates to: DLSSNLWYSNYHLQV*RTSENNSQVDYLTR
Trigger: TCGAGTCAGGTAATCTACCTGGCTATTATTCTCAGAGGTCCTCAATACCTGCAGATGGTAGTTTGAATACCAGAGGTTTGAAGATAGGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279052.10
CDS TCA 72 bp GAGACAAAGCTAGATGTGAACCCAGGCAATCTGACTTaGGAACCTAAATTCTCATTAAACCACCTGCATTCC +
Preference number: 6 (lower is better)
Translates to: ETKLDVNPGNLT*EPKFSLNHLHS
Trigger: GGAATGCAGGTGGTTTAATGAGAATTTAGGTTCTCAAGTCAGATTGCCTGGGTTCACATCTAGCTTTGTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279052.10
CDS TCA 72 bp TATATACTTATTGTCTATTTCTTTACTAGAATGTTCTaGGGGCACAGATTGTTCACTACTGTACCCTTAGCA +
Preference number: 6 (lower is better)
Translates to: YILIVYFFTRMF*GHRLFTTVPLA
Trigger: TGCTAAGGGTACAGTAGTGAACAATCTGTGCCCTCAGAACATTCTAGTAAAGAAATAGACAATAAGTATATA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447986.5