Pregenerated sensors for ERF (Homo sapiens)
Ensembl gene IDs: ENSG00000105722Ensembl transcript IDs: ENST00000222329.9, ENST00000440177.6, ENST00000593944.5, ENST00000595448.1, ENST00000595941.1, ENST00000596818.1
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CCCCCTCCCTCCCCCTACCACCACTTTGCCCAGAGCTTAGAAACCCACAGAGACAAGAGACAAGAGAGCTaGCCTCACCTCCAGGGCATA | + |
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Preference number: 2 (lower is better) Translates to: PPPSPYHHFAQSLETHRDKRQES*PHLQGI Trigger: TATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTT...GTCTCTGTGGGTTTCTAAGCTCTGGGCAAAGTGGTGGTAGGGGGAGGGAGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| 3UTR-3UTR GCA 90 bp | AGAACAGGGAGGGAGACAAGGCTTTACTTCCTAAGCGATTGTAATAGAAAAGTTAAGAGACAAGAGAGCTaGCCTCACCTCCAGGGCATA | + |
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Preference number: 2 (lower is better) Translates to: RTGRETRLYFLSDCNRKVKRQES*PHLQGI Trigger: TATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTT...AACTTTTCTATTACAATCGCTTAGGAAGTAAAGCCTTGTCTCCCTCCCTGTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222329.9 |
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| 3UTR CCA 72 bp | AGTGGGAGAGGGATAGCAGGCACTTGTAGAGATTTGTaGCCCATGGGCGGCACCCCTCACCCTCCTCCGCCC | + |
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Preference number: 3 (lower is better) Translates to: SGRGIAGTCRDL*PMGGTPHPPPP Trigger: GGGCGGAGGAGGGTGAGGGGTGCCGCCCATGGGCCACAAATCTCTACAAGTGCCTGCTATCCCTCTCCCACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222329.9 |
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| CDS-3UTR GCA 90 bp | GGGAAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGCAGGGCCTTCTCCCCAGCTaGCCGCTGCCGGCGTCCGAG | + |
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Preference number: 4 (lower is better) Translates to: GKRQESCPHLQGIGGLRQGLLPS*PLPASE Trigger: CTCGGACGCCGGCAGCGGGCAGCTGGGGAGAAGGCC...CTGCCTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTTCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS-3UTR GCA 90 bp | GGCAGGGAAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGGGCATGCACTGGGATaGCCCGGGTGCCTCGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: GREETRELPSPPGHRGLKGHALG*PGCLAG Trigger: CCCGGCGAGGCACCCGGGGCATCCCAGTGCATGCCC...CTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTTCCCTGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS-3UTR GCA 90 bp | CCCCCTCCCTCCCCCTACCACCACTTTGCCCAGAGCTTAGAAACCCACAGAGACGGGCATGCACTGGGATaGCCCGGGTGCCTCGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: PPPSPYHHFAQSLETHRDGHALG*PGCLAG Trigger: CCCGGCGAGGCACCCGGGGCATCCCAGTGCATGCCC...GTCTCTGTGGGTTTCTAAGCTCTGGGCAAAGTGGTGGTAGGGGGAGGGAGGGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS-3UTR TCA 90 bp | CCCTCCCTCCCCCTACCACCACTTTGCCCAGAGCTTAGAAACCCACAGAGACAGGGGCACGCGCCGCCGTaGAGGTCACCAGCAGGACCG | + |
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Preference number: 4 (lower is better) Translates to: PSLPLPPLCPELRNPQRQGHAPP*RSPAGP Trigger: CGGTCCTGCTGGTGACCTTCACGGCGGCGCGTGCCC...CTGTCTCTGTGGGTTTCTAAGCTCTGGGCAAAGTGGTGGTAGGGGGAGGGAGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000440177.6 |
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| CDS-3UTR GCA 90 bp | GCAGGGAAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGCTGGGATGCCCCGGGTaGCTCGCCGGGCTCAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: AGKRQESCPHLQGIGGLRLGCPG*LAGLRL Trigger: AAGCCTGAGCCCGGCGAGGCACCCGGGGCATCCCAG...CCTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTTCCCTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS-3UTR CCA 90 bp | GGGAAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGCAGACCACCCGACGGCACTaGCGGGGCACTCTGGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: GKRQESCPHLQGIGGLRQTTRRH*RGTLGH Trigger: GTGCCCCAGAGTGCCCCGCCAGTGCCGTCGGGTGGT...CTGCCTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTTCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS-3UTR CCA 90 bp | GCAGGGAAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGACCACCCGACGGCACTaGCGGGGCACTCTGGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: AGKRQESCPHLQGIGGLRTTRRH*RGTLGH Trigger: GTGCCCCAGAGTGCCCCGCCAGTGCCGTCGGGTGGT...CCTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTTCCCTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS-3UTR CCA 90 bp | CCCCCTCCCTCCCCCTACCACCACTTTGCCCAGAGCTTAGAAACCCACAGAGACAGCGGGGGTCCTCGGTaGGGGACAGCACCTCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PPPSPYHHFAQSLETHRDSGGPR*GTAPRR Trigger: CCTCCGAGGTGCTGTCCCCCACCGAGGACCCCCGCT...GTCTCTGTGGGTTTCTAAGCTCTGGGCAAAGTGGTGGTAGGGGGAGGGAGGGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS-3UTR CCA 90 bp | GGGAAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGCAGAGCGGGGGTCCTCGGTaGGGGACAGCACCTCGGAGG | + |
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Preference number: 4 (lower is better) Translates to: GKRQESCPHLQGIGGLRQSGGPR*GTAPRR Trigger: CCTCCGAGGTGCTGTCCCCCACCGAGGACCCCCGCT...CTGCCTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTTCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS-3UTR CCA 90 bp | CCCTCCCTCCCCCTACCACCACTTTGCCCAGAGCTTAGAAACCCACAGAGACAGATCCGGAGGGCCGGGTaGTCGGGCGCGGGGATCCTC | + |
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Preference number: 4 (lower is better) Translates to: PSLPLPPLCPELRNPQRQIRRAG*SGAGIL Trigger: GAGGATCCCCGCGCCCGACCACCCGGCCCTCCGGAT...CTGTCTCTGTGGGTTTCTAAGCTCTGGGCAAAGTGGTGGTAGGGGGAGGGAGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS-3UTR CCA 90 bp | GCAGGGAAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGCGGGAAGGCAAACCCTaGTGCAGGGCACGCGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: AGKRQESCPHLQGIGGLRREGKP*CRARAA Trigger: GGCGGCGCGTGCCCTGCACCAGGGTTTGCCTTCCCG...CCTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTTCCCTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000440177.6 |
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| CDS-3UTR TCA 90 bp | GGCAGGGAAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGACACAGGGAAGGGGCTaGGGGGTTCAGGGCCACCCC | + |
|
Preference number: 4 (lower is better) Translates to: GREETRELPSPPGHRGLKTQGRG*GVQGHP Trigger: GGGGTGGCCCTGAACCCCTCAGCCCCTTCCCTGTGT...CTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTTCCCTGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS-3UTR CCA 90 bp | GGGAAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGCAGAAGACACCAGGGTCATaGGGCAGGCGGGCCAGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GKRQESCPHLQGIGGLRQKTPGS*GRRASG Trigger: CCCGCTGGCCCGCCTGCCCCATGACCCTGGTGTCTT...CTGCCTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTTCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS-3UTR CCA 90 bp | GCAGGGAAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGGGTGGGTGGGCGTCATaGGCAGAGCCGGGGAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: AGKRQESCPHLQGIGGLRGGWAS*AEPGRA Trigger: AGCTCTCCCCGGCTCTGCCCATGACGCCCACCCACC...CCTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTTCCCTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS-3UTR CCA 90 bp | GGCAGGGAAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGGTGGGTGGGCGTCATaGGCAGAGCCGGGGAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: GREETRELPSPPGHRGLKGGWAS*AEPGRA Trigger: AGCTCTCCCCGGCTCTGCCCATGACGCCCACCCACC...CTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTTCCCTGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS-3UTR CCA 90 bp | GAAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGCAGCACGAGGAGGGGACCGGTaGGGTCTCGGGTGCCATGGG | + |
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Preference number: 4 (lower is better) Translates to: EETRELPSPPGHRGLKAARGGDR*GLGCHG Trigger: CCCATGGCACCCGAGACCCCACCGGTCCCCTCCTCG...TGCTGCCTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS-3UTR CCA 90 bp | GCAGGGAAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGCCACCCGCCTGCCCATaGGCCAGTCCTAGGAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: AGKRQESCPHLQGIGGLRPPACP*ASPRSS Trigger: GCTGCTCCTAGGACTGGCCCATGGGCAGGCGGGTGG...CCTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTTCCCTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000222329.9 |
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| 3UTR CAA 72 bp | GGGAGTGGGAGAGGGATAGCAGGCACTTGTAGAGATTaGTGGCCCATGGGCGGCACCCCTCACCCTCCTCCG | + |
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Preference number: 4 (lower is better) Translates to: GSGRGIAGTCRD*WPMGGTPHPPP Trigger: CGGAGGAGGGTGAGGGGTGCCGCCCATGGGCCACAAATCTCTACAAGTGCCTGCTATCCCTCTCCCACTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222329.9 |
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| CDS-3UTR TCA 90 bp | CCCCCTCCCTCCCCCTACCACCACTTTGCCCAGAGCTTAGAAACCCACAGAGACCACCTCGGAGGGCGTTaGGGGAGGGAAGCGGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PPPSPYHHFAQSLETHRDHLGGR*GREAEV Trigger: CACTTCCGCTTCCCTCCCTCAACGCCCTCCGAGGTG...GTCTCTGTGGGTTTCTAAGCTCTGGGCAAAGTGGTGGTAGGGGGAGGGAGGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS-3UTR TCA 90 bp | CCCTCCCTCCCCCTACCACCACTTTGCCCAGAGCTTAGAAACCCACAGAGACAGACACAGGGAAGGGGCTaGGGGGTTCAGGGCCACCCC | + |
|
Preference number: 4 (lower is better) Translates to: PSLPLPPLCPELRNPQRQTQGRG*GVQGHP Trigger: GGGGTGGCCCTGAACCCCTCAGCCCCTTCCCTGTGT...CTGTCTCTGTGGGTTTCTAAGCTCTGGGCAAAGTGGTGGTAGGGGGAGGGAGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS-3UTR TCA 90 bp | GGCAGGGAAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGGAAGGCGCGGGGGCTaGGGTGGTAGTTGTAGACGC | + |
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Preference number: 4 (lower is better) Translates to: GREETRELPSPPGHRGLKGRRGG*GGSCRR Trigger: GCGTCTACAACTACCACCTCAGCCCCCGCGCCTTCC...CTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTTCCCTGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS-3UTR TCA 90 bp | CCCCCTCCCTCCCCCTACCACCACTTTGCCCAGAGCTTAGAAACCCACAGAGACAGATGGGCTCCACCTTaGTCTGTGGTGGCGGGGGCG | + |
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Preference number: 4 (lower is better) Translates to: PPPSPYHHFAQSLETHRDRWAPP*SVVAGA Trigger: CGCCCCCGCCACCACAGATCAAGGTGGAGCCCATCT...GTCTCTGTGGGTTTCTAAGCTCTGGGCAAAGTGGTGGTAGGGGGAGGGAGGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS-3UTR TCA 90 bp | GGGAAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGCAGAGATGGGCTCCACCTTaGTCTGTGGTGGCGGGGGCG | + |
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Preference number: 4 (lower is better) Translates to: GKRQESCPHLQGIGGLRQRWAPP*SVVAGA Trigger: CGCCCCCGCCACCACAGATCAAGGTGGAGCCCATCT...CTGCCTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTTCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS-3UTR TCA 90 bp | CCCCCTCCCTCCCCCTACCACCACTTTGCCCAGAGCTTAGAAACCCACAGAGACGGGCACGGGGCGTCTTaGACACCTCCCCGTCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: PPPSPYHHFAQSLETHRDGHGAS*TPPRLP Trigger: AGGAAGACGGGGAGGTGTTCAAGACGCCCCGTGCCC...GTCTCTGTGGGTTTCTAAGCTCTGGGCAAAGTGGTGGTAGGGGGAGGGAGGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS-3UTR GCA 90 bp | GCAGGGAAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGCCAGCCCGCCTGCACTaGCACCGCTCTTGTCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: AGKRQESCPHLQGIGGLRPARLH*HRSCQH Trigger: GTGCTGACAAGAGCGGTGGCAGTGCAGGCGGGCTGG...CCTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTTCCCTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS-3UTR GCA 90 bp | AAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGCAGCAACTGGGATGCCCCGGGTaGCTCGCCGGGCTCAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: KRQESCPHLQGIGGLRQQLGCPG*LAGLRL Trigger: AAGCCTGAGCCCGGCGAGGCACCCGGGGCATCCCAG...TTGCTGCCTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS-3UTR GCA 90 bp | GAAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGCAGCAGAAGGCAAACCCTGGTaGAGGGCACGCGCCGCCGTG | + |
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Preference number: 4 (lower is better) Translates to: EETRELPSPPGHRGLKAAEGKPW*RARAAV Trigger: CACGGCGGCGCGTGCCCTGCACCAGGGTTTGCCTTC...TGCTGCCTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000440177.6 |
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| CDS-3UTR CCA 90 bp | CCCCCTCCCTCCCCCTACCACCACTTTGCCCAGAGCTTAGAAACCCACAGAGACTGTAGGCCAGGTGGGTaGGCGTCATGGGCAGAGCCG | + |
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Preference number: 4 (lower is better) Translates to: PPPSPYHHFAQSLETHRDCRPGG*ASWAEP Trigger: CGGCTCTGCCCATGACGCCCACCCACCTGGCCTACA...GTCTCTGTGGGTTTCTAAGCTCTGGGCAAAGTGGTGGTAGGGGGAGGGAGGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS-3UTR CCA 90 bp | CCCTCCCTCCCCCTACCACCACTTTGCCCAGAGCTTAGAAACCCACAGAGACAGGGGTCTCGGGTGCCATaGGCGGCAGCGGGCACTTGT | + |
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Preference number: 4 (lower is better) Translates to: PSLPLPPLCPELRNPQRQGSRVP*AAAGTC Trigger: ACAAGTGCCCGCTGCCGCCCATGGCACCCGAGACCC...CTGTCTCTGTGGGTTTCTAAGCTCTGGGCAAAGTGGTGGTAGGGGGAGGGAGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS-3UTR CCA 90 bp | AAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGCAGCAACGAGGAGGGGACCGGTaGGGTCTCGGGTGCCATGGG | + |
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Preference number: 4 (lower is better) Translates to: KRQESCPHLQGIGGLRQQRGGDR*GLGCHG Trigger: CCCATGGCACCCGAGACCCCACCGGTCCCCTCCTCG...TTGCTGCCTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS-3UTR CCA 90 bp | GGCAGGGAAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGCTGCCGGCGTCCGAGTaGGGGCGGCTGGAGCTTAAA | + |
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Preference number: 4 (lower is better) Translates to: GREETRELPSPPGHRGLKLPASE*GRLELK Trigger: TTTAAGCTCCAGCCGCCCCCACTCGGACGCCGGCAG...CTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTTCCCTGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS-3UTR CCA 90 bp | CCCCCTCCCTCCCCCTACCACCACTTTGCCCAGAGCTTAGAAACCCACAGAGACTTGAGGGGCATGCACTaGGATGCCCCGGGTGCCTCG | + |
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Preference number: 4 (lower is better) Translates to: PPPSPYHHFAQSLETHRDLRGMH*DAPGAS Trigger: CGAGGCACCCGGGGCATCCCAGTGCATGCCCCTCAA...GTCTCTGTGGGTTTCTAAGCTCTGGGCAAAGTGGTGGTAGGGGGAGGGAGGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS-3UTR CCA 90 bp | GGCAGGGAAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGTGGGCCGTGGCATGCTaGAGGTCAGAGCTCACCCGC | + |
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Preference number: 4 (lower is better) Translates to: GREETRELPSPPGHRGLKWAVAC*RSELTR Trigger: GCGGGTGAGCTCTGACCTCCAGCATGCCACGGCCCA...CTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTTCCCTGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS-3UTR CCA 90 bp | CCCCCTCCCTCCCCCTACCACCACTTTGCCCAGAGCTTAGAAACCCACAGAGACTGGGCCGTGGCATGCTaGAGGTCAGAGCTCACCCGC | + |
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Preference number: 4 (lower is better) Translates to: PPPSPYHHFAQSLETHRDWAVAC*RSELTR Trigger: GCGGGTGAGCTCTGACCTCCAGCATGCCACGGCCCA...GTCTCTGTGGGTTTCTAAGCTCTGGGCAAAGTGGTGGTAGGGGGAGGGAGGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS-3UTR CCA 90 bp | GGGAAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGCAGTGCTCCAGGGAGAGCTaGGCCGTGGCATGCTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: GKRQESCPHLQGIGGLRQCSRES*AVACWR Trigger: CCTCCAGCATGCCACGGCCCAGCTCTCCCTGGAGCA...CTGCCTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTTCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS-3UTR CCA 90 bp | AAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGCAGCAAGCACTCATGGCCCCCTaGAGGGGCAGGGCAGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: KRQESCPHLQGIGGLRQQALMAP*RGRAGR Trigger: CCTGCCTGCCCTGCCCCTCCAGGGGGCCATGAGTGC...TTGCTGCCTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000222329.9 |
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| CDS-3UTR TCA 90 bp | CCCTCCCTCCCCCTACCACCACTTTGCCCAGAGCTTAGAAACCCACAGAGACAGCACCTCGGAGGGCGTTaGGGGAGGGAAGCGGAAGTG | + |
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Preference number: 4 (lower is better) Translates to: PSLPLPPLCPELRNPQRQHLGGR*GREAEV Trigger: CACTTCCGCTTCCCTCCCTCAACGCCCTCCGAGGTG...CTGTCTCTGTGGGTTTCTAAGCTCTGGGCAAAGTGGTGGTAGGGGGAGGGAGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS-3UTR TCA 90 bp | CCCTCCCTCCCCCTACCACCACTTTGCCCAGAGCTTAGAAACCCACAGAGACAGGGGCACGGGGCGTCTTaGACACCTCCCCGTCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: PSLPLPPLCPELRNPQRQGHGAS*TPPRLP Trigger: AGGAAGACGGGGAGGTGTTCAAGACGCCCCGTGCCC...CTGTCTCTGTGGGTTTCTAAGCTCTGGGCAAAGTGGTGGTAGGGGGAGGGAGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS-3UTR TCA 90 bp | GGCAGGGAAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGAGGAGCAGCTGGGGATaGAGGGGTTGGACCGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: GREETRELPSPPGHRGLKRSSWG*RGWTGA Trigger: AGCACCGGTCCAACCCCTTCATCCCCAGCTGCTCCT...CTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTTCCCTGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000222329.9 |
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| CDS-3UTR GCA 90 bp | CCCTCCCTCCCCCTACCACCACTTTGCCCAGAGCTTAGAAACCCACAGAGACAGCCAGCCCGCCTGCACTaGCACCGCTCTTGTCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: PSLPLPPLCPELRNPQRQPARLH*HRSCQH Trigger: GTGCTGACAAGAGCGGTGGCAGTGCAGGCGGGCTGG...CTGTCTCTGTGGGTTTCTAAGCTCTGGGCAAAGTGGTGGTAGGGGGAGGGAGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS-3UTR GCA 90 bp | GGGAAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGCAGAGCTGGGCCGTGGCATaGTGGAGGTCAGAGCTCACC | + |
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Preference number: 4 (lower is better) Translates to: GKRQESCPHLQGIGGLRQSWAVA*WRSELT Trigger: GGTGAGCTCTGACCTCCAGCATGCCACGGCCCAGCT...CTGCCTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTTCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS-3UTR CCA 90 bp | GCAGGGAAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGACATCGGGCTCAGCGTaGGCGAGGGAGTGTAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: AGKRQESCPHLQGIGGLRTSGSA*ARECRP Trigger: TGGCCTACACTCCCTCGCCCACGCTGAGCCCGATGT...CCTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTTCCCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS-3UTR CCA 90 bp | CCCTCCCTCCCCCTACCACCACTTTGCCCAGAGCTTAGAAACCCACAGAGACAGGGGCTGAAGGAGAAGTaGGAGCCTCCCCCTGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: PSLPLPPLCPELRNPQRQGLKEK*EPPPEP Trigger: CGGCTCAGGGGGAGGCTCCCACTTCTCCTTCAGCCC...CTGTCTCTGTGGGTTTCTAAGCTCTGGGCAAAGTGGTGGTAGGGGGAGGGAGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
||
| CDS-3UTR CCA 90 bp | AAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGCAGCAAGGGTCTCGGGTGCCATaGGCGGCAGCGGGCACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KRQESCPHLQGIGGLRQQGSRVP*AAAGTC Trigger: ACAAGTGCCCGCTGCCGCCCATGGCACCCGAGACCC...TTGCTGCCTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
||
| CDS-3UTR CCA 90 bp | CCCTCCCTCCCCCTACCACCACTTTGCCCAGAGCTTAGAAACCCACAGAGACAGCTGCCGGCGTCCGAGTaGGGGCGGCTGGAGCTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: PSLPLPPLCPELRNPQRQLPASE*GRLELK Trigger: TTTAAGCTCCAGCCGCCCCCACTCGGACGCCGGCAG...CTGTCTCTGTGGGTTTCTAAGCTCTGGGCAAAGTGGTGGTAGGGGGAGGGAGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
||
| CDS-3UTR CCA 90 bp | GAAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGCAGCATTGAGGGGCATGCACTaGGATGCCCCGGGTGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: EETRELPSPPGHRGLKAALRGMH*DAPGAS Trigger: CGAGGCACCCGGGGCATCCCAGTGCATGCCCCTCAA...TGCTGCCTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
||
| CDS-3UTR CCA 90 bp | CCCTCCCTCCCCCTACCACCACTTTGCCCAGAGCTTAGAAACCCACAGAGACAGTGCTCCAGGGAGAGCTaGGCCGTGGCATGCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PSLPLPPLCPELRNPQRQCSRES*AVACWR Trigger: CCTCCAGCATGCCACGGCCCAGCTCTCCCTGGAGCA...CTGTCTCTGTGGGTTTCTAAGCTCTGGGCAAAGTGGTGGTAGGGGGAGGGAGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
||
| CDS-3UTR TCA 90 bp | GGCAGGGAAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGCATCACTACAGTCACTaGCTGAGCCTCGGCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GREETRELPSPPGHRGLKHHYSH*LSLGPG Trigger: GCCTGGGCCGAGGCTCAGTCAGTGACTGTAGTGATG...CTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTTCCCTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
||
| CDS-3UTR TCA 90 bp | AAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGCAGCAAGGAAGGCGCGGGGGCTaGGGTGGTAGTTGTAGACGC | + |
|
Preference number: 4 (lower is better) Translates to: KRQESCPHLQGIGGLRQQGRRGG*GGSCRR Trigger: GCGTCTACAACTACCACCTCAGCCCCCGCGCCTTCC...TTGCTGCCTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
||
| CDS-3UTR CCA 90 bp | GAAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGCAGCAGGAGGGAAGCGGAAGTaGCTACCACCCGACGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: EETRELPSPPGHRGLKAAGGKRK*LPPDGT Trigger: AGTGCCGTCGGGTGGTAGCCACTTCCGCTTCCCTCC...TGCTGCCTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
||
| CDS-3UTR CCA 90 bp | AAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGCAGCAATGTAGGCCAGGTGGGTaGGCGTCATGGGCAGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: KRQESCPHLQGIGGLRQQCRPGG*ASWAEP Trigger: CGGCTCTGCCCATGACGCCCACCCACCTGGCCTACA...TTGCTGCCTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
||
| CDS-3UTR CCA 90 bp | AAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGCAGCAAGGGAGAGCTGGGCCGTaGCATGCTGGAGGTCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KRQESCPHLQGIGGLRQQGRAGP*HAGGQS Trigger: GCTCTGACCTCCAGCATGCCACGGCCCAGCTCTCCC...TTGCTGCCTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
||
| CDS-3UTR CCA 90 bp | GAAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGCAGCAGAGATTTGTGGCCCATaGGCGGCACCCCTCACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: EETRELPSPPGHRGLKAAEICGP*AAPLTL Trigger: GAGGGTGAGGGGTGCCGCCCATGGGCCACAAATCTC...TGCTGCCTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000222329.9 |
||
| CDS-3UTR TCA 90 bp | CCCTCCCTCCCCCTACCACCACTTTGCCCAGAGCTTAGAAACCCACAGAGACAGCATCACTACAGTCACTaGCTGAGCCTCGGCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PSLPLPPLCPELRNPQRQHHYSH*LSLGPG Trigger: GCCTGGGCCGAGGCTCAGTCAGTGACTGTAGTGATG...CTGTCTCTGTGGGTTTCTAAGCTCTGGGCAAAGTGGTGGTAGGGGGAGGGAGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
||
| CDS-3UTR TCA 90 bp | GCAGGGAAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGTCATGTCCTCAGGGCTaGAGGAGAAGTGGGAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: AGKRQESCPHLQGIGGLRSCPQG*RRSGSL Trigger: GAGGCTCCCACTTCTCCTTCAGCCCTGAGGACATGA...CCTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTTCCCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
||
| CDS-3UTR TCA 90 bp | CCCCCTCCCTCCCCCTACCACCACTTTGCCCAGAGCTTAGAAACCCACAGAGACAGAAGAAGAAGAGGATaGCGAGGCCGAGGAGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: PPPSPYHHFAQSLETHRDRRRRG*RGRGGD Trigger: GTCCCCTCCTCGGCCTCGTCATCCTCTTCTTCTTCT...GTCTCTGTGGGTTTCTAAGCTCTGGGCAAAGTGGTGGTAGGGGGAGGGAGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
||
| CDS-3UTR CCA 90 bp | AAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGCAGCAAACATCGGGCTCAGCGTaGGCGAGGGAGTGTAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KRQESCPHLQGIGGLRQQTSGSA*ARECRP Trigger: TGGCCTACACTCCCTCGCCCACGCTGAGCCCGATGT...TTGCTGCCTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
||
| CDS-3UTR CCA 90 bp | GGGAAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGCAGAGGGGGCTTCCAGTTTaGTTTCAGGGCACCCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GKRQESCPHLQGIGGLRQRGLPV*FQGTPF Trigger: GAAGGGGGTGCCCTGAAACCAAACTGGAAGCCCCCT...CTGCCTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTTCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000222329.9 |
||
| CDS-3UTR TCA 90 bp | CCCTCCCTCCCCCTACCACCACTTTGCCCAGAGCTTAGAAACCCACAGAGACAGCGGTTCCTCCAGCTCTaGCGTGCCATCACTACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PSLPLPPLCPELRNPQRQRFLQL*RAITTV Trigger: GACTGTAGTGATGGCACGTCAGAGCTGGAGGAACCG...CTGTCTCTGTGGGTTTCTAAGCTCTGGGCAAAGTGGTGGTAGGGGGAGGGAGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
||
| CDS-3UTR CCA 90 bp | CCCTCCCTCCCCCTACCACCACTTTGCCCAGAGCTTAGAAACCCACAGAGACAGCCGAGTGGGGGCGGCTaGAGCTTAAACTTGAATGGG | + |
|
Preference number: 4 (lower is better) Translates to: PSLPLPPLCPELRNPQRQPSGGG*SLNLNG Trigger: CCCATTCAAGTTTAAGCTCCAGCCGCCCCCACTCGG...CTGTCTCTGTGGGTTTCTAAGCTCTGGGCAAAGTGGTGGTAGGGGGAGGGAGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
||
| CDS-3UTR TCA 90 bp | AAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGCAGCAATCATGTCCTCAGGGCTaGAGGAGAAGTGGGAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KRQESCPHLQGIGGLRQQSCPQG*RRSGSL Trigger: GAGGCTCCCACTTCTCCTTCAGCCCTGAGGACATGA...TTGCTGCCTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
||
| CDS-3UTR TCA 90 bp | AAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGCAGCAAAGAAGAAGAAGAGGATaGCGAGGCCGAGGAGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: KRQESCPHLQGIGGLRQQRRRRG*RGRGGD Trigger: GTCCCCTCCTCGGCCTCGTCATCCTCTTCTTCTTCT...TTGCTGCCTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
||
| CDS-3UTR GCA 90 bp | GCAGGGAAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGAATTCATCTGGGGCTTaGACTTGCGAACGCCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: AGKRQESCPHLQGIGGLRNSSGA*TCERPT Trigger: TGTGGGGCGTTCGCAAGTGCAAGCCCCAGATGAATT...CCTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTTCCCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
||
| CDS-3UTR GCA 90 bp | GGGAAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGCAGAAGAGACAAGAGAGCTaGCCTCACCTCCAGGGCATA | + |
|
Preference number: 4 (lower is better) Translates to: GKRQESCPHLQGIGGLRQKRQES*PHLQGI Trigger: TATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTT...CTGCCTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
||
| CDS-3UTR CCA 90 bp | AAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGCAGCAACCGAGTGGGGGCGGCTaGAGCTTAAACTTGAATGGG | + |
|
Preference number: 4 (lower is better) Translates to: KRQESCPHLQGIGGLRQQPSGGG*SLNLNG Trigger: CCCATTCAAGTTTAAGCTCCAGCCGCCCCCACTCGG...TTGCTGCCTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
||
| CDS-3UTR TCA 90 bp | GCAGGGAAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGCCTCATCCTCATCACTaGTGTCAGTCACCTCTACCT | + |
|
Preference number: 4 (lower is better) Translates to: AGKRQESCPHLQGIGGLRPHPHH*CQSPLP Trigger: AGGTAGAGGTGACTGACATCAGTGATGAGGATGAGG...CCTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTTCCCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
||
| CDS-3UTR GCA 90 bp | GAAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGCAGCAAATTCATCTGGGGCTTaGACTTGCGAACGCCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: EETRELPSPPGHRGLKAANSSGA*TCERPT Trigger: TGTGGGGCGTTCGCAAGTGCAAGCCCCAGATGAATT...TGCTGCCTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
||
| CDS-3UTR CCA 90 bp | AAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGCAGCAAACTTGTAGAGATTTGTaGCCCATGGGCGGCACCCCT | + |
|
Preference number: 4 (lower is better) Translates to: KRQESCPHLQGIGGLRQQTCRDL*PMGGTP Trigger: AGGGGTGCCGCCCATGGGCCACAAATCTCTACAAGT...TTGCTGCCTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000222329.9 |
||
| CDS-3UTR TCA 90 bp | GAAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGCAGCACCTCATCCTCATCACTaGTGTCAGTCACCTCTACCT | + |
|
Preference number: 4 (lower is better) Translates to: EETRELPSPPGHRGLKAAPHPHH*CQSPLP Trigger: AGGTAGAGGTGACTGACATCAGTGATGAGGATGAGG...TGCTGCCTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
||
| CDS-3UTR GCA 90 bp | AAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGCAGCAAAAGAGACAAGAGAGCTaGCCTCACCTCCAGGGCATA | + |
|
Preference number: 4 (lower is better) Translates to: KRQESCPHLQGIGGLRQQKRQES*PHLQGI Trigger: TATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTT...TTGCTGCCTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
||
| CDS-3UTR CCA 90 bp | CCCTCCCTCCCCCTACCACCACTTTGCCCAGAGCTTAGAAACCCACAGAGACAGCCCCACATCAATGAATaGGTAATTGACCAGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: PSLPLPPLCPELRNPQRQPHINE*VIDQHQ Trigger: CTGGTGCTGGTCAATTACCCATTCATTGATGTGGGG...CTGTCTCTGTGGGTTTCTAAGCTCTGGGCAAAGTGGTGGTAGGGGGAGGGAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
||
| CDS-3UTR CCA 90 bp | GAAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGCAGCACCCCACATCAATGAATaGGTAATTGACCAGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: EETRELPSPPGHRGLKAAPHINE*VIDQHQ Trigger: CTGGTGCTGGTCAATTACCCATTCATTGATGTGGGG...TGCTGCCTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
||
| CDS-3UTR GCA 90 bp | GGGAAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGCAGTGGTCTTGTGCAGAATaGGCTTGTTATAGTAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: GKRQESCPHLQGIGGLRQWSCAE*ACYSNS Trigger: GCTATTACTATAACAAGCGCATTCTGCACAAGACCA...CTGCCTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTTCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
||
| CDS-3UTR CCA 90 bp | AGAACAGGGAGGGAGACAAGGCTTTACTTCCTAAGCGATTGTAATAGAAAAGTTAAGACACCAGGGTCATaGGGCAGGCGGGCCAGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: RTGRETRLYFLSDCNRKVKTPGS*GRRASG Trigger: CCCGCTGGCCCGCCTGCCCCATGACCCTGGTGTCTT...AACTTTTCTATTACAATCGCTTAGGAAGTAAAGCCTTGTCTCCCTCCCTGTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222329.9 |
||
| CDS-3UTR CCA 90 bp | AGAACAGGGAGGGAGACAAGGCTTTACTTCCTAAGCGATTGTAATAGAAAAGTTGAGGAGGGCTGGGAGTaGGGCAGAGCGGGTGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RTGRETRLYFLSDCNRKVEEGWE*GRAGGS Trigger: TGACCCACCCGCTCTGCCCCACTCCCAGCCCTCCTC...AACTTTTCTATTACAATCGCTTAGGAAGTAAAGCCTTGTCTCCCTCCCTGTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222329.9 |
||
| CDS-3UTR GCA 90 bp | AAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGCAGCAATGGTCTTGTGCAGAATaGGCTTGTTATAGTAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: KRQESCPHLQGIGGLRQQWSCAE*ACYSNS Trigger: GCTATTACTATAACAAGCGCATTCTGCACAAGACCA...TTGCTGCCTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
||
| CDS-3UTR GCA 90 bp | AGAACAGGGAGGGAGACAAGGCTTTACTTCCTAAGCGATTGTAATAGAAAAGTTCTTTGGGTGTGGGCCTaGAGGTACCGTTTCATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RTGRETRLYFLSDCNRKVLWVWA*RYRFMS Trigger: GGACATGAAACGGTACCTGCAGGCCCACACCCAAAG...AACTTTTCTATTACAATCGCTTAGGAAGTAAAGCCTTGTCTCCCTCCCTGTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222329.9 |
||
| CDS-3UTR CCA 90 bp | AGAACAGGGAGGGAGACAAGGCTTTACTTCCTAAGCGATTGTAATAGAAAAGTTCCTGCTGTGACCTTGTaGGGTATGAGAAACCTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RTGRETRLYFLSDCNRKVPAVTL*GMRNLG Trigger: GCCTAGGTTTCTCATACCCCACAAGGTCACAGCAGG...AACTTTTCTATTACAATCGCTTAGGAAGTAAAGCCTTGTCTCCCTCCCTGTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222329.9 |
||
| CDS CCA 90 bp | CCTTGGGTAGAGGTTGGCGGTGGGCTGGCTGGTCTCTGGAGGGGGTaGGCAGCCCGCACACAGGAGCCCGAGCCGCCGCCGCCGCCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: PWVEVGGGLAGLWRG*AARTQEPEPPPPPP Trigger: CGGCGGCGGCGGCGGCGGCTCGGGCTCCTGTGTGCGGGCTGCCCACCCCCTCCAGAGACCAGCCAGCCCACCGCCAACCTCTACCCAAGG 77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000595941.1 |
||
| CDS CCA 90 bp | AAGGCAAACCCTTGGGTAGAGGTTGGCGGTGGGCTGGCTGGTCTCTaGAGGGGGTGGGCAGCCCGCACACAGGAGCCCGAGCCGCCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: KANPWVEVGGGLAGL*RGWAARTQEPEPPP Trigger: CGGCGGCGGCTCGGGCTCCTGTGTGCGGGCTGCCCACCCCCTCCAGAGACCAGCCAGCCCACCGCCAACCTCTACCCAAGGGTTTGCCTT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000595941.1 |
||
| CDS GCA 90 bp | TGCGGGGCACACAGGTCCCCTGCCCACAGCCCTCAGGAGTCTCGGTaGTCCAGGGAGAGCTGGGCCGTGGCATGCTGGAGGTCAGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: CGAHRSPAHSPQESR*SRESWAVACWRSEL Trigger: GAGCTCTGACCTCCAGCATGCCACGGCCCAGCTCTCCCTGGAGCACCGAGACTCCTGAGGGCTGTGGGCAGGGGACCTGTGTGCCCCGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
||
| CDS CCA 90 bp | TCCCCTGCCCACAGCCCTCAGGAGTCTCGGTGCTCCAGGGAGAGCTaGGCCGTGGCATGCTGGAGGTCAGAGCTCACCCGCCTTGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SPAHSPQESRCSRES*AVACWRSELTRLGV Trigger: CACCCCAAGGCGGGTGAGCTCTGACCTCCAGCATGCCACGGCCCAGCTCTCCCTGGAGCACCGAGACTCCTGAGGGCTGTGGGCAGGGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
||
| CDS GCA 90 bp | CCGCTCTTGTCAGCACCGGCTACGGCCTTCTCCCCAGCTGCCCGCTaGCGGCGTCCGAGTGGGGGCGGCTGGAGCTTAAACTTGAATGGG | + |
|
Preference number: 5 (lower is better) Translates to: PLLSAPATAFSPAAR*RRPSGGGWSLNLNG Trigger: CCCATTCAAGTTTAAGCTCCAGCCGCCCCCACTCGGACGCCGGCAGCGGGCAGCTGGGGAGAAGGCCGTAGCCGGTGCTGACAAGAGCGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
||
| CDS GCA 90 bp | ACTGCCACCGCTCTTGTCAGCACCGGCTACGGCCTTCTCCCCAGCTaGCCGCTGCCGGCGTCCGAGTGGGGGCGGCTGGAGCTTAAACTT | + |
|
Preference number: 5 (lower is better) Translates to: TATALVSTGYGLLPS*PLPASEWGRLELKL Trigger: AAGTTTAAGCTCCAGCCGCCCCCACTCGGACGCCGGCAGCGGGCAGCTGGGGAGAAGGCCGTAGCCGGTGCTGACAAGAGCGGTGGCAGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
||
| CDS-3UTR CAA 90 bp | CCCCCTCCCTCCCCCTACCACCACTTTGCCCAGAGCTTAGAAACCCACAGAGACGGCGGCAGCGGGCACTaGTCAGGGCGCTGGGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PPPSPYHHFAQSLETHRDGGSGH*SGRWGW Trigger: CCAGCCCCAGCGCCCTGACAAGTGCCCGCTGCCGCC...GTCTCTGTGGGTTTCTAAGCTCTGGGCAAAGTGGTGGTAGGGGGAGGGAGGGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
||
| CDS TCA 90 bp | GCTGGGGCACCACCAGCCCAGGGTAGTGCAGGAAGGCGCGGGGGCTaGGGTGGTAGTTGTAGACGCTTTGGGTGTGGGCCTGCAGGTACC | + |
|
Preference number: 5 (lower is better) Translates to: AGAPPAQGSAGRRGG*GGSCRRFGCGPAGT Trigger: GGTACCTGCAGGCCCACACCCAAAGCGTCTACAACTACCACCTCAGCCCCCGCGCCTTCCTGCACTACCCTGGGCTGGTGGTGCCCCAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
||
| CDS-3UTR CAA 90 bp | CCCTCCCTCCCCCTACCACCACTTTGCCCAGAGCTTAGAAACCCACAGAGACAGGGCGGCAGCGGGCACTaGTCAGGGCGCTGGGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PSLPLPPLCPELRNPQRQGGSGH*SGRWGW Trigger: CCAGCCCCAGCGCCCTGACAAGTGCCCGCTGCCGCC...CTGTCTCTGTGGGTTTCTAAGCTCTGGGCAAAGTGGTGGTAGGGGGAGGGAGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS TCA 90 bp | CTCCCAGCGGTTCCTCCAGCTCTGACGTGCCATCACTACAGTCACTaGCTGAGCCTCGGCCCAGGCGGCGGGCCACCACAGCCGAGAAGA | + |
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Preference number: 5 (lower is better) Translates to: LPAVPPALTCHHYSH*LSLGPGGGPPQPRR Trigger: TCTTCTCGGCTGTGGTGGCCCGCCGCCTGGGCCGAGGCTCAGTCAGTGACTGTAGTGATGGCACGTCAGAGCTGGAGGAACCGCTGGGAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS-3UTR CAA 90 bp | GGGAAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGCAGGCACTGCCACCGCTCTaGTCAGCACCGGCTACGGCC | + |
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Preference number: 5 (lower is better) Translates to: GKRQESCPHLQGIGGLRQALPPL*SAPATA Trigger: GGCCGTAGCCGGTGCTGACAAGAGCGGTGGCAGTGC...CTGCCTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTTCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS-3UTR CAA 90 bp | GCAGGGAAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGGCACTGCCACCGCTCTaGTCAGCACCGGCTACGGCC | + |
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Preference number: 5 (lower is better) Translates to: AGKRQESCPHLQGIGGLRALPPL*SAPATA Trigger: GGCCGTAGCCGGTGCTGACAAGAGCGGTGGCAGTGC...CCTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTTCCCTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS CCA 90 bp | AAGATGAAGATGAAGAGCAGGCTGGTGGTGAGCGGGGGTCCTCGGTaGGGGACAGCACCTCGGAGGGCGTTGAGGGAGGGAAGCGGAAGT | + |
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Preference number: 5 (lower is better) Translates to: KMKMKSRLVVSGGPR*GTAPRRALREGSGS Trigger: ACTTCCGCTTCCCTCCCTCAACGCCCTCCGAGGTGCTGTCCCCCACCGAGGACCCCCGCTCACCACCAGCCTGCTCTTCATCTTCATCTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000222329.9 ENST00000440177.6 ENST00000593944.5 ENST00000595448.1 |
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| CDS-3UTR CAA 90 bp | GGGAAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGCAGGAGATGGGCTCCACCTaGATCTGTGGTGGCGGGGGC | + |
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Preference number: 5 (lower is better) Translates to: GKRQESCPHLQGIGGLRQEMGST*ICGGGG Trigger: GCCCCCGCCACCACAGATCAAGGTGGAGCCCATCTC...CTGCCTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTTCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS-3UTR CAA 90 bp | GAAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGCAGCAGCACCTCGGAGGGCGTaGAGGGAGGGAAGCGGAAGT | + |
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Preference number: 5 (lower is better) Translates to: EETRELPSPPGHRGLKAAAPRRA*REGSGS Trigger: ACTTCCGCTTCCCTCCCTCAACGCCCTCCGAGGTGC...TGCTGCCTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS-3UTR CAA 90 bp | AAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGCAGCAAGAGATGGGCTCCACCTaGATCTGTGGTGGCGGGGGC | + |
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Preference number: 5 (lower is better) Translates to: KRQESCPHLQGIGGLRQQEMGST*ICGGGG Trigger: GCCCCCGCCACCACAGATCAAGGTGGAGCCCATCTC...TTGCTGCCTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS-3UTR CAA 90 bp | GCAGGGAAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGTCCCCACGCACCTTCTaGTCCTCACCCTCATCCTCA | + |
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Preference number: 5 (lower is better) Translates to: AGKRQESCPHLQGIGGLRSPRTF*SSPSSS Trigger: TGAGGATGAGGGTGAGGACAAGAAGGTGCGTGGGGA...CCTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTTCCCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS-3UTR CAA 90 bp | CCCTCCCTCCCCCTACCACCACTTTGCCCAGAGCTTAGAAACCCACAGAGACAGGGCACTTGTAGAGATTaGTGGCCCATGGGCGGCACC | + |
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Preference number: 5 (lower is better) Translates to: PSLPLPPLCPELRNPQRQGTCRD*WPMGGT Trigger: GGTGCCGCCCATGGGCCACAAATCTCTACAAGTGCC...CTGTCTCTGTGGGTTTCTAAGCTCTGGGCAAAGTGGTGGTAGGGGGAGGGAGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000222329.9 |
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| CDS CCA 90 bp | CTCAGGGAAGGGCTGGGAGTGGCCCAAGGTCACACAGCTAGGATTTaGCAAAGCCAGGGGTCAGACCCAATGCTTGTTCCCACAGGCAAG | + |
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Preference number: 5 (lower is better) Translates to: LREGLGVAQGHTARI*QSQGSDPMLVPTGK Trigger: CTTGCCTGTGGGAACAAGCATTGGGTCTGACCCCTGGCTTTGCCAAATCCTAGCTGTGTGACCTTGGGCCACTCCCAGCCCTTCCCTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000596818.1 |
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| CDS-3UTR CAA 90 bp | GGCAGGGAAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGTGAACCGTTTCCCCTaGGTCTTGTGCAGAATGCGC | + |
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Preference number: 5 (lower is better) Translates to: GREETRELPSPPGHRGLKVNRFP*VLCRMR Trigger: GCGCATTCTGCACAAGACCAAGGGGAAACGGTTCAC...CTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTTCCCTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS-3UTR CAA 90 bp | GCAGGGAAGAGACAAGAGAGCTGCCCTCACCTCCAGGGCATAGGGGGCTTAAGGGTAGTTGTAGACGCTTaGGGTGTGGGCCTGCAGGTA | + |
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Preference number: 5 (lower is better) Translates to: AGKRQESCPHLQGIGGLRVVVDA*GVGLQV Trigger: TACCTGCAGGCCCACACCCAAAGCGTCTACAACTAC...CCTTAAGCCCCCTATGCCCTGGAGGTGAGGGCAGCTCTCTTGTCTCTTCCCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS-3UTR CAA 90 bp | CCCCCTCCCTCCCCCTACCACCACTTTGCCCAGAGCTTAGAAACCCACAGAGACGTAGTTGTAGACGCTTaGGGTGTGGGCCTGCAGGTA | + |
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Preference number: 5 (lower is better) Translates to: PPPSPYHHFAQSLETHRDVVVDA*GVGLQV Trigger: TACCTGCAGGCCCACACCCAAAGCGTCTACAACTAC...GTCTCTGTGGGTTTCTAAGCTCTGGGCAAAGTGGTGGTAGGGGGAGGGAGGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS-3UTR CAA 90 bp | CCCCCTCCCTCCCCCTACCACCACTTTGCCCAGAGCTTAGAAACCCACAGAGACCGCTTAAAGCGTAGCTaGAGGGGCATGCACTGGGAT | + |
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Preference number: 5 (lower is better) Translates to: PPPSPYHHFAQSLETHRDRLKRS*RGMHWD Trigger: ATCCCAGTGCATGCCCCTCAAGCTACGCTTTAAGCG...GTCTCTGTGGGTTTCTAAGCTCTGGGCAAAGTGGTGGTAGGGGGAGGGAGGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS-3UTR CAA 90 bp | CCCTCCCTCCCCCTACCACCACTTTGCCCAGAGCTTAGAAACCCACAGAGACAGTCCCCACGCACCTTCTaGTCCTCACCCTCATCCTCA | + |
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Preference number: 5 (lower is better) Translates to: PSLPLPPLCPELRNPQRQSPRTF*SSPSSS Trigger: TGAGGATGAGGGTGAGGACAAGAAGGTGCGTGGGGA...CTGTCTCTGTGGGTTTCTAAGCTCTGGGCAAAGTGGTGGTAGGGGGAGGGAGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS-3UTR CAA 90 bp | CCCTCCCTCCCCCTACCACCACTTTGCCCAGAGCTTAGAAACCCACAGAGACAGGTGAACCGTTTCCCCTaGGTCTTGTGCAGAATGCGC | + |
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Preference number: 5 (lower is better) Translates to: PSLPLPPLCPELRNPQRQVNRFP*VLCRMR Trigger: GCGCATTCTGCACAAGACCAAGGGGAAACGGTTCAC...CTGTCTCTGTGGGTTTCTAAGCTCTGGGCAAAGTGGTGGTAGGGGGAGGGAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS-3UTR CAA 90 bp | CCCTCCCTCCCCCTACCACCACTTTGCCCAGAGCTTAGAAACCCACAGAGACAGCGCTTAAAGCGTAGCTaGAGGGGCATGCACTGGGAT | + |
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Preference number: 5 (lower is better) Translates to: PSLPLPPLCPELRNPQRQRLKRS*RGMHWD Trigger: ATCCCAGTGCATGCCCCTCAAGCTACGCTTTAAGCG...CTGTCTCTGTGGGTTTCTAAGCTCTGGGCAAAGTGGTGGTAGGGGGAGGGAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS-3UTR CAA 90 bp | CCCCCTCCCTCCCCCTACCACCACTTTGCCCAGAGCTTAGAAACCCACAGAGACCGTTTCCCCTTGGTCTaGTGCAGAATGCGCTTGTTA | + |
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Preference number: 5 (lower is better) Translates to: PPPSPYHHFAQSLETHRDRFPLV*CRMRLL Trigger: TAACAAGCGCATTCTGCACAAGACCAAGGGGAAACG...GTCTCTGTGGGTTTCTAAGCTCTGGGCAAAGTGGTGGTAGGGGGAGGGAGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS-3UTR CAA 90 bp | AGAACAGGGAGGGAGACAAGGCTTTACTTCCTAAGCGATTGTAATAGAAAAGTTGAGGGGGCTTCCAGTTaGGTTTCAGGGCACCCCCTT | + |
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Preference number: 5 (lower is better) Translates to: RTGRETRLYFLSDCNRKVEGASS*VSGHPL Trigger: AAGGGGGTGCCCTGAAACCAAACTGGAAGCCCCCTC...AACTTTTCTATTACAATCGCTTAGGAAGTAAAGCCTTGTCTCCCTCCCTGTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000222329.9 |
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| CDS-3UTR CAA 90 bp | AGAACAGGGAGGGAGACAAGGCTTTACTTCCTAAGCGATTGTAATAGAAAAGTTCGTTTCCCCTTGGTCTaGTGCAGAATGCGCTTGTTA | + |
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Preference number: 5 (lower is better) Translates to: RTGRETRLYFLSDCNRKVRFPLV*CRMRLL Trigger: TAACAAGCGCATTCTGCACAAGACCAAGGGGAAACG...AACTTTTCTATTACAATCGCTTAGGAAGTAAAGCCTTGTCTCCCTCCCTGTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000222329.9 |
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| CDS CCA 72 bp | GGGCCCTCGGAAGGCACCCAGATCCGGAGGGCCGGGTaGTCGGGCGCGGGGATCCTCTCCCAGCGGTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: GPSEGTQIRRAG*SGAGILSQRFL Trigger: GAGGAACCGCTGGGAGAGGATCCCCGCGCCCGACCACCCGGCCCTCCGGATCTGGGTGCCTTCCGAGGGCCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS GCA 72 bp | GCTCTTGTCAGCACCGGCTACGGCCTTCTCCCCAGCTaGCCGCTGCCGGCGTCCGAGTGGGGGCGGCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: ALVSTGYGLLPS*PLPASEWGRLE Trigger: CTCCAGCCGCCCCCACTCGGACGCCGGCAGCGGGCAGCTGGGGAGAAGGCCGTAGCCGGTGCTGACAAGAGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS CAA 72 bp | GCCCCCTCAGCCAGCCCGCCTGCACTGCCACCGCTCTaGTCAGCACCGGCTACGGCCTTCTCCCCAGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: APSASPPALPPL*SAPATAFSPAA Trigger: GGCAGCTGGGGAGAAGGCCGTAGCCGGTGCTGACAAGAGCGGTGGCAGTGCAGGCGGGCTGGCTGAGGGGGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS CAA 90 bp | GTGGTGAGCGGGGGTCCTCGGTGGGGGACAGCACCTCGGAGGGCGTaGAGGGAGGGAAGCGGAAGTGGCTACCACCCGACGGCACTGGCG | + |
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Preference number: 6 (lower is better) Translates to: VVSGGPRWGTAPRRA*REGSGSGYHPTALA Trigger: CGCCAGTGCCGTCGGGTGGTAGCCACTTCCGCTTCCCTCCCTCAACGCCCTCCGAGGTGCTGTCCCCCACCGAGGACCCCCGCTCACCAC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENST00000222329.9 ENST00000440177.6 ENST00000593944.5 ENST00000595448.1 |
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| CDS CCA 72 bp | AGCACCTCGGAGGGCGTTGAGGGAGGGAAGCGGAAGTaGCTACCACCCGACGGCACTGGCGGGGCACTCTGG | + |
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Preference number: 6 (lower is better) Translates to: STSEGVEGGKRK*LPPDGTGGALW Trigger: CCAGAGTGCCCCGCCAGTGCCGTCGGGTGGTAGCCACTTCCGCTTCCCTCCCTCAACGCCCTCCGAGGTGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000222329.9 ENST00000440177.6 ENST00000593944.5 ENST00000595448.1 |
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| CDS GCA 72 bp | GAGTCTCGGTGCTCCAGGGAGAGCTGGGCCGTGGCATaGTGGAGGTCAGAGCTCACCCGCCTTGGGGTGAGG | + |
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Preference number: 6 (lower is better) Translates to: ESRCSRESWAVA*WRSELTRLGVR Trigger: CCTCACCCCAAGGCGGGTGAGCTCTGACCTCCAGCATGCCACGGCCCAGCTCTCCCTGGAGCACCGAGACTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS CCA 72 bp | CTCAGGAGTCTCGGTGCTCCAGGGAGAGCTGGGCCGTaGCATGCTGGAGGTCAGAGCTCACCCGCCTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: LRSLGAPGRAGP*HAGGQSSPALG Trigger: CCCCAAGGCGGGTGAGCTCTGACCTCCAGCATGCCACGGCCCAGCTCTCCCTGGAGCACCGAGACTCCTGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS CCA 72 bp | CACAGCCCTCAGGAGTCTCGGTGCTCCAGGGAGAGCTaGGCCGTGGCATGCTGGAGGTCAGAGCTCACCCGC | + |
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Preference number: 6 (lower is better) Translates to: HSPQESRCSRES*AVACWRSELTR Trigger: GCGGGTGAGCTCTGACCTCCAGCATGCCACGGCCCAGCTCTCCCTGGAGCACCGAGACTCCTGAGGGCTGTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS CCA 72 bp | ATCCGGGAAGGCAAACCCTTGGGTAGAGGTTGGCGGTaGGCTGGCTGGTCTCTGGAGGGGGTGGGCAGCCCG | + |
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Preference number: 6 (lower is better) Translates to: IREGKPLGRGWR*AGWSLEGVGSP Trigger: CGGGCTGCCCACCCCCTCCAGAGACCAGCCAGCCCACCGCCAACCTCTACCCAAGGGTTTGCCTTCCCGGAT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000595941.1 |
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| CDS TCA 72 bp | GTTCCTCCAGCTCTGACGTGCCATCACTACAGTCACTaGCTGAGCCTCGGCCCAGGCGGCGGGCCACCACAG | + |
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Preference number: 6 (lower is better) Translates to: VPPALTCHHYSH*LSLGPGGGPPQ Trigger: CTGTGGTGGCCCGCCGCCTGGGCCGAGGCTCAGTCAGTGACTGTAGTGATGGCACGTCAGAGCTGGAGGAAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS TCA 72 bp | CCACCAGCCCAGGGTAGTGCAGGAAGGCGCGGGGGCTaGGGTGGTAGTTGTAGACGCTTTGGGTGTGGGCCT | + |
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Preference number: 6 (lower is better) Translates to: PPAQGSAGRRGG*GGSCRRFGCGP Trigger: AGGCCCACACCCAAAGCGTCTACAACTACCACCTCAGCCCCCGCGCCTTCCTGCACTACCCTGGGCTGGTGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS CAA 72 bp | GAAGGCGCGGGGGCTGAGGTGGTAGTTGTAGACGCTTaGGGTGTGGGCCTGCAGGTACCGTTTCATGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: EGAGAEVVVVDA*GVGLQVPFHVL Trigger: GAGGACATGAAACGGTACCTGCAGGCCCACACCCAAAGCGTCTACAACTACCACCTCAGCCCCCGCGCCTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS CAA 90 bp | GTAGTGCAGGAAGGCGCGGGGGCTGAGGTGGTAGTTGTAGACGCTTaGGGTGTGGGCCTGCAGGTACCGTTTCATGTCCTCAGGGCTGAA | + |
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Preference number: 6 (lower is better) Translates to: VVQEGAGAEVVVVDA*GVGLQVPFHVLRAE Trigger: TTCAGCCCTGAGGACATGAAACGGTACCTGCAGGCCCACACCCAAAGCGTCTACAACTACCACCTCAGCCCCCGCGCCTTCCTGCACTAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000222329.9 ENST00000440177.6 |
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| CDS GCA 72 bp | CAACTGAGGAACGTAGGCCACAAAAGACAAATCAAGTaGCCAGAGGGTGGGTACCAGCTCTCTCCTCACATC | + |
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Preference number: 6 (lower is better) Translates to: QLRNVGHKRQIK*PEGGYQLSPHI Trigger: GATGTGAGGAGAGAGCTGGTACCCACCCTCTGGGCACTTGATTTGTCTTTTGTGGCCTACGTTCCTCAGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000595448.1 |
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| CDS CCA 72 bp | GGGCACTGCACCCCCAGCCAACCCCACATCAATGAATaGGTAATTGACCAGCACCAGTTTGTTGAAATTGAA | + |
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Preference number: 6 (lower is better) Translates to: GHCTPSQPHINE*VIDQHQFVEIE Trigger: TTCAATTTCAACAAACTGGTGCTGGTCAATTACCCATTCATTGATGTGGGGTTGGCTGGGGGTGCAGTGCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000222329.9 ENST00000440177.6 ENST00000593944.5 ENST00000595448.1 |
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