RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EREG (Homo sapiens)

Ensembl gene IDs: ENSG00000124882

Ensembl transcript IDs: ENST00000244869.3, ENST00000503689.1, ENST00000507603.1

Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GACAGTCGTGTGATTGCACCAGGGTATATAATGCATGGATACACATaGAGACAAGTCCTGGCACCTGGTGCTCCAGAGGTCAGCCATGGC +
Preference number: 1 (lower is better)
Translates to: DSRVIAPGYIMHGYT*RQVLAPGAPEVSHG
Trigger: GCCATGGCTGACCTCTGGAGCACCAGGTGCCAGGACTTGTCTCCATGTGTATCCATGCATTATATACCCTGGTGCAATCACACGACTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244869.3
3UTR CCA 90 bp CACATGGAGACAAGTCCTGGCACCTGGTGCTCCAGAGGTCAGCCATaGCTTATTATGCCTTCGTTTACCCTAGCACATGCCAGGATAAAC +
Preference number: 1 (lower is better)
Translates to: HMETSPGTWCSRGQP*LIMPSFTLAHARIN
Trigger: GTTTATCCTGGCATGTGCTAGGGTAAACGAAGGCATAATAAGCCATGGCTGACCTCTGGAGCACCAGGTGCCAGGACTTGTCTCCATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244869.3
3UTR GCA 90 bp GTATATAATGCATGGATACACATGGAGACAAGTCCTGGCACCTGGTaGTCCAGAGGTCAGCCATGGCTTATTATGCCTTCGTTTACCCTA +
Preference number: 1 (lower is better)
Translates to: VYNAWIHMETSPGTW*SRGQPWLIMPSFTL
Trigger: TAGGGTAAACGAAGGCATAATAAGCCATGGCTGACCTCTGGAGCACCAGGTGCCAGGACTTGTCTCCATGTGTATCCATGCATTATATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244869.3
3UTR TCA 90 bp AGTGGCTCCTTATGCAATAGCCCAAAAATACTCCTATTAACTCTCTaGGACCTATGGGCTCAGAGTGCAGAAGAAATCTTTGTCTCTTCC +
Preference number: 1 (lower is better)
Translates to: SGSLCNSPKILLLTL*DLWAQSAEEIFVSS
Trigger: GGAAGAGACAAAGATTTCTTCTGCACTCTGAGCCCATAGGTCTCAGAGAGTTAATAGGAGTATTTTTGGGCTATTGCATAAGGAGCCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244869.3
3UTR TCA 90 bp TCTGTTTATTTTCCTAATAGTAAGGGCCAGGGCCAGGACTTTAGATaGCAGTCGTGTGATTGCACCAGGGTATATAATGCATGGATACAC +
Preference number: 1 (lower is better)
Translates to: SVYFPNSKGQGQDFR*QSCDCTRVYNAWIH
Trigger: GTGTATCCATGCATTATATACCCTGGTGCAATCACACGACTGTCATCTAAAGTCCTGGCCCTGGCCCTTACTATTAGGAAAATAAACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244869.3
3UTR-3UTR TCA 90 bp ACAAGTCCTGGCACCTGGTGCTCCAGAGGTCAGCCATGGCTTATTATGCCTTCGCTCCTATTAACTCTCTaGGACCTATGGGCTCAGAGT +
Preference number: 2 (lower is better)
Translates to: TSPGTWCSRGQPWLIMPSLLLTL*DLWAQS
Trigger: ACTCTGAGCCCATAGGTCTCAGAGAGTTAATAGGAG...CGAAGGCATAATAAGCCATGGCTGACCTCTGGAGCACCAGGTGCCAGGACTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244869.3
3UTR-3UTR CCA 90 bp ACAAGTCCTGGCACCTGGTGCTCCAGAGGTCAGCCATGGCTTATTATGCCTTCGCATAAAATCCAAAAGTaGTGGCAGCAGTGGCTCCTT +
Preference number: 2 (lower is better)
Translates to: TSPGTWCSRGQPWLIMPSHKIQK*WQQWLL
Trigger: AAGGAGCCACTGCTGCCACCACTTTTGGATTTTATG...CGAAGGCATAATAAGCCATGGCTGACCTCTGGAGCACCAGGTGCCAGGACTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000244869.3
3UTR-3UTR TCA 90 bp GGAGACAAGTCCTGGCACCTGGTGCTCCAGAGGTCAGCCATGGCTTATTATGCCACAATTCTTGAGCTATaGCCTGGGAATTGCTTACTT +
Preference number: 2 (lower is better)
Translates to: GDKSWHLVLQRSAMAYYATILEL*PGNCLL
Trigger: AAGTAAGCAATTCCCAGGTCATAGCTCAAGAATTGT...GGCATAATAAGCCATGGCTGACCTCTGGAGCACCAGGTGCCAGGACTTGTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244869.3
3UTR-3UTR GCA 90 bp ATACACCAGAAATACTGTTTGTACAAGTCATTACTCCCCCTTCTCCCATATGAAAGTCCTGGCACCTGGTaGTCCAGAGGTCAGCCATGG +
Preference number: 2 (lower is better)
Translates to: IHQKYCLYKSLLPLLPYESPGTW*SRGQPW
Trigger: CCATGGCTGACCTCTGGAGCACCAGGTGCCAGGACT...TTCATATGGGAGAAGGGGGAGTAATGACTTGTACAAACAGTATTTCTGGTGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244869.3
3UTR-3UTR TCA 90 bp ATACACCAGAAATACTGTTTGTACAAGTCATTACTCCCCCTTCTCCCATATGAAGGCCAGGACTTTAGATaGCAGTCGTGTGATTGCACC +
Preference number: 2 (lower is better)
Translates to: IHQKYCLYKSLLPLLPYEGQDFR*QSCDCT
Trigger: GGTGCAATCACACGACTGTCATCTAAAGTCCTGGCC...TTCATATGGGAGAAGGGGGAGTAATGACTTGTACAAACAGTATTTCTGGTGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244869.3
3UTR-3UTR GCA 90 bp AACCGTTTACCAAAATGGCTCTTCAAACTTAAAAAGTGCAATTACAGAGTGCAACCGAGATCGTGCCACTaGACTCCAACCTGGGCAACA +
Preference number: 2 (lower is better)
Translates to: NRLPKWLFKLKKCNYRVQPRSCH*TPTWAT
Trigger: TGTTGCCCAGGTTGGAGTGCAGTGGCACGATCTCGG...TTGCACTCTGTAATTGCACTTTTTAAGTTTGAAGAGCCATTTTGGTAAACGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244869.3
3UTR-3UTR CCA 90 bp ATACACCAGAAATACTGTTTGTACAAGTCATTACTCCCCCTTCTCCCATATGAAAGATCCTCCCTGACCTaGTATGTGATCCAGGGAGAC +
Preference number: 2 (lower is better)
Translates to: IHQKYCLYKSLLPLLPYERSSLT*YVIQGD
Trigger: GTCTCCCTGGATCACATACCAGGTCAGGGAGGATCT...TTCATATGGGAGAAGGGGGAGTAATGACTTGTACAAACAGTATTTCTGGTGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244869.3
3UTR-3UTR CCA 90 bp AACCGTTTACCAAAATGGCTCTTCAAACTTAAAAAGTGCAATTACAGAGTGCAAACAAGTCCTGGCACCTaGTGCTCCAGAGGTCAGCCA +
Preference number: 2 (lower is better)
Translates to: NRLPKWLFKLKKCNYRVQTSPGT*CSRGQP
Trigger: TGGCTGACCTCTGGAGCACCAGGTGCCAGGACTTGT...TTGCACTCTGTAATTGCACTTTTTAAGTTTGAAGAGCCATTTTGGTAAACGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244869.3
3UTR-3UTR CCA 90 bp AACCGTTTACCAAAATGGCTCTTCAAACTTAAAAAGTGCAATTACAGAGTGCAACATGGAGACAAGTCCTaGCACCTGGTGCTCCAGAGG +
Preference number: 2 (lower is better)
Translates to: NRLPKWLFKLKKCNYRVQHGDKS*HLVLQR
Trigger: CCTCTGGAGCACCAGGTGCCAGGACTTGTCTCCATG...TTGCACTCTGTAATTGCACTTTTTAAGTTTGAAGAGCCATTTTGGTAAACGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244869.3
3UTR-3UTR TCA 90 bp ATACACCAGAAATACTGTTTGTACAAGTCATTACTCCCCCTTCTCCCATATGAAGCAGAATCTGGTAGATaGGTGACTAGTACCTGTAGG +
Preference number: 2 (lower is better)
Translates to: IHQKYCLYKSLLPLLPYEAESGR*VTSTCR
Trigger: CCTACAGGTACTAGTCACTCATCTACCAGATTCTGC...TTCATATGGGAGAAGGGGGAGTAATGACTTGTACAAACAGTATTTCTGGTGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244869.3
3UTR-3UTR CCA 90 bp ATACACCAGAAATACTGTTTGTACAAGTCATTACTCCCCCTTCTCCCATATGAAATGCATGGATACACATaGAGACAAGTCCTGGCACCT +
Preference number: 2 (lower is better)
Translates to: IHQKYCLYKSLLPLLPYEMHGYT*RQVLAP
Trigger: AGGTGCCAGGACTTGTCTCCATGTGTATCCATGCAT...TTCATATGGGAGAAGGGGGAGTAATGACTTGTACAAACAGTATTTCTGGTGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244869.3
3UTR-3UTR CCA 90 bp AACCGTTTACCAAAATGGCTCTTCAAACTTAAAAAGTGCAATTACAGAGTGCAAGGAGGCTGTGGAGGGTaGATCTCAAGGTTAGGAGAT +
Preference number: 2 (lower is better)
Translates to: NRLPKWLFKLKKCNYRVQGGCGG*ISRLGD
Trigger: ATCTCCTAACCTTGAGATCCACCCTCCACAGCCTCC...TTGCACTCTGTAATTGCACTTTTTAAGTTTGAAGAGCCATTTTGGTAAACGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244869.3
3UTR-3UTR GCA 90 bp ATACACCAGAAATACTGTTTGTACAAGTCATTACTCCCCCTTCTCCCATATGAAGTTTACCCTAGCACATaGCAGGATAAACGTAGAGGA +
Preference number: 2 (lower is better)
Translates to: IHQKYCLYKSLLPLLPYEVYPST*QDKRRG
Trigger: TCCTCTACGTTTATCCTGGCATGTGCTAGGGTAAAC...TTCATATGGGAGAAGGGGGAGTAATGACTTGTACAAACAGTATTTCTGGTGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244869.3
3UTR-3UTR CCA 90 bp ATACACCAGAAATACTGTTTGTACAAGTCATTACTCCCCCTTCTCCCATATGAATCCAGAGGTCAGCCATaGCTTATTATGCCTTCGTTT +
Preference number: 2 (lower is better)
Translates to: IHQKYCLYKSLLPLLPYESRGQP*LIMPSF
Trigger: AAACGAAGGCATAATAAGCCATGGCTGACCTCTGGA...TTCATATGGGAGAAGGGGGAGTAATGACTTGTACAAACAGTATTTCTGGTGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244869.3
3UTR-3UTR GCA 90 bp ATACACCAGAAATACTGTTTGTACAAGTCATTACTCCCCCTTCTCCCATATGAAAGCAGTGGCTCCTTATaGAATAGCCCAAAAATACTC +
Preference number: 2 (lower is better)
Translates to: IHQKYCLYKSLLPLLPYESSGSL*NSPKIL
Trigger: GAGTATTTTTGGGCTATTGCATAAGGAGCCACTGCT...TTCATATGGGAGAAGGGGGAGTAATGACTTGTACAAACAGTATTTCTGGTGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000244869.3
3UTR-3UTR TCA 90 bp ATACACCAGAAATACTGTTTGTACAAGTCATTACTCCCCCTTCTCCCATATGAATGGTTCTCAATACATTaGATATGCATAGCCCCTTCT +
Preference number: 2 (lower is better)
Translates to: IHQKYCLYKSLLPLLPYEWFSIH*ICIAPS
Trigger: AGAAGGGGCTATGCATATTCAATGTATTGAGAACCA...TTCATATGGGAGAAGGGGGAGTAATGACTTGTACAAACAGTATTTCTGGTGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244869.3
3UTR-3UTR CCA 90 bp ATACACCAGAAATACTGTTTGTACAAGTCATTACTCCCCCTTCTCCCATATGAAAACTGGGTTATTATGTaGCCTTGGTTGAAGACCATA +
Preference number: 2 (lower is better)
Translates to: IHQKYCLYKSLLPLLPYENWVIM*PWLKTI
Trigger: TATGGTCTTCAACCAAGGCCACATAATAACCCAGTT...TTCATATGGGAGAAGGGGGAGTAATGACTTGTACAAACAGTATTTCTGGTGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244869.3
3UTR-3UTR TCA 90 bp AACCGTTTACCAAAATGGCTCTTCAAACTTAAAAAGTGCAATTACAGAGTGCAATTTGATACCTGGTGGTaGTTGAATTTAGTCTCAAAG +
Preference number: 2 (lower is better)
Translates to: NRLPKWLFKLKKCNYRVQFDTWW*LNLVSK
Trigger: CTTTGAGACTAAATTCAATCACCACCAGGTATCAAA...TTGCACTCTGTAATTGCACTTTTTAAGTTTGAAGAGCCATTTTGGTAAACGGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244869.3
3UTR-3UTR GCA 90 bp AACCGTTTACCAAAATGGCTCTTCAAACTTAAAAAGTGCAATTACAGAGTGCAACACAGGACCTATATTTaGTTCTCCCAAATTCTAATT +
Preference number: 2 (lower is better)
Translates to: NRLPKWLFKLKKCNYRVQHRTYI*FSQILI
Trigger: AATTAGAATTTGGGAGAAGCAAATATAGGTCCTGTG...TTGCACTCTGTAATTGCACTTTTTAAGTTTGAAGAGCCATTTTGGTAAACGGTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244869.3
3UTR GCA 72 bp GCATGGATACACATGGAGACAAGTCCTGGCACCTGGTaGTCCAGAGGTCAGCCATGGCTTATTATGCCTTCG +
Preference number: 3 (lower is better)
Translates to: AWIHMETSPGTW*SRGQPWLIMPS
Trigger: CGAAGGCATAATAAGCCATGGCTGACCTCTGGAGCACCAGGTGCCAGGACTTGTCTCCATGTGTATCCATGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244869.3
3UTR CCA 72 bp ACAAGTCCTGGCACCTGGTGCTCCAGAGGTCAGCCATaGCTTATTATGCCTTCGTTTACCCTAGCACATGCC +
Preference number: 3 (lower is better)
Translates to: TSPGTWCSRGQP*LIMPSFTLAHA
Trigger: GGCATGTGCTAGGGTAAACGAAGGCATAATAAGCCATGGCTGACCTCTGGAGCACCAGGTGCCAGGACTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244869.3
3UTR CCA 72 bp AATGCATGGATACACATGGAGACAAGTCCTGGCACCTaGTGCTCCAGAGGTCAGCCATGGCTTATTATGCCT +
Preference number: 3 (lower is better)
Translates to: NAWIHMETSPGT*CSRGQPWLIMP
Trigger: AGGCATAATAAGCCATGGCTGACCTCTGGAGCACCAGGTGCCAGGACTTGTCTCCATGTGTATCCATGCATT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244869.3
3UTR GCA 72 bp GCCATGGCTTATTATGCCTTCGTTTACCCTAGCACATaGCAGGATAAACGTAGAGGAAGAACAGATCCTCCC +
Preference number: 3 (lower is better)
Translates to: AMAYYAFVYPST*QDKRRGRTDPP
Trigger: GGGAGGATCTGTTCTTCCTCTACGTTTATCCTGGCATGTGCTAGGGTAAACGAAGGCATAATAAGCCATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244869.3
3UTR-3UTR CAA 90 bp ACAAGTCCTGGCACCTGGTGCTCCAGAGGTCAGCCATGGCTTATTATGCCTTCGACACAGGACCTATATTaGCTTCTCCCAAATTCTAAT +
Preference number: 3 (lower is better)
Translates to: TSPGTWCSRGQPWLIMPSTQDLY*LLPNSN
Trigger: ATTAGAATTTGGGAGAAGCAAATATAGGTCCTGTGT...CGAAGGCATAATAAGCCATGGCTGACCTCTGGAGCACCAGGTGCCAGGACTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244869.3
3UTR TCA 72 bp TTTCCTAATAGTAAGGGCCAGGGCCAGGACTTTAGATaGCAGTCGTGTGATTGCACCAGGGTATATAATGCA +
Preference number: 3 (lower is better)
Translates to: FPNSKGQGQDFR*QSCDCTRVYNA
Trigger: TGCATTATATACCCTGGTGCAATCACACGACTGTCATCTAAAGTCCTGGCCCTGGCCCTTACTATTAGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244869.3
3UTR-3UTR CAA 90 bp ATACACCAGAAATACTGTTTGTACAAGTCATTACTCCCCCTTCTCCCATATGAACTCAAGGTTAGGAGATaGAGACCATCCTGGCCAACA +
Preference number: 3 (lower is better)
Translates to: IHQKYCLYKSLLPLLPYELKVRR*RPSWPT
Trigger: TGTTGGCCAGGATGGTCTCAATCTCCTAACCTTGAG...TTCATATGGGAGAAGGGGGAGTAATGACTTGTACAAACAGTATTTCTGGTGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244869.3
3UTR TCA 72 bp CAATTCATTTTACATAGGCAGAATCTGGTAGATGAGTaGCTAGTACCTGTAGGAGTCGTGAGTTGGCATAGG +
Preference number: 3 (lower is better)
Translates to: QFILHRQNLVDE*LVPVGVVSWHR
Trigger: CCTATGCCAACTCACGACTCCTACAGGTACTAGTCACTCATCTACCAGATTCTGCCTATGTAAAATGAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244869.3
3UTR-3UTR CAA 90 bp ATACACCAGAAATACTGTTTGTACAAGTCATTACTCCCCCTTCTCCCATATGAAGCTATGACCTGGGAATaGCTTACTTCTAAGCACTGT +
Preference number: 3 (lower is better)
Translates to: IHQKYCLYKSLLPLLPYEAMTWE*LTSKHC
Trigger: ACAGTGCTTAGAAGTAAGCAATTCCCAGGTCATAGC...TTCATATGGGAGAAGGGGGAGTAATGACTTGTACAAACAGTATTTCTGGTGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244869.3
3UTR-3UTR CAA 90 bp ATACACCAGAAATACTGTTTGTACAAGTCATTACTCCCCCTTCTCCCATATGAAATTTTCCGTCCTTGGTaGGTTGAATCCACAGATGTG +
Preference number: 3 (lower is better)
Translates to: IHQKYCLYKSLLPLLPYEIFRPW*VESTDV
Trigger: CACATCTGTGGATTCAACCAACCAAGGACGGAAAAT...TTCATATGGGAGAAGGGGGAGTAATGACTTGTACAAACAGTATTTCTGGTGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244869.3
3UTR-3UTR CAA 90 bp ATACACCAGAAATACTGTTTGTACAAGTCATTACTCCCCCTTCTCCCATATGAAAATTCTCCCATCACTTaGACTTTCGGCAGAGAGATT +
Preference number: 3 (lower is better)
Translates to: IHQKYCLYKSLLPLLPYENSPIT*TFGREI
Trigger: AATCTCTCTGCCGAAAGTCAAAGTGATGGGAGAATT...TTCATATGGGAGAAGGGGGAGTAATGACTTGTACAAACAGTATTTCTGGTGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244869.3
3UTR-3UTR CAA 90 bp AACCGTTTACCAAAATGGCTCTTCAAACTTAAAAAGTGCAATTACAGAGTGCAACTCCCCAGGGTTAGCTaGTTTCAAATGTGTAGTGTT +
Preference number: 3 (lower is better)
Translates to: NRLPKWLFKLKKCNYRVQLPRVS*FQMCSV
Trigger: AACACTACACATTTGAAACAAGCTAACCCTGGGGAG...TTGCACTCTGTAATTGCACTTTTTAAGTTTGAAGAGCCATTTTGGTAAACGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000244869.3
3UTR TCA 72 bp TTATGCAATAGCCCAAAAATACTCCTATTAACTCTCTaGGACCTATGGGCTCAGAGTGCAGAAGAAATCTTT +
Preference number: 3 (lower is better)
Translates to: LCNSPKILLLTL*DLWAQSAEEIF
Trigger: AAAGATTTCTTCTGCACTCTGAGCCCATAGGTCTCAGAGAGTTAATAGGAGTATTTTTGGGCTATTGCATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244869.3
3UTR-3UTR CAA 90 bp ATACACCAGAAATACTGTTTGTACAAGTCATTACTCCCCCTTCTCCCATATGAAGGTTATTATGTGGCCTaGGTTGAAGACCATAAATTA +
Preference number: 3 (lower is better)
Translates to: IHQKYCLYKSLLPLLPYEGYYVA*VEDHKL
Trigger: TAATTTATGGTCTTCAACCAAGGCCACATAATAACC...TTCATATGGGAGAAGGGGGAGTAATGACTTGTACAAACAGTATTTCTGGTGTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244869.3
CDS-3UTR CCA 90 bp ACAAGTCCTGGCACCTGGTGCTCCAGAGGTCAGCCATGGCTTATTATGCCTTCGGCTCGCGGCAGTGGCTaGAGAGCGGCTGTCAGCCTA +
Preference number: 4 (lower is better)
Translates to: TSPGTWCSRGQPWLIMPSARGSG*RAAVSL
Trigger: TAGGCTGACAGCCGCTCTCCAGCCACTGCCGCGAGC...CGAAGGCATAATAAGCCATGGCTGACCTCTGGAGCACCAGGTGCCAGGACTTGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244869.3
CDS-3UTR GCA 90 bp GGAGACAAGTCCTGGCACCTGGTGCTCCAGAGGTCAGCCATGGCTTATTATGCCAGTCCTGGCACCTGGTaGTCCAGAGGTCAGCCATGG +
Preference number: 4 (lower is better)
Translates to: GDKSWHLVLQRSAMAYYASPGTW*SRGQPW
Trigger: CCATGGCTGACCTCTGGAGCACCAGGTGCCAGGACT...GGCATAATAAGCCATGGCTGACCTCTGGAGCACCAGGTGCCAGGACTTGTCTCC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244869.3
CDS-3UTR CCA 90 bp ACAAGTCCTGGCACCTGGTGCTCCAGAGGTCAGCCATGGCTTATTATGCCTTCGGAAGGGACCCCACGTTaGCTGTGTCCCTCTGACACT +
Preference number: 4 (lower is better)
Translates to: TSPGTWCSRGQPWLIMPSEGTPR*LCPSDT
Trigger: AGTGTCAGAGGGACACAGCCAACGTGGGGTCCCTTC...CGAAGGCATAATAAGCCATGGCTGACCTCTGGAGCACCAGGTGCCAGGACTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244869.3
CDS-3UTR CCA 90 bp ACAAGTCCTGGCACCTGGTGCTCCAGAGGTCAGCCATGGCTTATTATGCCTTCGCATGGAGACAAGTCCTaGCACCTGGTGCTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: TSPGTWCSRGQPWLIMPSHGDKS*HLVLQR
Trigger: CCTCTGGAGCACCAGGTGCCAGGACTTGTCTCCATG...CGAAGGCATAATAAGCCATGGCTGACCTCTGGAGCACCAGGTGCCAGGACTTGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244869.3
CDS-3UTR TCA 90 bp GGAGACAAGTCCTGGCACCTGGTGCTCCAGAGGTCAGCCATGGCTTATTATGCCGGCCAGGACTTTAGATaGCAGTCGTGTGATTGCACC +
Preference number: 4 (lower is better)
Translates to: GDKSWHLVLQRSAMAYYAGQDFR*QSCDCT
Trigger: GGTGCAATCACACGACTGTCATCTAAAGTCCTGGCC...GGCATAATAAGCCATGGCTGACCTCTGGAGCACCAGGTGCCAGGACTTGTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244869.3
CDS-3UTR CCA 90 bp ACAAGTCCTGGCACCTGGTGCTCCAGAGGTCAGCCATGGCTTATTATGCCTTCGACTGCCTGTAGAAGATaGAAACCCAGGCAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: TSPGTWCSRGQPWLIMPSTACRR*KPRQSS
Trigger: GCTGCTCTGCCTGGGTTTCCATCTTCTACAGGCAGT...CGAAGGCATAATAAGCCATGGCTGACCTCTGGAGCACCAGGTGCCAGGACTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244869.3
CDS-3UTR TCA 90 bp GGAGACAAGTCCTGGCACCTGGTGCTCCAGAGGTCAGCCATGGCTTATTATGCCGCTACACTTTGTTATTaGCACTTGAGCCACACGTGG +
Preference number: 4 (lower is better)
Translates to: GDKSWHLVLQRSAMAYYAATLCY*HLSHTW
Trigger: CCACGTGTGGCTCAAGTGTCAATAACAAAGTGTAGC...GGCATAATAAGCCATGGCTGACCTCTGGAGCACCAGGTGCCAGGACTTGTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244869.3
CDS-3UTR CCA 90 bp GGAGACAAGTCCTGGCACCTGGTGCTCCAGAGGTCAGCCATGGCTTATTATGCCCACTTGAGCCACACGTaGATTGTCTTCTGTCTGAAC +
Preference number: 4 (lower is better)
Translates to: GDKSWHLVLQRSAMAYYAHLSHT*IVFCLN
Trigger: GTTCAGACAGAAGACAATCCACGTGTGGCTCAAGTG...GGCATAATAAGCCATGGCTGACCTCTGGAGCACCAGGTGCCAGGACTTGTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244869.3
CDS-3UTR CCA 90 bp ACAAGTCCTGGCACCTGGTGCTCCAGAGGTCAGCCATGGCTTATTATGCCTTCGCTGTGCAGTTATCACTaGACTCTCCTGGGATACATG +
Preference number: 4 (lower is better)
Translates to: TSPGTWCSRGQPWLIMPSLCSYH*TLLGYM
Trigger: CATGTATCCCAGGAGAGTCCAGTGATAACTGCACAG...CGAAGGCATAATAAGCCATGGCTGACCTCTGGAGCACCAGGTGCCAGGACTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244869.3
CDS-3UTR CCA 90 bp ACAAGTCCTGGCACCTGGTGCTCCAGAGGTCAGCCATGGCTTATTATGCCTTCGATGCATGGATACACATaGAGACAAGTCCTGGCACCT +
Preference number: 4 (lower is better)
Translates to: TSPGTWCSRGQPWLIMPSMHGYT*RQVLAP
Trigger: AGGTGCCAGGACTTGTCTCCATGTGTATCCATGCAT...CGAAGGCATAATAAGCCATGGCTGACCTCTGGAGCACCAGGTGCCAGGACTTGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244869.3
CDS-3UTR TCA 90 bp ACAAGTCCTGGCACCTGGTGCTCCAGAGGTCAGCCATGGCTTATTATGCCTTCGGAATCACAGTTGTACTaGGGACTGCCTGTAGAAGAT +
Preference number: 4 (lower is better)
Translates to: TSPGTWCSRGQPWLIMPSESQLY*GLPVED
Trigger: ATCTTCTACAGGCAGTCCTCAGTACAACTGTGATTC...CGAAGGCATAATAAGCCATGGCTGACCTCTGGAGCACCAGGTGCCAGGACTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244869.3
CDS-3UTR GCA 90 bp AACCGTTTACCAAAATGGCTCTTCAAACTTAAAAAGTGCAATTACAGAGTGCAAGGCGGCTGCGGAGAGTaGACGGGCAGGGCGGGAGCA +
Preference number: 4 (lower is better)
Translates to: NRLPKWLFKLKKCNYRVQGGCGE*TGRAGA
Trigger: TGCTCCCGCCCTGCCCGTGCACTCTCCGCAGCCGCC...TTGCACTCTGTAATTGCACTTTTTAAGTTTGAAGAGCCATTTTGGTAAACGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244869.3
CDS-3UTR GCA 90 bp GGAGACAAGTCCTGGCACCTGGTGCTCCAGAGGTCAGCCATGGCTTATTATGCCAAGCCACATATTCTTTaGTTAAAGGTTGGTGGACGG +
Preference number: 4 (lower is better)
Translates to: GDKSWHLVLQRSAMAYYAKPHIL*LKVGGR
Trigger: CCGTCCACCAACCTTTAAGCAAAGAATATGTGGCTT...GGCATAATAAGCCATGGCTGACCTCTGGAGCACCAGGTGCCAGGACTTGTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244869.3
CDS-3UTR CCA 90 bp ATACACCAGAAATACTGTTTGTACAAGTCATTACTCCCCCTTCTCCCATATGAAACGGGCTCGCGGCAGTaGCTGGAGAGCGGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: IHQKYCLYKSLLPLLPYETGSRQ*LESGCQ
Trigger: CTGACAGCCGCTCTCCAGCCACTGCCGCGAGCCCGT...TTCATATGGGAGAAGGGGGAGTAATGACTTGTACAAACAGTATTTCTGGTGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244869.3
CDS-3UTR TCA 90 bp GGAGACAAGTCCTGGCACCTGGTGCTCCAGAGGTCAGCCATGGCTTATTATGCCTGGTTCTCAATACATTaGATATGCATAGCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: GDKSWHLVLQRSAMAYYAWFSIH*ICIAPS
Trigger: AGAAGGGGCTATGCATATTCAATGTATTGAGAACCA...GGCATAATAAGCCATGGCTGACCTCTGGAGCACCAGGTGCCAGGACTTGTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244869.3
CDS-3UTR TCA 90 bp GGAGACAAGTCCTGGCACCTGGTGCTCCAGAGGTCAGCCATGGCTTATTATGCCTTTGATACCTGGTGGTaGTTGAATTTAGTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: GDKSWHLVLQRSAMAYYAFDTWW*LNLVSK
Trigger: CTTTGAGACTAAATTCAATCACCACCAGGTATCAAA...GGCATAATAAGCCATGGCTGACCTCTGGAGCACCAGGTGCCAGGACTTGTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244869.3
CDS-3UTR CCA 90 bp GGAGACAAGTCCTGGCACCTGGTGCTCCAGAGGTCAGCCATGGCTTATTATGCCTTGCTTAAAGGTTGGTaGACGGTTAAAAAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: GDKSWHLVLQRSAMAYYALLKGW*TVKKKC
Trigger: ACACTTCTTTTTAACCGTCCACCAACCTTTAAGCAA...GGCATAATAAGCCATGGCTGACCTCTGGAGCACCAGGTGCCAGGACTTGTCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244869.3
CDS-3UTR CCA 90 bp GGAGACAAGTCCTGGCACCTGGTGCTCCAGAGGTCAGCCATGGCTTATTATGCCTCTTTGCTTAAAGGTTaGTGGACGGTTAAAAAGAAG +
Preference number: 4 (lower is better)
Translates to: GDKSWHLVLQRSAMAYYASLLKG*WTVKKK
Trigger: CTTCTTTTTAACCGTCCACCAACCTTTAAGCAAAGA...GGCATAATAAGCCATGGCTGACCTCTGGAGCACCAGGTGCCAGGACTTGTCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244869.3
CDS-3UTR GCA 90 bp AACCGTTTACCAAAATGGCTCTTCAAACTTAAAAAGTGCAATTACAGAGTGCAAGCAGCGCAGGGACCCTaGCGGCACAGAGCATCTCCA +
Preference number: 4 (lower is better)
Translates to: NRLPKWLFKLKKCNYRVQAAQGP*RHRASP
Trigger: TGGAGATGCTCTGTGCCGGCAGGGTCCCTGCGCTGC...TTGCACTCTGTAATTGCACTTTTTAAGTTTGAAGAGCCATTTTGGTAAACGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244869.3
CDS-3UTR GCA 90 bp GGAGACAAGTCCTGGCACCTGGTGCTCCAGAGGTCAGCCATGGCTTATTATGCCGATTTCTGTACCATCTaGAGAAATAATATGTGGAAC +
Preference number: 4 (lower is better)
Translates to: GDKSWHLVLQRSAMAYYADFCTI*RNNMWN
Trigger: GTTCCACATATTATTTCTGCAGATGGTACAGAAATC...GGCATAATAAGCCATGGCTGACCTCTGGAGCACCAGGTGCCAGGACTTGTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244869.3
CDS-3UTR GCA 90 bp ATACACCAGAAATACTGTTTGTACAAGTCATTACTCCCCCTTCTCCCATATGAAGGCGCCATTCAGACTTaGGGCAACTCTGGATCCCCT +
Preference number: 4 (lower is better)
Translates to: IHQKYCLYKSLLPLLPYEGAIQT*GNSGSP
Trigger: AGGGGATCCAGAGTTGCCGCAAGTCTGAATGGCGCC...TTCATATGGGAGAAGGGGGAGTAATGACTTGTACAAACAGTATTTCTGGTGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244869.3
CDS-3UTR GCA 90 bp ACAAGTCCTGGCACCTGGTGCTCCAGAGGTCAGCCATGGCTTATTATGCCTTCGCACAGGACCTATATTTaGTTCTCCCAAATTCTAATT +
Preference number: 4 (lower is better)
Translates to: TSPGTWCSRGQPWLIMPSHRTYI*FSQILI
Trigger: AATTAGAATTTGGGAGAAGCAAATATAGGTCCTGTG...CGAAGGCATAATAAGCCATGGCTGACCTCTGGAGCACCAGGTGCCAGGACTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244869.3
CDS-3UTR CCA 90 bp ATACACCAGAAATACTGTTTGTACAAGTCATTACTCCCCCTTCTCCCATATGAAACAAGTCCTGGCACCTaGTGCTCCAGAGGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: IHQKYCLYKSLLPLLPYETSPGT*CSRGQP
Trigger: TGGCTGACCTCTGGAGCACCAGGTGCCAGGACTTGT...TTCATATGGGAGAAGGGGGAGTAATGACTTGTACAAACAGTATTTCTGGTGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244869.3
CDS-3UTR TCA 90 bp AACCGTTTACCAAAATGGCTCTTCAAACTTAAAAAGTGCAATTACAGAGTGCAAGAGGTGAGGTTGCAGTaGGCCGAGATCGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: NRLPKWLFKLKKCNYRVQEVRLQ*AEIVPL
Trigger: CAGTGGCACGATCTCGGCTCACTGCAACCTCACCTC...TTGCACTCTGTAATTGCACTTTTTAAGTTTGAAGAGCCATTTTGGTAAACGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244869.3
CDS-3UTR CCA 90 bp ATACACCAGAAATACTGTTTGTACAAGTCATTACTCCCCCTTCTCCCATATGAAGGAGGCTGTGGAGGGTaGATCTCAAGGTTAGGAGAT +
Preference number: 4 (lower is better)
Translates to: IHQKYCLYKSLLPLLPYEGGCGG*ISRLGD
Trigger: ATCTCCTAACCTTGAGATCCACCCTCCACAGCCTCC...TTCATATGGGAGAAGGGGGAGTAATGACTTGTACAAACAGTATTTCTGGTGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244869.3
CDS-3UTR CCA 90 bp ATACACCAGAAATACTGTTTGTACAAGTCATTACTCCCCCTTCTCCCATATGAACAGTTTGGGAGGCTGTaGAGGGTGGATCTCAAGGTT +
Preference number: 4 (lower is better)
Translates to: IHQKYCLYKSLLPLLPYEQFGRL*RVDLKV
Trigger: AACCTTGAGATCCACCCTCCACAGCCTCCCAAACTG...TTCATATGGGAGAAGGGGGAGTAATGACTTGTACAAACAGTATTTCTGGTGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244869.3
CDS-3UTR CCA 90 bp ATACACCAGAAATACTGTTTGTACAAGTCATTACTCCCCCTTCTCCCATATGAACATAAAATCCAAAAGTaGTGGCAGCAGTGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: IHQKYCLYKSLLPLLPYEHKIQK*WQQWLL
Trigger: AAGGAGCCACTGCTGCCACCACTTTTGGATTTTATG...TTCATATGGGAGAAGGGGGAGTAATGACTTGTACAAACAGTATTTCTGGTGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000244869.3
CDS-3UTR TCA 90 bp AACCGTTTACCAAAATGGCTCTTCAAACTTAAAAAGTGCAATTACAGAGTGCAACAACTCTGGATCCCCTaGGGTAACTCTCTCATATTC +
Preference number: 4 (lower is better)
Translates to: NRLPKWLFKLKKCNYRVQQLWIP*GNSLIF
Trigger: GAATATGAGAGAGTTACCTCAGGGGATCCAGAGTTG...TTGCACTCTGTAATTGCACTTTTTAAGTTTGAAGAGCCATTTTGGTAAACGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000244869.3
CDS-3UTR TCA 90 bp AACCGTTTACCAAAATGGCTCTTCAAACTTAAAAAGTGCAATTACAGAGTGCAACTCCTATTAACTCTCTaGGACCTATGGGCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: NRLPKWLFKLKKCNYRVQLLLTL*DLWAQS
Trigger: ACTCTGAGCCCATAGGTCTCAGAGAGTTAATAGGAG...TTGCACTCTGTAATTGCACTTTTTAAGTTTGAAGAGCCATTTTGGTAAACGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244869.3
CDS-3UTR TCA 90 bp ATACACCAGAAATACTGTTTGTACAAGTCATTACTCCCCCTTCTCCCATATGAAACAATTCTTGAGCTATaGCCTGGGAATTGCTTACTT +
Preference number: 4 (lower is better)
Translates to: IHQKYCLYKSLLPLLPYETILEL*PGNCLL
Trigger: AAGTAAGCAATTCCCAGGTCATAGCTCAAGAATTGT...TTCATATGGGAGAAGGGGGAGTAATGACTTGTACAAACAGTATTTCTGGTGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244869.3
CDS-3UTR TCA 90 bp AACCGTTTACCAAAATGGCTCTTCAAACTTAAAAAGTGCAATTACAGAGTGCAATTTGTTATTGACACTTaGGCCACACGTGGATTGTCT +
Preference number: 4 (lower is better)
Translates to: NRLPKWLFKLKKCNYRVQFVIDT*ATRGLS
Trigger: AGACAATCCACGTGTGGCTCAAGTGTCAATAACAAA...TTGCACTCTGTAATTGCACTTTTTAAGTTTGAAGAGCCATTTTGGTAAACGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244869.3
CDS-3UTR GCA 90 bp AACCGTTTACCAAAATGGCTCTTCAAACTTAAAAAGTGCAATTACAGAGTGCAAAACCCACTTCACACCTaGAGTAGTTTTGACTCATGT +
Preference number: 4 (lower is better)
Translates to: NRLPKWLFKLKKCNYRVQNPLHT*SSFDSC
Trigger: ACATGAGTCAAAACTACTGCAGGTGTGAAGTGGGTT...TTGCACTCTGTAATTGCACTTTTTAAGTTTGAAGAGCCATTTTGGTAAACGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000244869.3
CDS-3UTR CCA 90 bp ATACACCAGAAATACTGTTTGTACAAGTCATTACTCCCCCTTCTCCCATATGAAAGGGTATATAATGCATaGATACACATGGAGACAAGT +
Preference number: 4 (lower is better)
Translates to: IHQKYCLYKSLLPLLPYERVYNA*IHMETS
Trigger: ACTTGTCTCCATGTGTATCCATGCATTATATACCCT...TTCATATGGGAGAAGGGGGAGTAATGACTTGTACAAACAGTATTTCTGGTGTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244869.3
CDS-3UTR TCA 90 bp AACCGTTTACCAAAATGGCTCTTCAAACTTAAAAAGTGCAATTACAGAGTGCAAAACAGCCAAGATCACTaGAAATATTCAGACTCTCCT +
Preference number: 4 (lower is better)
Translates to: NRLPKWLFKLKKCNYRVQNSQDH*KYSDSP
Trigger: AGGAGAGTCTGAATATTTTCAGTGATCTTGGCTGTT...TTGCACTCTGTAATTGCACTTTTTAAGTTTGAAGAGCCATTTTGGTAAACGGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000244869.3
CDS-3UTR TCA 90 bp AACCGTTTACCAAAATGGCTCTTCAAACTTAAAAAGTGCAATTACAGAGTGCAAACAGGACACATCAGCTaGGAGCAAATCAGTTTTTAT +
Preference number: 4 (lower is better)
Translates to: NRLPKWLFKLKKCNYRVQTGHIS*EQISFY
Trigger: ATAAAAACTGATTTGCTCTCAGCTGATGTGTCCTGT...TTGCACTCTGTAATTGCACTTTTTAAGTTTGAAGAGCCATTTTGGTAAACGGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000244869.3
CDS GCA 90 bp GTCATCGGCGATGGGAGCGGGCGCTGGGGCTTGGCGGAGGGCGGCTaGGGAGAGTGCACGGGCAGGGCGGGAGCAGACGGGCTCGCGGCA +
Preference number: 5 (lower is better)
Translates to: VIGDGSGRWGLAEGG*GECTGRAGADGLAA
Trigger: TGCCGCGAGCCCGTCTGCTCCCGCCCTGCCCGTGCACTCTCCGCAGCCGCCCTCCGCCAAGCCCCAGCGCCCGCTCCCATCGCCGATGAC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244869.3
ENST00000507603.1
CDS CCA 90 bp TCCTCCTCCCCGCGGTCATCGGCGATGGGAGCGGGCGCTGGGGCTTaGCGGAGGGCGGCTGCGGAGAGTGCACGGGCAGGGCGGGAGCAG +
Preference number: 5 (lower is better)
Translates to: SSSPRSSAMGAGAGA*RRAAAESARAGREQ
Trigger: CTGCTCCCGCCCTGCCCGTGCACTCTCCGCAGCCGCCCTCCGCCAAGCCCCAGCGCCCGCTCCCATCGCCGATGACCGCGGGGAGGAGGA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244869.3
ENST00000507603.1
CDS CCA 90 bp ATCTCCATCCTCCTCCCCGCGGTCATCGGCGATGGGAGCGGGCGCTaGGGCTTGGCGGAGGGCGGCTGCGGAGAGTGCACGGGCAGGGCG +
Preference number: 5 (lower is better)
Translates to: ISILLPAVIGDGSGR*GLAEGGCGECTGRA
Trigger: CGCCCTGCCCGTGCACTCTCCGCAGCCGCCCTCCGCCAAGCCCCAGCGCCCGCTCCCATCGCCGATGACCGCGGGGAGGAGGATGGAGAT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244869.3
ENST00000507603.1
CDS CCA 90 bp GCCGGCACAGAGCATCTCCATCCTCCTCCCCGCGGTCATCGGCGATaGGAGCGGGCGCTGGGGCTTGGCGGAGGGCGGCTGCGGAGAGTG +
Preference number: 5 (lower is better)
Translates to: AGTEHLHPPPRGHRR*ERALGLGGGRLRRV
Trigger: CACTCTCCGCAGCCGCCCTCCGCCAAGCCCCAGCGCCCGCTCCCATCGCCGATGACCGCGGGGAGGAGGATGGAGATGCTCTGTGCCGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244869.3
ENST00000507603.1
CDS-3UTR CAA 90 bp GGAGACAAGTCCTGGCACCTGGTGCTCCAGAGGTCAGCCATGGCTTATTATGCCCTCAAGGTTAGGAGATaGAGACCATCCTGGCCAACA +
Preference number: 5 (lower is better)
Translates to: GDKSWHLVLQRSAMAYYALKVRR*RPSWPT
Trigger: TGTTGGCCAGGATGGTCTCAATCTCCTAACCTTGAG...GGCATAATAAGCCATGGCTGACCTCTGGAGCACCAGGTGCCAGGACTTGTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244869.3
CDS-3UTR CAA 90 bp GGAGACAAGTCCTGGCACCTGGTGCTCCAGAGGTCAGCCATGGCTTATTATGCCCTCCCCAGGGTTAGCTaGTTTCAAATGTGTAGTGTT +
Preference number: 5 (lower is better)
Translates to: GDKSWHLVLQRSAMAYYALPRVS*FQMCSV
Trigger: AACACTACACATTTGAAACAAGCTAACCCTGGGGAG...GGCATAATAAGCCATGGCTGACCTCTGGAGCACCAGGTGCCAGGACTTGTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244869.3
CDS TCA 90 bp TATCACTGGACTCTCCTGGGATACATGATGGAATCACAGTTGTACTaGGGACTGCCTGTAGAAGATGGAAACCCAGGCAGAGCAGCAGCG +
Preference number: 5 (lower is better)
Translates to: YHWTLLGYMMESQLY*GLPVEDGNPGRAAA
Trigger: CGCTGCTGCTCTGCCTGGGTTTCCATCTTCTACAGGCAGTCCTCAGTACAACTGTGATTCCATCATGTATCCCAGGAGAGTCCAGTGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244869.3
ENST00000507603.1
CDS-3UTR CAA 90 bp ACAAGTCCTGGCACCTGGTGCTCCAGAGGTCAGCCATGGCTTATTATGCCTTCGACACCTGCAGTAGTTTaGACTCATGTCCACCAGATA +
Preference number: 5 (lower is better)
Translates to: TSPGTWCSRGQPWLIMPSTPAVV*THVHQI
Trigger: TATCTGGTGGACATGAGTCAAAACTACTGCAGGTGT...CGAAGGCATAATAAGCCATGGCTGACCTCTGGAGCACCAGGTGCCAGGACTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244869.3
CDS-3UTR CAA 90 bp GGAGACAAGTCCTGGCACCTGGTGCTCCAGAGGTCAGCCATGGCTTATTATGCCAAAGCCACATATTCTTaGCTTAAAGGTTGGTGGACG +
Preference number: 5 (lower is better)
Translates to: GDKSWHLVLQRSAMAYYAKATYS*LKGWWT
Trigger: CGTCCACCAACCTTTAAGCAAAGAATATGTGGCTTT...GGCATAATAAGCCATGGCTGACCTCTGGAGCACCAGGTGCCAGGACTTGTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244869.3
CDS-3UTR CAA 90 bp ACAAGTCCTGGCACCTGGTGCTCCAGAGGTCAGCCATGGCTTATTATGCCTTCGGCTATGACCTGGGAATaGCTTACTTCTAAGCACTGT +
Preference number: 5 (lower is better)
Translates to: TSPGTWCSRGQPWLIMPSAMTWE*LTSKHC
Trigger: ACAGTGCTTAGAAGTAAGCAATTCCCAGGTCATAGC...CGAAGGCATAATAAGCCATGGCTGACCTCTGGAGCACCAGGTGCCAGGACTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244869.3
CDS-3UTR CAA 90 bp ATACACCAGAAATACTGTTTGTACAAGTCATTACTCCCCCTTCTCCCATATGAATGGCGCCATTCAGACTaGCGGCAACTCTGGATCCCC +
Preference number: 5 (lower is better)
Translates to: IHQKYCLYKSLLPLLPYEWRHSD*RQLWIP
Trigger: GGGGATCCAGAGTTGCCGCAAGTCTGAATGGCGCCA...TTCATATGGGAGAAGGGGGAGTAATGACTTGTACAAACAGTATTTCTGGTGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244869.3
CDS-3UTR CAA 90 bp ACAAGTCCTGGCACCTGGTGCTCCAGAGGTCAGCCATGGCTTATTATGCCTTCGGCATTTGTGGTTGCTTaGGTTCTCAATACATTGAAT +
Preference number: 5 (lower is better)
Translates to: TSPGTWCSRGQPWLIMPSAFVVA*VLNTLN
Trigger: ATTCAATGTATTGAGAACCAAAGCAACCACAAATGC...CGAAGGCATAATAAGCCATGGCTGACCTCTGGAGCACCAGGTGCCAGGACTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000244869.3
CDS GCA 90 bp CCACTTCACACCTGCAGTAGTTTTGACTCATGTCCACCAGATAGATaGACTGTCCATGCAAACAATAGCCATTCATGTCAGAGCTACACT +
Preference number: 5 (lower is better)
Translates to: PLHTCSSFDSCPPDR*TVHANNSHSCQSYT
Trigger: AGTGTAGCTCTGACATGAATGGCTATTGTTTGCATGGACAGTGCATCTATCTGGTGGACATGAGTCAAAACTACTGCAGGTGTGAAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244869.3
CDS GCA 90 bp CACCATCTTGGCAAGTGTGAGAAGCATCAGAAGTCCTCCCTGCTCTaGACCTCTGACATATGTGTGCAATTTAAAAGCTACTATTTACTA +
Preference number: 5 (lower is better)
Translates to: HHLGKCEKHQKSSLL*TSDICVQFKSYYLL
Trigger: TAGTAAATAGTAGCTTTTAAATTGCACACATATGTCAGAGGTGCAGAGCAGGGAGGACTTCTGATGCTTCTCACACTTGCCAAGATGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507603.1
CDS-3UTR CAA 90 bp ATACACCAGAAATACTGTTTGTACAAGTCATTACTCCCCCTTCTCCCATATGAAAGCTACACTTTGTTATaGACACTTGAGCCACACGTG +
Preference number: 5 (lower is better)
Translates to: IHQKYCLYKSLLPLLPYESYTLL*TLEPHV
Trigger: CACGTGTGGCTCAAGTGTCAATAACAAAGTGTAGCT...TTCATATGGGAGAAGGGGGAGTAATGACTTGTACAAACAGTATTTCTGGTGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244869.3
CDS-3UTR CAA 90 bp AACCGTTTACCAAAATGGCTCTTCAAACTTAAAAAGTGCAATTACAGAGTGCAATCCCTGCCCATAAGTTaGATGGCGCCATTCAGACTT +
Preference number: 5 (lower is better)
Translates to: NRLPKWLFKLKKCNYRVQSLPIS*MAPFRL
Trigger: AAGTCTGAATGGCGCCATCAAACTTATGGGCAGGGA...TTGCACTCTGTAATTGCACTTTTTAAGTTTGAAGAGCCATTTTGGTAAACGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244869.3
CDS-3UTR CAA 90 bp AACCGTTTACCAAAATGGCTCTTCAAACTTAAAAAGTGCAATTACAGAGTGCAAATTTTCCGTCCTTGGTaGGTTGAATCCACAGATGTG +
Preference number: 5 (lower is better)
Translates to: NRLPKWLFKLKKCNYRVQIFRPW*VESTDV
Trigger: CACATCTGTGGATTCAACCAACCAAGGACGGAAAAT...TTGCACTCTGTAATTGCACTTTTTAAGTTTGAAGAGCCATTTTGGTAAACGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000244869.3
CDS-3UTR CAA 90 bp AACCGTTTACCAAAATGGCTCTTCAAACTTAAAAAGTGCAATTACAGAGTGCAATGTCAGAGCTACACTTaGTTATTGACACTTGAGCCA +
Preference number: 5 (lower is better)
Translates to: NRLPKWLFKLKKCNYRVQCQSYT*LLTLEP
Trigger: TGGCTCAAGTGTCAATAACAAAGTGTAGCTCTGACA...TTGCACTCTGTAATTGCACTTTTTAAGTTTGAAGAGCCATTTTGGTAAACGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244869.3
CDS-3UTR CAA 90 bp ATACACCAGAAATACTGTTTGTACAAGTCATTACTCCCCCTTCTCCCATATGAAACACAGGACCTATATTaGCTTCTCCCAAATTCTAAT +
Preference number: 5 (lower is better)
Translates to: IHQKYCLYKSLLPLLPYETQDLY*LLPNSN
Trigger: ATTAGAATTTGGGAGAAGCAAATATAGGTCCTGTGT...TTCATATGGGAGAAGGGGGAGTAATGACTTGTACAAACAGTATTTCTGGTGTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000244869.3
CDS-3UTR CAA 90 bp AACCGTTTACCAAAATGGCTCTTCAAACTTAAAAAGTGCAATTACAGAGTGCAACACCAGAAATACTGTTaGTACAAGTCATTACTCCCC +
Preference number: 5 (lower is better)
Translates to: NRLPKWLFKLKKCNYRVQHQKYC*YKSLLP
Trigger: GGGGAGTAATGACTTGTACAAACAGTATTTCTGGTG...TTGCACTCTGTAATTGCACTTTTTAAGTTTGAAGAGCCATTTTGGTAAACGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000244869.3
CDS CCA 72 bp CTCCTCCCCGCGGTCATCGGCGATGGGAGCGGGCGCTaGGGCTTGGCGGAGGGCGGCTGCGGAGAGTGCACG +
Preference number: 6 (lower is better)
Translates to: LLPAVIGDGSGR*GLAEGGCGECT
Trigger: CGTGCACTCTCCGCAGCCGCCCTCCGCCAAGCCCCAGCGCCCGCTCCCATCGCCGATGACCGCGGGGAGGAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244869.3
ENST00000507603.1
CDS CCA 72 bp GAGCATCTCCATCCTCCTCCCCGCGGTCATCGGCGATaGGAGCGGGCGCTGGGGCTTGGCGGAGGGCGGCTG +
Preference number: 6 (lower is better)
Translates to: EHLHPPPRGHRR*ERALGLGGGRL
Trigger: CAGCCGCCCTCCGCCAAGCCCCAGCGCCCGCTCCCATCGCCGATGACCGCGGGGAGGAGGATGGAGATGCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000244869.3
ENST00000507603.1
CDS CCA 72 bp TGGAGAGCGGCTGTCAGCCTAGAAGGGACCCCACGTTaGCTGTGTCCCTCTGACACTGGAAATATCAGGCAA +
Preference number: 6 (lower is better)
Translates to: WRAAVSLEGTPR*LCPSDTGNIRQ
Trigger: TTGCCTGATATTTCCAGTGTCAGAGGGACACAGCCAACGTGGGGTCCCTTCTAGGCTGACAGCCGCTCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000244869.3
CDS GCA 72 bp ACCTGCAGTAGTTTTGACTCATGTCCACCAGATAGATaGACTGTCCATGCAAACAATAGCCATTCATGTCAG +
Preference number: 6 (lower is better)
Translates to: TCSSFDSCPPDR*TVHANNSHSCQ
Trigger: CTGACATGAATGGCTATTGTTTGCATGGACAGTGCATCTATCTGGTGGACATGAGTCAAAACTACTGCAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000244869.3
ENST00000507603.1
CDS CAA 90 bp TGCACTGTCCATGCAAACAATAGCCATTCATGTCAGAGCTACACTTaGTTATTGACACTTGAGCCACACGTGGATTGTCTTCTGTCTGAA +
Preference number: 6 (lower is better)
Translates to: CTVHANNSHSCQSYT*LLTLEPHVDCLLSE
Trigger: TTCAGACAGAAGACAATCCACGTGTGGCTCAAGTGTCAATAACAAAGTGTAGCTCTGACATGAATGGCTATTGTTTGCATGGACAGTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244869.3
ENST00000507603.1
CDS CAA 90 bp GTCCATGCAAACAATAGCCATTCATGTCAGAGCTACACTTTGTTATaGACACTTGAGCCACACGTGGATTGTCTTCTGTCTGAACTAAAG +
Preference number: 6 (lower is better)
Translates to: VHANNSHSCQSYTLL*TLEPHVDCLLSELK
Trigger: CTTTAGTTCAGACAGAAGACAATCCACGTGTGGCTCAAGTGTCAATAACAAAGTGTAGCTCTGACATGAATGGCTATTGTTTGCATGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244869.3
ENST00000507603.1
CDS CCA 72 bp ATCACGGTCAAAGCCACATATTCTTTGCTTAAAGGTTaGTGGACGGTTAAAAAGAAGTGTTCACATCGGACA +
Preference number: 6 (lower is better)
Translates to: ITVKATYSLLKG*WTVKKKCSHRT
Trigger: TGTCCGATGTGAACACTTCTTTTTAACCGTCCACCAACCTTTAAGCAAAGAATATGTGGCTTTGACCGTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000244869.3
ENST00000503689.1
CDS CAA 72 bp AACAATAGCCATTCATGTCAGAGCTACACTTTGTTATaGACACTTGAGCCACACGTGGATTGTCTTCTGTCT +
Preference number: 6 (lower is better)
Translates to: NNSHSCQSYTLL*TLEPHVDCLLS
Trigger: AGACAGAAGACAATCCACGTGTGGCTCAAGTGTCAATAACAAAGTGTAGCTCTGACATGAATGGCTATTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244869.3
ENST00000507603.1
CDS CAA 72 bp CATGCAAACAATAGCCATTCATGTCAGAGCTACACTTaGTTATTGACACTTGAGCCACACGTGGATTGTCTT +
Preference number: 6 (lower is better)
Translates to: HANNSHSCQSYT*LLTLEPHVDCL
Trigger: AAGACAATCCACGTGTGGCTCAAGTGTCAATAACAAAGTGTAGCTCTGACATGAATGGCTATTGTTTGCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244869.3
ENST00000507603.1
CDS CAA 72 bp TGTTTGTTTATTTCTGACATATTACCTGCAGTAGTTTaGACTCATGTCCACCAGATAGATGCACTGTCCATG +
Preference number: 6 (lower is better)
Translates to: CLFISDILPAVV*THVHQIDALSM
Trigger: CATGGACAGTGCATCTATCTGGTGGACATGAGTCAAAACTACTGCAGGTAATATGTCAGAAATAAACAAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507603.1
CDS CAA 90 bp TACAAACTGTGTTTGTTTATTTCTGACATATTACCTGCAGTAGTTTaGACTCATGTCCACCAGATAGATGCACTGTCCATGCAAACAATA +
Preference number: 6 (lower is better)
Translates to: YKLCLFISDILPAVV*THVHQIDALSMQTI
Trigger: TATTGTTTGCATGGACAGTGCATCTATCTGGTGGACATGAGTCAAAACTACTGCAGGTAATATGTCAGAAATAAACAAACACAGTTTGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507603.1
CDS CAA 72 bp AAAATAATAAGAATCACGGTCAAAGCCACATATTCTTaGCTTAAAGGTTGGTGGACGGTTAAAAAGAAGTGT +
Preference number: 6 (lower is better)
Translates to: KIIRITVKATYS*LKGWWTVKKKC
Trigger: ACACTTCTTTTTAACCGTCCACCAACCTTTAAGCAAAGAATATGTGGCTTTGACCGTGATTCTTATTATTTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000244869.3
ENST00000503689.1